Psyllid ID: psy15543

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MMLPLGTSGFDGTSNVLAGKMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAPIEELS
Secondary Structure (PSIPRED)
cEEEccccEEEcccccccccEEEEEEccccEEEcccccccccccccEEEEEEEccccEEEEEEccccccccccccEEEEEccccccEEEEEEcccEEEcccccccHHHHHHHHHHHHHcccHHHHHccccccccccccccccHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEccEEEEcccccccHHHHHHHccccEEEEcccccccccccccEEEEEEcccccEEEEEEEcccccccccccEEEEEccccccccEEEcccHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHccccccEEEEEEEccHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mmlplgtsgfdgtsnVLAGKMYNIFSSLSKKKkkkkkkkkpppgrkdcyrlyggdGHALIDLLQRSteaapevgsrvlcrhpfieskrayviptrveplhrpipdleQVRSRVKASLRTLRQDHkrnlnptpykvpiHVAVSDHLYSFIHELwlqnapieels
Flexible Loop (DISEMBL)
mmlplgtsgfdgtsnvLAGKMYNIFsslskkkkkkkkkkkpppgrkdcyrlyGGDGHALIDLLQRSTEAAPEvgsrvlcrhpfieskrayviptrveplhrpipdleqvrSRVKASLRTlrqdhkrnlnptpykVPIHVAVSDHLYSFIHELWlqnapieels
Low Complexity Region (SEG)
MMLPLGTSGFDGTSNVLAGKMYNIFSSLSkkkkkkkkkkkpppGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAPIEELS
Disordered region (IsUnstruct)
***********************************************CYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPI**************************PTPYKVPIHVAVSDHLYSFIHELWLQNA******
Disordered Region (DISOPRED)
MMLPLGTSGFDGTSNVLAGKMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAPIE***
Disordered Region (DISEMBL)
MMLPLGTSGFDGTSNVLAGKMYNIFSSL****************RKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAPIEELS
Disordered Region (DISPRO)
MMLPLGTSGFDGTSNVLAGKMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAP*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMLPLGTSGFDGTSNVLAGKMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQNAPIEELS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
Q9VQX4	555	Nicotinate phosphoribosyl	yes	N/A	0.785	0.230	0.605	5e-42
Q95XX1	562	Nicotinate phosphoribosyl	yes	N/A	0.815	0.236	0.452	7e-30
Q55G10	589	Nicotinate phosphoribosyl	yes	N/A	0.779	0.215	0.391	2e-24
Q6XQN6	538	Nicotinate phosphoribosyl	yes	N/A	0.760	0.230	0.294	2e-09
Q6P3H4	546	Nicotinate phosphoribosyl	yes	N/A	0.730	0.217	0.298	1e-07
Q6XQN1	538	Nicotinate phosphoribosyl	yes	N/A	0.730	0.221	0.318	0.0002
Q8CC86	538	Nicotinate phosphoribosyl	yes	N/A	0.711	0.215	0.328	0.0002

>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2

 Score =  169 bits (429), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 86/142 (60%), Positives = 102/142 (71%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  +  +K   PG K+ YRLY  DGHALIDLLQ+ +E  P VG +VLCRHPF ESKRAYV
Sbjct: 418 KLSQDVEKVTMPGNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYV 477

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IP+ VE L++           +P LEQVR +V+ SL+TLR DHKR LNPTPYK    VAV
Sbjct: 478 IPSHVESLYKVYWKSGKICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTPYK----VAV 533

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD+LY+FIH+LWLQNAPI ELS
Sbjct: 534 SDNLYNFIHDLWLQNAPIGELS 555

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 1

>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=3

 Score =  129 bits (325), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 92/148 (62%), Gaps = 15/148 (10%)

Query: 26  SSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIE 85
           S+  K K  +   K   PG+K CYR++G +G+A++DL+    E  P+   ++LCRHPF E
Sbjct: 418 SAQPKIKLSQDVTKITIPGKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEE 477

Query: 86  SKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLR-TLRQDHKRNLNPTPYK 134
           SKRA V   ++  LH           P+P L +++  V  S+R TLRQDH+R LNPTPYK
Sbjct: 478 SKRALVNANKIIKLHNVYWKDGEMITPLPTLNEIKEHVNESIRSTLRQDHRRYLNPTPYK 537

Query: 135 VPIHVAVSDHLYSFIHELWLQNAPIEEL 162
               V+VS+ LY F+H LWLQNAPI +L
Sbjct: 538 ----VSVSERLYQFLHTLWLQNAPIGQL 561

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum GN=naprt PE=2 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 21/148 (14%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLL-------QRSTEAAPEVGSRVLCRHPFI 84
           K  ++  K   PGRK  YRL+G +GH L+DLL       +  ++  P+VG +VLC HPF 
Sbjct: 445 KLSQEANKITLPGRKTAYRLFGSEGHPLVDLLVDDNDMIKDGSKQIPQVGKKVLCLHPFE 504

Query: 85  ESKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYK 134
           E KR  V P ++E LH           P+P L  +R      +  +R+DH RN NPTPYK
Sbjct: 505 EQKRVIVTPVQIEKLHHIVFEKGQLTMPLPALNDIREYCFQQISKVREDHLRNSNPTPYK 564

Query: 135 VPIHVAVSDHLYSFIHELWLQNAPIEEL 162
               V+V+  L+  +H LWL + PI+E+
Sbjct: 565 ----VSVTKELFDTLHNLWLDSVPIKEM 588

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1 SV=2

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 30  KKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRA 89
           + K  +  +K+  PG K  +RL G DG  L+D+LQ + E  P+ G  +    P  +    
Sbjct: 405 RMKLTEDPEKQTLPGSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEP-C 463

Query: 90  YVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHV 139
            V P +VEPL R          P+P L + R+  + SL  L  +H+R  +P  Y+    V
Sbjct: 464 TVRPAQVEPLLRLCLQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQ----V 519

Query: 140 AVSDHLYSFIHELWLQNAP 158
            +S+ L + ++ L    +P
Sbjct: 520 VLSERLQALVNSLCAGQSP 538

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN). Essential for NA to increase cellular NAD levels and prevent oxidative stress of the cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2 SV=2

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)

Query: 30  KKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESK-R 88
           + K  +  +K   PGRK  YRL   DGH  +D+L    EAAP  G  + C      S  +
Sbjct: 403 RMKLSEDPEKSTLPGRKAVYRLLDADGHPQMDVLCLCDEAAPAAGVELQCFSLLGNSTLQ 462

Query: 89  AYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIH 138
             + P +V  L            P+    + R R + SL+ L   HKR   P  Y     
Sbjct: 463 CSITPAQVSSLRTQVFSCGQITLPLNSASESRERAQISLQMLNPYHKRLQEPHNYT---- 518

Query: 139 VAVSDHLYSFIHEL 152
           VA+S+ L+S + ++
Sbjct: 519 VALSERLHSLVSDI 532

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 19/138 (13%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGS--RVLCRHPFIESKRA 89
           K  ++ +K+  PG K  +R    +G  L+DLLQ + E  P+ G   RV  +      +  
Sbjct: 407 KLTEESQKETLPGSKAAFRFLVSEGSLLLDLLQLAEEPPPKAGQELRVWLQGA---QEPC 463

Query: 90  YVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHV 139
            V P +VEPL R          P+P LE+ R+  + SL  LR  HK+  NP  Y+    V
Sbjct: 464 TVKPAQVEPLLRLYLQQGQPYEPLPSLEESRAFAQQSLSRLRPAHKQLQNPAVYQ----V 519

Query: 140 AVSDHLYSFIHELWLQNA 157
           A+S+ L + +  L  + A
Sbjct: 520 ALSEKLRALVDSLSARGA 537

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN). Essential for NA to increase cellular NAD levels and prevent oxidative stress of the cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 15/131 (11%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  +  +K+  PG K  +R  G DG  L+DLLQ + E  P+ G   L   P    +   V
Sbjct: 407 KLTEDPEKQTLPGSKAAFRFLGPDGSLLLDLLQLAEEPPPKAGQE-LRVWPRGTQEPCTV 465

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
            P +VEPL R          P+P L++ R   + SL  LR  HK+  +P  Y     VA+
Sbjct: 466 KPAQVEPLLRLYLQQGQLCEPLPSLDESRRFAQQSLSLLRPAHKQLQSPAVYP----VAL 521

Query: 142 SDHLYSFIHEL 152
           S+ L + +  L
Sbjct: 522 SEKLRALVDSL 532

Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN). Essential for NA to increase cellular NAD levels and prevent oxidative stress of the cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
118788703	519	AGAP008516-PA [Anopheles gambiae str. PE	0.785	0.246	0.669	3e-45
383862727	610	PREDICTED: nicotinate phosphoribosyltran	0.785	0.209	0.647	7e-45
383862725	548	PREDICTED: nicotinate phosphoribosyltran	0.785	0.233	0.647	8e-45
350410412	610	PREDICTED: nicotinate phosphoribosyltran	0.785	0.209	0.633	2e-44
340719441	610	PREDICTED: nicotinate phosphoribosyltran	0.785	0.209	0.633	2e-44
340719439	548	PREDICTED: nicotinate phosphoribosyltran	0.785	0.233	0.633	3e-44
242018851	563	nicotinate phosphoribosyltransferase, pu	0.717	0.207	0.664	5e-43
15042689	298	putative nicotinate phosphoribosyltransf	0.742	0.406	0.666	7e-43
170028299	287	conserved hypothetical protein [Culex qu	0.852	0.484	0.603	4e-42
380029684	611	PREDICTED: nicotinate phosphoribosyltran	0.717	0.191	0.664	7e-42

>gi|118788703|ref|XP_316922.3| AGAP008516-PA [Anopheles gambiae str. PEST] gi|37787323|gb|AAP69612.1| nicotinate phosphoribosyltransferase-like protein [Anopheles gambiae] gi|116122873|gb|EAA43816.3| AGAP008516-PA [Anopheles gambiae str. PEST]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/142 (66%), Positives = 106/142 (74%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  +   K   PG K+ +RLYG DGHALIDLLQR  E  PEVG +VLCRHPF ESKRAYV
Sbjct: 382 KLSQDVGKVTMPGSKNVFRLYGADGHALIDLLQRVDENPPEVGQKVLCRHPFQESKRAYV 441

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IPT+VEPL+R           +P LE+VR RV+ASLRTLRQDHKR LNPTPYK    VAV
Sbjct: 442 IPTQVEPLYRVYWAEGRVAQVLPSLEEVRERVQASLRTLRQDHKRTLNPTPYK----VAV 497

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD+LY+FIHELWLQNAPI ELS
Sbjct: 498 SDNLYNFIHELWLQNAPIGELS 519

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862727|ref|XP_003706835.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 2 [Megachile rotundata]

 Score =  185 bits (469), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 108/142 (76%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  ++  K   PG+KD +RLYG DG+ALIDLLQRSTE AP+V  +VLCRHPF ESKRAYV
Sbjct: 473 KLSQEVDKVTIPGKKDAFRLYGADGYALIDLLQRSTEEAPQVKQKVLCRHPFQESKRAYV 532

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IPTRVEPLH+          P+  L ++R+RV+ SL+TLR DHKRNLNPTPYK    VAV
Sbjct: 533 IPTRVEPLHKVYWKNGKLCQPLMTLHEIRNRVQESLKTLRNDHKRNLNPTPYK----VAV 588

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD LY+FIH+LWLQNAPI ELS
Sbjct: 589 SDDLYNFIHDLWLQNAPIGELS 610

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862725|ref|XP_003706834.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Megachile rotundata]

