Psyllid ID: psy15502

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MFLVTKSWTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR
Secondary Structure (PSIPRED)
cEEEEEEccccEEEEEEEEEEcccccccccccEEcccccEEEEccEEEEEEEccccEEEEcccEEEEEEccccEEEEEEccccEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEccccEEEEEEEEEEEcccccccccccEccccccEEEEcccccEEEEcccccccccccEEEEEEccccccEEEEccccccHccccccccccccc
Coil and Loop (DISEMBL)
mflvtkswtglvteerfsiqiaptklsgpkppifikhssrsihagktvpivrggegtlmeenEFYAIETfgstgkgmvhddmdVSHYMKNFeasyiplr
Flexible Loop (DISEMBL)
mflvtkswtglvteerfsiqiaptklsgpkppifikhssrsihagktvpivrggegtLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKnfeasyiplr
Low Complexity Region (SEG)
MFLVTKSWTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR
Disordered region (IsUnstruct)
**LVTKSWTGLVTEERFSIQIAPTKL*****PIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF********
Disordered Region (DISOPRED)
*FLVT**WTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPL*
Disordered Region (DISEMBL)
MFLVTKSWTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR
Disordered Region (DISPRO)
MFLVTKSWTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASY****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFLVTKSWTGLVTEERFSIQIAPTKLSGPKPPIFIKHSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
P38062	478	Methionine aminopeptidase	yes	N/A	0.585	0.121	0.758	4e-22
O08663	478	Methionine aminopeptidase	yes	N/A	0.585	0.121	0.758	4e-22
P50579	478	Methionine aminopeptidase	yes	N/A	0.585	0.121	0.758	5e-22
Q3ZC89	477	Methionine aminopeptidase	yes	N/A	0.585	0.121	0.758	5e-22
Q56Y85	439	Methionine aminopeptidase	yes	N/A	0.595	0.134	0.728	2e-20
P50581	182	Putative uncharacterized	no	N/A	0.585	0.318	0.75	2e-19
Q9FV49	441	Methionine aminopeptidase	no	N/A	0.585	0.131	0.672	9e-18
O60085	426	Methionine aminopeptidase	yes	N/A	0.585	0.136	0.655	1e-16
C5P8Q4	452	Methionine aminopeptidase	N/A	N/A	0.555	0.121	0.690	3e-15
Q0UTI9	435	Methionine aminopeptidase	N/A	N/A	0.595	0.135	0.644	4e-15

>sp|P38062|AMPM2_RAT Methionine aminopeptidase 2 OS=Rattus norvegicus GN=Metap2 PE=1 SV=2

 Score =  103 bits (256), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.
Rattus norvegicus (taxid: 10116)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 8

>sp|O08663|AMPM2_MOUSE Methionine aminopeptidase 2 OS=Mus musculus GN=Metap2 PE=1 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|P50579|AMPM2_HUMAN Methionine aminopeptidase 2 OS=Homo sapiens GN=METAP2 PE=1 SV=1

 Score =  103 bits (256), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q3ZC89|AMPM2_BOVIN Methionine aminopeptidase 2 OS=Bos taurus GN=METAP2 PE=2 SV=1

 Score =  103 bits (256), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 337 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 394

Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q56Y85|AMP2B_ARATH Methionine aminopeptidase 2B OS=Arabidopsis thaliana GN=MAP2B PE=2 SV=2

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/59 (72%), Positives = 51/59 (86%)

Query: 41  SIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
            IHAGK+VPIV+GGE T MEE EFYAIETFGSTGKG V +D++ SHYMKNF+A ++PLR
Sbjct: 298 QIHAGKSVPIVKGGEQTKMEEGEFYAIETFGSTGKGYVREDLECSHYMKNFDAGHVPLR 356

Removes the N-terminal methionine from nascent proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|P50581|YD43_CAEEL Putative uncharacterized protein T27A8.3 OS=Caenorhabditis elegans GN=T27A8.3 PE=5 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/60 (75%), Positives = 48/60 (80%), Gaps = 2/60 (3%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEAS--YIPLR 99
           IH GKTVPIV+GGE   MEENE YAIETFGSTGKG  HDDM+ SHYMKNFE +   IPLR
Sbjct: 53  IHTGKTVPIVKGGEQARMEENEIYAIETFGSTGKGYFHDDMETSHYMKNFELADEKIPLR 112

Caenorhabditis elegans (taxid: 6239)

>sp|Q9FV49|AMP2A_ARATH Methionine aminopeptidase 2A OS=Arabidopsis thaliana GN=MAP2A PE=2 SV=2

 Score = 89.0 bits (219), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/58 (67%), Positives = 47/58 (81%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHA K+VP VRGGE T MEE E YAIETFGSTGKG V +D++ SHYMKN++  ++PLR
Sbjct: 301 IHAEKSVPNVRGGEQTKMEEGELYAIETFGSTGKGYVREDLECSHYMKNYDVGHVPLR 358

Removes the N-terminal methionine from nascent proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|O60085|AMPM2_SCHPO Methionine aminopeptidase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fma2 PE=3 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/58 (65%), Positives = 47/58 (81%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IH GK+VPIV+GGE   MEE E +AIETFGSTG+G+VH+DM+ SHY K  +A +IPLR
Sbjct: 286 IHGGKSVPIVKGGEEIKMEEGEIFAIETFGSTGRGVVHEDMECSHYAKIPDAGHIPLR 343

Removes the N-terminal methionine from nascent proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|C5P8Q4|AMPM2_COCP7 Methionine aminopeptidase 2 homolog CPC735_002850 OS=Coccidioides posadasii (strain C735) GN=CPC735_002850 PE=3 SV=2

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 44/55 (80%)

Query: 45  GKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           GK+VPIV+GG+ T MEE E YAIETFGSTGKG V DDM+VSHY K  +A  +PLR
Sbjct: 315 GKSVPIVKGGDQTKMEEGETYAIETFGSTGKGFVRDDMEVSHYAKVPDAPNVPLR 369

Removes the N-terminal methionine from nascent proteins.

Coccidioides posadasii (strain C735) (taxid: 222929)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

>sp|Q0UTI9|AMPM2_PHANO Methionine aminopeptidase 2 homolog SNOG_04925 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_04925 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 45/59 (76%)

Query: 41  SIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           +IH GKTVPIV+GG+ T MEE E +AIETFGSTGKG V DDM+ SHY K  +A  + LR
Sbjct: 305 TIHGGKTVPIVKGGDQTKMEEGETFAIETFGSTGKGYVRDDMETSHYAKRSDAPKVALR 363

Removes the N-terminal methionine from nascent proteins.

Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (taxid: 321614)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
91093244	459	PREDICTED: similar to methionine aminope	0.626	0.135	0.822	1e-24
332376979	462	unknown [Dendroctonus ponderosae]	0.626	0.134	0.806	6e-24
358343277	467	Methionine aminopeptidase [Medicago trun	0.626	0.132	0.790	1e-23
449677228	422	PREDICTED: methionine aminopeptidase 2-l	0.585	0.137	0.827	4e-23
170073842	462	methionine aminopeptidase 2 [Culex quinq	0.626	0.134	0.790	7e-23
157107323	499	methionine aminopeptidase [Aedes aegypti	0.626	0.124	0.774	8e-23
170052048	498	methionine aminopeptidase 2 [Culex quinq	0.626	0.124	0.790	8e-23
307208555	469	Methionine aminopeptidase 2 [Harpegnatho	0.585	0.123	0.827	8e-23
312374774	505	hypothetical protein AND_15530 [Anophele	0.626	0.122	0.790	1e-22
193643525	469	PREDICTED: methionine aminopeptidase 2-l	0.585	0.123	0.810	1e-22

>gi|91093244|ref|XP_969150.1| PREDICTED: similar to methionine aminopeptidase [Tribolium castaneum] gi|270016683|gb|EFA13129.1| hypothetical protein TcasGA2_TC006844 [Tribolium castaneum]

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/62 (82%), Positives = 57/62 (91%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IHAGKTVPIV+GGE T+MEENEFYAIETFGSTG+G+VHDDMD SHYMKNFE+SY+P
Sbjct: 315 SPYRIHAGKTVPIVKGGEATVMEENEFYAIETFGSTGRGVVHDDMDCSHYMKNFESSYVP 374

Query: 98  LR 99
           LR
Sbjct: 375 LR 376

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332376979|gb|AEE63629.1| unknown [Dendroctonus ponderosae]

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/62 (80%), Positives = 55/62 (88%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IHAGKTVPIV+GGE T+MEENEFYAIETFGSTGKG+VHDDMD SHYMKNF+  Y+P
Sbjct: 318 SPYRIHAGKTVPIVKGGEATVMEENEFYAIETFGSTGKGVVHDDMDCSHYMKNFDVPYVP 377

Query: 98  LR 99
           LR
Sbjct: 378 LR 379

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|358343277|ref|XP_003635731.1| Methionine aminopeptidase [Medicago truncatula] gi|355501666|gb|AES82869.1| Methionine aminopeptidase [Medicago truncatula]

 Score =  114 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 55/62 (88%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IHAGKTVPIV+GGE T+MEENE+YAIETFGSTG+G VHDDMD SHYMKNF+A Y+P
Sbjct: 323 SPYRIHAGKTVPIVKGGEATVMEENEYYAIETFGSTGRGQVHDDMDCSHYMKNFDAGYMP 382

Query: 98  LR 99
           LR
Sbjct: 383 LR 384

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449677228|ref|XP_002169857.2| PREDICTED: methionine aminopeptidase 2-like, partial [Hydra magnipapillata]

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/58 (82%), Positives = 54/58 (93%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T+MEE+EFYAIETFGSTGKG+VHDDM+ SHYMKNFE  +IPLR
Sbjct: 282 IHAGKTVPIVKGGEATVMEEDEFYAIETFGSTGKGVVHDDMECSHYMKNFEVGHIPLR 339

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|170073842|ref|XP_001870451.1| methionine aminopeptidase 2 [Culex quinquefasciatus] gi|167870551|gb|EDS33934.1| methionine aminopeptidase 2 [Culex quinquefasciatus]

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 55/62 (88%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IH+GKTVPIV+GGE T MEENEFYAIETFGSTG+G+VHDDMD SHYMKNFEA ++P
Sbjct: 318 SPYRIHSGKTVPIVKGGETTRMEENEFYAIETFGSTGRGIVHDDMDCSHYMKNFEAPFVP 377

Query: 98  LR 99
           LR
Sbjct: 378 LR 379

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107323|ref|XP_001649726.1| methionine aminopeptidase [Aedes aegypti] gi|108879603|gb|EAT43828.1| AAEL004738-PA [Aedes aegypti]

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/62 (77%), Positives = 55/62 (88%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IH+GKTVPIV+GGE T MEENEFYAIETFGSTG+GMVHDDMD SHYMKNF+A ++P
Sbjct: 355 SPYRIHSGKTVPIVKGGETTRMEENEFYAIETFGSTGRGMVHDDMDCSHYMKNFDAPFVP 414

Query: 98  LR 99
           +R
Sbjct: 415 MR 416

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170052048|ref|XP_001862044.1| methionine aminopeptidase 2 [Culex quinquefasciatus] gi|167873069|gb|EDS36452.1| methionine aminopeptidase 2 [Culex quinquefasciatus]

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 55/62 (88%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IH+GKTVPIV+GGE T MEENEFYAIETFGSTG+G+VHDDMD SHYMKNFEA ++P
Sbjct: 354 SPYRIHSGKTVPIVKGGETTRMEENEFYAIETFGSTGRGIVHDDMDCSHYMKNFEAPFVP 413

Query: 98  LR 99
           LR
Sbjct: 414 LR 415

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208555|gb|EFN85894.1| Methionine aminopeptidase 2 [Harpegnathos saltator]

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/58 (82%), Positives = 54/58 (93%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIVRGGE T MEENEFYAIETFGSTGKG+VHDDM+ SHYMK+F+A ++PLR
Sbjct: 329 IHAGKTVPIVRGGEATRMEENEFYAIETFGSTGKGVVHDDMECSHYMKSFDAGFVPLR 386

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374774|gb|EFR22259.1| hypothetical protein AND_15530 [Anopheles darlingi]

