Psyllid ID: psy15555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------49
Protein Sequence
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKSS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHcccccEEEEcccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHccccccEEEEEccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHccccccEEEccccccHHHHcccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHccEEEEccccccccHHHHHHHHccccEEEEcccccccEEEcccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHcccEcccccEEEEEEcccEEEccccccHHHHHHHHHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHccccEEEEEEcccEcHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHccccccEEEcccccHHHHHcccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccHHcccccEEEEEEccccHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHccEEEEEccccHHccHHHHHHHHcccEEEEEccccccccEEEEcccccccEEEcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFhpycnaggggeRVLWTAVLALHqkypdykiyiytgdvdaspsEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEAllsfqpdiyidtmgyaftyplfsyiggskvacyihYPTITKEMLTRVARRVIThnnsqrvannpiltsFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCqlktyklyppcdtedlkkithsktdgpvKIISvaqfrpekdhpLQLRAMYQLRQIISEELWDNLKLIFigstrneedEVCVKDMQDLCKHlslennvefkvnlpyedmKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAhksggpkmdiviedpetcrngflacdeVEYAQTIKLILHLSQDtktrisqnavssvdrfsmeefkngfltfTQPLFKVMKKSS
Flexible Loop (DISEMBL)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVIthnnsqrvannpiltSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKkithsktdgpVKIISVaqfrpekdhpLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHlslennvefkvnLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHlsqdtktrisQNAVSSVDRFSMEEfkngfltftqplfkvmkkss
Low Complexity Region (SEG)
MFCCLWKSVVMWlvflfysilallllsiivlplsvllfKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKSS
Disordered region (IsUnstruct)
*FCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK******
Disordered Region (DISOPRED)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKY*************TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKK*****TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL*KVM****
Disordered Region (DISEMBL)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKSS
Disordered Region (DISPRO)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM****
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	488	2.2.26 [Sep-21-2011]
Q08B22	486	GDP-Man:Man(3)GlcNAc(2)-P	N/A	N/A	0.938	0.942	0.506	1e-129
Q7ZW24	500	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.967	0.944	0.464	1e-125
Q5R7Z6	492	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.959	0.951	0.481	1e-124
Q2TAA5	492	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.959	0.951	0.479	1e-124
Q6P312	487	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.944	0.946	0.492	1e-123
Q3TZM9	492	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.967	0.959	0.462	1e-123
Q54DM9	505	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.862	0.833	0.438	1e-103
Q9XEE9	463	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.928	0.978	0.429	1e-101
P53993	470	Uncharacterized glycosylt	yes	N/A	0.911	0.946	0.403	1e-95
O74878	471	GDP-Man:Man(3)GlcNAc(2)-P	yes	N/A	0.819	0.849	0.421	3e-87

>sp|Q08B22|ALG11_XENLA GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus laevis GN=alg11 PE=2 SV=2

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/472 (50%), Positives = 312/472 (66%), Gaps = 14/472 (2%)

Query: 21  LALLLLSIIVLPLSVLLF---KYYVSKKRK-----SYNVLKTVAFFHPYCNAGGGGERVL 72
           + +L+ S+ +  + VLLF   + +V +K+K          K VAFFHPYCNAGGGGERVL
Sbjct: 19  IPVLITSVGLCLIFVLLFICTRLWVQRKKKVEIGKDGKKKKVVAFFHPYCNAGGGGERVL 78

Query: 73  WTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA 132
           W A+ +L ++Y D    IYTGD DAS  +I+  A  RFNI L   V  F++L +R  VEA
Sbjct: 79  WCALRSLQKRYKDAIYVIYTGDKDASEEQILNGAAARFNIKLSHPV-RFIFLEKRGLVEA 137

Query: 133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPT 192
           S YP FTLLGQS+GS++LG EAL    PDIYID+MGYAFT PLF Y+GG  V CY+HYPT
Sbjct: 138 SCYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYLGGCHVGCYVHYPT 197

Query: 193 ITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWT 252
           I+ +ML+ V  +    NN+  ++NNP+L+  KL YY +FAL Y  VG  SD+IMVNS+WT
Sbjct: 198 ISMDMLSVVRSQHARFNNAAFISNNPVLSRLKLIYYYLFALFYGWVGSCSDVIMVNSTWT 257

Query: 253 EEHVIQLWNCQLKTYKLYPPCDTEDLKK--ITHSKTDGPVKIISVAQFRPEKDHPLQLRA 310
             H++ LW C  +T  +YPPCD +   +  I   K +    ++S+ QFRPEKDHPLQ+RA
Sbjct: 258 FSHILDLWKCSDRTSIVYPPCDVQTFLEIDINQHKENEEHSVVSIGQFRPEKDHPLQIRA 317

Query: 311 MYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM 370
              L +  + E    LKLI IG  RN+EDE+ V +++ L   L +   VEFKVN+P+E++
Sbjct: 318 FAALLEKKTAEQRAKLKLILIGGCRNDEDELRVSELKKLSSELGIP--VEFKVNVPFEEL 375

Query: 371 KKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC 430
           KK  SE  IGLH MWNEHFGIGIVECMAAG I++AH SGGPK+DIV+   E  + GFLA 
Sbjct: 376 KKHLSEATIGLHTMWNEHFGIGIVECMAAGTIILAHNSGGPKLDIVVPHEEQ-QTGFLAD 434

Query: 431 DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK 482
               YA  +  IL L+ + +  I QNA  SV RFS +EF+  FL  ++PLFK
Sbjct: 435 SVDSYAAAMDHILSLTPEQRLSIRQNARLSVGRFSDQEFEANFLASSEPLFK 486

Xenopus laevis (taxid: 8355)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3EC: 1

>sp|Q7ZW24|ALG11_DANRE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Danio rerio GN=alg11 PE=2 SV=2

 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/487 (46%), Positives = 319/487 (65%), Gaps = 15/487 (3%)

Query: 10  VMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLK---TVAFFHPYCNAGG 66
           ++W + L    L+ LL +I+ L   ++  + ++  KRK+  V      VAFFHPYCNAGG
Sbjct: 17  LLWSLMLPCFYLSFLLTTILFL--FIMGVRSWLQMKRKTRRVQDGRPAVAFFHPYCNAGG 74

Query: 67  GGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYR 126
           GGERVLW A+ AL  +Y D    +YTGD   +  EI+  A +RFNI LP + + FV+L  
Sbjct: 75  GGERVLWCALRALQNRYQDVSFVVYTGDQGVTAEEILDGARRRFNIRLP-RPVKFVFLKH 133

Query: 127 RKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVAC 186
           R  VEA LYP+FTLLGQS+GS+ LG EAL  F PD+YID+MG+AFT P+F Y+GG +V  
Sbjct: 134 RLLVEAKLYPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVGS 193

Query: 187 YIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIM 246
           Y+HYPTI+ +ML+ V  R    NN+  +++NP+L++ K+ YY VFALLY   G  SD+IM
Sbjct: 194 YVHYPTISTDMLSVVRERNPRFNNADYISSNPVLSAIKVIYYCVFALLYGLAGSCSDVIM 253

Query: 247 VNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVK------IISVAQFRP 300
           VNS+WT  H++ LW    +T  +YPPCD +    +   + +   +      ++SV QFRP
Sbjct: 254 VNSTWTLGHILALWRTPNRTSVVYPPCDVQAFLDVPIGEDNEEKEQKKCHSLVSVGQFRP 313

Query: 301 EKDHPLQLRAMYQL--RQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENN 358
           EKDH LQ+RA  +L  R+       + +KL+ IG  RN+EDE  V  ++ LC+ L + + 
Sbjct: 314 EKDHQLQIRAFKKLLDRKEAEPAGREAVKLVLIGGCRNQEDEDRVLMLRGLCQELGIADR 373

Query: 359 VEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIE 418
           VEFK+N+P++++KK+ ++  IGLH MWNEHFGIGIVECMAAG I++AHKSGGPK+DIV+ 
Sbjct: 374 VEFKLNIPFQELKKDLTDATIGLHTMWNEHFGIGIVECMAAGTIILAHKSGGPKLDIVVP 433

Query: 419 DPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ 478
             +    GFLA DE  YA  ++ IL +S  T+  + + A  SV RFS +EF+  FL+  +
Sbjct: 434 Y-DGGPTGFLADDEDNYADAMERILSMSPATRLEMRRRARLSVSRFSDQEFEGSFLSAME 492

Query: 479 PLFKVMK 485
           PL   ++
Sbjct: 493 PLMSTLR 499

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q5R7Z6|ALG11_PONAB GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Pongo abelii GN=ALG11 PE=2 SV=2

 Score =  447 bits (1149), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/482 (48%), Positives = 321/482 (66%), Gaps = 14/482 (2%)

Query: 13  LVFLFYSIL--ALLLLSIIVLPLSVLLF--KYYVSKKRKSYNVLKT------VAFFHPYC 62
           L+  FYS+    L++   + + L ++L+  +  + +K+K  +  K       +AFFHPYC
Sbjct: 13  LLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLLLQRKKKLVSTSKNGKNQMVIAFFHPYC 72

Query: 63  NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFV 122
           NAGGGGERVLW A+ AL +KYP+    +YTGDV+ +  +I++ A +RFNI L   V  FV
Sbjct: 73  NAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPV-QFV 131

Query: 123 YLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGS 182
           +L +R  VE SLYP+FTLLGQS+GS+ LG EAL+   PD+YID+MGYAFT PLF YIGG 
Sbjct: 132 FLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGC 191

Query: 183 KVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYS 242
           +V  Y+HYPTI+ +ML+ V  + I  NN+  +  NP L+  KL YY +FA +Y  VG  S
Sbjct: 192 QVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCS 251

Query: 243 DIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-HSKTDGPVK-IISVAQFRP 300
           D++MVNSSWT  H++ LW     T  +YPPCD +    I  H K   P   ++SV QFRP
Sbjct: 252 DVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRP 311

Query: 301 EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE 360
           EK+HPLQ+RA  +L      E   +LKL+FIG  RN++DE+ V  ++ L + L ++  VE
Sbjct: 312 EKNHPLQIRAFAKLLNKKMVESPPSLKLVFIGGCRNKDDELRVNQLRRLSEDLGVQEYVE 371

Query: 361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP 420
           FK+N+P++++K   SE  IGLH MWNEHFGIG+VECMAAG I++AH SGGPK+DIV+   
Sbjct: 372 FKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPH- 430

Query: 421 ETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL 480
           E    GFLA  E +YA+TI  IL +S + + +I ++A +SV RFS +EF+  FL+  + L
Sbjct: 431 EGDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEKL 490

Query: 481 FK 482
           FK
Sbjct: 491 FK 492

Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q2TAA5|ALG11_HUMAN GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Homo sapiens GN=ALG11 PE=1 SV=2

 Score =  445 bits (1144), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/482 (47%), Positives = 320/482 (66%), Gaps = 14/482 (2%)

Query: 13  LVFLFYSIL--ALLLLSIIVLPLSVLLF--KYYVSKKRKSYNVLKT------VAFFHPYC 62
           L+  FYS+    L++   + + L ++L+  +  + +K+K  +  K       +AFFHPYC
Sbjct: 13  LLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLLLQRKKKLVSTSKNGKNQMVIAFFHPYC 72

Query: 63  NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFV 122
           NAGGGGERVLW A+ AL +KYP+    +YTGDV+ +  +I++ A +RFNI L   V  FV
Sbjct: 73  NAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVNGQQILEGAFRRFNIRLIHPV-QFV 131

Query: 123 YLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGS 182
           +L +R  VE SLYP+FTLLGQS+GS+ LG EAL+   PD+YID+MGYAFT PLF YIGG 
Sbjct: 132 FLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGC 191

Query: 183 KVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYS 242
           +V  Y+HYPTI+ +ML+ V  + I  NN+  +  NP L+  KL YY +FA +Y  VG  S
Sbjct: 192 QVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNPFLSKVKLIYYYLFAFIYGLVGSCS 251

Query: 243 DIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-HSKTDGPVK-IISVAQFRP 300
           D++MVNSSWT  H++ LW     T  +YPPCD +    I  H K   P   ++SV QFRP
Sbjct: 252 DVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIPLHEKKMTPGHLLVSVGQFRP 311

Query: 301 EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE 360
           EK+HPLQ+RA  +L      E   +LKL+ IG  RN++DE+ V  ++ L + L ++  VE
Sbjct: 312 EKNHPLQIRAFAKLLNKKMVESPPSLKLVLIGGCRNKDDELRVNQLRRLSEDLGVQEYVE 371

Query: 361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP 420
           FK+N+P++++K   SE  IGLH MWNEHFGIG+VECMAAG I++AH SGGPK+DIV+   
Sbjct: 372 FKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTIILAHNSGGPKLDIVVPH- 430

Query: 421 ETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL 480
           E    GFLA  E +YA+TI  IL +S + + +I ++A +SV RFS +EF+  FL+  + L
Sbjct: 431 EGDITGFLAESEEDYAETIAHILSMSAEKRLQIRKSARASVSRFSDQEFEVTFLSSVEKL 490

Query: 481 FK 482
           FK
Sbjct: 491 FK 492

Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q6P312|ALG11_XENTR GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Xenopus tropicalis GN=alg11 PE=2 SV=1

 Score =  441 bits (1135), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/481 (49%), Positives = 309/481 (64%), Gaps = 20/481 (4%)

Query: 13  LVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVL-------KTVAFFHPYCNAG 65
           L  LF  +L   +   +VL L  +  + ++ +K+K    +       + VAFFHPYCNAG
Sbjct: 14  LTALFIPVLIASIGLCLVLVLLFICTRLWIQRKKKQSVEIGKDGKKKRVVAFFHPYCNAG 73

Query: 66  GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLY 125
           GGGERVLW A+ +L ++Y D    IYTGD D S  +I+  A  RFNI L   V  F++L 
Sbjct: 74  GGGERVLWCALRSLQKRYKDAIYVIYTGDKDVSEEQILNGAAARFNIKLSHPV-KFIFLE 132

Query: 126 RRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVA 185
           +R  VEAS YP FTLLGQS+GS++LG EAL    PDIYID+MGYAFT PLF Y+GG +V 
Sbjct: 133 KRGLVEASFYPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYVGGCQVG 192

Query: 186 CYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDII 245
           CY+HYPTI+ +ML+ V  +    NN+  ++NNP+L+  KL YY +FA++Y  VG  SD+I
Sbjct: 193 CYVHYPTISMDMLSVVRSQNARFNNAAFISNNPVLSRLKLIYYYLFAVIYGWVGSCSDVI 252

Query: 246 MVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKI--THSKTDGPVKIISVAQFRPEKD 303
           MVNS+WT  H++ LW C  +T  +YPPCD +    I     K      I+S+ QFRPEKD
Sbjct: 253 MVNSTWTFAHILDLWKCSERTSIVYPPCDVQTFLDINLNQHKDIEEHSIVSIGQFRPEKD 312

Query: 304 HPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV 363
           HPLQ+ A +             LKLI IG  RN EDE+ V +++ L   L +   VEFKV
Sbjct: 313 HPLQICA-FAALLKKKTTEKLKLKLILIGGCRNNEDELRVSELKKLSSELGIP--VEFKV 369

Query: 364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI--EDPE 421
           N+P+ ++KK  SE  IGLH MWNEHFGIGIVECMAAG I++AH SGGPK+DIV+  E+ E
Sbjct: 370 NIPFAELKKHLSEATIGLHTMWNEHFGIGIVECMAAGTIILAHNSGGPKLDIVVPYEEHE 429

Query: 422 TCRNGFLACDEVE-YAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL 480
           T   GFLA D VE YA  +  IL L+ + +  I QNA  SV RFS +EF+  FL  ++PL
Sbjct: 430 T---GFLA-DSVESYAAAMDYILCLTPEQRLTIRQNARRSVARFSDQEFEANFLASSEPL 485

Query: 481 F 481
           F
Sbjct: 486 F 486

Xenopus tropicalis (taxid: 8364)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q3TZM9|ALG11_MOUSE GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Mus musculus GN=Alg11 PE=2 SV=1

 Score =  441 bits (1134), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/482 (46%), Positives = 317/482 (65%), Gaps = 10/482 (2%)

Query: 8   SVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKT------VAFFHPY 61
           +V+ +   LF+  L +  +  + L + + + ++++ +K+KS +  K       VAFFHPY
Sbjct: 12  AVLRFFYSLFFPGLMICGVLCVYLVIGLWVIRWHLQRKKKSVSTSKNGKEQTVVAFFHPY 71

Query: 62  CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINF 121
           CNAGGGGERVLW A+ AL +KYP+    +YTGD++ S  +I+  A +RFNI L   V  F
Sbjct: 72  CNAGGGGERVLWCALRALQKKYPEAVYVVYTGDINVSGQQILDGAFRRFNIKLAHPV-QF 130

Query: 122 VYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGG 181
           V+L +R  VE S YP+FTLLGQS+GS++LG EAL+   PD+YID+MGYAFT PLF Y+GG
Sbjct: 131 VFLRKRYLVEDSRYPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGG 190

Query: 182 SKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKY 241
            +V  Y+HYPTI+ +ML+ V  +    NN+  ++ N +L+  KL YY +FA +Y  VG  
Sbjct: 191 CRVGSYVHYPTISTDMLSVVKNQNPGFNNAAFISRNALLSKAKLIYYYLFAFVYGLVGSC 250

Query: 242 SDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-HSKTDGPVK-IISVAQFR 299
           SDI+MVNSSWT  H++ LW     T  +YPPCD +    I  H K   P   ++S+ QFR
Sbjct: 251 SDIVMVNSSWTLNHILSLWKVGHCTNIVYPPCDVQTFLDIPLHEKKVTPGHLLVSIGQFR 310

Query: 300 PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNV 359
           PEK+H LQ++A  +L    + EL  +LKL+ IG  RN++DE  V  ++ L ++L ++ NV
Sbjct: 311 PEKNHALQIKAFAKLLNEKAAELGHSLKLVLIGGCRNKDDEFRVNQLRSLSENLGVQENV 370

Query: 360 EFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIED 419
           EFK+N+ ++++K   SE  IGLH MWNEHFGIG+VECMAAG +++AH SGGPK+DIVI  
Sbjct: 371 EFKINISFDELKNYLSEATIGLHTMWNEHFGIGVVECMAAGTVILAHNSGGPKLDIVIPH 430

Query: 420 PETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP 479
            E    GFLA  E  YA ++  IL LS + + +I +NA +S+ RFS +EF+  FL   + 
Sbjct: 431 -EGQITGFLAESEEGYADSMAHILSLSAEERLQIRKNARASISRFSDQEFEVAFLCSMEK 489

Query: 480 LF 481
           L 
Sbjct: 490 LL 491

Mannosyltransferase involved in the last steps of the synthesis of Man5GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum. Catalyzes the addition of the 4th and 5th mannose residues to the dolichol-linked oligosaccharide chain.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q54DM9|ALG11_DICDI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/433 (43%), Positives = 275/433 (63%), Gaps = 12/433 (2%)

Query: 54  TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIV 113
           ++ FFHPYC AGGGGERVLW A+ ++ ++YP  +  +YTGD + S  EI  +  + F+I 
Sbjct: 63  SIGFFHPYCTAGGGGERVLWCAIKSIQEEYPYVRCVVYTGDKE-SDDEIFNKVKKTFDIE 121

Query: 114 LPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY 173
           L    + F+ L +RK+VEAS YP FTL+GQS+GSMILG EAL  F P I++D+MGYAFT+
Sbjct: 122 LGRDNLEFIRLKKRKWVEASTYPRFTLIGQSLGSMILGWEALTKFVPTIFLDSMGYAFTF 181

Query: 174 PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL 233
           P+FS IGGS VACY+HYPTI+ +M++ V     + NN   +++N   T  KL YY +F+ 
Sbjct: 182 PIFSLIGGSTVACYVHYPTISSDMISSVKSSSYSFNNDVSISSNKFKTISKLIYYNIFSK 241

Query: 234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL--KTYKLYPPCDTEDLKKITHSKTDGPVK 291
           +Y  VG +S ++MVN +WT  H+  +W  Q     + +YPP D +  K++     DG  K
Sbjct: 242 IYQIVGSFSKLVMVNGTWTGNHIRDIWKKQFGYDLFIVYPPVDVKGRKQLKLGWMDGTRK 301

Query: 292 --IISVAQFRPEKDHPLQLRAMYQLRQIIS--EELWDNLKLIFIGSTRNEEDEVCVKDMQ 347
             I+S+AQFRPEK+H LQLR +  L +      E   N KL+ +G  R++ D   V+ ++
Sbjct: 302 NMILSIAQFRPEKNHQLQLRTLAHLLEKYPSHREQPLNTKLVLVGGVRDQADRDRVEQLR 361

Query: 348 DLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHK 407
           +L K L++E++VEF++ +  + + +  SE  +G+H M+NEHFGIG+VE MAAG+I +A+ 
Sbjct: 362 NLSKELNIEDHVEFQIGISSDQLNQLLSEASVGIHTMYNEHFGIGVVELMAAGVIPVANN 421

Query: 408 SGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME 467
           S GPK DIV  +      GFLA    EYA+ I  IL   ++    + + A  S DRFS  
Sbjct: 422 SAGPKEDIVRHED----TGFLASTIQEYAEYIHEILAY-REKYVEMQKKARDSTDRFSES 476

Query: 468 EFKNGFLTFTQPL 480
            F N FL + +PL
Sbjct: 477 NFSNQFLKYIKPL 489

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|Q9XEE9|ALG11_ARATH GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG11 PE=1 SV=2

 Score =  370 bits (951), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/466 (42%), Positives = 284/466 (60%), Gaps = 13/466 (2%)

Query: 18  YSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVL 77
           Y IL  LL  I  + LS+ L      K RK     + V FFHPY N GGGGERVLW AV 
Sbjct: 4   YFILYTLLTIIFAVSLSLFLSVINARKSRK-----RAVGFFHPYTNDGGGGERVLWCAVK 58

Query: 78  ALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL--PDQVINFVYLYRRKFVEASLY 135
           A+ ++ PD    I+TGD D+S   + +RA  RF + L  P +VI   +L +RK++E S Y
Sbjct: 59  AIQEENPDLDCVIFTGDHDSSSDSLARRAVDRFGVHLQSPPKVI---HLNKRKWIEESTY 115

Query: 136 PYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITK 195
           P+FT++GQS+GS+ L  EAL  F P  ++DT GYAFTYPL + I G KV CY HYPTI+ 
Sbjct: 116 PHFTMIGQSLGSVYLAWEALRMFTPLYFLDTSGYAFTYPL-ARIFGCKVVCYTHYPTISL 174

Query: 196 EMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEH 255
           +M++RV +R   +NN   +A +  L++ KL YY+ F+ +Y  VG  + + MVNSSWT+ H
Sbjct: 175 DMISRVRQRNSMYNNDASIAKSNWLSTCKLVYYRAFSWMYGMVGSCTHLAMVNSSWTKSH 234

Query: 256 VIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLR 315
           +  LW    +  ++YPPCDT  L+     ++  P KIISVAQFRPEK H LQL A     
Sbjct: 235 IEVLWRIPERITRVYPPCDTSGLQAFPLERSSDPPKIISVAQFRPEKAHMLQLEAFSLAL 294

Query: 316 QIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS 375
           + +  ++    KL F+GS RN  DE  ++ ++D    L ++ +V+F  N  Y ++ +   
Sbjct: 295 EKLDADV-PRPKLQFVGSCRNNSDEERLQKLKDRAVELKVDGDVQFYKNAMYRELVELLG 353

Query: 376 EGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEY 435
             + GLH M +EHFGI +VE MAAG I IAH S GPKMDIV+E+ +  + GFLA    EY
Sbjct: 354 NAVAGLHGMIDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLEE-DGQKTGFLAETVEEY 412

Query: 436 AQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF 481
           A+ I  I+ +++  + +++++A     RFS + F   F T  +P+F
Sbjct: 413 AEAILEIVKMNETERLKMAESARKRAARFSEQRFCEDFKTAIRPIF 458

Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

>sp|P53993|YMP8_CAEEL Uncharacterized glycosyltransferase B0361.8 OS=Caenorhabditis elegans GN=B0361.8 PE=3 SV=3

 Score =  350 bits (899), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/459 (40%), Positives = 284/459 (61%), Gaps = 14/459 (3%)

Query: 18  YSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVL 77
           +SI  +  L  +++ L ++ F  Y   +RKS    KTVAFFHPYCNAGGGGERVLW A+ 
Sbjct: 11  HSITTVFYLVPLIIAL-IIPFSLYSGFRRKS----KTVAFFHPYCNAGGGGERVLWAAIR 65

Query: 78  ALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPY 137
            + +K+PD+K ++Y+GD DA+  +I+ +A QRF I L    I F+YL+ R  VEA  Y +
Sbjct: 66  TMQKKFPDHKYFVYSGDTDATKEQILLKARQRFGIELDPSNIQFIYLHWRTLVEARHYKH 125

Query: 138 FTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEM 197
            T+L Q++  +IL +EA     P ++ID+MGY  + P F  + GSKV  Y+HYPTI+ +M
Sbjct: 126 CTMLFQALAGLILALEAWFRMVPAVFIDSMGYPLSLPAFR-LSGSKVVAYVHYPTISCDM 184

Query: 198 LTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVI 257
           L  V  R  T NNS  +A + +L+  KL YY++FA LY   GK + + MVN SWT+ H+ 
Sbjct: 185 LDVVESRQETFNNSSTIAQSNVLSWGKLTYYRLFACLYWLAGKAAHVGMVNGSWTQRHIT 244

Query: 258 QLWNCQLKTYKLYPPCDTE---DLKKITHS--KTDGPVKIISVAQFRPEKDHPLQLRAMY 312
            +W+ +     +YPPCD E   +++ +  S  +    V+++SV Q RPEK+H LQL  ++
Sbjct: 245 SIWS-RRDVSIVYPPCDVEAFLNIESVAESLLEDTKTVRLLSVGQIRPEKNHKLQLEVLH 303

Query: 313 QLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK 372
            +++ + E++  N++L   G  RNEED+  VK +++  + L +   + +++N+PYED+  
Sbjct: 304 DVKEPL-EKMGYNVELCIAGGCRNEEDQERVKMLKNEAEKLDISEQLIWQLNVPYEDLVV 362

Query: 373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDE 432
           E S+ LI +H M NEHFGI +VE MAA  I++++ SGGP+MDIV +D E    G+L+  +
Sbjct: 363 ELSKALISIHTMHNEHFGISVVEAMAASTIILSNDSGGPRMDIV-KDYEGHCVGYLSITK 421

Query: 433 VEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKN 471
            EY +TI  I+      +    + A  S+ RF    F+ 
Sbjct: 422 EEYVETILKIVEEGLKKRNDTRKYARKSLTRFGEAAFET 460

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|O74878|ALG11_SCHPO GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=alg11 PE=3 SV=1

 Score =  322 bits (826), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 180/427 (42%), Positives = 252/427 (59%), Gaps = 27/427 (6%)

Query: 53  KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNI 112
           +TV FFHPYCNAGGGGERVLWTAV ++  ++P+    +YTGD + S +EI++R    F I
Sbjct: 55  RTVGFFHPYCNAGGGGERVLWTAVKSVQTEFPNVISVVYTGD-NVSKAEILRRVKNTFEI 113

Query: 113 VLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
            L    I FVYL  R  V A+ +  FTLLGQS+GSMILG EA+  F PDI+IDTMGYAFT
Sbjct: 114 DLDSSKIVFVYLKLRFLVSATTWHRFTLLGQSLGSMILGFEAIYRFAPDIFIDTMGYAFT 173

Query: 173 YPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFA 232
           + +        V  Y+HYPTI+ +ML             + +    +L   K+ Y++ FA
Sbjct: 174 FCVVKSFQNIPVGAYVHYPTISTDML-------------KSLKQVSLLAKVKMAYWRWFA 220

Query: 233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI 292
            LYS  G ++D +M NSSWT  H+  LW   ++   ++PPC+T +L+KI  ++   P  +
Sbjct: 221 QLYSDAGSHADYVMTNSSWTRNHIASLWGKDIQLSVVFPPCNTSELEKIDINRKREPT-L 279

Query: 293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN-LKLIFIGSTRNEEDEVCVKDMQDLCK 351
           + +AQ+RPEK+H   LR+      +  E+  D+  KL+ +GS R EED   V  ++ L  
Sbjct: 280 LYLAQYRPEKNHENVLRSF----ALYFEQHPDSPAKLLLVGSVRGEEDMCFVNHLKTLAT 335

Query: 352 HLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP 411
            L+L++ V+F V+ P+  + +      IG++ MWNEHFGIG+VE MAAGLI + + SGGP
Sbjct: 336 ELNLQSKVKFVVDAPWPKVVEYLGTCSIGVNYMWNEHFGIGVVEYMAAGLIPVVNNSGGP 395

Query: 412 KMDIVIEDPETCR-NGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFS----M 466
           K DIVI  P   +  GF A    EYA+     L LS   +  +  NA S+  RF     M
Sbjct: 396 KFDIVI--PWIGKPTGFHASTISEYAEAYHKALTLSPQEQLEMRINARSACARFGEHVFM 453

Query: 467 EEFKNGF 473
            +F N F
Sbjct: 454 RDFGNVF 460

Required for N-linked oligosaccharide assembly. Has a role in the last step of the synthesis of the Man(5)GlcNAc(2)-PP-dolichol core oligosaccharide on the cytoplasmic face of the endoplasmic reticulum.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 3

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
193594308	466	PREDICTED: asparagine-linked glycosylati	0.946	0.991	0.593	1e-160
242012529	489	glycosyl transferase, putative [Pediculu	0.969	0.967	0.558	1e-153
383849561	474	PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do	0.936	0.964	0.555	1e-152
170064341	481	alpha-1,2-mannosyltransferase alg11 [Cul	0.895	0.908	0.571	1e-149
157103404	484	glycosyl transferase [Aedes aegypti] gi|	0.971	0.979	0.527	1e-148
345487929	479	PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do	0.952	0.970	0.544	1e-147
340727563	487	PREDICTED: asparagine-linked glycosylati	0.903	0.905	0.554	1e-147
350412151	489	PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Do	0.905	0.903	0.554	1e-147
307183480	474	Asparagine-linked glycosylation protein	0.913	0.940	0.543	1e-146
332027748	474	Asparagine-linked glycosylation protein	0.905	0.932	0.561	1e-146

>gi|193594308|ref|XP_001948130.1| PREDICTED: asparagine-linked glycosylation protein 11 homolog [Acyrthosiphon pisum]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/477 (59%), Positives = 351/477 (73%), Gaps = 15/477 (3%)

Query: 11  MWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGGER 70
           M+   L Y I +L+ + I++     +L  +Y SKKRK +    ++AFFHPYCNAGGGGER
Sbjct: 1   MYFQLLLYFIFSLVAVFIVLFVFVAVLRWHYASKKRK-FPTQFSIAFFHPYCNAGGGGER 59

Query: 71  VLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV 130
           VLW AV A+   YP  KI IYTGD++ SP EIIKRA QRFNI LP+  + F+YL+RRK+V
Sbjct: 60  VLWCAVNAVSTAYPKVKIVIYTGDLEVSPVEIIKRAKQRFNIALPNN-LEFIYLHRRKWV 118

Query: 131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHY 190
           EA  YPYFTLLGQS+GS++LG+EAL  FQPDIYIDTMGYAFT PLF  IGG KV+CY+HY
Sbjct: 119 EAENYPYFTLLGQSLGSIVLGIEALRLFQPDIYIDTMGYAFTLPLFCLIGGCKVSCYVHY 178

Query: 191 PTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSS 250
           PTI+ +M+ +V          Q+      ++  KL YY++FA LY  VG ++D IMVN S
Sbjct: 179 PTISSDMINKVI---------QQKGKRRTISYIKLVYYQLFAKLYGLVGWFADSIMVNGS 229

Query: 251 WTEEHVIQLWNCQLKTYKLYPPCDTEDLK--KITHSKTDGPVKIISVAQFRPEKDHPLQL 308
           WTE+H+  LW   L TYK+YPPCDT D +   +   KT   VKIIS+AQFRPEKDHPLQL
Sbjct: 230 WTEDHINTLWKRPLSTYKVYPPCDTSDFQCLPLERQKTKS-VKIISLAQFRPEKDHPLQL 288

Query: 309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE 368
           +AMY LRQII+E +W+N++L+F+GSTRN+EDE+ V DM+DLCKHLSLENNV FKVN+ Y+
Sbjct: 289 KAMYHLRQIINEHVWENIELVFVGSTRNQEDEMRVVDMKDLCKHLSLENNVRFKVNISYD 348

Query: 369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL 428
           ++K E SEGLIGLHAMWNEHFGIG+VECMAAGLIMIAH+SGGP MDI+IED    +NGFL
Sbjct: 349 ELKNELSEGLIGLHAMWNEHFGIGVVECMAAGLIMIAHRSGGPLMDIIIEDG-AGQNGFL 407

Query: 429 ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK 485
           A +EVEYA  I   L LS   K  + + A  SV+RFS ++F + FL   QPLF   K
Sbjct: 408 ASNEVEYAHAIHKALLLSDTQKLSLQKAARGSVNRFSNQQFHDNFLRAIQPLFSFKK 464

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012529|ref|XP_002426985.1| glycosyl transferase, putative [Pediculus humanus corporis] gi|212511214|gb|EEB14247.1| glycosyl transferase, putative [Pediculus humanus corporis]

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/482 (55%), Positives = 342/482 (70%), Gaps = 9/482 (1%)

Query: 8   SVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGG 67
           S++  + FL  S+   LL++I V+  +   FK+Y    +K+ N    +  FHPYCN GGG
Sbjct: 14  SILQIIFFLICSVCLWLLIAIPVI-FTYYRFKFY----KKTKNSTLHIGIFHPYCNDGGG 68

Query: 68  GERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR 127
           GERVLW AV  + +KYP   I +YTGDV+ SP EI+ +  QRFN+    + + F YL  R
Sbjct: 69  GERVLWAAVKNIFEKYPKTNIVVYTGDVEYSPEEILSKVQQRFNLNFQGK-LEFAYLNHR 127

Query: 128 KFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACY 187
           K++E   YPYFTLLGQS+GS+ LG+EAL   QPD++IDTMGYAFTYPLF YIG  K+A Y
Sbjct: 128 KWIEPVKYPYFTLLGQSLGSIFLGMEALSLHQPDLFIDTMGYAFTYPLFKYIGHCKIATY 187

Query: 188 IHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMV 247
            HYPTIT +ML  V++RV T+NN Q VA +P LT  KL YYK+FA LY  VG+ +DI+MV
Sbjct: 188 THYPTITTDMLKIVSKRVSTYNNRQFVAKSPFLTGGKLIYYKIFAWLYGMVGRTADIVMV 247

Query: 248 NSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTD--GPVKIISVAQFRPEKDHP 305
           NS+WTE+H+ +LW   + T+ +YPPC  E+L  I     D  G +KI+S+ QFRPEK+HP
Sbjct: 248 NSTWTEQHINELWQQPMSTHCVYPPCAIENLISIPRDNVDQKGLIKILSIGQFRPEKNHP 307

Query: 306 LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL 365
           LQLRA+YQLR +ISEELW+ ++L+ +G  RN ED+  VKDM+DLCKHLSLENNV FK+N+
Sbjct: 308 LQLRALYQLRGLISEELWNRVQLVLVGGCRNAEDKRRVKDMEDLCKHLSLENNVVFKLNI 367

Query: 366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRN 425
           PY ++ KE +E  IGLHAMWNEHFGIG+VECMAAGLIM+AHKSGGPK DI+IE  E  R 
Sbjct: 368 PYSELLKELTESTIGLHAMWNEHFGIGVVECMAAGLIMVAHKSGGPKTDIIIET-EDSRT 426

Query: 426 GFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK 485
           GFLA D+ EYAQ +  IL +SQ  K +I   A SSV RFS +EF   FL    PL K + 
Sbjct: 427 GFLAVDDDEYAQVLAFILQMSQKQKEKIILAARSSVQRFSEKEFGKQFLRIMDPLLKNVN 486

Query: 486 KS 487
            S
Sbjct: 487 HS 488

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849561|ref|XP_003700413.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Megachile rotundata]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/463 (55%), Positives = 340/463 (73%), Gaps = 6/463 (1%)

Query: 24  LLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTV-AFFHPYCNAGGGGERVLWTAVLALHQK 82
           +L  +IV+P+ V+ ++   SK R   +  +TV  FFHPYCN+GGGGERVLW AV A+  +
Sbjct: 10  VLCILIVIPIMVITWRKKYSKIRARRSEKRTVVGFFHPYCNSGGGGERVLWAAVNAIQNR 69

Query: 83  YPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLG 142
           YP+  I IYTGD+DA P +I+    + FN  +  + I FVYL+RRK++EA++YPYFT+LG
Sbjct: 70  YPNVHIVIYTGDLDAHPDQILSNTEKVFNYKIKPK-IEFVYLHRRKWIEATMYPYFTILG 128

Query: 143 QSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVA 202
           QS+GS+ LG+EAL +F PDIYIDTMGYAFTYPLF YIGG +VA Y HYPTI+ +ML  V 
Sbjct: 129 QSLGSIWLGIEALNNFVPDIYIDTMGYAFTYPLFRYIGGCRVATYTHYPTISTDMLKHVY 188

Query: 203 RRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC 262
           RRVI+H N++ VA NP L++ KL YYK+F L+Y  VG+ ++IIMVNSSWTEEH+  +W C
Sbjct: 189 RRVISHTNNRVVARNPFLSAAKLAYYKLFGLIYGWVGRRAEIIMVNSSWTEEHINTIWKC 248

Query: 263 QLKTYKLYPPCDTEDLKKITHSKTDG---PVKIISVAQFRPEKDHPLQLRAMYQLRQIIS 319
            LKT+K+YPPCD + L  +     D     ++IISVAQFRPEK+HPL LRAMY+LR I+ 
Sbjct: 249 PLKTHKIYPPCDVKHLTSLPLFNDDEKSYSIRIISVAQFRPEKNHPLMLRAMYELRSIVK 308

Query: 320 EELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLI 379
           EE+W+ ++LI IGS RN EDE  VKDMQDL KH +LE NVEFK+N+PY ++  EF +  I
Sbjct: 309 EEVWEKVRLILIGSCRNSEDETRVKDMQDLSKHFALEENVEFKLNVPYSELISEFQKATI 368

Query: 380 GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTI 439
           GLH MWNEHFGI +VECMAAGLI++AH SGGP+ DI++  P + +NGFLA +  EYA+ +
Sbjct: 369 GLHTMWNEHFGISVVECMAAGLIVVAHASGGPRADIIVTQPGS-QNGFLATEAEEYAKIM 427

Query: 440 KLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK 482
             I+++  D +  I   A +SV+RFS E F+  FL   +P F+
Sbjct: 428 AHIINMHPDERKAIRMVARASVNRFSDEIFEREFLRTIEPFFR 470

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170064341|ref|XP_001867485.1| alpha-1,2-mannosyltransferase alg11 [Culex quinquefasciatus] gi|167881775|gb|EDS45158.1| alpha-1,2-mannosyltransferase alg11 [Culex quinquefasciatus]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/443 (57%), Positives = 329/443 (74%), Gaps = 6/443 (1%)

Query: 43  SKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEI 102
           +K+R + +  K VA FHPYCNAGGGGERVLW AV AL  KY   K+YIYTGD++A+  EI
Sbjct: 35  NKRRSNNDNDKYVALFHPYCNAGGGGERVLWCAVRALQNKYDGIKLYIYTGDLEATKQEI 94

Query: 103 IKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDI 162
           + +A + FN+ L  + INFVYL RRK+VEAS YPYFTLLGQSIGSM+L +EALL+ QPD+
Sbjct: 95  LDKAERTFNLSLDTKNINFVYLKRRKWVEASRYPYFTLLGQSIGSMVLAMEALLNLQPDV 154

Query: 163 YIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTS 222
           YIDTMGYAFTYP+FSYIGG K+ CY HYPTI+ +ML RV   V  +NN   VA NP  T 
Sbjct: 155 YIDTMGYAFTYPIFSYIGGCKIGCYTHYPTISTDMLRRVQANVSAYNNRSIVAKNPFATW 214

Query: 223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT 282
            K+ YY++F+ +Y  VG+ +D IMVNS+WTE H++ LW+   KT+++YPPC+   LKK+ 
Sbjct: 215 IKIVYYRIFSKIYGMVGRCADTIMVNSTWTENHILSLWDVPYKTHRVYPPCEVSHLKKL- 273

Query: 283 HSKTDGPVKII--SVAQFRPEKDHPLQLRAMYQLRQIIS--EELWDNLKLIFIGSTRNEE 338
            S   G  KI+  SV QFRPEKDHPLQL+AMY+LR +++  E LW+ L+L+ +GS R+EE
Sbjct: 274 QSLASGHEKIVILSVGQFRPEKDHPLQLQAMYELRTLLNNDEALWNRLRLMIVGSCRDEE 333

Query: 339 DEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMA 398
           D   VK+MQD  KHLSLEN+VEF+VN+ Y+++ + +    IGLHAMWNEHFGI +V+CMA
Sbjct: 334 DRERVKNMQDFAKHLSLENSVEFRVNVSYQELIQCYQVAQIGLHAMWNEHFGISVVDCMA 393

Query: 399 AGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAV 458
           AGLIM+A+KSGGP+MDI IE  E  + G+LA D  +YA+ I  IL+  ++   +I Q A 
Sbjct: 394 AGLIMVANKSGGPQMDI-IETSEGSQTGYLAVDAYDYARCIATILYNGREYNNKIRQAAR 452

Query: 459 SSVDRFSMEEFKNGFLTFTQPLF 481
           +SVDRFS +EF+NGFL    P+ 
Sbjct: 453 ASVDRFSEQEFENGFLRAISPIL 475

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157103404|ref|XP_001647965.1| glycosyl transferase [Aedes aegypti] gi|108884188|gb|EAT48413.1| AAEL000559-PA [Aedes aegypti]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/483 (52%), Positives = 346/483 (71%), Gaps = 9/483 (1%)

Query: 1   MFCCLWKSVVMWLVFLFYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHP 60
           MFC      ++++     S L + LL++ +L   ++  +   +K+R + +  K VA FHP
Sbjct: 1   MFCM---CSLIYVALFIGSFLLIGLLTVFLLLRQII--RSQKNKRRSNNDNDKYVALFHP 55

Query: 61  YCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVIN 120
           YCNAGGGGERVLW AV AL  KY   K++IYTGD++A+P EI+ +A + FNI L  + I 
Sbjct: 56  YCNAGGGGERVLWCAVKALQNKYDGIKLFIYTGDLEATPKEILGKAERTFNISLDSKRIK 115

Query: 121 FVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIG 180
           FV+L +R +VEA+ YPYFTLLGQS+GSM+LG+EALL  QPD++IDTMGYAFTYP+FSYIG
Sbjct: 116 FVFLKKRTWVEANRYPYFTLLGQSLGSMVLGMEALLKLQPDVFIDTMGYAFTYPIFSYIG 175

Query: 181 GSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGK 240
           G K+ CY HYPTI+ +ML RV  +V T NN   VA NP  T  K+ YY++F+ +Y  VG+
Sbjct: 176 GCKIGCYTHYPTISTDMLRRVQNQVNTFNNRAYVAKNPFATWIKIVYYRIFSKIYGMVGR 235

Query: 241 YSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-SKTDGPVKIISVAQFR 299
            +D +MVNSSWTE H+I LW+   KT+++YPPC+   LKK+   +     + I+SV QFR
Sbjct: 236 CADTVMVNSSWTENHIISLWDVPYKTHRVYPPCEVSHLKKLQSLASAHDKIVILSVGQFR 295

Query: 300 PEKDHPLQLRAMYQLRQIIS--EELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLEN 357
           PEKDHPLQL+AMY+LR +++  E LW+ L+L+ +GS R EED   VK+MQD  KHLSLEN
Sbjct: 296 PEKDHPLQLQAMYELRTLLNKDEALWNRLRLVIVGSCRGEEDRERVKNMQDFAKHLSLEN 355

Query: 358 NVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI 417
           +VEF+VN+ Y+++ + +    IGLHAMWNEHFGI +VECMAAGLIM+A++SGGP MDIV 
Sbjct: 356 SVEFRVNVSYQELIQCYQVATIGLHAMWNEHFGISVVECMAAGLIMVANRSGGPLMDIV- 414

Query: 418 EDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFT 477
           E  E  +NG+LA D  +YA+ I  IL+  ++   +I + A +SVDRFS +EF+NGFL   
Sbjct: 415 ETSEGSQNGYLAIDAYDYARCIATILYNGRNYNNKIREAARASVDRFSEKEFENGFLRAI 474

Query: 478 QPL 480
            P+
Sbjct: 475 SPI 477

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345487929|ref|XP_001603500.2| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Nasonia vitripennis]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/476 (54%), Positives = 328/476 (68%), Gaps = 11/476 (2%)

Query: 17  FYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLK------TVAFFHPYCNAGGGGER 70
           F  I  L+L SI++  + + L    + + R S N  K      T+  FHPYCNAGGGGER
Sbjct: 5   FIEINELVLSSILLCGVLIPLLIITLLRMRFSKNRRKRKENEITIGIFHPYCNAGGGGER 64

Query: 71  VLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV 130
           VLW AV AL  KY   +IYIYTGD+DA   +I+    + FNI + D V  F+YL+ RK+V
Sbjct: 65  VLWAAVHALQTKYQSGQIYIYTGDLDADRDKILNNVEKVFNIKVQDNV-KFIYLFTRKWV 123

Query: 131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHY 190
           EA  YPYFT+LGQS+GS+ LG EAL   QPDI+IDTMGYAFTYPLF YIGG KVA Y HY
Sbjct: 124 EADNYPYFTILGQSLGSIRLGFEALQQLQPDIFIDTMGYAFTYPLFKYIGGCKVASYTHY 183

Query: 191 PTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSS 250
           PTI+ +ML  V RR    NN + +A NP LT+ K+ YYK+FA LY  VG+ +DIIMVNSS
Sbjct: 184 PTISTDMLRHVYRRAYARNNRKVIARNPFLTAAKIVYYKIFAFLYGIVGRTADIIMVNSS 243

Query: 251 WTEEHVIQLWNCQLKTYKLYPPCDTEDLKK---ITHSKTDGPVKIISVAQFRPEKDHPLQ 307
           WTE+H+  +W C L+ +++YPPCD E L     IT  +    ++I+SV QFRPEK+HPL 
Sbjct: 244 WTEDHINSIWKCPLQIHRIYPPCDIEKLVTLPLITDEEKGDIIRIVSVGQFRPEKNHPLM 303

Query: 308 LRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY 367
           LRAMY+LR I+ EE W  ++L+ IGSTRN +DEV VKDM+DL KHL+L+ NVEF +N+ Y
Sbjct: 304 LRAMYELRSIVDEETWKKIRLVLIGSTRNHDDEVRVKDMEDLSKHLALDKNVEFHLNISY 363

Query: 368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGF 427
            D+  +  +G IGLH MWNEHFGI IVECMAAGLIM+AH SGGP+ DI IE     +NGF
Sbjct: 364 SDLITQLEQGTIGLHTMWNEHFGISIVECMAAGLIMVAHASGGPRADI-IETQTGSQNGF 422

Query: 428 LACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKV 483
           LA D  EYAQ +  I+ ++ + +  I   A SSV RFS E F+  FL   +PLF++
Sbjct: 423 LAQDAEEYAQILAYIIKMTPNERDTIRNAARSSVHRFSTEHFEKEFLRTIEPLFRL 478

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727563|ref|XP_003402111.1| PREDICTED: asparagine-linked glycosylation protein 11 homolog [Bombus terrestris]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/447 (55%), Positives = 327/447 (73%), Gaps = 6/447 (1%)

Query: 39  KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
           +Y  S+  +S+     V FFHPYCN+GGGGERVLW A+ A+  +YP+  I IYTGD+DA 
Sbjct: 40  RYSKSRMERSHKE-TVVGFFHPYCNSGGGGERVLWAAISAIQTRYPNVCIVIYTGDLDAH 98

Query: 99  PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF 158
           P +I+ +A + FN  + +  I FVYL+RRK+VE S+YPYFTLLGQS+GS+ LG+EAL SF
Sbjct: 99  PEQILNKAEKVFNYKI-EHKIKFVYLHRRKWVEPSMYPYFTLLGQSLGSIWLGIEALNSF 157

Query: 159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNP 218
            PDIYIDTMGYAFTYPLF YIGG +VA Y HYPTI+ +ML  V +RVI+H N + +A NP
Sbjct: 158 VPDIYIDTMGYAFTYPLFKYIGGCRVATYTHYPTISTDMLKHVYKRVISHTNKRVIARNP 217

Query: 219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL 278
            L++ KL YYK+F L+Y  VG  ++I+MVNSSWTEEH+  +W C LKT+K+YPPC+ + L
Sbjct: 218 FLSAAKLVYYKLFGLIYGWVGSRAEIVMVNSSWTEEHINTIWKCPLKTHKIYPPCNVKHL 277

Query: 279 KKITHSKTD---GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
             +     D     ++IISVAQFRPEK+HPL LRAMY+LR I+ EE+W+ ++LI IGS R
Sbjct: 278 TSLPLLNDDEKCNNIRIISVAQFRPEKNHPLMLRAMYELRSIVKEEIWEKIRLILIGSCR 337

Query: 336 NEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVE 395
           N EDEV +KDM+DL KH +L+ NVEFK+N+PY ++  E    +IGLH MWNEHFGI IVE
Sbjct: 338 NFEDEVRMKDMKDLSKHFALDENVEFKLNIPYSELLSELQRAMIGLHTMWNEHFGISIVE 397

Query: 396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQ 455
           CMAAGLI++AH SGGP+ DI+   P + +NGFLA +  EYA+ +  I+++  + +  I  
Sbjct: 398 CMAAGLIVVAHGSGGPRADIIETQPGS-QNGFLATEAEEYAKIMAHIINMHPEDRKAIRT 456

Query: 456 NAVSSVDRFSMEEFKNGFLTFTQPLFK 482
            A +SVDRFS E F+  FL   +P F+
Sbjct: 457 VARASVDRFSDEMFEREFLRTIEPFFR 483

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350412151|ref|XP_003489558.1| PREDICTED: GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like [Bombus impatiens]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/447 (55%), Positives = 324/447 (72%), Gaps = 5/447 (1%)

Query: 39  KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
           K Y   + +  +    V FFHPYCN+GGGGERVLW AV A+  +YP+  I IYTGD+DA 
Sbjct: 41  KQYSKSRMERSHKETVVGFFHPYCNSGGGGERVLWAAVSAIQTRYPNVCIVIYTGDLDAH 100

Query: 99  PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF 158
           P +I+ +A + FN  + +  I FVYL+RRK+VE S+YPYFTLLGQS+GS+ LG+EAL SF
Sbjct: 101 PEQILNKAEKVFNYKI-EHKIEFVYLHRRKWVEPSMYPYFTLLGQSLGSIWLGIEALNSF 159

Query: 159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNP 218
            PDIYIDTMGYAFTYPLF YIGG +VA Y HYPTI+ +ML  V RRVI+H N + +A NP
Sbjct: 160 VPDIYIDTMGYAFTYPLFKYIGGCRVATYTHYPTISTDMLRHVYRRVISHTNKRVIARNP 219

Query: 219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL 278
            L++ KL YYK+F L+Y  VG  ++I+MVNSSWTEEH+  +W C LKT+K+YPPC+ + L
Sbjct: 220 FLSAAKLVYYKLFGLIYGWVGSRAEIVMVNSSWTEEHINTIWKCPLKTHKIYPPCNVKHL 279

Query: 279 KKITHSKTD---GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
             +     D     ++IISVAQFRPEK+HPL LR MY+LR I+ EE+W+ ++LI IGS R
Sbjct: 280 TSLPLINDDEKCNNIRIISVAQFRPEKNHPLMLRTMYELRSIVKEEIWEKIRLILIGSCR 339

Query: 336 NEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVE 395
           N EDEV +KDM+DL KH +L+ NVEFK+N+PY ++  E    +IGLH MWNEHFGI IVE
Sbjct: 340 NFEDEVRMKDMKDLSKHFALDENVEFKLNIPYSELLSELQRAMIGLHTMWNEHFGISIVE 399

Query: 396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQ 455
           CMAAGLI++AH SGGP+ DI+   P + +NGFLA +  EYA+ +  I+++  + +  I  
Sbjct: 400 CMAAGLIVVAHGSGGPRADIIETQPGS-QNGFLATEAEEYAKIMAHIINMHPEDRNAIRT 458

Query: 456 NAVSSVDRFSMEEFKNGFLTFTQPLFK 482
            A +SVDRFS E F+  FL   +P F+
Sbjct: 459 VARASVDRFSDEMFEREFLRTIEPFFR 485

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183480|gb|EFN70279.1| Asparagine-linked glycosylation protein 11-like protein [Camponotus floridanus]

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/451 (54%), Positives = 322/451 (71%), Gaps = 5/451 (1%)

Query: 39  KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
           K+Y  K+ +       V  FHPYCNAGGGGERVLW A+ A+  KYPD  I IYTGD+DA 
Sbjct: 26  KFYSKKREERQQRGTVVGIFHPYCNAGGGGERVLWAAIHAIQNKYPDVHIVIYTGDLDAD 85

Query: 99  PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF 158
           P +I+ +  + FN+ L    I FVYL+RRK+VEAS+YPYFTLLGQS+GS+ LG+EAL   
Sbjct: 86  PDKILNKTEKAFNVQLRPN-IEFVYLHRRKWVEASMYPYFTLLGQSLGSIWLGIEALNKL 144

Query: 159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNP 218
            PD+YIDTMGYAFTYPLF YIGG +V  Y HYPTI+ +ML  V +R++ +NN + +  NP
Sbjct: 145 PPDVYIDTMGYAFTYPLFKYIGGCRVGSYTHYPTISTDMLRYVYKRIVAYNNRRIITRNP 204

Query: 219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL 278
            L   K+ YYK+FA LY  VG  ++ +MVNSSWTE+H+  +W C LKT+++YPPC+ E L
Sbjct: 205 FLLGVKILYYKLFAHLYGLVGSCAETVMVNSSWTEDHINSIWKCPLKTHRVYPPCNVEHL 264

Query: 279 KK---ITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
            K   ++  +    ++I+++AQFRPEK+HPL LRAM++LR I+ EE+W+ +KLI IGS R
Sbjct: 265 LKLPLLSDEEKGDCIRIVALAQFRPEKNHPLMLRAMFELRSILEEEVWERVKLICIGSCR 324

Query: 336 NEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVE 395
           + EDE  VKDMQDL KHL+L+ NVEFK+N+P+ ++  E   G IGLH MWNEHFGIG+VE
Sbjct: 325 DAEDEARVKDMQDLAKHLALDENVEFKLNIPFSELVLELQRGTIGLHTMWNEHFGIGVVE 384

Query: 396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQ 455
           CMAAGLIM+AH SGGP+ DI IE       GFLA DE EYA+ +  I+H+ QD +  I  
Sbjct: 385 CMAAGLIMVAHASGGPRADI-IETQTGSVTGFLAEDEEEYAKVLAYIIHMHQDERNAIRI 443

Query: 456 NAVSSVDRFSMEEFKNGFLTFTQPLFKVMKK 486
            A SSV+RFS + F+  FL   +P F+  ++
Sbjct: 444 AARSSVNRFSCQLFEKEFLRAVEPFFRAKQE 474

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027748|gb|EGI67815.1| Asparagine-linked glycosylation protein 11-like protein [Acromyrmex echinatior]

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 251/447 (56%), Positives = 319/447 (71%), Gaps = 5/447 (1%)

Query: 39  KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
           K+Y  K+ +       V  FHPYCNAGGGGERVLW AV A+  KYPD  I IYTGD+DA 
Sbjct: 26  KFYSKKREERQQTGTVVGIFHPYCNAGGGGERVLWAAVHAIQTKYPDIHIAIYTGDLDAD 85

Query: 99  PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF 158
           P +I+ +  + FN+ L    I FVYL+ RK+VEAS YPYFTLLGQS+GS+ LG+EAL + 
Sbjct: 86  PEKILSQTEKTFNMKLQPN-IEFVYLHGRKWVEASTYPYFTLLGQSLGSVYLGIEALNNL 144

Query: 159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNP 218
            PDIYIDTMGYAFTYPLF YIGG  V  Y HYPTI+ +ML  V +RV+ HNN + +A NP
Sbjct: 145 TPDIYIDTMGYAFTYPLFKYIGGCLVGSYTHYPTISTDMLKYVYKRVVAHNNRRIIARNP 204

Query: 219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTE-- 276
           +L+  K  YYK+FA LY  VG  +DI++VNSSWTEEH+  +W C LKT+++YPPC  E  
Sbjct: 205 LLSGGKFLYYKLFAYLYGLVGSCADIVIVNSSWTEEHINTIWKCPLKTHRVYPPCSVEHL 264

Query: 277 -DLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
             L  ++  + +  ++II++AQFRPEK+HPL LR M++LR I+ EE+W+ +KL+ IGS R
Sbjct: 265 IGLPLLSDEEKNKCIRIIAIAQFRPEKNHPLMLRVMFELRSILKEEVWEKVKLVCIGSCR 324

Query: 336 NEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVE 395
           + EDE  VKDMQDL KHL+L+ NVEFK+N+PY ++  E  +G IGLH MWNEHFGIGIVE
Sbjct: 325 DAEDERRVKDMQDLAKHLALDKNVEFKLNVPYSELVSEMQKGAIGLHTMWNEHFGIGIVE 384

Query: 396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQ 455
           CMAAGLIM+AH SGGP+ DI IE      NGFLA DE+EYA+ I  I+ +    +  I  
Sbjct: 385 CMAAGLIMVAHSSGGPRADI-IETRMGSVNGFLAEDEMEYAKVIASIIQMPPKVRNAIRI 443

Query: 456 NAVSSVDRFSMEEFKNGFLTFTQPLFK 482
            A SSV+RFS E F+  FL   +P F+
Sbjct: 444 AARSSVNRFSCEIFEKEFLRAIEPFFR 470