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 108/142 (76%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  ++  K   PG+KD +RLYG DG+ALIDLLQRSTE AP+V  +VLCRHPF ESKRAYV
Sbjct: 411 KLSQEVDKVTIPGKKDAFRLYGADGYALIDLLQRSTEEAPQVKQKVLCRHPFQESKRAYV 470

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IPTRVEPLH+          P+  L ++R+RV+ SL+TLR DHKRNLNPTPYK    VAV
Sbjct: 471 IPTRVEPLHKVYWKNGKLCQPLMTLHEIRNRVQESLKTLRNDHKRNLNPTPYK----VAV 526

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD LY+FIH+LWLQNAPI ELS
Sbjct: 527 SDDLYNFIHDLWLQNAPIGELS 548

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410412|ref|XP_003489037.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 2 [Bombus impatiens]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  ++  K   PG+KD +RLYG DG+ALIDLLQRSTE  P+V  +VLCRHPF ESKRAYV
Sbjct: 473 KLSQEVGKVTIPGKKDAFRLYGADGYALIDLLQRSTEEVPQVKHKVLCRHPFQESKRAYV 532

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IP+RVE LH+          P+P L+++R+RV+ SL+TLR DHKRNLNPTPYK    VAV
Sbjct: 533 IPSRVESLHKVYWKNGKLCQPLPTLQEIRNRVQESLKTLRNDHKRNLNPTPYK----VAV 588

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD LY+FIH+LWLQNAPI ELS
Sbjct: 589 SDDLYNFIHDLWLQNAPIGELS 610

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719441|ref|XP_003398162.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 2 [Bombus terrestris]

 Score =  183 bits (464), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  ++  K   PG+KD +RLYG DG+ALIDLLQRSTE  P+V  +VLCRHPF ESKRAYV
Sbjct: 473 KLSQEVGKVTIPGKKDAFRLYGADGYALIDLLQRSTEEVPQVKHKVLCRHPFQESKRAYV 532

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IP+RVE LH+          P+P L+++R+RV+ SL+TLR DHKRNLNPTPYK    VAV
Sbjct: 533 IPSRVESLHKVYWKNGKLCQPLPTLQEIRNRVQESLKTLRNDHKRNLNPTPYK----VAV 588

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD LY+FIH+LWLQNAPI ELS
Sbjct: 589 SDDLYNFIHDLWLQNAPIGELS 610

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719439|ref|XP_003398161.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Bombus terrestris] gi|350410409|ref|XP_003489036.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Bombus impatiens]

 Score =  182 bits (463), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 108/142 (76%), Gaps = 14/142 (9%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K  ++  K   PG+KD +RLYG DG+ALIDLLQRSTE  P+V  +VLCRHPF ESKRAYV
Sbjct: 411 KLSQEVGKVTIPGKKDAFRLYGADGYALIDLLQRSTEEVPQVKHKVLCRHPFQESKRAYV 470

Query: 92  IPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
           IP+RVE LH+          P+P L+++R+RV+ SL+TLR DHKRNLNPTPYK    VAV
Sbjct: 471 IPSRVESLHKVYWKNGKLCQPLPTLQEIRNRVQESLKTLRNDHKRNLNPTPYK----VAV 526

Query: 142 SDHLYSFIHELWLQNAPIEELS 163
           SD LY+FIH+LWLQNAPI ELS
Sbjct: 527 SDDLYNFIHDLWLQNAPIGELS 548

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242018851|ref|XP_002429884.1| nicotinate phosphoribosyltransferase, putative [Pediculus humanus corporis] gi|212514918|gb|EEB17146.1| nicotinate phosphoribosyltransferase, putative [Pediculus humanus corporis]

 Score =  178 bits (452), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/131 (66%), Positives = 100/131 (76%), Gaps = 14/131 (10%)

Query: 43  PGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR- 101
           PG+K  YRLYG DGHALIDL+Q++ E  P+VG +VLCRHPF ESKRAYVIP RVEPL++ 
Sbjct: 437 PGKKTAYRLYGSDGHALIDLMQKADEKPPQVGKKVLCRHPFQESKRAYVIPARVEPLYKV 496

Query: 102 ---------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                    P+P LE+VR RV+  L TLR DHKRNLNPTPYK    VAVSD LY+FIH+L
Sbjct: 497 WWSNGRITHPLPGLEEVRHRVQTCLETLRNDHKRNLNPTPYK----VAVSDELYNFIHDL 552

Query: 153 WLQNAPIEELS 163
           WLQNAPI ELS
Sbjct: 553 WLQNAPIGELS 563

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|15042689|gb|AAK82414.1|AF395330_1 putative nicotinate phosphoribosyltransferase [Aedes aegypti]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 90/135 (66%), Positives = 102/135 (75%), Gaps = 14/135 (10%)

Query: 39  KKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEP 98
           K   PG K+ +RLYG DGHALIDLLQR  E+ PEVG +VLCRHPF  SKRAYVIPT VEP
Sbjct: 168 KVTMPGNKNVFRLYGADGHALIDLLQRVDESPPEVGQKVLCRHPFQGSKRAYVIPTHVEP 227

Query: 99  LH----------RPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSF 148
           L+          + +P LE+VR RV+ SLRTLRQDHKR LNPTPYK    VAVSD+LY+F
Sbjct: 228 LYDVYWADGRVTQAMPSLEEVRDRVQNSLRTLRQDHKRTLNPTPYK----VAVSDNLYNF 283

Query: 149 IHELWLQNAPIEELS 163
           IH+LWLQNAPI ELS
Sbjct: 284 IHDLWLQNAPIGELS 298

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028299|ref|XP_001842033.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167874188|gb|EDS37571.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/154 (60%), Positives = 110/154 (71%), Gaps = 15/154 (9%)

Query: 20  KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLC 79
           KM  I +S  + K  +   K   PG K+ +RLYG DGHALIDLLQR  E+ PEVG +VLC
Sbjct: 139 KMVEI-NSQPRIKLSQDVAKVTMPGNKNVFRLYGADGHALIDLLQRVDESPPEVGQKVLC 197

Query: 80  RHPFIESKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLN 129
           RHPF ESKRAYVIPT VE L++           +P L++VR RV+ SL+TLRQDHKR LN
Sbjct: 198 RHPFQESKRAYVIPTHVEALYKVYWADGRVTQAMPSLDEVRERVQNSLKTLRQDHKRTLN 257

Query: 130 PTPYKVPIHVAVSDHLYSFIHELWLQNAPIEELS 163
           PTPYK    VAVSD+LY+FIH+LWLQNAPI ELS
Sbjct: 258 PTPYK----VAVSDNLYNFIHDLWLQNAPIGELS 287

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029684|ref|XP_003698497.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Apis florea]

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 87/131 (66%), Positives = 102/131 (77%), Gaps = 14/131 (10%)

Query: 43  PGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR- 101
           PG+K  +RLYG DG ALIDLLQRSTE  P+V  +VLCRHPF ESKRAYVIPTRVEPLH+ 
Sbjct: 485 PGKKVAFRLYGADGCALIDLLQRSTEEIPQVKHKVLCRHPFQESKRAYVIPTRVEPLHKV 544

Query: 102 ---------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                    P+  L+++R++V+ SLRTLR DHKRNLNPTPYK    VAVSD LY+FIH+L
Sbjct: 545 YWKNGKLCQPLLTLQEIRNKVQESLRTLRNDHKRNLNPTPYK----VAVSDDLYNFIHDL 600

Query: 153 WLQNAPIEELS 163
           WLQ+API ELS
Sbjct: 601 WLQHAPIGELS 611

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
FB|FBgn0031589	555	CG3714 [Drosophila melanogaste	0.711	0.209	0.638	1.4e-44
WB|WBGene00021882	562	Y54G2A.17 [Caenorhabditis eleg	0.705	0.204	0.476	3.2e-32
UNIPROTKB|Q95XX1	562	Y54G2A.17 "Nicotinate phosphor	0.705	0.204	0.476	3.2e-32
TAIR|locus:2046872	557	NAPRT2 "nicotinate phosphoribo	0.699	0.204	0.484	9.9e-30
TAIR|locus:2115095	559	NAPRT1 "nicotinate phosphoribo	0.699	0.203	0.469	2.2e-28
DICTYBASE|DDB_G0268472	589	naprt "nicotinate phosphoribos	0.705	0.195	0.404	1e-23
UNIPROTKB|F1NA80	383	NAPRT1 "Uncharacterized protei	0.662	0.281	0.346	2.4e-14
UNIPROTKB|F1NY99	539	NAPRT1 "Uncharacterized protei	0.662	0.200	0.346	8e-14
UNIPROTKB|Q6XQN6	538	NAPRT1 "Nicotinate phosphoribo	0.674	0.204	0.304	5.5e-11
UNIPROTKB|C9JC60	566	NAPRT1 "Nicotinate phosphoribo	0.595	0.171	0.330	2.2e-10

FB|FBgn0031589 CG3714 [Drosophila melanogaster (taxid:7227)]

 Score = 404 (147.3 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
 Identities = 83/130 (63%), Positives = 97/130 (74%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G K+ YRLY  DGHALIDLLQ+ +E  P VG +VLCRHPF ESKRAYVIP+ VE L++  
Sbjct:   430 GNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYVIPSHVESLYKVY 489

Query:   102 --------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELW 153
                      +P LEQVR +V+ SL+TLR DHKR LNPTPYKV    AVSD+LY+FIH+LW
Sbjct:   490 WKSGKICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTPYKV----AVSDNLYNFIHDLW 545

Query:   154 LQNAPIEELS 163
             LQNAPI ELS
Sbjct:   546 LQNAPIGELS 555

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=ISS

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

WB|WBGene00021882 Y54G2A.17 [Caenorhabditis elegans (taxid:6239)]

 Score = 311 (114.5 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
 Identities = 62/130 (47%), Positives = 85/130 (65%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G+K CYR++G +G+A++DL+    E  P+   ++LCRHPF ESKRA V   ++  LH   
Sbjct:   436 GKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEESKRALVNANKIIKLHNVY 495

Query:   102 --------PIPDLEQVRSRVKASLR-TLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                     P+P L +++  V  S+R TLRQDH+R LNPTPYKV    +VS+ LY F+H L
Sbjct:   496 WKDGEMITPLPTLNEIKEHVNESIRSTLRQDHRRYLNPTPYKV----SVSERLYQFLHTL 551

Query:   153 WLQNAPIEEL 162
             WLQNAPI +L
Sbjct:   552 WLQNAPIGQL 561

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|Q95XX1 Y54G2A.17 "Nicotinate phosphoribosyltransferase" [Caenorhabditis elegans (taxid:6239)]

 Score = 311 (114.5 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
 Identities = 62/130 (47%), Positives = 85/130 (65%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G+K CYR++G +G+A++DL+    E  P+   ++LCRHPF ESKRA V   ++  LH   
Sbjct:   436 GKKKCYRIFGKNGYAILDLMMLEDEPEPQPNQQILCRHPFEESKRALVNANKIIKLHNVY 495

Query:   102 --------PIPDLEQVRSRVKASLR-TLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                     P+P L +++  V  S+R TLRQDH+R LNPTPYKV    +VS+ LY F+H L
Sbjct:   496 WKDGEMITPLPTLNEIKEHVNESIRSTLRQDHRRYLNPTPYKV----SVSERLYQFLHTL 551

Query:   153 WLQNAPIEEL 162
             WLQNAPI +L
Sbjct:   552 WLQNAPIGQL 561

GO:0005829 "cytosol" evidence=ISS

GO:0006979 "response to oxidative stress" evidence=ISS

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=ISS

TAIR|locus:2046872 NAPRT2 "nicotinate phosphoribosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 9.9e-30, Sum P(2) = 9.9e-30
 Identities = 63/130 (48%), Positives = 79/130 (60%)