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/62 (79%), Positives = 54/62 (87%)

Query: 38  SSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIP 97
           S   IHAGKTVPIV+GGE T MEENEFYAIETFGSTG+G+VHDDMD SHYMKNF+A  +P
Sbjct: 361 SPYRIHAGKTVPIVKGGETTRMEENEFYAIETFGSTGRGLVHDDMDCSHYMKNFDAPMVP 420

Query: 98  LR 99
           LR
Sbjct: 421 LR 422

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193643525|ref|XP_001945885.1| PREDICTED: methionine aminopeptidase 2-like [Acyrthosiphon pisum]

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/58 (81%), Positives = 54/58 (93%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T+MEENEFYAIETFGSTG+G+V DDMD SHYMKNF+A ++PLR
Sbjct: 329 IHAGKTVPIVKGGEATMMEENEFYAIETFGSTGRGIVRDDMDTSHYMKNFDAPFVPLR 386

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
FB|FBgn0025117	448	und "uninitiated" [Drosophila	0.585	0.129	0.793	7.6e-22
ZFIN|ZDB-GENE-030131-2172	476	metap2b "methionyl aminopeptid	0.585	0.121	0.793	2.7e-21
ZFIN|ZDB-GENE-061013-5	468	metap2a "methionyl aminopeptid	0.585	0.123	0.775	5.5e-21
UNIPROTKB|F8VRR3	442	METAP2 "Methionine aminopeptid	0.585	0.131	0.758	1.2e-20
RGD|1560341	442	RGD1560341 "similar to Methion	0.585	0.131	0.758	1.2e-20
UNIPROTKB|Q6IRK1	442	RGD1560341 "Methionine aminope	0.585	0.131	0.758	1.2e-20
UNIPROTKB|B4DUX5	455	METAP2 "Methionine aminopeptid	0.585	0.127	0.758	1.4e-20
UNIPROTKB|G3XA91	455	METAP2 "Methionine aminopeptid	0.585	0.127	0.758	1.4e-20
UNIPROTKB|F1N4Q2	477	METAP2 "Methionine aminopeptid	0.585	0.121	0.758	1.6e-20
UNIPROTKB|Q3ZC89	477	METAP2 "Methionine aminopeptid	0.585	0.121	0.758	1.6e-20

FB|FBgn0025117 und "uninitiated" [Drosophila melanogaster (taxid:7227)]

 Score = 259 (96.2 bits), Expect = 7.6e-22, P = 7.6e-22
 Identities = 46/58 (79%), Positives = 53/58 (91%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE+EFYAIETFGSTG+G+VHDDMD SHYMKNF+  ++PLR
Sbjct:   308 IHAGKTVPIVKGGESTRMEEDEFYAIETFGSTGRGLVHDDMDCSHYMKNFDLPFVPLR 365

GO:0004177 "aminopeptidase activity" evidence=ISS;NAS

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

ZFIN|ZDB-GENE-030131-2172 metap2b "methionyl aminopeptidase 2b" [Danio rerio (taxid:7955)]

 Score = 255 (94.8 bits), Expect = 2.7e-21, P = 2.7e-21
 Identities = 46/58 (79%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKGMVHDDM+ SHYMKNFE  ++P+R
Sbjct:   336 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGMVHDDMECSHYMKNFEVGHVPIR 393

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IGI;IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

ZFIN|ZDB-GENE-061013-5 metap2a "methionyl aminopeptidase 2a" [Danio rerio (taxid:7955)]

 Score = 252 (93.8 bits), Expect = 5.5e-21, P = 5.5e-21
 Identities = 45/58 (77%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDMD SHYMKNF+  ++P+R
Sbjct:   328 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMDCSHYMKNFDVGHVPIR 385

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

UNIPROTKB|F8VRR3 METAP2 "Methionine aminopeptidase" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   302 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 359

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1560341 RGD1560341 "similar to Methionine aminopeptidase 2 (MetAP 2)" [Rattus norvegicus (taxid:10116)]

 Score = 248 (92.4 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   302 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 359

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q6IRK1 RGD1560341 "Methionine aminopeptidase" [Rattus norvegicus (taxid:10116)]

 Score = 248 (92.4 bits), Expect = 1.2e-20, P = 1.2e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   302 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 359

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|B4DUX5 METAP2 "Methionine aminopeptidase" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 1.4e-20, P = 1.4e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   315 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 372

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G3XA91 METAP2 "Methionine aminopeptidase" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 1.4e-20, P = 1.4e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   315 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 372

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N4Q2 METAP2 "Methionine aminopeptidase" [Bos taurus (taxid:9913)]

 Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   337 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 394

GO:0031365 "N-terminal protein amino acid modification" evidence=IEA

GO:0018206 "peptidyl-methionine modification" evidence=IEA

GO:0016485 "protein processing" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|Q3ZC89 METAP2 "Methionine aminopeptidase 2" [Bos taurus (taxid:9913)]

 Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query:    42 IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
             IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct:   337 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 394

GO:0005737 "cytoplasm" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0009987 "cellular process" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B6HTQ4	AMP2A_PENCW	3, ., 4, ., 1, 1, ., 1, 8	0.5689	0.5858	0.1321	yes	N/A
Q5B4X6	AMP2A_EMENI	3, ., 4, ., 1, 1, ., 1, 8	0.6034	0.5858	0.1294	yes	N/A
Q6CP80	AMPM2_KLULA	3, ., 4, ., 1, 1, ., 1, 8	0.6326	0.4949	0.1172	yes	N/A
Q4WNT9	AMP2A_ASPFU	3, ., 4, ., 1, 1, ., 1, 8	0.6034	0.5858	0.1228	yes	N/A
A2QHX0	AMP2A_ASPNC	3, ., 4, ., 1, 1, ., 1, 8	0.6206	0.5858	0.1345	yes	N/A
Q3ZC89	AMPM2_BOVIN	3, ., 4, ., 1, 1, ., 1, 8	0.7586	0.5858	0.1215	yes	N/A
O60085	AMPM2_SCHPO	3, ., 4, ., 1, 1, ., 1, 8	0.6551	0.5858	0.1361	yes	N/A
P50579	AMPM2_HUMAN	3, ., 4, ., 1, 1, ., 1, 8	0.7586	0.5858	0.1213	yes	N/A
Q6CA79	AMPM2_YARLI	3, ., 4, ., 1, 1, ., 1, 8	0.5689	0.5858	0.1231	yes	N/A
Q56Y85	AMP2B_ARATH	3, ., 4, ., 1, 1, ., 1, 8	0.7288	0.5959	0.1343	yes	N/A
Q55C21	AMPM2_DICDI	3, ., 4, ., 1, 1, ., 1, 8	0.7090	0.5353	0.1215	yes	N/A
B2B738	AMPM2_PODAN	3, ., 4, ., 1, 1, ., 1, 8	0.5254	0.5959	0.1325	yes	N/A
C5DE35	AMPM2_LACTC	3, ., 4, ., 1, 1, ., 1, 8	0.5892	0.5656	0.1333	yes	N/A
O08663	AMPM2_MOUSE	3, ., 4, ., 1, 1, ., 1, 8	0.7586	0.5858	0.1213	yes	N/A
P38062	AMPM2_RAT	3, ., 4, ., 1, 1, ., 1, 8	0.7586	0.5858	0.1213	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	99
PTZ00053	470	PTZ00053, PTZ00053, methionine aminopeptidase 2; P	7e-32
cd01088	291	cd01088, MetAP2, Methionine Aminopeptidase 2	2e-25
TIGR00501	295	TIGR00501, met_pdase_II, methionine aminopeptidase	2e-10
PRK08671	291	PRK08671, PRK08671, methionine aminopeptidase; Pro	2e-07
COG0024	255	COG0024, Map, Methionine aminopeptidase [Translati	3e-06

>gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional

 Score =  115 bits (289), Expect = 7e-32
 Identities = 36/58 (62%), Positives = 47/58 (81%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IH GK+VPIV+GGE T MEE E +AIETF STG+G V++D++ SHYMK+  A ++PLR
Sbjct: 330 IHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLR 387

Length = 470

>gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2

 Score = 95.8 bits (239), Expect = 2e-25
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           +HAGK++P V+GGEGT +EE + YAIE F +TGKG VHD  + S YM N +    PLR
Sbjct: 158 LHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDK---PLR 212

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides. Length = 291

>gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II

 Score = 54.8 bits (132), Expect = 2e-10
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHY 87
           +H GK++P V+  + T +EE +  AIE F + G G V D  +VS Y
Sbjct: 162 LHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIY 207

Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation [Protein fate, Protein modification and repair]. Length = 295

>gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYM 88
           +HAG ++P    G G  +EE + YAIE F + G+G V +  +V  Y 
Sbjct: 159 LHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205

Length = 291

>gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 34  FIKHS-SRSIHAGKTVPIV-RGGEGTLMEENEFYAIETFGSTGKGMVHDDMD 83
              H   R +H   ++P   + G G  ++E   +AIE   +TG G V +   
Sbjct: 168 LTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPS 219

Length = 255

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
KOG2775|consensus	397		99.92
PTZ00053	470	methionine aminopeptidase 2; Provisional	99.77
COG0024	255	Map Methionine aminopeptidase [Translation, riboso	99.6
cd01088	291	MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18	99.57
TIGR00501	295	met_pdase_II methionine aminopeptidase, type II. M	99.55
PRK08671	291	methionine aminopeptidase; Provisional	99.54
TIGR00495	389	crvDNA_42K 42K curved DNA binding protein. Protein	99.31
PLN03158	396	methionine aminopeptidase; Provisional	98.69
KOG2738|consensus	369		98.66
PRK07281	286	methionine aminopeptidase; Reviewed	98.43
PRK12897	248	methionine aminopeptidase; Reviewed	98.39
TIGR00500	247	met_pdase_I methionine aminopeptidase, type I. Met	98.38
PRK05716	252	methionine aminopeptidase; Validated	98.35
PRK12896	255	methionine aminopeptidase; Reviewed	98.34
PRK12318	291	methionine aminopeptidase; Provisional	98.32
cd01085	224	APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also	98.08
cd01086	238	MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18	97.94
PRK09795	361	aminopeptidase; Provisional	97.28
cd01090	228	Creatinase Creatine amidinohydrolase. E.C.3.5.3.3.	97.27
cd01092	208	APP-like Similar to Prolidase and Aminopeptidase P	97.2
cd01087	243	Prolidase Prolidase. E.C. 3.4.13.9. Also known as	97.14
PF00557	207	Peptidase_M24: Metallopeptidase family M24 This Pr	97.03
cd01066	207	APP_MetAP A family including aminopeptidase P, ami	96.65
PRK15173	323	peptidase; Provisional	96.4
PRK14576	405	putative endopeptidase; Provisional	95.95
PRK10879	438	proline aminopeptidase P II; Provisional	95.91
cd01091	243	CDC68-like Related to aminopeptidase P and aminope	95.77
PRK14575	406	putative peptidase; Provisional	95.71
COG0006	384	PepP Xaa-Pro aminopeptidase [Amino acid transport	95.2
TIGR02993	391	ectoine_eutD ectoine utilization protein EutD. Mem	94.11
PRK13607	443	proline dipeptidase; Provisional	91.12
cd01089	228	PA2G4-like Related to aminopepdidase M, this famil	90.72

>KOG2775|consensus

Probab=99.92  E-value=8.2e-26  Score=184.30  Aligned_cols=84  Identities=57%  Similarity=0.892  Sum_probs=82.7

Q ss_pred             eeeEEEEecceeeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeee
Q psy15502         14 EERFSIQIAPTKLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMK   89 (99)
Q Consensus        14 ~~~~~~~~~~~~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~   89 (99)
                      ||||+|||||++.  ++++||||+|    +|.||+|++||+++.+..++|+||++||||+|++||+|+|+++.+||||++
T Consensus       227 meSyEvEi~Gk~~--~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymk  304 (397)
T KOG2775|consen  227 MESYEVEINGKTY--QVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMK  304 (397)
T ss_pred             hhheEEEeCCcee--cceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhh
Confidence            8999999999988  9999999999    999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCC
Q psy15502         90 NFEASYIPLR   99 (99)
Q Consensus        90 ~~~~~~~~~~   99 (99)
                      |.+..++|||
T Consensus       305 n~~~~~vplr  314 (397)
T KOG2775|consen  305 NFELGHVPLR  314 (397)
T ss_pred             hccccccccc
Confidence            9999999997