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	488
FB|FBgn0037108	475	CG11306 [Drosophila melanogast	0.870	0.894	0.561	7.1e-132
UNIPROTKB|E1BUY5	491	ALG11 "Uncharacterized protein	0.866	0.861	0.519	1.6e-118
UNIPROTKB|E2RR35	667	ALG11 "Uncharacterized protein	0.889	0.650	0.505	2.4e-115
UNIPROTKB|F1RMC7	492	ALG11 "Uncharacterized protein	0.891	0.884	0.504	3.9e-115
UNIPROTKB|Q2TAA5	492	ALG11 "GDP-Man:Man(3)GlcNAc(2)	0.901	0.894	0.505	1.3e-114
UNIPROTKB|E1B756	500	ALG11 "Uncharacterized protein	0.899	0.878	0.489	1.7e-114
ZFIN|ZDB-GENE-030131-7282	500	alg11 "asparagine-linked glyco	0.905	0.884	0.483	5.2e-113
MGI|MGI:2142632	492	Alg11 "asparagine-linked glyco	0.899	0.892	0.485	1.6e-111
RGD|1564725	492	Alg11 "ALG11, alpha-1,2-mannos	0.883	0.876	0.496	1.1e-110
DICTYBASE|DDB_G0292118	505	alg11 "alpha-1,2-mannosyltrans	0.883	0.853	0.443	3.7e-96

FB|FBgn0037108 CG11306 [Drosophila melanogaster (taxid:7227)]

 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 241/429 (56%), Positives = 316/429 (73%)

Query:    55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL 114
             V  FHPYCNAGGGGERVLW AV AL +KY + ++ IYTGD+DASP+ I+++A   FNI +
Sbjct:    46 VGIFHPYCNAGGGGERVLWCAVRALQEKYQNARMVIYTGDIDASPNSILQKAKNVFNIAV 105

Query:   115 PDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP 174
                 + FV+L +R ++EA  YP+FTLLGQSIGSM++G+EAL  F PDIYIDTMGYAFTYP
Sbjct:   106 DSDNVKFVFLKQRHWIEAKNYPHFTLLGQSIGSMVVGLEALCRFPPDIYIDTMGYAFTYP 165

Query:   175 LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALL 234
             LF Y+  SKV CY+HYP I+ +ML RV +R ++HNN + VA NP LT  KL YY++F+ +
Sbjct:   166 LFRYLAQSKVGCYVHYPVISTDMLKRVQQRQMSHNNKKYVARNPFLTWTKLAYYRLFSRM 225

Query:   235 YSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIIS 294
             Y  VG  ++ IMVNSSWTE H++QLW+   KT+++YPPC+   LK + H++      I+S
Sbjct:   226 YKWVGCCAETIMVNSSWTENHILQLWDVPFKTHRVYPPCEVSHLKSLQHTEKGDEFIILS 285

Query:   295 VAQFRPEKDHPLQLRAMYQLRQIISEE--LWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH 352
             V QFRPEKDHPLQL+A+Y+LR +++++  LW+ +KL+ +GS RNE+D   +K+MQDL KH
Sbjct:   286 VGQFRPEKDHPLQLQAIYELRTLLAQDEALWNQIKLVIVGSCRNEDDYERLKNMQDLTKH 345

Query:   353 LSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK 412
             LSLENNV+F VN+PYED+ K +    IG+H MWNEHFGIGIVE MAAGLIM+AHKSGGP 
Sbjct:   346 LSLENNVQFSVNVPYEDLLKLYQTAHIGIHTMWNEHFGIGIVESMAAGLIMVAHKSGGPL 405

Query:   413 MDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNG 472
             +DIV E     +NGFLA D VEYA+ I  I+ ++      I   A +SV+RFS +EF+  
Sbjct:   406 LDIV-ETSAGSQNGFLATDAVEYAENILNII-VNNSEMNGIRNAARASVERFSEQEFEKN 463

Query:   473 FLTFTQPLF 481
             FL     LF
Sbjct:   464 FLRAVSTLF 472

GO:0000026 "alpha-1,2-mannosyltransferase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|E1BUY5 ALG11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
 Identities = 225/433 (51%), Positives = 299/433 (69%)

Query:    55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL 114
             VAFFHPYCNAGGGGERVLW A+  L +KY +    +YTGD DA+  +II+ A +RFNI L
Sbjct:    64 VAFFHPYCNAGGGGERVLWCAIRTLQKKYKNVTCVVYTGDRDATEEDIIEGAFRRFNIKL 123

Query:   115 PDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP 174
                V  FV+L +R  VEASLYP+FTLLGQS+GS+ LG EALL   PDIYID+MGYAFT P
Sbjct:   124 THPV-KFVFLEKRYLVEASLYPHFTLLGQSLGSVFLGWEALLKCVPDIYIDSMGYAFTLP 182

Query:   175 LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALL 234
             LF Y+GG +V CY+HYPTI+ +ML+ V  +    NN+  + NNP+ + FKL YY +FA +
Sbjct:   183 LFKYLGGCRVGCYVHYPTISTDMLSVVRNQDTRFNNAAFITNNPLFSKFKLVYYYLFAFM 242

Query:   235 YSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT--HSKTDGPVKI 292
             Y  VG  SD++MVNSSWT  H++ LW     T  +YPPCD +    I     K      I
Sbjct:   243 YGLVGSCSDVVMVNSSWTLNHILSLWRAGPCTSVVYPPCDVQTFLDIPLEEEKNSAEYSI 302

Query:   293 ISVAQFRPEKDHPLQLRAMYQL--RQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLC 350
             +S++QFRPEKDHPLQ+RA  +L   + + ++L  +LKLI IG  RN++DE  V +++ LC
Sbjct:   303 VSISQFRPEKDHPLQIRAFAKLLKEKRLRQQL--SLKLILIGGCRNQQDEDRVNNLKSLC 360

Query:   351 KHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG 410
             + L + NNV F++N+P+E++KK  +E  IGLH MWNEHFGIG+VECMAAG +++AH SGG
Sbjct:   361 EELGVSNNVMFRINIPFEELKKHLAEATIGLHTMWNEHFGIGVVECMAAGTVILAHNSGG 420

Query:   411 PKMDIVIEDPETCR-NGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEF 469
             PK+DIV+  P   R  GFLA +E  YA+T+  I  +S + +  I ++A  SV RFS + F
Sbjct:   421 PKLDIVV--PYEGRITGFLAENEDSYAETMAYIFSMSPEKRLEIRESARQSVCRFSDQHF 478

Query:   470 KNGFLTFTQPLFK 482
             +  FL   +PLFK
Sbjct:   479 EETFLLSVEPLFK 491

GO:0009058 "biosynthetic process" evidence=IEA

UNIPROTKB|E2RR35 ALG11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
 Identities = 224/443 (50%), Positives = 301/443 (67%)

Query:    43 SKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEI 102
             SK  K   V   VAFFHPYCNAGGGGERVLW A+ AL +KYP+    +YTGDVD S  +I
Sbjct:   231 SKNGKKQTV---VAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDVDVSGQQI 287

Query:   103 IKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDI 162
             ++ A QRFNI L   V  FV+L +R  VE SLYP+FTLLGQS+GS+ LG EAL+   PD+
Sbjct:   288 LEGAFQRFNIKLTHPV-KFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQCVPDV 346

Query:   163 YIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTS 222
             YID+MGYAFT PLF Y+GG  V  Y+HYPTI+ +ML+ V  + +  NN+  +  NP L+ 
Sbjct:   347 YIDSMGYAFTLPLFKYLGGCHVGSYVHYPTISTDMLSVVKNQNVGFNNAAFITRNPFLSK 406

Query:   223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT 282
              KL YY +FA +Y  VG  SD++MVNSSWT  H++ LW     T  +YPPCD +    I 
Sbjct:   407 LKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTFLDIP 466

Query:   283 --HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQL-RQIISEELWDNLKLIFIGSTRNEED 339
                 KT     ++SV QFRPEK+HPLQ++A  +L  + ++E L  +LKL+ IG  RN++D
Sbjct:   467 LREKKTTPGHLLVSVGQFRPEKNHPLQIKAFAKLLNKKVAEPL-PSLKLVLIGGCRNQDD 525

Query:   340 EVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAA 399
             E+ V  ++ L + L ++ +VEFK+N+P++++K   SE  IGLH MWNEHFGIG+VECMAA
Sbjct:   526 ELRVNQLRRLSEDLGIQEDVEFKINIPFDELKHYLSEATIGLHTMWNEHFGIGVVECMAA 585

Query:   400 GLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVS 459
             G I++AH SGGPK+DIV+        GFLA  E +YA+T+  IL +S++ + +I  NA +
Sbjct:   586 GTIILAHNSGGPKLDIVVPHQREI-TGFLAESEEDYAETMVHILSMSEEKRLQIRSNARA 644

Query:   460 SVDRFSMEEFKNGFLTFTQPLFK 482
             SV RFS +EF+  FL+  + L K
Sbjct:   645 SVSRFSDQEFELAFLSSVENLLK 667

GO:0009058 "biosynthetic process" evidence=IEA

UNIPROTKB|F1RMC7 ALG11 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
 Identities = 223/442 (50%), Positives = 296/442 (66%)

Query:    43 SKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEI 102
             SK  KS  V   +AFFHPYCNAGGGGERVLW A+ AL +KYP+    +YTGD D S  +I
Sbjct:    56 SKTGKSQMV---IAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDADVSGQQI 112

Query:   103 IKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDI 162
             +  A +RFNI L   V  F++L +R  VEASLYP+FTLLGQS+GS+ LG EAL+   PDI
Sbjct:   113 LDGAFRRFNIRLTHPV-KFLFLRKRYLVEASLYPHFTLLGQSLGSIFLGWEALMQCVPDI 171

Query:   163 YIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTS 222
             YID+MGYAFT PLF Y+GG +V  Y+HYPTI+ +ML+ V  + +  NN+  +  NP L+ 
Sbjct:   172 YIDSMGYAFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQHVGFNNAAFITRNPFLSQ 231

Query:   223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT 282
              KL YY +FA +Y  VG  SD++MVNSSWT  H++ LW    +T+ +YPPCD +    I 
Sbjct:   232 VKLIYYHLFACVYGLVGSCSDVVMVNSSWTLNHILSLWKAGDRTHVVYPPCDVQTFLDIP 291

Query:   283 --HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDE 340
                 KT     ++S+ QFRPEK+HPLQ+RA  +L           LKL+ IG  RN++DE
Sbjct:   292 LQDKKTTSGHMLVSIGQFRPEKNHPLQIRAFAKLLSKKEAASLLPLKLVLIGGCRNQDDE 351

Query:   341 VCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAG 400
             + V  ++ L + L +  +VEFK+N+P++++K   SE  IGLH MWNEHFGIGIVECMAAG
Sbjct:   352 LRVNQLRRLSEDLGVHKDVEFKINIPFDELKNYLSEATIGLHTMWNEHFGIGIVECMAAG 411

Query:   401 LIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSS 460
              I++AH SGGPK+DIV+     C  GFLA  E  YA+T+  IL +S D +  I  +A +S
Sbjct:   412 TIVLAHNSGGPKLDIVVPHEGAC-TGFLADGEEGYAETMAQILSMSADKRLHIRNSARAS 470

Query:   461 VDRFSMEEFKNGFLTFTQPLFK 482
             V RFS +EF+  FL+  + LF+
Sbjct:   471 VSRFSDQEFEVTFLSSVEKLFQ 492

GO:0009058 "biosynthetic process" evidence=IEA

UNIPROTKB|Q2TAA5 ALG11 "GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase" [Homo sapiens (taxid:9606)]

 Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
 Identities = 226/447 (50%), Positives = 304/447 (68%)

Query:    39 KYYVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS 98
             K  VS  +   N +  +AFFHPYCNAGGGGERVLW A+ AL +KYP+    +YTGDV+ +
Sbjct:    50 KKLVSTSKNGKNQM-VIAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGDVNVN 108

Query:    99 PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF 158
               +I++ A +RFNI L   V  FV+L +R  VE SLYP+FTLLGQS+GS+ LG EAL+  
Sbjct:   109 GQQILEGAFRRFNIRLIHPV-QFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEALMQC 167

Query:   159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNP 218
              PD+YID+MGYAFT PLF YIGG +V  Y+HYPTI+ +ML+ V  + I  NN+  +  NP
Sbjct:   168 VPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQNIGFNNAAFITRNP 227

Query:   219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL 278
              L+  KL YY +FA +Y  VG  SD++MVNSSWT  H++ LW     T  +YPPCD +  
Sbjct:   228 FLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPPCDVQTF 287

Query:   279 KKIT-HSK--TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
               I  H K  T G + ++SV QFRPEK+HPLQ+RA  +L      E   +LKL+ IG  R
Sbjct:   288 LDIPLHEKKMTPGHL-LVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLVLIGGCR 346

Query:   336 NEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVE 395
             N++DE+ V  ++ L + L ++  VEFK+N+P++++K   SE  IGLH MWNEHFGIG+VE
Sbjct:   347 NKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEHFGIGVVE 406

Query:   396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQ 455
             CMAAG I++AH SGGPK+DIV+   E    GFLA  E +YA+TI  IL +S + + +I +
Sbjct:   407 CMAAGTIILAHNSGGPKLDIVVPH-EGDITGFLAESEEDYAETIAHILSMSAEKRLQIRK 465

Query:   456 NAVSSVDRFSMEEFKNGFLTFTQPLFK 482
             +A +SV RFS +EF+  FL+  + LFK
Sbjct:   466 SARASVSRFSDQEFEVTFLSSVEKLFK 492

GO:0016021 "integral to membrane" evidence=IEA

GO:0004377 "GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|E1B756 ALG11 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 220/449 (48%), Positives = 303/449 (67%)

Query:    42 VSKKRKSYNVLKT------VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDV 95
             + +K+KS +  KT      +AFFHPYCNAGGGGERVLW A+ AL +KYP+    +YTGD 
Sbjct:    47 LQRKKKSVSSSKTGKNQTVIAFFHPYCNAGGGGERVLWCALRALQKKYPEALYVVYTGDA 106

Query:    96 DASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEAL 155
             D S  +I++ A +RFNI L  + + FV+L +R  VE SLYP+FTLLGQS+GS+ LG EAL
Sbjct:   107 DVSGQQILEGAFRRFNIRLT-RPVKFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEAL 165

Query:   156 LSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVA 215
             +   PD+YID+MGYAFT PLF Y+GG +V  Y+HYPTI+ +ML+ V  + +  NN+  + 
Sbjct:   166 MQCVPDVYIDSMGYAFTLPLFKYLGGCRVGSYVHYPTISTDMLSVVKNQNVGFNNAAFIT 225

Query:   216 NNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDT 275
              NP L+  KL YY +FA +Y  VG  SDI+MVNSSWT  H++ LW     T  +YPPCD 
Sbjct:   226 RNPFLSKVKLIYYYLFAFMYGLVGSCSDIVMVNSSWTLNHILSLWKVGNCTNIVYPPCDV 285

Query:   276 EDLKKIT-HS-KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS 333
             +    +  H  K      ++S+ QFRPEK+HPLQ+RA  +L      E    LKL+ IG 
Sbjct:   286 QTFLDLPLHEEKATSEHLLVSIGQFRPEKNHPLQIRAFAKLLNKKESESLPPLKLVLIGG 345

Query:   334 TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGI 393
              RN++DE+ V  ++ L + L ++ +VEFK+N+P++++K   SE  +GLH MWNEHFGIGI
Sbjct:   346 CRNQDDELRVNQLRRLAEDLGVQEDVEFKINIPFDELKNYLSEATVGLHTMWNEHFGIGI 405

Query:   394 VECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRI 453
             VECMAAG+I++AH SGGPK+DIV+      R GFLA  E  YA+T+  IL +S + + +I
Sbjct:   406 VECMAAGMIVLAHNSGGPKLDIVVPHHGE-RTGFLAESEEGYAETMAHILSMSAEQRLQI 464

Query:   454 SQNAVSSVDRFSMEEFKNGFLTFTQPLFK 482
               +A +SV RFS +EF+  FL+  + LF+
Sbjct:   465 RNSARASVSRFSDQEFEVAFLSSVERLFQ 493

GO:0009058 "biosynthetic process" evidence=IEA

ZFIN|ZDB-GENE-030131-7282 alg11 "asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)" [Danio rerio (taxid:7955)]

 Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
 Identities = 221/457 (48%), Positives = 304/457 (66%)

Query:    41 YVSKKRKSYNVLK---TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDA 97
             ++  KRK+  V      VAFFHPYCNAGGGGERVLW A+ AL  +Y D    +YTGD   
Sbjct:    46 WLQMKRKTRRVQDGRPAVAFFHPYCNAGGGGERVLWCALRALQNRYQDVSFVVYTGDQGV 105

Query:    98 SPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLS 157
             +  EI+  A +RFNI LP + + FV+L  R  VEA LYP+FTLLGQS+GS+ LG EAL  
Sbjct:   106 TAEEILDGARRRFNIRLP-RPVKFVFLKHRLLVEAKLYPHFTLLGQSVGSIFLGWEALTE 164

Query:   158 FQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANN 217
             F PD+YID+MG+AFT P+F Y+GG +V  Y+HYPTI+ +ML+ V  R    NN+  +++N
Sbjct:   165 FVPDLYIDSMGFAFTLPVFRYLGGCQVGSYVHYPTISTDMLSVVRERNPRFNNADYISSN 224

Query:   218 PILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTED 277
             P+L++ K+ YY VFALLY   G  SD+IMVNS+WT  H++ LW    +T  +YPPCD + 
Sbjct:   225 PVLSAIKVIYYCVFALLYGLAGSCSDVIMVNSTWTLGHILALWRTPNRTSVVYPPCDVQA 284

Query:   278 LKKITHSKTDGPVK-------IISVAQFRPEKDHPLQLRAMYQL--RQIISEELWDNLKL 328
                +   + D   K       ++SV QFRPEKDH LQ+RA  +L  R+ +     + +KL
Sbjct:   285 FLDVPIGE-DNEEKEQKKCHSLVSVGQFRPEKDHQLQIRAFKKLLDRKEVEPAGREAVKL 343

Query:   329 IFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEH 388
             + IG  RN+EDE  V  ++ LC+ L + + VEFK+N+P++++KK+ ++  IGLH MWNEH
Sbjct:   344 VLIGGCRNQEDEDRVLMLRGLCQELGIADRVEFKLNIPFQELKKDLTDATIGLHTMWNEH 403

Query:   389 FGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQD 448
             FGIGIVECMAAG I++AHKSGGPK+DIV+   +    GFLA DE  YA  ++ IL +S  
Sbjct:   404 FGIGIVECMAAGTIILAHKSGGPKLDIVVPY-DGGPTGFLADDEDNYADAMERILSMSPA 462

Query:   449 TKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK 485
             T+  + + A  SV RFS +EF+  FL+  +PL   ++
Sbjct:   463 TRLEMRRRARLSVSRFSDQEFEGSFLSAMEPLMSTLR 499

GO:0009058 "biosynthetic process" evidence=IEA

MGI|MGI:2142632 Alg11 "asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)" [Mus musculus (taxid:10090)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 219/451 (48%), Positives = 304/451 (67%)

Query:    39 KYYVSKKRKSYNVLKT------VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYT 92
             ++++ +K+KS +  K       VAFFHPYCNAGGGGERVLW A+ AL +KYP+    +YT
Sbjct:    43 RWHLQRKKKSVSTSKNGKEQTVVAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYT 102

Query:    93 GDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGV 152
             GD++ S  +I+  A +RFNI L   V  FV+L +R  VE S YP+FTLLGQS+GS++LG 
Sbjct:   103 GDINVSGQQILDGAFRRFNIKLAHPV-QFVFLRKRYLVEDSRYPHFTLLGQSLGSILLGW 161

Query:   153 EALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQ 212
             EAL+   PD+YID+MGYAFT PLF Y+GG +V  Y+HYPTI+ +ML+ V  +    NN+ 
Sbjct:   162 EALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTISTDMLSVVKNQNPGFNNAA 221

Query:   213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP 272
              ++ N +L+  KL YY +FA +Y  VG  SDI+MVNSSWT  H++ LW     T  +YPP
Sbjct:   222 FISRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLNHILSLWKVGHCTNIVYPP 281

Query:   273 CDTEDLKKIT-HSK--TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI 329
             CD +    I  H K  T G + ++S+ QFRPEK+H LQ++A  +L    + EL  +LKL+
Sbjct:   282 CDVQTFLDIPLHEKKVTPGHL-LVSIGQFRPEKNHALQIKAFAKLLNEKAAELGHSLKLV 340

Query:   330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF 389
              IG  RN++DE  V  ++ L ++L ++ NVEFK+N+ ++++K   SE  IGLH MWNEHF
Sbjct:   341 LIGGCRNKDDEFRVNQLRSLSENLGVQENVEFKINISFDELKNYLSEATIGLHTMWNEHF 400

Query:   390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDT 449
             GIG+VECMAAG +++AH SGGPK+DIVI   E    GFLA  E  YA ++  IL LS + 
Sbjct:   401 GIGVVECMAAGTVILAHNSGGPKLDIVIPH-EGQITGFLAESEEGYADSMAHILSLSAEE 459

Query:   450 KTRISQNAVSSVDRFSMEEFKNGFLTFTQPL 480
             + +I +NA +S+ RFS +EF+  FL   + L
Sbjct:   460 RLQIRKNARASISRFSDQEFEVAFLCSMEKL 490

GO:0003674 "molecular_function" evidence=ND

GO:0004377 "GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1564725 Alg11 "ALG11, alpha-1,2-mannosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 220/443 (49%), Positives = 299/443 (67%)

Query:    41 YVSKKRKSYNVLKT------VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGD 94
             ++ +K+KS +  K       VAFFHPYCNAGGGGERVLW A+ AL +KYPD    +YTGD
Sbjct:    45 HLQRKKKSASTSKNGKDQMVVAFFHPYCNAGGGGERVLWCALRALQKKYPDAVYVVYTGD 104

Query:    95 VDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEA 154
             +  S  +I++ A +RFNI L   V  FV+L +R  VE S YP+FTLLGQS+GS++LG EA
Sbjct:   105 IHVSGQQILEGAFRRFNIKLVHPV-QFVFLRKRYLVEDSRYPHFTLLGQSLGSILLGWEA 163

Query:   155 LLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRV 214
             L+   PD+YID+MGYAFT PLF Y+GG +V  Y+HYPTI+ +ML+ V  +    NN+  +
Sbjct:   164 LMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTISTDMLSVVKNQNPGFNNAAFI 223

Query:   215 ANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCD 274
             + N +L+  KL YY +FA +Y  VG  SDI+MVNSSWT  H++ LW     T  +YPPCD
Sbjct:   224 SRNALLSKAKLIYYYLFAFVYGLVGSCSDIVMVNSSWTLNHILSLWKVGHCTNIVYPPCD 283

Query:   275 TEDLKKIT-HSK--TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFI 331
              +    I  H K  T G + ++S+ QFRPEK+H LQ++A  +L    + E   +LKL+ I
Sbjct:   284 VQTFLDIPLHEKKVTPGHL-LVSIGQFRPEKNHALQIKAFAKLLNEKAAESRHSLKLVLI 342

Query:   332 GSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGI 391
             G  RN++DE  V  ++ L ++L ++ NVEFK+N+ ++++K   SE  IGLH MWNEHFGI
Sbjct:   343 GGCRNKDDEFRVNQLRRLSENLGVQENVEFKINISFDELKNYLSEATIGLHTMWNEHFGI 402

Query:   392 GIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKT 451
             G+VECMAAG I++AH SGGPK+DIVI   E    GFLA  E  YA+T+  IL LS + + 
Sbjct:   403 GVVECMAAGTIILAHNSGGPKLDIVIPH-EGQITGFLAESEEGYAETMAHILSLSPEKRL 461

Query:   452 RISQNAVSSVDRFSMEEFKNGFL 474
             RI + A +S+ RFS +EF+  FL
Sbjct:   462 RIRETARASLSRFSDQEFEVAFL 484

GO:0009058 "biosynthetic process" evidence=IEA

DICTYBASE|DDB_G0292118 alg11 "alpha-1,2-mannosyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 198/446 (44%), Positives = 285/446 (63%)

Query:    41 YVSKKRKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPS 100
             Y SKK  S  V  ++ FFHPYC AGGGGERVLW A+ ++ ++YP  +  +YTGD + S  
Sbjct:    53 YGSKKDLS-EV--SIGFFHPYCTAGGGGERVLWCAIKSIQEEYPYVRCVVYTGDKE-SDD 108

Query:   101 EIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQP 160
             EI  +  + F+I L    + F+ L +RK+VEAS YP FTL+GQS+GSMILG EAL  F P
Sbjct:   109 EIFNKVKKTFDIELGRDNLEFIRLKKRKWVEASTYPRFTLIGQSLGSMILGWEALTKFVP 168

Query:   161 DIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPIL 220
              I++D+MGYAFT+P+FS IGGS VACY+HYPTI+ +M++ V     + NN   +++N   
Sbjct:   169 TIFLDSMGYAFTFPIFSLIGGSTVACYVHYPTISSDMISSVKSSSYSFNNDVSISSNKFK 228

Query:   221 TSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL--KTYKLYPPCDTEDL 278
             T  KL YY +F+ +Y  VG +S ++MVN +WT  H+  +W  Q     + +YPP D +  
Sbjct:   229 TISKLIYYNIFSKIYQIVGSFSKLVMVNGTWTGNHIRDIWKKQFGYDLFIVYPPVDVKGR 288

Query:   279 KKITHSKTDGPVK--IISVAQFRPEKDHPLQLRAM-YQLRQIISE-ELWDNLKLIFIGST 334
             K++     DG  K  I+S+AQFRPEK+H LQLR + + L +  S  E   N KL+ +G  
Sbjct:   289 KQLKLGWMDGTRKNMILSIAQFRPEKNHQLQLRTLAHLLEKYPSHREQPLNTKLVLVGGV 348

Query:   335 RNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIV 394
             R++ D   V+ +++L K L++E++VEF++ +  + + +  SE  +G+H M+NEHFGIG+V
Sbjct:   349 RDQADRDRVEQLRNLSKELNIEDHVEFQIGISSDQLNQLLSEASVGIHTMYNEHFGIGVV 408

Query:   395 ECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRIS 454
             E MAAG+I +A+ S GPK DIV  + +T   GFLA    EYA+ I  IL   ++    + 
Sbjct:   409 ELMAAGVIPVANNSAGPKEDIVRHE-DT---GFLASTIQEYAEYIHEILAY-REKYVEMQ 463

Query:   455 QNAVSSVDRFSMEEFKNGFLTFTQPL 480
             + A  S DRFS   F N FL + +PL
Sbjct:   464 KKARDSTDRFSESNFSNQFLKYIKPL 489

GO:0009058 "biosynthetic process" evidence=IEA

GO:0004377 "GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=ISS

GO:0000026 "alpha-1,2-mannosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R7Z6	ALG11_PONAB	2, ., 4, ., 1, ., 1, 3, 1	0.4813	0.9590	0.9512	yes	N/A
Q6FWD1	ALG11_CANGA	2, ., 4, ., 1, ., 1, 3, 1	0.4180	0.7192	0.6950	yes	N/A
Q75B12	ALG11_ASHGO	2, ., 4, ., 1, ., 1, 3, 1	0.3866	0.7336	0.6151	yes	N/A
P53993	YMP8_CAEEL	2, ., 4, ., -, ., -	0.4030	0.9118	0.9468	yes	N/A
Q54DM9	ALG11_DICDI	2, ., 4, ., 1, ., 1, 3, 1	0.4387	0.8627	0.8336	yes	N/A
Q3TZM9	ALG11_MOUSE	2, ., 4, ., 1, ., 1, 3, 1	0.4626	0.9672	0.9593	yes	N/A
Q6CLD6	ALG11_KLULA	2, ., 4, ., 1, ., 1, 3, 1	0.3684	0.8278	0.7087	yes	N/A
Q6P312	ALG11_XENTR	2, ., 4, ., 1, ., 1, 3, 1	0.4927	0.9446	0.9466	yes	N/A
Q08B22	ALG11_XENLA	2, ., 4, ., 1, ., 1, 3, 1	0.5063	0.9385	0.9423	N/A	N/A
Q2TAA5	ALG11_HUMAN	2, ., 4, ., 1, ., 1, 3, 1	0.4792	0.9590	0.9512	yes	N/A
Q7ZW24	ALG11_DANRE	2, ., 4, ., 1, ., 1, 3, 1	0.4640	0.9672	0.944	yes	N/A
P53954	ALG11_YEAST	2, ., 4, ., 1, ., 1, 3, 1	0.3952	0.7110	0.6332	yes	N/A
O74878	ALG11_SCHPO	2, ., 4, ., 1, ., 1, 3, 1	0.4215	0.8196	0.8492	yes	N/A
Q9XEE9	ALG11_ARATH	2, ., 4, ., 1, ., 1, 3, 1	0.4291	0.9282	0.9784	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	488
cd03806	419	cd03806, GT1_ALG11_like, This family is most close	0.0
PLN02949	463	PLN02949, PLN02949, transferase, transferring glyc	1e-169
cd03805	392	cd03805, GT1_ALG2_like, This family is most closel	6e-23
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	2e-19
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	1e-18
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	9e-18
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	2e-12
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	3e-12
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	9e-12
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	2e-10
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	3e-10
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	1e-09
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	1e-08
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	1e-06
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	2e-06
cd04949	372	cd04949, GT1_gtfA_like, This family is most closel	2e-06
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	3e-05
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	9e-05
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	2e-04
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	4e-04
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	0.001
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	0.001

>gnl|CDD|99978 cd03806, GT1_ALG11_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  638 bits (1649), Expect = 0.0
 Identities = 227/419 (54%), Positives = 294/419 (70%), Gaps = 1/419 (0%)

Query: 53  KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNI 112
            TV FFHPYCNAGGGGERVLW AV AL ++YP+  + IYTGD+DA+P EI+++   RFNI
Sbjct: 1   NTVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNI 60

Query: 113 VLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT 172
            L    I F  L  RK VEAS YP FTLLGQ++GSMILG+EALL   PDI+IDTMGY FT
Sbjct: 61  ELDRPRIVFFLLKYRKLVEASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFT 120

Query: 173 YPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFA 232
           YPL   +GG  V  Y+HYPTI+ +ML +V  R  ++NNS  +A +P+L+  KL YY++FA
Sbjct: 121 YPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFA 180

Query: 233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI 292
            LY   G ++D++MVNS+WT  H+  LW    K   +YPPCD E+L K+   +     +I
Sbjct: 181 FLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQI 240

Query: 293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH 352
           +S+AQFRPEK+HPLQLRA  +L + + EE+ + +KL+ IGS RNE+DE  V+D++ L K 
Sbjct: 241 LSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKE 300

Query: 353 LSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK 412
           L LE+ VEF VN P+E++ +E S   IGLH MWNEHFGIG+VE MAAGLI +AH SGGP 
Sbjct: 301 LGLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL 360

Query: 413 MDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKN 471
           +DIV+        GFLA    EYA+ I+ IL LS++ + RI + A SSV RFS EEF+ 
Sbjct: 361 LDIVVPWDGG-PTGFLASTAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEFER 418

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. Length = 419

>gnl|CDD|215511 PLN02949, PLN02949, transferase, transferring glycosyl groups

 Score =  484 bits (1248), Expect = e-169
 Identities = 198/474 (41%), Positives = 280/474 (59%), Gaps = 19/474 (4%)

Query: 10  VMWLVFL-FYSILALLLLSIIVLPLSVLLFKYYVSKKRKSYNVLKTVAFFHPYCNAGGGG 68
            +WL+     + + LLL++I +  L            R   +  + V FFHPY N GGGG
Sbjct: 2   AIWLILYHLLTSIVLLLVAIALSVL------------RARRSRKRAVGFFHPYTNDGGGG 49

Query: 69  ERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRK 128
           ERVLW AV A+ ++ PD    IYTGD DASP  +  RA  RF + L       V+L +RK
Sbjct: 50  ERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELL-SPPKVVHLRKRK 108

Query: 129 FVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYI 188
           ++E   YP FT++GQS+GS+ L  EAL  F P  + DT GYAFTYPL + + G KV CY 
Sbjct: 109 WIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPL-ARLFGCKVVCYT 167

Query: 189 HYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVN 248
           HYPTI+ +M++RV  R   +NN   +A +  L++ K+ YY+ FA +Y  VG+ + + MVN
Sbjct: 168 HYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVN 227

Query: 249 SSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQL 308
           SSWT+ H+  LW    +  ++YPPCDT  L+ +   +++ P  IISVAQFRPEK H LQL
Sbjct: 228 SSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHALQL 287

Query: 309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE 368
            A     + +  ++    KL F+GS RN+EDE  ++ ++D  K L L+ +VEF  N+ Y 
Sbjct: 288 EAFALALEKLDADV-PRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYR 346

Query: 369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI-EDPETCRNGF 427
           D+ +     + GLH+M +EHFGI +VE MAAG + IAH S GPKMDIV+ ED +  + GF
Sbjct: 347 DLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQ--QTGF 404

Query: 428 LACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF 481
           LA    EYA  I  +L + +  +  I+  A    +RFS + F   F    +P+ 
Sbjct: 405 LATTVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458

Length = 463

>gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =   99 bits (250), Expect = 6e-23
 Identities = 114/445 (25%), Positives = 185/445 (41%), Gaps = 85/445 (19%)

Query: 53  KTVAFFHPYCNAG-GGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS--PSEIIKRAHQR 109
             VAF HP    G GG ER++  A LAL  +   +++ IYT   D S    E        
Sbjct: 1   LRVAFIHPDL--GIGGAERLVVDAALALQSR--GHEVTIYTSHHDPSHCFEETK------ 50

Query: 110 FNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSF---QPDIYI-D 165
            +  LP +V       R  ++  S++  F +L   +  M+     LL     + D++I D
Sbjct: 51  -DGTLPVRV-------RGDWLPRSIFGRFHILCAYL-RMLYLALYLLLLPDEKYDVFIVD 101

Query: 166 TMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKL 225
            +  +   PL      SK+  Y H+P                    Q +A     +  K 
Sbjct: 102 QV--SACVPLLKLFSPSKILFYCHFP-------------------DQLLAQRG--SLLKR 138

Query: 226 FYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYK---LYPPCDTEDLKKIT 282
            Y K F  L       +D I+VNS++T     + +   L       +YP  DT+  +  +
Sbjct: 139 LYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFP-SLAKNPREVVYPCVDTDSFESTS 197

Query: 283 HSKTDGPVKI-------ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS-- 333
                G +         +S+ +F  +K+  L + A   L+  ++E  + N++L+  G   
Sbjct: 198 EDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAE--FKNVRLVIAGGYD 255

Query: 334 TRNEEDEVCVKDMQDLC-KHLSLENNVEFKVNLPYEDMKKE--FSEGLIGLHAMWNEHFG 390
            R  E+   ++++Q L  + L LE+ V F  ++   D +KE   S     L+   NEHFG
Sbjct: 256 PRVAENVEYLEELQRLAEELLLLEDQVIFLPSIS--DSQKELLLSSARALLYTPSNEHFG 313

Query: 391 IGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRN---GFLACD--EVEYAQTIKLILHL 445
           I  +E M AG  +IA  SGGP         ET  +   GFL C+    E+A+ +  + + 
Sbjct: 314 IVPLEAMYAGKPVIACNSGGPL--------ETVVDGETGFL-CEPTPEEFAEAMLKLAN- 363

Query: 446 SQDTKTRISQNAVSSV-DRFSMEEF 469
             D   R+       V ++FS E F
Sbjct: 364 DPDLADRMGAAGRKRVKEKFSTEAF 388

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score = 89.6 bits (221), Expect = 2e-19
 Identities = 64/367 (17%), Positives = 126/367 (34%), Gaps = 26/367 (7%)

Query: 118 VINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFS 177
           V+      R       +        + +G  +L + ++      + +          L  
Sbjct: 21  VLELAKALRLLGRGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKR 80

Query: 178 YIGGSKVACYIHYPTITKEMLTRVARR------VITHNNSQRVANNPILTSFKLFYYKVF 231
            +    +  +         +   + +       V  H    R+   P L         + 
Sbjct: 81  LLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLL 140

Query: 232 ALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH--SKTDGP 289
             L   +   +D ++  S   +E +  L     K   +    DTE             G 
Sbjct: 141 KRLKKALRLLADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGK 199

Query: 290 VKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDL 349
             ++ V +  PEK   L + A  +L++        ++KL+ +G      +E     ++ L
Sbjct: 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRG-----PDIKLVIVGDGPERREE-----LEKL 249

Query: 350 CKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSG 409
            K L LE+NV+F   +P E++ +  +   + +    +E FG+ ++E MAAG  +IA   G
Sbjct: 250 AKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG 309

Query: 410 GPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME 467
           G   ++V +       G L    D  E A  ++ +L   +  +           + FS E
Sbjct: 310 GIP-EVVEDG----ETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEFSWE 364

Query: 468 EFKNGFL 474
                 L
Sbjct: 365 RIAEQLL 371

Length = 381

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score = 87.1 bits (216), Expect = 1e-18
 Identities = 79/426 (18%), Positives = 143/426 (33%), Gaps = 75/426 (17%)

Query: 55  VAFFHPYCN-AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIV 113
           +    P    + GG ER +     AL  +   +++ + T      P             V
Sbjct: 2   ILLVTPEYPPSVGGAERHVLELARALAAR--GHEVTVLTPGDGGLP---------DEEEV 50

Query: 114 LPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY 173
               V+    L R + +   L     L              L   + D+      +A  +
Sbjct: 51  GGIVVVRPPPLLRVRRLLLLLLLALRLR-----------RLLRRERFDVV-----HAHDW 94

Query: 174 PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL 233
                   +                      V+T +  +       L         +   
Sbjct: 95  LALLAAALAARL--------------LGIPLVLTVHGLEFGRPGNELGLLLKLARALERR 140

Query: 234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTE-------DLKKITHSK 285
                 + +D I+  S  T E + +L      K   +    DTE         ++     
Sbjct: 141 AL----RRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIP 196

Query: 286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKD 345
            D PV I+ V +  P K   L L A+ +LR+        +++L+ +G      +E     
Sbjct: 197 EDEPV-ILFVGRLVPRKGVDLLLEALAKLRKEYP-----DVRLVIVG-DGPLREE----- 244

Query: 346 MQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA 405
           ++ L   L L + V F   +P ED+   ++   + +     E FG+ ++E MAAGL ++A
Sbjct: 245 LEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVA 304

Query: 406 HKSGGPKMDIVIEDPETCRNGFLA--CDEVEYAQTIKLILHLSQDTKTRISQNAVSSV-D 462
              GG   ++V +       G L    D    A+ I  +L    + + R+ + A   V +
Sbjct: 305 SDVGGIP-EVVEDG----ETGLLVPPGDPEALAEAILRLLD-DPELRRRLGEAARERVAE 358

Query: 463 RFSMEE 468
           RFS + 
Sbjct: 359 RFSWDR 364

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score = 80.0 bits (198), Expect = 9e-18
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 19/172 (11%)

Query: 288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQ 347
               I+ V +  PEK   L L A   L++        NLKL+ +G    EE +     ++
Sbjct: 1   DKPIILFVGRLVPEKGLDLLLEAFALLKEQH-----PNLKLVIVGD-GEEEKK-----LK 49

Query: 348 DLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHK 407
            L   L LE+NV F   +P ED+ + +    + +     E FG+ ++E MAAG+ +IA  
Sbjct: 50  KLALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATD 109

Query: 408 SGGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNA 457
            GGP  +IV +       G L    D    A+ I+ +L   ++ + R+ +NA
Sbjct: 110 VGGPA-EIVKDG----ETGLLVDPGDAEALAEAIEKLLK-DEELRERLGENA 155

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 68.3 bits (168), Expect = 2e-12
 Identities = 88/431 (20%), Positives = 138/431 (32%), Gaps = 94/431 (21%)

Query: 55  VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIY-IYTGDVDASPSEIIKRAHQRFNIV 113
           VA  H +    GGGE+V    V AL + +PD  I+ +            +K+    F   
Sbjct: 2   VAIVHDWLVNIGGGEKV----VEALARLFPDADIFTLVDDPDKLPRLLRLKKIRTSFIQK 57

Query: 114 LPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY 173
           LP          RR++     Y            M L +E       D+ I +  +A   
Sbjct: 58  LP--------FARRRYR---KYLPL---------MPLAIEQFDLSGYDLVISS-SHAVAK 96

Query: 174 PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFY-YKVFA 232
            + +      + CY H P            R         +  + +     L        
Sbjct: 97  GVITRPDQLHI-CYCHTPM-----------RYAWDLYHDYLKESGLGKRLALRLLLHYLR 144

Query: 233 LLYSHVGKYSDIIMVNSSWTEEHV---IQLWNCQLKTYK-----LYPPCDTEDLKKITHS 284
           +         D  + NS      V   I+      K Y      +YPP DT+   + T +
Sbjct: 145 IWDRRSAARVDYFIANS----RFVARRIK------KYYGRDATVIYPPVDTD---RFTPA 191

Query: 285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVK 344
           +       +SV +  P K   L + A  +L            +L+ IG    E D +  K
Sbjct: 192 EEKEDY-YLSVGRLVPYKRIDLAIEAFNKL----------GKRLVVIGDGP-ELDRLRAK 239

Query: 345 DMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMI 404
                        NV F   +  ++  ++             E FGI  VE MA+G  +I
Sbjct: 240 ----------AGPNVTFLGRVS-DEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVI 288

Query: 405 AHKSGGPKMDIVIEDPETCRNGFL-ACDEVE-YAQTIKLILHLSQDTKTRISQNAVSSVD 462
           A+  GG   + VI+       G L     VE  A  ++            I  +A    +
Sbjct: 289 AYGKGGAL-ETVIDGV----TGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHA----E 339

Query: 463 RFSMEEFKNGF 473
           RFS   F+   
Sbjct: 340 RFSESRFREKI 350

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 77/432 (17%), Positives = 149/432 (34%), Gaps = 83/432 (19%)

Query: 51  VLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRF 110
           +L   + + P  N  GGG   +     AL +     ++ +          +++     R 
Sbjct: 1   ILVISSLYPPPNN--GGGGIFVKELARALAK--RGVEVTVLAPG--PWGPKLLDLLKGRL 54

Query: 111 NIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDI----YIDT 166
             V    V+  V    +  +       + L  +++  ++     L  F+PD+    +   
Sbjct: 55  VGVERLPVLLPVVPLLKGPL------LYLLAARALLKLL----KLKRFRPDLIHAHFAYP 104

Query: 167 MGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF 226
            G+A    L     G  +   +H   +      R+ R ++                    
Sbjct: 105 DGFAAA--LLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRR------------------ 144

Query: 227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTY--------KLYPPCDTEDL 278
                        + +D ++  S    + +  L     K          + + P D  + 
Sbjct: 145 -----------ALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEA 193

Query: 279 KKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEE 338
           +K      +    I+ V +  P K     + A+ +L +        ++ L+ +G     E
Sbjct: 194 RK--LGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKR-----PDVHLVIVGDGPLRE 246

Query: 339 DEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMA 398
                   + L   L LE+ V F   +P+E++   ++   + +     E FG+ ++E MA
Sbjct: 247 AL------EALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMA 300

Query: 399 AGLIMIAHKSGGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQN 456
            GL ++A   GG     +I D E   NG L    D    A+ I  +L    D   R+ + 
Sbjct: 301 CGLPVVATDVGGIPE--IITDGE---NGLLVPPGDPEALAEAILRLL---ADPWLRLGRA 352

Query: 457 AVSSV-DRFSME 467
           A   V +RFS E
Sbjct: 353 ARRRVAERFSWE 364

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 65.8 bits (161), Expect = 9e-12
 Identities = 80/434 (18%), Positives = 140/434 (32%), Gaps = 101/434 (23%)

Query: 55  VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL 114
           + F  P    GGG ERVL    LA       Y + +           ++ R    +  +L
Sbjct: 2   ILFVIP-SLGGGGAERVL--LNLANGLDKRGYDVTL-----------VVLRDEGDYLELL 47

Query: 115 PDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMG-YAFTY 173
           P  V        +      L     L              L   +PD+ I  +       
Sbjct: 48  PSNVKLIPVRVLKLKSLRDLLAILRL-----------RRLLRKEKPDVVISHLTTTPNVL 96

Query: 174 PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL 233
            L +   G+K+  + H                    + +      +L   +  Y +    
Sbjct: 97  ALLAARLGTKLIVWEH-----------------NSLSLELKRKLRLLLLIRKLYRRA--- 136

Query: 234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKK-----ITHSKTD 287
                    D I+  S   +E +++L      K   +Y P D E+++      +      
Sbjct: 137 ---------DKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187

Query: 288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQ 347
               I++V +  P+K     +RA   LR+        + +L+ +G       E    +++
Sbjct: 188 DGPVILAVGRLSPQKGFDTLIRAFALLRK-----EGPDARLVILG--DGPLRE----ELE 236

Query: 348 DLCKHLSLENNVEF--KVNLPYEDMKK-------EFSEGLIGLHAMWNEHFGIGIVECMA 398
            L K L L + V F    + PY  +K           EG           F   ++E MA
Sbjct: 237 ALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEG-----------FPNVLLEAMA 285

Query: 399 AGLIMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEVEYAQTIKLILHLSQDTKTRISQN 456
            G  ++A    GP+ +I+ +      NG L    DE   A     +L L  D + R  + 
Sbjct: 286 LGTPVVATDCPGPR-EILEDG----ENGLLVPVGDEAALAAAALALLDLLLDPELR--ER 338

Query: 457 AVSSVDRFSMEEFK 470
             ++       E+ 
Sbjct: 339 LAAAARERVAREYS 352

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 62.2 bits (152), Expect = 2e-10
 Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 31/237 (13%)

Query: 234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKII 293
           LYS  G Y   I          V+      +   +  P    E  +       D P  I+
Sbjct: 178 LYSLYGAYPRRI---------RVVP---PGVDLERFTPYGRAEARRARLLRDPDKPR-IL 224

Query: 294 SVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHL 353
           +V +  P K     +RA  +L      EL +   L+ +G  R++   +  +++++L + L
Sbjct: 225 AVGRLDPRKGIDTLIRAYAELP-----ELRERANLVIVGGPRDDILAMDEEELRELAREL 279

Query: 354 SLENNVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGP 411
            + + V+F   +  ED+   +      +       E FG+  +E MA GL ++A   GGP
Sbjct: 280 GVIDRVDFPGRVSREDLPALYRAA--DVFVNPALYEPFGLTALEAMACGLPVVATAVGGP 337

Query: 412 KMDIVIEDPETCRNGFLA--CDEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFS 465
           + DIV         G L    D    A  ++ +L      + R+S+  +     R++
Sbjct: 338 R-DIV----VDGVTGLLVDPRDPEALAAALRRLLT-DPALRRRLSRAGLRRARARYT 388

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 59.9 bits (145), Expect = 3e-10
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 294 SVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHL 353
            V +  PEK     + A   L++        +LKL+  G     E       +++L   L
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGP-----DLKLVIAGDGPEREY------LEELLAAL 157

Query: 354 SLENNVEFKVNLPYEDMKKEFSEGL-IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK 412
            L + V F   L  E++         + +     E FG+ ++E MA GL +IA   GGP 
Sbjct: 158 LLLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217

Query: 413 MDIVIEDPETCRNGFL 428
            +IV +       G L
Sbjct: 218 -EIVEDG----LTGLL 228

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 21/201 (10%)

Query: 270 YPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI 329
           + P D +D ++      D PV ++ V +   EK+    +RA  +L      +   ++KL+
Sbjct: 184 FEPVDGDDERRKLGIPEDEPV-LLYVGRLAKEKNIDFLIRAFARLL-----KEEPDVKLV 237

Query: 330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF 389
            +G    E      +++++L + L L + V F   +P E++   +    + + A   E  
Sbjct: 238 IVGDG-PER-----EELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQ 291

Query: 390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQD- 448
           G+ ++E MAAGL ++A  + G   D+V  D E   NGFL     E     + +L L QD 
Sbjct: 292 GLVLLEAMAAGLPVVAVDAPGLP-DLV-ADGE---NGFLFPPGDEAL--AEALLRLLQDP 344

Query: 449 -TKTRISQNAVSSVDRFSMEE 468
             + R+S+NA  S ++FS  +
Sbjct: 345 ELRRRLSKNAEESAEKFSFAK 365

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 70/412 (16%), Positives = 151/412 (36%), Gaps = 88/412 (21%)

Query: 63  NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFV 122
              GG ERVL     AL +K   +++ I +          + +    F  + P   +  +
Sbjct: 10  GNAGGAERVLSNLANALAEK--GHEVTIIS----------LDKGEPPFYELDPKIKVIDL 57

Query: 123 YLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGS 182
              R   + A       L            + L + +PD+ I  +    T    + +G  
Sbjct: 58  GDKRDSKLLARFKKLRRLR-----------KLLKNNKPDVVISFLTSLLT--FLASLG-- 102

Query: 183 KVACYIHYPTITKEMLTRVARRVIT-HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKY 241
                            ++ + +++ HN+                      LL   + + 
Sbjct: 103 ----------------LKIVKLIVSEHNSP-----------DAYKKRLRRLLLRRLLYRR 135

Query: 242 SDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPE 301
           +D ++V +   E+  +           +  P      ++ +        +I++V +  P+
Sbjct: 136 ADAVVVLTE--EDRALYYKKFNKNVVVIPNPL-PFPPEEPSSDLKS--KRILAVGRLVPQ 190

Query: 302 KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF 361
           K   L + A  ++ +   +  W   KL  +G    E +      ++ L K L LE+ V  
Sbjct: 191 KGFDLLIEAWAKIAKKHPD--W---KLRIVGDG-PEREA-----LEALIKELGLEDRVIL 239

Query: 362 KVNLPYEDMKKEFSEGLIGLHAM---WNEHFGIGIVECMAAGLIMIAHK-SGGPKMDIVI 417
                 +++++ +++    +  +   + E F + ++E MA GL +I+     GP  +I+ 
Sbjct: 240 LG--FTKNIEEYYAKA--SIFVLTSRF-EGFPMVLLEAMAFGLPVISFDCPTGPS-EIIE 293

Query: 418 EDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME 467
           +      NG L    D    A+ +  ++   ++ + R+  NA  S +RFS+E
Sbjct: 294 DG----VNGLLVPNGDVEALAEALLRLME-DEELRKRMGANARESAERFSIE 340

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 56/323 (17%), Positives = 89/323 (27%), Gaps = 66/323 (20%)

Query: 101 EIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQP 160
            ++K   +   ++LP      +   R         P   L G            LL    
Sbjct: 27  ALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLLLLLLGL 86

Query: 161 DIYIDTMGYAFTYPLFSYIGGSKVACYIH--YPTITKEMLTRVARRVITHNNSQRVANNP 218
           D+       A    L     G  V   IH   P    E                      
Sbjct: 87  DLLHSPHNTAPLLRLR----GVPVVVTIHDLIPLRFPE---------------------- 120

Query: 219 ILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCD--- 274
               F   + + F  L     + +D I+  S  T+  +++       K   +    D   
Sbjct: 121 ---YFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRF 177

Query: 275 ----TEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF 330
                E            P   + V    P K+    L A  +L          + KL+ 
Sbjct: 178 RPPPAEAEVLRALYLLPRPY-FLYVGTIEPRKNLERLLEAFARLP-----AKGPDPKLVI 231

Query: 331 IGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGL--HAM---- 384
           +G      +E+         + L L + V F   +  E+        L  L   A     
Sbjct: 232 VGKRGWLNEEL-----LARLRELGLGDRVRFLGYVSDEE--------LAALYRGARAFVF 278

Query: 385 --WNEHFGIGIVECMAAGLIMIA 405
               E FG+ ++E MA G  +IA
Sbjct: 279 PSLYEGFGLPVLEAMACGTPVIA 301

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 49/254 (19%), Positives = 94/254 (37%), Gaps = 41/254 (16%)

Query: 229 KVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTE-------DLKKI 281
           +++ LL     +++D ++  +    E    L         +     T        DL + 
Sbjct: 126 RLYLLLERLALRFTDKVIFQN----EDDRDL----ALKLGIIKKKKTVLIPGSGVDLDRF 177

Query: 282 THSKT---DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEE 338
           + S     +     + VA+   +K     L A   L+         N++L+ +G    +E
Sbjct: 178 SPSPEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAK-----GPNVRLLLVGDG--DE 230

Query: 339 DEVCVKDMQDLCKHLSLENNVEFKVNLPY-EDMKKEFSEGLIGLHAMWNEHFGIGIVECM 397
           +           + L LE  VEF   L + +D+ +  +   + +   + E     ++E M
Sbjct: 231 EN---PAAILEIEKLGLEGRVEF---LGFRDDVPELLAAADVFVLPSYREGLPRVLLEAM 284

Query: 398 AAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQ 455
           A G  +IA    G + + VI+      NGFL    D    A  I+ ++    + + R+ Q
Sbjct: 285 AMGRPVIATDVPGCR-EAVIDG----VNGFLVPPGDAEALADAIERLIE-DPELRARMGQ 338

Query: 456 NAVSSV-DRFSMEE 468
            A     + F  E 
Sbjct: 339 AARKRAEEEFDEEI 352

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

 Score = 49.1 bits (118), Expect = 2e-06
 Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 45/280 (16%)

Query: 198 LTRVARRVIT-HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEE-- 254
           + + A+ V+  H+N     N+P+ +    FY  VF     ++ K   +I+     TE+  
Sbjct: 118 MKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVF----ENLDKVDGVIVA----TEQQK 169

Query: 255 HVIQLWNCQLKTYKLYPPCDT------EDLKKITHSKTDGPVKIISVAQFRPEKDHPLQL 308
             +Q      K +  Y P  T      + LK     K   P KII+VA+  PEK     +
Sbjct: 170 QDLQ------KQFGNYNPIYTIPVGSIDPLKLPAQFKQRKPHKIITVARLAPEKQLDQLI 223

Query: 309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE 368
           +A  ++ + + +       L   G   +EE++     +++L + L LE+ V  K      
Sbjct: 224 KAFAKVVKQVPD-----ATLDIYGYG-DEEEK-----LKELIEELGLEDYVFLKGYTR-- 270

Query: 369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSG-GPKMDIVIEDPETCRNGF 427
           D+ + + +  + L    +E FG+ ++E ++ GL +I++    GP  +I IED E   NG+
Sbjct: 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGP-SEI-IEDGE---NGY 325

Query: 428 LA--CDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFS 465
           L    D    A+ I  +L+  +  + + S+ A  + +R+S
Sbjct: 326 LVPKGDIEALAEAIIELLNDPKLLQ-KFSEAAYENAERYS 364

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 52/177 (29%)

Query: 289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS--TRNEEDEVCVKDM 346
           P +I+ V +F  +K   L L A  +L +         ++L+ IG               +
Sbjct: 188 PPRILFVGRFVEKKGPLLLLEAFARLAR-----RVPEVRLVIIGDGPLLAA--------L 234

Query: 347 QDLCKHLSLENNVEFKVNLPYEDMKKEF-----------------SEGLIGLHAMWNEHF 389
           + L + L L   V F    P+ ++++                   +EGL           
Sbjct: 235 EALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGL----------- 283

Query: 390 GIGIVECMAAGLIMIAHKSGG-PKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLIL 443
            + ++E  A+G+ ++A + GG P+    +ED ET   G L    D    A  +  +L
Sbjct: 284 PVVLLEAQASGVPVVATRHGGIPE---AVEDGET---GLLVPEGDVAALAAALGRLL 334

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 44.2 bits (105), Expect = 9e-05
 Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 35/219 (15%)

Query: 263 QLKTYKLYPPCDTEDLKKITHSK---------TDGPVKIISVAQFRPEKDHPLQLRAMYQ 313
             K++ +Y   DT+  +K    +          +    I++V +    KD+P  L+A  +
Sbjct: 153 ANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAK 212

Query: 314 LRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL-PYEDMKK 372
           L          ++KL+  G             ++ L K L L N V+    L   +D+  
Sbjct: 213 LLSDYL-----DIKLLIAGD--GPLR----ATLERLIKALGLSNRVKL---LGLRDDIAA 258

Query: 373 EFSEG-LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL-AC 430
            ++   L  L + W E FG+ + E MA  L ++A  +GG +   V+ D     +G +   
Sbjct: 259 YYNAADLFVLSSAW-EGFGLVVAEAMACELPVVATDAGGVRE--VVGD-----SGLIVPI 310

Query: 431 DEVE-YAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEE 468
            + E  A  I  IL +S + +  I       V +FS+  
Sbjct: 311 SDPEALANKIDEILKMSGEERDIIGARRERIVKKFSINS 349

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 43.0 bits (102), Expect = 2e-04
 Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 27/181 (14%)

Query: 292 IISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK 351
           I  VA+  P+KDH   LRA   L +        N +L+ +G      D     +++ L  
Sbjct: 196 IGIVARLHPQKDHATLLRAAALLLKKFP-----NARLLLVG------DGPDRANLELLAL 244

Query: 352 H-LSLENNVEFKVNL-PYEDMKKEFSEGL-IGLHAMWNEHFGIGIVECMAAGLIMIAHKS 408
             L LE+ V     L    D+       L + + +  +E F   ++E MA GL ++A   
Sbjct: 245 KELGLEDKVIL---LGERSDV-PALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDV 300

Query: 409 GGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSM 466
           G    ++V +       GFL    D    A+ I+ +L      +           + FS+
Sbjct: 301 GDNA-ELVGD------TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSI 353

Query: 467 E 467
           E
Sbjct: 354 E 354

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 43/226 (19%), Positives = 87/226 (38%), Gaps = 28/226 (12%)

Query: 242 SDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRP 300
           +D ++  S +  + +I+L  C   K + ++   D E            P++I+SV +   
Sbjct: 131 ADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLRILSVGRLVE 190

Query: 301 EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE 360
           +K     L A+  L+         + +L  +G     +      +++ L   L LE+ V 
Sbjct: 191 KKGLDYLLEALALLKDR-----GIDFRLDIVGDGPLRD------ELEALIAELGLEDRVT 239

Query: 361 FKVNLPYEDMKKEFSEG----LIGLHAMWNEHFGIGIV--ECMAAGLIMIAHKSGG-PKM 413
                  E++++         L  + A   +  G+ +V  E MA GL +I+    G P  
Sbjct: 240 LLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIP-- 297

Query: 414 DIVIEDPETCRNGFLA--CDEVEYAQTIKLILHLSQDTKTRISQNA 457
           ++V +       G L    D    A  I+ +L   +  +  + +  
Sbjct: 298 ELVEDG----ETGLLVPPGDPEALADAIERLLDDPELRR-EMGEAG 338

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 46/212 (21%)

Query: 270 YPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI 329
           Y   +   LK+   +  D  V +I ++ FRP K     +    +++Q +        KL+
Sbjct: 181 YRRKNDPALKRKLGAPEDEKV-LIHISNFRPVKRVEDVIEVFARVQQEVPA------KLL 233

Query: 330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF--KVN-----LPYEDMKKEFSEGLIGLH 382
            +G    +  E      + L + L L + V F  K +     L   D+    SE      
Sbjct: 234 LVG----DGPERS--PAEQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSE------ 281