Query:    45 RKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPL----- 99
             +K  YRLYG +G+ L+D++    E  P+VG R+LCRHPF ESKRAYV+P RVE L     
Sbjct:   431 KKRSYRLYGKEGYPLVDIMTGENEPPPKVGERLLCRHPFNESKRAYVVPQRVEELLKCYW 490

Query:   100 -------HRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                       +P L+++R R    L  +R DH R LNPTPYKV    +VS  LY FIH L
Sbjct:   491 RGSADEAREVLPPLKEIRDRCIKQLENMRPDHMRRLNPTPYKV----SVSAKLYDFIHFL 546

Query:   153 WLQNAPIEEL 162
             WL  AP+ EL
Sbjct:   547 WLNEAPVGEL 556

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA;ISS

GO:0019363 "pyridine nucleotide biosynthetic process" evidence=IEA

TAIR|locus:2115095 NAPRT1 "nicotinate phosphoribosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
 Identities = 61/130 (46%), Positives = 79/130 (60%)

Query:    45 RKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPL----- 99
             +K  YRL+G +G+ L+D++    E  P+VG R+LCRHPF ESKRAYV+P RVE L     
Sbjct:   433 KKRTYRLFGKEGYPLVDIMTGENEPPPKVGERLLCRHPFNESKRAYVVPQRVEELLKCYW 492

Query:   100 -------HRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
                       +  L+++R+R    L  +R DH R LNPTPYKV    +VS  LY FIH L
Sbjct:   493 RGNADEAREELEPLKELRNRCIKQLENMRPDHMRRLNPTPYKV----SVSAKLYDFIHFL 548

Query:   153 WLQNAPIEEL 162
             WL  AP+ EL
Sbjct:   549 WLNEAPVGEL 558

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA;ISS

GO:0019363 "pyridine nucleotide biosynthetic process" evidence=IEA

DICTYBASE|DDB_G0268472 naprt "nicotinate phosphoribosyltransferase-like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 258 (95.9 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 55/136 (40%), Positives = 77/136 (56%)

Query:    44 GRKDCYRLYGGDGHALIDLL-------QRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRV 96
             GRK  YRL+G +GH L+DLL       +  ++  P+VG +VLC HPF E KR  V P ++
Sbjct:   457 GRKTAYRLFGSEGHPLVDLLVDDNDMIKDGSKQIPQVGKKVLCLHPFEEQKRVIVTPVQI 516

Query:    97 EPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLY 146
             E LH           P+P L  +R      +  +R+DH RN NPTPYKV    +V+  L+
Sbjct:   517 EKLHHIVFEKGQLTMPLPALNDIREYCFQQISKVREDHLRNSNPTPYKV----SVTKELF 572

Query:   147 SFIHELWLQNAPIEEL 162
               +H LWL + PI+E+
Sbjct:   573 DTLHNLWLDSVPIKEM 588

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0019363 "pyridine nucleotide biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|F1NA80 NAPRT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 146 (56.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
 Identities = 43/124 (34%), Positives = 62/124 (50%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G K  YRLY   GH  +DL+    E +P VG  +         +   + P+ V+PLHR  
Sbjct:   264 GIKAIYRLYDAAGHPFMDLMALENEPSPSVGQELAVHILGRRGEATKIRPSAVKPLHRMY 323

Query:   102 --------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELW 153
                      +P L++VRS  +ASL  L   H++  +P PY  P  VAV++ L+  + EL 
Sbjct:   324 LRDGQVCEELPSLQEVRSHAQASLNLLSPVHRQLRDPQPY--P--VAVTEKLHLLLVEL- 378

Query:   154 LQNA 157
              QNA
Sbjct:   379 -QNA 381

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

UNIPROTKB|F1NY99 NAPRT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 146 (56.5 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
 Identities = 43/124 (34%), Positives = 62/124 (50%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G K  YRLY   GH  +DL+    E +P VG  +         +   + P+ V+PLHR  
Sbjct:   420 GIKAIYRLYDAAGHPFMDLMALENEPSPSVGQELAVHILGRRGEATKIRPSAVKPLHRMY 479

Query:   102 --------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELW 153
                      +P L++VRS  +ASL  L   H++  +P PY  P  VAV++ L+  + EL 
Sbjct:   480 LRDGQVCEELPSLQEVRSHAQASLNLLSPVHRQLRDPQPY--P--VAVTEKLHLLLVEL- 534

Query:   154 LQNA 157
              QNA
Sbjct:   535 -QNA 537

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

UNIPROTKB|Q6XQN6 NAPRT1 "Nicotinate phosphoribosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 133 (51.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 38/125 (30%), Positives = 60/125 (48%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G K  +RL G DG  L+D+LQ + E  P+ G  +    P  +     V P +VEPL R  
Sbjct:   419 GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEP-CTVRPAQVEPLLRLC 477

Query:   102 --------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELW 153
                     P+P L + R+  + SL  L  +H+R  +P  Y+V     +S+ L + ++ L 
Sbjct:   478 LQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQV----VLSERLQALVNSLC 533

Query:   154 LQNAP 158
                +P
Sbjct:   534 AGQSP 538

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IDA;TAS

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0006766 "vitamin metabolic process" evidence=TAS

GO:0006767 "water-soluble vitamin metabolic process" evidence=TAS

GO:0006769 "nicotinamide metabolic process" evidence=TAS

GO:0019674 "NAD metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

UNIPROTKB|C9JC60 NAPRT1 "Nicotinate phosphoribosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 128 (50.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
 Identities = 37/112 (33%), Positives = 54/112 (48%)

Query:    44 GRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR-- 101
             G K  +RL G DG  L+D+LQ + E  P+ G  +    P  +     V P +VEPL R  
Sbjct:   419 GSKAAFRLLGSDGSPLMDMLQLAEEPVPQAGQELRVWPPGAQEP-CTVRPAQVEPLLRLC 477

Query:   102 --------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKV----PIHVAV 141
                     P+P L + R+  + SL  L  +H+R  +P  Y+V    P H A+
Sbjct:   478 LQQGQLCEPLPSLAESRALAQLSLSRLSPEHRRLRSPAQYQVGGGPPCHSAL 529

GO:0004514 "nicotinate-nucleotide diphosphorylase (carboxylating) activity" evidence=IEA

GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA

GO:0009435 "NAD biosynthetic process" evidence=IEA

GO:0019358 "nicotinate nucleotide salvage" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VQX4	PNCB_DROME	2, ., 4, ., 2, ., 1, 1	0.6056	0.7852	0.2306	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	163
PLN02885	545	PLN02885, PLN02885, nicotinate phosphoribosyltrans	3e-53
PRK09243	464	PRK09243, PRK09243, nicotinate phosphoribosyltrans	2e-16
TIGR01513	443	TIGR01513, NAPRTase_put, putative nicotinate phosp	5e-10
PRK09243	464	PRK09243, PRK09243, nicotinate phosphoribosyltrans	1e-04
PRK12484	443	PRK12484, PRK12484, nicotinate phosphoribosyltrans	4e-04
cd01570	327	cd01570, NAPRTase_A, Nicotinate phosphoribosyltran	9e-04
COG1488	405	COG1488, PncB, Nicotinic acid phosphoribosyltransf	0.003

>gnl|CDD|178473 PLN02885, PLN02885, nicotinate phosphoribosyltransferase

 Score =  176 bits (448), Expect = 3e-53
 Identities = 66/133 (49%), Positives = 82/133 (61%), Gaps = 16/133 (12%)

Query: 43  PGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHR- 101
           P +K CYRLYG +G+ L+DL+    E  P+VG R+LCRHPF ESKRAYV+P RVE L + 
Sbjct: 417 PCKKRCYRLYGKEGYPLVDLMTGENEPPPKVGERILCRHPFNESKRAYVVPQRVEELLKC 476

Query: 102 -----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIH 150
                       +P L+++R R    L  +R DH R LNPTPYK    V+VS  LY FIH
Sbjct: 477 YWDGSSGKPREELPSLKEIRERCMKQLERMRPDHMRRLNPTPYK----VSVSAKLYDFIH 532

Query: 151 ELWLQNAPIEELS 163
            LWL  AP+ EL 
Sbjct: 533 FLWLNEAPVGELQ 545

Length = 545

>gnl|CDD|236426 PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated

 Score = 75.2 bits (186), Expect = 2e-16
 Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 13/114 (11%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K     +K   PGRK  YR+Y   G A  D++   T A  E    +   HP    K   V
Sbjct: 348 KLSNSPEKVTTPGRKQVYRIYDKGGKAEADVI---TLADEEEEEPLKMFHPVHTYKSKTV 404

Query: 92  IPTRVEPLHRPI----------PDLEQVRSRVKASLRTLRQDHKRNLNPTPYKV 135
                EPL  P+          P LE++R+   A L +L +++KR LNP  Y V
Sbjct: 405 KNFDAEPLLVPVMENGKRVYELPSLEEIRAYAAAQLASLPEEYKRLLNPHAYPV 458

Length = 464

>gnl|CDD|233446 TIGR01513, NAPRTase_put, putative nicotinate phosphoribosyltransferase

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 30  KKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRA 89
             K  +  +K   PGRK  +RLY   G  L D L  + E   ++     C   F   +  
Sbjct: 333 VMKLSENPEKSTLPGRKQVFRLYDATGKFLGDELTLADEPIEDLNQEK-CTPVFAPVEPL 391

Query: 90  YVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHL 145
             +  +     RP+P L ++R+R +  L  L  ++ R LNP  Y     V++S  L
Sbjct: 392 LRLVMKNGQRVRPLPSLAEIRARAREQLSKLPPEYLRLLNPHVYP----VSLSPRL 443

A deep split separates two related families of proteins, one of which includes experimentally characterized examples of nicotinate phosphoribosyltransferase, an the first enzyme of NAD salvage biosynthesis. This model represents the other family. Members have a different (longer) spacing of several key motifs and have an additional C-terminal domain of up to 100 residues. One argument suggesting that this family represents the same enzyme is that no species has a member of both families. Another is that the gene encoding this protein is located near other NAD salvage biosynthesis genes in Nostoc and in at least four different Gram-positive bacteria. NAD and NADP are ubiquitous in life. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]. Length = 443

>gnl|CDD|236426 PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated

 Score = 40.5 bits (96), Expect = 1e-04
 Identities = 13/16 (81%), Positives = 13/16 (81%)

Query: 9   GFDGTSNVLAGKMYNI 24
           GFD TSNVLAGK Y I
Sbjct: 181 GFDATSNVLAGKRYGI 196

Length = 464

>gnl|CDD|237112 PRK12484, PRK12484, nicotinate phosphoribosyltransferase; Provisional

 Score = 39.3 bits (92), Expect = 4e-04
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 17/110 (15%)

Query: 43  PGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRP 102
           PGRK  +RLY   G A  D++   TE  P+ G   L        +R    PT        
Sbjct: 346 PGRKQVFRLYEH-GTACGDVIGLHTENIPD-GREPLLVPVMTNGRRIQHAPT-------- 395

Query: 103 IPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
              L+  R   +A L  L  + +R ++P    V + V +S  L    H  
Sbjct: 396 ---LDGARDWCEAQLAALPPEARRLVDP----VAVSVTLSGELARLRHAD 438

Length = 443

>gnl|CDD|238804 cd01570, NAPRTase_A, Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A

 Score = 37.9 bits (89), Expect = 9e-04
 Identities = 14/16 (87%), Positives = 15/16 (93%)