>PTZ00053 methionine aminopeptidase 2; Provisional

Probab=99.77  E-value=2e-19  Score=150.91  Aligned_cols=84  Identities=48%  Similarity=0.800  Sum_probs=78.0

Q ss_pred             eeeEEEEecceeeeCCccceeeccc---c-cccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeee
Q psy15502         14 EERFSIQIAPTKLSGPKPPIFIKHS---S-RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMK   89 (99)
Q Consensus        14 ~~~~~~~~~~~~~s~~~~vVrnl~G---g-y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~   89 (99)
                      +++|.++|||+.+  |+++|++++|   | |.+|++|+|||+..++..+|++|||||||||+|+|.|+|.++.+|+||++
T Consensus       300 ies~G~e~~Gk~f--~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~  377 (470)
T PTZ00053        300 IESYEVEIKGKTY--PIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMK  377 (470)
T ss_pred             HHHcCCcccCccc--ccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeE
Confidence            6789999999987  9999999998   4 79999999999988888999999999999999999999999999999999


Q ss_pred             ccCCCCCCCC
Q psy15502         90 NFEASYIPLR   99 (99)
Q Consensus        90 ~~~~~~~~~~   99 (99)
                      +.+...+|||
T Consensus       378 ~~~~~~~~lk  387 (470)
T PTZ00053        378 DPGAEFVPLR  387 (470)
T ss_pred             cCcCCcCCCC
Confidence            9888766775

>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]

Probab=99.60  E-value=7.1e-16  Score=121.26  Aligned_cols=57  Identities=25%  Similarity=0.324  Sum_probs=51.7

Q ss_pred             eCCccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEEeCCc
Q psy15502         27 SGPKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVHDDMD   83 (99)
Q Consensus        27 s~~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~   83 (99)
                      +++++|||||+|   |..+|++|+||||.. +.+.+|+||||||||||+|+|.+.+...+.
T Consensus       159 ~~G~~vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~  219 (255)
T COG0024         159 SRGFSVVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPS  219 (255)
T ss_pred             HcCCEEeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCC
Confidence            678999999999   789999999999955 667999999999999999999999888773

>cd01088 MetAP2 Methionine Aminopeptidase 2

Probab=99.57  E-value=4.1e-15  Score=115.87  Aligned_cols=70  Identities=46%  Similarity=0.648  Sum_probs=62.9

Q ss_pred             eeeeCCccceeeccc---c-cccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeeccCC
Q psy15502         24 TKLSGPKPPIFIKHS---S-RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEA   93 (99)
Q Consensus        24 ~~~s~~~~vVrnl~G---g-y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~~~   93 (99)
                      .+-+++++++++++|   | |.+|++|+|||+..+.+..|++|||||||||+++|.|+|.++..++||+++.+.
T Consensus       136 ~i~~~G~~~~~~~~GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~  209 (291)
T cd01088         136 VIESYGFKPIRNLTGHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDK  209 (291)
T ss_pred             HHHHcCCEEeecCCccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCC
Confidence            344567888999998   5 899999999999887889999999999999999999999999999999997665

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.

>TIGR00501 met_pdase_II methionine aminopeptidase, type II

Probab=99.55  E-value=8.4e-15  Score=114.67  Aligned_cols=68  Identities=34%  Similarity=0.402  Sum_probs=61.3

Q ss_pred             eeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeeccC
Q psy15502         25 KLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFE   92 (99)
Q Consensus        25 ~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~~   92 (99)
                      .-+++++++++++|    +|.+|++++|||+..++..+|++|||||||||+++|.|.|.+.+.++||++...
T Consensus       141 i~~~G~~~i~~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~  212 (295)
T TIGR00501       141 IESYGVKPISNLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAE  212 (295)
T ss_pred             HHHcCCeeecCCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCC
Confidence            34567888899998    589999999999988888999999999999999999999999999999998654

Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.

>PRK08671 methionine aminopeptidase; Provisional

Probab=99.54  E-value=9.2e-15  Score=113.89  Aligned_cols=68  Identities=32%  Similarity=0.417  Sum_probs=61.1

Q ss_pred             eeeeCCccceeeccc---c-cccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeecc
Q psy15502         24 TKLSGPKPPIFIKHS---S-RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF   91 (99)
Q Consensus        24 ~~~s~~~~vVrnl~G---g-y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~   91 (99)
                      ..-+++++++++++|   | |.+|++|+|||+..+++..|+||||||||||+++|.|.|+++..++||+++.
T Consensus       137 vi~~~G~~~~~~~~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~  208 (291)
T PRK08671        137 TIRSYGFKPIRNLTGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLR  208 (291)
T ss_pred             HHHHcCCcccCCCcccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecC
Confidence            344667888889988   4 7999999999998888999999999999999999999999999999999854

>TIGR00495 crvDNA_42K 42K curved DNA binding protein

Probab=99.31  E-value=3e-12  Score=104.55  Aligned_cols=69  Identities=25%  Similarity=0.259  Sum_probs=57.0

Q ss_pred             eeeCCccceeeccc----ccccccCcee-eeeeC-----CCCeEeecCcEEEEeEeeeCCcceEEeCC-ceeeeeeccCC
Q psy15502         25 KLSGPKPPIFIKHS----SRSIHAGKTV-PIVRG-----GEGTLMEENEFYAIETFGSTGKGMVHDDM-DVSHYMKNFEA   93 (99)
Q Consensus        25 ~~s~~~~vVrnl~G----gy~lHegPsI-PN~~~-----g~~~~L~eGmV~AIEPF~TtG~g~V~~~~-~~~iy~~~~~~   93 (99)
                      .-++++++|+|++|    +|.+|++|+| ||+..     ..+.+|++|||||||||+|+|.|++++.. .++||+++...
T Consensus       175 ~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~~~~~~  254 (389)
T TIGR00495       175 AHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYKRDPSK  254 (389)
T ss_pred             HHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEEECCCC
Confidence            44678999999998    5555559985 77642     45789999999999999999999999998 59999987654

Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.

>PLN03158 methionine aminopeptidase; Provisional

Probab=98.69  E-value=1.2e-08  Score=84.01  Aligned_cols=50  Identities=12%  Similarity=0.123  Sum_probs=42.5

Q ss_pred             eCCccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcc
Q psy15502         27 SGPKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKG   76 (99)
Q Consensus        27 s~~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g   76 (99)
                      +.++.+++++.|   |..+|+.|+||+|.. .....|++||||+||||++.|..
T Consensus       289 ~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~  342 (396)
T PLN03158        289 MSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVW  342 (396)
T ss_pred             HcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcc
Confidence            346778999987   999999999999954 56679999999999999997754

>KOG2738|consensus

Probab=98.66  E-value=1.6e-08  Score=83.17  Aligned_cols=51  Identities=14%  Similarity=0.134  Sum_probs=45.5

Q ss_pred             CCccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceE
Q psy15502         28 GPKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMV   78 (99)
Q Consensus        28 ~~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V   78 (99)
                      .+++|||.|+|   +.-+|.+|.||+|.+ ..-..|++||+|+||||+|.|...-
T Consensus       269 ~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d  323 (369)
T KOG2738|consen  269 NGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWED  323 (369)
T ss_pred             cCceeehhhhccccccccccCCCchhhcccCCcceeecCceEEeeeeeccccccc
Confidence            47899999998   999999999999955 5667999999999999999998763

>PRK07281 methionine aminopeptidase; Reviewed

Probab=98.43  E-value=1.7e-07  Score=73.82  Aligned_cols=48  Identities=21%  Similarity=0.182  Sum_probs=40.3

Q ss_pred             ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcce
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGM   77 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~   77 (99)
                      +..++++.|   |..+|+.|.||++. .+....|++||||+|||++..|.+.
T Consensus       190 ~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~  241 (286)
T PRK07281        190 YGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE  241 (286)
T ss_pred             CccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence            344667777   99999999999984 5788899999999999999887554

>PRK12897 methionine aminopeptidase; Reviewed

Probab=98.39  E-value=2.4e-07  Score=70.02  Aligned_cols=48  Identities=17%  Similarity=0.138  Sum_probs=39.5

Q ss_pred             Cccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcc
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKG   76 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g   76 (99)
                      ++...++++|   |..+|+.|.++++. .++...|++||||+|||++..|..
T Consensus       158 g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~  209 (248)
T PRK12897        158 GFSVARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMR  209 (248)
T ss_pred             CCccCCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCC
Confidence            4455567777   99999999999874 477889999999999999996543

>TIGR00500 met_pdase_I methionine aminopeptidase, type I

Probab=98.38  E-value=5e-07  Score=67.51  Aligned_cols=49  Identities=16%  Similarity=0.197  Sum_probs=40.0

Q ss_pred             ceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         32 PIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        32 vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      ..++++|   |..+|+.|.+||+. .+++..|++||||+|||++..|.+.+..
T Consensus       160 ~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~  212 (247)
T TIGR00500       160 VVREYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITT  212 (247)
T ss_pred             eccCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEE
Confidence            3455666   99999999999985 4678999999999999999987665444

Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.

>PRK05716 methionine aminopeptidase; Validated

Probab=98.35  E-value=5.8e-07  Score=67.04  Aligned_cols=49  Identities=22%  Similarity=0.376  Sum_probs=39.9

Q ss_pred             ceeeccc---ccccccCceeeee-eCCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         32 PIFIKHS---SRSIHAGKTVPIV-RGGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        32 vVrnl~G---gy~lHegPsIPN~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      ..+++.|   |..+|+.|.++++ ..+++..|+|||||+|||++..|.+.+..
T Consensus       162 ~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~  214 (252)
T PRK05716        162 VVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKT  214 (252)
T ss_pred             eecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEE
Confidence            3455666   9999999999998 45788999999999999999986655443

>PRK12896 methionine aminopeptidase; Reviewed

Probab=98.34  E-value=5.5e-07  Score=67.26  Aligned_cols=51  Identities=18%  Similarity=0.074  Sum_probs=39.7

Q ss_pred             ceeeccc---ccccccCceee-ee-eCCCCeEeecCcEEEEeEeeeCCcceEEeCC
Q psy15502         32 PIFIKHS---SRSIHAGKTVP-IV-RGGEGTLMEENEFYAIETFGSTGKGMVHDDM   82 (99)
Q Consensus        32 vVrnl~G---gy~lHegPsIP-N~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~   82 (99)
                      ..+++.|   |..+|+.|.+. ++ ..+++..|++||||+|||+++.|..++....
T Consensus       167 ~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~  222 (255)
T PRK12896        167 VVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLD  222 (255)
T ss_pred             eccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcC
Confidence            3456666   88999999554 44 3467889999999999999999988766543

>PRK12318 methionine aminopeptidase; Provisional

Probab=98.32  E-value=3.7e-07  Score=71.70  Aligned_cols=45  Identities=16%  Similarity=0.138  Sum_probs=38.2

Q ss_pred             ccceeeccc---ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTG   74 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG   74 (99)
                      +.+++.+.|   |..+||.|.|+++.+++...|++||||+|||++..+
T Consensus       200 ~~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~  247 (291)
T PRK12318        200 FSVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVG  247 (291)
T ss_pred             CccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcC
Confidence            344456666   999999999999877778899999999999999865

>cd01085 APP X-Prolyl Aminopeptidase 2

Probab=98.08  E-value=3.5e-06  Score=63.67  Aligned_cols=43  Identities=12%  Similarity=-0.004  Sum_probs=33.9

Q ss_pred             cccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEeCCc
Q psy15502         40 RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHDDMD   83 (99)
Q Consensus        40 y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~~~~   83 (99)
                      ..+||.|.++ +..++...|++||||+|||++. .|.+-|+....
T Consensus       168 l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~  211 (224)
T cd01085         168 LNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENL  211 (224)
T ss_pred             CcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEE
Confidence            5889999987 5556778999999999999998 56665554443

E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.