Query: 383 AMWNEHFGIGIVECMAAGLIMIAHKSGG-PKMDIVIEDPETCRNGFLA----CDEV-EYA 436
               E FG+  +E MA G+ +IA  +GG P+   V+E   T   GFL      + + EYA
Sbjct: 282 ---KESFGLAALEAMACGVPVIASNAGGIPE---VVEHGVT---GFLCDVGDVETMAEYA 332

Query: 437 QTIKLILHLSQDTKTRISQNAVSSV-DRFSME 467
            +   +L   ++   R S  A     +RF  E
Sbjct: 333 IS---LLE-DEELLQRFSAAARERAKERFDSE 360

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 30/169 (17%)

Query: 308 LRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY 367
           L A   L+         +++ + +G      D    +++++L K L L +NV F   +P 
Sbjct: 239 LEAAALLKDR------PDIRFLIVG------DGPEKEELKELAKALGL-DNVTFLGRVPK 285

Query: 368 EDMKKEFSEGLIGLHAMWNEHFGIGIV-----ECMAAGLIMIAHKSGGPKMDIVIEDPET 422
           E++ +  +   +GL  +       G+      E MAAG  ++A  S   +   ++E+   
Sbjct: 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLA--SVDGESAELVEEAGA 343

Query: 423 CRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEF 469
              G +    D    A  I  +L    + +  + +N      R+  E+F
Sbjct: 344 ---GLVVPPGDPEALAAAILELL-DDPEERAEMGENGR----RYVEEKF 384

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	488
PLN02949	463	transferase, transferring glycosyl groups	100.0
KOG1387|consensus	465		100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
PLN02316	1036	synthase/transferase	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
KOG1111|consensus	426		100.0
PLN02275	371	transferase, transferring glycosyl groups	99.97
cd04946	407	GT1_AmsK_like This family is most closely related	99.97
cd04949	372	GT1_gtfA_like This family is most closely related	99.97
PLN02501	794	digalactosyldiacylglycerol synthase	99.97
PHA01630	331	putative group 1 glycosyl transferase	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.96
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.95
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.95
KOG0853|consensus	495		99.95
PHA01633	335	putative glycosyl transferase group 1	99.95
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.94
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.94
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.94
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.93
PLN02605	382	monogalactosyldiacylglycerol synthase	99.93
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.92
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.92
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.91
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.91
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.9
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.88
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.88
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.88
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.87
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.87
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.87
KOG2941|consensus	444		99.84
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.84
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.81
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.81
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.8
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.76
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.75
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.69
TIGR03492	396	conserved hypothetical protein. This protein famil	99.65
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.61
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.6
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.59
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.56
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.54
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	99.54
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.53
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.5
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.47
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.4
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.35
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.33
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.31
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	99.29
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.28
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.28
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.27
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.26
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.24
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.21
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.18
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	99.14
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.08
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.06
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.01
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.97
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	98.95
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.89
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	98.87
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	98.77
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.76
COG4671	400	Predicted glycosyl transferase [General function p	98.73
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	98.72
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	98.62
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.6
PLN02448	459	UDP-glycosyltransferase family protein	98.6
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.6
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	98.54
PLN03007	482	UDP-glucosyltransferase family protein	98.43
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.37
KOG3742|consensus	692		98.35
KOG4626|consensus	966		98.34
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.34
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	98.23
PLN02764	453	glycosyltransferase family protein	98.21
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	98.17
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	98.16
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.09
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	98.03
PLN02208	442	glycosyltransferase family protein	98.01
PLN02670	472	transferase, transferring glycosyl groups	98.01
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	97.95
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	97.94
PLN02210	456	UDP-glucosyl transferase	97.94
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.89
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	97.84
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	97.81
PLN02562	448	UDP-glycosyltransferase	97.76
PLN02173	449	UDP-glucosyl transferase family protein	97.74
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.68
PLN02554	481	UDP-glycosyltransferase family protein	97.68
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	97.61
PLN02992	481	coniferyl-alcohol glucosyltransferase	97.57
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	97.51
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	97.33
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.32
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.31
PLN02207	468	UDP-glycosyltransferase	97.28
PLN00164	480	glucosyltransferase; Provisional	97.23
PLN00414	446	glycosyltransferase family protein	97.16
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	97.13
PLN02534	491	UDP-glycosyltransferase	96.93
KOG1050|consensus	732		96.92
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	96.92
PLN02167	475	UDP-glycosyltransferase family protein	96.76
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	96.74
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	96.7
PLN03004	451	UDP-glycosyltransferase	96.67
PLN02555	480	limonoid glucosyltransferase	96.65
PLN03015	470	UDP-glucosyl transferase	96.65
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	96.52
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	96.45
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	96.4
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	96.39
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	96.26
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	96.18
PRK14986	815	glycogen phosphorylase; Provisional	96.18
PLN02152	455	indole-3-acetate beta-glucosyltransferase	96.16
PRK14985	798	maltodextrin phosphorylase; Provisional	95.96
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.9
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	95.56
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	95.51
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	95.45
KOG1192|consensus	496		94.78
KOG0780|consensus	483		94.63
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	94.62
COG4370	412	Uncharacterized protein conserved in bacteria [Fun	93.67
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	92.86
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	92.83
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	90.31
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	90.08
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	86.59
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	83.63
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	83.29
KOG3339|consensus	211		82.79
KOG1021|consensus	464		82.57
KOG3349|consensus	170		82.51
PF00389	133	2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydr	82.21
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	81.14
PF06692	61	MNSV_P7B: Melon necrotic spot virus P7B protein; I	80.83
COG3340	224	PepE Peptidase E [Amino acid transport and metabol	80.51
PF04392	294	ABC_sub_bind: ABC transporter substrate binding pr	80.36

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=1.5e-60  Score=466.39  Aligned_cols=429  Identities=44%  Similarity=0.767  Sum_probs=379.5

Q ss_pred             cccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee
Q psy15555         51 VLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        51 ~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      ++++|+|+||+++.+||+||+++..+.+|.+.+++++|+++|++.+...+++..+..+.|++.++.+ +.++++....|+
T Consensus        32 ~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~-~~~v~l~~~~~~  110 (463)
T PLN02949         32 RKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSP-PKVVHLRKRKWI  110 (463)
T ss_pred             CCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCC-ceEEEecccccc
Confidence            3579999999999999999999999999999999999999999877777777777777899888877 788888778899


Q ss_pred             eccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                      .+..+++++.+++++++++..++.+.+..||++++|.++++.+|+++ ..+.|++.|+|+|..+.||...+..+...+++
T Consensus       111 ~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~-~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~  189 (463)
T PLN02949        111 EEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLAR-LFGCKVVCYTHYPTISSDMISRVRDRSSMYNN  189 (463)
T ss_pred             ccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHH-hcCCcEEEEEeCCcchHHHHHHHhhcccccCc
Confidence            99999999999999999999999888888999999999999999988 66899999999999999999999999999999


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCe
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPV  290 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~  290 (488)
                      ...+..+...+..+..|++.+.++++...+.+|.++++|+++++.+.+.++.+.++.+++||+|.+.+.........++.
T Consensus       190 ~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~~~~~~~  269 (463)
T PLN02949        190 DASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLERSEDPP  269 (463)
T ss_pred             cchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCccccCCCC
Confidence            88888887778888999999999999999999999999999999999988766688999999987665332222223457


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      .++++||+.++||++.+++|++++.++.+ ...++++|+|+|+++..++.++.++++++++++++.++|+|+|+++.+|+
T Consensus       270 ~il~vGR~~~~Kg~~llI~A~~~l~~~~~-~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el  348 (463)
T PLN02949        270 YIISVAQFRPEKAHALQLEAFALALEKLD-ADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDL  348 (463)
T ss_pred             EEEEEEeeeccCCHHHHHHHHHHHHHhcc-ccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHH
Confidence            89999999999999999999999876421 00168999999999766666788999999999999999999999999999


Q ss_pred             HHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHH
Q psy15555        371 KKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTK  450 (488)
Q Consensus       371 ~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~  450 (488)
                      .++|+.||+++.+|..|+||++++|||++|+|||+++.+|+.+|++.+. ..+.+|++++|+++++++|.++++++++.+
T Consensus       349 ~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~-~~g~tG~l~~~~~~la~ai~~ll~~~~~~r  427 (463)
T PLN02949        349 VRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE-DGQQTGFLATTVEEYADAILEVLRMRETER  427 (463)
T ss_pred             HHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC-CCCcccccCCCHHHHHHHHHHHHhCCHHHH
Confidence            9999999999999999999999999999999999999999876888752 122689999999999999999998567889


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhh
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                      ++|+++|++.+++||++.+.+++.+.++++++.
T Consensus       428 ~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~  460 (463)
T PLN02949        428 LEIAAAARKRANRFSEQRFNEDFKDAIRPILNS  460 (463)
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence            999999999998899999999999999998764

>KOG1387|consensus

Probab=100.00  E-value=1.4e-58  Score=404.25  Aligned_cols=426  Identities=45%  Similarity=0.777  Sum_probs=390.6

Q ss_pred             ccccccccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEee
Q psy15555         46 RKSYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLY  125 (488)
Q Consensus        46 ~~~~~~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  125 (488)
                      +...++.+.++|+||+++++||+||++|..++.+++.+|++.+++++++.+.+++++..++++.|++.+++..+.++++.
T Consensus        37 ~~~~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk  116 (465)
T KOG1387|consen   37 NRAEKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLK  116 (465)
T ss_pred             hhhhhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEE
Confidence            33445567899999999999999999999999999999999999999999999999999999999999997669999999


Q ss_pred             ccceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhh
Q psy15555        126 RRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRV  205 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~  205 (488)
                      .+.++....|++++.++|+++++......+-++.|||.|++.++|+.+|+++..+++|++.|+|+|.+++||+..+..+.
T Consensus       117 ~R~lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq  196 (465)
T KOG1387|consen  117 LRYLVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQ  196 (465)
T ss_pred             eeeeeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999998999999999999999999999998875


Q ss_pred             hcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCC
Q psy15555        206 ITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSK  285 (488)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~  285 (488)
                                .+......+..||+.|..+++.+.++||.++++|.++.+.+.+.+.. .+..+++||++.+.........
T Consensus       197 ----------~s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~-~~~~iVyPPC~~e~lks~~~te  265 (465)
T KOG1387|consen  197 ----------KSGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS-NTCSIVYPPCSTEDLKSKFGTE  265 (465)
T ss_pred             ----------hcchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc-cceeEEcCCCCHHHHHHHhccc
Confidence                      23467788889999999999999999999999999999999999987 5789999999988766555444


Q ss_pred             CCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhh-ccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEE-LWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~-~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      .++.+.++++|.+.|+|+.. +|+.++....+.+++ .+++++|+++|+++.++|++|.+.++++++++.++.+|.|.-.
T Consensus       266 ~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N  344 (465)
T KOG1387|consen  266 GERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKN  344 (465)
T ss_pred             CCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEec
Confidence            56778999999999999999 666666555554432 3468999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHc
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILH  444 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~  444 (488)
                      +|.+++..+|+.|.+.|.+.+.|+||+.++|+||+|+-+|+.+++|+..||+.+. .++.+|++.++.+|.++++.++..
T Consensus       345 ~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~-~G~~tGFla~t~~EYaE~iLkIv~  423 (465)
T KOG1387|consen  345 VPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPW-DGETTGFLAPTDEEYAEAILKIVK  423 (465)
T ss_pred             CCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeecc-CCccceeecCChHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998 777899999999999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        445 LSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       445 ~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ++++++..|+++||..+.+|+...+-+.|.+.+.+++.+.
T Consensus       424 ~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e~  463 (465)
T KOG1387|consen  424 LNYDERNMMRRNARKSLARFGELKFDKDWENPICKLLEEE  463 (465)
T ss_pred             cCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhccc
Confidence            8999999999999999999999999999999999988653

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.6e-54  Score=424.16  Aligned_cols=413  Identities=54%  Similarity=0.955  Sum_probs=358.0

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEee-ccceeec
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLY-RRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~  132 (488)
                      .|+|+||+++.+||+||+++..+.+|.+.+++++|+++|++.+.......++....|.+...++ +.++.+. ...+..+
T Consensus         2 ~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~-~~~~~~~~~~~~~~~   80 (419)
T cd03806           2 TVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRP-RIVFFLLKYRKLVEA   80 (419)
T ss_pred             eEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCC-ceEEEEecceeeecc
Confidence            5899999999999999999999999999989999999999988766677778888898888777 8776664 6677888


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~  212 (488)
                      ..+++++.+++++.......+.+...+|||++++.+|+..+++++...++|++.|+|+|....|+...+......++|..
T Consensus        81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~  160 (419)
T cd03806          81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSA  160 (419)
T ss_pred             ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCcc
Confidence            89999999999998888787777677999999999999999988877789999999999998899988888888888888


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEE
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI  292 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i  292 (488)
                      .+..+...+..+..|++.+.++++...+.+|.++++|+++++.+.+.++...++.+++||+|.+.+.+.......+++++
T Consensus       161 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~i  240 (419)
T cd03806         161 TIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQI  240 (419)
T ss_pred             chhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEE
Confidence            88888877888999999999999999999999999999999999998776558999999999877654432223456899


Q ss_pred             EEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHH
Q psy15555        293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       293 ~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~  372 (488)
                      +|+|++.++||++.+++|++++.++.++...++++|+|+|+++..++.++.++++++++++++.++|+|+|.+|.+++..
T Consensus       241 l~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~  320 (419)
T cd03806         241 LSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLE  320 (419)
T ss_pred             EEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHH
Confidence            99999999999999999999998876210012599999999877666678899999999999999999999999999999


Q ss_pred             HHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceec---cCCCccccceecCCHHHHHHHHHHHHccCHHH
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI---EDPETCRNGFLACDEVEYAQTIKLILHLSQDT  449 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~---~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~  449 (488)
                      +|+.||+++.+|..|+||++++|||++|+|||+++.+|+.++++.   ++    .+|++++|+++++++|.++++++++.
T Consensus       321 ~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g----~~G~l~~d~~~la~ai~~ll~~~~~~  396 (419)
T cd03806         321 ELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGG----PTGFLASTAEEYAEAIEKILSLSEEE  396 (419)
T ss_pred             HHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCC----CceEEeCCHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999999999999999887668988   66    89999999999999999999844455


Q ss_pred             HHHHHHHHHHHHhhcCHHHHHH
Q psy15555        450 KTRISQNAVSSVDRFSMEEFKN  471 (488)
Q Consensus       450 ~~~~~~~a~~~~~~~s~~~~~~  471 (488)
                      ++.+++++++..++||++.+.+
T Consensus       397 ~~~~~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         397 RLRIRRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHHHHhhCHHHhcc
Confidence            5556555555449999998753

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.7e-42  Score=312.34  Aligned_cols=343  Identities=17%  Similarity=0.124  Sum_probs=279.2

Q ss_pred             EEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccC
Q psy15555         55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASL  134 (488)
Q Consensus        55 I~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  134 (488)
                      ..|+|..+.   |+.+.+.+|+++|++++|++.++++|.++++  .+...   ..++    +. +.+.|+|+|..     
T Consensus        51 ~vWiHaaSV---GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg--~e~a~---~~~~----~~-v~h~YlP~D~~-----  112 (419)
T COG1519          51 LVWIHAASV---GEVLAALPLVRALRERFPDLRILVTTMTPTG--AERAA---ALFG----DS-VIHQYLPLDLP-----  112 (419)
T ss_pred             eEEEEecch---hHHHHHHHHHHHHHHhCCCCCEEEEecCccH--HHHHH---HHcC----CC-eEEEecCcCch-----
Confidence            445554443   6779999999999999999999999988654  22222   2232    44 78899999887     


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCc--EEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcc
Q psy15555        135 YPYFTLLGQSIGSMILGVEALLSFQPD--IYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~l~~~~pD--iii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~  212 (488)
                                    ..+++++++++||  |+++++.||+++..++ ..++|.++                          
T Consensus       113 --------------~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~-~~~~p~~L--------------------------  151 (419)
T COG1519         113 --------------IAVRRFLRKWRPKLLIIMETELWPNLINELK-RRGIPLVL--------------------------  151 (419)
T ss_pred             --------------HHHHHHHHhcCCCEEEEEeccccHHHHHHHH-HcCCCEEE--------------------------
Confidence                          5688999999999  4569999999998887 88999998                          


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhh-------hccCCC
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDL-------KKITHS  284 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~-------~~~~~~  284 (488)
                         .|+++|..+...|+.+..+.+.+++..|.|++||+.++++|.+++..+  +.+..|- +|.+..       ......
T Consensus       152 ---vNaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~  226 (419)
T COG1519         152 ---VNARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQ  226 (419)
T ss_pred             ---EeeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCcc--eEEecceeecCCCChhhHHHHHHHHHh
Confidence               788999999999999999999999999999999999999999977644  6777764 433222       112223


Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC--------
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE--------  356 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------  356 (488)
                      ....+++++++|++.  ++.+.++++++.+++++     |+..+++|++||     |+++++++++++.|+.        
T Consensus       227 l~~~r~v~iaaSTH~--GEeei~l~~~~~l~~~~-----~~~llIlVPRHp-----ERf~~v~~l~~~~gl~~~~rS~~~  294 (419)
T COG1519         227 LGGHRPVWVAASTHE--GEEEIILDAHQALKKQF-----PNLLLILVPRHP-----ERFKAVENLLKRKGLSVTRRSQGD  294 (419)
T ss_pred             cCCCCceEEEecCCC--chHHHHHHHHHHHHhhC-----CCceEEEecCCh-----hhHHHHHHHHHHcCCeEEeecCCC
Confidence            333488999999854  44557899999999998     899999999999     9999999999999883        


Q ss_pred             -----CcEEEecCCChHHHHHHHHhCc-EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC
Q psy15555        357 -----NNVEFKVNLPYEDMKKEFSEGL-IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC  430 (488)
Q Consensus       357 -----~~v~~~g~~~~~el~~~~~~ad-~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~  430 (488)
                           .+|.+.+.+  +||..+|+.|| +||++|..+.+|||++||+++|+|||++++..++.|+.+.. .+.+.++.++
T Consensus       295 ~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~  371 (419)
T COG1519         295 PPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE  371 (419)
T ss_pred             CCCCCCcEEEEecH--hHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC
Confidence                 367777777  99999999999 89999999999999999999999999999977776776665 4456788899


Q ss_pred             CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        431 DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       431 ~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      |.+.+++++..+++ |++.+.++++++...+..  .+...++.++.+++
T Consensus       372 ~~~~l~~~v~~l~~-~~~~r~~~~~~~~~~v~~--~~gal~r~l~~l~~  417 (419)
T COG1519         372 DADLLAKAVELLLA-DEDKREAYGRAGLEFLAQ--NRGALARTLEALKP  417 (419)
T ss_pred             CHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH--hhHHHHHHHHHhhh
Confidence            98888888888888 899999999999988843  24456666666654

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.9e-39  Score=318.08  Aligned_cols=366  Identities=15%  Similarity=0.150  Sum_probs=269.0

Q ss_pred             EEEEeccC-CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPY-CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~-~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++.+. .+..||.++.+..++++|.++|  ++|++++...+......          ..... +.+..++.......
T Consensus         1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~~----------~~~~~-i~v~~~p~~~~~~~   67 (398)
T cd03796           1 RICMVSDFFYPNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRVGIR----------YLTNG-LKVYYLPFVVFYNQ   67 (398)
T ss_pred             CeeEEeeccccccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCCCcc----------cccCc-eeEEEecceeccCC
Confidence            67887764 4467889999999999999995  55566655422111000          00122 44544443322111


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh---hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP---LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~---~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                      .....      .+.....+.+.+++.+|||||.+..++....   .+....++|++...|......              
T Consensus        68 ~~~~~------~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~--------------  127 (398)
T cd03796          68 STLPT------FFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFA--------------  127 (398)
T ss_pred             ccccc------hhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEeccccccc--------------
Confidence            11111      1112234556777889999998875544321   222356789888887432000              


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-cCCceEEEcCCCCchhhhccCCCCCCC
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-CQLKTYKLYPPCDTEDLKKITHSKTDG  288 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~k~~vi~~~~d~~~~~~~~~~~~~~  288 (488)
                                  ...   .....++.++..+++|.++++|+...+.+....+ .++++.++||++|.+.+.+......++
T Consensus       128 ------------~~~---~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~  192 (398)
T cd03796         128 ------------DAS---SIHTNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDND  192 (398)
T ss_pred             ------------chh---hHHhhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCC
Confidence                        000   0111224456678999999999999886643333 345899999999988876654333457


Q ss_pred             CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChH
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE  368 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~  368 (488)
                      +++++++|++.++||++.+++|++.+.++.     ++++++++|.++..      ++++++++++++.++|.+.|.++.+
T Consensus       193 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~-----~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~~~G~~~~~  261 (398)
T cd03796         193 KITIVVISRLVYRKGIDLLVGIIPEICKKH-----PNVRFIIGGDGPKR------ILLEEMREKYNLQDRVELLGAVPHE  261 (398)
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHHHhhC-----CCEEEEEEeCCchH------HHHHHHHHHhCCCCeEEEeCCCCHH
Confidence            789999999999999999999999998777     89999999998632      7789999999999999999999999


Q ss_pred             HHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHH
Q psy15555        369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       369 el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~  448 (488)
                      ++..+|+.||+++.||..|++|++++|||+||+|||+++.++.. |++.++    ..++..+|.+++++++.++++ +..
T Consensus       262 ~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~-e~i~~~----~~~~~~~~~~~l~~~l~~~l~-~~~  335 (398)
T cd03796         262 RVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIP-EVLPPD----MILLAEPDVESIVRKLEEAIS-ILR  335 (398)
T ss_pred             HHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCch-hheeCC----ceeecCCCHHHHHHHHHHHHh-Chh
Confidence            99999999999999999999999999999999999999999986 888776    433334499999999999998 776


Q ss_pred             HHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        449 TKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       449 ~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ....+++++++.+ ++|||+.+++++.++|++++...
T Consensus       336 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~~  372 (398)
T cd03796         336 TGKHDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQTP  372 (398)
T ss_pred             hhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence            6667788888877 99999999999999999988643

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.9e-39  Score=316.46  Aligned_cols=376  Identities=26%  Similarity=0.376  Sum_probs=274.2

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||+|++++.. .||+|+++..++++|.++|  ++|.++|...+...  ....        ....++.+.....  +...
T Consensus         1 mkIl~~~~~~~-~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~--~~~~--------~~~~~~~i~~~~~--~~~~   65 (392)
T cd03805           1 LRVAFIHPDLG-IGGAERLVVDAALALQSRG--HEVTIYTSHHDPSH--CFEE--------TKDGTLPVRVRGD--WLPR   65 (392)
T ss_pred             CeEEEECCCCC-CchHHHHHHHHHHHHHhCC--CeEEEEcCCCCchh--cchh--------ccCCeeEEEEEeE--EEcc
Confidence            79999999876 5679999999999999995  55555554322110  0000        0011022222111  1222


Q ss_pred             cCchhHHHHHHHHHHHHHHH--HHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGV--EALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~--~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                      ..+.++..+...+.......  ...+..++|+||.+.. ....+......+.|++.++|.|....               
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~-~~~~~~~~~~~~~~~i~~~h~~~~~~---------------  129 (392)
T cd03805          66 SIFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQV-SACVPLLKLFSPSKILFYCHFPDQLL---------------  129 (392)
T ss_pred             hhhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCc-chHHHHHHHhcCCcEEEEEecChHHh---------------
Confidence            22333222323333222222  1356679999986642 33334444344588999999764211               


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-C-ceEEEcCCCCchhhhccCC-----
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-L-KTYKLYPPCDTEDLKKITH-----  283 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~-k~~vi~~~~d~~~~~~~~~-----  283 (488)
                            ....+..+..+...+.++++..++.+|.++++|+.+++.+.+.++.. . ++.+++|++|.+.+.+...     
T Consensus       130 ------~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~  203 (392)
T cd03805         130 ------AQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPG  203 (392)
T ss_pred             ------cCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccccc
Confidence                  00122333445556677888899999999999999999998866532 2 3459999999887754322     


Q ss_pred             --CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC--CcHHHHHHHHHHHHh-cCCCCc
Q psy15555        284 --SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE--EDEVCVKDMQDLCKH-LSLENN  358 (488)
Q Consensus       284 --~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~--~~~~~~~~l~~~~~~-~~l~~~  358 (488)
                        ...++.++++++|++.+.||++.+++|+.++.++..  ..++++|+++|+++..  ++.++.+++++.+++ .++.++
T Consensus       204 ~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~--~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~  281 (392)
T cd03805         204 LLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLA--EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQ  281 (392)
T ss_pred             ccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcc--cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCce
Confidence              133567899999999999999999999999987630  0048999999988643  233566889999999 999999


Q ss_pred             EEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHH
Q psy15555        359 VEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQ  437 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~  437 (488)
                      |.|.|+++.+++..+|+.||+++.+|..|++|++++|||++|+|||+++.++.. |++.++    .+|++++ |++++++
T Consensus       282 V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~-e~i~~~----~~g~~~~~~~~~~a~  356 (392)
T cd03805         282 VIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPL-ETVVDG----ETGFLCEPTPEEFAE  356 (392)
T ss_pred             EEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcH-HHhccC----CceEEeCCCHHHHHH
Confidence            999999999999999999999999999999999999999999999999999986 888887    7899886 9999999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGF  473 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~  473 (488)
                      +|.++++ +++.++++++++++.+ ++|||+.+++++
T Consensus       357 ~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~  392 (392)
T cd03805         357 AMLKLAN-DPDLADRMGAAGRKRVKEKFSTEAFAERL  392 (392)
T ss_pred             HHHHHHh-ChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence            9999999 9999999999999998 999999998764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=2.3e-38  Score=312.16  Aligned_cols=387  Identities=12%  Similarity=0.050  Sum_probs=268.4

Q ss_pred             cEEEEeccC-CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhh-hhcccccCCCeeEEEEeecccee
Q psy15555         53 KTVAFFHPY-CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAH-QRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        53 ~rI~~~~~~-~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      |||++++.. .+..||.+..+..++++|.++  |++|.++|..+............ ..+....... +++.+++.....
T Consensus         1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~--G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~r~~~~~~~   77 (412)
T PRK10307          1 MKILVYGINYAPELTGIGKYTGEMAEWLAAR--GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGG-VTVWRCPLYVPK   77 (412)
T ss_pred             CeEEEEecCCCCCccchhhhHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCcccccccceeeecCC-eEEEEccccCCC
Confidence            799998754 456678899999999999998  55555655543221100000000 0001111123 666655542221


Q ss_pred             eccCchhH-HHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh---hhhhhCCCeeEEEEeCCccchHHHHHHHhhhh
Q psy15555        131 EASLYPYF-TLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP---LFSYIGGSKVACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       131 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~---~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                      ......+. ......+.......+.++ .+||+||.+.+.....+   .++...++|+++.+|...  .+..   ..   
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~--~~~~---~~---  148 (412)
T PRK10307         78 QPSGLKRLLHLGSFALSSFFPLLAQRR-WRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYE--VDAA---FG---  148 (412)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhhccC-CCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCC--HHHH---HH---
Confidence            11111111 111111222222222222 78999998764332222   233356788887776422  1110   00   


Q ss_pred             cccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC--
Q psy15555        207 THNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS--  284 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~--  284 (488)
                               .. ..  ......+....+++.+++++|.++++|+.+++.+.+.+..+.++.+++|++|.+.+.+....  
T Consensus       149 ---------~~-~~--~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~  216 (412)
T PRK10307        149 ---------LG-LL--KGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADADV  216 (412)
T ss_pred             ---------hC-Cc--cCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccch
Confidence                     00 00  11122344556778888999999999999999998865555689999999998776543211  


Q ss_pred             --------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        285 --------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       285 --------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                              ..+++++++|+|++.+.||++.+++|++.+.+ .     ++++|+|+|+|+..      ++++++++++++.
T Consensus       217 ~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~~-~-----~~~~l~ivG~g~~~------~~l~~~~~~~~l~  284 (412)
T PRK10307        217 DALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLRD-R-----PDLIFVICGQGGGK------ARLEKMAQCRGLP  284 (412)
T ss_pred             HHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhcc-C-----CCeEEEEECCChhH------HHHHHHHHHcCCC
Confidence                    12456899999999999999999999998854 3     78999999999643      7888899999986


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcC----CccHHHHHHcCCcEEEeCCCCC-ccceeccCCCccccceecC-
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF----GIGIVECMAAGLIMIAHKSGGP-KMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~----g~~~lEa~a~G~PvI~~~~~~~-~~eiv~~~~~~~~~g~~~~-  430 (488)
                       +|.|+|+++.+++..+|+.||+++.||..|++    |.+++|||++|+|||+++.+|. ..+++. .     +|++++ 
T Consensus       285 -~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~-~-----~G~~~~~  357 (412)
T PRK10307        285 -NVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE-G-----IGVCVEP  357 (412)
T ss_pred             -ceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh-C-----CcEEeCC
Confidence             79999999999999999999999999988874    5668999999999999998763 236665 3     688875 


Q ss_pred             -CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhh
Q psy15555        431 -DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       431 -~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                       |+++++++|.++++ |++.+.+|+++|++.+ ++|||+.+++++.++|++++.+
T Consensus       358 ~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~  411 (412)
T PRK10307        358 ESVEALVAAIAALAR-QALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE  411 (412)
T ss_pred             CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence             99999999999999 9999999999999999 7899999999999999998864

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=4.7e-38  Score=306.67  Aligned_cols=284  Identities=19%  Similarity=0.232  Sum_probs=229.5

Q ss_pred             HHHhhhcCCcEEEecCCccchhh-hhhh--hCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHH
Q psy15555        152 VEALLSFQPDIYIDTMGYAFTYP-LFSY--IGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYY  228 (488)
Q Consensus       152 ~~~l~~~~pDiii~~~~~~~~~~-~~~~--~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (488)
                      .+.+++.+||+||.+.+...... .++.  ..+.+++.+.|...+..                         ......+ 
T Consensus       111 ~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~-------------------------~~~~~~~-  164 (406)
T PRK15427        111 AQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS-------------------------REVLNHY-  164 (406)
T ss_pred             hhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc-------------------------chhhhhh-
Confidence            34557789999998764432221 2221  12335677888654211                         0000001 


Q ss_pred             HHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHH
Q psy15555        229 KVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQL  308 (488)
Q Consensus       229 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll  308 (488)
                         ....+..++++|.++++|+..++.+.+.+..++++.+++||+|.+.+.+.......+...++++|++.+.||++.++
T Consensus       165 ---~~~~~~~~~~ad~vv~~S~~~~~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll  241 (406)
T PRK15427        165 ---TPEYQQLFRRGDLMLPISDLWAGRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAI  241 (406)
T ss_pred             ---hHHHHHHHHhCCEEEECCHHHHHHHHHcCCCHHHEEEcCCCCCHHHcCCCccccCCCCeEEEEEeCcchhcCHHHHH
Confidence               11233466789999999999999998864444589999999999887654333334567899999999999999999


Q ss_pred             HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCC--
Q psy15555        309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWN--  386 (488)
Q Consensus       309 ~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~--  386 (488)
                      +|++.+.++.     ++++++|+|.|+.      .+++++.++++|+.++|.|.|+++++|+.++|+.||+++.||..  
T Consensus       242 ~a~~~l~~~~-----~~~~l~ivG~G~~------~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~  310 (406)
T PRK15427        242 EACRQLKEQG-----VAFRYRILGIGPW------ERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGA  310 (406)
T ss_pred             HHHHHHHhhC-----CCEEEEEEECchh------HHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCC
Confidence            9999998876     7999999999963      37899999999999999999999999999999999999999964  


Q ss_pred             ----CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q psy15555        387 ----EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       387 ----e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~  460 (488)
                          |++|++++|||++|+|||+++.+|.. |++.++    .+|++++  |+++++++|.+++++|++.+++|+++|++.
T Consensus       311 ~g~~Eg~p~~llEAma~G~PVI~t~~~g~~-E~v~~~----~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~  385 (406)
T PRK15427        311 DGDMEGIPVALMEAMAVGIPVVSTLHSGIP-ELVEAD----KSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAREK  385 (406)
T ss_pred             CCCccCccHHHHHHHhCCCCEEEeCCCCch-hhhcCC----CceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence                99999999999999999999999997 999988    8999986  999999999999976889999999999999


Q ss_pred             H-hhcCHHHHHHHHHHHHHHh
Q psy15555        461 V-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       461 ~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      + ++|+|+.+++++.++++++
T Consensus       386 v~~~f~~~~~~~~l~~~~~~~  406 (406)
T PRK15427        386 VETDFNQQVINRELASLLQAL  406 (406)
T ss_pred             HHHhcCHHHHHHHHHHHHhhC
Confidence            9 9999999999999998763

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=6.9e-38  Score=305.37  Aligned_cols=359  Identities=17%  Similarity=0.155  Sum_probs=261.2

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      .||+++.+... .||+|+++.+++++|.++++++.++.++.. + .   ..+....       .+ +.+..++....   
T Consensus         2 ~~il~ii~~~~-~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~-~-~---~~~~~~~-------~~-i~~~~~~~~~~---   64 (374)
T TIGR03088         2 PLIVHVVYRFD-VGGLENGLVNLINHLPADRYRHAVVALTEV-S-A---FRKRIQR-------PD-VAFYALHKQPG---   64 (374)
T ss_pred             ceEEEEeCCCC-CCcHHHHHHHHHhhccccccceEEEEcCCC-C-h---hHHHHHh-------cC-ceEEEeCCCCC---
Confidence            47888887775 577999999999999988555444433221 2 1   1111100       12 44444432211   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEE-EeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACY-IHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~-~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ..          +...+.+.+++++.+|||||.+...+.....+.+..+.|..++ .|....    .             
T Consensus        65 ~~----------~~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~----~-------------  117 (374)
T TIGR03088        65 KD----------VAVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDV----F-------------  117 (374)
T ss_pred             CC----------hHHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCccc----c-------------
Confidence            11          1122446678889999999987543322222333445564332 221110    0             


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccCC-------
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKITH-------  283 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~~-------  283 (488)
                              ....+..   ...++.+...+.+|.++++|+.+++.+.+.++.+ .++.+++|++|.+.+.+...       
T Consensus       118 --------~~~~~~~---~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~  186 (374)
T TIGR03088       118 --------DLDGSNW---KYRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILP  186 (374)
T ss_pred             --------cchhhHH---HHHHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhH
Confidence                    0000011   1122333445668999999999999998876643 57899999999877654321       


Q ss_pred             --CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEE
Q psy15555        284 --SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF  361 (488)
Q Consensus       284 --~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~  361 (488)
                        ...+++++++++||+.+.||++.+++|++.+.++.++ ..++++|+++|+|+..      +++++.++++++.+++.+
T Consensus       187 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~-~~~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~  259 (374)
T TIGR03088       187 PDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPE-GAERLRLVIVGDGPAR------GACEQMVRAAGLAHLVWL  259 (374)
T ss_pred             hhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcc-cccceEEEEecCCchH------HHHHHHHHHcCCcceEEE
Confidence              1234678999999999999999999999999876510 0137899999998643      778899999999889999


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTI  439 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i  439 (488)
                      .|..  +|+.++|+.||++++||..|++|++++|||+||+|||+++.++.. |++.++    .+|++++  |++++++++
T Consensus       260 ~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~-e~i~~~----~~g~~~~~~d~~~la~~i  332 (374)
T TIGR03088       260 PGER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNP-ELVQHG----VTGALVPPGDAVALARAL  332 (374)
T ss_pred             cCCc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcH-HHhcCC----CceEEeCCCCHHHHHHHH
Confidence            9976  899999999999999999999999999999999999999999987 999888    8899875  899999999


Q ss_pred             HHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhh
Q psy15555        440 KLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       440 ~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~  481 (488)
                      .++++ +++.+.+++++|++.+ ++|||+.+++++.++|++++
T Consensus       333 ~~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~  374 (374)
T TIGR03088       333 QPYVS-DPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL  374 (374)
T ss_pred             HHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence            99999 9999999999999998 89999999999999998763

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=5.7e-38  Score=312.93  Aligned_cols=360  Identities=14%  Similarity=0.189  Sum_probs=259.6

Q ss_pred             ccccEEEEecc-C-CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEe---
Q psy15555         50 NVLKTVAFFHP-Y-CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYL---  124 (488)
Q Consensus        50 ~~~~rI~~~~~-~-~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---  124 (488)
                      +++|||+++.. . ....||.++.+.+++++|.++  |++|.+++...+... . ..      +       +.+...   
T Consensus        56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~--G~eV~vlt~~~~~~~-~-~~------g-------~~v~~~~~~  118 (465)
T PLN02871         56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM--GDEVLVVTTDEGVPQ-E-FH------G-------AKVIGSWSF  118 (465)
T ss_pred             CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHC--CCeEEEEecCCCCCc-c-cc------C-------ceeeccCCc
Confidence            56899997642 2 234578899999999999998  555666665433211 0 00      0       111110   


Q ss_pred             eccceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHH
Q psy15555        125 YRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVA  202 (488)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~  202 (488)
                      +.+... ...+.        +.....+.+.+++.+||+||.+......+.  .+....++|++...|......     ..
T Consensus       119 ~~~~~~-~~~~~--------~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~-----~~  184 (465)
T PLN02871        119 PCPFYQ-KVPLS--------LALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVY-----IP  184 (465)
T ss_pred             CCccCC-Cceee--------ccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhh-----hh
Confidence            000000 00000        000013556778899999997754322222  222356899998887432100     00


Q ss_pred             hhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhcc
Q psy15555        203 RRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKI  281 (488)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~  281 (488)
                                   ..    ..... .+.+..+.+.+.+.+|.++++|+..++.+.+.+.. ..++.+++|++|.+.+.+.
T Consensus       185 -------------~~----~~~~~-~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~  246 (465)
T PLN02871        185 -------------RY----TFSWL-VKPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPR  246 (465)
T ss_pred             -------------cc----cchhh-HHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCc
Confidence                         00    00011 11112344567788999999999999999986533 4589999999998877543


Q ss_pred             CCC---------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHh
Q psy15555        282 THS---------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH  352 (488)
Q Consensus       282 ~~~---------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~  352 (488)
                      ...         ..+++++++|+|++.++||++.++++++++         ++++|+|+|+|+..      +++++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~---------~~~~l~ivG~G~~~------~~l~~~~~~  311 (465)
T PLN02871        247 FRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL---------PGARLAFVGDGPYR------EELEKMFAG  311 (465)
T ss_pred             cccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC---------CCcEEEEEeCChHH------HHHHHHhcc
Confidence            211         123578899999999999999999988765         68999999998632      667776653


Q ss_pred             cCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceecc---CCCccccceec
Q psy15555        353 LSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIE---DPETCRNGFLA  429 (488)
Q Consensus       353 ~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~---~~~~~~~g~~~  429 (488)
                          .+|.|+|+++.+|+..+|+.||++|+||..|++|++++|||++|+|||+++.+|.. |++++   +    .+|+++
T Consensus       312 ----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~-eiv~~~~~~----~~G~lv  382 (465)
T PLN02871        312 ----TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIP-DIIPPDQEG----KTGFLY  382 (465)
T ss_pred             ----CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcH-hhhhcCCCC----CceEEe
Confidence                46999999999999999999999999999999999999999999999999999986 99988   6    899998


Q ss_pred             C--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHhhhh
Q psy15555        430 C--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLT-FTQPLFKV  483 (488)
Q Consensus       430 ~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~-~~~~~~~~  483 (488)
                      +  |+++++++|.++++ |++.+++|++++++.+++|||+.+++++++ .|++++..
T Consensus       383 ~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~  438 (465)
T PLN02871        383 TPGDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF  438 (465)
T ss_pred             CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            6  99999999999999 999999999999999999999999999998 69888764

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=1.6e-37  Score=305.97  Aligned_cols=372  Identities=16%  Similarity=0.189  Sum_probs=261.9

Q ss_pred             CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHH
Q psy15555         64 AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQ  143 (488)
Q Consensus        64 ~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      ..||.|+++.+++++|.++|  ++|.+++..........         .....+ +.+..++...+..............
T Consensus        18 ~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~~~---------~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~   85 (405)
T TIGR03449        18 DAGGMNVYILETATELARRG--IEVDIFTRATRPSQPPV---------VEVAPG-VRVRNVVAGPYEGLDKEDLPTQLCA   85 (405)
T ss_pred             CCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCCCc---------cccCCC-cEEEEecCCCcccCCHHHHHHHHHH
Confidence            46889999999999999994  55555554322111000         011122 5555443322211100011111111


Q ss_pred             HHHHHHHHHHHhh--hcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccc
Q psy15555        144 SIGSMILGVEALL--SFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPIL  220 (488)
Q Consensus       144 ~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                      ...  ....+.++  ..+||+||.+...+.... .++...++|++...|....   +    ....        ....   
T Consensus        86 ~~~--~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~---~----~~~~--------~~~~---  145 (405)
T TIGR03449        86 FTG--GVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAA---V----KNAA--------LADG---  145 (405)
T ss_pred             HHH--HHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHH---H----HHHh--------ccCC---
Confidence            110  11223333  347999998763333222 2233567899988884320   0    0000        0000   


Q ss_pred             hhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCC-------CCCCCCeEE
Q psy15555        221 TSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITH-------SKTDGPVKI  292 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~-------~~~~~~~~i  292 (488)
                      ....   .......++.+++.+|.++++|+...+.+.+.++. +.++.+++||+|.+.+.+...       ....+++++
T Consensus       146 ~~~~---~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~i  222 (405)
T TIGR03449       146 DTPE---PEARRIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVV  222 (405)
T ss_pred             CCCc---hHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCCcEE
Confidence            0000   01122235567788999999999999988876654 357899999999877654321       122457899


Q ss_pred             EEeeccCCCCChHHHHHHHHHhHHhhhhhccCc--eEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN--LKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       293 ~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~--~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      +++|++.+.||++.+++|++.+.++.     ++  ++|+++|..... .....++++++++++++.++|.+.|.++.+++
T Consensus       223 ~~~G~l~~~K~~~~li~a~~~l~~~~-----~~~~~~l~ivG~~~~~-g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~  296 (405)
T TIGR03449       223 AFVGRIQPLKAPDVLLRAVAELLDRD-----PDRNLRVIVVGGPSGS-GLATPDALIELAAELGIADRVRFLPPRPPEEL  296 (405)
T ss_pred             EEecCCCcccCHHHHHHHHHHHHhhC-----CCcceEEEEEeCCCCC-cchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence            99999999999999999999998776     55  999999964321 11334788999999999899999999999999


Q ss_pred             HHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHH
Q psy15555        371 KKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       371 ~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~  448 (488)
                      .++|+.||++++||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++|.++++ +++
T Consensus       297 ~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~-e~i~~~----~~g~~~~~~d~~~la~~i~~~l~-~~~  370 (405)
T TIGR03449       297 VHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLP-VAVADG----ETGLLVDGHDPADWADALARLLD-DPR  370 (405)
T ss_pred             HHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcH-hhhccC----CceEECCCCCHHHHHHHHHHHHh-CHH
Confidence            999999999999999999999999999999999999999886 888887    8899986  99999999999999 999


Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        449 TKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       449 ~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      .+.+|++++++.+++|||+.+++++.++|.+++.
T Consensus       371 ~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~  404 (405)
T TIGR03449       371 TRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA  404 (405)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence            9999999999988889999999999999998763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.4e-37  Score=301.53  Aligned_cols=356  Identities=17%  Similarity=0.201  Sum_probs=263.1

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||++++  .+..||.++++.+++++|.++|+++.+  ++...+....   ...         .. +.+...+.....  
T Consensus         1 mki~~~~--~p~~gG~~~~~~~la~~L~~~G~~v~v--~~~~~~~~~~---~~~---------~~-~~~~~~~~~~~~--   61 (371)
T cd04962           1 MKIGIVC--YPTYGGSGVVATELGKALARRGHEVHF--ITSSRPFRLD---EYS---------PN-IFFHEVEVPQYP--   61 (371)
T ss_pred             CceeEEE--EeCCCCccchHHHHHHHHHhcCCceEE--EecCCCcchh---hhc---------cC-eEEEEecccccc--
Confidence            7899886  345788999999999999999655554  4443221110   000         11 222222111110  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hh-hhh---CCCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LF-SYI---GGSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~-~~~---~~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                          ..............+.+.+++.+||+||.+...+..+. .+ ...   .++|++...|......            
T Consensus        62 ----~~~~~~~~~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------  125 (371)
T cd04962          62 ----LFQYPPYDLALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDITL------------  125 (371)
T ss_pred             ----hhhcchhHHHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcccc------------
Confidence                00000111222345667788899999997754443322 11 111   2788888888542100            


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----  283 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----  283 (488)
                                  ...     ...+..+.+..++++|.++++|+.+++.+.+.+..+.++.+++|++|...+.+...    
T Consensus       126 ------------~~~-----~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~  188 (371)
T cd04962         126 ------------VGQ-----DPSFQPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALK  188 (371)
T ss_pred             ------------ccc-----cccchHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHH
Confidence                        000     00111234456788999999999999999887766678999999998766543321    


Q ss_pred             ---CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        284 ---SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       284 ---~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                         ....++++++++|++.+.||++.+++|+..+.++      ++++++++|.+++.      +++++.+++.++.++|.
T Consensus       189 ~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~------~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~  256 (371)
T cd04962         189 RRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE------VPARLLLVGDGPER------SPAERLARELGLQDDVL  256 (371)
T ss_pred             HhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc------CCceEEEEcCCcCH------HHHHHHHHHcCCCceEE
Confidence               1234678899999999999999999999998765      47899999998643      67888888899888999


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQT  438 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~  438 (488)
                      +.|..  +++..+|+.||++++||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |.++++++
T Consensus       257 ~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~-e~i~~~----~~G~~~~~~~~~~l~~~  329 (371)
T cd04962         257 FLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIP-EVVKHG----ETGFLVDVGDVEAMAEY  329 (371)
T ss_pred             EecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCch-hhhcCC----CceEEcCCCCHHHHHHH
Confidence            99987  789999999999999999999999999999999999999999886 999887    8899987  89999999


Q ss_pred             HHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        439 IKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       439 i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      +.++++ +++.+.+|++++++.+ ++|||+.+++++.++|+++
T Consensus       330 i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~  371 (371)
T cd04962         330 ALSLLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYRRL  371 (371)
T ss_pred             HHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            999999 9999999999999996 9999999999999999864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.2e-36  Score=296.36  Aligned_cols=370  Identities=15%  Similarity=0.173  Sum_probs=255.1

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+|+|+.++   |.   ...|+++|.++  |++|.++|........               .. +++..++........
T Consensus         1 ~il~~~~~~p---~~---~~~la~~L~~~--G~~v~~~~~~~~~~~~---------------~~-v~~~~~~~~~~~~~~   56 (396)
T cd03818           1 RILFVHQNFP---GQ---FRHLAPALAAQ--GHEVVFLTEPNAAPPP---------------GG-VRVVRYRPPRGPTSG   56 (396)
T ss_pred             CEEEECCCCc---hh---HHHHHHHHHHC--CCEEEEEecCCCCCCC---------------CC-eeEEEecCCCCCCCC
Confidence            6899998876   22   45699999999  5556565554332111               01 444444432221111


Q ss_pred             CchhHHHH----HHHHHHHHHHHHH-hhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        134 LYPYFTLL----GQSIGSMILGVEA-LLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       134 ~~~~~~~~----~~~~~~~~~~~~~-l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                      ........    .+.........++ .+.++||+||.+.+|+..+.+.....++|++.++|......             
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~~-------------  123 (396)
T cd03818          57 THPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRAE-------------  123 (396)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecCC-------------
Confidence            22221111    1111112222222 24568999999998887765555456789999887544211             


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC----
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS----  284 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~----  284 (488)
                      .....+..............+.........++.+|.++++|+++++.+.+.+.  .++.+|+||+|.+.+.+....    
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~~~~~~  201 (396)
T cd03818         124 GADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQARLRL  201 (396)
T ss_pred             CCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCchhhhcc
Confidence            00000000000010000111112223445778999999999999999887554  579999999998877654321    


Q ss_pred             -----CCCCCeEEEEeec-cCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC------CcHHHHHHHHHHHH-
Q psy15555        285 -----KTDGPVKIISVAQ-FRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE------EDEVCVKDMQDLCK-  351 (488)
Q Consensus       285 -----~~~~~~~i~~~g~-~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~------~~~~~~~~l~~~~~-  351 (488)
                           ...++++++|+|| +.+.||++.+++|+..+.++.     |+++++|+|++...      ..++..+++.+... 
T Consensus       202 ~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~-----~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~  276 (396)
T cd03818         202 PNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRAR-----PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGG  276 (396)
T ss_pred             cccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHC-----CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhc
Confidence                 1235678999997 999999999999999998877     89999999974210      00112223222222 


Q ss_pred             hcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-
Q psy15555        352 HLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       352 ~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      ..+ .++|+|+|.+|++++..+|+.||+++++|..|++|++++||||||+|||+++.++.. |++.++    .+|++++ 
T Consensus       277 ~~~-~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~-e~i~~~----~~G~lv~~  350 (396)
T cd03818         277 RLD-LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR-EVITDG----ENGLLVDF  350 (396)
T ss_pred             ccC-cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch-hhcccC----CceEEcCC
Confidence            222 478999999999999999999999999999999999999999999999999999886 999888    8999986 


Q ss_pred             -CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        431 -DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       431 -~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                       |+++++++|.++++ +++.+.+|+++|++.+ ++|||+.++++|.
T Consensus       351 ~d~~~la~~i~~ll~-~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         351 FDPDALAAAVIELLD-DPARRARLRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence             89999999999999 9999999999999999 7799999999885

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=100.00  E-value=9.5e-37  Score=301.42  Aligned_cols=350  Identities=18%  Similarity=0.156  Sum_probs=249.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      .+..|+|....   |..+.+.+++++|.+++|++++++++.++++  .+....   .+    ... +.+.++|.+..   
T Consensus        50 ~~~iW~Ha~s~---Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~--~~~~~~---~~----~~~-~~~~~~P~d~~---  113 (425)
T PRK05749         50 GPLIWFHAVSV---GETRAAIPLIRALRKRYPDLPILVTTMTPTG--SERAQA---LF----GDD-VEHRYLPYDLP---  113 (425)
T ss_pred             CCeEEEEeCCH---HHHHHHHHHHHHHHHhCCCCcEEEeCCCccH--HHHHHH---hc----CCC-ceEEEecCCcH---
Confidence            34567776544   6669999999999999999999888877443  222221   11    122 55667777655   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEE--ecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYI--DTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii--~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                                      ..+.+++++++||+++  +++.|++.+..++ ..++|+++..|.                    
T Consensus       114 ----------------~~~~~~l~~~~Pd~v~~~~~~~~~~~l~~~~-~~~ip~vl~~~~--------------------  156 (425)
T PRK05749        114 ----------------GAVRRFLRFWRPKLVIIMETELWPNLIAELK-RRGIPLVLANAR--------------------  156 (425)
T ss_pred             ----------------HHHHHHHHhhCCCEEEEEecchhHHHHHHHH-HCCCCEEEEecc--------------------
Confidence                            3477889999999776  4567888766655 678898875431                    


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhcc-------C
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKI-------T  282 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~-------~  282 (488)
                               .+..+...++.+..+.+.+++.+|.|+++|+.+++++.+.+..++ +.+++|. +|.......       .
T Consensus       157 ---------~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r  226 (425)
T PRK05749        157 ---------LSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAERFLALGAKNE-VTVTGNLKFDIEVPPELAARAATLR  226 (425)
T ss_pred             ---------CChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCCC-cEecccccccCCCChhhHHHHHHHH
Confidence                     111122223345566777888999999999999999998654334 7788875 333211110       0


Q ss_pred             CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCC-----
Q psy15555        283 HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLEN-----  357 (488)
Q Consensus       283 ~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~-----  357 (488)
                      .....++++++++|++  .|+.+.+++|++++.++.     |+++|+|+|+|+     ++.+++++.+++.|+..     
T Consensus       227 ~~~~~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~-----~~~~liivG~g~-----~r~~~l~~~~~~~gl~~~~~~~  294 (425)
T PRK05749        227 RQLAPNRPVWIAASTH--EGEEELVLDAHRALLKQF-----PNLLLILVPRHP-----ERFKEVEELLKKAGLSYVRRSQ  294 (425)
T ss_pred             HHhcCCCcEEEEeCCC--chHHHHHHHHHHHHHHhC-----CCcEEEEcCCCh-----hhHHHHHHHHHhCCCcEEEccC
Confidence            0011356778888864  677889999999998777     899999999997     55578999999888742     


Q ss_pred             --------cEEEecCCChHHHHHHHHhCcE-EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        358 --------NVEFKVNLPYEDMKKEFSEGLI-GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       358 --------~v~~~g~~~~~el~~~~~~ad~-~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                              +|.+.+..  +|+..+|+.||+ ++.+|..|++|++++|||++|+|||+++..+...++.+.. .+.+.++.
T Consensus       295 ~~~~~~~~~v~l~~~~--~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~  371 (425)
T PRK05749        295 GEPPSADTDVLLGDTM--GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQ  371 (425)
T ss_pred             CCCCCCCCcEEEEecH--HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEE
Confidence                    34444444  899999999997 6667888999999999999999999988754444655432 01122333


Q ss_pred             cCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhh
Q psy15555        429 ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       429 ~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                      +.|+++++++|.++++ |++.+++|+++|++.++..  ....+++.+.+.+.+.+
T Consensus       372 ~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l~~  423 (425)
T PRK05749        372 VEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYLPP  423 (425)
T ss_pred             ECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhccc
Confidence            4599999999999999 9999999999999998443  46677777887776653

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=5.7e-36  Score=296.08  Aligned_cols=381  Identities=17%  Similarity=0.135  Sum_probs=249.9

Q ss_pred             CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCC--hhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHH
Q psy15555         64 AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS--PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLL  141 (488)
Q Consensus        64 ~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  141 (488)
                      ..||.++++.+|+++|.++|+-++|.++|......  .......    . ...... +.+..++........    ....
T Consensus        24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~----~-~~~~~g-v~v~r~~~~~~~~~~----~~~~   93 (439)
T TIGR02472        24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQP----I-ERIAPG-ARIVRLPFGPRRYLR----KELL   93 (439)
T ss_pred             CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCC----e-eEeCCC-cEEEEecCCCCCCcC----hhhh
Confidence            45789999999999999986422555555421110  0000000    0 011123 666666542211000    0001


Q ss_pred             HHH-HHHHHHHHHHhhh--cCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccC
Q psy15555        142 GQS-IGSMILGVEALLS--FQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANN  217 (488)
Q Consensus       142 ~~~-~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~  217 (488)
                      ... ........+.+++  .+|||||.+...+.... .++...++|++.+.|......  .....            ...
T Consensus        94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~--~~~~~------------~~~  159 (439)
T TIGR02472        94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREK--RRRLL------------AAG  159 (439)
T ss_pred             hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchh--hhhcc------------cCC
Confidence            111 1111233445554  37999998864333322 223356889999888532100  00000            000


Q ss_pred             ccchhhhHHHH-HHHHHHHHHHhcccCEEEEcChhHHHH-HHHHhc-cCCceEEEcCCCCchhhhccCCC----------
Q psy15555        218 PILTSFKLFYY-KVFALLYSHVGKYSDIIMVNSSWTEEH-VIQLWN-CQLKTYKLYPPCDTEDLKKITHS----------  284 (488)
Q Consensus       218 ~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~-~~~~~~-~~~k~~vi~~~~d~~~~~~~~~~----------  284 (488)
                      .........+. ......++..++.+|.++++|+..... +....+ .+.|+.+||||+|.+.|.+....          
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~  239 (439)
T TIGR02472       160 LKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLL  239 (439)
T ss_pred             CChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHH
Confidence            00000000010 000123567888999999998765433 333223 34589999999998887653211          


Q ss_pred             ----CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCc-----HHHHHHHHHHHHhcCC
Q psy15555        285 ----KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEED-----EVCVKDMQDLCKHLSL  355 (488)
Q Consensus       285 ----~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~-----~~~~~~l~~~~~~~~l  355 (488)
                          ..++.++++++||+.+.||++.+++|++.+.+...   .+++. +++|++++...     .++.+++.+++++.++
T Consensus       240 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~---~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l  315 (439)
T TIGR02472       240 APFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQE---MANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDL  315 (439)
T ss_pred             HhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhh---hccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCC
Confidence                12356789999999999999999999987532210   03333 35687764321     1234556778889999


Q ss_pred             CCcEEEecCCChHHHHHHHHhC----cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEG----LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~a----d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      .++|+|.|.++.+++.++|+.|    |+|+.||..|+||++++|||+||+|||+++.+|.. |++.++    .+|++++ 
T Consensus       316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~-eiv~~~----~~G~lv~~  390 (439)
T TIGR02472       316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPR-DIIANC----RNGLLVDV  390 (439)
T ss_pred             CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcH-HHhcCC----CcEEEeCC
Confidence            9999999999999999999987    89999999999999999999999999999999986 999888    8999986 


Q ss_pred             -CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        431 -DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       431 -~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                       |+++++++|.++++ |++.+++|++++++.+ ++|||+.+++++.++++
T Consensus       391 ~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~  439 (439)
T TIGR02472       391 LDLEAIASALEDALS-DSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ  439 (439)
T ss_pred             CCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence             99999999999999 9999999999999988 89999999999998863

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=2.4e-35  Score=298.10  Aligned_cols=374  Identities=13%  Similarity=0.099  Sum_probs=262.0

Q ss_pred             cccc-EEEEeccCCCCCCCceehHHHHHHHHHHhCC------------CeeEEEEeCCC-CCChhHHHHHhhhhcccccC
Q psy15555         50 NVLK-TVAFFHPYCNAGGGGERVLWTAVLALHQKYP------------DYKIYIYTGDV-DASPSEIIKRAHQRFNIVLP  115 (488)
Q Consensus        50 ~~~~-rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~------------~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~  115 (488)
                      .++- ||+++.+.... ||+|+++..|+.++.+.+.            ++.|++.+... .+. ........        
T Consensus       278 ~~~~~rIl~vi~sl~~-GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~-~~~~~~L~--------  347 (694)
T PRK15179        278 ESFVGPVLMINGSLGA-GGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGA-DFFAATLA--------  347 (694)
T ss_pred             CCCcceEEEEeCCCCC-CcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCc-chHHHHHH--------
Confidence            3444 99999887764 5699999999999999743            24566653321 111 11111110        