Query: 9   GFDGTSNVLAGKMYNI 24
           GFDGTSNVLAGK+Y I
Sbjct: 172 GFDGTSNVLAGKLYGI 187

Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi). Length = 327

>gnl|CDD|224405 COG1488, PncB, Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism]

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 13/19 (68%), Positives = 13/19 (68%)

Query: 9   GFDGTSNVLAGKMYNIFSS 27
           GFDGTSNVLA K Y I   
Sbjct: 184 GFDGTSNVLAAKKYGIKPI 202

Length = 405

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
PLN02885	545	nicotinate phosphoribosyltransferase	100.0
PRK09243	464	nicotinate phosphoribosyltransferase; Validated	99.94
TIGR01513	443	NAPRTase_put putative nicotinate phosphoribosyltra	99.93
PRK12484	443	nicotinate phosphoribosyltransferase; Provisional	99.93
KOG2511|consensus	420		99.03
PRK09198	463	putative nicotinate phosphoribosyltransferase; Pro	98.78
PHA02594	470	nadV nicotinamide phosphoribosyl transferase; Prov	98.61
COG1488	405	PncB Nicotinic acid phosphoribosyltransferase [Coe	98.06
PRK05321	400	nicotinate phosphoribosyltransferase; Provisional	97.68
TIGR01514	394	NAPRTase nicotinate phosphoribosyltransferase. Thi	97.32
PF04095	245	NAPRTase: Nicotinate phosphoribosyltransferase (NA	96.29
PRK08662	343	nicotinate phosphoribosyltransferase; Reviewed	94.37

>PLN02885 nicotinate phosphoribosyltransferase

Probab=100.00  E-value=7.6e-37  Score=276.56  Aligned_cols=153  Identities=48%  Similarity=0.831  Sum_probs=139.5

Q ss_pred             ccCCCCCCC---Cccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCCCCceEEe
Q psy15543          6 GTSGFDGTS---NVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCR   80 (163)
Q Consensus         6 ~~~~~~~~~---paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~~~~l~~~   80 (163)
                      |....-+|+   |+|||  |||+++ |+|+||+|++++|.|+||+|||||+||.+|++.+|+|++.+|..+..+++++|+
T Consensus       376 GVGT~LvT~~~~p~l~~VyKLVe~~-g~p~~KlS~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~~~~~~~  454 (545)
T PLN02885        376 GIGTHLVTCYAQPALGCVYKLVEIN-GQPRIKLSEDVEKVTIPCKKRCYRLYGKEGYPLVDLMTGENEPPPKVGERILCR  454 (545)
T ss_pred             ecCCccccCCCCCCCceEEEEEEEC-CeeeeEecCCCCCccCCcceEEEEEEcCCCCEEEEEEecCCCCCCCCCCceEEe
Confidence            333344554   99999  999998 999999999999999999999999998789999999999999745447899999


Q ss_pred             cCCCCcceeEecCCceeeCCC------------CCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHHHHH
Q psy15543         81 HPFIESKRAYVIPTRVEPLHR------------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSF  148 (163)
Q Consensus        81 ~p~~~~~~~~i~~~~~e~Ll~------------~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L~~l  148 (163)
                      ||.++++++.+.++++++||+            +.|+|++||+|++++|++||++++|+.||++|+|    ++|++||++
T Consensus       455 ~p~~~~~~~~~~~~~~~~Ll~~~~~~g~g~~~~~~~~l~~~r~~~~~~l~~l~~~~~r~~~p~~y~V----~~s~~l~~~  530 (545)
T PLN02885        455 HPFNESKRAYVVPQRVEELLKCYWDGSSGKPREELPSLKEIRERCMKQLERMRPDHMRRLNPTPYKV----SVSAKLYDF  530 (545)
T ss_pred             CCccchheeeeccccHHhhhHHHeECCCCcCcCCCCCHHHHHHHHHHHHhhCCHHHHhccCCcccee----ccCHHHHHH
Confidence            999999999999888888766            5689999999999999999999999999999999    999999999


Q ss_pred             HHHHHhhcCCCccCC
Q psy15543        149 IHELWLQNAPIEELS  163 (163)
Q Consensus       149 ~~~L~~~~~~~~~~~  163 (163)
                      +++|+.++++++|++
T Consensus       531 ~~~l~~~~~~~~~~~  545 (545)
T PLN02885        531 IHFLWLNEAPVGELQ  545 (545)
T ss_pred             HHHHHHhcCccccCC
Confidence            999999998988864

>PRK09243 nicotinate phosphoribosyltransferase; Validated

Probab=99.94  E-value=2.3e-27  Score=211.94  Aligned_cols=133  Identities=32%  Similarity=0.441  Sum_probs=116.6

Q ss_pred             ccCCCCCCC---Cccce--eEEEEe---CCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCCCCce
Q psy15543          6 GTSGFDGTS---NVLAG--KMYNIF---SSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRV   77 (163)
Q Consensus         6 ~~~~~~~~~---paL~g--KLVei~---~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~~~~l   77 (163)
                      |..+.-+|+   |+|++  |||+++   +|+|++|+|.+.+|.|+||+|||||+|+.+|.+.+|+|++.+|.+   ++++
T Consensus       314 GvGt~L~~~~~~~~l~~v~Klv~~~g~g~w~p~~K~s~~~~K~t~pG~k~v~R~~~~~~~~~~d~i~~~~e~~---~~~~  390 (464)
T PRK09243        314 GVGTKLVTGSDAPALGGVYKLVAIEGEGGMIPKIKLSNSPEKVTTPGRKQVYRIYDKGGKAEADVITLADEEE---EEPL  390 (464)
T ss_pred             EcCccccCCCCCCccceEEEEeEecCCCCccceeecccCCCCcCCCcceEEEEEEcCCCCcceEEEeccCCCc---cccc
Confidence            444444444   99999  999998   346999999999999999999999999878999999999998853   5789


Q ss_pred             EEecCCCCcceeEecCCceeeCCC----------CCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHH
Q psy15543         78 LCRHPFIESKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHL  145 (163)
Q Consensus        78 ~~~~p~~~~~~~~i~~~~~e~Ll~----------~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L  145 (163)
                      .|+||.++++++.+.++..++|++          +.|+|++||+|++++|++||++++||.||++|+|    .+|+.|
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~G~~~~~~~~l~~~r~~~~~~l~~l~~~~~~l~~p~~y~v----~~s~~l  464 (464)
T PRK09243        391 KMFHPVHTYKSKTVKNFDAEPLLVPVMENGKRVYELPSLEEIRAYAAAQLASLPEEYKRLLNPHAYPV----DLSQAL  464 (464)
T ss_pred             eeecccchhhhhcccccchhhhhHHHhcCCEEcCCCCCHHHHHHHHHHHHHhCCHHHhcccCCCceeE----EecCCC
Confidence            999999999999998776666665          7789999999999999999999999999999999    988764

>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase

Probab=99.93  E-value=3.3e-26  Score=203.52  Aligned_cols=134  Identities=28%  Similarity=0.387  Sum_probs=111.6

Q ss_pred             ccCCCCCC---CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCCCCceEEe
Q psy15543          6 GTSGFDGT---SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCR   80 (163)
Q Consensus         6 ~~~~~~~~---~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~~~~l~~~   80 (163)
                      |..+.-+|   .|+|++  |||+++ |+|++|+|++++|.|+||+|||||.|+.+|.+.+|+|++.+|..+. ++++.|+
T Consensus       305 GvGt~L~t~~~~~~l~~v~Klv~~~-G~pv~K~sd~~~K~t~pG~k~v~R~~~~~g~~~~d~i~~~~e~~~~-~~~~~~~  382 (443)
T TIGR01513       305 GVGTSLVTASDAPALGGVYKLVAYE-GRPVMKLSENPEKSTLPGRKQVFRLYDATGKFLGDELTLADEPIED-LNQEKCT  382 (443)
T ss_pred             ecCcceeecCCCCccceEEEEEeEC-CeeeEecCCCCcCccCCcceEEEEEeCCCCCeeeEEEEecCCCCcc-ccceeee
Confidence            44444443   599999  999998 9999999999999999999999999987899999999999987555 6778888


Q ss_pred             cCCCCcceeEecCCceeeCCCCCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHH
Q psy15543         81 HPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHL  145 (163)
Q Consensus        81 ~p~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L  145 (163)
                      ||..+.+.....-++.++++.+.+++++||+|+++||++||++++||.||++|+|    .+|++|
T Consensus       383 ~~~~~~~~ll~~v~~~G~~~~~~~~l~eir~~~~~~l~~l~~~~~rl~~p~~y~v----~~s~~l  443 (443)
T TIGR01513       383 PVFAPVEPLLRLVMKNGQRVRPLPSLAEIRARAREQLSKLPPEYLRLLNPHVYPV----SLSPRL  443 (443)
T ss_pred             cCCcchhcchhheeECCEEeCCCCCHHHHHHHHHHHHHhCCHHHhcccCCcccee----eccCCC
Confidence            8864433222222455677768899999999999999999999999999999999    888764

Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs.

>PRK12484 nicotinate phosphoribosyltransferase; Provisional

Probab=99.93  E-value=2.1e-25  Score=198.38  Aligned_cols=123  Identities=26%  Similarity=0.339  Sum_probs=104.9

Q ss_pred             CCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCCCCceEEecCCCCcceeE
Q psy15543         13 TSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAY   90 (163)
Q Consensus        13 ~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~~~~l~~~~p~~~~~~~~   90 (163)
                      ..|+|++  |||+++ +.|++|+|.  +|.|+||+|||||.|+. |.+.+|+|++.+|..+...++++.  |+       
T Consensus       317 ~~p~l~~v~Klv~~~-g~pv~K~s~--~K~t~pG~k~v~R~~~~-~~~~~d~i~~~~e~~~~~~~~ll~--~v-------  383 (443)
T PRK12484        317 DAPVLDSAYKLVAYE-GRGVTKLSS--GKVTYPGRKQVFRLYEH-GTACGDVIGLHTENIPDGREPLLV--PV-------  383 (443)
T ss_pred             CCCccceEEEEEEec-CCCeEEeCC--CCCCCCCceEEEEEcCC-CCceeEEEEecCCCCCCcccchhh--hh-------
Confidence            4599999  999998 999999985  89999999999999974 447999999999865432345554  42       


Q ss_pred             ecCCceeeCCCCCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHHHHHHHHHHhh
Q psy15543         91 VIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQ  155 (163)
Q Consensus        91 i~~~~~e~Ll~~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L~~l~~~L~~~  155 (163)
                      +   +.++++.+.+++++||+|++++|++||++++||.||++|+|    .+|++|++++++|+.+
T Consensus       384 ~---~~G~~~~~~~~l~eir~~~~~~l~~l~~~~~~l~~p~~y~v----~~s~~l~~~~~~l~~~  441 (443)
T PRK12484        384 M---TNGRRIQHAPTLDGARDWCEAQLAALPPEARRLVDPVAVSV----TLSGELARLRHADTAE  441 (443)
T ss_pred             e---ECCEEeCCCCCHHHHHHHHHHHHHhCCHHHHhccCCcccee----eeCHHHHHHHHHHHHh
Confidence            2   33456667889999999999999999999999999999999    9999999999999875

>KOG2511|consensus

Probab=99.03  E-value=5.2e-11  Score=102.86  Aligned_cols=71  Identities=41%  Similarity=0.631  Sum_probs=61.5