>cd01086 MetAP1 Methionine Aminopeptidase 1

Probab=97.94  E-value=1.7e-05  Score=58.73  Aligned_cols=48  Identities=21%  Similarity=0.272  Sum_probs=37.8

Q ss_pred             eeeccc---ccccccCceeeee-eCCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         33 IFIKHS---SRSIHAGKTVPIV-RGGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        33 Vrnl~G---gy~lHegPsIPN~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      .+++.|   |..+|+.|.++++ ..+.+..|++||||+|||++..|.+.+..
T Consensus       153 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~  204 (238)
T cd01086         153 VREFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVT  204 (238)
T ss_pred             ecCccccCCCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEE
Confidence            445566   8899999999866 45778899999999999999876544333

E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.

>PRK09795 aminopeptidase; Provisional

Probab=97.28  E-value=0.00028  Score=56.03  Aligned_cols=39  Identities=15%  Similarity=0.159  Sum_probs=30.4

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD   80 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~   80 (99)
                      |+.+|+.|.|   ..++...|++||||+|||.+. .|.+-|+.
T Consensus       295 Gl~~he~p~i---~~~~~~~l~~gmv~~iEpgiy~~~~~gvri  334 (361)
T PRK09795        295 GIEVHEDPRF---SPRDTTTLQPGMLLTVEPGIYLPGQGGVRI  334 (361)
T ss_pred             CccccCCCCc---CCCCCCCcCCCCEEEECCEEEeCCCCEEEE
Confidence            8999998865   456778999999999999986 45444444

>cd01090 Creatinase Creatine amidinohydrolase

Probab=97.27  E-value=0.00029  Score=53.08  Aligned_cols=35  Identities=14%  Similarity=-0.024  Sum_probs=26.9

Q ss_pred             ccccccCce--eeeeeCCCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKT--VPIVRGGEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPs--IPN~~~g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |...|+.|.  .|.+..+...+|++||||+|||++..
T Consensus       164 Gl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~  200 (228)
T cd01090         164 GVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIML  200 (228)
T ss_pred             ccccccCCCccccccCCCCCCccCCCCEEEECCEEee
Confidence            666788662  23445567789999999999999975

E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.

>cd01092 APP-like Similar to Prolidase and Aminopeptidase P

Probab=97.20  E-value=0.0004  Score=49.62  Aligned_cols=39  Identities=26%  Similarity=0.329  Sum_probs=29.9

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC-CcceEEe
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGMVHD   80 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~V~~   80 (99)
                      |+.+|+.|.|   ..+++..|++||+|+|||++.. |.+-+..
T Consensus       158 G~~~~e~p~i---~~~~~~~l~~gmv~~iep~~~~~~~~g~~~  197 (208)
T cd01092         158 GLEVHEAPYI---SPGSDDVLEEGMVFTIEPGIYIPGKGGVRI  197 (208)
T ss_pred             CcccCcCCCc---CCCCCCCcCCCCEEEECCeEEecCCCEEEe
Confidence            8889998864   4567889999999999999863 4444433

The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.

>cd01087 Prolidase Prolidase

Probab=97.14  E-value=0.00046  Score=51.43  Aligned_cols=34  Identities=12%  Similarity=-0.084  Sum_probs=26.7

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |..+|+.|.+ ....++...|++||||+|||++..
T Consensus       176 Gl~~~e~p~~-~~~~~~~~~l~~GMv~~iEp~iy~  209 (243)
T cd01087         176 GLDVHDVGGY-LRYLRRARPLEPGMVITIEPGIYF  209 (243)
T ss_pred             CcccccCccc-cccCCCCCCCCCCCEEEECCEEEe
Confidence            8888987755 114467789999999999999863

E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.

>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.03  E-value=0.00083  Score=48.35  Aligned_cols=39  Identities=26%  Similarity=0.302  Sum_probs=26.6

Q ss_pred             ccccccC-ceeeeeeCCCCeEeecCcEEEEeEeee--CCcceEE
Q psy15502         39 SRSIHAG-KTVPIVRGGEGTLMEENEFYAIETFGS--TGKGMVH   79 (99)
Q Consensus        39 gy~lHeg-PsIPN~~~g~~~~L~eGmV~AIEPF~T--tG~g~V~   79 (99)
                      |..+|+. |.|++  .++...|++||||+|||.+.  .|.+-+.
T Consensus       157 G~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~~~~~g~~  198 (207)
T PF00557_consen  157 GLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFIPGWGGVR  198 (207)
T ss_dssp             SSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEETTSEEEE
T ss_pred             cccccccceeeec--ccccceecCCCceeEeeeEEccCCCcEEE
Confidence            7788875 55433  67888999999999999765  3554333

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....

>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase

Probab=96.65  E-value=0.0025  Score=44.35  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=28.2

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTG   74 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG   74 (99)
                      |+..|+.|.   +..+.+.+|++||+++|||+....
T Consensus       157 G~~~~e~~~---~~~~~~~~l~~gmv~~iep~~~~~  189 (207)
T cd01066         157 GLEIHEPPV---LKAGDDTVLEPGMVFAVEPGLYLP  189 (207)
T ss_pred             CcccCCCCC---cCCCCCCCcCCCCEEEECCEEEEC
Confidence            999999887   445677899999999999999864

Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.

>PRK15173 peptidase; Provisional

Probab=96.40  E-value=0.0041  Score=49.40  Aligned_cols=37  Identities=14%  Similarity=0.074  Sum_probs=27.6

Q ss_pred             cc-cc--ccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcc
Q psy15502         37 HS-SR--SIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKG   76 (99)
Q Consensus        37 ~G-gy--~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g   76 (99)
                      || |+  .+|+.|.+..   +....|++||||+|||.+- .|.+
T Consensus       254 HGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~g~g  294 (323)
T PRK15173        254 HGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGYNLG  294 (323)
T ss_pred             CcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcCCCc
Confidence            45 65  7899987643   5567899999999999764 4444

>PRK14576 putative endopeptidase; Provisional

Probab=95.95  E-value=0.0087  Score=48.81  Aligned_cols=38  Identities=13%  Similarity=0.084  Sum_probs=27.9

Q ss_pred             cccccCceeeeeeCCCCeEeecCcEEEEeE-eeeCCcceEEe
Q psy15502         40 RSIHAGKTVPIVRGGEGTLMEENEFYAIET-FGSTGKGMVHD   80 (99)
Q Consensus        40 y~lHegPsIPN~~~g~~~~L~eGmV~AIEP-F~TtG~g~V~~   80 (99)
                      -.+|+.|.+   ..++...|++||||+||| +...|.+-++.
T Consensus       342 l~~~e~P~i---~~~~~~~Le~GMv~~vEp~~y~~g~ggvri  380 (405)
T PRK14576        342 LGLEEVPFV---STQATETFCPGMVLSLETPYYGIGVGSIML  380 (405)
T ss_pred             CCcCcCCCc---CCCCCCccCCCCEEEECCceeecCCCEEEE
Confidence            467887754   456678999999999997 77766554444

>PRK10879 proline aminopeptidase P II; Provisional

Probab=95.91  E-value=0.0048  Score=51.05  Aligned_cols=32  Identities=13%  Similarity=0.132  Sum_probs=24.5

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |-.+|+   +|++..++...|++||||+|||.+..
T Consensus       355 GldvHd---~~~~~~~~~~~L~~GmV~tvEPgiY~  386 (438)
T PRK10879        355 GLDVHD---VGVYGQDRSRILEPGMVLTVEPGLYI  386 (438)
T ss_pred             CcCcCc---CCCcCCCCCCcCCCCCEEEECCEEEE
Confidence            555564   56665567789999999999998863

>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor

Probab=95.77  E-value=0.0057  Score=46.94  Aligned_cols=32  Identities=3%  Similarity=0.011  Sum_probs=26.2

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      |..+|+.|.+.  ..+....|++||||+|||-+.
T Consensus       176 Gle~hE~~~~l--~~~~~~~L~~GMvf~vepGi~  207 (243)
T cd01091         176 GLEFRESSLII--NAKNDRKLKKGMVFNLSIGFS  207 (243)
T ss_pred             CcccccCcccc--CCCCCCCcCCCCEEEEeCCcc
Confidence            99999987543  345567899999999999986

>PRK14575 putative peptidase; Provisional

Probab=95.71  E-value=0.01  Score=48.36  Aligned_cols=33  Identities=12%  Similarity=0.048  Sum_probs=26.1

Q ss_pred             cc-cc--ccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502         37 HS-SR--SIHAGKTVPIVRGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        37 ~G-gy--~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      || |+  .+|+.|.+.   .++...|++||||+|||.+.
T Consensus       337 HGiG~~lg~~e~P~i~---~~~~~~Le~GMv~tiEpgiy  372 (406)
T PRK14575        337 HGNGVFLGLEESPFVS---THATESFTSGMVLSLETPYY  372 (406)
T ss_pred             CcccCCCCCccCCCCC---CCCCCCcCCCCEEEECCeee
Confidence            45 65  689988764   35677899999999999874

>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]

Probab=95.20  E-value=0.019  Score=45.87  Aligned_cols=40  Identities=23%  Similarity=0.242  Sum_probs=29.7

Q ss_pred             c--cccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502         39 S--RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD   80 (99)
Q Consensus        39 g--y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~   80 (99)
                      |  -.+||.|.  ....+....|++||||++||-.- .|.+-|+.
T Consensus       317 G~~l~vhE~p~--~~~~~~~~~L~~GMv~t~Epg~y~~g~~GirI  359 (384)
T COG0006         317 GFVLDVHEHPQ--YLSPGSDTTLEPGMVFSIEPGIYIPGGGGVRI  359 (384)
T ss_pred             CCCcccCcCcc--ccCCCCCccccCCcEEEeccccccCCCceEEE
Confidence            7  89999997  33567889999999999999633 34444333

>TIGR02993 ectoine_eutD ectoine utilization protein EutD

Probab=94.11  E-value=0.074  Score=43.08  Aligned_cols=34  Identities=15%  Similarity=0.028  Sum_probs=25.1

Q ss_pred             ccccccCc--eeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGK--TVPIVRGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegP--sIPN~~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      |..+|..+  .-|.+..++...|++||||+|||-+-
T Consensus       323 Gl~~~~~~~e~~~~l~~~~~~~L~~GMv~tvEpgiy  358 (391)
T TIGR02993       323 GLSYPPDWGERTMSLRPGDNTVLKPGMTFHFMTGLW  358 (391)
T ss_pred             ccCcCCCCCCccccccCCCCceecCCCEEEEcceeE
Confidence            55566433  13456677889999999999999775

Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.