Q ss_pred             CCeeEEEEeeccceeec----cCchhHHH-----HHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeE
Q psy15555        116 DQVINFVYLYRRKFVEA----SLYPYFTL-----LGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVA  185 (488)
Q Consensus       116 ~~~v~~~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v  185 (488)
                      ..|+++..+........    .....+..     ....+...+.+.+++++.+|||||.+...+..+. ++....++|++
T Consensus       348 ~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvI  427 (694)
T PRK15179        348 DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRI  427 (694)
T ss_pred             hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEE
Confidence            11144544433321100    00111110     1123344566778899999999998765554433 33335678876


Q ss_pred             EEE-eCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-
Q psy15555        186 CYI-HYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-  263 (488)
Q Consensus       186 ~~~-h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-  263 (488)
                      +.. |...                       ........+..+...+..+   .....+.++++|+..++.+.+.++.+ 
T Consensus       428 v~t~h~~~-----------------------~~~~~~~~~~~~~~l~~~l---~~~~~~i~Vs~S~~~~~~l~~~~g~~~  481 (694)
T PRK15179        428 VLSVRTMP-----------------------PVDRPDRYRVEYDIIYSEL---LKMRGVALSSNSQFAAHRYADWLGVDE  481 (694)
T ss_pred             EEEeCCCc-----------------------cccchhHHHHHHHHHHHHH---HhcCCeEEEeCcHHHHHHHHHHcCCCh
Confidence            633 4210                       0000001111111111111   11245677888888888887765554 


Q ss_pred             CceEEEcCCCCchhhhccC----------CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEec
Q psy15555        264 LKTYKLYPPCDTEDLKKIT----------HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS  333 (488)
Q Consensus       264 ~k~~vi~~~~d~~~~~~~~----------~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~  333 (488)
                      +++.+||||+|...+.+..          .....+.++++++||+.+.||++.+++|++++.++.     |+++|+|+|+
T Consensus       482 ~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~-----p~~~LvIvG~  556 (694)
T PRK15179        482 RRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASH-----PKVRFIMVGG  556 (694)
T ss_pred             hHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHC-----cCeEEEEEcc
Confidence            5899999999987664321          111234678999999999999999999999998887     8999999999


Q ss_pred             CCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc
Q psy15555        334 TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM  413 (488)
Q Consensus       334 ~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~  413 (488)
                      |+..      ++++++++++++.++|.|.|+.  +++..+|+.||++++||..|+||++++|||++|+|||+++.+|.. 
T Consensus       557 G~~~------~~L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~-  627 (694)
T PRK15179        557 GPLL------ESVREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAG-  627 (694)
T ss_pred             Ccch------HHHHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChH-
Confidence            8643      7899999999999999999998  689999999999999999999999999999999999999999987 


Q ss_pred             ceeccCCCccccceecC--C--HHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        414 DIVIEDPETCRNGFLAC--D--EVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       414 eiv~~~~~~~~~g~~~~--~--~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      |++.++    .+|++++  |  ++++++++.+++. +.....++++++++.+ ++|||+.+++++.++|+
T Consensus       628 EiV~dg----~~GlLv~~~d~~~~~La~aL~~ll~-~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~  692 (694)
T PRK15179        628 EAVQEG----VTGLTLPADTVTAPDVAEALARIHD-MCAADPGIARKAADWASARFSLNQMIASTVRCYQ  692 (694)
T ss_pred             HHccCC----CCEEEeCCCCCChHHHHHHHHHHHh-ChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            999988    8999986  4  4689999998887 6666678888999988 89999999999999985

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=9.4e-36  Score=292.02  Aligned_cols=364  Identities=14%  Similarity=0.187  Sum_probs=262.3

Q ss_pred             cEEEEeccCCCC--CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee
Q psy15555         53 KTVAFFHPYCNA--GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        53 ~rI~~~~~~~~~--~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      |||++++..+.+  .||.++.+.+++++|.++ ++++|+++....       . .         ... +.+..++.....
T Consensus         1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~-------~-~---------~~~-~~~~~~~~~~~~   61 (388)
T TIGR02149         1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDVRCFGDQR-------F-D---------SEG-LTVKGYRPWSEL   61 (388)
T ss_pred             CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeEEcCCCch-------h-c---------CCC-eEEEEecChhhc
Confidence            799999887764  488999999999999987 578776543221       0 0         012 444333221111


Q ss_pred             eccCchhHHHHHHHHHHH-HHHHHHhhhcCCcEEEecCCccchhhhh-hhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        131 EASLYPYFTLLGQSIGSM-ILGVEALLSFQPDIYIDTMGYAFTYPLF-SYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~pDiii~~~~~~~~~~~~-~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                      ..     .   ...+... ..+.......+||++|.+..++.....+ +...++|++...|........           
T Consensus        62 ~~-----~---~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-----------  122 (388)
T TIGR02149        62 KE-----A---NKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEPLRPW-----------  122 (388)
T ss_pred             cc-----h---hhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeecccccccc-----------
Confidence            00     0   0011111 1111222345799999887555433322 335689999988854210000           


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHh-cc-CCceEEEcCCCCchhhhccCC---
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLW-NC-QLKTYKLYPPCDTEDLKKITH---  283 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~-~~k~~vi~~~~d~~~~~~~~~---  283 (488)
                      .      ......     .+....++++..++.+|.++++|+.+++.+.+.+ +. ..++.+++|++|.+.+.+...   
T Consensus       123 ~------~~~~~~-----~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~  191 (388)
T TIGR02149       123 K------EEQLGG-----GYKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVV  191 (388)
T ss_pred             c------cccccc-----chhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHH
Confidence            0      000000     1123445667788999999999999999998876 32 357899999999876654321   


Q ss_pred             ----CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-Cc
Q psy15555        284 ----SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-NN  358 (488)
Q Consensus       284 ----~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~  358 (488)
                          ....++++++|+|++.+.||++.+++|++++.        ++++++++|+++..  .+..+++++.+++++.. ++
T Consensus       192 ~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~--------~~~~l~i~g~g~~~--~~~~~~~~~~~~~~~~~~~~  261 (388)
T TIGR02149       192 LDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP--------KDVQVVLCAGAPDT--PEVAEEVRQAVALLDRNRTG  261 (388)
T ss_pred             HHHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh--------hcCcEEEEeCCCCc--HHHHHHHHHHHHHhccccCc
Confidence                12345679999999999999999999999885        46788998887643  24557777777776652 34


Q ss_pred             EEEe-cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CH---
Q psy15555        359 VEFK-VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DE---  432 (488)
Q Consensus       359 v~~~-g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~---  432 (488)
                      +.+. |.++.+++..+|+.||+++.||..|++|++++|||++|+|||+++.++.. |+++++    .+|++++  |.   
T Consensus       262 v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~-e~i~~~----~~G~~~~~~~~~~~  336 (388)
T TIGR02149       262 IIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIP-EVVVDG----ETGFLVPPDNSDAD  336 (388)
T ss_pred             eEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHH-HHhhCC----CceEEcCCCCCccc
Confidence            6665 67899999999999999999999999999999999999999999999986 999887    8899986  66   


Q ss_pred             ---HHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhh
Q psy15555        433 ---VEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       433 ---~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~  481 (488)
                         ++++++|.++++ |++.+++|++++++.+ ++|||+.+++++.++|++++
T Consensus       337 ~~~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~  388 (388)
T TIGR02149       337 GFQAELAKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL  388 (388)
T ss_pred             chHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence               899999999999 9999999999999988 89999999999999998764

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=3.4e-35  Score=285.01  Aligned_cols=227  Identities=19%  Similarity=0.239  Sum_probs=193.5

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC-------CCCCCCeEEEEeeccCCCCChHHHHHHHH
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-------SKTDGPVKIISVAQFRPEKDHPLQLRAMY  312 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~-------~~~~~~~~i~~~g~~~~~k~~~~ll~a~~  312 (488)
                      ..++.++++|+..++.+.+.++ ..++.++|||+|.+.+.+...       ....++.+++|+|++.+.||++.+++|++
T Consensus       138 ~~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~  216 (380)
T PRK15484        138 DKNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE  216 (380)
T ss_pred             ccCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence            4579999999999999988554 457999999999876654221       12235688999999999999999999999


Q ss_pred             HhHHhhhhhccCceEEEEEecCCCCC---cHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC-CCc
Q psy15555        313 QLRQIISEELWDNLKLIFIGSTRNEE---DEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW-NEH  388 (488)
Q Consensus       313 ~l~~~~~~~~~~~~~l~ivG~~~~~~---~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~-~e~  388 (488)
                      .+.++.     |+++|+|+|+++...   ..++.+++++++++++  +++.+.|.++.+++..+|+.||+++.||. .|+
T Consensus       217 ~l~~~~-----p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~  289 (380)
T PRK15484        217 KLATAH-----SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEA  289 (380)
T ss_pred             HHHHhC-----CCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccc
Confidence            998887     899999999886432   2345567777777765  57999999999999999999999999996 599


Q ss_pred             CCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee-cC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhc
Q psy15555        389 FGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL-AC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRF  464 (488)
Q Consensus       389 ~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~-~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~  464 (488)
                      ||++++|||+||+|||+++.+|.. |++.++    .+|++ ++  |+++++++|.++++ |++. .++++++++.+ ++|
T Consensus       290 f~~~~lEAma~G~PVI~s~~gg~~-Eiv~~~----~~G~~l~~~~d~~~la~~I~~ll~-d~~~-~~~~~~ar~~~~~~f  362 (380)
T PRK15484        290 FCMVAVEAMAAGKPVLASTKGGIT-EFVLEG----ITGYHLAEPMTSDSIISDINRTLA-DPEL-TQIAEQAKDFVFSKY  362 (380)
T ss_pred             cccHHHHHHHcCCCEEEeCCCCcH-hhcccC----CceEEEeCCCCHHHHHHHHHHHHc-CHHH-HHHHHHHHHHHHHhC
Confidence            999999999999999999999987 999888    88984 43  99999999999999 8875 78999999888 999


Q ss_pred             CHHHHHHHHHHHHHHhh
Q psy15555        465 SMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       465 s~~~~~~~~~~~~~~~~  481 (488)
                      ||+.+++++.++|++.+
T Consensus       363 sw~~~a~~~~~~l~~~~  379 (380)
T PRK15484        363 SWEGVTQRFEEQIHNWF  379 (380)
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            99999999999998764

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=2e-35  Score=287.55  Aligned_cols=283  Identities=19%  Similarity=0.280  Sum_probs=228.4

Q ss_pred             HHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        151 GVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       151 ~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ..+++++.+||+||.+........ .+....++|++.+.|........                    .......   ++
T Consensus        74 ~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~--------------------~~~~~~~---~~  130 (367)
T cd05844          74 LRRLLRRHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSL--------------------ALLLRSR---WA  130 (367)
T ss_pred             HHHHHHhhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccc--------------------hhhcccc---hh
Confidence            444678899999998754332222 12235689999988854321100                    0000000   23


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHH
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLR  309 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~  309 (488)
                      .+...++.+++.+|.++++|+.+++.+.+.+..+.++.+++|++|.+.+.+..  ...++.+++++|++.+.||.+.+++
T Consensus       131 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~--~~~~~~~i~~~G~~~~~K~~~~li~  208 (367)
T cd05844         131 LYARRRRRLARRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPAT--PARRPPRILFVGRFVEKKGPLLLLE  208 (367)
T ss_pred             HHHHHHHHHHHhcCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCC--CCCCCcEEEEEEeeccccChHHHHH
Confidence            33445666778999999999999999998644445899999999987765432  2245678999999999999999999


Q ss_pred             HHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC----
Q psy15555        310 AMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW----  385 (488)
Q Consensus       310 a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~----  385 (488)
                      |++.+.++.     ++++|+++|+++.      .+++++.++++++.++|.+.|.++.+++..+|+.||+++.||.    
T Consensus       209 a~~~l~~~~-----~~~~l~ivG~g~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~  277 (367)
T cd05844         209 AFARLARRV-----PEVRLVIIGDGPL------LAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPS  277 (367)
T ss_pred             HHHHHHHhC-----CCeEEEEEeCchH------HHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCC
Confidence            999998877     8999999998852      3778899999888899999999999999999999999999995    


Q ss_pred             --CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q psy15555        386 --NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV  461 (488)
Q Consensus       386 --~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~  461 (488)
                        .|++|++++|||++|+|||+++.++.. |++.++    ++|++++  |+++++++|.++++ +++.+.+++.++++.+
T Consensus       278 ~~~E~~~~~~~EA~a~G~PvI~s~~~~~~-e~i~~~----~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~  351 (367)
T cd05844         278 GDAEGLPVVLLEAQASGVPVVATRHGGIP-EAVEDG----ETGLLVPEGDVAALAAALGRLLA-DPDLRARMGAAGRRRV  351 (367)
T ss_pred             CCccCCchHHHHHHHcCCCEEEeCCCCch-hheecC----CeeEEECCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence              589999999999999999999999986 888887    7899986  89999999999999 9999999999999998


Q ss_pred             -hhcCHHHHHHHHHH
Q psy15555        462 -DRFSMEEFKNGFLT  475 (488)
Q Consensus       462 -~~~s~~~~~~~~~~  475 (488)
                       ++|||+..++++.+
T Consensus       352 ~~~~s~~~~~~~l~~  366 (367)
T cd05844         352 EERFDLRRQTAKLEA  366 (367)
T ss_pred             HHHCCHHHHHHHHhc
Confidence             89999999999875

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=9.5e-35  Score=298.49  Aligned_cols=407  Identities=16%  Similarity=0.159  Sum_probs=275.0

Q ss_pred             cccEEEEeccC-------C-----CCCCCceehHHHHHHHHHHhCCC-eeEEEEeCCCCCCh--------hHHHHHh-hh
Q psy15555         51 VLKTVAFFHPY-------C-----NAGGGGERVLWTAVLALHQKYPD-YKIYIYTGDVDASP--------SEIIKRA-HQ  108 (488)
Q Consensus        51 ~~~rI~~~~~~-------~-----~~~gG~e~~~~~l~~~L~~~~~~-~~v~~~~~~~~~~~--------~~~~~~~-~~  108 (488)
                      ++|.|++++..       .     ...||...++..|+++|.+++ + ++|.++|.......        .+..... ..
T Consensus       168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~-gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~  246 (1050)
T TIGR02468       168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMP-GVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSE  246 (1050)
T ss_pred             CceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCC-CCCEEEEEeCCcCccccccccCCccccccccccc
Confidence            46788886521       1     134567789999999999984 3 37777777543210        0000000 00


Q ss_pred             hc--ccccCCCeeEEEEeeccc---eeec-cCchhHHHHHHHHHHHH-HHHHHh-h------hcCCcEEEecCCccchhh
Q psy15555        109 RF--NIVLPDQVINFVYLYRRK---FVEA-SLYPYFTLLGQSIGSMI-LGVEAL-L------SFQPDIYIDTMGYAFTYP  174 (488)
Q Consensus       109 ~~--~~~~~~~~v~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~-~~~~~l-~------~~~pDiii~~~~~~~~~~  174 (488)
                      -+  ......+ +.+++++...   ++.+ .+|+++.-+...+.... ...+.+ .      ...||+||.+........
T Consensus       247 ~~~~~~~~~~g-~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa  325 (1050)
T TIGR02468       247 NDGDEMGESSG-AYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSA  325 (1050)
T ss_pred             cccccccCCCC-eEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHH
Confidence            00  0011123 6777666532   2232 23555444333322110 000111 1      124999998853322222


Q ss_pred             -hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccc--hhhhHHHH-HHHHHHHHHHhcccCEEEEcCh
Q psy15555        175 -LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPIL--TSFKLFYY-KVFALLYSHVGKYSDIIMVNSS  250 (488)
Q Consensus       175 -~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~  250 (488)
                       .++...++|++.+.|.-..       .+....        ...+..  ......|. ......++.++..||.||+.|+
T Consensus       326 ~~L~~~lgVP~V~T~HSLgr-------~K~~~l--------l~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~  390 (1050)
T TIGR02468       326 ALLSGALNVPMVLTGHSLGR-------DKLEQL--------LKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTR  390 (1050)
T ss_pred             HHHHHhhCCCEEEECccchh-------hhhhhh--------cccccccccccccccchHHHHHHHHHHHHhcCEEEEeCH
Confidence             3333568999999995310       000000        000000  00000010 1111256788999999999999


Q ss_pred             hHHHHHHHHhcc-----------------------CCceEEEcCCCCchhhhccCCC-----------------------
Q psy15555        251 WTEEHVIQLWNC-----------------------QLKTYKLYPPCDTEDLKKITHS-----------------------  284 (488)
Q Consensus       251 ~~~~~~~~~~~~-----------------------~~k~~vi~~~~d~~~~~~~~~~-----------------------  284 (488)
                      ..++....+|..                       ..++.|||||+|.+.|.+....                       
T Consensus       391 qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l  470 (1050)
T TIGR02468       391 QEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEI  470 (1050)
T ss_pred             HHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHH
Confidence            999876666531                       2388999999999988764210                       


Q ss_pred             ----CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCC-----cHHHHHHHHHHHHhcCC
Q psy15555        285 ----KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEE-----DEVCVKDMQDLCKHLSL  355 (488)
Q Consensus       285 ----~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~-----~~~~~~~l~~~~~~~~l  355 (488)
                          ..+++++|+++||+.++||++.+++|+..+.+...   .+++. +|+|.++..+     ..+...+++++++++++
T Consensus       471 ~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~---~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL  546 (1050)
T TIGR02468       471 MRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRE---LANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDL  546 (1050)
T ss_pred             HhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhcc---CCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCC
Confidence                12456789999999999999999999999875320   03565 4668765321     12345778899999999


Q ss_pred             CCcEEEecCCChHHHHHHHHhC----cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEG----LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~a----d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      .++|.|.|+++.+++..+|+.|    |+||+||..|+||++++||||||+|||+++.+|.. |++.++    .+|++++ 
T Consensus       547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~-EII~~g----~nGlLVdP  621 (1050)
T TIGR02468       547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPV-DIHRVL----DNGLLVDP  621 (1050)
T ss_pred             CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcH-HHhccC----CcEEEECC
Confidence            9999999999999999999988    69999999999999999999999999999999997 999888    8999987 


Q ss_pred             -CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        431 -DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       431 -~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                       |+++++++|.++++ |++.+++|++++++.+++|||+.+++++++.+..+....
T Consensus       622 ~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~  675 (1050)
T TIGR02468       622 HDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRH  675 (1050)
T ss_pred             CCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccC
Confidence             99999999999999 999999999999999988999999999999999876544

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=1.1e-35  Score=287.44  Aligned_cols=348  Identities=15%  Similarity=0.181  Sum_probs=249.1

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||+++.+.....||+|+++.+++++|.++++++++++++.+..... ...+.....  ... .. +.   +.....   
T Consensus         1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~-~~~~~~~~~--~~~-~~-~~---~~~~~~---   69 (359)
T PRK09922          1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDK-AWLKEIKYA--QSF-SN-IK---LSFLRR---   69 (359)
T ss_pred             CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCCh-HHHHhcchh--ccc-cc-ch---hhhhcc---
Confidence            89999988777778999999999999999977899888887643221 111111000  000 00 00   000000   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCe--eEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSK--VACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~--~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                                  ......+.+.+++.+||+||++...+..+. .++...+.|  ++.+.|....                
T Consensus        70 ------------~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~----------------  121 (359)
T PRK09922         70 ------------AKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLD----------------  121 (359)
T ss_pred             ------------cHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccc----------------
Confidence                        011234557888999999998864443322 222233443  4444442210                


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCC
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGP  289 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~  289 (488)
                             +   ..    .+.    .  ..+..+|.++++|+..++.+.+.+..+.++.+++|++|.+.+..... ...++
T Consensus       122 -------~---~~----~~~----~--~~~~~~d~~i~~S~~~~~~~~~~~~~~~ki~vi~N~id~~~~~~~~~-~~~~~  180 (359)
T PRK09922        122 -------H---KK----HAE----C--KKITCADYHLAISSGIKEQMMARGISAQRISVIYNPVEIKTIIIPPP-ERDKP  180 (359)
T ss_pred             -------c---cc----hhh----h--hhhhcCCEEEEcCHHHHHHHHHcCCCHHHEEEEcCCCCHHHccCCCc-ccCCC
Confidence                   0   00    000    0  01267899999999999999885444458999999999655432211 22356


Q ss_pred             eEEEEeeccC--CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC-
Q psy15555        290 VKIISVAQFR--PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP-  366 (488)
Q Consensus       290 ~~i~~~g~~~--~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~-  366 (488)
                      ++++++||+.  +.||++.+++|+.++.        ++++++++|.|++.      +++++.+++++++++|.|+|+++ 
T Consensus       181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~--------~~~~l~ivG~g~~~------~~l~~~~~~~~l~~~v~f~G~~~~  246 (359)
T PRK09922        181 AVFLYVGRLKFEGQKNVKELFDGLSQTT--------GEWQLHIIGDGSDF------EKCKAYSRELGIEQRIIWHGWQSQ  246 (359)
T ss_pred             cEEEEEEEEecccCcCHHHHHHHHHhhC--------CCeEEEEEeCCccH------HHHHHHHHHcCCCCeEEEecccCC
Confidence            8899999986  4699999999998773        57899999999743      78899999999999999999874 


Q ss_pred             -hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeC-CCCCccceeccCCCccccceecC--CHHHHHHHHHHH
Q psy15555        367 -YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHK-SGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLI  442 (488)
Q Consensus       367 -~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~-~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~l  442 (488)
                       .+++.++|+.||++++||..|+||++++||||||+|||+++ .+|.. |++.++    .+|++++  |+++++++|.++
T Consensus       247 ~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~-eiv~~~----~~G~lv~~~d~~~la~~i~~l  321 (359)
T PRK09922        247 PWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPR-DIIKPG----LNGELYTPGNIDEFVGKLNKV  321 (359)
T ss_pred             cHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChH-HHccCC----CceEEECCCCHHHHHHHHHHH
Confidence             47899999999999999999999999999999999999999 78875 999888    8999875  999999999999


Q ss_pred             HccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        443 LHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       443 l~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      ++ +++.+.  .....+.+.+|+.+.+.+++.+.++.+++
T Consensus       322 ~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (359)
T PRK09922        322 IS-GEVKYQ--HDAIPNSIERFYEVLYFKNLNNALFSKLQ  358 (359)
T ss_pred             Hh-CcccCC--HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            99 887541  12222334889999999999999988765

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.5e-35  Score=286.37  Aligned_cols=364  Identities=18%  Similarity=0.237  Sum_probs=258.8

Q ss_pred             CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHH
Q psy15555         64 AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQ  143 (488)
Q Consensus        64 ~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      ..||.++++.+++++|.++|++  |.+++..........         ...... +.+..++............+...  
T Consensus        19 ~~GG~~~~~~~l~~~L~~~g~~--V~v~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--   84 (398)
T cd03800          19 DTGGQNVYVLELARALARLGHE--VDIFTRRIDDALPPI---------VELAPG-VRVVRVPAGPAEYLPKEELWPYL--   84 (398)
T ss_pred             CCCceeehHHHHHHHHhccCce--EEEEEecCCcccCCc---------cccccc-eEEEecccccccCCChhhcchhH--
Confidence            4678999999999999998544  444444322111100         011122 44444433211100000001111  


Q ss_pred             HHHHHHHHHHHhhhc--CCcEEEecCCccchh-hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccc
Q psy15555        144 SIGSMILGVEALLSF--QPDIYIDTMGYAFTY-PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPIL  220 (488)
Q Consensus       144 ~~~~~~~~~~~l~~~--~pDiii~~~~~~~~~-~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  220 (488)
                       ......+.+.++..  +||+||.+....... ..++...++|++...|......                    .....
T Consensus        85 -~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------------------~~~~~  143 (398)
T cd03800          85 -DEFADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVK--------------------RRHLG  143 (398)
T ss_pred             -HHHHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCceEEEeecccccC--------------------Ccccc
Confidence             11112233445555  999998765322222 2233356889888888532100                    00000


Q ss_pred             hhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCC-ceEEEcCCCCchhhhccCC--------CCCCCCeE
Q psy15555        221 TSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKKITH--------SKTDGPVK  291 (488)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~-k~~vi~~~~d~~~~~~~~~--------~~~~~~~~  291 (488)
                      .... .........++.+++.+|.++++|+..++.+.+.+..+. ++.+++|++|.+.+.+...        ....++++
T Consensus       144 ~~~~-~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (398)
T cd03800         144 AADT-YEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPR  222 (398)
T ss_pred             cccc-cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcE
Confidence            0000 011112234566788999999999999999988776443 5899999999876654332        12346789


Q ss_pred             EEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHH
Q psy15555        292 IISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMK  371 (488)
Q Consensus       292 i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~  371 (488)
                      ++|+||+.+.||++.+++|+..+.++.     ++++++++|+++.........+++++++..++.+++.++|+++.+|+.
T Consensus       223 i~~~gr~~~~k~~~~ll~a~~~l~~~~-----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~  297 (398)
T cd03800         223 ILAVGRLDPRKGIDTLIRAYAELPELR-----ERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLP  297 (398)
T ss_pred             EEEEcccccccCHHHHHHHHHHHHHhC-----CCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHH
Confidence            999999999999999999999998876     799999999987654334446678888889988999999999999999


Q ss_pred             HHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHH
Q psy15555        372 KEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDT  449 (488)
Q Consensus       372 ~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~  449 (488)
                      .+|+.||++++||..|++|++++|||++|+|||+++.++.. ++++++    ++|++++  |+++++++|.++++ +++.
T Consensus       298 ~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~-e~i~~~----~~g~~~~~~~~~~l~~~i~~l~~-~~~~  371 (398)
T cd03800         298 ALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPR-DIVVDG----VTGLLVDPRDPEALAAALRRLLT-DPAL  371 (398)
T ss_pred             HHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHH-HHccCC----CCeEEeCCCCHHHHHHHHHHHHh-CHHH
Confidence            99999999999999999999999999999999999998886 899887    8899986  89999999999999 9999


Q ss_pred             HHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        450 KTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       450 ~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                      ++++++++++.+ ++|||+.+++++.
T Consensus       372 ~~~~~~~a~~~~~~~~s~~~~~~~~~  397 (398)
T cd03800         372 RRRLSRAGLRRARARYTWERVAARLL  397 (398)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            999999999999 9999999999875

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=5.5e-34  Score=288.35  Aligned_cols=413  Identities=15%  Similarity=0.109  Sum_probs=268.8

Q ss_pred             ccccEEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhh---h----cc-----c--
Q psy15555         50 NVLKTVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQ---R----FN-----I--  112 (488)
Q Consensus        50 ~~~~rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~----~~-----~--  112 (488)
                      ..+|||+|+...+.   ..||..-++..|.++|+++|+  +|.++++..+............   .    ++     .  
T Consensus       479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~Gh--dV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v  556 (977)
T PLN02939        479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGH--LVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKI  556 (977)
T ss_pred             CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCC--eEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEE
Confidence            45799999875433   467888999999999999954  5545555433221111111000   0    10     0  


Q ss_pred             --ccCCCeeEEEEeecc----ceeeccCchhHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchh-hhhhh-----
Q psy15555        113 --VLPDQVINFVYLYRR----KFVEASLYPYFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTY-PLFSY-----  178 (488)
Q Consensus       113 --~~~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~-~~~~~-----  178 (488)
                        ....+ +.+..+...    .+.....++.-.-..++..+.+++..++.+  ++|||||++......+ |++..     
T Consensus       557 ~~~~~~G-V~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~  635 (977)
T PLN02939        557 WTGTVEG-LPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPK  635 (977)
T ss_pred             EEEEECC-eeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhc
Confidence              01122 555555421    111122221111111212222334444443  6899999887555554 33321     


Q ss_pred             -hCCCeeEEEEeCCccchHHH-HHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHH
Q psy15555        179 -IGGSKVACYIHYPTITKEML-TRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHV  256 (488)
Q Consensus       179 -~~~~~~v~~~h~p~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~  256 (488)
                       ..++|+++++|.-...-.+. ..+...  ..... .+..   .......++..+. +.+..+..+|.|+++|+..++.+
T Consensus       636 ~~~~~ktVfTIHNl~yQG~f~~~~l~~l--GL~~~-~l~~---~d~le~~~~~~iN-~LK~GIv~AD~VtTVSptYA~EI  708 (977)
T PLN02939        636 GFNSARICFTCHNFEYQGTAPASDLASC--GLDVH-QLDR---PDRMQDNAHGRIN-VVKGAIVYSNIVTTVSPTYAQEV  708 (977)
T ss_pred             cCCCCcEEEEeCCCcCCCcCCHHHHHHc--CCCHH-HccC---hhhhhhccCCchH-HHHHHHHhCCeeEeeeHHHHHHH
Confidence             24578999999653211000 000000  00000 0000   0000000001111 12233456899999999999998


Q ss_pred             HHHhc---------cCCceEEEcCCCCchhhhccCCC--------------------------CC---CCCeEEEEeecc
Q psy15555        257 IQLWN---------CQLKTYKLYPPCDTEDLKKITHS--------------------------KT---DGPVKIISVAQF  298 (488)
Q Consensus       257 ~~~~~---------~~~k~~vi~~~~d~~~~~~~~~~--------------------------~~---~~~~~i~~~g~~  298 (488)
                      ...++         ...++.+|+||+|.+.+.+....                          .+   .+.++++++||+
T Consensus       709 ~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL  788 (977)
T PLN02939        709 RSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRL  788 (977)
T ss_pred             HHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecC
Confidence            76332         23488999999999887764320                          11   245899999999


Q ss_pred             CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCc
Q psy15555        299 RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGL  378 (488)
Q Consensus       299 ~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad  378 (488)
                      .++||++.+++|+..+.+       ++++|+|+|+||..   .+.++++++++++++.++|.|.|..+..+...+|+.||
T Consensus       789 ~~QKGiDlLleA~~~Ll~-------~dvqLVIvGdGp~~---~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaAD  858 (977)
T PLN02939        789 VPQKGVHLIRHAIYKTAE-------LGGQFVLLGSSPVP---HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASD  858 (977)
T ss_pred             CcccChHHHHHHHHHHhh-------cCCEEEEEeCCCcH---HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCC
Confidence            999999999999988864       47899999999743   45578889999998888999999987777789999999


Q ss_pred             EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCC-----CccccceecC--CHHHHHHHHHHHHc---cCHH
Q psy15555        379 IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP-----ETCRNGFLAC--DEVEYAQTIKLILH---LSQD  448 (488)
Q Consensus       379 ~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~-----~~~~~g~~~~--~~~~l~~~i~~ll~---~~~~  448 (488)
                      +|++||..|+||++++|||+||+|+|+++.||.. |+|.+.+     .++.+|++++  |+++++++|.+++.   .+++
T Consensus       859 IFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe  937 (977)
T PLN02939        859 MFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPE  937 (977)
T ss_pred             EEEECCCccCCcHHHHHHHHCCCCEEEecCCCCc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHH
Confidence            9999999999999999999999999999999997 7776521     1126899976  99999999988753   2789


Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        449 TKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       449 ~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                      .+++|++++..  +.|||+.++++|.++|++++....
T Consensus       938 ~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~~~~  972 (977)
T PLN02939        938 VWKQLVQKDMN--IDFSWDSSASQYEELYQRAVARAR  972 (977)
T ss_pred             HHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999987643  789999999999999999986543

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=2.4e-34  Score=279.78  Aligned_cols=357  Identities=17%  Similarity=0.150  Sum_probs=246.8

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++.+.. ..||.++++.++++.|.+.++++++++.....+  .-...+......     .. ... .++..      
T Consensus         1 ki~~~~~~~-~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~-----~g-~~~-~~~~~------   64 (372)
T cd03792           1 KVLHVNSTP-YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPE--FFNVTKKFHNAL-----QG-ADI-ELSEE------   64 (372)
T ss_pred             CeEEEeCCC-CCCcHHHHHHHHHHHHHHcCCCceEEecCCChh--HHHHHHHhhHhh-----cC-CCC-CCCHH------
Confidence            578877665 567899999999999999976666665433211  101001110000     00 111 01000      


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQR  213 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~  213 (488)
                         ....+.....  ....+.+...+||+||.+...+..+..+....++|++.++|......                  
T Consensus        65 ---~~~~~~~~~~--~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~~~------------------  121 (372)
T cd03792          65 ---EKEIYLEWNE--ENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLSSP------------------  121 (372)
T ss_pred             ---HHHHHHHHHH--HHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecCCC------------------
Confidence               0000000000  00111344678999997765555544444334889888888643100                  


Q ss_pred             cccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhh-----cc-----C-
Q psy15555        214 VANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLK-----KI-----T-  282 (488)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~-----~~-----~-  282 (488)
                            .    ...++    +.+..++++|.+++.|+..   ... +..+.++ ++||++|.....     +.     . 
T Consensus       122 ------~----~~~~~----~~~~~~~~~d~~i~~~~~~---~~~-~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~  182 (372)
T cd03792         122 ------N----RRVWD----FLQPYIEDYDAAVFHLPEY---VPP-QVPPRKV-IIPPSIDPLSGKNRELSPADIEYILE  182 (372)
T ss_pred             ------c----HHHHH----HHHHHHHhCCEEeecHHHh---cCC-CCCCceE-EeCCCCCCCccccCCCCHHHHHHHHH
Confidence                  0    11111    2234557789999888332   222 2223344 999999864211     00     0 


Q ss_pred             -CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEE
Q psy15555        283 -HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF  361 (488)
Q Consensus       283 -~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~  361 (488)
                       .....++++++++||+.+.||++.+++|++.+.+..     ++++|+++|+++..+. +..+.++++.+..++.++|.+
T Consensus       183 ~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~-----~~~~l~i~G~g~~~~~-~~~~~~~~~~~~~~~~~~v~~  256 (372)
T cd03792         183 KYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERV-----PDPQLVLVGSGATDDP-EGWIVYEEVLEYAEGDPDIHV  256 (372)
T ss_pred             HhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhC-----CCCEEEEEeCCCCCCc-hhHHHHHHHHHHhCCCCCeEE
Confidence             112356789999999999999999999999998876     7899999999875321 222445555556677788999


Q ss_pred             ecCC--ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHH
Q psy15555        362 KVNL--PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTI  439 (488)
Q Consensus       362 ~g~~--~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i  439 (488)
                      .|..  +.+++..+|+.||+++.||..|+||++++|||+||+|||+++.++.. +++.++    .+|+++++.++++++|
T Consensus       257 ~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~-~~i~~~----~~g~~~~~~~~~a~~i  331 (372)
T cd03792         257 LTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIP-LQIEDG----ETGFLVDTVEEAAVRI  331 (372)
T ss_pred             EecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCch-hhcccC----CceEEeCCcHHHHHHH
Confidence            9886  88999999999999999999999999999999999999999999886 888887    8999999999999999


Q ss_pred             HHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        440 KLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       440 ~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      .+++. +++.+++|++++++.+ ++|||+.+++++.++|+++
T Consensus       332 ~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~  372 (372)
T cd03792         332 LYLLR-DPELRRKMGANAREHVRENFLITRHLKDYLYLISKL  372 (372)
T ss_pred             HHHHc-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence            99999 9999999999999998 8999999999999999863

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>PLN02316 synthase/transferase

Probab=100.00  E-value=4.4e-34  Score=294.56  Aligned_cols=382  Identities=14%  Similarity=0.082  Sum_probs=261.3

Q ss_pred             cccccEEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhh--hcc---------ccc
Q psy15555         49 YNVLKTVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQ--RFN---------IVL  114 (488)
Q Consensus        49 ~~~~~rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~---------~~~  114 (488)
                      +..+|||++++..+.   ..||..-++..|.++|++.|  ++|.+++...+............  .+.         ...
T Consensus       584 ~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~  661 (1036)
T PLN02316        584 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGK  661 (1036)
T ss_pred             CCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEE
Confidence            345799999875444   36788899999999999995  55555555433211100000000  000         000


Q ss_pred             CCCeeEEEEeeccc-eee-ccCchhHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCCccchhhhhhh-------hCCCe
Q psy15555        115 PDQVINFVYLYRRK-FVE-ASLYPYFTLLGQSIGSMILGVEALL--SFQPDIYIDTMGYAFTYPLFSY-------IGGSK  183 (488)
Q Consensus       115 ~~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~~~~~-------~~~~~  183 (488)
                      ..+ +.+..+.... +.. ...+....-..++..+...+..+++  .++|||||++.......+.+..       ..++|
T Consensus       662 ~~G-V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p  740 (1036)
T PLN02316        662 VEG-LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR  740 (1036)
T ss_pred             ECC-cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCC
Confidence            112 4444444321 111 1112111111122222223333333  3589999998644444443321       23578


Q ss_pred             eEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-
Q psy15555        184 VACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-  262 (488)
Q Consensus       184 ~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-  262 (488)
                      ++.++|.....                     .+                ..+..+..+|.|+++|+..++.+...+.. 
T Consensus       741 ~V~TiHnl~~~---------------------~n----------------~lk~~l~~AD~ViTVS~tya~EI~~~~~l~  783 (1036)
T PLN02316        741 VVFTIHNLEFG---------------------AN----------------HIGKAMAYADKATTVSPTYSREVSGNSAIA  783 (1036)
T ss_pred             EEEEeCCcccc---------------------hh----------------HHHHHHHHCCEEEeCCHHHHHHHHhccCcc
Confidence            99999953200                     00                11235577999999999999998875432 


Q ss_pred             --CCceEEEcCCCCchhhhccCCC---------------------------CC-CCCeEEEEeeccCCCCChHHHHHHHH
Q psy15555        263 --QLKTYKLYPPCDTEDLKKITHS---------------------------KT-DGPVKIISVAQFRPEKDHPLQLRAMY  312 (488)
Q Consensus       263 --~~k~~vi~~~~d~~~~~~~~~~---------------------------~~-~~~~~i~~~g~~~~~k~~~~ll~a~~  312 (488)
                        ..|+.+|+||+|.+.+.+....                           .+ .+.++++++||+.++||++.+++|+.
T Consensus       784 ~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~  863 (1036)
T PLN02316        784 PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIW  863 (1036)
T ss_pred             cccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHH
Confidence              2589999999998776543210                           11 25689999999999999999999999


Q ss_pred             HhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC--CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCC
Q psy15555        313 QLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL--ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFG  390 (488)
Q Consensus       313 ~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l--~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g  390 (488)
                      .+.+       .+++|+|+|+||+.   .+.++++++++++++  +++|.|.+..+......+|+.||+|++||..|++|
T Consensus       864 ~ll~-------~~~qlVIvG~Gpd~---~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~~EP~G  933 (1036)
T PLN02316        864 RTLE-------RNGQVVLLGSAPDP---RIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCG  933 (1036)
T ss_pred             HHhh-------cCcEEEEEeCCCCH---HHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCcccCcc
Confidence            9864       47899999999754   455788888988865  56899888764433458999999999999999999


Q ss_pred             ccHHHHHHcCCcEEEeCCCCCccceeccCCCc---------cccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy15555        391 IGIVECMAAGLIMIAHKSGGPKMDIVIEDPET---------CRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVS  459 (488)
Q Consensus       391 ~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~---------~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~  459 (488)
                      ++.+|||++|+|+|+++.||.. |+|.+++..         ..+|++++  |+++++.+|.+++...++.+..+++.+++
T Consensus       934 LvqLEAMa~GtppVvs~vGGL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~ 1012 (1036)
T PLN02316        934 LTQLTAMRYGSIPVVRKTGGLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKR 1012 (1036)
T ss_pred             HHHHHHHHcCCCeEEEcCCCcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence            9999999999999999999997 887764110         25899987  89999999999998224667777888888


Q ss_pred             HH-hhcCHHHHHHHHHHHHHHhh
Q psy15555        460 SV-DRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       460 ~~-~~~s~~~~~~~~~~~~~~~~  481 (488)
                      .+ ++|||+..+++|+++|+.+.
T Consensus      1013 ~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316       1013 VMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred             HHHhhCCHHHHHHHHHHHHHHHh
Confidence            87 88999999999999999875

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=6.3e-34  Score=274.42  Aligned_cols=286  Identities=16%  Similarity=0.146  Sum_probs=219.8

Q ss_pred             HHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEE-EeCCccchHHHHHHHhhhhcccCccccccCccchhhh
Q psy15555        147 SMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACY-IHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFK  224 (488)
Q Consensus       147 ~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~-~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (488)
                      ........+++.+|||||.+...++.+. ++++..+.|+++. .|. . ..                    .     ..+
T Consensus       268 ~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~-~-~~--------------------~-----~~~  320 (578)
T PRK15490        268 GIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRG-L-PP--------------------V-----VRK  320 (578)
T ss_pred             HHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecc-c-CC--------------------c-----chh
Confidence            3445667889999999998876665443 3344678888654 442 1 00                    0     000


Q ss_pred             HHHHHHHHHHHH--HHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccCC-----------CCCCCCe
Q psy15555        225 LFYYKVFALLYS--HVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKITH-----------SKTDGPV  290 (488)
Q Consensus       225 ~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~~-----------~~~~~~~  290 (488)
                      ......+....+  .+...+| +++.|...++.+.+.++.+ +|+.+||||+|.+.+.+...           ..+.+.+
T Consensus       321 r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~  399 (578)
T PRK15490        321 RLFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADT  399 (578)
T ss_pred             hHHHHHHHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCc
Confidence            111111111111  1234455 7788888889888766544 58999999999876655321           1123557


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      +++++|++.+.|+...+++++.++.++.     |+++|+|+|+|+..      +++++.++++++.++|.|.|+.  +++
T Consensus       400 vIg~VgRl~~~Kg~~~LI~A~a~llk~~-----pdirLvIVGdG~~~------eeLk~la~elgL~d~V~FlG~~--~Dv  466 (578)
T PRK15490        400 TIGGVFRFVGDKNPFAWIDFAARYLQHH-----PATRFVLVGDGDLR------AEAQKRAEQLGILERILFVGAS--RDV  466 (578)
T ss_pred             EEEEEEEEehhcCHHHHHHHHHHHHhHC-----CCeEEEEEeCchhH------HHHHHHHHHcCCCCcEEECCCh--hhH
Confidence            8999999999999999999999988877     89999999998643      7899999999999999999996  899


Q ss_pred             HHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHH---HHHHcc
Q psy15555        371 KKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTI---KLILHL  445 (488)
Q Consensus       371 ~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i---~~ll~~  445 (488)
                      ..+|+.+|+|++||..|+||++++|||++|+|||+++.+|.. |++.++    .+|++++  |.+++++++   ..+.. 
T Consensus       467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~-EiV~dG----~nG~LVp~~D~~aLa~ai~lA~aL~~-  540 (578)
T PRK15490        467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSA-ECFIEG----VSGFILDDAQTVNLDQACRYAEKLVN-  540 (578)
T ss_pred             HHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcH-HHcccC----CcEEEECCCChhhHHHHHHHHHHHHH-
Confidence            999999999999999999999999999999999999999997 999888    9999987  677777766   44454 


Q ss_pred             CHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHH
Q psy15555        446 SQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       446 ~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~  479 (488)
                      ..+.+..++++|++.+ ++||++.++++|.++|++
T Consensus       541 ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~  575 (578)
T PRK15490        541 LWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS  575 (578)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence            5555667999999999 899999999999999875

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-34  Score=281.99  Aligned_cols=353  Identities=16%  Similarity=0.129  Sum_probs=257.0

Q ss_pred             EEEEeccCCCC--CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         54 TVAFFHPYCNA--GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        54 rI~~~~~~~~~--~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      ||+++..++..  .||+++++..++++|.+.++.+.+++...............             ...    ......
T Consensus         1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~-------------~~~----~~~~~~   63 (365)
T cd03809           1 RILIDARFLASRRPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAA-------------LRL----LLRLPR   63 (365)
T ss_pred             CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhc-------------ccc----cccccc
Confidence            57887777665  78999999999999999876666665554432211100000             000    000000


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ......      .....+.........+||++|.+.......    ...++|++..+|......                
T Consensus        64 ~~~~~~------~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~----~~~~~~~i~~~hd~~~~~----------------  117 (365)
T cd03809          64 RLLWGL------LFLLRAGDRLLLLLLGLDLLHSPHNTAPLL----RLRGVPVVVTIHDLIPLR----------------  117 (365)
T ss_pred             ccccch------hhHHHHHHHHHhhhcCCCeeeecccccCcc----cCCCCCEEEEeccchhhh----------------
Confidence            000010      011112233344557899999776444433    367889999998542100                


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCC------C
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITH------S  284 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~------~  284 (488)
                          .   ...........+...++.+++.+|.++++|+.+++.+.+.++. +.++.+++|++|...+.....      .
T Consensus       118 ----~---~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~  190 (365)
T cd03809         118 ----F---PEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRAL  190 (365)
T ss_pred             ----C---cccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHh
Confidence                0   0001111234445567778899999999999999999998763 358999999999877654321      2


Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ...++++++++|++.+.||++.+++++..+.+..     ++++++++|.++...     ....+..++.+..++|++.|.
T Consensus       191 ~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~-----~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~g~  260 (365)
T cd03809         191 YLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKG-----PDPKLVIVGKRGWLN-----EELLARLRELGLGDRVRFLGY  260 (365)
T ss_pred             cCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhc-----CCCCEEEecCCcccc-----HHHHHHHHHcCCCCeEEECCC
Confidence            3356789999999999999999999999999876     689999999876432     333333366778899999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLI  442 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~l  442 (488)
                      ++.+|+..+|+.||+++.||..|++|++++|||++|+|||+++.++.. |++.++      |++++  |.++++++|.++
T Consensus       261 ~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~-e~~~~~------~~~~~~~~~~~~~~~i~~l  333 (365)
T cd03809         261 VSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLP-EVAGDA------ALYFDPLDPEALAAAIERL  333 (365)
T ss_pred             CChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCcc-ceecCc------eeeeCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998886 887654      55543  899999999999


Q ss_pred             HccCHHHHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy15555        443 LHLSQDTKTRISQNAVSSVDRFSMEEFKNGFL  474 (488)
Q Consensus       443 l~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  474 (488)
                      ++ |++.+.++++++++.+++|||+.+++++.
T Consensus       334 ~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~  364 (365)
T cd03809         334 LE-DPALREELRERGLARAKRFSWEKTARRTL  364 (365)
T ss_pred             hc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence            98 99999999999998779999999999875

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=1.4e-33  Score=284.63  Aligned_cols=394  Identities=17%  Similarity=0.166  Sum_probs=256.5

Q ss_pred             cccEEEEeccCCC----------CCCCceehHHHHHHHH--------HHhCCCe--eEEEEeCCCCCChh-HHHHHhhhh
Q psy15555         51 VLKTVAFFHPYCN----------AGGGGERVLWTAVLAL--------HQKYPDY--KIYIYTGDVDASPS-EIIKRAHQR  109 (488)
Q Consensus        51 ~~~rI~~~~~~~~----------~~gG~e~~~~~l~~~L--------~~~~~~~--~v~~~~~~~~~~~~-~~~~~~~~~  109 (488)
                      ..|||++++....          ..||...++.+++++|        +++|+++  +|.++|........ .+.+.....
T Consensus       254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~  333 (784)
T TIGR02470       254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKV  333 (784)
T ss_pred             ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccccccccccccc
Confidence            3489998764331          2567779999999985        5665432  67777775332111 000000000


Q ss_pred             cccccCCCeeEEEEeecccee---eccCchhHHHHHHHHHHHHHHHHHhh---hcCCcEEEecCCccchhh-hhhhhCCC
Q psy15555        110 FNIVLPDQVINFVYLYRRKFV---EASLYPYFTLLGQSIGSMILGVEALL---SFQPDIYIDTMGYAFTYP-LFSYIGGS  182 (488)
Q Consensus       110 ~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~pDiii~~~~~~~~~~-~~~~~~~~  182 (488)
                         ....+ +.++++|....-   -+.+.++..++-+.-.+...+.+.+.   ..+||+||.+....+... .++...++
T Consensus       334 ---~~~~~-~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgV  409 (784)
T TIGR02470       334 ---YGTEH-AWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGV  409 (784)
T ss_pred             ---cCCCc-eEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCC
Confidence               11123 666666644321   11112222211111111112222222   247999998864433333 33335689


Q ss_pred             eeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHH--HHHHHhcccCEEEEcChhHHH----HH
Q psy15555        183 KVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL--LYSHVGKYSDIIMVNSSWTEE----HV  256 (488)
Q Consensus       183 ~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ii~~s~~~~~----~~  256 (488)
                      |.+...|......       ..          ........... .+.....  -+..+++.||.||+.|.....    ..
T Consensus       410 P~v~t~HsL~~~K-------~~----------~~g~~~~~~e~-~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v  471 (784)
T TIGR02470       410 TQCTIAHALEKTK-------YP----------DSDIYWQEFED-KYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSV  471 (784)
T ss_pred             CEEEECCcchhhc-------cc----------ccccccccchh-HHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhh
Confidence            9888888432100       00          00000000000 1111111  144678899999999975422    22


Q ss_pred             HH-----------Hhc-------cCCceEEEcCCCCchhhhccCCC----------------------------CCCCCe
Q psy15555        257 IQ-----------LWN-------CQLKTYKLYPPCDTEDLKKITHS----------------------------KTDGPV  290 (488)
Q Consensus       257 ~~-----------~~~-------~~~k~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~  290 (488)
                      .+           +++       .+.|+.+++||+|...|.+....                            ...+++
T Consensus       472 ~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kp  551 (784)
T TIGR02470       472 GQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKP  551 (784)
T ss_pred             hhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCc
Confidence            21           111       23588999999998876553210                            124668


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC---Cc---HHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE---ED---EVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~---~~---~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      +++++||+.+.||++.+++|+.++....     ++++|+|+|+++..   .+   .+..+++.++++++++.++|.|+|.
T Consensus       552 iIl~VGRL~~~KGid~LIeA~~~l~~l~-----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~  626 (784)
T TIGR02470       552 IIFSMARLDRVKNLTGLVECYGRSPKLR-----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGA  626 (784)
T ss_pred             EEEEEeCCCccCCHHHHHHHHHHhHhhC-----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccC
Confidence            9999999999999999999998876543     57899999987531   11   1255788889999999999999997


Q ss_pred             C-ChHHHHHHHH----hCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHH
Q psy15555        365 L-PYEDMKKEFS----EGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQ  437 (488)
Q Consensus       365 ~-~~~el~~~~~----~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~  437 (488)
                      . +..++.++|+    .+|+||.||..|+||++++|||+||+|||+++.||+. |++.++    .+|++++  |++++++
T Consensus       627 ~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~-EiV~dg----~tGfLVdp~D~eaLA~  701 (784)
T TIGR02470       627 QLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPL-EIIQDG----VSGFHIDPYHGEEAAE  701 (784)
T ss_pred             cCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCC----CcEEEeCCCCHHHHHH
Confidence            5 5556666664    3479999999999999999999999999999999997 999988    8999987  8999999


Q ss_pred             HHHHHH----ccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHH
Q psy15555        438 TIKLIL----HLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       438 ~i~~ll----~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~  477 (488)
                      +|.+++    . |++.+++++++|++.+ ++|||+.++++++++.
T Consensus       702 aL~~ll~kll~-dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~  745 (784)
T TIGR02470       702 KIVDFFEKCDE-DPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA  745 (784)
T ss_pred             HHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999875    5 8999999999999998 9999999999998775

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.1e-34  Score=278.03  Aligned_cols=350  Identities=17%  Similarity=0.140  Sum_probs=248.8

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+|++++.+..||.++++..++++|.++++++.++...........  ...    .     .. .... .... .    
T Consensus         1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~--~~~----~-----~~-~~~~-~~~~-~----   62 (366)
T cd03822           1 RIALVSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLY--GGE----Q-----EV-VRVI-VLDN-P----   62 (366)
T ss_pred             CeEEecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccC--CCc----c-----cc-eeee-ecCC-c----
Confidence            68999988777889999999999999999666655554433211100  000    0     00 0000 0000 0    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccc----hhhhhh---hhCCCeeEEEEeCCccchHHHHHHHhhhh
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAF----TYPLFS---YIGGSKVACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~----~~~~~~---~~~~~~~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                                  .......+.++..+||+||.+...+.    ....+.   ...++|++..+|....             
T Consensus        63 ------------~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------  117 (366)
T cd03822          63 ------------LDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLL-------------  117 (366)
T ss_pred             ------------hhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCc-------------
Confidence                        01123556778889999886542211    111111   1378999999996410             


Q ss_pred             cccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC---
Q psy15555        207 THNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH---  283 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~---  283 (488)
                               ..  ..       .....+.+..++.+|.++++|....+.+..... +.++.+++|+++...+.....   
T Consensus       118 ---------~~--~~-------~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~  178 (366)
T cd03822         118 ---------HE--PR-------PGDRALLRLLLRRADAVIVMSSELLRALLLRAY-PEKIAVIPHGVPDPPAEPPESLKA  178 (366)
T ss_pred             ---------cc--cc-------hhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhcC-CCcEEEeCCCCcCcccCCchhhHh
Confidence                     00  00       011223445678899999996333333332222 358999999998766544321   


Q ss_pred             -CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        284 -SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       284 -~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                       ....++++++++|++.+.||++.+++|++.+.++.     ++++++++|+++....... ....++++++++.++|+++
T Consensus       179 ~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~-----~~~~l~i~G~~~~~~~~~~-~~~~~~i~~~~~~~~v~~~  252 (366)
T cd03822         179 LGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKH-----PDVRLLVAGETHPDLERYR-GEAYALAERLGLADRVIFI  252 (366)
T ss_pred             hcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhC-----CCeEEEEeccCccchhhhh-hhhHhHHHhcCCCCcEEEe
Confidence             13346789999999999999999999999999887     8999999998864311110 1111347788888999999


Q ss_pred             cC-CChHHHHHHHHhCcEEEEcCCCC--cCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHH
Q psy15555        363 VN-LPYEDMKKEFSEGLIGLHAMWNE--HFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQ  437 (488)
Q Consensus       363 g~-~~~~el~~~~~~ad~~v~~s~~e--~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~  437 (488)
                      |. ++.+++..+|+.||+++.||..|  ++|.+++|||++|+|||+++.++ . +.+.+.    .+|++++  |.+++++
T Consensus       253 ~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~-~~i~~~----~~g~~~~~~d~~~~~~  326 (366)
T cd03822         253 NRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-A-EEVLDG----GTGLLVPPGDPAALAE  326 (366)
T ss_pred             cCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-h-heeeeC----CCcEEEcCCCHHHHHH
Confidence            87 89999999999999999999999  99999999999999999999988 5 555555    6888875  8999999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +|.++++ +++.+.++++++++.+++|||+.+++++.++++
T Consensus       327 ~l~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  366 (366)
T cd03822         327 AIRRLLA-DPELAQALRARAREYARAMSWERVAERYLRLLA  366 (366)
T ss_pred             HHHHHHc-ChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence            9999999 999999999999999966999999999998873

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.3e-34  Score=276.07  Aligned_cols=344  Identities=21%  Similarity=0.220  Sum_probs=251.3

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++.+.....||.++.+..++++|.+.+  ++|.+++........         +  ..... +.+..++.....   
T Consensus         1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~---------~--~~~~~-~~~~~~~~~~~~---   63 (348)
T cd03820           1 KILFVIPSLGNAGGAERVLSNLANALAEKG--HEVTIISLDKGEPPF---------Y--ELDPK-IKVIDLGDKRDS---   63 (348)
T ss_pred             CeEEEeccccCCCChHHHHHHHHHHHHhCC--CeEEEEecCCCCCCc---------c--ccCCc-cceeeccccccc---
Confidence            688888877767889999999999999874  555555544322000         0  01111 223222221110   


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCC-CeeEEEEeCCccchHHHHHHHhhhhcccCcc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGG-SKVACYIHYPTITKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~-~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~  212 (488)
                            .....+.......+.++..+||+++.+..+...+ ......+ +|++.+.|......                 
T Consensus        64 ------~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~-----------------  119 (348)
T cd03820          64 ------KLLARFKKLRRLRKLLKNNKPDVVISFLTSLLTF-LASLGLKIVKLIVSEHNSPDAY-----------------  119 (348)
T ss_pred             ------chhccccchHHHHHhhcccCCCEEEEcCchHHHH-HHHHhhccccEEEecCCCccch-----------------
Confidence                  0000111123466678889999998776542111 1112334 48888888543111                 


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEE
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI  292 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i  292 (488)
                                ...   .......+..++.+|.+++.|+.++....  .....++.+++|+++...+...   ...+++.+
T Consensus       120 ----------~~~---~~~~~~~~~~~~~~d~ii~~s~~~~~~~~--~~~~~~~~vi~~~~~~~~~~~~---~~~~~~~i  181 (348)
T cd03820         120 ----------KKR---LRRLLLRRLLYRRADAVVVLTEEDRALYY--KKFNKNVVVIPNPLPFPPEEPS---SDLKSKRI  181 (348)
T ss_pred             ----------hhh---hHHHHHHHHHHhcCCEEEEeCHHHHHHhh--ccCCCCeEEecCCcChhhcccc---CCCCCcEE
Confidence                      000   00111456678899999999999983222  3334689999999987765443   23567899


Q ss_pred             EEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHH
Q psy15555        293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       293 ~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~  372 (488)
                      +++|++.+.||++.++++++.+.+..     ++++++++|.++..      +.+++.+++.++.++|.+.|..  +++..
T Consensus       182 ~~~g~~~~~K~~~~l~~~~~~l~~~~-----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~--~~~~~  248 (348)
T cd03820         182 LAVGRLVPQKGFDLLIEAWAKIAKKH-----PDWKLRIVGDGPER------EALEALIKELGLEDRVILLGFT--KNIEE  248 (348)
T ss_pred             EEEEeeccccCHHHHHHHHHHHHhcC-----CCeEEEEEeCCCCH------HHHHHHHHHcCCCCeEEEcCCc--chHHH
Confidence            99999999999999999999998776     89999999998643      6677788888988999999984  89999


Q ss_pred             HHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHH
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTK  450 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~  450 (488)
                      +|+.||+++.||..|++|++++|||++|+|||+++.++..++++.++    .+|++++  |+++++++|.++++ |++.+
T Consensus       249 ~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~i~~ll~-~~~~~  323 (348)
T cd03820         249 YYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDG----VNGLLVPNGDVEALAEALLRLME-DEELR  323 (348)
T ss_pred             HHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccC----cceEEeCCCCHHHHHHHHHHHHc-CHHHH
Confidence            99999999999999999999999999999999999765545777766    6899886  78999999999999 99999


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHH
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFL  474 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~  474 (488)
                      +++++++++.+++|+|++++++|.
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~  347 (348)
T cd03820         324 KRMGANARESAERFSIENIIKQWE  347 (348)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHhc
Confidence            999999987779999999999875