Q ss_pred             CCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCCCCceEEecCCCCcceeEecCCceeeC
Q psy15543         27 SLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPL   99 (163)
Q Consensus        27 ~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~~~~l~~~~p~~~~~~~~i~~~~~e~L   99 (163)
                      .+| ||+|+|..|.|+||.|.+||+|..+|.++.|++++++|+.+.+++.++|+||+. .++.++.|..++++
T Consensus       342 sqP-iKLseDvtkvSiP~~K~~~RLfg~eG~plvdi~~~~~ep~p~~gq~l~~khp~~-~~~~~vip~~ve~l  412 (420)
T KOG2511|consen  342 SQP-IKLSEDVTKVSIPGNKIVIRLFGKEGYPLVDISDLENEPPPDPGQVLRVKHPLN-SKRAYVIPQRVEEL  412 (420)
T ss_pred             cCC-cccccccceeccccchhheehhccCCchhhhHhhccCCCCCCCCceEEeecccc-ccccccchhhhHHH
Confidence            579 999999999999999999999999999999999999999888799999999987 55555555444444

>PRK09198 putative nicotinate phosphoribosyltransferase; Provisional

Probab=98.78  E-value=1.4e-08  Score=91.46  Aligned_cols=91  Identities=18%  Similarity=0.103  Sum_probs=65.4

Q ss_pred             cCccCCCCCCC---Cccce--eEEEEe---CCCCcee---ecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCC
Q psy15543          4 PLGTSGFDGTS---NVLAG--KMYNIF---SSLSKKK---KKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPE   72 (163)
Q Consensus         4 ~~~~~~~~~~~---paL~g--KLVei~---~~~PkmK---lS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~   72 (163)
                      -+|..++-+|+   |++|+  |||+++   +|+|++|   .|.  +|.|.||+|+|||.   +|..  |++.+.++..+ 
T Consensus       361 ~FGvGt~l~~~~~r~t~~~a~Kl~~~~~~G~~~~v~K~P~t~~--gK~S~~G~k~v~r~---~~~~--~~v~~~~~~~~-  432 (463)
T PRK09198        361 VFGMGGALLQYVNRDTQGFAMKASAIEVNGEWRDIFKDPITDQ--GKKSKKGRLKLIKD---NGEY--RTVDLDEAGDE-  432 (463)
T ss_pred             eEecCcccccCCCCCccCceEEEEEEeeCCccceeeccCcCCC--CCcCccceeEEEEc---CCcc--eEEeccccCCC-
Confidence            35666666666   99999  999875   4679999   554  79999999999996   4543  78877776432 


Q ss_pred             CCCceEEecCCCCcceeEecCCceeeCCCCCCCHHHHHHHHHHH
Q psy15543         73 VGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKAS  116 (163)
Q Consensus        73 ~~~~l~~~~p~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~  116 (163)
                       +++++.  |+          ++.++++. ..+|++||+|+.+.
T Consensus       433 -~~~lL~--~v----------~~~G~l~~-~~~l~eiR~r~~~~  462 (463)
T PRK09198        433 -NDDLLQ--TV----------FENGKLLV-EYSLAEIRARLHAA  462 (463)
T ss_pred             -ccchhh--hh----------eeCCEECC-CCCHHHHHHHHhhc
Confidence             455554  32          23345655 46799999999763

>PHA02594 nadV nicotinamide phosphoribosyl transferase; Provisional

Probab=98.61  E-value=7.4e-08  Score=86.83  Aligned_cols=93  Identities=23%  Similarity=0.205  Sum_probs=60.4

Q ss_pred             CccCCCCCC---CCccce--eEEEEe---CCCCceee-cCCCCCCCCCCcceEEEeecCCCCe-eeeEeecCCCCCCCCC
Q psy15543          5 LGTSGFDGT---SNVLAG--KMYNIF---SSLSKKKK-KKKKKKKPPPGRKDCYRLYGGDGHA-LIDLLQRSTEAAPEVG   74 (163)
Q Consensus         5 ~~~~~~~~~---~paL~g--KLVei~---~~~PkmKl-S~~~~K~T~PG~KqVyR~yd~~G~~-~~DvI~l~~E~~~~~~   74 (163)
                      +|..|.-+|   .|++++  ||++++   +|+|++|- -.+.+|.|.||+|+  |+++ +|.+ ..|.+  ..|..+. .
T Consensus       367 fGvGt~l~q~~~rdt~g~ayKl~~~~~~G~~~~~~K~Pktd~gK~S~~Gr~~--~~~~-~g~~~~~~~~--~~e~~~~-~  440 (470)
T PHA02594        367 FGMGGGLLQMVTRDTFKFAMKATAIKINGKWKGVFKNPKTDEGKKSKKGRLA--RVKD-GGSFKTVDGL--EEQSEAD-L  440 (470)
T ss_pred             EecCccceecCCCcccCceEEEEEEecCCceeeeeccCcCCCCCccccceeE--EEEc-CCceeEeeec--ccccccc-c
Confidence            455555554   499999  999985   35677864 22348999999999  5555 5665 45665  3332221 2


Q ss_pred             CceEEecCCCCcceeEecCCceeeCCCCCCCHHHHHHHHHHH
Q psy15543         75 SRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKAS  116 (163)
Q Consensus        75 ~~l~~~~p~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~  116 (163)
                      ++++.  |       +   ++.++++.+ +||++||+|++++
T Consensus       441 ~~lL~--~-------v---~~~G~~~~~-~sl~eiR~r~~~~  469 (470)
T PHA02594        441 NDALV--T-------Y---FDDGKLVRY-QSLAEIRERSDIQ  469 (470)
T ss_pred             cchhh--e-------e---eECCEECCC-CCHHHHHHHHHhc
Confidence            34443  2       2   344567666 8999999999875

>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism]

Probab=98.06  E-value=1.5e-06  Score=77.27  Aligned_cols=70  Identities=21%  Similarity=0.169  Sum_probs=49.7

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeec--CCCCeeeeEeecCCCCCCCCCCceEEecCCCCccee
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYG--GDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRA   89 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd--~~G~~~~DvI~l~~E~~~~~~~~l~~~~p~~~~~~~   89 (163)
                      .|++++  ||||++ +.|++|+|.+      ||+|++||.++  ..++..+|.+..         ++|+.  +       
T Consensus       332 ~~~~~~v~Klvev~-g~p~~Kis~~------Pgkk~~~r~~~~~~~~~~~~~~~~~---------~~l~~--~-------  386 (405)
T COG1488         332 RPPLDIVYKLVEVN-GKPVAKISKN------PGKKQVYRSAFVRELLVVFGDEITY---------EPLLV--K-------  386 (405)
T ss_pred             CCcceeEEEEEEEC-CccceeecCC------Cccceeecchhhhhhheeccccccc---------hhHHH--H-------
Confidence            477999  999998 9999999974      99999999885  355555554432         22221  1       


Q ss_pred             EecCCceeeCCCCCCCHHHHHHHHH
Q psy15543         90 YVIPTRVEPLHRPIPDLEQVRSRVK  114 (163)
Q Consensus        90 ~i~~~~~e~Ll~~~psL~~iR~~~~  114 (163)
                      +   ++.+ ++.+  +|++||+|++
T Consensus       387 ~---~~~G-~~~~--~l~~ir~~~~  405 (405)
T COG1488         387 V---FENG-LLYD--SLDEIRERAL  405 (405)
T ss_pred             H---HhCC-eecC--CHHHHHHhhC
Confidence            2   3445 4445  9999999973

>PRK05321 nicotinate phosphoribosyltransferase; Provisional

Probab=97.68  E-value=3.1e-05  Score=68.86  Aligned_cols=34  Identities=12%  Similarity=-0.125  Sum_probs=31.2

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceE
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDC   48 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqV   48 (163)
                      +|+|++  |||+++ |+|+||+|++++|.|.|...-+
T Consensus       349 ~p~l~~V~KLv~~~-g~P~~KlSd~~~K~t~p~~~~~  384 (400)
T PRK05321        349 VKPLNIVIKLVECN-GRPVAKLSDSPGKTMCDDPEFL  384 (400)
T ss_pred             CCCcceEEEEEEEC-CeeeEEecCCCcccCCCCHHHH
Confidence            799999  999998 9999999999999999987653

>TIGR01514 NAPRTase nicotinate phosphoribosyltransferase

Probab=97.32  E-value=0.00017  Score=64.09  Aligned_cols=28  Identities=14%  Similarity=-0.069  Sum_probs=26.3

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCC
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPP   42 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~   42 (163)
                      +|+|++  |||+++ |+|+||+|++++|.|-
T Consensus       349 ~~~l~~V~Klv~~~-g~P~~KlSd~~~K~t~  378 (394)
T TIGR01514       349 VEPLNIVIKLVECN-GNPVAKLSDSPGKTMG  378 (394)
T ss_pred             CCCcceEEEEEEEC-CccceEecCCCcccCC
Confidence            699999  999998 9999999999999984

This model represents nicotinate phosphoribosyltransferase, the first enzyme in the salvage pathway of NAD biosynthesis from nicontinate (niacin). Members are primary proteobacterial but also include yeasts and Methanosarcina acetivorans. A related family, apparently non-overlapping in species distribution, is TIGR01513. Members of that family differ in substantially in sequence and have a long C-terminal extension missing from this family, but are proposed also to act as nicotinate phosphoribosyltransferase (see model TIGR01513).

>PF04095 NAPRTase: Nicotinate phosphoribosyltransferase (NAPRTase) family; InterPro: IPR015977 Nicotinate phosphoribosyltransferase (2

Probab=96.29  E-value=0.00029  Score=58.57  Aligned_cols=38  Identities=24%  Similarity=0.222  Sum_probs=28.7

Q ss_pred             Cccce--eEEEEeCCCCceeecCCCCCCC---CCCcceEEEeec
Q psy15543         15 NVLAG--KMYNIFSSLSKKKKKKKKKKKP---PPGRKDCYRLYG   53 (163)
Q Consensus        15 paL~g--KLVei~~~~PkmKlS~~~~K~T---~PG~KqVyR~yd   53 (163)
                      |++++  ||++++ ++|++|+|++++|.|   .++.+.++|+|.
T Consensus       200 ~~l~~v~Klv~~~-~~P~~K~S~~~~K~t~~~~~~~~~~k~vf~  242 (245)
T PF04095_consen  200 PALNIVGKLVEIN-GQPVIKLSDDSEKGTCGDPEGIKYLKRVFE  242 (245)
T ss_dssp             EEEEEEEEEEEET-TEETTBGGSSTTGSSGGGHHHHHHHHHHEC
T ss_pred             ccceeCCeEEEeC-CCCCccCCCCCCCCcCCCHHHHHHHHHHhC
Confidence            55555  777777 999999999999999   345666666663

4.2.11 from EC) is the rate-limiting enzyme that catalyses the first reaction in the NAD salvage synthesis. This family also contains a number of closely related proteins for which a catalytic activity has not been experimentally demonstrated.; GO: 0004516 nicotinate phosphoribosyltransferase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm; PDB: 3OS4_B 1VLP_C 2F7F_A 1YIR_D 1YBE_B 2H3D_A 2H3B_B 2GVL_B 2IM5_B 2G96_B ....