>PRK13607 proline dipeptidase; Provisional

Probab=91.12  E-value=0.12  Score=43.22  Aligned_cols=34  Identities=12%  Similarity=-0.114  Sum_probs=24.2

Q ss_pred             ccccccCceeeee------------eC-CCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGKTVPIV------------RG-GEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegPsIPN~------------~~-g~~~~L~eGmV~AIEPF~T   72 (99)
                      |-..|+.+.++..            .. .....|++||||+|||=+-
T Consensus       342 GldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY  388 (443)
T PRK13607        342 GLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLY  388 (443)
T ss_pred             CcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeee
Confidence            8889987554321            11 2457899999999999764

>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4

Probab=90.72  E-value=0.19  Score=37.54  Aligned_cols=44  Identities=14%  Similarity=0.049  Sum_probs=29.1

Q ss_pred             CCccceeeccc---ccc--cccCceeeeeeCCCCeEeecCcEEEEeEeeeC-Ccce
Q psy15502         28 GPKPPIFIKHS---SRS--IHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGM   77 (99)
Q Consensus        28 ~~~~vVrnl~G---gy~--lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~   77 (99)
                      .++++++++.+   +|-  .|+++.      .-...|++||+|++||.... |.+-
T Consensus       160 ~G~~~~~~~~~h~~g~~~~~~~~~~------~~~~~l~~gmvf~~ep~~~~~g~~~  209 (228)
T cd01089         160 YGCTPVEGVLSHQLKRVVSSGEGKA------KLVECVKHGLLFPYPVLYEKEGEVV  209 (228)
T ss_pred             cCCEEecCccccCcCceEecCCCCc------cchhhccCCcccccceeEccCCCeE
Confidence            46788888875   443  333321      12567999999999999973 4443

Family members have been implicated in cell cycle control.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
1b59_A	370	Complex Of Human Methionine Aminopeptidase-2 Comple		2e-23
1r58_A	369	Crystal Structure Of Metap2 Complexed With A357300		3e-23
1b6a_A	478	Human Methionine Aminopeptidase 2 Complexed With Tn		4e-23
1qzy_A	478	Human Methionine Aminopeptidase In Complex With Ben		5e-23
3fm3_A	358	Crystal Structure Of An Encephalitozoon Cuniculi Me		7e-06

>pdb|1B59|A Chain A, Complex Of Human Methionine Aminopeptidase-2 Complexed With Ovalicin Length = 370

Iteration: 1
 Score =  103 bits (257), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 230 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 287

>pdb|1R58|A Chain A, Crystal Structure Of Metap2 Complexed With A357300 Length = 369

Iteration: 1
 Score =  103 bits (256), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/58 (74%), Positives = 51/58 (87%)
Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPI++GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 229 IHAGKTVPIIKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 286

>pdb|1B6A|A Chain A, Human Methionine Aminopeptidase 2 Complexed With Tnp-470 Length = 478

Iteration: 1
 Score =  103 bits (256), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

>pdb|1QZY|A Chain A, Human Methionine Aminopeptidase In Complex With Bengamide Inhibitor Laf153 And Cobalt Length = 478

Iteration: 1
 Score =  102 bits (254), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/58 (74%), Positives = 51/58 (87%)
Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPI++GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIIKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

>pdb|3FM3|A Chain A, Crystal Structure Of An Encephalitozoon Cuniculi Methionine Aminopeptidase Type 2 Length = 358

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKN 90
           IH G ++P V   + T ++ + FYA+ETF +TGKG + D    SH++ N
Sbjct: 217 IHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVLN 265

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
1b6a_A	478	Methionine aminopeptidase; angiogenesis inhibitor;	3e-21
2nw5_A	360	Methionine aminopeptidase 2; metap2, structural ge	5e-19
1xgs_A	295	Methionine aminopeptidase; hyperthermophIle; 1.75A	5e-18
2q8k_A	401	Proliferation-associated protein 2G4; EBP1, PA2G4,	6e-17

>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478

 Score = 85.4 bits (211), Expect = 3e-21
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 42  IHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           IHAGKTVPIV+GGE T MEE E YAIETFGSTGKG+VHDDM+ SHYMKNF+  ++P+R
Sbjct: 338 IHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIR 395

>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295

 Score = 75.4 bits (186), Expect = 5e-18
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 42  IHAGKTVP-IVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYIPLR 99
           +HAG ++P I R  +  +++E + +AIE F + G G V +      YM   +    P+R
Sbjct: 160 LHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDV---PVR 215

>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401

 Score = 73.3 bits (180), Expect = 6e-17
 Identities = 13/63 (20%), Positives = 24/63 (38%)

Query: 37  HSSRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNFEASYI 96
              ++I    T    +  E    E +E YA++   S+G+G   D    +   K   +   
Sbjct: 203 DGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQY 262

Query: 97  PLR 99
            L+
Sbjct: 263 GLK 265

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
2nw5_A	360	Methionine aminopeptidase 2; metap2, structural ge	99.65
3fm3_A	358	Methionine aminopeptidase 2; metap2, structural ge	99.61
1b6a_A	478	Methionine aminopeptidase; angiogenesis inhibitor;	99.5
1xgs_A	295	Methionine aminopeptidase; hyperthermophIle; 1.75A	99.45
2q8k_A	401	Proliferation-associated protein 2G4; EBP1, PA2G4,	99.19
4fuk_A	337	Methionine aminopeptidase; structural genomics con	98.65
3tb5_A	264	Methionine aminopeptidase; hydrolase, metalloprote	98.59
3mx6_A	262	Methionine aminopeptidase; seattle structural geno	98.59
1qxy_A	252	Methionyl aminopeptidase; PITA bread fold, hydrola	98.57
4b6a_t	614	Probable metalloprotease ARX1; large ribosomal sub	98.51
1o0x_A	262	Methionine aminopeptidase; TM1478, structural geno	98.5
3tav_A	286	Methionine aminopeptidase; ssgcid, seattle structu	98.48
2b3h_A	329	Methionine aminopeptidase 1; hydrolase, metallopro	98.47
2gg2_A	263	Methionine aminopeptidase; PITA-bread fold, MAP in	98.45
3s6b_A	368	Methionine aminopeptidase; malaria, proteolysis, "	98.41
3pka_A	285	Methionine aminopeptidase; hydrolase-hydrolase inh	98.39
2zsg_A	359	Aminopeptidase P, putative; hydrolase; 1.65A {Ther	97.65
4b28_A	470	Metallopeptidase, family M24, putative; lyase, ime	97.64
1wy2_A	351	XAA-Pro dipeptidase; structural genomics, prolidas	97.64
4fkc_A	377	XAA-Pro aminopeptidase; PITA-bread structure, prol	97.62
1wn1_A	356	Dipeptidase; prolidase, cobalt(II), structural gen	97.58
3q6d_A	356	Proline dipeptidase; structural genomics, csgid, c	97.58
4ege_A	378	Dipeptidase PEPE; structural genomics, seattle str	97.45
3biq_A	467	FACT complex subunit SPT16; PITA-bread, aminopepti	97.42
3cb6_A	444	FACT complex subunit SPT16; peptidase homology dom	97.36
1kp0_A	402	Creatine amidinohydrolase; alpha betal, 3-layer(AB	97.18
3rva_A	451	Organophosphorus acid anhydrolase; PITA-bread fold	97.18
3ctz_A	623	XAA-Pro aminopeptidase 1; PITA-bread fold, alterna	96.98
3l24_A	517	XAA-Pro dipeptidase; PITA-bread, detoxification, h	96.95
1chm_A	401	Creatine amidinohydrolase; creatinase; 1.90A {Pseu	96.67
2iw2_A	494	XAA-Pro dipeptidase; metallocarboxypeptidase, dise	96.6
2v3z_A	440	XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli	96.55
3ig4_A	427	XAA-Pro aminopeptidase; csgid, hydrolase, struct g	95.4

>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*

Probab=99.61  E-value=4.2e-16  Score=123.46  Aligned_cols=79  Identities=33%  Similarity=0.539  Sum_probs=69.2

Q ss_pred             eeEEEEecceeeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeec
Q psy15502         15 ERFSIQIAPTKLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKN   90 (99)
Q Consensus        15 ~~~~~~~~~~~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~   90 (99)
                      +++..+++.+..  +++++++|.|    ++.+|++|+|||+.++.+.+|++|||||||||+|+|+|+|.+...+++|+++
T Consensus       188 ~~~~~~v~~~~~--~~~~v~~~~GHgiG~~~~he~~~ip~~~~~~~~~le~GmV~tIEP~is~G~g~v~~~~~~~~~~~~  265 (358)
T 3fm3_A          188 SSYEVEIGGRMW--PIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVLN  265 (358)
T ss_dssp             TTCEEECSSSEE--ECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCSSEEEEEEEEEESSCSCCEECSCCCCEEEC
T ss_pred             hhccceeccccc--cccccccccccccCCccccCCCccCccCCCCCcEEeeeeeEEeeeeeecCCceEEECCCceEEEec
Confidence            456667777666  7889999988    4689999999999888888999999999999999999999999999999987


Q ss_pred             cCCCC
Q psy15502         91 FEASY   95 (99)
Q Consensus        91 ~~~~~   95 (99)
                      ..+.+
T Consensus       266 ~~~~~  270 (358)
T 3fm3_A          266 TYKSR  270 (358)
T ss_dssp             SSCCC
T ss_pred             cccch
Confidence            76543

>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*

Probab=99.50  E-value=1.5e-14  Score=119.97  Aligned_cols=82  Identities=57%  Similarity=0.926  Sum_probs=68.9

Q ss_pred             eEEEEecceeeeCCccceeeccc----ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEeCCceeeeeecc
Q psy15502         16 RFSIQIAPTKLSGPKPPIFIKHS----SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF   91 (99)
Q Consensus        16 ~~~~~~~~~~~s~~~~vVrnl~G----gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~   91 (99)
                      ++-+.++|+..  +++++++++|    |+.+|++|++||+..+.+.+|++|||||||||++.|.|.+.+..+|+||+++.
T Consensus       310 ~~G~~l~g~~~--~~~~v~h~~GHGIGGl~iHE~P~vP~~~~~~~~~Le~GMVftIEP~i~~G~G~~~ed~~~~iy~~~~  387 (478)
T 1b6a_A          310 SYEVEIDGKTY--QVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNF  387 (478)
T ss_dssp             TCEEEETTEEE--ECEECTTCEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSCSCCEECSCCCEEEECT
T ss_pred             HcCCCcccccc--cceeecCcceeCCCCccccCCCccceecCCCCCEeCCCCEEEEeCeeECCCCEEEECCceeEEeecc
Confidence            44555666554  5678899987    58999999999998888899999999999999999999999999999999987


Q ss_pred             CCCCCCCC
Q psy15502         92 EASYIPLR   99 (99)
Q Consensus        92 ~~~~~~~~   99 (99)
                      +....+||
T Consensus       388 d~~~~~lk  395 (478)
T 1b6a_A          388 DVGHVPIR  395 (478)
T ss_dssp             TCCCCCCC
T ss_pred             cccccccc
Confidence            65555554

>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A

Probab=99.45  E-value=4.5e-14  Score=108.77  Aligned_cols=64  Identities=25%  Similarity=0.355  Sum_probs=56.4

Q ss_pred             CCccceeeccc---c-cccccCceeeeeeCCC-CeEeecCcEEEEeEeeeCCcceEEeCCceeeeeecc
Q psy15502         28 GPKPPIFIKHS---S-RSIHAGKTVPIVRGGE-GTLMEENEFYAIETFGSTGKGMVHDDMDVSHYMKNF   91 (99)
Q Consensus        28 ~~~~vVrnl~G---g-y~lHegPsIPN~~~g~-~~~L~eGmV~AIEPF~TtG~g~V~~~~~~~iy~~~~   91 (99)
                      .++.++++++|   | +.+|++|+|||+...+ +.+|++|||||||||++.|.+.|+++..++||+++.
T Consensus       142 ~G~~~~~~~~GHgIG~l~~He~p~ip~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~iy~~~~  210 (295)
T 1xgs_A          142 RGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVR  210 (295)
T ss_dssp             TTCEECTTCCEEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEEEEEEEEEEECC
T ss_pred             CCCeEECCCcCCCCCCcccCCCCcCCccCCCCCCCEeCCCCEEEEcceeECCCCEEEECCceEEEEecC
Confidence            45567788887   5 7999999999997655 889999999999999999999999999999999864

>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A

Probab=99.19  E-value=1.2e-11  Score=99.42  Aligned_cols=67  Identities=22%  Similarity=0.250  Sum_probs=56.0

Q ss_pred             eCCccceeeccc---ccccccCce--eeeeeC-----CCCeEeecCcEEEEeEeeeCCcceEEeCC-ceeeeeeccCC
Q psy15502         27 SGPKPPIFIKHS---SRSIHAGKT--VPIVRG-----GEGTLMEENEFYAIETFGSTGKGMVHDDM-DVSHYMKNFEA   93 (99)
Q Consensus        27 s~~~~vVrnl~G---gy~lHegPs--IPN~~~-----g~~~~L~eGmV~AIEPF~TtG~g~V~~~~-~~~iy~~~~~~   93 (99)
                      +++++++++|+|   |..+|++|.  ++|+..     +.+.+|++|||||||||+++|.|.+++.. .++||+++.+.
T Consensus       183 ~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~y~~~~~~  260 (401)
T 2q8k_A          183 SFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSK  260 (401)
T ss_dssp             TTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCEEEECTTC
T ss_pred             HcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceEEeecccc
Confidence            457888999998   999999995  456532     46789999999999999999999998877 88999997554

>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}

Probab=98.65  E-value=7.8e-09  Score=80.48  Aligned_cols=52  Identities=13%  Similarity=0.021  Sum_probs=41.9