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-33  Score=275.97  Aligned_cols=365  Identities=15%  Similarity=0.112  Sum_probs=241.5

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      ++|++++...   .+|.+..+..++++|.++||++.++.....  ....+...          ... +.+..++......
T Consensus         3 ~~~~~~~~~~---~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~--~~~~~~~~----------~~~-v~~~~~~~~~~~~   66 (415)
T cd03816           3 RKRVCVLVLG---DIGRSPRMQYHALSLAKHGWKVDLVGYLET--PPHDEILS----------NPN-ITIHPLPPPPQRL   66 (415)
T ss_pred             ccEEEEEEec---ccCCCHHHHHHHHHHHhcCceEEEEEecCC--CCCHHHhc----------CCC-EEEEECCCCcccc
Confidence            4577766532   345776668899999999655555543322  21111110          122 5555554432000


Q ss_pred             ccCchhHHHHHHHHHHH-HHHHHHhhhcCCcEEEecCCccchh---h-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhh
Q psy15555        132 ASLYPYFTLLGQSIGSM-ILGVEALLSFQPDIYIDTMGYAFTY---P-LFSYIGGSKVACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~pDiii~~~~~~~~~---~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                      ......+......+... ...+..++..+||+||.+...+...   . +++...+.|+++..|....     ... .   
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~-----~~~-~---  137 (415)
T cd03816          67 NKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGY-----TIL-A---  137 (415)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchH-----HHH-h---
Confidence            01111111111111111 2222345567899998765333211   1 2233568899998884310     000 0   


Q ss_pred             cccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC---
Q psy15555        207 THNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH---  283 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~---  283 (488)
                               ..  .. ......+...++++.+.+.+|.++++|+.+++.+.+.+..++++.+++|+. ...+.+...   
T Consensus       138 ---------~~--~~-~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~-~~~f~p~~~~~~  204 (415)
T cd03816         138 ---------LK--LG-ENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRP-PEQFRPLPLEEK  204 (415)
T ss_pred             ---------cc--cC-CCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCC-HHHceeCcHHHH
Confidence                     00  00 011123455667778889999999999999999988444456899999983 333332110   


Q ss_pred             ----------------------CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhh-hccCceEEEEEecCCCCCcH
Q psy15555        284 ----------------------SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISE-ELWDNLKLIFIGSTRNEEDE  340 (488)
Q Consensus       284 ----------------------~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~-~~~~~~~l~ivG~~~~~~~~  340 (488)
                                            ...++..+++++|++.+.||++.+++|++.+.+...+ ...|+++|+|+|+|+..   
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~---  281 (415)
T cd03816         205 HELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLK---  281 (415)
T ss_pred             HHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccH---
Confidence                                  0123456788899999999999999999999753100 00157999999999743   


Q ss_pred             HHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcC---CCCcCCccHHHHHHcCCcEEEeCCCCCccceec
Q psy15555        341 VCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM---WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI  417 (488)
Q Consensus       341 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s---~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~  417 (488)
                         ++++++++++++.+.+.+.|+++.+++..+|+.||+++.++   ..+++|++++||||||+|||+++.++.. |+++
T Consensus       282 ---~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~-eiv~  357 (415)
T cd03816         282 ---EKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCID-ELVK  357 (415)
T ss_pred             ---HHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHH-HHhc
Confidence               88999999999875444557899999999999999988643   3477999999999999999999999886 9999


Q ss_pred             cCCCccccceecCCHHHHHHHHHHHHccC---HHHHHHHHHHHHHHHhhcCHH
Q psy15555        418 EDPETCRNGFLACDEVEYAQTIKLILHLS---QDTKTRISQNAVSSVDRFSME  467 (488)
Q Consensus       418 ~~~~~~~~g~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~a~~~~~~~s~~  467 (488)
                      ++    .+|++++|+++++++|.++++ |   ++.+++|++++++.. +++|+
T Consensus       358 ~~----~~G~lv~d~~~la~~i~~ll~-~~~~~~~~~~m~~~~~~~~-~~~~~  404 (415)
T cd03816         358 HG----ENGLVFGDSEELAEQLIDLLS-NFPNRGKLNSLKKGAQEES-ELRWD  404 (415)
T ss_pred             CC----CCEEEECCHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHhh-hcCHH
Confidence            88    899999999999999999999 7   899999999998766 33344

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-33  Score=275.17  Aligned_cols=352  Identities=11%  Similarity=0.078  Sum_probs=243.1

Q ss_pred             EEEEecc--CCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         54 TVAFFHP--YCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        54 rI~~~~~--~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      ||+++..  .....||.++++.+++++|.++|+++.|  .+........   .        ....+ +.+..++....  
T Consensus         1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g~~v~v--~~~~~~~~~~---~--------~~~~~-i~~~~~~~~~~--   64 (363)
T cd04955           1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARGHEVTV--YCRSPYPKQK---E--------TEYNG-VRLIHIPAPEI--   64 (363)
T ss_pred             CeEEEecCcCCcccCcHHHHHHHHHHHHHhcCCCEEE--EEccCCCCCc---c--------cccCC-ceEEEcCCCCc--
Confidence            5788754  3456789999999999999999655554  4443222111   0        00022 55555544321  


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHh-hhcCCcEEEecCCcc-chhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEAL-LSFQPDIYIDTMGYA-FTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~pDiii~~~~~~-~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                       ......   ...+   ....+.+ ++.++|++|...... .....++ ..+.|++...|.....               
T Consensus        65 -~~~~~~---~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~---------------  121 (363)
T cd04955          65 -GGLGTI---IYDI---LAILHALFVKRDIDHVHALGPAIAPFLPLLR-LKGKKVVVNMDGLEWK---------------  121 (363)
T ss_pred             -cchhhh---HHHH---HHHHHHHhccCCeEEEEecCccHHHHHHHHH-hcCCCEEEEccCccee---------------
Confidence             000000   0001   1112222 345566666554322 1112222 3478888888753210               


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhc-cC---CCC
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKK-IT---HSK  285 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~-~~---~~~  285 (488)
                            ..    .......+.+...++...+.+|.++++|+..++.+.+.++.+  ..+++|++|...+.+ ..   ...
T Consensus       122 ------~~----~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~--~~~i~ngv~~~~~~~~~~~~~~~~  189 (363)
T cd04955         122 ------RA----KWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYGRD--STYIPYGADHVVSSEEDEILKKYG  189 (363)
T ss_pred             ------ec----ccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcCCC--CeeeCCCcChhhcchhhhhHHhcC
Confidence                  00    000111233444566678899999999999999997777754  389999999776543 11   111


Q ss_pred             CCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHH-hcCCCCcEEEecC
Q psy15555        286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK-HLSLENNVEFKVN  364 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~  364 (488)
                      ..++..++++|++.+.||++.+++|++++.        ++++|+++|.++..      +.+.+.++ ..+..++|+++|+
T Consensus       190 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~l~ivG~~~~~------~~~~~~~~~~~~~~~~V~~~g~  255 (363)
T cd04955         190 LEPGRYYLLVGRIVPENNIDDLIEAFSKSN--------SGKKLVIVGNADHN------TPYGKLLKEKAAADPRIIFVGP  255 (363)
T ss_pred             CCCCcEEEEEecccccCCHHHHHHHHHhhc--------cCceEEEEcCCCCc------chHHHHHHHHhCCCCcEEEccc
Confidence            123456889999999999999999999874        46899999998643      23333333 5666789999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCC-CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWN-EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLIL  443 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~-e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll  443 (488)
                      ++++|+.++|+.||+++.||.. |++|.+++|||++|+|||+++.++.. |++++.      |.++++.+.+++++.+++
T Consensus       256 ~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~------g~~~~~~~~l~~~i~~l~  328 (363)
T cd04955         256 IYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNR-EVLGDK------AIYFKVGDDLASLLEELE  328 (363)
T ss_pred             cChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccc-eeecCC------eeEecCchHHHHHHHHHH
Confidence            9999999999999999999988 99999999999999999999999886 887654      777664444999999999


Q ss_pred             ccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        444 HLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       444 ~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      + +++.+.++++++++.+ ++|||+.+++++.++|+
T Consensus       329 ~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~  363 (363)
T cd04955         329 A-DPEEVSAMAKAARERIREKYTWEKIADQYEELYK  363 (363)
T ss_pred             h-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            9 9999999999999998 78999999999999874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=2.1e-33  Score=272.58  Aligned_cols=362  Identities=21%  Similarity=0.211  Sum_probs=269.6

Q ss_pred             EEEEeccCCCCC-CCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCNAG-GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~~-gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++++..... ||+...+..++++|.+.  +++|.+++.............          .  ......        
T Consensus         1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~i~~~~~~~~~~~~~~~----------~--~~~~~~--------   58 (374)
T cd03801           1 KILLVTPEYPPSVGGAERHVLELARALAAR--GHEVTVLTPGDGGLPDEEEVG----------G--IVVVRP--------   58 (374)
T ss_pred             CeeEEecccCCccCcHhHHHHHHHHHHHhc--CceEEEEecCCCCCCceeeec----------C--cceecC--------
Confidence            688888777666 78999999999999987  455555555432211100000          0  000000        


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ....................+.++..+||+|+.+........ ......++|++...|......                
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------  122 (374)
T cd03801          59 PPLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGR----------------  122 (374)
T ss_pred             CcccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhc----------------
Confidence            000001111111222344556778889999987764444332 233467899999999654211                


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhcc------CCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKI------THS  284 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~------~~~  284 (488)
                          .   .. .............+..++.+|.+++.|+.+++.+.+.++.+ .++.+++|+++...+.+.      ...
T Consensus       123 ----~---~~-~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd03801         123 ----P---GN-ELGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLG  194 (374)
T ss_pred             ----c---cc-chhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcC
Confidence                0   00 01222334444566788899999999999999999977754 589999999988776432      222


Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ...++++++++|++...||++.+++++..+.++.     ++++++++|.++      ..+.+++.+++.+..++|.+.|.
T Consensus       195 ~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~-----~~~~l~i~G~~~------~~~~~~~~~~~~~~~~~v~~~g~  263 (374)
T cd03801         195 IPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEY-----PDVRLVIVGDGP------LREELEALAAELGLGDRVTFLGF  263 (374)
T ss_pred             CcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhc-----CCeEEEEEeCcH------HHHHHHHHHHHhCCCcceEEEec
Confidence            3356789999999999999999999999998877     799999999763      34777888888888899999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLI  442 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~l  442 (488)
                      ++.+|+..+|+.||+++.|+..|++|++++|||++|+|||+++.++.. +++.++    .+|++++  |+++++++|.++
T Consensus       264 ~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~-~~~~~~----~~g~~~~~~~~~~l~~~i~~~  338 (374)
T cd03801         264 VPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIP-EVVEDG----ETGLLVPPGDPEALAEAILRL  338 (374)
T ss_pred             cChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChh-HHhcCC----cceEEeCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998886 888877    7899877  689999999999


Q ss_pred             HccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        443 LHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       443 l~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      +. +++.+.++++++++.. +.|+|+.+++++.++++
T Consensus       339 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (374)
T cd03801         339 LD-DPELRRRLGEAARERVAERFSWDRVAARTEEVYY  374 (374)
T ss_pred             Hc-ChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence            99 9999999999999777 99999999999998873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=1.5e-33  Score=272.98  Aligned_cols=342  Identities=16%  Similarity=0.196  Sum_probs=254.7

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++++.++.  |+++.++.++++|.++|+++.  +++.......... ...    . .  .. ....      +    
T Consensus         1 ki~~~~~~~~~--~~~~~~~~~~~~L~~~g~~v~--v~~~~~~~~~~~~-~~~----~-~--~~-~~~~------~----   57 (355)
T cd03799           1 KIAYLVKEFPR--LSETFILREILALEAAGHEVE--IFSLRPPEDTLVH-PED----R-A--EL-ARTR------Y----   57 (355)
T ss_pred             CEEEECCCCCC--cchHHHHHHHHHHHhCCCeEE--EEEecCccccccc-ccc----c-c--cc-cchH------H----
Confidence            68998877643  388999999999999954444  4444322211000 000    0 0  00 0000      0    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccch-hh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT-YP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~-~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                          .......+.......+.+++.+||+||.+...... .. ......+.|++...|......                
T Consensus        58 ----~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------  117 (355)
T cd03799          58 ----LARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR----------------  117 (355)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc----------------
Confidence                01111112222334455677899999977542222 22 222234788888888543111                


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-cCCceEEEcCCCCchhhhccCCCCCCCCe
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-CQLKTYKLYPPCDTEDLKKITHSKTDGPV  290 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~k~~vi~~~~d~~~~~~~~~~~~~~~~  290 (488)
                          ..   .   .       ..++..++.+|.++++|+..++.+.+.++ ...++.+++|++|.+.+.........++.
T Consensus       118 ----~~---~---~-------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~  180 (355)
T cd03799         118 ----SP---D---A-------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPL  180 (355)
T ss_pred             ----cC---c---h-------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCe
Confidence                00   0   0       23445678899999999999999999743 34589999999998877654322335678


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      .++++|++.+.||++.+++++..+.++.     ++++++++|.++..      +++++.+++.++.++|.+.|.++.+|+
T Consensus       181 ~i~~~g~~~~~k~~~~l~~~~~~l~~~~-----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~~~~~l  249 (355)
T cd03799         181 RILSVGRLVEKKGLDYLLEALALLKDRG-----IDFRLDIVGDGPLR------DELEALIAELGLEDRVTLLGAKSQEEV  249 (355)
T ss_pred             EEEEEeeeccccCHHHHHHHHHHHhhcC-----CCeEEEEEECCccH------HHHHHHHHHcCCCCeEEECCcCChHHH
Confidence            8999999999999999999999998876     79999999998644      678888888888899999999999999


Q ss_pred             HHHHHhCcEEEEcCCC------CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHH
Q psy15555        371 KKEFSEGLIGLHAMWN------EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLI  442 (488)
Q Consensus       371 ~~~~~~ad~~v~~s~~------e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~l  442 (488)
                      ..+|+.||+++.||..      |++|.+++|||++|+|||+++.++.. ++++++    .+|++++  |+++++++|.++
T Consensus       250 ~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-~~i~~~----~~g~~~~~~~~~~l~~~i~~~  324 (355)
T cd03799         250 RELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIP-ELVEDG----ETGLLVPPGDPEALADAIERL  324 (355)
T ss_pred             HHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcc-hhhhCC----CceEEeCCCCHHHHHHHHHHH
Confidence            9999999999999988      99999999999999999999998886 899887    7899886  899999999999


Q ss_pred             HccCHHHHHHHHHHHHHHH-hhcCHHHHHHH
Q psy15555        443 LHLSQDTKTRISQNAVSSV-DRFSMEEFKNG  472 (488)
Q Consensus       443 l~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~  472 (488)
                      ++ +++.+.++++++++.+ ++|||+..+++
T Consensus       325 ~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~  354 (355)
T cd03799         325 LD-DPELRREMGEAGRARVEEEFDIRKQAAR  354 (355)
T ss_pred             Hh-CHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence            99 9999999999999998 89999998875

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.4e-33  Score=272.06  Aligned_cols=350  Identities=21%  Similarity=0.229  Sum_probs=257.6

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++.+.... ||+++++..++++|.+.++++.++.....  .........          .+ +.+..++....    
T Consensus         1 ~i~~i~~~~~~-gG~~~~~~~l~~~l~~~~~~v~~~~~~~~--~~~~~~~~~----------~~-i~v~~~~~~~~----   62 (365)
T cd03807           1 KVLHVITGLDV-GGAERMLVRLLKGLDRDRFEHVVISLTDR--GELGEELEE----------AG-VPVYCLGKRPG----   62 (365)
T ss_pred             CeEEEEeeccC-ccHHHHHHHHHHHhhhccceEEEEecCcc--hhhhHHHHh----------cC-CeEEEEecccc----
Confidence            68888887766 77999999999999888555554443222  211111111          12 44444443322    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhh-CCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYI-GGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~-~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                       ...       +.......+.+++.+||+|+.+...+.... ..... .+.+++...|......                
T Consensus        63 -~~~-------~~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------  118 (365)
T cd03807          63 -RPD-------PGALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDL----------------  118 (365)
T ss_pred             -ccc-------HHHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccc----------------
Confidence             000       111233556778889999987654443332 22223 5778888777543110                


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC-------
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS-------  284 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~-------  284 (488)
                              .    .........+.+...+.+|.++++|+..++.+.+.+....++.+++|++|...+.+....       
T Consensus       119 --------~----~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~  186 (365)
T cd03807         119 --------G----KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPKKIVVIPNGVDTERFSPDLDARARLREE  186 (365)
T ss_pred             --------c----chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHcCCChhheeEeCCCcCHHhcCCcccchHHHHHh
Confidence                    0    011122334555677889999999999999999864444588999999997766543321       


Q ss_pred             --CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHH-hcCCCCcEEE
Q psy15555        285 --KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK-HLSLENNVEF  361 (488)
Q Consensus       285 --~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~  361 (488)
                        .+.+.+.++++|++.+.||++.+++|+..+.++.     ++++++++|.++..      +.+++... +.++.+++.+
T Consensus       187 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~-----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~~v~~  255 (365)
T cd03807         187 LGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKF-----PNARLLLVGDGPDR------ANLELLALKELGLEDKVIL  255 (365)
T ss_pred             cCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhC-----CCeEEEEecCCcch------hHHHHHHHHhcCCCceEEE
Confidence              2245688999999999999999999999998876     89999999998754      34444554 7788889999


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTI  439 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i  439 (488)
                      .|..  +|+..+|+.||+++.||..|++|++++|||++|+|||+++.++.. +++.+.      |++++  |+++++++|
T Consensus       256 ~g~~--~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~-e~~~~~------g~~~~~~~~~~l~~~i  326 (365)
T cd03807         256 LGER--SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNA-ELVGDT------GFLVPPGDPEALAEAI  326 (365)
T ss_pred             cccc--ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChH-HHhhcC------CEEeCCCCHHHHHHHH
Confidence            9976  899999999999999999999999999999999999999999886 777643      66654  899999999


Q ss_pred             HHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        440 KLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       440 ~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      .++++ +++.+.++++++++.+ ++|||+.+++++.++|+
T Consensus       327 ~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~  365 (365)
T cd03807         327 EALLA-DPALRQALGEAARERIEENFSIEAMVEAYEELYR  365 (365)
T ss_pred             HHHHh-ChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            99999 9999999999999999 88999999999999874

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-33  Score=274.20  Aligned_cols=328  Identities=17%  Similarity=0.180  Sum_probs=244.9

Q ss_pred             CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHHH
Q psy15555         65 GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQS  144 (488)
Q Consensus        65 ~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  144 (488)
                      .||+++++..++++|.++  +++|.+++....  .....+.          .. +.+...+....   ..+       ..
T Consensus         9 ~gG~e~~~~~l~~~L~~~--g~~v~v~~~~~~--~~~~~~~----------~~-~~~~~~~~~~~---~~~-------~~   63 (355)
T cd03819           9 SGGVERGTLELARALVER--GHRSLVASAGGR--LVAELEA----------EG-SRHIKLPFISK---NPL-------RI   63 (355)
T ss_pred             cCcHHHHHHHHHHHHHHc--CCEEEEEcCCCc--hHHHHHh----------cC-CeEEEcccccc---chh-------hh
Confidence            378999999999999998  566666655421  1111111          11 32322221110   001       01


Q ss_pred             HHHHHHHHHHhhhcCCcEEEecCCccchhhh-hhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhh
Q psy15555        145 IGSMILGVEALLSFQPDIYIDTMGYAFTYPL-FSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSF  223 (488)
Q Consensus       145 ~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~-~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      +.....+.+.+++.+||+||.+...+..... +....++|++...|....                          ..  
T Consensus        64 ~~~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--------------------------~~--  115 (355)
T cd03819          64 LLNVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYS--------------------------VN--  115 (355)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchh--------------------------hH--
Confidence            1122445667888999999977644433222 222457899988885320                          00  


Q ss_pred             hHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccCC------------CCCCCCe
Q psy15555        224 KLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKITH------------SKTDGPV  290 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~~------------~~~~~~~  290 (488)
                       .        .++..++.+|.+++.|+..++.+.+.++.+ .++.+++|++|.+.+.+...            ...++.+
T Consensus       116 -~--------~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (355)
T cd03819         116 -F--------RYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKP  186 (355)
T ss_pred             -H--------HHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCce
Confidence             0        122345678999999999999998666654 48999999999877654322            1245678


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      +++++|++.+.||.+.+++++..+.++.     ++++++++|.++..+  ...+.+.+.+++.++.++|.+.|+.  +|+
T Consensus       187 ~i~~~Gr~~~~Kg~~~li~~~~~l~~~~-----~~~~l~ivG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~g~~--~~~  257 (355)
T cd03819         187 VILLPGRLTRWKGQEVFIEALARLKKDD-----PDVHLLIVGDAQGRR--FYYAELLELIKRLGLQDRVTFVGHC--SDM  257 (355)
T ss_pred             EEEEeeccccccCHHHHHHHHHHHHhcC-----CCeEEEEEECCcccc--hHHHHHHHHHHHcCCcceEEEcCCc--ccH
Confidence            9999999999999999999999998876     799999999987442  4456677788888888899999995  899


Q ss_pred             HHHHHhCcEEEEcC-CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCH
Q psy15555        371 KKEFSEGLIGLHAM-WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQ  447 (488)
Q Consensus       371 ~~~~~~ad~~v~~s-~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~  447 (488)
                      ..+|+.||++++|| ..|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++|..++..++
T Consensus       258 ~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~-e~i~~~----~~g~~~~~~~~~~l~~~i~~~~~~~~  332 (355)
T cd03819         258 PAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGAR-ETVRPG----ETGLLVPPGDAEALAQALDQILSLLP  332 (355)
T ss_pred             HHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcH-HHHhCC----CceEEeCCCCHHHHHHHHHHHHhhCH
Confidence            99999999999999 8999999999999999999999998886 999887    7899875  99999999976665489


Q ss_pred             HHHHHHHHHHHHHH-hhcCHHH
Q psy15555        448 DTKTRISQNAVSSV-DRFSMEE  468 (488)
Q Consensus       448 ~~~~~~~~~a~~~~-~~~s~~~  468 (488)
                      +.+.+++++|++.+ ++||++.
T Consensus       333 ~~~~~~~~~a~~~~~~~f~~~~  354 (355)
T cd03819         333 EGRAKMFAKARMCVETLFSYDR  354 (355)
T ss_pred             HHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999 9999875

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.1e-34  Score=276.01  Aligned_cols=343  Identities=16%  Similarity=0.163  Sum_probs=248.5

Q ss_pred             EEEEeccCCCC-CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCNA-GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~-~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++.+...+ .||.++.+..++++|.++++++.++  +............           .. ..+..++.....  
T Consensus         1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~--~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~--   64 (357)
T cd03795           1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAARGIEVAVL--CASPEPKGRDEER-----------NG-HRVIRAPSLLNV--   64 (357)
T ss_pred             CeeEecCCCCCCCCcHHHHHHHHHHHHHhCCCceEEE--ecCCCCcchhhhc-----------cC-ceEEEeeccccc--
Confidence            57777766665 7889999999999999995555544  4432221111000           11 222222211111  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhh-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFS-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ........       ..... .++..+||++|.+..++....... ...+.|.+.+.|....                  
T Consensus        65 ~~~~~~~~-------~~~~~-~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------------  118 (357)
T cd03795          65 ASTPFSPS-------FFKQL-KKLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIV------------------  118 (357)
T ss_pred             ccccccHH-------HHHHH-HhcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhh------------------
Confidence            00000000       01011 155779999886654443322221 1347788888774321                  


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC------CC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH------SK  285 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~------~~  285 (488)
                              ..   ....+.+..+.+..++.+|.+++.|+...+.+...+..+.++.+++|++|...+.+...      ..
T Consensus       119 --------~~---~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~  187 (357)
T cd03795         119 --------KQ---KLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRR  187 (357)
T ss_pred             --------cc---chhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcC
Confidence                    00   01223344456668889999999999999988877665578999999999876654332      13


Q ss_pred             CCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ..++++++++|++.+.||++.+++|++++.         +++++++|+++..      +++++.+++.++.++|++.|++
T Consensus       188 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~---------~~~l~i~G~g~~~------~~~~~~~~~~~~~~~V~~~g~v  252 (357)
T cd03795         188 AAGRPFFLFVGRLVYYKGLDVLLEAAAALP---------DAPLVIVGEGPLE------AELEALAAALGLLDRVRFLGRL  252 (357)
T ss_pred             CCCCcEEEEecccccccCHHHHHHHHHhcc---------CcEEEEEeCChhH------HHHHHHHHhcCCcceEEEcCCC
Confidence            356789999999999999999999999873         5799999998633      6788888888888999999999


Q ss_pred             ChHHHHHHHHhCcEEEEcCC--CCcCCccHHHHHHcCCcEEEeCCCCCccceecc-CCCccccceecC--CHHHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMW--NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIE-DPETCRNGFLAC--DEVEYAQTIK  440 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~--~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~-~~~~~~~g~~~~--~~~~l~~~i~  440 (488)
                      +++++.++|+.||+++.||.  .|++|++++|||++|+|||+++.++.. +.+.+ +    .+|++++  |+++++++|.
T Consensus       253 ~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~-~~i~~~~----~~g~~~~~~d~~~~~~~i~  327 (357)
T cd03795         253 DDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG-SYVNLHG----VTGLVVPPGDPAALAEAIR  327 (357)
T ss_pred             CHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch-hHHhhCC----CceEEeCCCCHHHHHHHHH
Confidence            99999999999999999985  599999999999999999999998886 66654 6    7898875  8999999999


Q ss_pred             HHHccCHHHHHHHHHHHHHHH-hhcCHHHHH
Q psy15555        441 LILHLSQDTKTRISQNAVSSV-DRFSMEEFK  470 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~  470 (488)
                      ++++ +++.+++|++++++.+ ++||++.++
T Consensus       328 ~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~  357 (357)
T cd03795         328 RLLE-DPELRERLGEAARERAEEEFTADRMV  357 (357)
T ss_pred             HHHH-CHHHHHHHHHHHHHHHHHhcchHhhC
Confidence            9999 9999999999999999 999998763

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=1.6e-33  Score=280.41  Aligned_cols=396  Identities=15%  Similarity=0.116  Sum_probs=256.2

Q ss_pred             cEEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhccc---------ccCCCeeE
Q psy15555         53 KTVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNI---------VLPDQVIN  120 (488)
Q Consensus        53 ~rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~  120 (488)
                      |||++++..+.   ..||...++..|+++|+++|  ++|.+++...+...... .........         ...++ ++
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g-v~   76 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPAIREKL-RDAQVVGRLDLFTVLFGHLEGDG-VP   76 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcchhhhh-cCceEEEEeeeEEEEEEeEEcCC-ce
Confidence            79999876532   36789999999999999995  55555555433211110 000000000         01123 66


Q ss_pred             EEEeeccceeecc-CchhHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchhhhhhh-h-----CCCeeEEEEeCC
Q psy15555        121 FVYLYRRKFVEAS-LYPYFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTYPLFSY-I-----GGSKVACYIHYP  191 (488)
Q Consensus       121 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~~~~~-~-----~~~~~v~~~h~p  191 (488)
                      +..++.+.+..+. .+.......++.-+...+...+++  .+|||||.+......++.... .     .++|++.++|..
T Consensus        77 v~~v~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~  156 (466)
T PRK00654         77 VYLIDAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNL  156 (466)
T ss_pred             EEEEeCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCC
Confidence            6666554433321 121111111111111222333333  489999999744444443321 1     368999999975


Q ss_pred             ccch----HHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH-h------
Q psy15555        192 TITK----EMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL-W------  260 (488)
Q Consensus       192 ~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~------  260 (488)
                      ...-    +.....     .... .      .........+. ...+.+..+..+|.++++|+..++.+... +      
T Consensus       157 ~~~g~~~~~~~~~~-----~~~~-~------~~~~~~~~~~~-~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~  223 (466)
T PRK00654        157 AYQGLFPAEILGEL-----GLPA-E------AFHLEGLEFYG-QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEG  223 (466)
T ss_pred             cCCCcCCHHHHHHc-----CCCh-H------HcCchhhhcCC-cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHH
Confidence            4210    010000     0000 0      00000000000 01134456788999999999999888652 1      


Q ss_pred             ---ccCCceEEEcCCCCchhhhccCCC--------------------------C-CCCCeEEEEeeccCCCCChHHHHHH
Q psy15555        261 ---NCQLKTYKLYPPCDTEDLKKITHS--------------------------K-TDGPVKIISVAQFRPEKDHPLQLRA  310 (488)
Q Consensus       261 ---~~~~k~~vi~~~~d~~~~~~~~~~--------------------------~-~~~~~~i~~~g~~~~~k~~~~ll~a  310 (488)
                         ....|+.+|+||+|.+.+.+....                          . .++.++++++||+.++||++.+++|
T Consensus       224 ~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a  303 (466)
T PRK00654        224 LLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEA  303 (466)
T ss_pred             HHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHH
Confidence               124589999999999877653210                          1 1356899999999999999999999


Q ss_pred             HHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEE-ecCCChHHHHHHHHhCcEEEEcCCCCcC
Q psy15555        311 MYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF-KVNLPYEDMKKEFSEGLIGLHAMWNEHF  389 (488)
Q Consensus       311 ~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~el~~~~~~ad~~v~~s~~e~~  389 (488)
                      ++++.+       .+++|+|+|+|+.    .+.+++++++++++  .++.+ .|+ +.+.+..+|+.||++++||..|++
T Consensus       304 ~~~l~~-------~~~~lvivG~g~~----~~~~~l~~l~~~~~--~~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~  369 (466)
T PRK00654        304 LPELLE-------QGGQLVLLGTGDP----ELEEAFRALAARYP--GKVGVQIGY-DEALAHRIYAGADMFLMPSRFEPC  369 (466)
T ss_pred             HHHHHh-------cCCEEEEEecCcH----HHHHHHHHHHHHCC--CcEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCc
Confidence            999875       3789999998742    34577888888876  34654 555 556678999999999999999999


Q ss_pred             CccHHHHHHcCCcEEEeCCCCCccceeccCC--CccccceecC--CHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHhh
Q psy15555        390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDP--ETCRNGFLAC--DEVEYAQTIKLILHL--SQDTKTRISQNAVSSVDR  463 (488)
Q Consensus       390 g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~--~~~~~g~~~~--~~~~l~~~i~~ll~~--~~~~~~~~~~~a~~~~~~  463 (488)
                      |++++|||+||+|+|+++.+|.. |++.+++  .+..+|++++  |+++++++|.++++.  +++.+.++++++.+  ++
T Consensus       370 gl~~lEAma~G~p~V~~~~gG~~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~  446 (466)
T PRK00654        370 GLTQLYALRYGTLPIVRRTGGLA-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMA--QD  446 (466)
T ss_pred             hHHHHHHHHCCCCEEEeCCCCcc-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc--cC
Confidence            99999999999999999999997 7776531  1125799986  999999999987641  56667888877753  78


Q ss_pred             cCHHHHHHHHHHHHHHhhh
Q psy15555        464 FSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       464 ~s~~~~~~~~~~~~~~~~~  482 (488)
                      |||+.+++++.++|++++.
T Consensus       447 fsw~~~a~~~~~lY~~~~~  465 (466)
T PRK00654        447 FSWDKSAEEYLELYRRLLG  465 (466)
T ss_pred             CChHHHHHHHHHHHHHHhh
Confidence            9999999999999998864

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=5.2e-33  Score=272.46  Aligned_cols=373  Identities=11%  Similarity=0.056  Sum_probs=245.8

Q ss_pred             EEEeccCCC--CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         55 VAFFHPYCN--AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        55 I~~~~~~~~--~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |+|+++..+  +.+|+....++++++|++. ++++++..+.+.... + ..+......     .. +....++.......
T Consensus         1 iL~~~~~~P~P~~~G~~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~-~-~~~~l~~~~-----~~-~~~~~~~~~~~~~~   71 (397)
T TIGR03087         1 ILYLVHRIPYPPNKGDKIRSFHLLRHLAAR-HRVHLGTFVDDPEDW-Q-YAAALRPLC-----EE-VCVVPLDPRVARLR   71 (397)
T ss_pred             CeeecCCCCCCCCCCCcEeHHHHHHHHHhc-CcEEEEEeCCCcccH-H-HHHHHHHHh-----he-eEEeecCcHHHHHH
Confidence            466665433  4556788899999999885 466666665432211 1 111111111     11 22222211100000


Q ss_pred             cC---c---hhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhh
Q psy15555        133 SL---Y---PYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       133 ~~---~---~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                      ..   .   +..............+.+.+++.++|+|+.......... .....++|.++..|      |+....+....
T Consensus        72 ~~~~l~~~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~-~~~~~~~p~i~~~~------d~~~~~~~~~~  144 (397)
T TIGR03087        72 SLLGLLTGEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYV-TPHVRGVPRIVDFV------DVDSDKWLQYA  144 (397)
T ss_pred             HHhhhcCCCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceec-cccccCCCeEeehh------hHHHHHHHHHH
Confidence            00   0   000001111223344566778889998886543222111 11145778888766      22211111100


Q ss_pred             cccCccccccCccchhhhHHH---HHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccC
Q psy15555        207 THNNSQRVANNPILTSFKLFY---YKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKIT  282 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~  282 (488)
                      .        ...  ...+..+   .+.+..+++.+.+.+|.++++|+.+++.+.+.++. +.++.+++||+|.+.+.+..
T Consensus       145 ~--------~~~--~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~  214 (397)
T TIGR03087       145 R--------TKR--WPLRWIYRREGRLLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDR  214 (397)
T ss_pred             h--------ccC--cchhHHHHHHHHHHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCc
Confidence            0        000  0011112   23455678889999999999999999999886543 45899999999988776543


Q ss_pred             CC---CCCCCeEEEEeeccCCCCChHHHH----HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC
Q psy15555        283 HS---KTDGPVKIISVAQFRPEKDHPLQL----RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL  355 (488)
Q Consensus       283 ~~---~~~~~~~i~~~g~~~~~k~~~~ll----~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l  355 (488)
                      ..   ...++++++|+|++.+.||++.++    +++..+.++.     |+++|+|+|+++.       +++++    ++.
T Consensus       215 ~~~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~-----p~~~l~ivG~g~~-------~~~~~----l~~  278 (397)
T TIGR03087       215 DYPNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARR-----PAAEFYIVGAKPS-------PAVRA----LAA  278 (397)
T ss_pred             cccCCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHC-----CCcEEEEECCCCh-------HHHHH----hcc
Confidence            21   123457899999999999999887    5566666666     8999999999872       23333    333


Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHH
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEV  433 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~  433 (488)
                      .++|++.|++  +++..+|+.||++|.||. .|++|++++|||++|+|||+++.++.  .+....    ++|+++. |++
T Consensus       279 ~~~V~~~G~v--~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~--~i~~~~----~~g~lv~~~~~  350 (397)
T TIGR03087       279 LPGVTVTGSV--ADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE--GIDALP----GAELLVAADPA  350 (397)
T ss_pred             CCCeEEeeec--CCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc--cccccC----CcceEeCCCHH
Confidence            5679999999  589999999999999995 68999999999999999999987532  344333    5677765 999


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      +++++|.++++ |++.+++|+++|++.+ ++|||+..++++.++++
T Consensus       351 ~la~ai~~ll~-~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       351 DFAAAILALLA-NPAEREELGQAARRRVLQHYHWPRNLARLDALLE  395 (397)
T ss_pred             HHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence            99999999999 9999999999999998 89999999999998875

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.2e-33  Score=271.33  Aligned_cols=361  Identities=15%  Similarity=0.139  Sum_probs=251.0

Q ss_pred             EEEEeccCCC-CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCN-AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~-~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++.+... ..||+++++..++++|.+.++  +|.+++...+.........           . ...........   
T Consensus         1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~g~--~v~v~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~---   63 (375)
T cd03821           1 KILHVIPSFDPKYGGPVRVVLNLSKALAKLGH--EVTVATTDAGGDPLLVALN-----------G-VPVKLFSINVA---   63 (375)
T ss_pred             CeEEEcCCCCcccCCeehHHHHHHHHHHhcCC--cEEEEecCCCCccchhhcc-----------C-ceeeecccchh---
Confidence            6888887764 677899999999999998854  4445444432221100000           0 00000000000   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccch-hhhh--hhhCCCeeEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFT-YPLF--SYIGGSKVACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~-~~~~--~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                      ....   .....+.............+||+++.+..+... ....  ....+.|++...|.....+..            
T Consensus        64 ~~~~---~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------  128 (375)
T cd03821          64 YGLN---LARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWAL------------  128 (375)
T ss_pred             hhhh---hhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccc------------
Confidence            0000   000000001112223345689999876543322 1222  124688999888854321100            


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC------
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH------  283 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~------  283 (488)
                               .........+  .....+...+.++.+++.|+......... ....++.+++|++|.+.+.....      
T Consensus       129 ---------~~~~~~~~~~--~~~~~~~~~~~~~~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~  196 (375)
T cd03821         129 ---------PHKALKKRLA--WFLFERRLLQAAAAVHATSEQEAAEIRRL-GLKAPIAVIPNGVDIPPFAALPSRGRRRK  196 (375)
T ss_pred             ---------ccchhhhHHH--HHHHHHHHHhcCCEEEECCHHHHHHHHhh-CCcccEEEcCCCcChhccCcchhhhhhhh
Confidence                     0011111111  11234556788999999998877777663 44568999999999877755431      


Q ss_pred             -CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        284 -SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       284 -~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                       ....++++++++|++.+.||++.+++|+..+.+++     ++++++++|.++.    .+...++..+++.++.++|.+.
T Consensus       197 ~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~-----~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~~v~~~  267 (375)
T cd03821         197 FPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERF-----PDWHLVIAGPDEG----GYRAELKQIAAALGLEDRVTFT  267 (375)
T ss_pred             ccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhc-----CCeEEEEECCCCc----chHHHHHHHHHhcCccceEEEc
Confidence             13456789999999999999999999999999887     8999999998753    2335566666888888999999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKL  441 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~  441 (488)
                      |+++.+|+..+|+.||+++.||..|++|++++|||++|+|||+++.++.. +++.+.     +|++++ +.++++++|.+
T Consensus       268 g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~i~~  341 (375)
T cd03821         268 GMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQ-ELIEYG-----CGWVVDDDVDALAAALRR  341 (375)
T ss_pred             CCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHH-HHhhcC-----ceEEeCCChHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998886 777654     688876 67999999999


Q ss_pred             HHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                      +++ +++.++++++++++.+ ++|||+.+++++.
T Consensus       342 l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  374 (375)
T cd03821         342 ALE-LPQRLKAMGENGRALVEERFSWTAIAQQLL  374 (375)
T ss_pred             HHh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            999 9999999999999996 9999999999875

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=4.8e-33  Score=275.66  Aligned_cols=402  Identities=13%  Similarity=0.064  Sum_probs=259.8

Q ss_pred             cccEEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhh--hhcccc----------cC
Q psy15555         51 VLKTVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAH--QRFNIV----------LP  115 (488)
Q Consensus        51 ~~~rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~----------~~  115 (488)
                      ++|||+|+...+.   ..||..-++..|.++|+++|+++.|  +.+..+..... .....  ..+...          ..
T Consensus         2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v--~~P~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   78 (485)
T PRK14099          2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRT--LVPGYPAVLAG-IEDAEQVHSFPDLFGGPARLLAARA   78 (485)
T ss_pred             CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEE--EeCCCcchhhh-hcCceEEEEEeeeCCceEEEEEEEe
Confidence            3599999875433   5678889999999999999655554  44433222111 00100  001000          00


Q ss_pred             CCeeEEEEeeccceeecc--Cc------hhHHHHHHHHHHHHHHHHHh----hhcCCcEEEecCCccchhhhh-hh--hC
Q psy15555        116 DQVINFVYLYRRKFVEAS--LY------PYFTLLGQSIGSMILGVEAL----LSFQPDIYIDTMGYAFTYPLF-SY--IG  180 (488)
Q Consensus       116 ~~~v~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~l----~~~~pDiii~~~~~~~~~~~~-~~--~~  180 (488)
                      ++ +.+..+..+.+..+.  .+      .+..-..++.-+.+++..++    ..++|||||++...+..++.. +.  ..
T Consensus        79 ~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~  157 (485)
T PRK14099         79 GG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRP  157 (485)
T ss_pred             CC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCC
Confidence            22 555555444333222  11      01111111111112222322    357999999998555665543 21  23


Q ss_pred             CCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHh
Q psy15555        181 GSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLW  260 (488)
Q Consensus       181 ~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~  260 (488)
                      ++|++.++|................ ...       ..........++.. ..+.+..+.++|.|+++|+..++.+.+..
T Consensus       158 ~~~~V~TiHn~~~qg~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~-~~~~k~~i~~ad~vitVS~~~a~ei~~~~  228 (485)
T PRK14099        158 APGTVFTIHNLAFQGQFPRELLGAL-GLP-------PSAFSLDGVEYYGG-IGYLKAGLQLADRITTVSPTYALEIQGPE  228 (485)
T ss_pred             CCCEEEeCCCCCCCCcCCHHHHHHc-CCC-------hHHcCchhhhhCCC-ccHHHHHHHhcCeeeecChhHHHHHhccc
Confidence            5789999996542110000000000 000       00000000000000 01345677889999999999999887532


Q ss_pred             -c---------cCCceEEEcCCCCchhhhccCCC--------------------------C--CCCCeEEEEeeccCCCC
Q psy15555        261 -N---------CQLKTYKLYPPCDTEDLKKITHS--------------------------K--TDGPVKIISVAQFRPEK  302 (488)
Q Consensus       261 -~---------~~~k~~vi~~~~d~~~~~~~~~~--------------------------~--~~~~~~i~~~g~~~~~k  302 (488)
                       +         ...++.+|+||+|.+.+.+....                          .  ..+.++++++||+.++|
T Consensus       229 ~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~K  308 (485)
T PRK14099        229 AGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQK  308 (485)
T ss_pred             CCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccc
Confidence             1         24589999999998877654321                          1  12467889999999999


Q ss_pred             ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcE-EEecCCChHHHHHHH-HhCcEE
Q psy15555        303 DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNV-EFKVNLPYEDMKKEF-SEGLIG  380 (488)
Q Consensus       303 ~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v-~~~g~~~~~el~~~~-~~ad~~  380 (488)
                      |++.+++|+..+.+       .+++|+|+|+|+.    ++.+++++++++++  +++ .++|+.  +++..+| +.||+|
T Consensus       309 G~d~Li~A~~~l~~-------~~~~lvivG~G~~----~~~~~l~~l~~~~~--~~v~~~~G~~--~~l~~~~~a~aDif  373 (485)
T PRK14099        309 GLDLLLEALPTLLG-------EGAQLALLGSGDA----ELEARFRAAAQAYP--GQIGVVIGYD--EALAHLIQAGADAL  373 (485)
T ss_pred             cHHHHHHHHHHHHh-------cCcEEEEEecCCH----HHHHHHHHHHHHCC--CCEEEEeCCC--HHHHHHHHhcCCEE
Confidence            99999999999864       4789999999852    34467777777764  344 788984  8999887 579999


Q ss_pred             EEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCC-----ccccceecC--CHHHHHHHHHH---HHccCHHHH
Q psy15555        381 LHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPE-----TCRNGFLAC--DEVEYAQTIKL---ILHLSQDTK  450 (488)
Q Consensus       381 v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~-----~~~~g~~~~--~~~~l~~~i~~---ll~~~~~~~  450 (488)
                      ++||..|+||++.+|||+||+|+|+++.+|.. |++.++++     +..+|++++  |+++++++|.+   +++ |++.+
T Consensus       374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~-d~~~~  451 (485)
T PRK14099        374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAW  451 (485)
T ss_pred             EECCccCCCcHHHHHHHHCCCCcEEeCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhc-CHHHH
Confidence            99999999999999999999988889999997 77765311     014799986  99999999987   777 89999


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ++|++++++  ++|||+++++++.++|++++...
T Consensus       452 ~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~~~  483 (485)
T PRK14099        452 RRLQRNGMT--TDVSWRNPAQHYAALYRSLVAER  483 (485)
T ss_pred             HHHHHHhhh--hcCChHHHHHHHHHHHHHHHhhh
Confidence            999998863  78999999999999999998654

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.5e-34  Score=273.75  Aligned_cols=346  Identities=20%  Similarity=0.268  Sum_probs=236.1

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++|+++...||+|+++..+++.+.+    +++++...+.+........           .. +....+......   
T Consensus         1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~~----~~v~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~---   61 (351)
T cd03804           1 KVAIVHDWLVNIGGGEKVVEALARLFPD----ADIFTLVDDPDKLPRLLRL-----------KK-IRTSFIQKLPFA---   61 (351)
T ss_pred             CEEEEEeccccCCCHHHHHHHHHHhCCC----CCEEEEeecCCccchhhcC-----------Cc-eeechhhhchhh---
Confidence            6899999998889999999888777643    4555444332222111100           00 111111000000   


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCcc-chHHHHHHHhhhhcccCcc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTI-TKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~-~~d~~~~~~~~~~~~~~~~  212 (488)
                       ...+   ...........+.+...++|+|+.+..+.... .. ...+.|.+.++|.|.. .||........        
T Consensus        62 -~~~~---~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~-~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~~--------  127 (351)
T cd03804          62 -RRRY---RKYLPLMPLAIEQFDLSGYDLVISSSHAVAKG-VI-TRPDQLHICYCHTPMRYAWDLYHDYLKE--------  127 (351)
T ss_pred             -HhhH---hhhCchhhHHHHhccccCCCEEEEcCcHHhcc-cc-CCCCCcEEEEeCCchHHHhcCchHhhhh--------
Confidence             0000   01111112234456677899998776433322 22 2567888999997642 22221111110        


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEE
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI  292 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i  292 (488)
                         ...............+..+++..++++|.++++|+.+++.+.+.++.  +..+++|++|.+.+.+..    ..+..+
T Consensus       128 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~--~~~vi~~~~d~~~~~~~~----~~~~~i  198 (351)
T cd03804         128 ---SGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYGR--DATVIYPPVDTDRFTPAE----EKEDYY  198 (351)
T ss_pred             ---cccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhCC--CcEEECCCCCHhhcCcCC----CCCCEE
Confidence               00001111122334455667778899999999999999999887664  468999999987765432    234579


Q ss_pred             EEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHH
Q psy15555        293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       293 ~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~  372 (488)
                      +++|++.+.||++.+++|++++         + ++|+|+|+++..      +++++     +..++|+++|+++++|+..
T Consensus       199 l~~G~~~~~K~~~~li~a~~~~---------~-~~l~ivG~g~~~------~~l~~-----~~~~~V~~~g~~~~~~~~~  257 (351)
T cd03804         199 LSVGRLVPYKRIDLAIEAFNKL---------G-KRLVVIGDGPEL------DRLRA-----KAGPNVTFLGRVSDEELRD  257 (351)
T ss_pred             EEEEcCccccChHHHHHHHHHC---------C-CcEEEEECChhH------HHHHh-----hcCCCEEEecCCCHHHHHH
Confidence            9999999999999999999876         4 689999998632      34443     3468999999999999999


Q ss_pred             HHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCH-HH
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQ-DT  449 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~-~~  449 (488)
                      +|+.||+++.||. |++|++++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++|.++++ ++ +.
T Consensus       258 ~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~-e~i~~~----~~G~~~~~~~~~~la~~i~~l~~-~~~~~  330 (351)
T cd03804         258 LYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGAL-ETVIDG----VTGILFEEQTVESLAAAVERFEK-NEDFD  330 (351)
T ss_pred             HHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCc-ceeeCC----CCEEEeCCCCHHHHHHHHHHHHh-CcccC
Confidence            9999999999999 99999999999999999999999886 899887    8899875  89999999999998 77 33


Q ss_pred             HHHHHHHHHHHHhhcCHHHHHHHH
Q psy15555        450 KTRISQNAVSSVDRFSMEEFKNGF  473 (488)
Q Consensus       450 ~~~~~~~a~~~~~~~s~~~~~~~~  473 (488)
                      .+++    ++.+++|+|+++.+++
T Consensus       331 ~~~~----~~~~~~~~~~~~~~~~  350 (351)
T cd03804         331 PQAI----RAHAERFSESRFREKI  350 (351)
T ss_pred             HHHH----HHHHHhcCHHHHHHHh
Confidence            4444    4444789999988775

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.5e-33  Score=281.22  Aligned_cols=295  Identities=18%  Similarity=0.193  Sum_probs=234.4

Q ss_pred             cCCcEEEecCC-ccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHH
Q psy15555        158 FQPDIYIDTMG-YAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLY  235 (488)
Q Consensus       158 ~~pDiii~~~~-~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (488)
                      -++|++|.+.. +...+. .++...++|+++..|.-.... ....+..            ........+..+.+.+..+.
T Consensus       172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e-~~~~~~~------------~~~~~~~~~~~~~~~~~~l~  238 (475)
T cd03813         172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRE-RKIELLQ------------ADWEMSYFRRLWIRFFESLG  238 (475)
T ss_pred             CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHH-HHHHHHh------------cccchHHHHHHHHHHHHHHH
Confidence            36899997753 222222 334467899999999643100 0000000            00012223344455666777


Q ss_pred             HHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC-CCCCCCeEEEEeeccCCCCChHHHHHHHHHh
Q psy15555        236 SHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-SKTDGPVKIISVAQFRPEKDHPLQLRAMYQL  314 (488)
Q Consensus       236 ~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l  314 (488)
                      +.+++++|.|++.|+..++...+.+..++|+.++||++|.+.+.+... ....+.++++++|++.+.||++.+++|++.+
T Consensus       239 ~~~~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l  318 (475)
T cd03813         239 RLAYQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIV  318 (475)
T ss_pred             HHHHHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHHHHHHH
Confidence            888999999999999999988776555568999999999988766542 2335678999999999999999999999999


Q ss_pred             HHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHH
Q psy15555        315 RQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIV  394 (488)
Q Consensus       315 ~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~l  394 (488)
                      .++.     |+++++|+|.++.  ++++.++++++++++++.++|+|+|   .+++.++|+.+|+++.||..|++|++++
T Consensus       319 ~~~~-----p~~~l~IvG~g~~--~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vl  388 (475)
T cd03813         319 RKKI-----PDAEGWVIGPTDE--DPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVIL  388 (475)
T ss_pred             HHhC-----CCeEEEEECCCCc--ChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHH
Confidence            9887     8999999998863  3477899999999999999999999   3799999999999999999999999999


Q ss_pred             HHHHcCCcEEEeCCCCCccceeccCCCc---cccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHH
Q psy15555        395 ECMAAGLIMIAHKSGGPKMDIVIEDPET---CRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEE  468 (488)
Q Consensus       395 Ea~a~G~PvI~~~~~~~~~eiv~~~~~~---~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~  468 (488)
                      |||+||+|||+++.++.. |++.+. .+   +.+|++++  |+++++++|.++++ |++.++++++++++.+ +.|+|+.
T Consensus       389 EAma~G~PVVatd~g~~~-elv~~~-~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~~  465 (475)
T cd03813         389 EAMAAGIPVVATDVGSCR-ELIEGA-DDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLER  465 (475)
T ss_pred             HHHHcCCCEEECCCCChH-HHhcCC-cccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHHH
Confidence            999999999999999986 888872 00   15798876  99999999999999 9999999999999999 8899999


Q ss_pred             HHHHHHHHHH
Q psy15555        469 FKNGFLTFTQ  478 (488)
Q Consensus       469 ~~~~~~~~~~  478 (488)
                      ++++|.++|+
T Consensus       466 ~~~~y~~lY~  475 (475)
T cd03813         466 MIDSYRRLYL  475 (475)
T ss_pred             HHHHHHHHhC
Confidence            9999999874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=4.9e-33  Score=269.98  Aligned_cols=344  Identities=20%  Similarity=0.243  Sum_probs=249.3

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++++... .||+++.+..++++|.++++++.++..........   ...          .  .....+.....    
T Consensus         1 ~il~~~~~~~-~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~---~~~----------~--~~~~~~~~~~~----   60 (360)
T cd04951           1 KILYVITGLG-LGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKP---PID----------A--TIILNLNMSKN----   60 (360)
T ss_pred             CeEEEecCCC-CCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccc---hhh----------c--cceEEeccccc----
Confidence            4777776553 57799999999999999866666555444321110   101          0  00111111100    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhh-hh-hCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLF-SY-IGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~-~~-~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ...       .+.......+++++.+||+||.+...+..+..+ +. ..+.+++...|....                  
T Consensus        61 ~~~-------~~~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------  115 (360)
T cd04951          61 PLS-------FLLALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------  115 (360)
T ss_pred             chh-------hHHHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc------------------
Confidence            000       112224466778889999999876555443322 21 235677777774320                  


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCC-------
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITH-------  283 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~-------  283 (488)
                              ....       ..+..+.....++.++++|+...+.+.+.+.. +.++.++||++|...+.+...       
T Consensus       116 --------~~~~-------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~  180 (360)
T cd04951         116 --------GGRL-------RMLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRN  180 (360)
T ss_pred             --------hhHH-------HHHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHH
Confidence                    0011       11122334455788889999999999887643 358999999998776543321       


Q ss_pred             --CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEE
Q psy15555        284 --SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEF  361 (488)
Q Consensus       284 --~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~  361 (488)
                        ...+++++++++|++.+.||++.++++++++.++.     |+++|+|+|+|+..      +++++.+++.++.++|.+
T Consensus       181 ~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~  249 (360)
T cd04951         181 ALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY-----LDIKLLIAGDGPLR------ATLERLIKALGLSNRVKL  249 (360)
T ss_pred             HcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC-----CCeEEEEEcCCCcH------HHHHHHHHhcCCCCcEEE
Confidence              12356789999999999999999999999998877     79999999998743      678888888888889999


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec--CCHHHHHHHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEVEYAQTI  439 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~--~~~~~l~~~i  439 (488)
                      .|..  +++..+|+.||++++||..|++|++++|||++|+|||+++.++.. |++++.      |+.+  .|++++++++
T Consensus       250 ~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~------g~~~~~~~~~~~~~~i  320 (360)
T cd04951         250 LGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVR-EVVGDS------GLIVPISDPEALANKI  320 (360)
T ss_pred             eccc--ccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChh-hEecCC------ceEeCCCCHHHHHHHH
Confidence            9987  899999999999999999999999999999999999999998886 888754      5554  4999999999


Q ss_pred             HHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        440 KLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       440 ~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      .++++++++.+..++++ ++.+ ++|||+.+++++.++|+
T Consensus       321 ~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~  359 (360)
T cd04951         321 DEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT  359 (360)
T ss_pred             HHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence            99995477777777776 6666 99999999999999986

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=8.8e-33  Score=274.11  Aligned_cols=400  Identities=15%  Similarity=0.117  Sum_probs=261.2

Q ss_pred             cccEEEEeccCC---CCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHH--HHHhhh--hccccc---------
Q psy15555         51 VLKTVAFFHPYC---NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEI--IKRAHQ--RFNIVL---------  114 (488)
Q Consensus        51 ~~~rI~~~~~~~---~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~--~~~~~~---------  114 (488)
                      +.|||+|+...+   ...||..-++-.|.++|+++|+  +|.++...........  ......  .+.+.+         
T Consensus         4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~--~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (489)
T PRK14098          4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGF--EARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHV   81 (489)
T ss_pred             CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCC--eEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEE
Confidence            349999987543   3677888999999999999955  4444444332221110  000000  010010         


Q ss_pred             -----CCCeeEEEEeeccceeecc-Cch-------hHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchhhhhhh-
Q psy15555        115 -----PDQVINFVYLYRRKFVEAS-LYP-------YFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTYPLFSY-  178 (488)
Q Consensus       115 -----~~~~v~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~~~~~-  178 (488)
                           +..++.+..+..+.+..+. .+.       +..-..++..+...+.+.+++  ++|||||.+...+..++.+.. 
T Consensus        82 ~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~  161 (489)
T PRK14098         82 KVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKT  161 (489)
T ss_pred             EEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHH
Confidence                 1001333333332222221 111       111111222222333344443  689999998755555554321 


Q ss_pred             -------hCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhh-hHH-HHHHHHHHHHHHhcccCEEEEcC
Q psy15555        179 -------IGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSF-KLF-YYKVFALLYSHVGKYSDIIMVNS  249 (488)
Q Consensus       179 -------~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d~ii~~s  249 (488)
                             ..++|++.++|.....-.+........             ..... ... .+.....+.+..+..+|.|+++|
T Consensus       162 ~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-------------~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS  228 (489)
T PRK14098        162 VYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-------------LPEEVCSGLHREGDEVNMLYTGVEHADLLTTTS  228 (489)
T ss_pred             HhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-------------CCHHhhhhhhhcCCcccHHHHHHHhcCcceeeC
Confidence                   137899999996431000000000000             00000 000 00000123455678899999999


Q ss_pred             hhHHHHHHHH----hcc-------CCceEEEcCCCCchhhhccCCC----------------------------CCCCCe
Q psy15555        250 SWTEEHVIQL----WNC-------QLKTYKLYPPCDTEDLKKITHS----------------------------KTDGPV  290 (488)
Q Consensus       250 ~~~~~~~~~~----~~~-------~~k~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~  290 (488)
                      +..++.+.+.    ++.       ..++.+|+||+|.+.+.+....                            ..++.+
T Consensus       229 ~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~  308 (489)
T PRK14098        229 PRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETP  308 (489)
T ss_pred             HHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCC
Confidence            9999988752    121       3589999999999887764321                            013567


Q ss_pred             EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHH
Q psy15555        291 KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDM  370 (488)
Q Consensus       291 ~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el  370 (488)
                      +++++||+.+.||++.+++|+.++.+       ++++|+|+|+|+.    .+.++++++++++  +++|.+.|.++.+++
T Consensus       309 ~i~~vgRl~~~KG~d~li~a~~~l~~-------~~~~lvivG~G~~----~~~~~l~~l~~~~--~~~V~~~g~~~~~~~  375 (489)
T PRK14098        309 LVGVIINFDDFQGAELLAESLEKLVE-------LDIQLVICGSGDK----EYEKRFQDFAEEH--PEQVSVQTEFTDAFF  375 (489)
T ss_pred             EEEEeccccccCcHHHHHHHHHHHHh-------cCcEEEEEeCCCH----HHHHHHHHHHHHC--CCCEEEEEecCHHHH
Confidence            99999999999999999999999874       4789999999852    3457888888876  468999999999999