>PRK08662 nicotinate phosphoribosyltransferase; Reviewed

Probab=94.37  E-value=0.027  Score=49.20  Aligned_cols=39  Identities=13%  Similarity=0.035  Sum_probs=29.1

Q ss_pred             CCCCCCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceE
Q psy15543          9 GFDGTSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDC   48 (163)
Q Consensus         9 ~~~~~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqV   48 (163)
                      ..-.++|.++.  |+|+++ |+|++|+|..++|.-+|-.++|
T Consensus       289 s~~~~a~~lDis~~iv~~~-g~~~~K~~~~~g~~~~~~~~~~  329 (343)
T PRK08662        289 TYISFAPPVDFSMDIVEVE-GKPIAKRGKLPGIKQVPRLKEI  329 (343)
T ss_pred             ccccCCCccceEEEEEEEC-CeeeEeecCCcccccCCCHHHH
Confidence            33345688888  999998 9999999976666666655554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	163
2f7f_A	494	Crystal Structure Of Enterococcus Faecalis Putative		8e-05

>pdb|2F7F|A Chain A, Crystal Structure Of Enterococcus Faecalis Putative Nicotinate Phosphoribosyltransferase, New York Structural Genomics Consortium Length = 494

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 17/96 (17%)
Query: 57  HALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKAS 116
           H  I+   R  EA P      + +  F+E KR Y +PT           L++++   K +
Sbjct: 401 HTFINKYVRDFEARP------VLQDIFVEGKRVYELPT-----------LDEIKQYAKEN 443
Query: 117 LRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHEL 152
           L +L +++KR+LNP  Y V +     +H  + + ++
Sbjct: 444 LDSLHEEYKRDLNPQKYPVDLSTDCWNHKMNLLEKV 479

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	163
2f7f_A	494	Nicotinate phosphoribosyltransferase, putative; st	2e-32
2i1o_A	398	Nicotinate phosphoribosyltransferase; ZIN ION, zin	4e-12
2i1o_A	398	Nicotinate phosphoribosyltransferase; ZIN ION, zin	9e-04
2i14_A	395	Nicotinate-nucleotide pyrophosphorylase; ligand bi	1e-08

>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1 Length = 494

 Score =  119 bits (299), Expect = 2e-32
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 14/134 (10%)

Query: 32  KKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYV 91
           K     +K   PG+K  +R+                   P     +   HP       YV
Sbjct: 349 KLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQEEEIYMFHPVHTFINKYV 408

Query: 92  IPTRVEPLHRPI----------PDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAV 141
                 P+ + I          P L++++   K +L +L +++KR+LNP  Y     V +
Sbjct: 409 RDFEARPVLQDIFVEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYP----VDL 464

Query: 142 SDHLYSFIHELWLQ 155
           S   ++    L  +
Sbjct: 465 STDCWNHKMNLLEK 478

>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Length = 398

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 13/98 (13%), Positives = 26/98 (26%), Gaps = 31/98 (31%)

Query: 34  KKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIP 93
           K + K+    GRK+  R        +                      P    ++  +  
Sbjct: 319 KPETKRGKMSGRKNVLRCTSCHRIEV---------------------VPANVQEKTCICG 357

Query: 94  TRVEPLHRPI----------PDLEQVRSRVKASLRTLR 121
             ++ L              P  +++RSR    L   +
Sbjct: 358 GSMQNLLVKYLSHGKRTSEYPRPKEIRSRSMKELEYFK 395

>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Length = 398

 Score = 37.7 bits (88), Expect = 9e-04
 Identities = 6/16 (37%), Positives = 9/16 (56%)

Query: 9   GFDGTSNVLAGKMYNI 24
           G DG S +L  K+ + 
Sbjct: 165 GADGVSGILGAKLIDQ 180

>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1 Length = 395

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 31/93 (33%)

Query: 38  KKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIPTRVE 97
           K+    GRK  YR   G  H +                         + +R  V   +VE
Sbjct: 320 KRGKLSGRKQVYRCENGHYHVV---------------------PANKKLERCPVCNAKVE 358

Query: 98  PLHRPI----------PDLEQVRSRVKASLRTL 120
           PL +PI          P   ++R  V    +  
Sbjct: 359 PLLKPIIENGEIVVEFPKAREIREYVLEQAKKF 391

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	163
2f7f_A	494	Nicotinate phosphoribosyltransferase, putative; st	99.97
2i14_A	395	Nicotinate-nucleotide pyrophosphorylase; ligand bi	99.51
2i1o_A	398	Nicotinate phosphoribosyltransferase; ZIN ION, zin	99.42
3dhf_A	484	Nicotinamide phosphoribosyltransferase; NMPRTASE,	99.07
1ybe_A	449	Naprtase, nicotinate phosphoribosyltransferase; st	98.27
2im5_A	394	Nicotinate phosphoribosyltransferase; structural g	98.2
1yir_A	408	Naprtase 2, nicotinate phosphoribosyltransferase 2	98.1
1vlp_A	441	Naprtase, nicotinate phosphoribosyltransferase; st	97.46
3os4_A	407	Naprtase, nicotinate phosphoribosyltransferase; st	96.92
4hl7_A	446	Naprtase, nicotinate phosphoribosyltransferase; st	96.88

>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1

Probab=99.97  E-value=1.7e-30  Score=232.38  Aligned_cols=137  Identities=23%  Similarity=0.361  Sum_probs=126.1

Q ss_pred             CCCccce--eEEEE---eCCC--CceeecCCCCCCCCCCcceEEEeec-CCCCeeeeEeecCCCCCCCCCCceEEecCCC
Q psy15543         13 TSNVLAG--KMYNI---FSSL--SKKKKKKKKKKKPPPGRKDCYRLYG-GDGHALIDLLQRSTEAAPEVGSRVLCRHPFI   84 (163)
Q Consensus        13 ~~paL~g--KLVei---~~~~--PkmKlS~~~~K~T~PG~KqVyR~yd-~~G~~~~DvI~l~~E~~~~~~~~l~~~~p~~   84 (163)
                      +.|++|+  |||++   + |+  |++|+|++++|.|+||+|+|||+|+ .+|++.+|+|++.+|.++. +++++|+||.+
T Consensus       324 ~~~~ld~v~Klv~~~~~~-G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~~~d~i~~~~e~~~~-~~~~~~~~p~~  401 (494)
T 2f7f_A          324 DQPALGAVFKLVSIEGED-GQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQ-EEEIYMFHPVH  401 (494)
T ss_dssp             TSCCCCCEEEEEEEECTT-SSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCGGG-CSEEEEECSSS
T ss_pred             CCCcccEEEEEEEEEcCC-CcCccccccCCCCCCcCCCCceEEEEEeecCCCeEEEEEEEecCCCCcc-ccceeeeCcch
Confidence            4699998  99999   6 77  9999999999999999999999998 6899999999999987554 67899999999


Q ss_pred             CcceeEecCCceeeCCC----------CCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHHHHHHHHHHh
Q psy15543         85 ESKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWL  154 (163)
Q Consensus        85 ~~~~~~i~~~~~e~Ll~----------~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L~~l~~~L~~  154 (163)
                      +|+++.+.++..++||+          +.|+|++||+|++++|++||++++||.|||+|+|    ++|++||+++++|+.
T Consensus       402 ~~~~~~~~~~~~~~ll~~v~~~G~~~~~~~~l~eir~~~~~~l~~l~~~~~r~~~p~~y~v----~~s~~l~~~~~~~~~  477 (494)
T 2f7f_A          402 TFINKYVRDFEARPVLQDIFVEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPV----DLSTDCWNHKMNLLE  477 (494)
T ss_dssp             TTSEEEEESEEEEECCEEEEETTEECCCCCCHHHHHHHHHHHHHHSCHHHHCSSSCCCCCE----EECHHHHHHHHHHHH
T ss_pred             hhhhccccCccchhhhhhhhcCCEEcCCCCCHHHHHHHHHHHHHhCCHHHhcccCCcCCcc----ccCHHHHHHHHHHHH
Confidence            99999998877777766          6789999999999999999999999999999999    999999999999996


Q ss_pred             h
Q psy15543        155 Q  155 (163)
Q Consensus       155 ~  155 (163)
                      +
T Consensus       478 ~  478 (494)
T 2f7f_A          478 K  478 (494)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1

Probab=99.51  E-value=3.8e-15  Score=129.90  Aligned_cols=89  Identities=12%  Similarity=0.134  Sum_probs=69.6

Q ss_pred             CCCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCC------CCCceEEecCC
Q psy15543         12 GTSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPE------VGSRVLCRHPF   83 (163)
Q Consensus        12 ~~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~------~~~~l~~~~p~   83 (163)
                      ...|++++  |||+++ |+|++|+|      ++||+|+|||+|+  |   +|+|++.+|.++.      ..++|+.    
T Consensus       299 ~~~~~ld~~~klv~~~-g~p~~K~s------~~pG~k~~~R~~~--~---~d~~~~~~e~~~~~~~~~~~~~~ll~----  362 (395)
T 2i14_A          299 ASAKPVDFALDIVEVE-GKPIAKRG------KLSGRKQVYRCEN--G---HYHVVPANKKLERCPVCNAKVEPLLK----  362 (395)
T ss_dssp             HTCCCCCCEEEEEEET-TEECCCTT------SCCSCEEEEEETT--S---CEEEEETTSCCCBCSSSCCBEEECCE----
T ss_pred             CCCCCccEEEEEEEeC-Ccceeeec------CCCCceEEEEEcC--C---ceEEEeCCCCCcccccccccccchhh----
Confidence            35799999  999998 99999999      6999999999986  4   5999999885331      0122222    


Q ss_pred             CCcceeEecCCceeeCCCCCCCHHHHHHHHHHHHhhccHhh
Q psy15543         84 IESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDH  124 (163)
Q Consensus        84 ~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~L~~Lp~~~  124 (163)
                           .+   ++.++++.+.|+|++||+|++++|++||+++
T Consensus       363 -----~~---~~~G~~~~~~~~l~~~r~~~~~~l~~l~~~~  395 (395)
T 2i14_A          363 -----PI---IENGEIVVEFPKAREIREYVLEQAKKFNLEI  395 (395)
T ss_dssp             -----EE---EBTTBCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             -----hh---hcCCEECCCCCCHHHHHHHHHHHHHhCCCCC
Confidence                 12   3345677788999999999999999999863

>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A

Probab=99.42  E-value=3.6e-14  Score=123.89  Aligned_cols=87  Identities=14%  Similarity=0.193  Sum_probs=67.2

Q ss_pred             CCCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeE-eecCCCCCCC-----CCCceEEecCC
Q psy15543         12 GTSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDL-LQRSTEAAPE-----VGSRVLCRHPF   83 (163)
Q Consensus        12 ~~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~Dv-I~l~~E~~~~-----~~~~l~~~~p~   83 (163)
                      ...|++++  |||+++ |+|++|+|      |+||+|||||+|+  |   +|+ |++.+|+++.     ..++|+.  | 
T Consensus       302 ~~~~~ld~~~Klv~~~-g~p~~K~s------~~pG~k~~~r~~~--~---~d~~~~~~~~~~~~~~~~~~~~~ll~--~-  366 (398)
T 2i1o_A          302 SSAKPFDFAMDIVEVN-GKPETKRG------KMSGRKNVLRCTS--C---HRIEVVPANVQEKTCICGGSMQNLLV--K-  366 (398)
T ss_dssp             HTCCCCCEEEEEEEET-TEECCCTT------SCCSCEEEEEETT--T---CCEEEEETTCCEECCSSSSCEEECCE--E-
T ss_pred             CCCCCccEEEEEEEeC-CcceEeec------CCCCceEEEEEcC--C---CeEEEEecCCCCcccccCccccchhh--h-
Confidence            35699999  999998 99999999      6999999999986  4   599 9998875321     0123322  1 