Q ss_pred             CCccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502         28 GPKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVH   79 (99)
Q Consensus        28 ~~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~   79 (99)
                      ....++++++|   |..+|++|.++++.+ +.+.+|++||||||||+++.|...+.
T Consensus       216 ~g~~~~~~~~GHGIG~~~he~p~~~~~~~~~~~~~L~~GMV~TIEPgiy~~~~~~~  271 (337)
T 4fuk_A          216 YQCSVVRTYTGHGVGHLFHTSPTVCHYANNKSLGMMRPGHVFTIEPMINLGTWQDV  271 (337)
T ss_dssp             TTCEECSSEEEEECSSSSSEEEEECCSCC---CCBCCTTCEEEECCEEESSCSCEE
T ss_pred             hcCCcccCcccCCCCCccccCCcccccccCCCCCEeCCCCEEEECCeeEcCCCcce
Confidence            45567788877   999999999999954 77889999999999999998765433

>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}

Probab=98.59  E-value=2e-08  Score=74.59  Aligned_cols=52  Identities=19%  Similarity=0.171  Sum_probs=43.8

Q ss_pred             Cccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      .+.+++++.|   |..+|+.|.|+++.. +++.+|++||||||||++..|.+.+..
T Consensus       158 g~~~~~~~~GHgiG~~~~e~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~  213 (264)
T 3tb5_A          158 GYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKM  213 (264)
T ss_dssp             TCEECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEE
T ss_pred             CCceeeeceecCCCCCCccCCccCccccCCCCCCccCCcEEEEeeeEEcCCCceEE
Confidence            4556778877   999999999999954 788999999999999999988766544

>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A

Probab=98.59  E-value=1.7e-08  Score=75.30  Aligned_cols=51  Identities=16%  Similarity=0.174  Sum_probs=42.5

Q ss_pred             ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      +..++.++|   |..+|+.|.|||+. .+.+.+|++||||+|||++..|.+.|+.
T Consensus       163 ~~~~~~~~GHgiG~~~hE~p~i~~~~~~~~~~~L~~Gmv~tiEPgiy~g~~gvri  217 (262)
T 3mx6_A          163 YSVVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTIL  217 (262)
T ss_dssp             CEECCSCCEEECSSSSSEEEEECSSCCTTCSCBCCTTCEEEECCEEESSCSCEEE
T ss_pred             CccCCCccccccCCcccCCCcccccCCCCCCCEeCCCCEEEEeCEEEcCCCeEEE
Confidence            334566676   99999999999994 5788899999999999999998877654

>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*

Probab=98.57  E-value=1.9e-08  Score=73.95  Aligned_cols=50  Identities=26%  Similarity=0.206  Sum_probs=41.9

Q ss_pred             cceeeccc---ccccccCc-eeeeee-CCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         31 PPIFIKHS---SRSIHAGK-TVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        31 ~vVrnl~G---gy~lHegP-sIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      ..+++++|   |..+|+.| .|||+. .+.+..|++||||+|||++..|.+.++.
T Consensus       160 ~~~~~~~GHgiG~~~he~p~~i~~~~~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~  214 (252)
T 1qxy_A          160 KVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTE  214 (252)
T ss_dssp             EECTTCCEEECSSSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEE
T ss_pred             EecCCccccccCcccccCCccccCCCCCCCCCCccCCCEEEEecEEEcCCCceEe
Confidence            34556666   99999999 999995 4678899999999999999998877654

>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}

Probab=98.51  E-value=6.6e-08  Score=82.96  Aligned_cols=71  Identities=11%  Similarity=0.066  Sum_probs=53.0

Q ss_pred             eeCCccceeeccc----ccccccCceeeeeeC------------------------------------------CCCeEe
Q psy15502         26 LSGPKPPIFIKHS----SRSIHAGKTVPIVRG------------------------------------------GEGTLM   59 (99)
Q Consensus        26 ~s~~~~vVrnl~G----gy~lHegPsIPN~~~------------------------------------------g~~~~L   59 (99)
                      -+|++++|+++.|    +|.+|.++.||+...                                          .+...+
T Consensus       253 ksY~ck~Vegl~sH~i~r~~i~g~k~Ii~~~~~kgv~~~e~hqe~~~~~~~~~k~~~~v~~~~~~~~~~~~~~~~Dd~~~  332 (614)
T 4b6a_t          253 RSYNCGVVPGSRVRRIRRFLAGQNEGIVAEREYKGVVWTESHQEADLLSNTDAKDLTVVDRGQSTPFTNVSAIPSDDFVV  332 (614)
T ss_dssp             HTTTCEECTTCEEEEEBTTBSSCSCEEESS------------------------------------CCHHHHTTSCCCBC
T ss_pred             hcCCcEEecccccccccceecCCCceeccccccccccccccchhhhhhccccccccccccccccccccccccccCCceee
Confidence            3689999999998    999999999998532                                          134579


Q ss_pred             ecCcEEEEeEeeeCCcceEEeC---------------------CceeeeeeccCCCCC
Q psy15502         60 EENEFYAIETFGSTGKGMVHDD---------------------MDVSHYMKNFEASYI   96 (99)
Q Consensus        60 ~eGmV~AIEPF~TtG~g~V~~~---------------------~~~~iy~~~~~~~~~   96 (99)
                      ++|+|||||+|+++|.|.+.++                     ..++||+.+....+.
T Consensus       333 EeGEVYaIDi~~STG~G~~~~g~~tl~~id~~tGk~~k~~e~~~RtTiY~R~~~~~Y~  390 (614)
T 4b6a_t          333 QSGEVYLIDLKMASLEHCTKKGLVTLETVDSYTGKSHKAGELIARPGAYVRDFAQTHI  390 (614)
T ss_dssp             CTTCEEEEEEEEESSCC--------------------CCEECSCCCCEEEECTTCCCC
T ss_pred             cCCcEEEEEEEeecCCCcccccccccccccccccccccccccccccceEEecCCccee
Confidence            9999999999999999876554                     245789887666543

>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1

Probab=98.50  E-value=5.4e-08  Score=72.65  Aligned_cols=51  Identities=24%  Similarity=0.208  Sum_probs=42.2

Q ss_pred             ccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      +..++.++|   |..+|++|.|+|+.. +.+.+|++||||+|||++..|.+.++.
T Consensus       172 ~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~  226 (262)
T 1o0x_A          172 FNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVV  226 (262)
T ss_dssp             CEECCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEEE
T ss_pred             CcccCCcccCcccccccCCCccCCCCCCCCCCccCCCCEEEECCEEEcCCCceee
Confidence            334456666   999999999999854 678899999999999999998877663

>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}

Probab=98.48  E-value=5.4e-08  Score=73.81  Aligned_cols=50  Identities=22%  Similarity=0.204  Sum_probs=40.9

Q ss_pred             ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVH   79 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~   79 (99)
                      +.+++.+.|   |..+||+|.|+|+. .+++.+|++||||+|||++..|...+.
T Consensus       196 ~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~GmV~tiEPgiy~~~~~~~  249 (286)
T 3tav_A          196 FGIVDGYGGHGIGRSMHLDPFLPNEGAPGKGPLLAVGSVLAIEPMLTLGTTQTR  249 (286)
T ss_dssp             CEECTTCCEEECSSSSSEEEEECSSCCSSCSSBCCTTBEEEECCEEESSCSCEE
T ss_pred             CcccCCcccCcccccccCCccccCcCCCCCCCCcCCCCEEEEcCEEEcCCCceE
Confidence            334567777   99999999999985 477889999999999999998765443

>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*

Probab=98.47  E-value=6.1e-08  Score=76.02  Aligned_cols=49  Identities=14%  Similarity=0.118  Sum_probs=40.2

Q ss_pred             Cccceeeccc---ccccccCceeeeeeC-CCCeEeecCcEEEEeEeeeCCcce
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIVRG-GEGTLMEENEFYAIETFGSTGKGM   77 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~~~-g~~~~L~eGmV~AIEPF~TtG~g~   77 (99)
                      ++.++++++|   |..+|++|.||++.. ..+..|++||||+|||+++.|...
T Consensus       229 G~~~~~~~~GHGIG~~~HE~P~i~~~~~~~~~~~L~~GMVftIEPgiy~~~~~  281 (329)
T 2b3h_A          229 GFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQ  281 (329)
T ss_dssp             TCEECCSCCEEECSSSSSEEEEECCSSSCCCCCBCCTTCEEEECCEEESSCCC
T ss_pred             CCCccCCcccCCcCcccccCCcccccccCCCCCEECCCCEEEEeCCcCcCccc
Confidence            4455677877   899999999999854 446799999999999999976543

>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...

Probab=98.45  E-value=7.7e-08  Score=71.38  Aligned_cols=51  Identities=14%  Similarity=0.134  Sum_probs=41.1

Q ss_pred             Cccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKGMVH   79 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g~V~   79 (99)
                      ++..++++.|   |..+|++|.++|+. .+.+.+|++||||+|||++..|.+.++
T Consensus       160 G~~~~~~~~GHgiG~~~he~p~i~~~~~~~~~~~l~~Gmv~tiEPgi~~~~~~~~  214 (263)
T 2gg2_A          160 GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIR  214 (263)
T ss_dssp             TCEECSSCCEEECSSSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEE
T ss_pred             CCEECCCcccccCCcceecCCcccCccCCCCCCCcCCCCEEEEecEEEcCCCceE
Confidence            3344566676   99999999999984 467789999999999999998766544

>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}

Probab=98.41  E-value=1.1e-07  Score=76.46  Aligned_cols=47  Identities=17%  Similarity=0.256  Sum_probs=39.3

Q ss_pred             Cccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCc
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGK   75 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~   75 (99)
                      ++.+++.++|   |..+|+.|.|+++. ++....|++||||+|||+++.|.
T Consensus       260 G~~~~~~~~GHGIG~~vHE~P~i~~~~~~~~~~~L~~GMVfTIEPgiy~~~  310 (368)
T 3s6b_A          260 NFSVVRSYSGHGVGKLFHSNPTVPHFKKNKAVGIMKPGHVFTIEPMINQGH  310 (368)
T ss_dssp             TCEECCSCCEEECSSSSSEEEEECSSSSCCCCCBCCTTCEEEECCEEESSC
T ss_pred             CCCcccceeeCCCCccccCCCccccccCCCCCCEECCCCEEEEcCeEEcCc
Confidence            4455677777   99999999999985 46677999999999999999764

>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A

Probab=98.39  E-value=2e-07  Score=70.79  Aligned_cols=47  Identities=17%  Similarity=0.099  Sum_probs=38.6

Q ss_pred             ccceeeccc---ccccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCcc
Q psy15502         30 KPPIFIKHS---SRSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGKG   76 (99)
Q Consensus        30 ~~vVrnl~G---gy~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~g   76 (99)
                      +..++.++|   |..+||+|.|+|+. .+++..|++||||+|||++..+..
T Consensus       196 ~~~~~~~~GHgiG~~~hE~P~i~~~~~~~~~~~L~~Gmv~tiEPgiy~~~~  246 (285)
T 3pka_A          196 YNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGAL  246 (285)
T ss_dssp             CEECCSSCEEBCSSSSSCSCEECSSCCTTCCCBCCTTBEEEECCEEESSCS
T ss_pred             CccCCCcccccCCCcccCCCcccCccCCCCCCccCCCCEEEEcCEEEcCCC
Confidence            344456666   99999999999985 467889999999999999998643

>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}

Probab=97.65  E-value=2.2e-05  Score=59.76  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=30.0

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEE
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVH   79 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~   79 (99)
                      |..+|++|.|+   .+++..|++||||+|||.+. .|.+-++
T Consensus       296 Gl~~he~p~i~---~~~~~~l~~gmv~tiEPgiy~~~~~gvr  334 (359)
T 2zsg_A          296 GLEVHEGPAIS---FRNDSPLPENVVFTVEPGIYLEGKFGIR  334 (359)
T ss_dssp             SSSSSEEEEES---TTCCCBCCTTBEEEECCEEEETTTEEEE
T ss_pred             CcccCCCCCcC---CCCCCCcCCCCEEEECCEEEECCCcEEE
Confidence            89999988664   45678999999999999997 3544443

>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}

Probab=97.64  E-value=2.1e-05  Score=64.18  Aligned_cols=43  Identities=14%  Similarity=0.020  Sum_probs=33.2