Q ss_pred             HHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHH---cc
Q psy15555        371 KKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLIL---HL  445 (488)
Q Consensus       371 ~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll---~~  445 (488)
                      ..+|+.||++++||..|++|++.+|||++|+|+|+++.+|.. |.+.+.+.+..+|++++  |+++++++|.+++   . 
T Consensus       376 ~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~-  453 (489)
T PRK14098        376 HLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYH-  453 (489)
T ss_pred             HHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHc-
Confidence            999999999999999999999999999999999999999987 77754211226899986  8999999999864   5 


Q ss_pred             CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        446 SQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       446 ~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +++.+.++++++.  .++|||+..++++.++|+++++
T Consensus       454 ~~~~~~~~~~~~~--~~~fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        454 DEERWEELVLEAM--ERDFSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             CHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHHHhc
Confidence            7888888877663  2899999999999999998863

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.1e-33  Score=267.54  Aligned_cols=350  Identities=17%  Similarity=0.177  Sum_probs=255.5

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++++.   .||.++....++++|.+.  +++|.+++.......  ....          .. +.+..++..... ..
T Consensus         1 kIl~i~~~---~~g~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~--~~~~----------~~-~~~~~~~~~~~~-~~   61 (359)
T cd03808           1 KILHIVTV---DGGLYSFRLPLIKALRAA--GYEVHVVAPPGDELE--ELEA----------LG-VKVIPIPLDRRG-IN   61 (359)
T ss_pred             CeeEEEec---chhHHHHHHHHHHHHHhc--CCeeEEEecCCCccc--cccc----------CC-ceEEeccccccc-cC
Confidence            57887766   567889999999999888  555556555533221  0000          12 444444332210 01


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhh-h-hCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFS-Y-IGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~-~-~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      .+       ..+.....+.+.+++.+||+++.+..++..+..+. . ....+++...|.....                 
T Consensus        62 ~~-------~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------  117 (359)
T cd03808          62 PF-------KDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFV-----------------  117 (359)
T ss_pred             hH-------hHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchh-----------------
Confidence            11       11222344567788899999987765555443332 2 2445556555543210                 


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc--CCceEEEcCCCCchhhhccCCCCCCCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC--QLKTYKLYPPCDTEDLKKITHSKTDGP  289 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~~k~~vi~~~~d~~~~~~~~~~~~~~~  289 (488)
                               ..........+..+++...+.+|.+++.|+.+++.+.+.+..  ..++.+.++++|.+.+.........++
T Consensus       118 ---------~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (359)
T cd03808         118 ---------FTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDD  188 (359)
T ss_pred             ---------hccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCC
Confidence                     000011334455567778889999999999999999987654  246667778888776654432123567


Q ss_pred             eEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHH-HHHhcCCCCcEEEecCCChH
Q psy15555        290 VKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQD-LCKHLSLENNVEFKVNLPYE  368 (488)
Q Consensus       290 ~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~-~~~~~~l~~~v~~~g~~~~~  368 (488)
                      ++++++|++.+.||++.++++++.+.++.     ++++++++|+++...      .... .+.+.+..++|.+.|..  +
T Consensus       189 ~~i~~~G~~~~~k~~~~li~~~~~l~~~~-----~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~v~~~g~~--~  255 (359)
T cd03808         189 PVFLFVARLLKDKGIDELLEAARILKAKG-----PNVRLLLVGDGDEEN------PAAILEIEKLGLEGRVEFLGFR--D  255 (359)
T ss_pred             cEEEEEeccccccCHHHHHHHHHHHHhcC-----CCeEEEEEcCCCcch------hhHHHHHHhcCCcceEEEeecc--c
Confidence            89999999999999999999999998776     799999999987542      1222 35566667899999995  8


Q ss_pred             HHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccC
Q psy15555        369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLS  446 (488)
Q Consensus       369 el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~  446 (488)
                      ++.++|+.||++++||..|++|++++|||++|+|||+++.++.. +++.++    .+|++++  |+++++++|.+++. +
T Consensus       256 ~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~-~~i~~~----~~g~~~~~~~~~~~~~~i~~l~~-~  329 (359)
T cd03808         256 DVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCR-EAVIDG----VNGFLVPPGDAEALADAIERLIE-D  329 (359)
T ss_pred             cHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCch-hhhhcC----cceEEECCCCHHHHHHHHHHHHh-C
Confidence            99999999999999999999999999999999999999999886 888877    7899876  79999999999998 9


Q ss_pred             HHHHHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        447 QDTKTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       447 ~~~~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                      ++.+.++++++++.+ ++||++.+++++.
T Consensus       330 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  358 (359)
T cd03808         330 PELRARMGQAARKRAEEEFDEEIVVKKLL  358 (359)
T ss_pred             HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence            999999999999997 9999999998875

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=6.5e-33  Score=269.36  Aligned_cols=373  Identities=12%  Similarity=0.053  Sum_probs=235.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||+++...++ .||+|+.+.+|++.+.++|+++.+....+....... ..            .. +........++...
T Consensus         1 mkil~i~~~l~-~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~-~~------------~~-~~~~~~~~~~~~~~   65 (405)
T PRK10125          1 MNILQFNVRLA-EGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESV-SH------------QN-YPQVIKHTPRMTAM   65 (405)
T ss_pred             CeEEEEEeeec-CCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccc-cc------------CC-cceEEEecccHHHH
Confidence            89999876655 567999999999999999777776666555332111 00            00 11111111111100


Q ss_pred             cCchhHHH-HHHHHHHHHHHHHHh-hhcCCcEEEecCCccc---hhhhhh-------hhCCCeeEEEEeCCccch-----
Q psy15555        133 SLYPYFTL-LGQSIGSMILGVEAL-LSFQPDIYIDTMGYAF---TYPLFS-------YIGGSKVACYIHYPTITK-----  195 (488)
Q Consensus       133 ~~~~~~~~-~~~~~~~~~~~~~~l-~~~~pDiii~~~~~~~---~~~~~~-------~~~~~~~v~~~h~p~~~~-----  195 (488)
                      ......+. -..-+.....+.+++ +.++|||||.+...+.   ...+++       ...++|++.++|.....+     
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~  145 (405)
T PRK10125         66 ANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAF  145 (405)
T ss_pred             HHHHHHHhcchhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCC
Confidence            00000000 011123334455666 6889999997765542   211111       134789999999643211     


Q ss_pred             -HHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCC
Q psy15555        196 -EMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCD  274 (488)
Q Consensus       196 -d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d  274 (488)
                       +-+............-..+  ...........+.......+.+.+.++.++++|++.++.+.+.++ ..++.+|+||+|
T Consensus       146 ~~~C~~~~~~c~~Cp~l~~~--~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid  222 (405)
T PRK10125        146 TDGCEGWKTGCQKCPTLNNY--PPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGID  222 (405)
T ss_pred             CcccccccccCCCCCCccCC--CCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcC
Confidence             0000000000000000000  000011111122222233344556678999999999999987666 458999999999


Q ss_pred             chhhhcc---C-CCCCCCCeEEEEeecc--CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHH
Q psy15555        275 TEDLKKI---T-HSKTDGPVKIISVAQF--RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQD  348 (488)
Q Consensus       275 ~~~~~~~---~-~~~~~~~~~i~~~g~~--~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~  348 (488)
                      .+.+...   . .....++++++++|+.  .+.||.+.+++|+..+.        ++++|+++|.++..        .  
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~--------~~~~L~ivG~g~~~--------~--  284 (405)
T PRK10125        223 MATEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG--------DKIELHTFGKFSPF--------T--  284 (405)
T ss_pred             cccccccccccccccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC--------CCeEEEEEcCCCcc--------c--
Confidence            6432211   1 1123456789999984  36799999999998873        57899999987521        0  


Q ss_pred             HHHhcCCCCcEEEecCC-ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccce
Q psy15555        349 LCKHLSLENNVEFKVNL-PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGF  427 (488)
Q Consensus       349 ~~~~~~l~~~v~~~g~~-~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~  427 (488)
                             .+++.++|.. +..++.++|+.||+||+||..|+||++++||||||+|||+++.+|.. |++.+.     +|+
T Consensus       285 -------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~-Eiv~~~-----~G~  351 (405)
T PRK10125        285 -------AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAR-EVLQKS-----GGK  351 (405)
T ss_pred             -------ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChH-HhEeCC-----cEE
Confidence                   2458888876 55789999999999999999999999999999999999999999996 888653     799


Q ss_pred             ecC--CHHHHHHHHHHHHccCHHHHHH----HHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        428 LAC--DEVEYAQTIKLILHLSQDTKTR----ISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       428 ~~~--~~~~l~~~i~~ll~~~~~~~~~----~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      +++  |+++|++.+      +++..++    +.+++++.+ ++||++.+++++.++|+++
T Consensus       352 lv~~~d~~~La~~~------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l  405 (405)
T PRK10125        352 TVSEEEVLQLAQLS------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL  405 (405)
T ss_pred             EECCCCHHHHHhcc------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            987  999999753      3333333    234577777 8899999999999999864

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.6e-33  Score=272.11  Aligned_cols=352  Identities=18%  Similarity=0.155  Sum_probs=248.6

Q ss_pred             EEEEeccCCCCC-CCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCNAG-GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~~-gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++++...+. ||+++.+..++++|.++|  ++|.+++......... ...   ..  .     +.....+...... 
T Consensus         1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~-~~~---~~--~-----~~~~~~~~~~~~~-   66 (364)
T cd03814           1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG-PAR---VV--P-----VPSVPLPGYPEIR-   66 (364)
T ss_pred             CeEEEecccCccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC-CCC---ce--e-----ecccccCcccceE-
Confidence            688887666544 889999999999999985  5555555542211100 000   00  0     0000000000000 


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchh--hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY--PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~--~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                      ..          +.......+.++..+||+|+.+.......  ..+....++|++...|....     .+...       
T Consensus        67 ~~----------~~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~-------  124 (364)
T cd03814          67 LA----------LPPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFP-----EYLRY-------  124 (364)
T ss_pred             ec----------ccchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChH-----HHhhh-------
Confidence            00          00112345566788999887654322211  12233578899988885431     00000       


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC------
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS------  284 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~------  284 (488)
                                 ............+.+.+.+.+|.+++.|+...+.+.+.+  ..++.++++++|.+.+.+....      
T Consensus       125 -----------~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~  191 (364)
T cd03814         125 -----------YGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARG--FRRVRLWPRGVDTELFHPRRRDEALRAR  191 (364)
T ss_pred             -----------cccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccC--CCceeecCCCccccccCcccccHHHHHH
Confidence                       000111222244556677889999999999999666533  2478899999988766543211      


Q ss_pred             -CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        285 -KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       285 -~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                       ...++++++++|++.+.||++.++++++.+.++      ++++++++|+++..      +.++      +..++|.+.|
T Consensus       192 ~~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~------~~~~l~i~G~~~~~------~~~~------~~~~~v~~~g  253 (364)
T cd03814         192 LGPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR------PPVRLVIVGDGPAR------ARLE------ARYPNVHFLG  253 (364)
T ss_pred             hCCCCCeEEEEEeccccccCHHHHHHHHHHhhhc------CCceEEEEeCCchH------HHHh------ccCCcEEEEe
Confidence             123467899999999999999999999999764      48999999998643      2332      3457899999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKL  441 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~  441 (488)
                      .++.+++.++|+.||+++.||..|++|++++|||++|+|||+++.++.. ++++++    .+|++++  |.++++++|.+
T Consensus       254 ~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~-~~i~~~----~~g~~~~~~~~~~l~~~i~~  328 (364)
T cd03814         254 FLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPA-DIVTDG----ENGLLVEPGDAEAFAAALAA  328 (364)
T ss_pred             ccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCch-hhhcCC----cceEEcCCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999886 888887    7899876  88889999999


Q ss_pred             HHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      ++. |++.++++++++++.+++|+|+.+++++.++|+
T Consensus       329 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (364)
T cd03814         329 LLA-DPELRRRMAARARAEAERRSWEAFLDNLLEAYR  364 (364)
T ss_pred             HHc-CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHhhC
Confidence            999 999999999999998889999999999998873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=8.2e-33  Score=276.68  Aligned_cols=400  Identities=15%  Similarity=0.130  Sum_probs=260.7

Q ss_pred             cEEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHh--hhhccc-------------cc
Q psy15555         53 KTVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRA--HQRFNI-------------VL  114 (488)
Q Consensus        53 ~rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~-------------~~  114 (488)
                      |||++++..+.   ..||...++..|.++|+++|  ++|.+++...+..........  .....+             ..
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGV   78 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEE
Confidence            79999886543   37889999999999999995  555555554332211110000  000000             11


Q ss_pred             CCCeeEEEEeeccceeecc--Cch--hHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCCccchhhhh-hhhCC---Cee
Q psy15555        115 PDQVINFVYLYRRKFVEAS--LYP--YFTLLGQSIGSMILGVEALL--SFQPDIYIDTMGYAFTYPLF-SYIGG---SKV  184 (488)
Q Consensus       115 ~~~~v~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~~~-~~~~~---~~~  184 (488)
                      .++ +++..+..+....+.  .+.  ......++..+.....+.++  ..+|||||.+......++.. +...+   +|+
T Consensus        79 ~~~-v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~  157 (473)
T TIGR02095        79 VEG-VPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKT  157 (473)
T ss_pred             ECC-ceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCE
Confidence            123 566655544332221  222  11111222222233334443  36899999987545444433 22233   899


Q ss_pred             EEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH-hc--
Q psy15555        185 ACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL-WN--  261 (488)
Q Consensus       185 v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~--  261 (488)
                      +.++|................ .... .      ........++. ...+.+..+..+|.++++|+..++.+... ++  
T Consensus       158 v~TiH~~~~~g~~~~~~~~~~-~~~~-~------~~~~~~~~~~~-~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~  228 (473)
T TIGR02095       158 VFTIHNLAYQGVFPADDFSEL-GLPP-E------YFHMEGLEFYG-RVNFLKGGIVYADRVTTVSPTYAREILTPEFGYG  228 (473)
T ss_pred             EEEcCCCccCCcCCHHHHHHc-CCCh-H------HcCchhhhcCC-chHHHHHHHHhCCcCeecCHhHHHHhcCCcCCcc
Confidence            999996542110000000000 0000 0      00000000000 11134557789999999999998888652 11  


Q ss_pred             -------cCCceEEEcCCCCchhhhccCCC--------------------------C--CCCCeEEEEeeccCCCCChHH
Q psy15555        262 -------CQLKTYKLYPPCDTEDLKKITHS--------------------------K--TDGPVKIISVAQFRPEKDHPL  306 (488)
Q Consensus       262 -------~~~k~~vi~~~~d~~~~~~~~~~--------------------------~--~~~~~~i~~~g~~~~~k~~~~  306 (488)
                             .+.++.+|+||+|.+.+.+....                          .  .++.++++++||+.++||++.
T Consensus       229 l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~  308 (473)
T TIGR02095       229 LDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDL  308 (473)
T ss_pred             chhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHH
Confidence                   23589999999999877653210                          0  125789999999999999999


Q ss_pred             HHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCC
Q psy15555        307 QLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWN  386 (488)
Q Consensus       307 ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~  386 (488)
                      +++|+.++.+       .+++|+|+|.|+    +++.+++++++++.+  +++.+.+..+.+++..+|+.||++++||..
T Consensus       309 li~a~~~l~~-------~~~~lvi~G~g~----~~~~~~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~  375 (473)
T TIGR02095       309 LLAALPELLE-------LGGQLVVLGTGD----PELEEALRELAERYP--GNVRVIIGYDEALAHLIYAGADFILMPSRF  375 (473)
T ss_pred             HHHHHHHHHH-------cCcEEEEECCCC----HHHHHHHHHHHHHCC--CcEEEEEcCCHHHHHHHHHhCCEEEeCCCc
Confidence            9999999875       358999999885    144567777777654  578888877888899999999999999999


Q ss_pred             CcCCccHHHHHHcCCcEEEeCCCCCccceeccCC--CccccceecC--CHHHHHHHHHHHHc---cCHHHHHHHHHHHHH
Q psy15555        387 EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP--ETCRNGFLAC--DEVEYAQTIKLILH---LSQDTKTRISQNAVS  459 (488)
Q Consensus       387 e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~--~~~~~g~~~~--~~~~l~~~i~~ll~---~~~~~~~~~~~~a~~  459 (488)
                      |++|++++|||++|+|||+++.+|.. |++.+++  ....+|++++  |+++++++|.+++.   .+++.+++|++++.+
T Consensus       376 E~~gl~~lEAma~G~pvI~s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~  454 (473)
T TIGR02095       376 EPCGLTQLYAMRYGTVPIVRRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMS  454 (473)
T ss_pred             CCcHHHHHHHHHCCCCeEEccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc
Confidence            99999999999999999999999997 8886631  0115799876  99999999998775   267888899888753


Q ss_pred             HHhhcCHHHHHHHHHHHHHHh
Q psy15555        460 SVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       460 ~~~~~s~~~~~~~~~~~~~~~  480 (488)
                        ++|||+++++++.++|+++
T Consensus       455 --~~fsw~~~a~~~~~~Y~~l  473 (473)
T TIGR02095       455 --QDFSWDKSAKQYVELYRSL  473 (473)
T ss_pred             --cCCCcHHHHHHHHHHHHhC
Confidence              7899999999999999864

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4e-33  Score=270.42  Aligned_cols=334  Identities=14%  Similarity=0.083  Sum_probs=237.8

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCC-hhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS-PSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||++++++. ..||.++.+..++++|.+.  ++++.+++...... .......          .+ +.+...+....   
T Consensus         1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~--~~~v~~i~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~---   63 (358)
T cd03812           1 KILHIVGTM-NRGGIETFIMNYYRNLDRS--KIQFDFLVTSKEEGDYDDEIEK----------LG-GKIYYIPARKK---   63 (358)
T ss_pred             CEEEEeCCC-CCccHHHHHHHHHHhcCcc--ceEEEEEEeCCCCcchHHHHHH----------cC-CeEEEecCCCc---
Confidence            688988887 6778999999999999977  55555555443221 1111111          11 33332221111   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCee-EEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKV-ACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~-v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                         ..       +.......+.+++.+||+||.+......+. .+....+.+. +.+.|......               
T Consensus        64 ---~~-------~~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------  118 (358)
T cd03812          64 ---NP-------LKYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSH---------------  118 (358)
T ss_pred             ---cH-------HHHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccc---------------
Confidence               00       111123445677889999987764332222 2222344454 45555432100               


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC-------
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-------  283 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~-------  283 (488)
                             .....  ...   ...+.+...+.+|.+++.|+..++.+.+. ..+.++.+++|++|.+.+.....       
T Consensus       119 -------~~~~~--~~~---~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~  185 (358)
T cd03812         119 -------DKKKK--ILK---YKVLRKLINRLATDYLACSEEAGKWLFGK-VKNKKFKVIPNGIDLEKFIFNEEIRKKRRE  185 (358)
T ss_pred             -------cccch--hhH---HHHHHHHHHhcCCEEEEcCHHHHHHHHhC-CCcccEEEEeccCcHHHcCCCchhhhHHHH
Confidence                   00000  000   03344556788999999999999998775 33568999999999876644321       


Q ss_pred             -CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        284 -SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       284 -~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                       ....++++++++|++.+.||++.+++|+..+.++.     ++++++|+|.++..      +.+++.+++.++.++|.+.
T Consensus       186 ~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~-----~~~~l~ivG~g~~~------~~~~~~~~~~~~~~~v~~~  254 (358)
T cd03812         186 LGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN-----PNAKLLLVGDGELE------EEIKKKVKELGLEDKVIFL  254 (358)
T ss_pred             cCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhC-----CCeEEEEEeCCchH------HHHHHHHHhcCCCCcEEEe
Confidence             13356789999999999999999999999999887     89999999998643      6788888889999999999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKL  441 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~  441 (488)
                      |..  +++.++|+.||+++.||..|++|++++|||++|+|||+++.++.. +++.++    ..++..+ ++++++++|.+
T Consensus       255 g~~--~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~-~~i~~~----~~~~~~~~~~~~~a~~i~~  327 (358)
T cd03812         255 GVR--NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKE-VDLTDL----VKFLSLDESPEIWAEEILK  327 (358)
T ss_pred             ccc--CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchh-hhhccC----ccEEeCCCCHHHHHHHHHH
Confidence            984  899999999999999999999999999999999999999999986 777765    3344444 67999999999


Q ss_pred             HHccCHHHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSV  461 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~  461 (488)
                      +++ +++.+++++..+....
T Consensus       328 l~~-~~~~~~~~~~~~~~~~  346 (358)
T cd03812         328 LKS-EDRRERSSESIKKKGL  346 (358)
T ss_pred             HHh-Ccchhhhhhhhhhccc
Confidence            999 9999998888776544

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-32  Score=268.57  Aligned_cols=361  Identities=18%  Similarity=0.232  Sum_probs=256.1

Q ss_pred             EEEEeccCC-CCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYC-NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~-~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||++++..+ +..||++..+..++++|.++|  ++|.+++........... .          .. +........     
T Consensus         1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~~-~----------~~-~~~~~~~~~-----   61 (374)
T cd03817           1 KIGIFTDTYLPQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEEE-V----------VV-VRPFRVPTF-----   61 (374)
T ss_pred             CeeEeehhccCCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCcccc-c----------cc-ccccccccc-----
Confidence            577777554 456778899999999999985  455555443222111000 0          00 000000000     


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                       ......   ..+.......+.++..+||+|+.+..+.....  ......++|++...|....  ++....         
T Consensus        62 -~~~~~~---~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~---------  126 (374)
T cd03817          62 -KYPDFR---LPLPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYV---------  126 (374)
T ss_pred             -hhhhhh---ccccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHH---------
Confidence             000000   00111122444577889999987764443222  2223568899998886532  111000         


Q ss_pred             ccccccCccchhhhHHHHHHHH-HHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC------
Q psy15555        211 SQRVANNPILTSFKLFYYKVFA-LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH------  283 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~------  283 (488)
                                ............ .+++..++.+|.++++|+.+++.+.+. +...++.+++|++|...+.+...      
T Consensus       127 ----------~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd03817         127 ----------PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDERRK  195 (374)
T ss_pred             ----------hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc-CCCCceEEcCCccchhccCccchhHHHHh
Confidence                      000001111111 466778899999999999999998874 44557899999999877655432      


Q ss_pred             -CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        284 -SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       284 -~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                       ...+++++++++|++.+.|+++.++++++.+.++.     ++++++++|+++.      .+++++.+++.++.++|.++
T Consensus       196 ~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~-----~~~~l~i~G~~~~------~~~~~~~~~~~~~~~~v~~~  264 (374)
T cd03817         196 LGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEE-----PDVKLVIVGDGPE------REELEELARELGLADRVIFT  264 (374)
T ss_pred             cCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhC-----CCeEEEEEeCCch------HHHHHHHHHHcCCCCcEEEe
Confidence             22356789999999999999999999999998876     7999999999853      26788888888888999999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKL  441 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~  441 (488)
                      |.++.+++..+|+.||+++.||..|++|++++|||++|+|||+++.++.. +++.++    .+|++++ +.+++++++.+
T Consensus       265 g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~-~~i~~~----~~g~~~~~~~~~~~~~i~~  339 (374)
T cd03817         265 GFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLP-DLVADG----ENGFLFPPGDEALAEALLR  339 (374)
T ss_pred             ccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChh-hheecC----ceeEEeCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999886 899887    7899987 33399999999


Q ss_pred             HHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +++ +++.++++++++++.+++++   ..+++.+++++
T Consensus       340 l~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  373 (374)
T cd03817         340 LLQ-DPELRRRLSKNAEESAEKFS---FAKKVEKLYEE  373 (374)
T ss_pred             HHh-ChHHHHHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence            999 99999999999999986655   55666666654

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PLN00142 sucrose synthase

Probab=100.00  E-value=1.1e-32  Score=278.13  Aligned_cols=291  Identities=17%  Similarity=0.172  Sum_probs=212.0

Q ss_pred             cCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHH--HHH
Q psy15555        158 FQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVF--ALL  234 (488)
Q Consensus       158 ~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  234 (488)
                      .+||+||.+....+... .++...++|.+.+.|.-....       ...          .+.........+ +..  ...
T Consensus       407 ~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K-------~~~----------~~~~~~~~e~~y-~~~~r~~a  468 (815)
T PLN00142        407 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK-------YPD----------SDIYWKKFDDKY-HFSCQFTA  468 (815)
T ss_pred             CCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhh-------ccc----------cCCcccccchhh-hhhhchHH
Confidence            46999998864333333 333356999999888432100       000          000000000111 111  113


Q ss_pred             HHHHhcccCEEEEcChhHHHHH----H---HHh------------cc---CCceEEEcCCCCchhhhccCCC--------
Q psy15555        235 YSHVGKYSDIIMVNSSWTEEHV----I---QLW------------NC---QLKTYKLYPPCDTEDLKKITHS--------  284 (488)
Q Consensus       235 ~~~~~~~~d~ii~~s~~~~~~~----~---~~~------------~~---~~k~~vi~~~~d~~~~~~~~~~--------  284 (488)
                      +..+++.||.|++.|......+    .   ...            +.   ..++.++++|+|...|.+....        
T Consensus       469 E~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~  548 (815)
T PLN00142        469 DLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLH  548 (815)
T ss_pred             HHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhc
Confidence            5567889999999997765321    1   110            11   3488999999998876532200        


Q ss_pred             --------------------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC---Cc--
Q psy15555        285 --------------------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE---ED--  339 (488)
Q Consensus       285 --------------------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~---~~--  339 (488)
                                          ...++++++++||+.+.||++.+++|+.++.+..     ++++|+|+|++++.   .+  
T Consensus       549 n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~-----~~~~LVIVGgg~d~~~s~d~e  623 (815)
T PLN00142        549 PSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLR-----ELVNLVVVGGFIDPSKSKDRE  623 (815)
T ss_pred             ccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhC-----CCcEEEEEECCccccccccHH
Confidence                                1235678999999999999999999999987665     68999999987321   11  


Q ss_pred             -HHHHHHHHHHHHhcCCCCcEEEecCC----ChHHHHHHHHh-CcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc
Q psy15555        340 -EVCVKDMQDLCKHLSLENNVEFKVNL----PYEDMKKEFSE-GLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM  413 (488)
Q Consensus       340 -~~~~~~l~~~~~~~~l~~~v~~~g~~----~~~el~~~~~~-ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~  413 (488)
                       .+..+++.++++++++.++|.|+|..    +.+++..+++. +|+|+.||..|+||++++|||+||+|||+++.||+. 
T Consensus       624 e~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~-  702 (815)
T PLN00142        624 EIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA-  702 (815)
T ss_pred             HHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH-
Confidence             12235688899999999999998853    44678887774 689999999999999999999999999999999997 


Q ss_pred             ceeccCCCccccceecC--CHHHHHHHHHHH----HccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHH
Q psy15555        414 DIVIEDPETCRNGFLAC--DEVEYAQTIKLI----LHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       414 eiv~~~~~~~~~g~~~~--~~~~l~~~i~~l----l~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~  477 (488)
                      |++.++    .+|++++  |+++++++|.++    +. |++.+++|+++|++.+ ++|||+.++++++++.
T Consensus       703 EIV~dG----~tG~LV~P~D~eaLA~aI~~lLekLl~-Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~  768 (815)
T PLN00142        703 EIIVDG----VSGFHIDPYHGDEAANKIADFFEKCKE-DPSYWNKISDAGLQRIYECYTWKIYAERLLTLG  768 (815)
T ss_pred             HHhcCC----CcEEEeCCCCHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999998    9999986  899999998765    46 9999999999999998 9999999999999875

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-32  Score=264.40  Aligned_cols=327  Identities=17%  Similarity=0.137  Sum_probs=236.0

Q ss_pred             cEEEEeccCCC-----CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecc
Q psy15555         53 KTVAFFHPYCN-----AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR  127 (488)
Q Consensus        53 ~rI~~~~~~~~-----~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  127 (488)
                      |||+++.+.+.     ..||.++.+..++++|.++|  ++|.+++...+.......                ...  +..
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~~~----------------~~~--~~~   60 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTAAPLV----------------PVV--PEP   60 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCccccee----------------ecc--CCC
Confidence            89999987652     57789999999999999984  555555544222111000                000  000


Q ss_pred             ceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        128 KFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                      .....  .   ..............+++++.+||+||.+...+...  .....+.|++...|......            
T Consensus        61 ~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~--~~~~~~~~~v~~~h~~~~~~------------  121 (335)
T cd03802          61 LRLDA--P---GRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP--FARPLPVPVVTTLHGPPDPE------------  121 (335)
T ss_pred             ccccc--c---hhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh--hhcccCCCEEEEecCCCCcc------------
Confidence            00000  0   00011122234456778889999999887555443  33367889999888654211            


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCC
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTD  287 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~  287 (488)
                                  ..   .         ........+.+++.|+..++.+...    .++.+++|++|.+.+.+.    ..
T Consensus       122 ------------~~---~---------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~~----~~  169 (335)
T cd03802         122 ------------LL---K---------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPFR----GP  169 (335)
T ss_pred             ------------cc---h---------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCCC----CC
Confidence                        00   0         1123456789999999988877653    578999999998877652    23


Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcC-CCCcEEEecCCC
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLS-LENNVEFKVNLP  366 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~-l~~~v~~~g~~~  366 (488)
                      ++..++++|++.+.||.+.+++++++          .+++++++|.++..      +.+....++.. +.++|++.|+++
T Consensus       170 ~~~~i~~~Gr~~~~Kg~~~li~~~~~----------~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~~v~~~G~~~  233 (335)
T cd03802         170 KGDYLLFLGRISPEKGPHLAIRAARR----------AGIPLKLAGPVSDP------DYFYREIAPELLDGPDIEYLGEVG  233 (335)
T ss_pred             CCCEEEEEEeeccccCHHHHHHHHHh----------cCCeEEEEeCCCCH------HHHHHHHHHhcccCCcEEEeCCCC
Confidence            56789999999999999999998653          47899999998643      33333333332 467899999999


Q ss_pred             hHHHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHcc
Q psy15555        367 YEDMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHL  445 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~  445 (488)
                      ++++.++|+.+|++++||. .|++|++++|||++|+|||+++.++.. |++.++    .+|++++++++++++|.++.. 
T Consensus       234 ~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~-e~i~~~----~~g~l~~~~~~l~~~l~~l~~-  307 (335)
T cd03802         234 GAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVP-EVVEDG----VTGFLVDSVEELAAAVARADR-  307 (335)
T ss_pred             HHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCch-hheeCC----CcEEEeCCHHHHHHHHHHHhc-
Confidence            9999999999999999996 699999999999999999999999997 999887    899999999999999999876 


Q ss_pred             CHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        446 SQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       446 ~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      .+      .+++++.+ ++|||+.+++++.++|+
T Consensus       308 ~~------~~~~~~~~~~~~s~~~~~~~~~~~y~  335 (335)
T cd03802         308 LD------RAACRRRAERRFSAARMVDDYLALYR  335 (335)
T ss_pred             cH------HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            32      23456666 99999999999999874

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.6e-33  Score=277.46  Aligned_cols=396  Identities=15%  Similarity=0.106  Sum_probs=256.2

Q ss_pred             EEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhh---------------hcccccC
Q psy15555         54 TVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQ---------------RFNIVLP  115 (488)
Q Consensus        54 rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~  115 (488)
                      ||+++++...   ..||...++..|+++|+++  |++|.+++...+............               .......
T Consensus         1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~--G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (476)
T cd03791           1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKL--GHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPV   78 (476)
T ss_pred             CEEEEEccccccccCCcHHHHHHHHHHHHHHC--CCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEe
Confidence            5888876543   4788999999999999999  555555555433222111100000               0000001


Q ss_pred             CCeeEEEEeeccceeeccC------chhHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchhhhh-hhh------C
Q psy15555        116 DQVINFVYLYRRKFVEASL------YPYFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTYPLF-SYI------G  180 (488)
Q Consensus       116 ~~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~~~-~~~------~  180 (488)
                      .+ +.+..++.+.+..+..      ........++..+.....+.+++  .+|||||.+......++.. +..      .
T Consensus        79 ~g-v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~  157 (476)
T cd03791          79 DG-VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFK  157 (476)
T ss_pred             CC-ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCC
Confidence            22 5566555544332211      11111111122222333444544  7999999887544444432 222      3


Q ss_pred             CCeeEEEEeCCccchHH-HHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH
Q psy15555        181 GSKVACYIHYPTITKEM-LTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL  259 (488)
Q Consensus       181 ~~~~v~~~h~p~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~  259 (488)
                      ++|+++++|........ ............         .........+.....+++..+..+|.++++|+..++.+.+.
T Consensus       158 ~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~  228 (476)
T cd03791         158 NIKTVFTIHNLAYQGVFPLEALEDLGLPWE---------ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP  228 (476)
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHcCCCcc---------chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC
Confidence            78999999975321100 000000000000         00000000000011245567788999999999999888641


Q ss_pred             ---------h-ccCCceEEEcCCCCchhhhccCCCC----------------------------CCCCeEEEEeeccCCC
Q psy15555        260 ---------W-NCQLKTYKLYPPCDTEDLKKITHSK----------------------------TDGPVKIISVAQFRPE  301 (488)
Q Consensus       260 ---------~-~~~~k~~vi~~~~d~~~~~~~~~~~----------------------------~~~~~~i~~~g~~~~~  301 (488)
                               + ....++.+|+||+|.+.+.+.....                            .++.++++++||+.+.
T Consensus       229 ~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~  308 (476)
T cd03791         229 EFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQ  308 (476)
T ss_pred             CCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeecccc
Confidence                     1 1235899999999988776543210                            2567899999999999


Q ss_pred             CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEE
Q psy15555        302 KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGL  381 (488)
Q Consensus       302 k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v  381 (488)
                      ||++.+++|+.++.++       +++|+++|.++.    ++.+++++++++.  .+++.+.+..+.+++..+|+.||+++
T Consensus       309 Kg~~~li~a~~~l~~~-------~~~lvi~G~g~~----~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~aDv~l  375 (476)
T cd03791         309 KGIDLLLEALPELLEL-------GGQLVILGSGDP----EYEEALRELAARY--PGRVAVLIGYDEALAHLIYAGADFFL  375 (476)
T ss_pred             ccHHHHHHHHHHHHHc-------CcEEEEEecCCH----HHHHHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHhCCEEE
Confidence            9999999999998763       589999998842    3446677776665  46787766667777889999999999


Q ss_pred             EcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCC---ccccceecC--CHHHHHHHHHHHHc--cCHHHHHHHH
Q psy15555        382 HAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPE---TCRNGFLAC--DEVEYAQTIKLILH--LSQDTKTRIS  454 (488)
Q Consensus       382 ~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~---~~~~g~~~~--~~~~l~~~i~~ll~--~~~~~~~~~~  454 (488)
                      +||..|++|++.+|||++|+|||+++.+|.. |++.++ .   +..+|++++  |+++++++|.++++  .+++.+.+++
T Consensus       376 ~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~-e~v~~~-~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~  453 (476)
T cd03791         376 MPSRFEPCGLTQMYAMRYGTVPIVRATGGLA-DTVIDY-NEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQ  453 (476)
T ss_pred             CCCCCCCCcHHHHHHhhCCCCCEECcCCCcc-ceEeCC-cCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            9999999999999999999999999999997 888887 1   012899986  89999999999874  1567777777


Q ss_pred             HHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        455 QNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       455 ~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +++.+  +.|||+.+++++.++|+
T Consensus       454 ~~~~~--~~fsw~~~a~~~~~~y~  475 (476)
T cd03791         454 RNAMA--QDFSWDRSAKEYLELYR  475 (476)
T ss_pred             HHHhc--cCCChHHHHHHHHHHHh
Confidence            76654  67999999999999986

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.7e-32  Score=265.46  Aligned_cols=362  Identities=18%  Similarity=0.206  Sum_probs=261.1

Q ss_pred             EEEeccCCCC--CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         55 VAFFHPYCNA--GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        55 I~~~~~~~~~--~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |+++++..+.  .||+++.+..++++|.+.+  ++|.+++...................       . ..........  
T Consensus         1 iLii~~~~p~~~~~g~~~~~~~~~~~l~~~g--~~v~v~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~--   68 (377)
T cd03798           1 ILVISSLYPPPNNGGGGIFVKELARALAKRG--VEVTVLAPGPWGPKLLDLLKGRLVGV-------E-RLPVLLPVVP--   68 (377)
T ss_pred             CeEeccCCCCCCCchHHHHHHHHHHHHHHCC--CceEEEecCCCCCCchhhcccccccc-------c-ccccCcchhh--
Confidence            4566666665  5789999999999999885  45555554432221111100000000       0 0000000000  


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCCccchhhhh--hhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALL--SFQPDIYIDTMGYAFTYPLF--SYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~~~--~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                       ...   .............+.++  ..+||+|+.+..++......  ....++|++...|......             
T Consensus        69 -~~~---~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------  131 (377)
T cd03798          69 -LLK---GPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL-------------  131 (377)
T ss_pred             -ccc---cchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc-------------
Confidence             000   00111122234556777  88999988775444333222  2244679999998654211             


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC-----
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-----  283 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~-----  283 (488)
                                 ....     .......+..++.+|.+++.|+.+++.+.+.+....++.+++|++|...+.+...     
T Consensus       132 -----------~~~~-----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  195 (377)
T cd03798         132 -----------LPRK-----RLLRALLRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARK  195 (377)
T ss_pred             -----------cCch-----hhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHh
Confidence                       0000     0233455567789999999999999999987544568999999999877655432     


Q ss_pred             -CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        284 -SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       284 -~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                       ....+++.++++|++.+.||++.++++++.+.++.     ++++++++|.++..      +.+++.+++.++.++|.+.
T Consensus       196 ~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~-----~~~~l~i~g~~~~~------~~~~~~~~~~~~~~~v~~~  264 (377)
T cd03798         196 LGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKKR-----PDVHLVIVGDGPLR------EALEALAAELGLEDRVTFL  264 (377)
T ss_pred             ccCCCCceEEEEeccCccccCHHHHHHHHHHHHhcC-----CCeEEEEEcCCcch------HHHHHHHHhcCCcceEEEe
Confidence             23346789999999999999999999999998776     79999999988643      6677888888888999999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIK  440 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~  440 (488)
                      |+++++|+.++|+.||+++.||..|++|.+++|||++|+|||+++.++.. +++.++    .+|++++  |+++++++|.
T Consensus       265 g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~-~~~~~~----~~g~~~~~~~~~~l~~~i~  339 (377)
T cd03798         265 GAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIP-EIITDG----ENGLLVPPGDPEALAEAIL  339 (377)
T ss_pred             CCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCChH-HHhcCC----cceeEECCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999886 888887    7788876  9999999999


Q ss_pred             HHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        441 LILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++++ +++.  ++++++++.+ ++|||+.+++++.++++++
T Consensus       340 ~~~~-~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l  377 (377)
T cd03798         340 RLLA-DPWL--RLGRAARRRVAERFSWENVAERLLELYREV  377 (377)
T ss_pred             HHhc-CcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence            9998 7776  6777787777 9999999999999998763

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-31  Score=263.02  Aligned_cols=372  Identities=18%  Similarity=0.212  Sum_probs=257.2

Q ss_pred             EEEEeccCCC-CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCN-AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~-~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+++.+... ..||.++.+..++++|.++|  ++|.+++.............    ........ +.+..++.......
T Consensus         1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~   73 (394)
T cd03794           1 KILILSQYFPPELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG----YKREEVDG-VRVHRVPLPPYKKN   73 (394)
T ss_pred             CEEEEecccCCccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc----ceEEecCC-eEEEEEecCCCCcc
Confidence            5788876654 44778899999999999984  55555554432221100000    00011122 44544443322211


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHh--hhcCCcEEEecCC-ccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEAL--LSFQPDIYIDTMG-YAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l--~~~~pDiii~~~~-~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                      ..+.+   ....+.........+  +..+||+|+.+.. ......  ..+...++|++.++|......      ...   
T Consensus        74 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------~~~---  141 (394)
T cd03794          74 GLLKR---LLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPES------AVA---  141 (394)
T ss_pred             chHHH---HHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchh------HHH---
Confidence            11111   111111122222333  4788999887752 222222  222244789999888532111      000   


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----  283 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----  283 (488)
                               . ..........+....+++..++.+|.++++|+.+++.+........++.+++|+++...+.+...    
T Consensus       142 ---------~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  211 (394)
T cd03794         142 ---------L-GLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESL  211 (394)
T ss_pred             ---------c-cCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhh
Confidence                     0 00111112234455677788899999999999999999854444568999999999876655431    


Q ss_pred             ---CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        284 ---SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       284 ---~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                         ....++.+++++|++...||++.+++++.++.+.      ++++++++|.++..      +.+++.+...++ ++|.
T Consensus       212 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~------~~~~l~i~G~~~~~------~~~~~~~~~~~~-~~v~  278 (394)
T cd03794         212 RKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR------PDIRFLIVGDGPEK------EELKELAKALGL-DNVT  278 (394)
T ss_pred             hhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc------CCeEEEEeCCcccH------HHHHHHHHHcCC-CcEE
Confidence               1335678999999999999999999999999764      58999999998643      566666666664 5899


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcC-----CccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHF-----GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEV  433 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~-----g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~  433 (488)
                      ++|.++.+++.++|+.||+++.||..|++     |.+++|||++|+|||+++.++.. +++.++    .+|++++  |++
T Consensus       279 ~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~-~~~~~~----~~g~~~~~~~~~  353 (394)
T cd03794         279 FLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESA-ELVEEA----GAGLVVPPGDPE  353 (394)
T ss_pred             EeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCch-hhhccC----CcceEeCCCCHH
Confidence            99999999999999999999999987765     66789999999999999999986 888776    7888876  899


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHH
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGF  473 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~  473 (488)
                      +++++|.+++. |++.++++++++++.+ ++|||+.+++++
T Consensus       354 ~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         354 ALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL  393 (394)
T ss_pred             HHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence            99999999998 9999999999999999 699999999876

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.7e-32  Score=260.45  Aligned_cols=349  Identities=17%  Similarity=0.168  Sum_probs=243.7

Q ss_pred             EEEEeccCCCCC--CCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         54 TVAFFHPYCNAG--GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        54 rI~~~~~~~~~~--gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      ||+++.+.....  ||+++++..++++|.+++++  |.+++............           .. .............
T Consensus         1 kIl~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~--v~v~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~   66 (359)
T cd03823           1 RILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHE--VAVLTAGEDPPRQDKEV-----------IG-VVVYGRPIDEVLR   66 (359)
T ss_pred             CeeEEcccCCcccccchHHHHHHHHHHHHhcCCc--eEEEeCCCCCCCccccc-----------cc-ceeeccccccccC
Confidence            688887776644  78999999999999988544  44444432221110000           00 1111100000000


Q ss_pred             ccC-ch-hHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhh--hhhCCCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        132 ASL-YP-YFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLF--SYIGGSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       132 ~~~-~~-~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~--~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                      ... .. ................+.+++.+||+|+.+..........  ....++|++...|......            
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------------  134 (359)
T cd03823          67 SALPRDLFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------------  134 (359)
T ss_pred             CCchhhhhHHHhccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------------
Confidence            000 00 0001111122234466778889999998776432222221  2245789999888542100            


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCC
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTD  287 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~  287 (488)
                                    ....           ......|.+++.|+..++.+.+.+..+.++.+++|++|...+.+.......
T Consensus       135 --------------~~~~-----------~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~  189 (359)
T cd03823         135 --------------PRQG-----------LFKKGGDAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPG  189 (359)
T ss_pred             --------------chhh-----------hhccCCCEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCC
Confidence                          0000           011223999999999999999876555689999999998877654432345


Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      ++++++++|++.+.||++.++++++.+.+       ++++++++|.++..      .......   +..++|.+.|+++.
T Consensus       190 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~-------~~~~l~i~G~~~~~------~~~~~~~---~~~~~v~~~g~~~~  253 (359)
T cd03823         190 GRLRFGFIGQLTPHKGVDLLLEAFKRLPR-------GDIELVIVGNGLEL------EEESYEL---EGDPRVEFLGAYPQ  253 (359)
T ss_pred             CceEEEEEecCccccCHHHHHHHHHHHHh-------cCcEEEEEcCchhh------hHHHHhh---cCCCeEEEeCCCCH
Confidence            67899999999999999999999999865       38899999998643      1111111   44678999999999


Q ss_pred             HHHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHc
Q psy15555        368 EDMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILH  444 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~  444 (488)
                      +++..+|+.||+++.||. .|++|++++|||++|+|||+++.++.. +++.++    .+|++++  |.+++++++.++++
T Consensus       254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~----~~g~~~~~~d~~~l~~~i~~l~~  328 (359)
T cd03823         254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMA-ELVRDG----VNGLLFPPGDAEDLAAALERLID  328 (359)
T ss_pred             HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHH-HHhcCC----CcEEEECCCCHHHHHHHHHHHHh
Confidence            999999999999999996 799999999999999999999998886 888887    7899876  79999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        445 LSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       445 ~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                       +++.++++++++++....   +.+++++.++|+
T Consensus       329 -~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  358 (359)
T cd03823         329 -DPDLLERLRAGIEPPRSI---EDQAEEYLKLYR  358 (359)
T ss_pred             -ChHHHHHHHHhHHHhhhH---HHHHHHHHHHhh
Confidence             999999999999866533   888888888875

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.2e-32  Score=260.60  Aligned_cols=339  Identities=21%  Similarity=0.285  Sum_probs=247.7

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++++... .||+++++..++++|.+.++++.++..........  .......        . .........      
T Consensus         1 kIl~~~~~~~-~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~--~~~~~~~--------~-~~~~~~~~~------   62 (353)
T cd03811           1 KILFVIPSLG-GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLE--LLPSNVK--------L-IPVRVLKLK------   62 (353)
T ss_pred             CeEEEeeccc-CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccc--ccccchh--------h-hceeeeecc------
Confidence            6888887766 67799999999999988854444444333321110  0000000        0 000000000      


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCC-ccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMG-YAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~-~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~  212 (488)
                      ...       .........+.++..+||+++.+.. ++..+..+....++|++.++|......                 
T Consensus        63 ~~~-------~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------------  118 (353)
T cd03811          63 SLR-------DLLAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLSLE-----------------  118 (353)
T ss_pred             ccc-------chhHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcchhh-----------------
Confidence            000       0111234566778889999987765 444444333223689999999654211                 


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCCC-----CC
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITHS-----KT  286 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~~-----~~  286 (488)
                             .......  .   ...+..++.+|.+++.|+.+++.+.+.++. ..++.+++|++|...+......     ..
T Consensus       119 -------~~~~~~~--~---~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~  186 (353)
T cd03811         119 -------LKRKLRL--L---LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIP  186 (353)
T ss_pred             -------hccchhH--H---HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCC
Confidence                   0000000  0   355668899999999999999999998775 4589999999998776554432     24


Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      .++++++++|++.+.||++.++++++.+.++.     ++++++++|.++..      +++++.+++.++.++|.+.|.. 
T Consensus       187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~-----~~~~l~i~G~~~~~------~~~~~~~~~~~~~~~v~~~g~~-  254 (353)
T cd03811         187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEG-----PDARLVILGDGPLR------EELEALAKELGLADRVHFLGFQ-  254 (353)
T ss_pred             CCceEEEEEecchhhcChHHHHHHHHHhhhcC-----CCceEEEEcCCccH------HHHHHHHHhcCCCccEEEeccc-
Confidence            56789999999999999999999999998876     79999999988643      6777888899988999999997 


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHH---HHHHHH
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEY---AQTIKL  441 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l---~~~i~~  441 (488)
                       +++.++|+.||+++.||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |.+++   .+++..
T Consensus       255 -~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~-e~i~~~----~~g~~~~~~~~~~~~~~~~~i~~  328 (353)
T cd03811         255 -SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPR-EILEDG----ENGLLVPVGDEAALAAAALALLD  328 (353)
T ss_pred             -CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChH-HHhcCC----CceEEECCCCHHHHHHHHHHHHh
Confidence             789999999999999999999999999999999999999999886 999888    8999986  77777   788888


Q ss_pred             HHccCHHHHHHHHHHHHHHH-hhcC
Q psy15555        442 ILHLSQDTKTRISQNAVSSV-DRFS  465 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~-~~~s  465 (488)
                      +.. +++.+.++++++++.+ ++||
T Consensus       329 ~~~-~~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         329 LLL-DPELRERLAAAARERVAREYS  352 (353)
T ss_pred             ccC-ChHHHHHHHHHHHHHHHHHhc
Confidence            888 8999999999777666 7765

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=7.8e-32  Score=266.70  Aligned_cols=281  Identities=14%  Similarity=0.246  Sum_probs=215.5

Q ss_pred             HHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHH
Q psy15555        153 EALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFA  232 (488)
Q Consensus       153 ~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (488)
                      +.|...++||+|.........+++.....+|.++.+|......                     . ........+...+.
T Consensus       205 ~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~---------------------~-~~~~~~~~~~~~y~  262 (500)
T TIGR02918       205 KQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSE---------------------S-ATNETYILWNNYYE  262 (500)
T ss_pred             HHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcC---------------------c-cCcchhHHHHHHHH
Confidence            3345568998886543333334555456789999999543111                     0 00000000111111


Q ss_pred             HHHHHHhcccCEEEEcChhHHHHHHHHhc----cCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHH
Q psy15555        233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWN----CQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQL  308 (488)
Q Consensus       233 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~----~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll  308 (488)
                      ... ...+.+|.+++.|+..++.+.+.++    ...++.++|++++.....+.   ...++..++++||+.++||++.++
T Consensus       263 ~~~-~~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~---~~r~~~~il~vGrl~~~Kg~~~li  338 (500)
T TIGR02918       263 YQF-SNADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE---QERKPFSIITASRLAKEKHIDWLV  338 (500)
T ss_pred             HHH-hchhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc---cccCCeEEEEEeccccccCHHHHH
Confidence            111 1346789999999998888876543    24578999999764433321   123457899999999999999999


Q ss_pred             HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCc
Q psy15555        309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEH  388 (488)
Q Consensus       309 ~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~  388 (488)
                      +|+.++.++.     |+++|.|+|.|+..      ++++++++++++.++|.+.|..   ++.++|+.||+++.||..|+
T Consensus       339 ~A~~~l~~~~-----p~~~l~i~G~G~~~------~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~~Eg  404 (500)
T TIGR02918       339 KAVVKAKKSV-----PELTFDIYGEGGEK------QKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSASTSEG  404 (500)
T ss_pred             HHHHHHHhhC-----CCeEEEEEECchhH------HHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCcccc
Confidence            9999999887     89999999999632      7899999999999999999975   68899999999999999999


Q ss_pred             CCccHHHHHHcCCcEEEeCCC-CCccceeccCCCccccceecC-C---------HHHHHHHHHHHHccCHHHHHHHHHHH
Q psy15555        389 FGIGIVECMAAGLIMIAHKSG-GPKMDIVIEDPETCRNGFLAC-D---------EVEYAQTIKLILHLSQDTKTRISQNA  457 (488)
Q Consensus       389 ~g~~~lEa~a~G~PvI~~~~~-~~~~eiv~~~~~~~~~g~~~~-~---------~~~l~~~i~~ll~~~~~~~~~~~~~a  457 (488)
                      ||++++||||||+|||+++.+ |+. |++.++    .+|++++ +         +++++++|.++++ + +.+.+|+++|
T Consensus       405 fgl~~lEAma~G~PVI~~dv~~G~~-eiI~~g----~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~-~~~~~~~~~a  477 (500)
T TIGR02918       405 FGLTLMEAVGSGLGMIGFDVNYGNP-TFIEDN----KNGYLIPIDEEEDDEDQIITALAEKIVEYFN-S-NDIDAFHEYS  477 (500)
T ss_pred             ccHHHHHHHHhCCCEEEecCCCCCH-HHccCC----CCEEEEeCCccccchhHHHHHHHHHHHHHhC-h-HHHHHHHHHH
Confidence            999999999999999999985 776 999998    9999986 1         8889999999995 4 4689999999


Q ss_pred             HHHHhhcCHHHHHHHHHHHHHHh
Q psy15555        458 VSSVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       458 ~~~~~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++.+++|||+.++++|.++++++
T Consensus       478 ~~~a~~fs~~~v~~~w~~ll~~~  500 (500)
T TIGR02918       478 YQIAEGFLTANIIEKWKKLVREV  500 (500)
T ss_pred             HHHHHhcCHHHHHHHHHHHHhhC
Confidence            99889999999999999998764

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-31  Score=259.49  Aligned_cols=345  Identities=16%  Similarity=0.118  Sum_probs=241.6

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||++++.. ...||.++++..++++|.++||++.++.....          .                           
T Consensus         1 MkIl~~~~~-~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------~---------------------------   42 (365)
T cd03825           1 MKVLHLNTS-DISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------A---------------------------   42 (365)
T ss_pred             CeEEEEecC-CCCCcHHHHHHHHHHHHHhcCCceeEEEeecc----------h---------------------------
Confidence            899998765 34578999999999999999655555543322          0                           


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchh--hhhhhh-CCCeeEEEEeCCccchHHHHHHHhhhhcc-
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTY--PLFSYI-GGSKVACYIHYPTITKEMLTRVARRVITH-  208 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~--~~~~~~-~~~~~v~~~h~p~~~~d~~~~~~~~~~~~-  208 (488)
                                        ..+.++..+||+||.+......+  ..+... .++|++..+|.......-.. .......+ 
T Consensus        43 ------------------~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~~hd~~~~~~~~~-~~~~~~~~~  103 (365)
T cd03825          43 ------------------LISKIEIINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWTLHDMWPFTGGCH-YPGGCDRYK  103 (365)
T ss_pred             ------------------hhhChhcccCCEEEEEccccCccCHHHHHHHHcCCCEEEEcccCcccccccC-Ccccccccc
Confidence                              12245577899988654222221  122212 48899998885422100000 00000000 


Q ss_pred             -cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCC---
Q psy15555        209 -NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITH---  283 (488)
Q Consensus       209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~---  283 (488)
                       ..............  ......+..........++.++++|++.++.+.+.+.. ..++.+++||+|.+.+.+...   
T Consensus       104 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~  181 (365)
T cd03825         104 TECGNCPQLGSYPEK--DLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREA  181 (365)
T ss_pred             ccCCCCCCCCCCCcc--cHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHH
Confidence             00000000000000  11112222222223366789999999999999886533 358999999999876643321   


Q ss_pred             ----CCCCCCeEEEEeeccCC--CCChHHHHHHHHHhHHh-hhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        284 ----SKTDGPVKIISVAQFRP--EKDHPLQLRAMYQLRQI-ISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       284 ----~~~~~~~~i~~~g~~~~--~k~~~~ll~a~~~l~~~-~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                          ..+.++.+++++|+...  .||++.+++|++.+.++ .     ++++++++|+++..        ...     ++.
T Consensus       182 ~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~-----~~~~~~i~G~~~~~--------~~~-----~~~  243 (365)
T cd03825         182 RKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWK-----DDIELVVFGASDPE--------IPP-----DLP  243 (365)
T ss_pred             HHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccC-----CCeEEEEeCCCchh--------hhc-----cCC
Confidence                12344566777777655  89999999999999875 3     68999999988632        111     345


Q ss_pred             CcEEEecCCC-hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHH
Q psy15555        357 NNVEFKVNLP-YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEV  433 (488)
Q Consensus       357 ~~v~~~g~~~-~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~  433 (488)
                      +++.+.|+++ .+++..+|+.||+++.||..|++|.+++|||++|+|||+++.++.. |++.++    .+|++++  |.+
T Consensus       244 ~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~-e~~~~~----~~g~~~~~~~~~  318 (365)
T cd03825         244 FPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIP-DIVDHG----VTGYLAKPGDPE  318 (365)
T ss_pred             CceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCCh-hheeCC----CceEEeCCCCHH
Confidence            7899999998 7899999999999999999999999999999999999999999886 888887    7899876  899


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++++++.++++ +++.+.++++++++.+ ++|||+.+++++.++|+++
T Consensus       319 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~  365 (365)
T cd03825         319 DLAEGIEWLLA-DPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL  365 (365)
T ss_pred             HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence            99999999999 9999999999999998 8999999999999999864

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=7.3e-31  Score=252.95  Aligned_cols=362  Identities=14%  Similarity=0.066  Sum_probs=230.0

Q ss_pred             cccEEEEeccC-CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCC--------------hhHHHHHhhhhcccccC
Q psy15555         51 VLKTVAFFHPY-CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS--------------PSEIIKRAHQRFNIVLP  115 (488)
Q Consensus        51 ~~~rI~~~~~~-~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~  115 (488)
                      ++|||++++.. .+..+|.......++..|.++|+ |+|.++.......              +.+.....+....    
T Consensus         3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~----   77 (462)
T PLN02846          3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLE----   77 (462)
T ss_pred             CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhhhhhhhcc----
Confidence            46999998754 44555787888899999999951 4555555432110              0000000000110    


Q ss_pred             CCee-EEEEeeccceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhh-CCCeeEEEEeCC
Q psy15555        116 DQVI-NFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYI-GGSKVACYIHYP  191 (488)
Q Consensus       116 ~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~-~~~~~v~~~h~p  191 (488)
                      .. + .+-.++...+  +..+..-.   ..+.....+.+.+++++|||||.++.+.....  ..++. +..+++...|..
T Consensus        78 ~~-v~r~~s~~~p~y--p~r~~~~~---r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~vV~tyHT~  151 (462)
T PLN02846         78 ER-ISFLPKFSIKFY--PGKFSTDK---RSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIVHTN  151 (462)
T ss_pred             Ce-EEEecccccccC--cccccccc---cccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCcEEEEECCC
Confidence            00 1 1111111111  01000000   00001134677888999999997775444331  11222 123355567753


Q ss_pred             ccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcC
Q psy15555        192 TITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYP  271 (488)
Q Consensus       192 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~  271 (488)
                           ...++...           .+   ........+....+..+  .++|.+++.|+.+.+ +.+      ...+..+
T Consensus       152 -----y~~Y~~~~-----------~~---g~~~~~l~~~~~~~~~r--~~~d~vi~pS~~~~~-l~~------~~i~~v~  203 (462)
T PLN02846        152 -----YLEYVKRE-----------KN---GRVKAFLLKYINSWVVD--IYCHKVIRLSAATQD-YPR------SIICNVH  203 (462)
T ss_pred             -----hHHHHHHh-----------cc---chHHHHHHHHHHHHHHH--HhcCEEEccCHHHHH-Hhh------CEEecCc
Confidence                 22222110           00   01111122222222111  137999999986655 433      1334457