Q ss_pred             CCcceeEecCCceeeCCCCCCCHHHHHHHHHHHHhhccH
Q psy15543         84 IESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQ  122 (163)
Q Consensus        84 ~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~L~~Lp~  122 (163)
                            ++   +.++++.+.|+|++||+|++++|++||.
T Consensus       367 ------~~---~~G~~~~~~~~l~~~r~~~~~~l~~l~~  396 (398)
T 2i1o_A          367 ------YL---SHGKRTSEYPRPKEIRSRSMKELEYFKD  396 (398)
T ss_dssp             ------EE---ETTEESSCCCCHHHHHHHHHHHGGGGC-
T ss_pred             ------he---eCCEEcCCCCCHHHHHHHHHHHHHhCcC
Confidence                  22   3356667889999999999999999985

>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*

Probab=99.07  E-value=6.3e-11  Score=105.74  Aligned_cols=84  Identities=13%  Similarity=0.111  Sum_probs=60.2

Q ss_pred             CCCCccce--e--EEEEeCC--CCceeecC-CCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCCC--CCceEEecC
Q psy15543         12 GTSNVLAG--K--MYNIFSS--LSKKKKKK-KKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEV--GSRVLCRHP   82 (163)
Q Consensus        12 ~~~paL~g--K--LVei~~~--~PkmKlS~-~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~~--~~~l~~~~p   82 (163)
                      .+.|+|++  |  +|+++ |  +|++|+|. |.+|.|+||+|+|||.  .+    +|++++.+|..+..  +++++.  |
T Consensus       390 ~~~~~l~~v~K~~~v~~~-G~~~pv~K~s~td~~K~S~pG~k~v~r~--~~----g~~~~~~~~~~~~~~~~~~lL~--~  460 (484)
T 3dhf_A          390 LTRDLLNCSFKCSYVVTN-GLGINVFKDPVADPNKRSKKGRLSLHRT--PA----GNFVTLEEGKGDLEEYGQDLLH--T  460 (484)
T ss_dssp             CCTTTTTEEEEEEEEEET-TEEEECCCCCTTCGGGCCCCSSCEEEEC--TT----SCEEEECTTGGGGCSSCCCSCE--E
T ss_pred             CCCCCCCEEEEEEEEEEC-CccceeeecCCCCCCccCCCcceEEEEe--CC----CcEEEecCCCCCccccccccch--h
Confidence            35699999  9  66666 6  89999994 6899999999999995  34    38888887643221  133433  2


Q ss_pred             CCCcceeEecCCceeeCCCCCCCHHHHHHHHHH
Q psy15543         83 FIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKA  115 (163)
Q Consensus        83 ~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~  115 (163)
                             ++   +.++++ ..++|++||+|++.
T Consensus       461 -------v~---~~G~~~-~~~~l~eiR~~~~~  482 (484)
T 3dhf_A          461 -------VF---KNGKVT-KSYSFDEIRKNAQL  482 (484)
T ss_dssp             -------EE---ETTEEC-CCCCHHHHHHHTCC
T ss_pred             -------he---ECCEEc-CCCCHHHHHHHHhh
Confidence                   33   334565 66899999999753

>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2

Probab=98.27  E-value=2.3e-08  Score=88.41  Aligned_cols=40  Identities=10%  Similarity=-0.019  Sum_probs=36.8

Q ss_pred             CCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecC
Q psy15543         13 TSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGG   54 (163)
Q Consensus        13 ~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~   54 (163)
                      +.|+|++  |||+++ |+|++|+|++++|.| ||+|+|||++..
T Consensus       387 ~~~~l~~V~Klv~~n-G~pv~K~S~~~~K~t-~g~k~v~r~~~~  428 (449)
T 1ybe_A          387 SLKPISIVCKVSDAN-GRPAVKLSDNPQKAT-GDPAEVERYLKF  428 (449)
T ss_dssp             -CCCCCEEEEEEEET-TEECCBCCSSGGGCB-SCHHHHHHHHHH
T ss_pred             CCCccceEEEEeeec-CcceeecCCCCCCCC-CCHHHHHHHHhh
Confidence            4699999  999998 999999999999999 999999998864

>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}

Probab=98.20  E-value=2e-07  Score=81.14  Aligned_cols=40  Identities=10%  Similarity=-0.068  Sum_probs=36.4

Q ss_pred             CCccce--eEEEEe-----CCCCceeecCCCCCCCCCCcceEEEeecC
Q psy15543         14 SNVLAG--KMYNIF-----SSLSKKKKKKKKKKKPPPGRKDCYRLYGG   54 (163)
Q Consensus        14 ~paL~g--KLVei~-----~~~PkmKlS~~~~K~T~PG~KqVyR~yd~   54 (163)
                      .|+|++  |||+++     +|+|++|+|++++|.|.| .|+|||+.+.
T Consensus       342 ~~~l~~V~Klv~~~~~~~~~g~p~~KlS~~~~K~t~p-~k~v~r~~~~  388 (394)
T 2im5_A          342 VEPLNIVMKLWKCKMTAKDDWHYCVKLSDVDGKHTGE-PEEILLAMNT  388 (394)
T ss_dssp             CCCCCEEEEEEEEESSTTSCCEECCBCCSSTTCCBSC-HHHHHHHHHH
T ss_pred             CCccceEeeeeeecccccCCCCceEEecCCCCCccCC-HHHHHHHHHh
Confidence            799999  999995     289999999999999999 9999998653

>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2

Probab=98.10  E-value=3.7e-07  Score=79.80  Aligned_cols=39  Identities=13%  Similarity=-0.024  Sum_probs=31.5

Q ss_pred             CCCccce--eEEEEeCCCCceeecCCCCCCC--CCCcceEEEee
Q psy15543         13 TSNVLAG--KMYNIFSSLSKKKKKKKKKKKP--PPGRKDCYRLY   52 (163)
Q Consensus        13 ~~paL~g--KLVei~~~~PkmKlS~~~~K~T--~PG~KqVyR~y   52 (163)
                      ..|+|++  |||+++ |+|++|+|++++|.|  .||.|++||.+
T Consensus       354 ~~~~l~~V~Klv~~n-G~pv~K~S~~~~K~t~~~pg~~~~~r~~  396 (408)
T 1yir_A          354 GVEPMNIVVKMSACN-GHPVAKISDTPGKAQCRDPDFIHYLKHV  396 (408)
T ss_dssp             TCCCCCEEEEEEEET-TEECCCCCSCC-------CHHHHHHHHH
T ss_pred             CCCccceEEEEEEEC-CeeeEecCCCCCCcCCCCccceeeEeee
Confidence            3699999  999998 999999999999999  99999999965

>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2

Probab=97.46  E-value=7e-06  Score=72.43  Aligned_cols=37  Identities=16%  Similarity=0.038  Sum_probs=32.8

Q ss_pred             CCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEe
Q psy15543         13 TSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRL   51 (163)
Q Consensus        13 ~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~   51 (163)
                      +.|+|++  |||+++ |+|++|+|++++|.|.| .+.|.|+
T Consensus       382 ~~~~l~~V~Klv~~n-G~p~~KlS~~~~K~t~~-~~~~~~~  420 (441)
T 1vlp_A          382 KSEPLNIVIKLLEVN-GNHAIKISDNLGKNMGD-PATVKRV  420 (441)
T ss_dssp             EECCCCEEEEEEEET-TEECCBCCSSTTCCBSC-HHHHHHH
T ss_pred             CCCCcceEEEEEEEC-CeeeEEecCCCCCccCC-HHHHHHH
Confidence            3689999  999998 99999999999999999 6666664

>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}

Probab=96.92  E-value=0.00033  Score=61.22  Aligned_cols=36  Identities=19%  Similarity=0.056  Sum_probs=30.4

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCC--CCCcceEEE
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKP--PPGRKDCYR   50 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T--~PG~KqVyR   50 (163)
                      .|+|++  |||+++ |+|++|+|++++|.|  .|+..+..|
T Consensus       350 ~~~l~~V~Klv~~~-G~P~~KlSd~~~K~~~~~~~~~~~~~  389 (407)
T 3os4_A          350 VKPLNIVIKLVECN-DKPVAKLSDSPGKTICQDPAFVDQLR  389 (407)
T ss_dssp             CCCCCEEEEEEEET-TEECCCCCSSTTCCCCCCHHHHHHHH
T ss_pred             CCCcceEEEEEEEC-CcceeEecCCCccccCCCHHHHHHHH
Confidence            689999  999998 999999999999997  566554444

>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}

Probab=96.88  E-value=0.00012  Score=64.71  Aligned_cols=29  Identities=14%  Similarity=-0.051  Sum_probs=26.7

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCC
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPP   43 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~P   43 (163)
                      +|+|++  |||+++ |+|++|+|++++|.|.+
T Consensus       368 ~~~l~~VyKLve~~-G~P~~KlSd~~gK~t~~  398 (446)
T 4hl7_A          368 YRPLSIVIKLAECQ-GRPVAKISDQPEKAMCE  398 (446)
T ss_dssp             CCCCEEEEEEEEET-TEECCBCCSSGGGCBCS
T ss_pred             CCCceeEEEEEEEC-CcceeEecCCcccccCC
Confidence            589999  999998 99999999999999943

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	163
d2f7fa1	345	c.1.17.1 (A:141-485) Putative nicotinate phosphori	2e-28
d1ytda1	270	c.1.17.1 (A:120-389) Nicotinate phosphoribosyltran	3e-09
d2i14a1	279	c.1.17.1 (A:111-389) Nicotinate-nucleotide pyropho	2e-08
d1vlpa2	266	c.1.17.2 (A:150-415) Nicotinate phosphoribosyltran	0.002

>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Length = 345

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Putative nicotinate phosphoribosyltransferase EF2626
species: Enterococcus faecalis [TaxId: 1351]

 Score =  105 bits (262), Expect = 2e-28
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 30  KKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRA 89
             K     +K   PG+K  +R+                   P     +   HP       
Sbjct: 207 TIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQEEEIYMFHPVHTFINK 266

Query: 90  YVIPTRVEPLHRPI----------PDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHV 139
           YV      P+ + I          P L++++   K +L +L +++KR+LNP  Y     V
Sbjct: 267 YVRDFEARPVLQDIFVEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYP----V 322

Query: 140 AVSDHLYSFIHEL 152
            +S   ++    L
Sbjct: 323 DLSTDCWNHKMNL 335

>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Length = 270

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Nicotinate phosphoribosyltransferase Ta1145
species: Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.3 bits (125), Expect = 3e-09
 Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 11/108 (10%)

Query: 14  SNVLAGKMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEV 73
           +++ + K ++    + +   K + K+    GRK+  R        ++    +        
Sbjct: 174 TSISSAKPFDFAMDIVEVNGKPETKRGKMSGRKNVLRCTSCHRIEVVPANVQEKTCICGG 233

Query: 74  GSRVLCRHPFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLR 121
             + L        KR               P  +++RSR    L   +
Sbjct: 234 SMQNLLVKYLSHGKRTS-----------EYPRPKEIRSRSMKELEYFK 270

>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Length = 279

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Nicotinate-nucleotide pyrophosphorylase PF1904
species: Pyrococcus furiosus [TaxId: 2261]

 Score = 49.6 bits (118), Expect = 2e-08
 Identities = 13/90 (14%), Positives = 22/90 (24%), Gaps = 11/90 (12%)

Query: 34  KKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPEVGSRVLCRHPFIESKRAYVIP 93
           K   K+    GRK  YR   G  H +    +             L +      +      
Sbjct: 200 KPIAKRGKLSGRKQVYRCENGHYHVVPANKKLERCPVCNAKVEPLLKPIIENGEIVV--- 256

Query: 94  TRVEPLHRPIPDLEQVRSRVKASLRTLRQD 123
                     P   ++R  V    +    +
Sbjct: 257 --------EFPKAREIREYVLEQAKKFNLE 278