Q ss_pred             ccccccCceeeeee----CCCCeEeecCcEEEEeEeeeC--CcceEEeCC
Q psy15502         39 SRSIHAGKTVPIVR----GGEGTLMEENEFYAIETFGST--GKGMVHDDM   82 (99)
Q Consensus        39 gy~lHegPsIPN~~----~g~~~~L~eGmV~AIEPF~Tt--G~g~V~~~~   82 (99)
                      |. .||.|.|+++.    .+.+..|++||||+|||++..  |.+-|+...
T Consensus       397 Gl-~HE~P~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~~~g~~GvriEd  445 (470)
T 4b28_A          397 GL-CDEWPLVAYPDHAVAGAYDYPLEPGMTLCVEALISEEGGDFSIKLED  445 (470)
T ss_dssp             SS-SEEEEEECCTTTCCTTSSCCBCCTTCEEEEEEEEECTTCSCEEEEEE
T ss_pred             Cc-CCCCCcccCccccccCCCCCEECCCCEEEEcCeeecCCCcEEEEEee
Confidence            88 59999998853    356789999999999999984  655554433

>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A

Probab=97.64  E-value=2e-05  Score=60.96  Aligned_cols=40  Identities=20%  Similarity=0.091  Sum_probs=31.7

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC-CcceEEeC
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGMVHDD   81 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~V~~~   81 (99)
                      |..+||+|.|   ..+++..|++||||+|||.+.. |.+.|+..
T Consensus       290 Gl~~hE~p~i---~~~~~~~l~~Gmv~tiEPgiy~~g~~gvriE  330 (351)
T 1wy2_A          290 GLEVHEWPRV---SQYDETVLREGMVITIEPGIYIPKIGGVRIE  330 (351)
T ss_dssp             SSSSSEEEEE---STTCCCBCCTTCEEEECCEEEETTTEEEECB
T ss_pred             CCCcCCCCcc---CCCCCCCcCCCCEEEECCEEEeCCCCeEEEe
Confidence            8999998765   3467789999999999999985 65555543

>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}

Probab=97.62  E-value=2.6e-05  Score=60.22  Aligned_cols=39  Identities=18%  Similarity=0.200  Sum_probs=30.9

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD   80 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~   80 (99)
                      |..+||.|.+   ..+++..|++||||+|||.+. .|.+-|+.
T Consensus       314 Gl~~hE~P~i---~~~~~~~L~~Gmv~tiEPgiy~~g~~Gvri  353 (377)
T 4fkc_A          314 GIDVHEEPYI---SPGNKKILKDGMVFTIEPGIYLQGKFGVRI  353 (377)
T ss_dssp             SSSSSEEEEE---CSSCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred             CCccccCCcc---cCCCCCEeCCCCEEEECCeeEECCccEEEE
Confidence            8999998865   456778999999999999987 45555543

>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A

Probab=97.58  E-value=2.7e-05  Score=60.27  Aligned_cols=39  Identities=15%  Similarity=0.142  Sum_probs=31.0

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeC-CcceEEe
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGST-GKGMVHD   80 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~Tt-G~g~V~~   80 (99)
                      |..+||.|.++   .+++..|++||||+|||.+.. |.+-|+.
T Consensus       293 Gl~~he~p~i~---~~~~~~l~~Gmv~tiEPgiy~~g~~gvri  332 (356)
T 1wn1_A          293 GLDVHEEPYIG---PDGEVILKNGMTFTIEPGIYVPGLGGVRI  332 (356)
T ss_dssp             SSSSSEEEEES---TTCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred             CCccCCCcccC---CCCCCCcCCCCEEEECCeeEeCCCcEEEE
Confidence            89999998754   467789999999999999975 5554443

>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}

Probab=97.58  E-value=3.2e-05  Score=59.22  Aligned_cols=39  Identities=21%  Similarity=0.107  Sum_probs=30.2

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEe
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHD   80 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~   80 (99)
                      |..+||+|.|+   .+++..|++||||+|||.+. .|.+-|+.
T Consensus       293 Gl~~he~p~i~---~~~~~~l~~Gmv~tiEPgiy~~g~~gvri  332 (356)
T 3q6d_A          293 GLEIHEAPGLA---FRSDTVLEPGMAVTVEPGIYIPGIGGVRI  332 (356)
T ss_dssp             SSSSSEEEEES---TTCCCBCCTTCEEEECCEEEETTTEEEEC
T ss_pred             CCCcCcCCCCC---CCCCCCcCCCCEEEECCEEEECCCCeEEE
Confidence            89999988654   46778999999999999987 35444433

>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}

Probab=97.45  E-value=6.2e-05  Score=59.07  Aligned_cols=38  Identities=13%  Similarity=0.098  Sum_probs=30.5

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEE
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVH   79 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~   79 (99)
                      |..+||.|.+.   .+++..|++||||+|||.+. .|.+-|+
T Consensus       313 Gl~~hE~P~i~---~~~~~~L~~Gmv~tiEPgiy~~g~~gvr  351 (378)
T 4ege_A          313 GLCVHEEPYIV---AGNELPLVAGMAFSIEPGIYFPGRWGAR  351 (378)
T ss_dssp             SSSSSEEEEEC---TTCCCBCCTTBEEEECCEEEETTTEEEE
T ss_pred             CCCcCCCCccC---CCCCCccCCCCEEEECCEEEeCCccEEE
Confidence            89999998764   46778999999999999987 4554444

>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*

Probab=97.42  E-value=8.6e-05  Score=58.93  Aligned_cols=32  Identities=3%  Similarity=-0.090  Sum_probs=27.1

Q ss_pred             ccccccCceeeeeeCCC-CeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGKTVPIVRGGE-GTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~-~~~L~eGmV~AIEPF~T   72 (99)
                      |..+|+.|.+.+  .+. +..|++||||+|||.+.
T Consensus       371 Gl~~hE~p~~~~--~~~~~~~l~~Gmv~tiEPgiy  403 (467)
T 3biq_A          371 GLEFRDSNFILN--VKNDYRKIQRGDCFNISFGFN  403 (467)
T ss_dssp             SSSSCCGGGBSS--TTCCSCCCCTTCEEEEEEEEE
T ss_pred             ccccccCCccCC--CCCCCCccCCCCEEEEeCeEE
Confidence            899999997654  344 67999999999999997

>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A

Probab=97.36  E-value=9.7e-05  Score=58.02  Aligned_cols=32  Identities=0%  Similarity=-0.076  Sum_probs=26.6

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      |..+|+.|.+.  ..+.+..|++||||+|||.+.
T Consensus       363 Gl~~he~p~~~--~~~~~~~l~~Gmv~tiEPgiy  394 (444)
T 3cb6_A          363 GIEFRESSLLV--NAKNPRVLQAGMTLNLSIGFG  394 (444)
T ss_dssp             SSSSCBGGGCC--STTCCCBCCTTCEEEEEEEEE
T ss_pred             CccccCCcccc--CCCCCcccCCCCEEEEEeccc
Confidence            89999987433  345678999999999999996

>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1

Probab=97.18  E-value=0.00016  Score=55.95  Aligned_cols=36  Identities=14%  Similarity=-0.024  Sum_probs=28.4

Q ss_pred             ccccccCcee--eeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502         39 SRSIHAGKTV--PIVRGGEGTLMEENEFYAIETFGSTG   74 (99)
Q Consensus        39 gy~lHegPsI--PN~~~g~~~~L~eGmV~AIEPF~TtG   74 (99)
                      |..+|+.|..  +++..+.+..|++||||+|||++..+
T Consensus       326 G~~~He~~~~~g~~~~~~~~~~l~~Gmv~tiEPgiy~~  363 (402)
T 1kp0_A          326 GVLBHYYGREAGVELREDIZTVLEPGMVVSMEPMVMBP  363 (402)
T ss_dssp             EEEETTEECCTTCBCCTTCCCBCCTTCEEEECCEEEEC
T ss_pred             CCccccCCcccCcccCCCCCCccCCCcEEEECCceeec
Confidence            7888987753  23445677899999999999999864

>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}

Probab=97.18  E-value=0.00017  Score=58.60  Aligned_cols=35  Identities=11%  Similarity=-0.005  Sum_probs=29.2

Q ss_pred             ccccccCceeeeeeC-------------CCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKTVPIVRG-------------GEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPsIPN~~~-------------g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |..+|+.|.+++...             +....|++||||+|||.+.-
T Consensus       342 GldvHe~p~~~~~~~g~~~~~~~~~~~l~~~~~L~~GMV~TIEPGiY~  389 (451)
T 3rva_A          342 GLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYF  389 (451)
T ss_dssp             SSSSSCTTTTBSSTTCCBCCCCTTCTTCCCCCBCCTTCEEEECCEEEC
T ss_pred             cCCcccCccccccccccccccccccccCCCCCCcCCCCEEEECCEEeE
Confidence            999999998877421             34679999999999999976

>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}

Probab=96.98  E-value=0.0004  Score=58.22  Aligned_cols=44  Identities=11%  Similarity=-0.064  Sum_probs=31.5

Q ss_pred             c--cccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcceEEeCC
Q psy15502         39 S--RSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGMVHDDM   82 (99)
Q Consensus        39 g--y~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~V~~~~   82 (99)
                      |  ..+||+|.+.+...+....|++||||+|||.+. .|.+-|+...
T Consensus       492 G~~l~vHE~P~~i~~~~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd  538 (623)
T 3ctz_A          492 GSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIEN  538 (623)
T ss_dssp             CSSSCSSCCSCEECTTCSCSCBCCTTCEEEECCEEEETTTEEEECBE
T ss_pred             CCCCCCCCCCccCCCCCCCCCccCCCeEEEEeCcEEECCceEEEEee
Confidence            7  899999974333234567899999999999887 4544444433

>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*

Probab=96.95  E-value=0.00039  Score=57.90  Aligned_cols=35  Identities=14%  Similarity=-0.006  Sum_probs=28.4

Q ss_pred             ccccccCceeeeeeC-------------CCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKTVPIVRG-------------GEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPsIPN~~~-------------g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |..+|+.|.+++...             +....|++||||+|||.+.-
T Consensus       339 GLdvHE~p~~~~~~~g~~~~~~~~~p~l~~~~~Le~GMV~TIEPGiY~  386 (517)
T 3l24_A          339 GLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGLYF  386 (517)
T ss_dssp             SSSSSCCCCTTC---------------CCTTCBCCTTEEEEECCEEEC
T ss_pred             CcccccCccccccccccccccccccccCCCCccccCCcEEEECCEEee
Confidence            999999998877421             45679999999999999976

>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1

Probab=96.67  E-value=0.00079  Score=52.61  Aligned_cols=35  Identities=14%  Similarity=0.013  Sum_probs=26.6

Q ss_pred             ccccccCcee-e-eeeCCCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKTV-P-IVRGGEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPsI-P-N~~~g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |..+|+.|.. + ++..+.+..|++||||+|||++..
T Consensus       326 G~~~h~~~~~~g~~~~~~~~~~L~~Gmv~tiEPgiy~  362 (401)
T 1chm_A          326 GTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIML  362 (401)
T ss_dssp             SBEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEEE
T ss_pred             CccCCccccccCccccCCCCCccCCCCEEEEcCeeee
Confidence            7788886532 1 234466789999999999999985

>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A

Probab=96.60  E-value=0.00097  Score=54.16  Aligned_cols=35  Identities=11%  Similarity=0.057  Sum_probs=27.3

Q ss_pred             cccccc---------CceeeeeeC-CCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHA---------GKTVPIVRG-GEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHe---------gPsIPN~~~-g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |..+|+         .|.+|++.. +....|++||||+|||-+..
T Consensus       374 Gl~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV~tiEPGiy~  418 (494)
T 2iw2_A          374 GIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYF  418 (494)
T ss_dssp             SSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCEEEC
T ss_pred             CcccccCCCcccccccccccccccCCCCCEeCCCCEEEECCcccc
Confidence            888997         345667643 56789999999999997753

>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...