Q ss_pred             CCCchhhhccCCC-----CCCC--CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHH
Q psy15555        272 PCDTEDLKKITHS-----KTDG--PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVK  344 (488)
Q Consensus       272 ~~d~~~~~~~~~~-----~~~~--~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~  344 (488)
                      |+|.+.+.+....     ...+  .+.++|+||+..+||++.+++|++.+.+..     ++++|+|+|+||+.      +
T Consensus       204 GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~-----~~~~l~ivGdGp~~------~  272 (462)
T PLN02846        204 GVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKEL-----SGLEVDLYGSGEDS------D  272 (462)
T ss_pred             eechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhC-----CCeEEEEECCCccH------H
Confidence            9998877644211     1122  246899999999999999999999998876     79999999999865      7


Q ss_pred             HHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccc
Q psy15555        345 DMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCR  424 (488)
Q Consensus       345 ~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~  424 (488)
                      ++++.++++++...+ |.|..+.   .++|+.+|+||+||..|++|++++||||+|+|||+++.++.  +++.++    .
T Consensus       273 ~L~~~a~~l~l~~~v-f~G~~~~---~~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~--~~v~~~----~  342 (462)
T PLN02846        273 EVKAAAEKLELDVRV-YPGRDHA---DPLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSN--EFFKQF----P  342 (462)
T ss_pred             HHHHHHHhcCCcEEE-ECCCCCH---HHHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCCc--ceeecC----C
Confidence            899999998876444 7776433   37999999999999999999999999999999999999873  888888    8


Q ss_pred             cceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        425 NGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       425 ~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +|+.++|.+++++++.+++. ++.  .+++.+++   ++|||+..++++++.++
T Consensus       343 ng~~~~~~~~~a~ai~~~l~-~~~--~~~~~~a~---~~~SWe~~~~~l~~~~~  390 (462)
T PLN02846        343 NCRTYDDGKGFVRATLKALA-EEP--APLTDAQR---HELSWEAATERFLRVAD  390 (462)
T ss_pred             ceEecCCHHHHHHHHHHHHc-cCc--hhHHHHHH---HhCCHHHHHHHHHHHhc
Confidence            99999999999999999998 432  33333333   69999999999999987

>KOG1111|consensus

Probab=100.00  E-value=1.2e-31  Score=237.28  Aligned_cols=362  Identities=15%  Similarity=0.139  Sum_probs=265.3

Q ss_pred             EEEEeccC-CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPY-CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~-~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      +|+.+.+. ++..||.|...+.+.+.|-+.  ++.|++.|...+..           .+++...++..++++|.......
T Consensus         2 ~i~mVsdff~P~~ggveshiy~lSq~li~l--ghkVvvithayg~r-----------~girylt~glkVyylp~~v~~n~   68 (426)
T KOG1111|consen    2 RILMVSDFFYPSTGGVESHIYALSQCLIRL--GHKVVVITHAYGNR-----------VGIRYLTNGLKVYYLPAVVGYNQ   68 (426)
T ss_pred             cceeeCcccccCCCChhhhHHHhhcchhhc--CCeEEEEeccccCc-----------cceeeecCCceEEEEeeeeeecc
Confidence            56766654 457788999999999999999  78888887765432           12222233366777766544433


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhh---hhhCCCeeEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLF---SYIGGSKVACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~---~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                      ..++-+      +..+...+..+.+++..|+|.+..+.+...-+   ....|-+++++-|.-+-..|             
T Consensus        69 tT~ptv------~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlfGfad-------------  129 (426)
T KOG1111|consen   69 TTFPTV------FSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLFGFAD-------------  129 (426)
T ss_pred             cchhhh------hccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccccccc-------------
Confidence            333221      11122344556677899999887655543311   11347888888885321111             


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-cCCceEEEcCCCCchhhhccCCCCC-C
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-CQLKTYKLYPPCDTEDLKKITHSKT-D  287 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~k~~vi~~~~d~~~~~~~~~~~~-~  287 (488)
                               ..+       .....+....+...|.+||+|...++...-... .+.++.+|||.++...|.|.....+ .
T Consensus       130 ---------~~s-------i~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S~  193 (426)
T KOG1111|consen  130 ---------IGS-------ILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPSA  193 (426)
T ss_pred             ---------hhh-------hhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCCC
Confidence                     111       111223445778899999999887766543333 2458999999999999988554433 3


Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      +...++.+||+-.+||++.+++++.++.+++     |+++++|+|+||..      ..+++..+++.+.++|+++|.+++
T Consensus       194 ~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~-----p~vrfii~GDGPk~------i~lee~lEk~~l~~rV~~lG~v~h  262 (426)
T KOG1111|consen  194 DIITIVVASRLVYRKGIDLLLEIIPSVCDKH-----PEVRFIIIGDGPKR------IDLEEMLEKLFLQDRVVMLGTVPH  262 (426)
T ss_pred             CeeEEEEEeeeeeccchHHHHHHHHHHHhcC-----CCeeEEEecCCccc------chHHHHHHHhhccCceEEecccch
Confidence            4488999999999999999999999999998     99999999999955      678888888899999999999999


Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccC
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLS  446 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~  446 (488)
                      +++.+.|.+.|+|+++|..|.||++++|||+||+||+++..||.+ |++-+.     .-...+ +++++++++++.+. .
T Consensus       263 ~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIp-eVLP~d-----~i~~~~~~~~dl~~~v~~ai~-~  335 (426)
T KOG1111|consen  263 DRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIP-EVLPED-----MITLGEPGPDDLVGAVEKAIT-K  335 (426)
T ss_pred             HHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCcc-ccCCcc-----ceeccCCChHHHHHHHHHHHH-H
Confidence            999999999999999999999999999999999999999999998 887543     122333 78888888888776 2


Q ss_pred             HHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        447 QDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       447 ~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                         +....+...+.+ +.|+|+..+++.+++|.++...+
T Consensus       336 ---~~~~p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~  371 (426)
T KOG1111|consen  336 ---LRTLPLEFHDRVKKMYSWKDVAERTEKVYDRAATTS  371 (426)
T ss_pred             ---hccCchhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence               222233445555 88999999999999999987655

>PLN02275 transferase, transferring glycosyl groups

Probab=99.97  E-value=2.5e-29  Score=243.31  Aligned_cols=253  Identities=17%  Similarity=0.240  Sum_probs=186.4

Q ss_pred             hhhcCCcEEEecCCccchh---h-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHH
Q psy15555        155 LLSFQPDIYIDTMGYAFTY---P-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKV  230 (488)
Q Consensus       155 l~~~~pDiii~~~~~~~~~---~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (488)
                      .+..+||+||.+...+...   . .+.+..+.|++++.|...  ..+    ..            ..   ...+....+.
T Consensus        96 ~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~--~~~----~~------------~~---~~~~~~~~~~  154 (371)
T PLN02275         96 VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFG--YTL----LA------------LS---LGRSHPLVRL  154 (371)
T ss_pred             hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCcc--HHH----Hh------------cc---cCCCCHHHHH
Confidence            3568999999765333221   1 233356789988877431  000    00            00   0011223345


Q ss_pred             HHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC---CCCCCeEEEEeeccCCCCChHHH
Q psy15555        231 FALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS---KTDGPVKIISVAQFRPEKDHPLQ  307 (488)
Q Consensus       231 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~---~~~~~~~i~~~g~~~~~k~~~~l  307 (488)
                      ..++++.+.+.+|.++++|+.+++.+.+.++.+  +.+++|+. .+.+.+....   ..++..+++++|++.+.||++.+
T Consensus       155 ~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g~~--i~vi~n~~-~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~~l  231 (371)
T PLN02275        155 YRWYERHYGKMADGHLCVTKAMQHELDQNWGIR--ATVLYDQP-PEFFRPASLEIRLRPNRPALVVSSTSWTPDEDFGIL  231 (371)
T ss_pred             HHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCC--eEEECCCC-HHHcCcCCchhcccCCCcEEEEEeCceeccCCHHHH
Confidence            566778888999999999999999998865654  78999984 4555443211   12344578899999999999999


Q ss_pred             HHHHHHhHHhhhh------------hccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec-CCChHHHHHHH
Q psy15555        308 LRAMYQLRQIISE------------ELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV-NLPYEDMKKEF  374 (488)
Q Consensus       308 l~a~~~l~~~~~~------------~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g-~~~~~el~~~~  374 (488)
                      ++|+..+..+...            ...|+++|+|+|+|+..      +++++.++++++.+ +++.+ +++.+++..+|
T Consensus       232 i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~------~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l  304 (371)
T PLN02275        232 LEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK------AMYEEKISRLNLRH-VAFRTMWLEAEDYPLLL  304 (371)
T ss_pred             HHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCH------HHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHH
Confidence            9999887421100            00178999999999754      88999999999875 77765 68999999999


Q ss_pred             HhCcEEEEcC---CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHH
Q psy15555        375 SEGLIGLHAM---WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLIL  443 (488)
Q Consensus       375 ~~ad~~v~~s---~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll  443 (488)
                      +.||+++.++   ..|++|.+++||||||+|||+++.++.. |+++++    .+|++++|+++++++|.+++
T Consensus       305 ~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~-eiv~~g----~~G~lv~~~~~la~~i~~l~  371 (371)
T PLN02275        305 GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG-ELVKDG----KNGLLFSSSSELADQLLELL  371 (371)
T ss_pred             HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH-HHccCC----CCeEEECCHHHHHHHHHHhC
Confidence            9999998753   3478999999999999999999999986 999988    89999999999999998874

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=99.97  E-value=9.7e-30  Score=248.96  Aligned_cols=220  Identities=18%  Similarity=0.240  Sum_probs=192.1

Q ss_pred             HHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHh
Q psy15555        236 SHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQL  314 (488)
Q Consensus       236 ~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l  314 (488)
                      +.+++++|.++++|+..++.+.+.++. ..++.++++|++...+...  ...++.+.++++|++.+.||++.+++|+.++
T Consensus       178 ~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l  255 (407)
T cd04946         178 RYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIKALAAL  255 (407)
T ss_pred             HHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence            346788999999999999999988765 3578899999987655432  2235678999999999999999999999999


Q ss_pred             HHhhhhhccC--ceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHh--CcEEEEcCCCCcCC
Q psy15555        315 RQIISEELWD--NLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSE--GLIGLHAMWNEHFG  390 (488)
Q Consensus       315 ~~~~~~~~~~--~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~--ad~~v~~s~~e~~g  390 (488)
                      .+..     |  ++.++++|+|+..      +++++++++.+..++|.|.|+++++|+.++|+.  +|+++.+|..|++|
T Consensus       256 ~~~~-----p~~~l~~~iiG~g~~~------~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p  324 (407)
T cd04946         256 AKAR-----PSIKIKWTHIGGGPLE------DTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLP  324 (407)
T ss_pred             HHhC-----CCceEEEEEEeCchHH------HHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCcccccc
Confidence            8876     4  5677889988643      678888888887889999999999999999986  67899999999999


Q ss_pred             ccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC---CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCH
Q psy15555        391 IGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC---DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSM  466 (488)
Q Consensus       391 ~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~---~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~  466 (488)
                      ++++|||++|+|||+++.+|.. |++.++    .+|++++   |+++++++|.++++ |++.+++|+++|++.+ ++||+
T Consensus       325 ~~llEAma~G~PVIas~vgg~~-e~i~~~----~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ar~~~~~~f~~  398 (407)
T cd04946         325 VSIMEAMSFGIPVIATNVGGTP-EIVDNG----GNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREKAREKWEENFNA  398 (407)
T ss_pred             HHHHHHHHcCCCEEeCCCCCcH-HHhcCC----CcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCH
Confidence            9999999999999999999997 999888    8898874   68999999999999 9999999999999999 99999


Q ss_pred             HHHHHHHH
Q psy15555        467 EEFKNGFL  474 (488)
Q Consensus       467 ~~~~~~~~  474 (488)
                      +...+++.
T Consensus       399 ~~~~~~~~  406 (407)
T cd04946         399 SKNYREFA  406 (407)
T ss_pred             HHhHHHhc
Confidence            99988875

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.97  E-value=4.1e-30  Score=250.51  Aligned_cols=273  Identities=22%  Similarity=0.326  Sum_probs=216.2

Q ss_pred             hcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHH
Q psy15555        157 SFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYS  236 (488)
Q Consensus       157 ~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (488)
                      ..++|++|.+.......++.......+.+.++|......               .    .....+..+..+...    . 
T Consensus        97 ~~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------------~----~~~~~~~~~~~~~~~----~-  152 (372)
T cd04949          97 DTKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSD---------------N----NDPVHSLINNFYEYV----F-  152 (372)
T ss_pred             CCCCCEEEECCccccchhHHhccCCceEEEEEChHHhCC---------------c----ccccccccchhhHHH----H-
Confidence            478998887654443333444455667788888532100               0    000011111111111    1 


Q ss_pred             HHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHH
Q psy15555        237 HVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQ  316 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~  316 (488)
                      ..++++|.+++.|+..++.+.+.++...++.++||+++...+.+.. ....++..++++|++.++|+++.+++|+.++.+
T Consensus       153 ~~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~-~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~  231 (372)
T cd04949         153 ENLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQ-FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVK  231 (372)
T ss_pred             hChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccc-hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHH
Confidence            2357789999999999999999887665689999999877665432 122456789999999999999999999999998


Q ss_pred             hhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHH
Q psy15555        317 IISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVEC  396 (488)
Q Consensus       317 ~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa  396 (488)
                      +.     |+++|+|+|.++..      ..+++.+++.++.++|.+.|..  +++.++|+.||+++.||..|++|++++||
T Consensus       232 ~~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~~~~~lEA  298 (372)
T cd04949         232 QV-----PDATLDIYGYGDEE------EKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGFGLSLMEA  298 (372)
T ss_pred             hC-----CCcEEEEEEeCchH------HHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEecccccccChHHHHH
Confidence            87     89999999998643      6677788888999999999976  78999999999999999999999999999


Q ss_pred             HHcCCcEEEeCCC-CCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy15555        397 MAAGLIMIAHKSG-GPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGF  473 (488)
Q Consensus       397 ~a~G~PvI~~~~~-~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  473 (488)
                      |++|+|||+++.+ |+. +++.++    .+|++++  |+++++++|.++++ +++.++++++++++.+++|||+.++++|
T Consensus       299 ma~G~PvI~~~~~~g~~-~~v~~~----~~G~lv~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~s~~~~~~~w  372 (372)
T cd04949         299 LSHGLPVISYDVNYGPS-EIIEDG----ENGYLVPKGDIEALAEAIIELLN-DPKLLQKFSEAAYENAERYSEENVWEKW  372 (372)
T ss_pred             HhCCCCEEEecCCCCcH-HHcccC----CCceEeCCCcHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence            9999999999986 665 899888    8999988  99999999999999 9999999999999999999999998864

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>PLN02501 digalactosyldiacylglycerol synthase

Probab=99.97  E-value=2.7e-28  Score=237.87  Aligned_cols=272  Identities=13%  Similarity=0.082  Sum_probs=197.0

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhh-----hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhh
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYP-----LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSF  223 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~-----~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      ..+.+.+..++|||||..++.+....     .++ ..+ |++..+|..+     ..|+...           .   ....
T Consensus       424 gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~Ar-Kl~-PVVasyHTny-----~eYl~~y-----------~---~g~L  482 (794)
T PLN02501        424 GDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTD-KFN-HVVGVVHTNY-----LEYIKRE-----------K---NGAL  482 (794)
T ss_pred             HHHHHHhhccCCCEEEECCchhhccHHHHHHHHH-HcC-CeEEEEeCCc-----HHHHhHh-----------c---chhH
Confidence            45678889999999986653333222     222 345 7888888654     2222221           0   1222


Q ss_pred             hHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC-----C--CCCCeEEEEee
Q psy15555        224 KLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS-----K--TDGPVKIISVA  296 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~-----~--~~~~~~i~~~g  296 (488)
                      .....+....+.....  ||.+++.|+.+++ +    +  .+.....+|+|.+.|.+....     .  ......++|+|
T Consensus       483 ~~~llk~l~~~v~r~h--cD~VIaPS~atq~-L----~--~~vI~nVnGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVG  553 (794)
T PLN02501        483 QAFFVKHINNWVTRAY--CHKVLRLSAATQD-L----P--KSVICNVHGVNPKFLKIGEKVAEERELGQQAFSKGAYFLG  553 (794)
T ss_pred             HHHHHHHHHHHHHHhh--CCEEEcCCHHHHH-h----c--ccceeecccccccccCCcchhHHHHhcCCccccCceEEEE
Confidence            2222222222222222  8999999977773 2    1  122233369999888764321     1  11224589999


Q ss_pred             ccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHh
Q psy15555        297 QFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSE  376 (488)
Q Consensus       297 ~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~  376 (488)
                      |+.++||++.+++|++.+.++.     ++++|+|+|+||..      +++++.++++++  +|.|+|..  ++...+|+.
T Consensus       554 RLa~EKGld~LLeAla~L~~~~-----pnvrLvIVGDGP~r------eeLe~la~eLgL--~V~FLG~~--dd~~~lyas  618 (794)
T PLN02501        554 KMVWAKGYRELIDLLAKHKNEL-----DGFNLDVFGNGEDA------HEVQRAAKRLDL--NLNFLKGR--DHADDSLHG  618 (794)
T ss_pred             cccccCCHHHHHHHHHHHHhhC-----CCeEEEEEcCCccH------HHHHHHHHHcCC--EEEecCCC--CCHHHHHHh
Confidence            9999999999999999998776     79999999999854      788888888887  48999987  667789999


Q ss_pred             CcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHH
Q psy15555        377 GLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQN  456 (488)
Q Consensus       377 ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~  456 (488)
                      +|+||+||..|++|++++||||||+|||+++.++.  +++.++    .+|+++.|.++++++|.+++. +++.+..+++ 
T Consensus       619 aDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~--e~V~~g----~nGll~~D~EafAeAI~~LLs-d~~~rl~~~a-  690 (794)
T PLN02501        619 YKVFINPSISDVLCTATAEALAMGKFVVCADHPSN--EFFRSF----PNCLTYKTSEDFVAKVKEALA-NEPQPLTPEQ-  690 (794)
T ss_pred             CCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC--ceEeec----CCeEecCCHHHHHHHHHHHHh-CchhhhHHHH-
Confidence            99999999999999999999999999999999885  456666    788888899999999999998 7665433332 


Q ss_pred             HHHHHhhcCHHHHHHHHHHHH
Q psy15555        457 AVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       457 a~~~~~~~s~~~~~~~~~~~~  477 (488)
                          ...+||+.+++++++.-
T Consensus       691 ----~~~~SWeAaadrLle~~  707 (794)
T PLN02501        691 ----RYNLSWEAATQRFMEYS  707 (794)
T ss_pred             ----HhhCCHHHHHHHHHHhh
Confidence                25899999999998764

>PHA01630 putative group 1 glycosyl transferase

Probab=99.97  E-value=2e-28  Score=230.64  Aligned_cols=218  Identities=15%  Similarity=0.197  Sum_probs=173.1

Q ss_pred             HHHH-hcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHH
Q psy15555        235 YSHV-GKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMY  312 (488)
Q Consensus       235 ~~~~-~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~  312 (488)
                      ..+. .+++|.++++|+.+++.+.+.+.. ++++.++|||+|.+.+.+.... ..++.+++++|++.++||++.+++|++
T Consensus        87 ~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~-~~~~~vl~~~g~~~~~Kg~d~Li~A~~  165 (331)
T PHA01630         87 LYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE-KPHPCVLAILPHSWDRKGGDIVVKIFH  165 (331)
T ss_pred             HHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc-cCCCEEEEEeccccccCCHHHHHHHHH
Confidence            3345 578999999999999999886432 4589999999998877654322 234567778888989999999999999


Q ss_pred             HhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCcc
Q psy15555        313 QLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIG  392 (488)
Q Consensus       313 ~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~  392 (488)
                      .+.++.     ++++++++|.++..      ..+      .++..   +.+.++.+++..+|+.||++++||..|+||++
T Consensus       166 ~l~~~~-----~~~~llivG~~~~~------~~l------~~~~~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~  225 (331)
T PHA01630        166 ELQNEG-----YDFYFLIKSSNMLD------PRL------FGLNG---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIP  225 (331)
T ss_pred             HHHhhC-----CCEEEEEEeCcccc------hhh------ccccc---eeccCCHHHHHHHHHhCCEEEECCccccCChH
Confidence            998876     79999999976422      111      12211   35668889999999999999999999999999


Q ss_pred             HHHHHHcCCcEEEeCCCCCccceeccCCCcccc--------------------ceecC-CHHHHHHHHHHHHccC---HH
Q psy15555        393 IVECMAAGLIMIAHKSGGPKMDIVIEDPETCRN--------------------GFLAC-DEVEYAQTIKLILHLS---QD  448 (488)
Q Consensus       393 ~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~--------------------g~~~~-~~~~l~~~i~~ll~~~---~~  448 (488)
                      ++||||||+|||+++.+|.. |++.++    .+                    |++++ |.+++++++.+++. +   ++
T Consensus       226 ~lEAMA~G~PVIas~~gg~~-E~i~~~----~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~-~~~~~~  299 (331)
T PHA01630        226 VIEALALGLDVVVTEKGAWS-EWVLSN----LDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALA-NWTPEK  299 (331)
T ss_pred             HHHHHHcCCCEEEeCCCCch-hhccCC----CceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHh-CCCHHH
Confidence            99999999999999999886 888776    44                    55555 78899999999998 5   34


Q ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        449 TKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       449 ~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      .++.++.+++...++|||+.+++++.++|++
T Consensus       300 ~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~  330 (331)
T PHA01630        300 KKENLEGRAILYRENYSYNAIAKMWEKILEK  330 (331)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence            4555555555555999999999999999975

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.96  E-value=2.5e-26  Score=222.17  Aligned_cols=338  Identities=12%  Similarity=0.087  Sum_probs=228.1

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||.++..   ..||.++.+..++++|.+++  +++.+++...+....    ..+.       .. +++..++.......
T Consensus         2 ~~i~i~~~---g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~~~~----~~~~-------~g-~~~~~~~~~~~~~~   64 (357)
T PRK00726          2 KKILLAGG---GTGGHVFPALALAEELKKRG--WEVLYLGTARGMEAR----LVPK-------AG-IEFHFIPSGGLRRK   64 (357)
T ss_pred             cEEEEEcC---cchHhhhHHHHHHHHHHhCC--CEEEEEECCCchhhh----cccc-------CC-CcEEEEeccCcCCC
Confidence            78888643   23578899999999999984  555555554221110    1000       12 44555544332222


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ....++......+.......+.+++.+||+||++...++... .+....++|++.+.|...                   
T Consensus        65 ~~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------  125 (357)
T PRK00726         65 GSLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV-------------------  125 (357)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC-------------------
Confidence            323344444444566667778889999999998875444333 223456788886544211                   


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----CCCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----SKTD  287 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----~~~~  287 (488)
                              ..           ...++..+.+|.++++++...   .+  ....++.+++|+++.+.+.+...    ....
T Consensus       126 --------~~-----------~~~r~~~~~~d~ii~~~~~~~---~~--~~~~~i~vi~n~v~~~~~~~~~~~~~~~~~~  181 (357)
T PRK00726        126 --------PG-----------LANKLLARFAKKVATAFPGAF---PE--FFKPKAVVTGNPVREEILALAAPPARLAGRE  181 (357)
T ss_pred             --------cc-----------HHHHHHHHHhchheECchhhh---hc--cCCCCEEEECCCCChHhhcccchhhhccCCC
Confidence                    00           112234456799999987542   22  33468999999998765543221    1223


Q ss_pred             CCeEEEEeeccCCCCChHHHH-HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        288 GPVKIISVAQFRPEKDHPLQL-RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll-~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      +.++++++|+..+.++...++ +|++++.+.      + ..++++|+++.       +++.+..+ .++.  |.+.|++ 
T Consensus       182 ~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~------~-~~~~~~G~g~~-------~~~~~~~~-~~~~--v~~~g~~-  243 (357)
T PRK00726        182 GKPTLLVVGGSQGARVLNEAVPEALALLPEA------L-QVIHQTGKGDL-------EEVRAAYA-AGIN--AEVVPFI-  243 (357)
T ss_pred             CCeEEEEECCcHhHHHHHHHHHHHHHHhhhC------c-EEEEEcCCCcH-------HHHHHHhh-cCCc--EEEeehH-
Confidence            567788888887777765555 888887532      3 45778898852       44554455 6653  9999998 


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc-------cceeccCCCccccceecC--C--HHHH
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK-------MDIVIEDPETCRNGFLAC--D--EVEY  435 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~-------~eiv~~~~~~~~~g~~~~--~--~~~l  435 (488)
                       +++..+|+.||+++..|    ++.+++|||++|+|+|+++.++..       .+.+.+.    ++|++++  |  ++++
T Consensus       244 -~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~----~~g~~~~~~~~~~~~l  314 (357)
T PRK00726        244 -DDMAAAYAAADLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA----GAALLIPQSDLTPEKL  314 (357)
T ss_pred             -hhHHHHHHhCCEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC----CCEEEEEcccCCHHHH
Confidence             89999999999999865    368899999999999998764311       1345555    6888875  5  8999


Q ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        436 AQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       436 ~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +++|.++++ |++.+++|++++++..+.++.+.+++.+.++++
T Consensus       315 ~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (357)
T PRK00726        315 AEKLLELLS-DPERLEAMAEAARALGKPDAAERLADLIEELAR  356 (357)
T ss_pred             HHHHHHHHc-CHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence            999999999 999999999999988899999999998888764

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.95  E-value=3.1e-25  Score=217.01  Aligned_cols=284  Identities=13%  Similarity=0.136  Sum_probs=206.3

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +..+..+|| +|..+......+|.. + .....++.+++|.|+...++...+..+                       ..
T Consensus       120 ~i~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r-----------------------~~  176 (456)
T TIGR02400       120 ALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWR-----------------------RE  176 (456)
T ss_pred             HHHHhCCCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcH-----------------------HH
Confidence            344455665 666665445555533 2 234568889999998766654322211                       01


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhc----------------cCCceEEEcCCCCchhhhccCCC---------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN----------------CQLKTYKLYPPCDTEDLKKITHS---------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~----------------~~~k~~vi~~~~d~~~~~~~~~~---------  284 (488)
                      ++     ..+-.+|.|-+++...++.|.+...                ...++.++|||+|++.|.+....         
T Consensus       177 il-----~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~  251 (456)
T TIGR02400       177 LL-----EGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE  251 (456)
T ss_pred             HH-----HHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHH
Confidence            11     2335689999999999999877332                22378899999999988654211         


Q ss_pred             ---CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc----eEEEEEecCCCCCcHHHHHHHHHHHHhc----
Q psy15555        285 ---KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN----LKLIFIGSTRNEEDEVCVKDMQDLCKHL----  353 (488)
Q Consensus       285 ---~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~----~~l~ivG~~~~~~~~~~~~~l~~~~~~~----  353 (488)
                         ...++++++++||+++.||++.+++|++++.+++     |+    +.|+++|.....+.+++ +++++.++++    
T Consensus       252 lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~-----p~~~~~v~Lv~v~~p~rg~~~~~-~~l~~~i~~lv~~i  325 (456)
T TIGR02400       252 LRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEH-----PEWRGKVVLVQIAVPSRGDVPEY-QQLRRQVEELVGRI  325 (456)
T ss_pred             HHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhC-----ccccCceEEEEEecCCccCchHH-HHHHHHHHHHHHHH
Confidence               1135789999999999999999999999998877     54    56777753211111122 4444444433    


Q ss_pred             ----C---CCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCc----EEEeCCCCCccceeccCCCc
Q psy15555        354 ----S---LENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI----MIAHKSGGPKMDIVIEDPET  422 (488)
Q Consensus       354 ----~---l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~P----vI~~~~~~~~~eiv~~~~~~  422 (488)
                          +   ..+.+.+.+.++.+|+.++|+.||+++.||..|++|++++||||||+|    +|+|+.+|.. +.+.     
T Consensus       326 n~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~-~~l~-----  399 (456)
T TIGR02400       326 NGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA-QELN-----  399 (456)
T ss_pred             HhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh-HHhC-----
Confidence                1   112234456789999999999999999999999999999999999999    9999998886 4442     


Q ss_pred             cccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        423 CRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       423 ~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                        +|++++  |+++++++|.++++++++++++..+++++.+.+||+..+++++++.+.
T Consensus       400 --~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~  455 (456)
T TIGR02400       400 --GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN  455 (456)
T ss_pred             --CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence              377775  999999999999997889999999999999988999999999887553

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.95  E-value=1.2e-25  Score=222.00  Aligned_cols=282  Identities=15%  Similarity=0.165  Sum_probs=204.1

Q ss_pred             hhhcC-CcEEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHH
Q psy15555        155 LLSFQ-PDIYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVF  231 (488)
Q Consensus       155 l~~~~-pDiii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (488)
                      ....+ .|+|+.+......+|.. + .....++++++|.|+...+.......                   .        
T Consensus       126 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~-------------------~--------  178 (460)
T cd03788         126 AEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPW-------------------R--------  178 (460)
T ss_pred             HHhcCCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCC-------------------h--------
Confidence            33334 46777666555555533 2 12357899999999865543221110                   0        


Q ss_pred             HHHHHHHhcccCEEEEcChhHHHHHHHHh-----------------ccCCceEEEcCCCCchhhhccCCC----------
Q psy15555        232 ALLYSHVGKYSDIIMVNSSWTEEHVIQLW-----------------NCQLKTYKLYPPCDTEDLKKITHS----------  284 (488)
Q Consensus       232 ~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-----------------~~~~k~~vi~~~~d~~~~~~~~~~----------  284 (488)
                      ..+.+ .+-.+|.+.+++....+.+.+..                 +...++.++|||+|.+.+.+....          
T Consensus       179 ~~ll~-~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~  257 (460)
T cd03788         179 EELLR-GLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAEL  257 (460)
T ss_pred             HHHHH-HHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHH
Confidence            01112 22348999999987777666532                 222368899999999888654211          


Q ss_pred             --CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc----eEEEEEecCCCCC---cHHHHHHHHHHHHhcCC
Q psy15555        285 --KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN----LKLIFIGSTRNEE---DEVCVKDMQDLCKHLSL  355 (488)
Q Consensus       285 --~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~----~~l~ivG~~~~~~---~~~~~~~l~~~~~~~~l  355 (488)
                        ...++++++++||+.+.||++.+++|++.+.++.     |+    ++|+++|.+...+   ..++.+++++++.+.+.
T Consensus       258 ~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~-----p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~  332 (460)
T cd03788         258 RERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERY-----PEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRING  332 (460)
T ss_pred             HHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhC-----hhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHh
Confidence              1246789999999999999999999999998876     54    6788887543211   12344555555544321


Q ss_pred             C------CcEE-EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCc----EEEeCCCCCccceeccCCCccc
Q psy15555        356 E------NNVE-FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI----MIAHKSGGPKMDIVIEDPETCR  424 (488)
Q Consensus       356 ~------~~v~-~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~P----vI~~~~~~~~~eiv~~~~~~~~  424 (488)
                      .      ..|+ +.|.++.+|+..+|+.||+++.||..|++|++++|||+||+|    ||+++.+|.. +.   +    .
T Consensus       333 ~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~-~~---~----~  404 (460)
T cd03788         333 KFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA-EE---L----S  404 (460)
T ss_pred             ccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch-hh---c----C
Confidence            1      2344 457889999999999999999999999999999999999999    9999888776 44   3    4


Q ss_pred             cceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        425 NGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       425 ~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      +|++++  |+++++++|.+++++++++++++++++++.+++||++.+++++++-+
T Consensus       405 ~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l  459 (460)
T cd03788         405 GALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL  459 (460)
T ss_pred             CCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence            688876  99999999999998667889999999999999999999999987643

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>KOG0853|consensus

Probab=99.95  E-value=1.6e-25  Score=212.17  Aligned_cols=296  Identities=22%  Similarity=0.290  Sum_probs=230.8

Q ss_pred             cCCcEEEecCCccchhhhhhhhCC----CeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHH
Q psy15555        158 FQPDIYIDTMGYAFTYPLFSYIGG----SKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL  233 (488)
Q Consensus       158 ~~pDiii~~~~~~~~~~~~~~~~~----~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (488)
                      ++.|+++.... ....++.+...+    .++..++|.|...                     -....+..+..+...+.+
T Consensus       144 ~~~d~~i~d~~-~~~~~l~~~~~~p~~~~~i~~~~h~~~~l---------------------la~r~g~~~~l~~~~l~~  201 (495)
T KOG0853|consen  144 EKVDPIIEDFV-SACVPLLKQLSGPDVIIKIYFYCHFPDSL---------------------LAKRLGVLKVLYRHALDK  201 (495)
T ss_pred             hhhceeecchH-HHHHHHHHHhcCCcccceeEEeccchHHH---------------------hccccCccceeehhhhhh
Confidence            45776664432 344456665663    6778899977521                     111234555667777888


Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccC--CceEEEcCCCCchhhhccC--------C------CCCCCCeEEEEeec
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ--LKTYKLYPPCDTEDLKKIT--------H------SKTDGPVKIISVAQ  297 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~--~k~~vi~~~~d~~~~~~~~--------~------~~~~~~~~i~~~g~  297 (488)
                      ++......+|.+++.|...+.++.+....-  .++.++++.+|.+.+.+..        .      .....+..+.-+.+
T Consensus       202 ~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~  281 (495)
T KOG0853|consen  202 IEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINR  281 (495)
T ss_pred             hhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeeeecccceEeeeeee
Confidence            888888999999999999999998876532  2588899999877655311        0      12233567788899


Q ss_pred             cCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecC----CCCCcHHHHHHHHHHHHhcCC-CCcEEEecCCChHHHHH
Q psy15555        298 FRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGST----RNEEDEVCVKDMQDLCKHLSL-ENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       298 ~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~----~~~~~~~~~~~l~~~~~~~~l-~~~v~~~g~~~~~el~~  372 (488)
                      +.+.|+...+++++..+....++...++.++.++|+.    ...++.++.+++.++++++++ .+.|.|+...++.+...
T Consensus       282 ~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yr  361 (495)
T KOG0853|consen  282 FEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYR  361 (495)
T ss_pred             cCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHHH
Confidence            9999999999999999988875444457888888832    244567888999999999998 46777878887777777


Q ss_pred             HHHhCcE-EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHH---HHHHHHHHHHccCH
Q psy15555        373 EFSEGLI-GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEV---EYAQTIKLILHLSQ  447 (488)
Q Consensus       373 ~~~~ad~-~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~---~l~~~i~~ll~~~~  447 (488)
                      +++.+.+ +..|.. |+||++++|||+||+|||+++.||+. |++.++    .+|++++ +.+   .+++++.++.. |+
T Consensus       362 l~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~-EiV~~~----~tG~l~dp~~e~~~~~a~~~~kl~~-~p  434 (495)
T KOG0853|consen  362 LAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPA-EIVVHG----VTGLLIDPGQEAVAELADALLKLRR-DP  434 (495)
T ss_pred             HHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCce-EEEEcC----CcceeeCCchHHHHHHHHHHHHHhc-CH
Confidence            7777774 445555 99999999999999999999999997 999999    9999988 666   59999999999 99


Q ss_pred             HHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhh
Q psy15555        448 DTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       448 ~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +.+.+|++++++.+ +.|||+.+.+++.+++.+.+.
T Consensus       435 ~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~  470 (495)
T KOG0853|consen  435 ELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQ  470 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCC
Confidence            99999999999999 779999999999998886654

>PHA01633 putative glycosyl transferase group 1

Probab=99.95  E-value=1.1e-25  Score=209.19  Aligned_cols=212  Identities=15%  Similarity=0.183  Sum_probs=164.3

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC-------C---CCCCCeEEEEeeccCCCCChHHHHH
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH-------S---KTDGPVKIISVAQFRPEKDHPLQLR  309 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~-------~---~~~~~~~i~~~g~~~~~k~~~~ll~  309 (488)
                      .+.+.++++|+.+++.+.+. +.+..+ ++++|+|.+.|.+...       .   ...+.++++++||+.++||++.+++
T Consensus        91 ~~~~~vIavS~~t~~~L~~~-G~~~~i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~  168 (335)
T PHA01633         91 LQDVKFIPNSKFSAENLQEV-GLQVDL-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQ  168 (335)
T ss_pred             hcCCEEEeCCHHHHHHHHHh-CCCCce-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHH
Confidence            34578999999999999985 433333 5778999887765321       0   1135678999999999999999999


Q ss_pred             HHHHhHHhhhhhccCc----eEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe---cCCChHHHHHHHHhCcEEEE
Q psy15555        310 AMYQLRQIISEELWDN----LKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK---VNLPYEDMKKEFSEGLIGLH  382 (488)
Q Consensus       310 a~~~l~~~~~~~~~~~----~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~---g~~~~~el~~~~~~ad~~v~  382 (488)
                      |++++.++.     |+    ++++++|.          ..    .++++++++|.|.   |.++.+++.++|+.||++++
T Consensus       169 A~~~L~~~~-----p~~~~~i~l~ivG~----------~~----~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~  229 (335)
T PHA01633        169 VFNELNTKY-----PDIAKKIHFFVISH----------KQ----FTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIV  229 (335)
T ss_pred             HHHHHHHhC-----CCccccEEEEEEcH----------HH----HHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEE
Confidence            999998776     43    57777773          11    2445677899998   56678999999999999999


Q ss_pred             cCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccC--------C------CccccceecC--CHHHHHHHHHHHHccC
Q psy15555        383 AMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIED--------P------ETCRNGFLAC--DEVEYAQTIKLILHLS  446 (488)
Q Consensus       383 ~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~--------~------~~~~~g~~~~--~~~~l~~~i~~ll~~~  446 (488)
                      ||..|+||++++|||+||+|||+++.++.. |++.++        +      ...+.|+.++  |+++++++|.+++. .
T Consensus       230 PS~~EgfGlvlLEAMA~G~PVVas~~~~l~-Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~-~  307 (335)
T PHA01633        230 PSGTEGFGMPVLESMAMGTPVIHQLMPPLD-EFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE-L  307 (335)
T ss_pred             CCccccCCHHHHHHHHcCCCEEEccCCCce-eecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh-c
Confidence            999999999999999999999999998876 654320        0      0124577765  99999999999966 3


Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q psy15555        447 QDTKTRISQNAVSSVDRFSMEEFKNGFLT  475 (488)
Q Consensus       447 ~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  475 (488)
                      . .+...+.++++.+++|+|+.+.++|++
T Consensus       308 ~-~~~~~~~~~~~~a~~f~~~~~~~~~~~  335 (335)
T PHA01633        308 Q-DREERSMKLKELAKKYDIRNLYTRFLE  335 (335)
T ss_pred             c-ChhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence            2 233447778888899999999999863

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.94  E-value=1.3e-24  Score=210.05  Aligned_cols=324  Identities=12%  Similarity=0.084  Sum_probs=212.2

Q ss_pred             CCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHH
Q psy15555         63 NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLG  142 (488)
Q Consensus        63 ~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      +..||.++.+..++++|.++|  ++|.+++....... ...+.          .+ +++..++.........+..+....
T Consensus         7 ~~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~~~-~~~~~----------~~-~~~~~~~~~~~~~~~~~~~~~~~~   72 (350)
T cd03785           7 GGTGGHIFPALALAEELRERG--AEVLFLGTKRGLEA-RLVPK----------AG-IPLHTIPVGGLRRKGSLKKLKAPF   72 (350)
T ss_pred             cCchhhhhHHHHHHHHHHhCC--CEEEEEECCCcchh-hcccc----------cC-CceEEEEecCcCCCChHHHHHHHH
Confidence            345678899999999999995  55555555422111 00000          11 444444433222222233332222


Q ss_pred             HHHHHHHHHHHHhhhcCCcEEEecCCccchh-hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccch
Q psy15555        143 QSIGSMILGVEALLSFQPDIYIDTMGYAFTY-PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILT  221 (488)
Q Consensus       143 ~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~-~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      ..+.......+.+++.+||+||.+...+... ..+.+..++|++.+.|...                           ..
T Consensus        73 ~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~---------------------------~~  125 (350)
T cd03785          73 KLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAV---------------------------PG  125 (350)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCC---------------------------cc
Confidence            3344445566778899999999776444322 2333456788876443211                           00


Q ss_pred             hhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC----CCCCCCCeEEEEeec
Q psy15555        222 SFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT----HSKTDGPVKIISVAQ  297 (488)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~----~~~~~~~~~i~~~g~  297 (488)
                                 ...+.+.+.+|.++++|+.+++.    . .+.++.+++|++|.+.+.+..    ...+++++++++.|+
T Consensus       126 -----------~~~~~~~~~~~~vi~~s~~~~~~----~-~~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g  189 (350)
T cd03785         126 -----------LANRLLARFADRVALSFPETAKY----F-PKDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGG  189 (350)
T ss_pred             -----------HHHHHHHHhhCEEEEcchhhhhc----C-CCCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECC
Confidence                       01223445689999999988776    2 245899999999877654321    112345667777776


Q ss_pred             cCCCCChHH-HHHHHHHhHHhhhhhccCceE-EEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH
Q psy15555        298 FRPEKDHPL-QLRAMYQLRQIISEELWDNLK-LIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS  375 (488)
Q Consensus       298 ~~~~k~~~~-ll~a~~~l~~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~  375 (488)
                      ....|+... ++++++.+.+       ++.. ++++|.+.      . +++++.++++  .++|.+.|++  +++..+|+
T Consensus       190 ~~~~~~~~~~l~~a~~~l~~-------~~~~~~~i~G~g~------~-~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~  251 (350)
T cd03785         190 SQGARAINEAVPEALAELLR-------KRLQVIHQTGKGD------L-EEVKKAYEEL--GVNYEVFPFI--DDMAAAYA  251 (350)
T ss_pred             cHhHHHHHHHHHHHHHHhhc-------cCeEEEEEcCCcc------H-HHHHHHHhcc--CCCeEEeehh--hhHHHHHH
Confidence            666666654 4588887763       3555 44677662      1 5667777665  4689999998  89999999


Q ss_pred             hCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC--------CccceeccCCCccccceecC----CHHHHHHHHHHHH
Q psy15555        376 EGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG--------PKMDIVIEDPETCRNGFLAC----DEVEYAQTIKLIL  443 (488)
Q Consensus       376 ~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~--------~~~eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll  443 (488)
                      .||+++.+|    ++.+++|||++|+|||+++.++        +. +.+.+.    ++|++++    |+++++++|.+++
T Consensus       252 ~ad~~v~~s----g~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~-~~l~~~----g~g~~v~~~~~~~~~l~~~i~~ll  322 (350)
T cd03785         252 AADLVISRA----GASTVAELAALGLPAILIPLPYAADDHQTANA-RALVKA----GAAVLIPQEELTPERLAAALLELL  322 (350)
T ss_pred             hcCEEEECC----CHhHHHHHHHhCCCEEEeecCCCCCCcHHHhH-HHHHhC----CCEEEEecCCCCHHHHHHHHHHHh
Confidence            999999755    2688999999999999987643        12 445555    6888876    7999999999999


Q ss_pred             ccCHHHHHHHHHHHHHHHhhcCHHHHHH
Q psy15555        444 HLSQDTKTRISQNAVSSVDRFSMEEFKN  471 (488)
Q Consensus       444 ~~~~~~~~~~~~~a~~~~~~~s~~~~~~  471 (488)
                      + +++.+++|++++++.++.+..+++++
T Consensus       323 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~  349 (350)
T cd03785         323 S-DPERLKAMAEAARSLARPDAAERIAD  349 (350)
T ss_pred             c-CHHHHHHHHHHHHhcCCCCHHHHHHh
Confidence            8 99999999999998877777776653

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.94  E-value=9.8e-25  Score=212.78  Aligned_cols=264  Identities=13%  Similarity=0.066  Sum_probs=186.0

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhhhhhhhC--CCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYPLFSYIG--GSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~--~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+++++.+||+||.+.+... ++.++...  ++|++...+....                                 
T Consensus        94 ~~l~~~l~~~~pD~Vi~~~~~~~-~~~~~~~~~~~ip~~~~~td~~~---------------------------------  139 (380)
T PRK13609         94 KRLKLLLQAEKPDIVINTFPIIA-VPELKKQTGISIPTYNVLTDFCL---------------------------------  139 (380)
T ss_pred             HHHHHHHHHhCcCEEEEcChHHH-HHHHHHhcCCCCCeEEEeCCCCC---------------------------------
Confidence            55778899999999998765443 34443233  4666543321100                                 


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC-------CCCC-CCCeEEEEeecc
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-------HSKT-DGPVKIISVAQF  298 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~-------~~~~-~~~~~i~~~g~~  298 (488)
                             ...++.+++|.+++.|+.+++.+.+.+..++++.+++++++........       -... +++.++++.|+.
T Consensus       140 -------~~~~~~~~ad~i~~~s~~~~~~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~  212 (380)
T PRK13609        140 -------HKIWVHREVDRYFVATDHVKKVLVDIGVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAH  212 (380)
T ss_pred             -------CcccccCCCCEEEECCHHHHHHHHHcCCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCC
Confidence                   0112456799999999999999998654455888888877532211111       0112 234466677888


Q ss_pred             CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCc
Q psy15555        299 RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGL  378 (488)
Q Consensus       299 ~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad  378 (488)
                      ...|++..+++++.+.         ++++++++|+..    ....+++++.+++.+  ++|+++|++  +++.++|+.||
T Consensus       213 ~~~k~~~~li~~l~~~---------~~~~~viv~G~~----~~~~~~l~~~~~~~~--~~v~~~g~~--~~~~~l~~~aD  275 (380)
T PRK13609        213 GVLGNVKELCQSLMSV---------PDLQVVVVCGKN----EALKQSLEDLQETNP--DALKVFGYV--ENIDELFRVTS  275 (380)
T ss_pred             CCCcCHHHHHHHHhhC---------CCcEEEEEeCCC----HHHHHHHHHHHhcCC--CcEEEEech--hhHHHHHHhcc
Confidence            8889998888876532         578888775421    133467777776654  689999998  78999999999


Q ss_pred             EEEEcCCCCcCCccHHHHHHcCCcEEEeC-CCCCcc---ceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        379 IGLHAMWNEHFGIGIVECMAAGLIMIAHK-SGGPKM---DIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       379 ~~v~~s~~e~~g~~~lEa~a~G~PvI~~~-~~~~~~---eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      +++.    +++|++++|||++|+|||+++ .+|...   +.+.+.    +.++...|+++++++|.++++ |++.+++|+
T Consensus       276 ~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~----G~~~~~~~~~~l~~~i~~ll~-~~~~~~~m~  346 (380)
T PRK13609        276 CMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK----GAAVVIRDDEEVFAKTEALLQ-DDMKLLQMK  346 (380)
T ss_pred             EEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC----CcEEEECCHHHHHHHHHHHHC-CHHHHHHHH
Confidence            8874    456899999999999999976 344211   233333    445556799999999999999 999999999


Q ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        455 QNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       455 ~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +++++..+.++++.+++.+.+.+..
T Consensus       347 ~~~~~~~~~~s~~~i~~~i~~~~~~  371 (380)
T PRK13609        347 EAMKSLYLPEPADHIVDDILAENHV  371 (380)
T ss_pred             HHHHHhCCCchHHHHHHHHHHhhhh
Confidence            9998877788999999999887754

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.94  E-value=2.3e-24  Score=208.09  Aligned_cols=329  Identities=12%  Similarity=0.119  Sum_probs=209.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||.|+..   ..||....+..++++|.+++  ++|.++++..+. .....+    .      .. +.+..++...+...
T Consensus         1 ~~i~~~~g---~~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~~-~~~~~~----~------~g-~~~~~i~~~~~~~~   63 (348)
T TIGR01133         1 KKVVLAAG---GTGGHIFPALAVAEELIKRG--VEVLWLGTKRGL-EKRLVP----K------AG-IEFYFIPVGGLRRK   63 (348)
T ss_pred             CeEEEEeC---ccHHHHhHHHHHHHHHHhCC--CEEEEEeCCCcc-hhcccc----c------CC-CceEEEeccCcCCC
Confidence            57877642   23355566679999999985  556555653221 111000    0      11 44444444332222


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhh-hhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPL-FSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~-~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      .....+......+.......+++++.+||+||.+...+..... +....++|++.+.+...                   
T Consensus        64 ~~~~~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------  124 (348)
T TIGR01133        64 GSFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV-------------------  124 (348)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC-------------------
Confidence            2223333333334455667788999999999988655443322 33356778764322100                   


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----CCCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----SKTD  287 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----~~~~  287 (488)
                              ..           ...+++.+.+|.++++|+.+++.+        +..+++||++...+.+...    ..++
T Consensus       125 --------~~-----------~~~~~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~  177 (348)
T TIGR01133       125 --------PG-----------LTNKLLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLRE  177 (348)
T ss_pred             --------cc-----------HHHHHHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCC
Confidence                    00           012334567899999999887665        2379999998655432211    1234


Q ss_pred             CCeEEEEeeccCCCCChHH-HHHHHHHhHHhhhhhccCceEEE-EEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDHPL-QLRAMYQLRQIISEELWDNLKLI-FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~-ll~a~~~l~~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +.++++++|+....|+... +++|++.+.+.       +.+++ ++|++      +. +++++.++++++.+.+.+.   
T Consensus       178 ~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~-------~~~~~~~~g~~------~~-~~l~~~~~~~~l~~~v~~~---  240 (348)
T TIGR01133       178 GKPTILVLGGSQGAKILNELVPKALAKLAEK-------GIQIVHQTGKN------DL-EKVKNVYQELGIEAIVTFI---  240 (348)
T ss_pred             CCeEEEEECCchhHHHHHHHHHHHHHHHhhc-------CcEEEEECCcc------hH-HHHHHHHhhCCceEEecCc---
Confidence            5678899988777777554 45788777542       34443 44443      22 6778878877764444444   


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc------cceeccCCCccccceecC--C--HHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK------MDIVIEDPETCRNGFLAC--D--EVEY  435 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~------~eiv~~~~~~~~~g~~~~--~--~~~l  435 (488)
                      . .++..+|+.||++|.+|    +|.+++|||++|+|+|+++.++..      .+++.+.    ++|++++  |  ++++
T Consensus       241 ~-~~~~~~l~~ad~~v~~~----g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~----~~G~~~~~~~~~~~~l  311 (348)
T TIGR01133       241 D-ENMAAAYAAADLVISRA----GASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL----GAGLVIRQKELLPEKL  311 (348)
T ss_pred             c-cCHHHHHHhCCEEEECC----ChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC----CCEEEEecccCCHHHH
Confidence            2 38999999999999754    368899999999999998874321      1466666    7898875  4  9999


Q ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHH
Q psy15555        436 AQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKN  471 (488)
Q Consensus       436 ~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~  471 (488)
                      ++++.++++ |++.+++|++++++.++....+++++
T Consensus       312 ~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~  346 (348)
T TIGR01133       312 LEALLKLLL-DPANLEAMAEAARKLAKPDAAKRIAE  346 (348)
T ss_pred             HHHHHHHHc-CHHHHHHHHHHHHhcCCccHHHHHHh
Confidence            999999998 99999999999987776666666554

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.93  E-value=5.9e-24  Score=206.92  Aligned_cols=267  Identities=14%  Similarity=0.090  Sum_probs=187.2

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhhhhhhh--CCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYPLFSYI--GGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~--~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ....+.+++.+||+|+++.+.+.. ..++..  .++|++....+..                       .   .      
T Consensus        94 ~~l~~~l~~~kPDvVi~~~p~~~~-~~l~~~~~~~iP~~~v~td~~-----------------------~---~------  140 (391)
T PRK13608         94 NKLINLLIKEKPDLILLTFPTPVM-SVLTEQFNINIPVATVMTDYR-----------------------L---H------  140 (391)
T ss_pred             HHHHHHHHHhCcCEEEECCcHHHH-HHHHHhcCCCCCEEEEeCCCC-----------------------c---c------
Confidence            567788999999999988654432 333222  3567654322100                       0   0      


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC-------CCCC-CCCeEEEEeecc
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-------HSKT-DGPVKIISVAQF  298 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~-------~~~~-~~~~~i~~~g~~  298 (488)
                              ..++.+.+|.+++.|+.+++.+.+.+..++++.++++|++........       -... ++..+++++|++
T Consensus       141 --------~~w~~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~l  212 (391)
T PRK13608        141 --------KNWITPYSTRYYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAF  212 (391)
T ss_pred             --------cccccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCc
Confidence                    012346789999999999999988654456888988888743221111       0112 234556778999


Q ss_pred             CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCc
Q psy15555        299 RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGL  378 (488)
Q Consensus       299 ~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad  378 (488)
                      ...|+++.+++++.   +..     +++++++++++.    .+..+++++.   .+..++|.+.|++  +++.++|+.||
T Consensus       213 g~~k~~~~li~~~~---~~~-----~~~~~vvv~G~~----~~l~~~l~~~---~~~~~~v~~~G~~--~~~~~~~~~aD  275 (391)
T PRK13608        213 GVSKGFDTMITDIL---AKS-----ANAQVVMICGKS----KELKRSLTAK---FKSNENVLILGYT--KHMNEWMASSQ  275 (391)
T ss_pred             ccchhHHHHHHHHH---hcC-----CCceEEEEcCCC----HHHHHHHHHH---hccCCCeEEEecc--chHHHHHHhhh
Confidence            88899999998753   233     578886664322    1222334433   3334679999998  78999999999


Q ss_pred             EEEEcCCCCcCCccHHHHHHcCCcEEEeCC-CCCc---cceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        379 IGLHAMWNEHFGIGIVECMAAGLIMIAHKS-GGPK---MDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       379 ~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-~~~~---~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      ++|.    .++|.++.|||++|+|+|+++. ++..   ..++.+.    +.|+.++|++++++++.++++ |++.+++|+
T Consensus       276 l~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~----G~g~~~~~~~~l~~~i~~ll~-~~~~~~~m~  346 (391)
T PRK13608        276 LMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK----GFGKIADTPEEAIKIVASLTN-GNEQLTNMI  346 (391)
T ss_pred             EEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC----CcEEEeCCHHHHHHHHHHHhc-CHHHHHHHH
Confidence            9986    3568899999999999999864 3311   0233344    677778899999999999999 999999999


Q ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        455 QNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       455 ~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +++++..+.++++.+++.+.+.++++.+
T Consensus       347 ~~~~~~~~~~s~~~i~~~l~~l~~~~~~  374 (391)
T PRK13608        347 STMEQDKIKYATQTICRDLLDLIGHSSQ  374 (391)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence            9999988889999999999999877554

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.93  E-value=6.6e-24  Score=206.37  Aligned_cols=264  Identities=11%  Similarity=0.032  Sum_probs=188.3

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhh--hhhhh-----CCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccch
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYP--LFSYI-----GGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILT  221 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~-----~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      ....+.+++.+||+||++++++...+  .+...     .++|++..+....                            .
T Consensus        90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~----------------------------~  141 (382)
T PLN02605         90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLG----------------------------T  141 (382)
T ss_pred             HHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCC----------------------------C
Confidence            44667888899999999877754433  22212     3566665443210                            0


Q ss_pred             hhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC--------CCCCCCeEEE
Q psy15555        222 SFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH--------SKTDGPVKII  293 (488)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~--------~~~~~~~~i~  293 (488)
                      .           ...++.+.+|.+++.|+..++.+.+.+..++++.+++++++.+...+...        ..++++++++
T Consensus       142 ~-----------~~~w~~~~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il  210 (382)
T PLN02605        142 C-----------HPTWFHKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVL  210 (382)
T ss_pred             c-----------CcccccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEE
Confidence            0           01134578999999999999999987655568999999987654322110        1235678999


Q ss_pred             EeeccCCCCChHHHHHHHHHhHH----hhhhhccCceE-EEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChH
Q psy15555        294 SVAQFRPEKDHPLQLRAMYQLRQ----IISEELWDNLK-LIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE  368 (488)
Q Consensus       294 ~~g~~~~~k~~~~ll~a~~~l~~----~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~  368 (488)
                      ++|+..+.|+...+++++..+..    ..     ++.+ ++++|+++     +..+++++.    ....+|.++|++  +
T Consensus       211 ~~Gg~~g~~~~~~li~~l~~~~~~~~~~~-----~~~~~~vi~G~~~-----~~~~~L~~~----~~~~~v~~~G~~--~  274 (382)
T PLN02605        211 LMGGGEGMGPLEETARALGDSLYDKNLGK-----PIGQVVVICGRNK-----KLQSKLESR----DWKIPVKVRGFV--T  274 (382)
T ss_pred             EECCCcccccHHHHHHHHHHhhccccccC-----CCceEEEEECCCH-----HHHHHHHhh----cccCCeEEEecc--c
Confidence            99999999999999999876531    12     4555 56777652     222444433    223569999999  6


Q ss_pred             HHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC-----CCCccceeccCCCccccceecCCHHHHHHHHHHHH
Q psy15555        369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS-----GGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLIL  443 (488)
Q Consensus       369 el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-----~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll  443 (488)
                      ++.++|+.||++|..+    +|.+++|||+||+|+|+++.     .++. +.+.+.    +.|+.+.|++++++++.+++
T Consensus       275 ~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~----g~g~~~~~~~~la~~i~~ll  345 (382)
T PLN02605        275 NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDN----GFGAFSESPKEIARIVAEWF  345 (382)
T ss_pred             cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhC----CceeecCCHHHHHHHHHHHH
Confidence            8999999999999754    57899999999999999985     2333 334444    57877789999999999999


Q ss_pred             ccC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        444 HLS-QDTKTRISQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       444 ~~~-~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      . + ++.+++|++++++.....+.+.+++.+.+..
T Consensus       346 ~-~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~  379 (382)
T PLN02605        346 G-DKSDELEAMSENALKLARPEAVFDIVHDLHELV  379 (382)
T ss_pred             c-CCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence            8 6 9999999999998887778888877776554

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.92  E-value=8.3e-23  Score=212.08  Aligned_cols=289  Identities=12%  Similarity=0.145  Sum_probs=210.9

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++.+..+|| +|..+..+..++|.. + .....++.+++|.|+.+.++...+..+                       ..
T Consensus       140 ~i~~~~~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r-----------------------~~  196 (797)
T PLN03063        140 VVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSR-----------------------SE  196 (797)
T ss_pred             HHHHhcCCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCH-----------------------HH
Confidence            334555665 665555445555533 2 245778999999999776654422211                       01


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHh----------------ccCCceEEEcCCCCchhhhccCCC---------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLW----------------NCQLKTYKLYPPCDTEDLKKITHS---------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----------------~~~~k~~vi~~~~d~~~~~~~~~~---------  284 (488)
                      ++     ..+-.+|.|-+++...++.|.+..                +...++.++|+|+|.+.+.+....         
T Consensus       197 il-----~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~  271 (797)
T PLN03063        197 LL-----RAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKE  271 (797)
T ss_pred             HH-----HHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHH
Confidence            11     133467999999999988887621                112368899999999887643210         