>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 8  SGFDGTSNVLAGKMYNI 24
          S   GTSN+L  K Y +
Sbjct: 59 SLLLGTSNILFAKKYGV 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	163
d2f7fa1	345	Putative nicotinate phosphoribosyltransferase EF26	99.98
d2i14a1	279	Nicotinate-nucleotide pyrophosphorylase PF1904 {Py	99.61
d1ytda1	270	Nicotinate phosphoribosyltransferase Ta1145 {Therm	99.5
d1yira1	255	Nicotinate phosphoribosyltransferase, C-terminal d	98.42
d1vlpa2	266	Nicotinate phosphoribosyltransferase, C-terminal d	98.3
d1ybea1	266	Nicotinate phosphoribosyltransferase, C-terminal d	97.99

>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Putative nicotinate phosphoribosyltransferase EF2626
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.98  E-value=2.5e-32  Score=232.89  Aligned_cols=138  Identities=22%  Similarity=0.351  Sum_probs=126.4

Q ss_pred             CCCccce--eEEEEe----CCCCceeecCCCCCCCCCCcceEEEeecC-CCCeeeeEeecCCCCCCCCCCceEEecCCCC
Q psy15543         13 TSNVLAG--KMYNIF----SSLSKKKKKKKKKKKPPPGRKDCYRLYGG-DGHALIDLLQRSTEAAPEVGSRVLCRHPFIE   85 (163)
Q Consensus        13 ~~paL~g--KLVei~----~~~PkmKlS~~~~K~T~PG~KqVyR~yd~-~G~~~~DvI~l~~E~~~~~~~~l~~~~p~~~   85 (163)
                      ..|+|++  |||+++    .|+|++|+|++.+|.|+||+|||||+|+. +|.+.+|+|++.+|.++. ++++.++||.++
T Consensus       184 ~~p~l~~v~Klv~i~g~~g~~~p~~K~s~~~~K~t~pG~K~v~R~~~~~~~~~~~D~i~l~~e~~~~-~~~~~~~~p~~~  262 (345)
T d2f7fa1         184 DQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQ-EEEIYMFHPVHT  262 (345)
T ss_dssp             TSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCGGG-CSEEEEECSSST
T ss_pred             CCCcccchhcceeecCCCCceeeeeeecCCCCCcCCCCCeeEEEEecCCCCeeEeEEEeecCCCCCc-CcceeeecCccc
Confidence            4589999  999997    24699999999999999999999999985 689999999999997665 788999999999


Q ss_pred             cceeEecCCceeeCCC----------CCCCHHHHHHHHHHHHhhccHhhhhccCCCccccCCcchhhHHHHHHHHHHHhh
Q psy15543         86 SKRAYVIPTRVEPLHR----------PIPDLEQVRSRVKASLRTLRQDHKRNLNPTPYKVPIHVAVSDHLYSFIHELWLQ  155 (163)
Q Consensus        86 ~~~~~i~~~~~e~Ll~----------~~psL~~iR~~~~~~L~~Lp~~~~rl~nP~~Y~V~~~~~lS~~L~~l~~~L~~~  155 (163)
                      ++++.+.+++.++||+          +.|||++||+|++++|++||++++||.|||+|+|    ++|++|++++++|+.+
T Consensus       263 ~~~~~~~~~~~~~LL~~v~~~Gk~v~~~~sl~eiR~r~~~~l~~l~~~~~rl~nP~~Y~V----~ls~~L~~~~~~l~~~  338 (345)
T d2f7fa1         263 FINKYVRDFEARPVLQDIFVEGKRVYELPTLDEIKQYAKENLDSLHEEYKRDLNPQKYPV----DLSTDCWNHKMNLLEK  338 (345)
T ss_dssp             TSEEEEESEEEEECCEEEEETTEECCCCCCHHHHHHHHHHHHHHSCHHHHCSSSCCCCCE----EECHHHHHHHHHHHHH
T ss_pred             hhheeccCcchhhhhhHHhcCCEEeCCCCCHHHHHHHHHHHHHhCCHHHhcccCCcCCee----ccCHHHHHHHHHHHHH
Confidence            9999998888877766          6789999999999999999999999999999999    9999999999999865

>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Nicotinate-nucleotide pyrophosphorylase PF1904
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.61  E-value=4.9e-17  Score=133.77  Aligned_cols=100  Identities=15%  Similarity=0.159  Sum_probs=78.3

Q ss_pred             ccCCCCCCCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCCC-CCCceEEecC
Q psy15543          6 GTSGFDGTSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAPE-VGSRVLCRHP   82 (163)
Q Consensus         6 ~~~~~~~~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~~-~~~~l~~~~p   82 (163)
                      |..+.-+|+|.+++  |||+++ |+|++|.|      ++||+|||||+|+.++.+..|...++++.... ..++|+.  |
T Consensus       177 GvGt~l~t~~~l~~~~klve~~-g~p~~K~~------~~pG~K~v~R~~~~~~~~~~~~~~~~~~~~~~~~~~~LL~--~  247 (279)
T d2i14a1         177 GVGGAIASAKPVDFALDIVEVE-GKPIAKRG------KLSGRKQVYRCENGHYHVVPANKKLERCPVCNAKVEPLLK--P  247 (279)
T ss_dssp             EECHHHHTCCCCCCEEEEEEET-TEECCCTT------SCCSCEEEEEETTSCEEEEETTSCCCBCSSSCCBEEECCE--E
T ss_pred             ccccccccCCCcceeeeEeeEC-CeEecccc------CCCCCceEEEEeCCCceEecCcccccccCCCCCccccCcc--h
Confidence            44445578899999  999998 99999987      48999999999998888888888777664321 1234443  2


Q ss_pred             CCCcceeEecCCceeeCCCCCCCHHHHHHHHHHHHhhccHhh
Q psy15543         83 FIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTLRQDH  124 (163)
Q Consensus        83 ~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~L~~Lp~~~  124 (163)
                             +   ++.++++.+.|||++||+|+++||++||+++
T Consensus       248 -------v---~~~G~~~~~~~sl~eiR~~~~~~l~~l~~~~  279 (279)
T d2i14a1         248 -------I---IENGEIVVEFPKAREIREYVLEQAKKFNLEI  279 (279)
T ss_dssp             -------E---EBTTBCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             -------H---HhCCEEeCCCCCHHHHHHHHHHHHHhCCccC
Confidence                   2   3446778889999999999999999999863

>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Nicotinate phosphoribosyltransferase Ta1145
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=99.50  E-value=1.7e-15  Score=124.17  Aligned_cols=97  Identities=13%  Similarity=0.136  Sum_probs=69.4

Q ss_pred             CccCCCCCCCCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEeecCCCCeeeeEeecCCCCCC-CCCCceEEec
Q psy15543          5 LGTSGFDGTSNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLYGGDGHALIDLLQRSTEAAP-EVGSRVLCRH   81 (163)
Q Consensus         5 ~~~~~~~~~~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~yd~~G~~~~DvI~l~~E~~~-~~~~~l~~~~   81 (163)
                      +|..++-+|.|.+++  |||+++ |+|++|.|      ++||+|||||+|+.++..+.++...+.+... ...++|+.  
T Consensus       170 fGvGt~Lvt~~~l~~v~Klvei~-G~p~~K~~------~~pG~K~v~R~~~~~~~~~~~~~~~~~~~~~~~~~~~LL~--  240 (270)
T d1ytda1         170 FGVGTSISSAKPFDFAMDIVEVN-GKPETKRG------KMSGRKNVLRCTSCHRIEVVPANVQEKTCICGGSMQNLLV--  240 (270)
T ss_dssp             EEECHHHHTCCCCCEEEEEEEET-TEECCCTT------SCCSCEEEEEETTTCCEEEEETTCCCEECSSSSEEEECCE--
T ss_pred             EeeccccccCCCCCeEEEeeecC-Ceeccccc------CCCCcceEEEEecCCceEEecccccccccCCCCccccccc--
Confidence            355556688999999  999998 99999954      5899999999998666555555444333211 11123322  


Q ss_pred             CCCCcceeEecCCceeeCCCCCCCHHHHHHHHHHHHhhc
Q psy15543         82 PFIESKRAYVIPTRVEPLHRPIPDLEQVRSRVKASLRTL  120 (163)
Q Consensus        82 p~~~~~~~~i~~~~~e~Ll~~~psL~~iR~~~~~~L~~L  120 (163)
                      |       +   ++.++++.+.|+|++||+|+++||++|
T Consensus       241 ~-------v---~~~Gk~v~~~~sl~eiR~~~~~~L~~l  269 (270)
T d1ytda1         241 K-------Y---LSHGKRTSEYPRPKEIRSRSMKELEYF  269 (270)
T ss_dssp             E-------E---EETTEESSCCCCHHHHHHHHHHHHGGG
T ss_pred             h-------H---HhCCEEcCCCCCHHHHHHHHHHHHHhc
Confidence            1       2   334577778899999999999999987

>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.42  E-value=1.2e-08  Score=82.34  Aligned_cols=36  Identities=11%  Similarity=-0.156  Sum_probs=25.0

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEE
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYR   50 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR   50 (163)
                      +|+||+  ||||++ |+|+||+|++++|.|.||.|+++|
T Consensus       211 ~p~l~~VyKLve~~-g~P~~KlS~~pgK~t~p~~~~~~~  248 (255)
T d1yira1         211 VEPMNIVVKMSACN-GHPVAKISDTPGKAQCRDPDFIHY  248 (255)
T ss_dssp             CCCCCEEEEEEEET-TEECCCCCSCC-------CHHHHH
T ss_pred             CCCccEEEEEEEEC-CEeeeeecCCCccccCCcHHHHHH
Confidence            489999  999998 999999999999999999755443

>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.30  E-value=3.9e-08  Score=79.68  Aligned_cols=37  Identities=16%  Similarity=0.018  Sum_probs=33.3

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEee
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLY   52 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~y   52 (163)
                      .|+|++  ||||++ |+|+||+|++++|.|.| .|+|+|+-
T Consensus       222 ~p~l~~VyKLve~~-G~P~~KlSd~~~K~T~~-~~~v~r~k  260 (266)
T d1vlpa2         222 SEPLNIVIKLLEVN-GNHAIKISDNLGKNMGD-PATVKRVK  260 (266)
T ss_dssp             ECCCCEEEEEEEET-TEECCBCCSSTTCCBSC-HHHHHHHH
T ss_pred             CCcccEEEEEEEEC-CeeeeEecCCCCcccCC-HHHHHHHH
Confidence            489999  999998 99999999999999987 88888853

>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.99  E-value=3e-07  Score=74.39  Aligned_cols=36  Identities=11%  Similarity=-0.007  Sum_probs=30.2

Q ss_pred             CCccce--eEEEEeCCCCceeecCCCCCCCCCCcceEEEee
Q psy15543         14 SNVLAG--KMYNIFSSLSKKKKKKKKKKKPPPGRKDCYRLY   52 (163)
Q Consensus        14 ~paL~g--KLVei~~~~PkmKlS~~~~K~T~PG~KqVyR~y   52 (163)
                      .|+|++  |||+++ |+|+||+|++++|.|.|  |++||.|
T Consensus       221 ~p~l~~VyKLve~~-g~P~~KlSd~~~K~tg~--~~~~~~~  258 (266)
T d1ybea1         221 LKPISIVCKVSDAN-GRPAVKLSDNPQKATGD--PAEVERY  258 (266)
T ss_dssp             CCCCCEEEEEEEET-TEECCBCCSSGGGCBSC--HHHHHHH
T ss_pred             CCCcceEEEeeeeC-CeeeeEecCCCccccCC--HHHHHHH
Confidence            499999  999998 99999999999999966  4444433