Probab=96.55  E-value=0.00086  Score=53.43  Aligned_cols=33  Identities=6%  Similarity=0.004  Sum_probs=25.7

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeeeCC
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTG   74 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG   74 (99)
                      |..+|+.|.+   ..+....|++||||+|||.+...
T Consensus       357 Gl~~he~p~~---~~~~~~~L~~Gmv~tiEPgiy~~  389 (440)
T 2v3z_A          357 GLDVHDVGVY---GQDRSRILEPGMVLTVAPGLYIA  389 (440)
T ss_dssp             SSSSSCCSCC---CGGGCCCCCTTCEEEECCEEEEC
T ss_pred             CcccccCCCc---CCCCCCccCCCCEEEECCEEEeC
Confidence            7788986644   33356799999999999999854

>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}

Probab=95.40  E-value=0.007  Score=48.70  Aligned_cols=28  Identities=21%  Similarity=0.067  Sum_probs=22.0

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      |..+|+-|.      +.+..|++||||+|||.+.
T Consensus       346 Gl~vhe~~~------~~~~~L~~GMV~tiEPgiy  373 (427)
T 3ig4_A          346 GLDTHDVGT------YKDRVLEEGMVITIEPGLY  373 (427)
T ss_dssp             SSSSSCCCC------CTTCBCCTTCEEEECCEEE
T ss_pred             CcCCCcCCC------CCCCEeCCCCEEEECCEEE
Confidence            556666432      5678999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	99
d1b6aa1	74	a.4.5.25 (A:375-448) Methionine aminopeptidase, in	1e-07
d1b6aa2	295	d.127.1.1 (A:110-374,A:449-478) Methionine aminope	1e-04

>d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Methionine aminopeptidase, insert domain
domain: Methionine aminopeptidase, insert domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 1e-07
 Identities = 13/21 (61%), Positives = 18/21 (85%)

Query: 79 HDDMDVSHYMKNFEASYIPLR 99
          HDDM+ SHYMKNF+  ++P+R
Sbjct: 1  HDDMECSHYMKNFDVGHVPIR 21

>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 1e-04
 Identities = 30/39 (76%), Positives = 32/39 (82%)

Query: 43  HAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHDD 81
           HAGKTVPIV+GGE T MEE E YAIETFGSTGKG+V   
Sbjct: 230 HAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVDIK 268

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d1b6aa2	295	Methionine aminopeptidase {Human (Homo sapiens) [T	98.89
d1xgsa2	218	Methionine aminopeptidase {Archaeon Pyrococcus fur	98.44
d1qxya_	249	Methionine aminopeptidase {Staphylococcus aureus [	98.0
d1o0xa_	249	Methionine aminopeptidase {Thermotoga maritima [Ta	97.93
d2gg2a1	262	Methionine aminopeptidase {Escherichia coli [TaxId	97.85
d1pv9a2	221	Aminopeptidase P, C-terminal domain {Archaeon Pyro	97.21
d1chma2	246	Creatinase, catalytic (C-terminal) domain {Pseudom	96.68
d2v3za2	264	Aminopeptidase P, C-terminal domain {Escherichia c	96.61

>d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.9e-10  Score=83.42  Aligned_cols=63  Identities=54%  Similarity=0.805  Sum_probs=48.4

Q ss_pred             eEEEEecceeeeCCccceeeccc---cc-ccccCceeeeeeCCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         16 RFSIQIAPTKLSGPKPPIFIKHS---SR-SIHAGKTVPIVRGGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        16 ~~~~~~~~~~~s~~~~vVrnl~G---gy-~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      ++..+++...+  +..+++++.|   |. ..|..+.+|++..+++.+|+||||||||||+++|.|.|..
T Consensus       201 ~~~~~~~~~~~--~~~~~~~~~gHgiG~~~~~~~~~~~~~~~~~~~~Le~GmV~tIEP~i~~g~g~v~~  267 (295)
T d1b6aa2         201 SYEVEIDGKTY--QVKPIRNLNGHSIGQYRIHAGKTVPIVKGGEATRMEEGEVYAIETFGSTGKGVVDI  267 (295)
T ss_dssp             TCEEEETTEEE--ECEECTTCEEEEEBTTBSCCSCEEESSSSCCCCBCCTTCEEEEEEEEESSCSCCCS
T ss_pred             hhhhhhhhccC--cccceeccccccCcccccccccccccccCCCCCEeCCCCEEEEeCeeeCCCeEEcc
Confidence            34456666555  6778888866   54 4455557888888889999999999999999999998743

>d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.44  E-value=3.5e-08  Score=69.01  Aligned_cols=43  Identities=26%  Similarity=0.504  Sum_probs=35.3

Q ss_pred             eeeccc---c-cccccCceeeeee-CCCCeEeecCcEEEEeEeeeCCc
Q psy15502         33 IFIKHS---S-RSIHAGKTVPIVR-GGEGTLMEENEFYAIETFGSTGK   75 (99)
Q Consensus        33 Vrnl~G---g-y~lHegPsIPN~~-~g~~~~L~eGmV~AIEPF~TtG~   75 (99)
                      .+.+.|   | +.+|++|.+|++. .+++..|+|||||+|||+++.+.
T Consensus       147 ~~~~~GHgiG~~~~~~~~~~~~~~~~~~~~~le~GmV~tiEP~i~~~~  194 (218)
T d1xgsa2         147 IVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGA  194 (218)
T ss_dssp             CTTCCEEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEEECCEEESSC
T ss_pred             ccccccccccCcccccCcccccccccCCccEecCCCEEEECCEEEeCC
Confidence            344544   4 8899999999984 47888999999999999998653

>d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.00  E-value=1.1e-06  Score=61.71  Aligned_cols=53  Identities=23%  Similarity=0.167  Sum_probs=39.1

Q ss_pred             Cccceeeccc---ccccccCcee-eee-eCCCCeEeecCcEEEEeEeeeCCcceEEeC
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTV-PIV-RGGEGTLMEENEFYAIETFGSTGKGMVHDD   81 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsI-PN~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~~~   81 (99)
                      .....++++|   |...|+.|.. +++ ..+++.+|++||||||||+++.+...+...
T Consensus       158 ~~~~~~~~~gh~~G~~~~~~p~~~~~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~~~~  215 (249)
T d1qxya_         158 DLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEG  215 (249)
T ss_dssp             TCEECTTCCEEECSSSSSEEEEEECSSCCTTCCCBCCTTBEEEECCEEESSCSSCEEC
T ss_pred             cceeeecccccccccccccCCccccccccccCCccccCCceEEEeeeEecCCcceeec
Confidence            3344555555   8889999854 344 457889999999999999999877654443

>d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.93  E-value=2.5e-06  Score=59.45  Aligned_cols=47  Identities=26%  Similarity=0.290  Sum_probs=37.6

Q ss_pred             eeeccc---ccccccCceeeee-eCCCCeEeecCcEEEEeEeeeCCcceEE
Q psy15502         33 IFIKHS---SRSIHAGKTVPIV-RGGEGTLMEENEFYAIETFGSTGKGMVH   79 (99)
Q Consensus        33 Vrnl~G---gy~lHegPsIPN~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~   79 (99)
                      .+++.|   |..+|++|.++.+ ..+.+..|++||||+|||++..+...+.
T Consensus       163 ~~~~~GHgiG~~~~~~p~~~~~~~~~~~~~le~gMv~~iEp~~~~~~~~~~  213 (249)
T d1o0xa_         163 IRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVV  213 (249)
T ss_dssp             CCSSCEEECSSSSSEEEEECSCCCTTCSCBCCTTCEEEECCEEESSCCCEE
T ss_pred             ecCCcccccccCCCcCCccceeccCCCCccccCCeEEEecceeecCCCceE
Confidence            344555   8899999988877 4478899999999999999998765543

>d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Methionine aminopeptidase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=4.1e-06  Score=59.21  Aligned_cols=52  Identities=13%  Similarity=0.132  Sum_probs=41.5

Q ss_pred             Cccceeeccc---ccccccCceeeee-eCCCCeEeecCcEEEEeEeeeCCcceEEe
Q psy15502         29 PKPPIFIKHS---SRSIHAGKTVPIV-RGGEGTLMEENEFYAIETFGSTGKGMVHD   80 (99)
Q Consensus        29 ~~~vVrnl~G---gy~lHegPsIPN~-~~g~~~~L~eGmV~AIEPF~TtG~g~V~~   80 (99)
                      ++.++++++|   +..+|++|.+.+. ..++...|++|||++|||+.+.+.+.+..
T Consensus       159 g~~~~~~~~g~g~g~~~~~~p~~~~~~~~~~~~~L~~gmv~~iEp~~~~~~~~~~~  214 (262)
T d2gg2a1         159 GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRT  214 (262)
T ss_dssp             TCEECSSCCEEECSSSSSEEEEECSSCCTTCCCBCCTTCEEEECCEEESSCSCEEE
T ss_pred             CCCcccccccCCCCCCCCCCCccccccccccceEecCCeEEEeccccccCCCceEE
Confidence            3455677776   8889999988776 44788999999999999999988766543

>d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.21  E-value=8.8e-05  Score=50.91  Aligned_cols=36  Identities=19%  Similarity=0.093  Sum_probs=27.6

Q ss_pred             ccccccCceeeeeeCCCCeEeecCcEEEEeEeee-CCcce
Q psy15502         39 SRSIHAGKTVPIVRGGEGTLMEENEFYAIETFGS-TGKGM   77 (99)
Q Consensus        39 gy~lHegPsIPN~~~g~~~~L~eGmV~AIEPF~T-tG~g~   77 (99)
                      |+.+|+.|++   ..+++.+|++||||+|||++. .|.+-
T Consensus       163 g~~~~e~~~~---~~~~~~~L~~gMv~~iep~~~~~~~~g  199 (221)
T d1pv9a2         163 GLEIHEWPRI---SQYDETVLKEGMVITIEPGIYIPKLGG  199 (221)
T ss_dssp             SSSSSEEEEE---STTCCCBCCTTCEEEECCEEEETTTEE
T ss_pred             Ccccchhccc---ccCCCceeCCCcEEEECCEEEECCCCE
Confidence            8888886554   456777999999999999886 44443

>d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Creatinase, catalytic (C-terminal) domain
species: Pseudomonas putida [TaxId: 303]

Probab=96.68  E-value=0.00026  Score=49.08  Aligned_cols=34  Identities=15%  Similarity=0.064  Sum_probs=26.3

Q ss_pred             ccccccCc-eeeee-eCCCCeEeecCcEEEEeEeee
Q psy15502         39 SRSIHAGK-TVPIV-RGGEGTLMEENEFYAIETFGS   72 (99)
Q Consensus        39 gy~lHegP-sIPN~-~~g~~~~L~eGmV~AIEPF~T   72 (99)
                      |+..|..+ .++.. ..+++..|+|||||+|||.+.
T Consensus       171 G~~~~~~~~~~~~~~~~~~~~~L~~GMv~~iEp~i~  206 (246)
T d1chma2         171 GTLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIM  206 (246)
T ss_dssp             SBEETTEECCTTSBCCTTCCCBCCTTCEEEECCEEE
T ss_pred             CcccccccccccccccCCCceecCCCCEEEEcCeEE
Confidence            67777765 44433 557888999999999999875

>d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Creatinase/aminopeptidase
superfamily: Creatinase/aminopeptidase
family: Creatinase/aminopeptidase
domain: Aminopeptidase P, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.00029  Score=49.45  Aligned_cols=35  Identities=9%  Similarity=-0.005  Sum_probs=27.7

Q ss_pred             ccccccCce-eeeeeCCCCeEeecCcEEEEeEeeeC
Q psy15502         39 SRSIHAGKT-VPIVRGGEGTLMEENEFYAIETFGST   73 (99)
Q Consensus        39 gy~lHegPs-IPN~~~g~~~~L~eGmV~AIEPF~Tt   73 (99)
                      |+.+|..+. .|.+..++...|++||||+|||++..
T Consensus       177 G~~~~~~~~e~p~~~~~~~~~L~~gMv~~iEP~i~~  212 (264)
T d2v3za2         177 SHWLGLDVHDVGVYGQDRSRILEPGMVLTVAPGLYI  212 (264)
T ss_dssp             CCBCSSSSSCCSCCCGGGCCCCCTTCEEEECCEEEE
T ss_pred             CCccccCcccccccccccccccCCCcEEeecCCEEe
Confidence            777777774 45556677889999999999999873