Q ss_pred             ---CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCce----EEEEEecCCCCCcHHHHHHHHHHHHhcC--C
Q psy15555        285 ---KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNL----KLIFIGSTRNEEDEVCVKDMQDLCKHLS--L  355 (488)
Q Consensus       285 ---~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~----~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l  355 (488)
                         ...++++++++||+++.||+..+++|+.++.+++     |++    .|+.++ +|...+....+++++.++++.  +
T Consensus       272 lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~-----P~~~~kvvLvqia-~psr~~~~~y~~l~~~v~~l~g~I  345 (797)
T PLN03063        272 LKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEEN-----PEWRDKVMLVQIA-VPTRNDVPEYQKLKSQVHELVGRI  345 (797)
T ss_pred             HHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhC-----ccccCcEEEEEEe-cCCCCchHHHHHHHHHHHHHHHHh
Confidence               1235789999999999999999999999998887     664    344343 232211122255666665542  2


Q ss_pred             CC--------cEEE-ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCc----EEEeCCCCCccceeccCCCc
Q psy15555        356 EN--------NVEF-KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI----MIAHKSGGPKMDIVIEDPET  422 (488)
Q Consensus       356 ~~--------~v~~-~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~P----vI~~~~~~~~~eiv~~~~~~  422 (488)
                      ..        .|++ .+.++.+|+..+|+.||+|+.||..||+|++++||||||+|    +|.|..+|.. +.+.     
T Consensus       346 n~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~-~~l~-----  419 (797)
T PLN03063        346 NGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAG-QSLG-----  419 (797)
T ss_pred             hcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCch-hhhc-----
Confidence            11        2333 35789999999999999999999999999999999999999    9999998886 5542     


Q ss_pred             cccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        423 CRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       423 ~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                       .+|++++  |+++++++|.++++++++++++..++.++.+.++++...++.+++.+++...
T Consensus       420 -~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~  480 (797)
T PLN03063        420 -AGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIV  480 (797)
T ss_pred             -CCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence             3588876  9999999999999988999999999999999999999999999998887754

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.92  E-value=1.7e-22  Score=195.56  Aligned_cols=313  Identities=12%  Similarity=0.056  Sum_probs=195.7

Q ss_pred             hcCCcEEEecCCccchhhhh--h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHH
Q psy15555        157 SFQPDIYIDTMGYAFTYPLF--S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL  233 (488)
Q Consensus       157 ~~~pDiii~~~~~~~~~~~~--~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (488)
                      ..++||+|.++ |.......  + ...++|.|++.|....-+.++.-.   ...+++-+.+.... .......  .....
T Consensus       146 ~~~~dViH~He-Wm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~---~~~y~~l~~~~~d~-eA~~~~I--~~r~~  218 (590)
T cd03793         146 DEPAVVAHFHE-WQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGN---VDFYNNLDYFDVDK-EAGKRGI--YHRYC  218 (590)
T ss_pred             CCCCeEEEEcc-hhHhHHHHHHHHhCCCCCEEEEecccccccccccCC---cccchhhhhcchhh-hhhcccc--hHHHH
Confidence            45789999887 44444433  2 234778999999654322110000   00000000000000 0000000  11223


Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC------------------------CCCCCC
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH------------------------SKTDGP  289 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~------------------------~~~~~~  289 (488)
                      +|+.+...||.++++|+.+++....+++.+... |+|||+|.+.|.+...                        ....++
T Consensus       219 iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~  297 (590)
T cd03793         219 IERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK  297 (590)
T ss_pred             HHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence            677888999999999999999999998877655 9999999988754431                        012355


Q ss_pred             eEEEE-eeccCC-CCChHHHHHHHHHhHHhhhhhc--cCceEEEEEecCCCCCcH------HHHHHHHHHHHh-------
Q psy15555        290 VKIIS-VAQFRP-EKDHPLQLRAMYQLRQIISEEL--WDNLKLIFIGSTRNEEDE------VCVKDMQDLCKH-------  352 (488)
Q Consensus       290 ~~i~~-~g~~~~-~k~~~~ll~a~~~l~~~~~~~~--~~~~~l~ivG~~~~~~~~------~~~~~l~~~~~~-------  352 (488)
                      +++++ +||++. +||++.+|+|+.++........  ..=+-|++++.....-+.      .-.+++++-+++       
T Consensus       298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~  377 (590)
T cd03793         298 TLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGK  377 (590)
T ss_pred             eEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhh
Confidence            66666 799998 9999999999999987432110  012456777765221100      111112111111       


Q ss_pred             ------------------------------------------------------------cCCC----Cc--EEEecC-C
Q psy15555        353 ------------------------------------------------------------LSLE----NN--VEFKVN-L  365 (488)
Q Consensus       353 ------------------------------------------------------------~~l~----~~--v~~~g~-~  365 (488)
                                                                                  .+|.    ++  |+|++. +
T Consensus       378 ~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L  457 (590)
T cd03793         378 RLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFL  457 (590)
T ss_pred             hhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccccc
Confidence                                                                        1111    22  444432 1


Q ss_pred             C------hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCcccccee-cC-----
Q psy15555        366 P------YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFL-AC-----  430 (488)
Q Consensus       366 ~------~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~-~~-----  430 (488)
                      +      ..+..++|+.||++|+||.+|+||++++|||+||+|||+++.+|..   .|++.++   ...|+. .+     
T Consensus       458 ~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~---~~~gi~V~~r~~~~  534 (590)
T cd03793         458 SSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDP---ESYGIYIVDRRFKS  534 (590)
T ss_pred             CCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccC---CCceEEEecCCccc
Confidence            1      2357889999999999999999999999999999999999998773   1454432   023444 41     


Q ss_pred             ---CHHHHHHHHHHHHccCHHHHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        431 ---DEVEYAQTIKLILHLSQDTKTRISQNAV--SSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       431 ---~~~~l~~~i~~ll~~~~~~~~~~~~~a~--~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                         +.++++++|.++++ . +.++.+.+++.  +.++.|+|+++++.|.+.+.-+++
T Consensus       535 ~~e~v~~La~~m~~~~~-~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         535 PDESVQQLTQYMYEFCQ-L-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             hHHHHHHHHHHHHHHhC-C-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence               57889999999886 4 45555655554  666999999999999999987764

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.91  E-value=5.4e-22  Score=192.47  Aligned_cols=214  Identities=16%  Similarity=0.101  Sum_probs=157.7

Q ss_pred             HHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC-------CCCCCeEEEEeeccCCCCChH
Q psy15555        233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS-------KTDGPVKIISVAQFRPEKDHP  305 (488)
Q Consensus       233 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~-------~~~~~~~i~~~g~~~~~k~~~  305 (488)
                      ..++.+++++|.|++.|+..++.+.+. +  .++.+++|++|.+.|.+....       ...++++++|+|++.+.++.+
T Consensus       145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~  221 (373)
T cd04950         145 EAERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE  221 (373)
T ss_pred             HHHHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH
Confidence            467778899999999999999988874 3  579999999999888654321       224578999999999877765


Q ss_pred             HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC
Q psy15555        306 LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW  385 (488)
Q Consensus       306 ~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~  385 (488)
                      .+.++.    +..     |+++++++|.++..      .+..++   .. .+||+++|.++++++..+|+.+|+++.|+.
T Consensus       222 ll~~la----~~~-----p~~~~vliG~~~~~------~~~~~~---~~-~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~  282 (373)
T cd04950         222 LLEALA----KAR-----PDWSFVLIGPVDVS------IDPSAL---LR-LPNVHYLGPKPYKELPAYLAGFDVAILPFR  282 (373)
T ss_pred             HHHHHH----HHC-----CCCEEEEECCCcCc------cChhHh---cc-CCCEEEeCCCCHHHHHHHHHhCCEEecCCc
Confidence            444332    334     89999999987322      111111   11 368999999999999999999999999984


Q ss_pred             C-----CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy15555        386 N-----EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQNAVS  459 (488)
Q Consensus       386 ~-----e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~  459 (488)
                      .     +++|++++||||+|+|||+++.+    ++.+..    +.++++. |+++++++|.+++..+...+.+   ++.+
T Consensus       283 ~~~~~~~~~P~Kl~EylA~G~PVVat~~~----~~~~~~----~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~  351 (373)
T cd04950         283 LNELTRATSPLKLFEYLAAGKPVVATPLP----EVRRYE----DEVVLIADDPEEFVAAIEKALLEDGPARER---RRLR  351 (373)
T ss_pred             cchhhhcCCcchHHHHhccCCCEEecCcH----HHHhhc----CcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHH
Confidence            3     35789999999999999999754    444443    3355544 8999999999976523332222   1222


Q ss_pred             HHhhcCHHHHHHHHHHHHHH
Q psy15555        460 SVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       460 ~~~~~s~~~~~~~~~~~~~~  479 (488)
                      .++.+||+..++++.+.+++
T Consensus       352 ~~~~~sW~~~a~~~~~~l~~  371 (373)
T cd04950         352 LAAQNSWDARAAEMLEALQE  371 (373)
T ss_pred             HHHHCCHHHHHHHHHHHHHh
Confidence            45899999999999876654

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.91  E-value=3.6e-23  Score=178.39  Aligned_cols=159  Identities=28%  Similarity=0.459  Sum_probs=141.9

Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHh-hhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQI-ISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~-~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                      ...++++++++|++.+.||++.+++|+..+.++ .     +++.++|+|.++      ....+...++..++.+++.++|
T Consensus        11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~-----~~~~l~i~G~~~------~~~~~~~~~~~~~~~~~i~~~~   79 (172)
T PF00534_consen   11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKN-----PNYKLVIVGDGE------YKKELKNLIEKLNLKENIIFLG   79 (172)
T ss_dssp             T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHH-----TTEEEEEESHCC------HHHHHHHHHHHTTCGTTEEEEE
T ss_pred             CCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcC-----CCeEEEEEcccc------cccccccccccccccccccccc
Confidence            346789999999999999999999999999875 5     899999999663      3377888999999989999999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKL  441 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~  441 (488)
                      .++.+++..+|+.||+++.||..|++|.+++|||++|+|||+++.++.. +++.++    .+|++++  |+++++++|.+
T Consensus        80 ~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~-e~~~~~----~~g~~~~~~~~~~l~~~i~~  154 (172)
T PF00534_consen   80 YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNN-EIINDG----VNGFLFDPNDIEELADAIEK  154 (172)
T ss_dssp             SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHH-HHSGTT----TSEEEESTTSHHHHHHHHHH
T ss_pred             cccccccccccccceeccccccccccccccccccccccceeeccccCCc-eeeccc----cceEEeCCCCHHHHHHHHHH
Confidence            9988999999999999999999999999999999999999999988886 999888    7899986  88999999999


Q ss_pred             HHccCHHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~  460 (488)
                      +++ +++.++.|+++++++
T Consensus       155 ~l~-~~~~~~~l~~~~~~~  172 (172)
T PF00534_consen  155 LLN-DPELRQKLGKNARER  172 (172)
T ss_dssp             HHH-HHHHHHHHHHHHHHH
T ss_pred             HHC-CHHHHHHHHHHhcCC
Confidence            999 999999999999863

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.90  E-value=8.7e-22  Score=205.27  Aligned_cols=289  Identities=13%  Similarity=0.189  Sum_probs=204.5

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +.....+|| +|..+......+|.. + .....++.+++|.|+...+....++.+                       ..
T Consensus       126 ~~~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~-----------------------~~  182 (726)
T PRK14501        126 AIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWR-----------------------EE  182 (726)
T ss_pred             HHHHhcCCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCCh-----------------------HH
Confidence            444555665 665555444445532 2 234678899999998766554322211                       01


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHh----c------------cCCceEEEcCCCCchhhhccCC----------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLW----N------------CQLKTYKLYPPCDTEDLKKITH----------  283 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~------------~~~k~~vi~~~~d~~~~~~~~~----------  283 (488)
                      ++     ..+-.+|.|-+++....+.|.+..    +            ...++.++|+|+|.+.+.+...          
T Consensus       183 ll-----~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~  257 (726)
T PRK14501        183 IL-----EGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRR  257 (726)
T ss_pred             HH-----HHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHH
Confidence            11     133567999999999888776531    1            1226889999999998865431          


Q ss_pred             --CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc----eEEEEEecCCCCC---cHHHHHHHHHHHHhcC
Q psy15555        284 --SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN----LKLIFIGSTRNEE---DEVCVKDMQDLCKHLS  354 (488)
Q Consensus       284 --~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~----~~l~ivG~~~~~~---~~~~~~~l~~~~~~~~  354 (488)
                        ...+++++++++||+.+.||+..+++|+.++.+++     |+    ++|+++|.+....   ..+..+++.+++.+.+
T Consensus       258 lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~-----p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in  332 (726)
T PRK14501        258 LRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKN-----PEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRIN  332 (726)
T ss_pred             HHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhC-----ccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence              11246779999999999999999999999998877     54    6888887431111   1123334444433321


Q ss_pred             -------CCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-----cEEEeCCCCCccceeccCCCc
Q psy15555        355 -------LENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-----IMIAHKSGGPKMDIVIEDPET  422 (488)
Q Consensus       355 -------l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-----PvI~~~~~~~~~eiv~~~~~~  422 (488)
                             ..+.+.+.+.++.+|+..+|+.||+++.||..|++|++++|||+||+     ||++...|+.. ++.      
T Consensus       333 ~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~-~l~------  405 (726)
T PRK14501        333 GEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA-ELA------  405 (726)
T ss_pred             hhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhH-HhC------
Confidence                   11234577889999999999999999999999999999999999955     66666556554 553      


Q ss_pred             cccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhh
Q psy15555        423 CRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       423 ~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                        .|++++  |+++++++|.+++.++++++.+..+++++.+.+|||+.+++++++.++++..+
T Consensus       406 --~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~  466 (726)
T PRK14501        406 --EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK  466 (726)
T ss_pred             --cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence              377766  99999999999998556677777778888899999999999999999987543

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.88  E-value=6.4e-20  Score=177.34  Aligned_cols=405  Identities=14%  Similarity=0.078  Sum_probs=250.9

Q ss_pred             cEEEEeccCC---CCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccc--cC------------
Q psy15555         53 KTVAFFHPYC---NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIV--LP------------  115 (488)
Q Consensus        53 ~rI~~~~~~~---~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------  115 (488)
                      |||+++....   ...||-.-++..+.++|++++  +++.++.+..+.......+..+......  ..            
T Consensus         1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (487)
T COG0297           1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYG   78 (487)
T ss_pred             CcceeeeeeecCccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeec
Confidence            7888776543   357788899999999999984  6666666654432332322211111111  00            


Q ss_pred             -CCeeEEEEeeccceeec---cCchhHHHHHHHHHHHHHHHHHhhh----cCCcEEEecCCccchhhhhhh-----hCCC
Q psy15555        116 -DQVINFVYLYRRKFVEA---SLYPYFTLLGQSIGSMILGVEALLS----FQPDIYIDTMGYAFTYPLFSY-----IGGS  182 (488)
Q Consensus       116 -~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~----~~pDiii~~~~~~~~~~~~~~-----~~~~  182 (488)
                       ..++.+..+..+....+   ..+.......++-.........+..    ..|||||.+.....+++....     ...+
T Consensus        79 ~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i  158 (487)
T COG0297          79 KDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYII  158 (487)
T ss_pred             ccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccC
Confidence             00022333332222222   1111111111111112223333322    469999998855555554422     2367


Q ss_pred             eeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHH-Hhc
Q psy15555        183 KVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQ-LWN  261 (488)
Q Consensus       183 ~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-~~~  261 (488)
                      |.++++|.-...--+ ..............+. ...      ..++ ....+.+.-+..+|.+.++|+..++.+.. .++
T Consensus       159 ~tVfTIHNl~~qG~~-~~~~~~~lgLp~~~~~-~~~------l~~~-~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g  229 (487)
T COG0297         159 PTVFTIHNLAYQGLF-RLQYLEELGLPFEAYA-SFG------LEFY-GQISFLKGGLYYADAVTTVSPTYAGEIYTPEYG  229 (487)
T ss_pred             CeEEEEeeceeeccc-chhhHHHhcCCHHHhh-hce------eeec-CcchhhhhhheeccEEEEECHHHHHhhcccccc
Confidence            889999942210000 0000000000000000 000      0000 01134555678899999999999888872 121


Q ss_pred             ---------cCCceEEEcCCCCchhhhccCCC----------------------------CCCCCeEEEEeeccCCCCCh
Q psy15555        262 ---------CQLKTYKLYPPCDTEDLKKITHS----------------------------KTDGPVKIISVAQFRPEKDH  304 (488)
Q Consensus       262 ---------~~~k~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~~i~~~g~~~~~k~~  304 (488)
                               ...++.-|.|++|.+.+.+....                            ...+.+.+.++||+..+||+
T Consensus       230 ~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~  309 (487)
T COG0297         230 EGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGL  309 (487)
T ss_pred             ccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccch
Confidence                     11266778888887665443311                            12356899999999999999


Q ss_pred             HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcC
Q psy15555        305 PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM  384 (488)
Q Consensus       305 ~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s  384 (488)
                      +.+++++..+.++       ..++++.|.+ +.   +.-+.+.++++.+.  .++...-..+..-...+|+.||++++||
T Consensus       310 dl~~~~i~~~l~~-------~~~~vilG~g-d~---~le~~~~~la~~~~--~~~~~~i~~~~~la~~i~agaD~~lmPS  376 (487)
T COG0297         310 DLLLEAIDELLEQ-------GWQLVLLGTG-DP---ELEEALRALASRHP--GRVLVVIGYDEPLAHLIYAGADVILMPS  376 (487)
T ss_pred             hHHHHHHHHHHHh-------CceEEEEecC-cH---HHHHHHHHHHHhcC--ceEEEEeeecHHHHHHHHhcCCEEEeCC
Confidence            9999999999876       4899999998 22   56677777777765  3565555556667788999999999999


Q ss_pred             CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCc----cccceecC--CHHHHHHHHHHHHc---cCHHHHHHHHH
Q psy15555        385 WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPET----CRNGFLAC--DEVEYAQTIKLILH---LSQDTKTRISQ  455 (488)
Q Consensus       385 ~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~----~~~g~~~~--~~~~l~~~i~~ll~---~~~~~~~~~~~  455 (488)
                      ..|++|++-++||.+|+++|+...||.. |.+.+.+..    ..+|+++.  |+++++.+|.+.+.   .++...+.+..
T Consensus       377 rfEPcGL~ql~amryGtvpIv~~tGGLa-dTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~  455 (487)
T COG0297         377 RFEPCGLTQLYAMRYGTLPIVRETGGLA-DTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQP  455 (487)
T ss_pred             cCcCCcHHHHHHHHcCCcceEcccCCcc-ceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence            9999999999999999999999999998 655543111    37898875  99999999987654   12333555555


Q ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        456 NAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       456 ~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ++..  ..|||+..++++.+.|+.++...
T Consensus       456 ~~m~--~d~sw~~sa~~y~~lY~~~~~~~  482 (487)
T COG0297         456 NAMG--ADFSWDLSAKEYVELYKPLLSKP  482 (487)
T ss_pred             hhcc--cccCchhHHHHHHHHHHHHhccc
Confidence            5544  79999999999999999987654

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.88  E-value=7.1e-20  Score=177.94  Aligned_cols=286  Identities=15%  Similarity=0.143  Sum_probs=212.8

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++.+..+|| +|..+......+|.. + .....++.+++|.|+...++...++.+                       ..
T Consensus       125 ~i~~~~~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r-----------------------~~  181 (487)
T TIGR02398       125 AACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWR-----------------------EQ  181 (487)
T ss_pred             HHHHhcCCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCch-----------------------HH
Confidence            444556665 655554444444432 2 234678899999999877664422211                       11


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-------------------------------------cCCceEEEcCC
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-------------------------------------CQLKTYKLYPP  272 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-------------------------------------~~~k~~vi~~~  272 (488)
                      ++     ..+-.+|.|-+++...++.|.+...                                     ...++.++|.|
T Consensus       182 ll-----~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiG  256 (487)
T TIGR02398       182 II-----GSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVG  256 (487)
T ss_pred             HH-----HHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECE
Confidence            11     1234579999999999988876221                                     11147889999


Q ss_pred             CCchhhhccCCC------------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc----eEEEEEecCCC
Q psy15555        273 CDTEDLKKITHS------------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN----LKLIFIGSTRN  336 (488)
Q Consensus       273 ~d~~~~~~~~~~------------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~----~~l~ivG~~~~  336 (488)
                      +|++.+......            ...++.+|+.++|++..||+...++|+.++.+++     |+    +.|+++|....
T Consensus       257 ID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~-----Pe~~gkv~Lvqi~~psr  331 (487)
T TIGR02398       257 TDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR-----PELLGKVTLVTACVPAA  331 (487)
T ss_pred             ecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC-----ccccCceEEEEEeCCCc
Confidence            999988554211            1236789999999999999999999999999888     64    68888886543


Q ss_pred             CCc---HHHHHHHHHHHHhc-------CCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC----c
Q psy15555        337 EED---EVCVKDMQDLCKHL-------SLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL----I  402 (488)
Q Consensus       337 ~~~---~~~~~~l~~~~~~~-------~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~----P  402 (488)
                      .+.   .+..+++++++.+.       +..+-+.+.+.++.+++..+|+.||+++.+|..||++++..|+++|+.    |
T Consensus       332 ~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~Gv  411 (487)
T TIGR02398       332 SGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGV  411 (487)
T ss_pred             ccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCC
Confidence            222   23445666666554       445567888999999999999999999999999999999999999988    9


Q ss_pred             EEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        403 MIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       403 vI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +|.|..+|.. +..       ..+++++  |+++++++|.+.+++..+++++-.+..++.+.+++....++.+++-+.+
T Consensus       412 LILSefaGaa-~~l-------~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~  482 (487)
T TIGR02398       412 LVLSEFAGAA-VEL-------KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP  482 (487)
T ss_pred             EEEeccccch-hhc-------CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence            9999998886 333       2367776  9999999999999988888888888888888999999999988876643

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.88  E-value=2.8e-20  Score=181.70  Aligned_cols=343  Identities=12%  Similarity=0.027  Sum_probs=205.2

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      +|||.+..   +.. |+......++++|++.++++.++...+.  .......+   ..         .++..++..    
T Consensus         1 ~~ki~i~~---Ggt-~G~i~~a~l~~~L~~~~~~~~~~~~~~~--~~~~~~~~---~~---------~~~~~l~~~----   58 (380)
T PRK00025          1 PLRIAIVA---GEV-SGDLLGAGLIRALKARAPNLEFVGVGGP--RMQAAGCE---SL---------FDMEELAVM----   58 (380)
T ss_pred             CceEEEEe---cCc-CHHHHHHHHHHHHHhcCCCcEEEEEccH--HHHhCCCc---cc---------cCHHHhhhc----
Confidence            36887753   223 3554444599999988777777766443  11110000   00         001111111    


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCC---ccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMG---YAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~---~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                       ..+..+......+.....+.+++++++||++|.+..   ++.....+ ...++|++.+.+...  |             
T Consensus        59 -g~~~~~~~~~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a-~~~~ip~i~~~~~~~--~-------------  121 (380)
T PRK00025         59 -GLVEVLPRLPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKL-RKAGIPTIHYVSPSV--W-------------  121 (380)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHH-HHCCCCEEEEeCCch--h-------------
Confidence             112233344445556677889999999999876541   22222122 256889876544210  0             


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhh-ccC-----
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLK-KIT-----  282 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~-~~~-----  282 (488)
                                  .....        ..+.+.+.+|.++++|+..++.+.+. +.  ++.+++|++...... +..     
T Consensus       122 ------------~~~~~--------~~~~~~~~~d~i~~~~~~~~~~~~~~-g~--~~~~~G~p~~~~~~~~~~~~~~~~  178 (380)
T PRK00025        122 ------------AWRQG--------RAFKIAKATDHVLALFPFEAAFYDKL-GV--PVTFVGHPLADAIPLLPDRAAARA  178 (380)
T ss_pred             ------------hcCch--------HHHHHHHHHhhheeCCccCHHHHHhc-CC--CeEEECcCHHHhcccccChHHHHH
Confidence                        00000        01123456799999999999998774 33  377788775322111 000     


Q ss_pred             -CCCCCCCeE-EEEeeccCCC--CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhc-CCCC
Q psy15555        283 -HSKTDGPVK-IISVAQFRPE--KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHL-SLEN  357 (488)
Q Consensus       283 -~~~~~~~~~-i~~~g~~~~~--k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~l~~  357 (488)
                       -..+.++++ +++.|+...+  +..+.+++++..+.++.     |+++++++|+++     +..+++++.+++. ++. 
T Consensus       179 ~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~-----~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~-  247 (380)
T PRK00025        179 RLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRY-----PDLRFVLPLVNP-----KRREQIEEALAEYAGLE-  247 (380)
T ss_pred             HcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEecCCh-----hhHHHHHHHHhhcCCCC-
Confidence             012233444 4555533222  34678899999988776     789999998754     3446777777766 543 


Q ss_pred             cEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC-----------------CCCccceeccCC
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS-----------------GGPKMDIVIEDP  420 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-----------------~~~~~eiv~~~~  420 (488)
                       +.+.+    +++..+|+.||+++.+|     |.+.+|||++|+|+|++..                 ++.. +++.+. 
T Consensus       248 -v~~~~----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-  315 (380)
T PRK00025        248 -VTLLD----GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLP-NLLAGR-  315 (380)
T ss_pred             -eEEEc----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehH-HHhcCC-
Confidence             44432    58999999999999987     8888999999999998733                 2222 444433 


Q ss_pred             CccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        421 ETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       421 ~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                       ....+++.+  |++++++.+.++++ |++.+++|++++.+..+.. ....++++.+.+.+++.
T Consensus       316 -~~~~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~~  376 (380)
T PRK00025        316 -ELVPELLQEEATPEKLARALLPLLA-DGARRQALLEGFTELHQQL-RCGADERAAQAVLELLK  376 (380)
T ss_pred             -CcchhhcCCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHhh
Confidence             001234443  89999999999999 9999999999986665443 23355666666655543

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.87  E-value=3.1e-20  Score=179.97  Aligned_cols=256  Identities=14%  Similarity=0.084  Sum_probs=168.1

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchh--hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTY--PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~--~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+.+++.+||+||.+..+...+  .+++...++|++. ++....+.                     + ........
T Consensus        76 ~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h-~~~g~~s~---------------------~-~~~~~~~~  132 (365)
T TIGR00236        76 EGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGH-VEAGLRTG---------------------D-RYSPMPEE  132 (365)
T ss_pred             HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEE-EeCCCCcC---------------------C-CCCCCccH
Confidence            4566788999999999876444333  2334467889753 33211000                     0 00000000


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-Cchhhhcc---C----CCCCCCCeEEEEee-c
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKI---T----HSKTDGPVKIISVA-Q  297 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~---~----~~~~~~~~~i~~~g-~  297 (488)
                      ..+.      ...+.+|.++++|+..++++.+.+..++++.+++|++ |.......   .    .....++.++++.+ +
T Consensus       133 ~~r~------~~~~~ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr  206 (365)
T TIGR00236       133 INRQ------LTGHIADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHR  206 (365)
T ss_pred             HHHH------HHHHHHHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCc
Confidence            0010      1123479999999999999998765556899999995 43221111   0    11112234455544 4


Q ss_pred             c-CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHh
Q psy15555        298 F-RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSE  376 (488)
Q Consensus       298 ~-~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~  376 (488)
                      . ...|+++.+++|+.++.++.     |+++++++|.+. .   ...+.   +.+..+..++|.+.+.++..++..+++.
T Consensus       207 ~~~~~k~~~~ll~a~~~l~~~~-----~~~~~vi~~~~~-~---~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~  274 (365)
T TIGR00236       207 RENVGEPLENIFKAIREIVEEF-----EDVQIVYPVHLN-P---VVREP---LHKHLGDSKRVHLIEPLEYLDFLNLAAN  274 (365)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHC-----CCCEEEEECCCC-h---HHHHH---HHHHhCCCCCEEEECCCChHHHHHHHHh
Confidence            3 23488999999999988776     788888875432 1   11122   2333455578999999988999999999


Q ss_pred             CcEEEEcCCCCcCCccHHHHHHcCCcEEEeC-CCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        377 GLIGLHAMWNEHFGIGIVECMAAGLIMIAHK-SGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       377 ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~-~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      ||+++.+|     |..++|||++|+|||++. .++.. +++..+     .+.+++ |++++++++.++++ +++.+++++
T Consensus       275 ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~-e~~~~g-----~~~lv~~d~~~i~~ai~~ll~-~~~~~~~~~  342 (365)
T TIGR00236       275 SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERP-ETVEAG-----TNKLVGTDKENITKAAKRLLT-DPDEYKKMS  342 (365)
T ss_pred             CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCCh-HHHhcC-----ceEEeCCCHHHHHHHHHHHHh-ChHHHHHhh
Confidence            99998877     445799999999999974 45553 777654     455555 99999999999999 999998888


Q ss_pred             HHH
Q psy15555        455 QNA  457 (488)
Q Consensus       455 ~~a  457 (488)
                      +++
T Consensus       343 ~~~  345 (365)
T TIGR00236       343 NAS  345 (365)
T ss_pred             hcC
Confidence            766

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.87  E-value=1.2e-19  Score=172.80  Aligned_cols=250  Identities=17%  Similarity=0.111  Sum_probs=170.7

Q ss_pred             HHhhhcCC-cEEEecCCccch----hhhhhh--hCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhH
Q psy15555        153 EALLSFQP-DIYIDTMGYAFT----YPLFSY--IGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKL  225 (488)
Q Consensus       153 ~~l~~~~p-Diii~~~~~~~~----~~~~~~--~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      +.+...+| |+||.+.+....    ..++..  ..++|++..+|.-.      +..                  .... .
T Consensus        57 ~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~------~~~------------------~~~~-~  111 (333)
T PRK09814         57 GILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIE------PLR------------------FDSN-Y  111 (333)
T ss_pred             HHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcH------HHh------------------cccc-c
Confidence            45667888 888766533221    112211  23699999999532      100                  0000 0


Q ss_pred             HHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChH
Q psy15555        226 FYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHP  305 (488)
Q Consensus       226 ~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~  305 (488)
                          .....++.+++++|.+++.|+.+++.+.+.+....++.++++..+...... . .....++.++|+|++.....  
T Consensus       112 ----~~~~~~~~~~~~aD~iI~~S~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~-~-~~~~~~~~i~yaG~l~k~~~--  183 (333)
T PRK09814        112 ----YLMKEEIDMLNLADVLIVHSKKMKDRLVEEGLTTDKIIVQGIFDYLNDIEL-V-KTPSFQKKINFAGNLEKSPF--  183 (333)
T ss_pred             ----hhhHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcCceEecccccccccccc-c-ccccCCceEEEecChhhchH--
Confidence                012345667889999999999999999886443446666655433211111 1 11234568999999983221  


Q ss_pred             HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcC-
Q psy15555        306 LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM-  384 (488)
Q Consensus       306 ~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s-  384 (488)
                        ++      ...     ++++|+++|.|+..      +         ...++|+|.|+++.+|+..+|+. |+++... 
T Consensus       184 --l~------~~~-----~~~~l~i~G~g~~~------~---------~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~  234 (333)
T PRK09814        184 --LK------NWS-----QGIKLTVFGPNPED------L---------ENSANISYKGWFDPEELPNELSK-GFGLVWDG  234 (333)
T ss_pred             --HH------hcC-----CCCeEEEECCCccc------c---------ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcC
Confidence              11      122     67899999999743      1         23578999999999999999998 6444322 


Q ss_pred             C----------CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        385 W----------NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       385 ~----------~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      .          .-.+|+++.|+||+|+|||+++.++.. ++++++    ++|+++++.+++++++.++   +++.+++|+
T Consensus       235 ~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~-~~V~~~----~~G~~v~~~~el~~~l~~~---~~~~~~~m~  306 (333)
T PRK09814        235 DTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIA-DFIVEN----GLGFVVDSLEELPEIIDNI---TEEEYQEMV  306 (333)
T ss_pred             CCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHH-HHHHhC----CceEEeCCHHHHHHHHHhc---CHHHHHHHH
Confidence            1          235688899999999999999988886 999988    9999999999999999884   467789999


Q ss_pred             HHHHHHHhhcCHHHHHHH
Q psy15555        455 QNAVSSVDRFSMEEFKNG  472 (488)
Q Consensus       455 ~~a~~~~~~~s~~~~~~~  472 (488)
                      +++++.++++....+.++
T Consensus       307 ~n~~~~~~~~~~g~~~~~  324 (333)
T PRK09814        307 ENVKKISKLLRNGYFTKK  324 (333)
T ss_pred             HHHHHHHHHHhcchhHHH
Confidence            999998877666555554

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.87  E-value=3.5e-20  Score=167.40  Aligned_cols=120  Identities=29%  Similarity=0.398  Sum_probs=102.6

Q ss_pred             EeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC-ChHHHHH
Q psy15555        294 SVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL-PYEDMKK  372 (488)
Q Consensus       294 ~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~-~~~el~~  372 (488)
                      ++|++.+.||++.+++++..+.++.     ++++++++|.+...      ....+.+.+.+..++|.+.|.+ +.+++..
T Consensus       109 ~~g~~~~~k~~~~~~~a~~~l~~~~-----~~~~~~i~G~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  177 (229)
T cd01635         109 FVGRLAPEKGLDDLIEAFALLKERG-----PDLKLVIAGDGPER------EYLEELLAALLLLDRVIFLGGLDPEELLAL  177 (229)
T ss_pred             EEEeecccCCHHHHHHHHHHHHHhC-----CCeEEEEEeCCCCh------HHHHHHHHhcCCcccEEEeCCCCcHHHHHH
Confidence            9999999999999999999999877     89999999998643      3444445666777899999997 4566666


Q ss_pred             HHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA  429 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~  429 (488)
                      +++.||+++.||..|++|.+++|||++|+|+|+++.++.. |++.++    ++|+++
T Consensus       178 ~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~-e~i~~~----~~g~~~  229 (229)
T cd01635         178 LLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPP-EIVEDG----LTGLLV  229 (229)
T ss_pred             HhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcc-eEEECC----CceEEC
Confidence            7777999999999999999999999999999999999886 878777    788764

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>KOG2941|consensus

Probab=99.84  E-value=1.2e-17  Score=147.85  Aligned_cols=355  Identities=16%  Similarity=0.215  Sum_probs=231.4

Q ss_pred             CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccC---chhH
Q psy15555         62 CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASL---YPYF  138 (488)
Q Consensus        62 ~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~  138 (488)
                      ++..|-..|..++. ..|++.+.+++++-+..+  .+.+++.+.          ++ +.+...+.........   +..+
T Consensus        20 LGDvGRSPRMqYHA-~Sla~~gf~VdliGy~~s--~p~e~l~~h----------pr-I~ih~m~~l~~~~~~p~~~~l~l   85 (444)
T KOG2941|consen   20 LGDVGRSPRMQYHA-LSLAKLGFQVDLIGYVES--IPLEELLNH----------PR-IRIHGMPNLPFLQGGPRVLFLPL   85 (444)
T ss_pred             ecccCCChHHHHHH-HHHHHcCCeEEEEEecCC--CChHHHhcC----------Cc-eEEEeCCCCcccCCCchhhhhHH
Confidence            44455566776665 678888777777777766  233333331          22 6665555544333222   2233


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCcEEEecCC--ccchhhhh---hhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccc
Q psy15555        139 TLLGQSIGSMILGVEALLSFQPDIYIDTMG--YAFTYPLF---SYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQR  213 (488)
Q Consensus       139 ~~~~~~~~~~~~~~~~l~~~~pDiii~~~~--~~~~~~~~---~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~  213 (488)
                      +.+.+++..   .+.++....||++..+.+  .|.. .++   ...++.+.++..|.-..+         -         
T Consensus        86 Kvf~Qfl~L---l~aL~~~~~~~~ilvQNPP~iPtl-iv~~~~~~l~~~KfiIDWHNy~Ys---------l---------  143 (444)
T KOG2941|consen   86 KVFWQFLSL---LWALFVLRPPDIILVQNPPSIPTL-IVCVLYSILTGAKFIIDWHNYGYS---------L---------  143 (444)
T ss_pred             HHHHHHHHH---HHHHHhccCCcEEEEeCCCCCchH-HHHHHHHHHhcceEEEEehhhHHH---------H---------
Confidence            444444433   333444678998876542  2222 222   235789999977743211         0         


Q ss_pred             cccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcC--C---CCchh----hhccCC-
Q psy15555        214 VANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYP--P---CDTED----LKKITH-  283 (488)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~--~---~d~~~----~~~~~~-  283 (488)
                        ..++........-+..++.++++.+.||.-+|+|+.|++.+.+.++.. +..+++.  +   .+.+.    |.+... 
T Consensus       144 --~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi~-ra~v~YDrPps~~~~l~~~H~lf~~l~~d  220 (444)
T KOG2941|consen  144 --QLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGIN-RAKVLYDRPPSKPTPLDEQHELFMKLAGD  220 (444)
T ss_pred             --HHHhhcCCCCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCCc-eeEEEecCCCCCCCchhHHHHHHhhhccc
Confidence              000011111223455667788899999999999999999999999953 3444442  2   11111    111100 


Q ss_pred             ---------C--------------------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhh--hccCceEEEEEe
Q psy15555        284 ---------S--------------------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISE--ELWDNLKLIFIG  332 (488)
Q Consensus       284 ---------~--------------------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~--~~~~~~~l~ivG  332 (488)
                               +                    ..+...+++.....++.+++..+++|+....++..+  -..|++..+|.|
T Consensus       221 ~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITG  300 (444)
T KOG2941|consen  221 HSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITG  300 (444)
T ss_pred             cchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcC
Confidence                     0                    123344566666788999999999999855332111  123889999999


Q ss_pred             cCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEE--EcC-CCCcCCccHHHHHHcCCcEEEeCCC
Q psy15555        333 STRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGL--HAM-WNEHFGIGIVECMAAGLIMIAHKSG  409 (488)
Q Consensus       333 ~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v--~~s-~~e~~g~~~lEa~a~G~PvI~~~~~  409 (488)
                      .||..      +...+.+++.++...-....+...++.+.+++.||++|  ++| ..=..|+++++...||+||++-+..
T Consensus       301 KGPlk------E~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk  374 (444)
T KOG2941|consen  301 KGPLK------EKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK  374 (444)
T ss_pred             CCchh------HHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch
Confidence            99976      77788888888876556678888899999999999655  444 3345789999999999999999998


Q ss_pred             CCccceeccCCCccccceecCCHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHhhcCHH
Q psy15555        410 GPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILH---LSQDTKTRISQNAVSSVDRFSME  467 (488)
Q Consensus       410 ~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~a~~~~~~~s~~  467 (488)
                      ... |+++++    +||++++|.+++++.+..++.   .+.+...++..++++. +...|+
T Consensus       375 cl~-ELVkh~----eNGlvF~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~  429 (444)
T KOG2941|consen  375 CLD-ELVKHG----ENGLVFEDSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWD  429 (444)
T ss_pred             hHH-HHHhcC----CCceEeccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHH
Confidence            885 999999    999999999999999999987   2567888888888765 334454

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.84  E-value=4.1e-19  Score=172.48  Aligned_cols=268  Identities=13%  Similarity=0.064  Sum_probs=176.3

Q ss_pred             HHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhH
Q psy15555        148 MILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKL  225 (488)
Q Consensus       148 ~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (488)
                      .....+.+++.+||+|+.+..+...+.  .+....++|++...+.-. +++                   .. ...   .
T Consensus        77 ~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~-------------------~~-~~~---~  132 (363)
T cd03786          77 LIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD-------------------RG-MPD---E  132 (363)
T ss_pred             HHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC-------------------CC-CCc---h
Confidence            345666778889999987754443332  233356889775333110 000                   00 000   0


Q ss_pred             HHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-CchhhhccC---------CCCCCCCeEEEEe
Q psy15555        226 FYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKIT---------HSKTDGPVKIISV  295 (488)
Q Consensus       226 ~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~~---------~~~~~~~~~i~~~  295 (488)
                       .      ....+.+.+|.+++.|+..++++.+.+..++++.+++|++ |...+....         ....+++.++++.
T Consensus       133 -~------~r~~~~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~  205 (363)
T cd03786         133 -E------NRHAIDKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTL  205 (363)
T ss_pred             -H------HHHHHHHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEe
Confidence             0      0111335679999999999999998766566899999984 543222111         0112345677788


Q ss_pred             eccCC---CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC-CCcEEEecCCChHHHH
Q psy15555        296 AQFRP---EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL-ENNVEFKVNLPYEDMK  371 (488)
Q Consensus       296 g~~~~---~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l-~~~v~~~g~~~~~el~  371 (488)
                      |+...   .|+++.+++|++.+.+       .++.+++.|.++.      .+++++.++++++ .++|.+.+..+.+++.
T Consensus       206 ~r~~~~~~~k~~~~l~~al~~l~~-------~~~~vi~~~~~~~------~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~  272 (363)
T cd03786         206 HRVENVDDGEQLEEILEALAELAE-------EDVPVVFPNHPRT------RPRIREAGLEFLGHHPNVLLISPLGYLYFL  272 (363)
T ss_pred             CCccccCChHHHHHHHHHHHHHHh-------cCCEEEEECCCCh------HHHHHHHHHhhccCCCCEEEECCcCHHHHH
Confidence            88764   6899999999998853       2356666555432      2677777777765 5789999988889999


Q ss_pred             HHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHH
Q psy15555        372 KEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTK  450 (488)
Q Consensus       372 ~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~  450 (488)
                      .+|+.||++|.+|.    | ...|||++|+|+|+++..+...+.++.+     .+..+. |++++++++.++++ +++.+
T Consensus       273 ~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-----~~~~~~~~~~~i~~~i~~ll~-~~~~~  341 (363)
T cd03786         273 LLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-----TNVLVGTDPEAILAAIEKLLS-DEFAY  341 (363)
T ss_pred             HHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-----eEEecCCCHHHHHHHHHHHhc-Cchhh
Confidence            99999999999884    3 4789999999999987543333555543     344444 79999999999999 88777


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHH
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTF  476 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~  476 (488)
                      .+|.      ...|.-...++++.++
T Consensus       342 ~~~~------~~~~~~~~a~~~I~~~  361 (363)
T cd03786         342 SLMS------INPYGDGNASERIVEI  361 (363)
T ss_pred             hcCC------CCCCCCCHHHHHHHHH
Confidence            7764      2344444445555444

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.81  E-value=1.5e-17  Score=171.89  Aligned_cols=289  Identities=10%  Similarity=0.150  Sum_probs=202.9

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++.+..+|| +|..+..+..++|.. + .....++.+++|.|+.+.++...+..+.                       .
T Consensus       224 ~i~~~~~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~-----------------------e  280 (934)
T PLN03064        224 VVNEHYEEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRS-----------------------E  280 (934)
T ss_pred             HHHHhcCCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHH-----------------------H
Confidence            334555665 665565555555533 2 2456789999999998776654332211                       1


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHh----cc------------CCceEEEcCCCCchhhhccCCC---------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLW----NC------------QLKTYKLYPPCDTEDLKKITHS---------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~~------------~~k~~vi~~~~d~~~~~~~~~~---------  284 (488)
                      ++     ..+-.+|.|-+++...++.|.+..    +.            ..++.++|-|+|.+.+......         
T Consensus       281 lL-----~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~  355 (934)
T PLN03064        281 LL-----RSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKE  355 (934)
T ss_pred             HH-----HHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHH
Confidence            11     123458999999999999987622    11            1146677889999888654211         


Q ss_pred             ---CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceE--EEEE--ecCCCCCcHHH---HHHHHHHHHhcC
Q psy15555        285 ---KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLK--LIFI--GSTRNEEDEVC---VKDMQDLCKHLS  354 (488)
Q Consensus       285 ---~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~--l~iv--G~~~~~~~~~~---~~~l~~~~~~~~  354 (488)
                         ...++.+|+.++|++..||+..-++||.++.+++     |+++  ++++  .-....+.++|   ..++.+++.+.+
T Consensus       356 lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~-----Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN  430 (934)
T PLN03064        356 LKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN-----PEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRIN  430 (934)
T ss_pred             HHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhC-----ccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence               1236789999999999999999999999998887     6643  4444  21111111132   233444333322


Q ss_pred             ----CC--CcEEEe-cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC----cEEEeCCCCCccceeccCCCcc
Q psy15555        355 ----LE--NNVEFK-VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL----IMIAHKSGGPKMDIVIEDPETC  423 (488)
Q Consensus       355 ----l~--~~v~~~-g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~----PvI~~~~~~~~~eiv~~~~~~~  423 (488)
                          -.  ..|+++ ..++.+|+..+|+.||+++.+|..||++++..||++|+.    ++|.+...|.. +.+.      
T Consensus       431 ~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa-~~L~------  503 (934)
T PLN03064        431 GRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA-QSLG------  503 (934)
T ss_pred             hhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchH-HHhC------
Confidence                11  124444 457999999999999999999999999999999999944    44448888776 4453      


Q ss_pred             ccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        424 RNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       424 ~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                      ..+++++  |.++++++|.+++.|+++++++..++.++.+..+++..+++.+++-++...
T Consensus       504 ~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        504 AGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV  563 (934)
T ss_pred             CceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence            2477776  999999999999998999999999999999999999999999988887764

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.81  E-value=3.4e-17  Score=157.94  Aligned_cols=225  Identities=24%  Similarity=0.367  Sum_probs=184.8

Q ss_pred             ccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC-CCCCCC-CeEEEEeeccCCCCChHHHHHHHHHhHHhh
Q psy15555        241 YSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-HSKTDG-PVKIISVAQFRPEKDHPLQLRAMYQLRQII  318 (488)
Q Consensus       241 ~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~-~~~~~~-~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~  318 (488)
                      ..+.++..+......+...+. ..++.+++++++...+.... ...... ...++++|++.+.|+++.+++++..+....
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~  228 (381)
T COG0438         150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRG  228 (381)
T ss_pred             cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhc
Confidence            478899999988676666544 33688999999988776521 111122 379999999999999999999999998876


Q ss_pred             hhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHH
Q psy15555        319 SEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMA  398 (488)
Q Consensus       319 ~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a  398 (488)
                           +++.+.++|.++..     .+.+.+..++.+..+++.+.|.++.+++..+++.||+++.||..|++|.+++|||+
T Consensus       229 -----~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a  298 (381)
T COG0438         229 -----PDIKLVIVGDGPER-----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMA  298 (381)
T ss_pred             -----CCeEEEEEcCCCcc-----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHh
Confidence                 55899999998642     24566677777777889999999878899999999999999988999999999999


Q ss_pred             cCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHH
Q psy15555        399 AGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLT  475 (488)
Q Consensus       399 ~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~  475 (488)
                      +|+|||+++.++.. +++.++    .+|+++.  +.+++++++..+++ +++.++.+++.+++.+ +.|+|+...+++.+
T Consensus       299 ~g~pvi~~~~~~~~-e~~~~~----~~g~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (381)
T COG0438         299 AGTPVIASDVGGIP-EVVEDG----ETGLLVPPGDVEELADALEQLLE-DPELREELGEAARERVEEEFSWERIAEQLLE  372 (381)
T ss_pred             cCCcEEECCCCChH-HHhcCC----CceEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            99999999999776 888776    4577655  58999999999999 7788888888666666 89999999999999


Q ss_pred             HHHHhhh
Q psy15555        476 FTQPLFK  482 (488)
Q Consensus       476 ~~~~~~~  482 (488)
                      ++.....
T Consensus       373 ~~~~~~~  379 (381)
T COG0438         373 LYEELLA  379 (381)
T ss_pred             HHHHHHh
Confidence            9887654

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.80  E-value=4.5e-18  Score=168.58  Aligned_cols=216  Identities=13%  Similarity=0.137  Sum_probs=176.3

Q ss_pred             hcccCEEEEcChhHHHHHHHHhccC---CceEEEcCCCCchhhhccCCCCCCCCeEEEEee--ccCCCCChHHHHHHHHH
Q psy15555        239 GKYSDIIMVNSSWTEEHVIQLWNCQ---LKTYKLYPPCDTEDLKKITHSKTDGPVKIISVA--QFRPEKDHPLQLRAMYQ  313 (488)
Q Consensus       239 ~~~~d~ii~~s~~~~~~~~~~~~~~---~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g--~~~~~k~~~~ll~a~~~  313 (488)
                      +..+|.+|+.|+..++.+.+.++..   .++..||++ +.... ..  .....+..+++++  |+ ++|.++.+++|+.+
T Consensus       270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~-~~~~~-~~--~s~r~~~~~I~v~idrL-~ek~~~~~I~av~~  344 (519)
T TIGR03713       270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPF-DTRLR-LG--QSQQLYETEIGFWIDGL-SDEELQQILQQLLQ  344 (519)
T ss_pred             hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCcc-ceEEe-cC--hhhcccceEEEEEcCCC-ChHHHHHHHHHHHH
Confidence            4567999999988777777665522   245566654 33222 11  1112344677778  99 99999999999999


Q ss_pred             hHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-----------------------------CcEEEecC
Q psy15555        314 LRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-----------------------------NNVEFKVN  364 (488)
Q Consensus       314 l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-----------------------------~~v~~~g~  364 (488)
                      +.++.     |+++|.+.|.+...   +..+.+++.++++++.                             +.|.+.|.
T Consensus       345 ~~~~~-----p~~~L~~~gy~~~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy  416 (519)
T TIGR03713       345 YILKN-----PDYELKILTYNNDN---DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL  416 (519)
T ss_pred             HHhhC-----CCeEEEEEEecCch---hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec
Confidence            99988     99999999988532   3456676776666555                             68999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHc
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILH  444 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~  444 (488)
                      .+..++.+.|..+.++|.+|..|+++ +.+||++.|+|+|   ..|+. +++.++    .||++++|.++|++++..++.
T Consensus       417 ~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~-~~V~d~----~NG~li~d~~~l~~al~~~L~  487 (519)
T TIGR03713       417 TNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET-DYVEHN----KNGYIIDDISELLKALDYYLD  487 (519)
T ss_pred             CCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCc-eeeEcC----CCcEEeCCHHHHHHHHHHHHh
Confidence            87679999999999999999999999 9999999999999   44455 999999    999999999999999999999


Q ss_pred             cCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        445 LSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       445 ~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                       +++...++...+.+.+++||.+.+.++|.+++
T Consensus       488 -~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~  519 (519)
T TIGR03713       488 -NLKNWNYSLAYSIKLIDDYSSENIIERLNELI  519 (519)
T ss_pred             -CHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence             99999999999999999999999999998753

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.76  E-value=2.6e-16  Score=152.43  Aligned_cols=266  Identities=15%  Similarity=0.054  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhh--hhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccc
Q psy15555        138 FTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPL--FSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVA  215 (488)
Q Consensus       138 ~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~--~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~  215 (488)
                      +......+.....+.+.+++.+||+++.+....+.+.+  .....++|++.++ .|.. |                    
T Consensus        68 l~~~~~~~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~-w--------------------  125 (385)
T TIGR00215        68 LGRLGRLLKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQV-W--------------------  125 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcH-h--------------------
Confidence            33444455556678889999999999877643323223  3335688988655 2321 1                    


Q ss_pred             cCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhh--ccC------CCCCC
Q psy15555        216 NNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLK--KIT------HSKTD  287 (488)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~--~~~------~~~~~  287 (488)
                        ......           .+.+.+.+|.+++.++..++.+.+. +.  +..+++||+......  +..      -..++
T Consensus       126 --aw~~~~-----------~r~l~~~~d~v~~~~~~e~~~~~~~-g~--~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~  189 (385)
T TIGR00215       126 --AWRKWR-----------AKKIEKATDFLLAILPFEKAFYQKK-NV--PCRFVGHPLLDAIPLYKPDRKSAREKLGIDH  189 (385)
T ss_pred             --hcCcch-----------HHHHHHHHhHhhccCCCcHHHHHhc-CC--CEEEECCchhhhccccCCCHHHHHHHcCCCC
Confidence              111110           1123456899999999999888763 32  467788886322111  100      11233


Q ss_pred             CCeEEEEe-e-ccCC-CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        288 GPVKIISV-A-QFRP-EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       288 ~~~~i~~~-g-~~~~-~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ++++++.. | |... .|....+++|++.+.+..     |++++++++.+.     ...+.+++..+.++....+.+.+ 
T Consensus       190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~-----p~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~-  258 (385)
T TIGR00215       190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQE-----PDLRRVLPVVNF-----KRRLQFEQIKAEYGPDLQLHLID-  258 (385)
T ss_pred             CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhC-----CCeEEEEEeCCc-----hhHHHHHHHHHHhCCCCcEEEEC-
Confidence            45555544 3 4443 578889999999998877     788887765442     11245555555655544565543 


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----------------ceeccCCCccccce-
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----------------DIVIEDPETCRNGF-  427 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----------------eiv~~~~~~~~~g~-  427 (488)
                         +++..+|+.||++|.+|     |.+.+|+|++|+|+|......+..                .++.+.    +..- 
T Consensus       259 ---~~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~----~~~pe  326 (385)
T TIGR00215       259 ---GDARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR----LLVPE  326 (385)
T ss_pred             ---chHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC----ccchh
Confidence               25668999999999998     777789999999999973221110                112221    1111 


Q ss_pred             ec--C-CHHHHHHHHHHHHccCH----HHHHHHHHHHHHHHhhcC
Q psy15555        428 LA--C-DEVEYAQTIKLILHLSQ----DTKTRISQNAVSSVDRFS  465 (488)
Q Consensus       428 ~~--~-~~~~l~~~i~~ll~~~~----~~~~~~~~~a~~~~~~~s  465 (488)
                      +.  + +++.+++.+.+++. |+    +.++++.+.-.+..+...
T Consensus       327 l~q~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~l~  370 (385)
T TIGR00215       327 LLQEECTPHPLAIALLLLLE-NGLKAYKEMHRERQFFEELRQRIY  370 (385)
T ss_pred             hcCCCCCHHHHHHHHHHHhc-CCcccHHHHHHHHHHHHHHHHHhc
Confidence            11  1 78999999999999 88    888888777665544443

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=3.4e-15  Score=140.63  Aligned_cols=326  Identities=11%  Similarity=0.061  Sum_probs=203.1

Q ss_pred             CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHH
Q psy15555         64 AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQ  143 (488)
Q Consensus        64 ~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      .+||--..+..++++|.+++++ ++.+..+. ........+.          .. +.+..++.........+..+.....
T Consensus         9 GTGGHv~pAlAl~~~l~~~g~~-~v~~~~~~-~~~e~~l~~~----------~~-~~~~~I~~~~~~~~~~~~~~~~~~~   75 (357)
T COG0707           9 GTGGHVFPALALAEELAKRGWE-QVIVLGTG-DGLEAFLVKQ----------YG-IEFELIPSGGLRRKGSLKLLKAPFK   75 (357)
T ss_pred             CCccchhHHHHHHHHHHhhCcc-EEEEeccc-ccceeeeccc----------cC-ceEEEEecccccccCcHHHHHHHHH
Confidence            3445557788899999999766 55554333 2222111111          12 5566666665655555555555556


Q ss_pred             HHHHHHHHHHHhhhcCCcEEEecCCccchhhhh-hhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchh
Q psy15555        144 SIGSMILGVEALLSFQPDIYIDTMGYAFTYPLF-SYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTS  222 (488)
Q Consensus       144 ~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~-~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      .+......++.+++++||+|+.+.+++...+.. ++..++|++.+-..                           ...+.
T Consensus        76 ~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn---------------------------~~~G~  128 (357)
T COG0707          76 LLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQN---------------------------AVPGL  128 (357)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecC---------------------------CCcch
Confidence            666778888999999999999998887765533 33557777663321                           11221


Q ss_pred             hhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhh-ccCC---CCCCCCeEEEEeecc
Q psy15555        223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLK-KITH---SKTDGPVKIISVAQF  298 (488)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~-~~~~---~~~~~~~~i~~~g~~  298 (488)
                      ..+           ...+.++.|.+.-+.     ...+..++++.++.+|+..+... +...   ....++++++.+|..
T Consensus       129 ank-----------~~~~~a~~V~~~f~~-----~~~~~~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~~~~~~ilV~GGS  192 (357)
T COG0707         129 ANK-----------ILSKFAKKVASAFPK-----LEAGVKPENVVVTGIPVRPEFEELPAAEVRKDGRLDKKTILVTGGS  192 (357)
T ss_pred             hHH-----------HhHHhhceeeecccc-----ccccCCCCceEEecCcccHHhhccchhhhhhhccCCCcEEEEECCc
Confidence            111           122345666655443     23344445789999999877664 1111   111256677666655


Q ss_pred             CCCCChHHHHHHHHHhHHhhhhhccC-ceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC
Q psy15555        299 RPEKDHPLQLRAMYQLRQIISEELWD-NLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG  377 (488)
Q Consensus       299 ~~~k~~~~ll~a~~~l~~~~~~~~~~-~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a  377 (488)
                      ..-+.   +-+++..+....     . +++++...+..     . .+++++...+++.   +...++.  ++|..+|+.|
T Consensus       193 ~Ga~~---ln~~v~~~~~~l-----~~~~~v~~~~G~~-----~-~~~~~~~~~~~~~---~~v~~f~--~dm~~~~~~A  253 (357)
T COG0707         193 QGAKA---LNDLVPEALAKL-----ANRIQVIHQTGKN-----D-LEELKSAYNELGV---VRVLPFI--DDMAALLAAA  253 (357)
T ss_pred             chhHH---HHHHHHHHHHHh-----hhCeEEEEEcCcc-----h-HHHHHHHHhhcCc---EEEeeHH--hhHHHHHHhc
Confidence            43333   334444443333     2 35555544331     2 3666666666654   8888998  8999999999


Q ss_pred             cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---c----ceeccCCCccccceecC----CHHHHHHHHHHHHccC
Q psy15555        378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---M----DIVIEDPETCRNGFLAC----DEVEYAQTIKLILHLS  446 (488)
Q Consensus       378 d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~----eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll~~~  446 (488)
                      |++|.-    .++.++.|.+++|+|+|.-+.+.-.   +    ..+++.    +.|.+++    +++++.+.|.++++ +
T Consensus       254 DLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~----gaa~~i~~~~lt~~~l~~~i~~l~~-~  324 (357)
T COG0707         254 DLVISR----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA----GAALVIRQSELTPEKLAELILRLLS-N  324 (357)
T ss_pred             cEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC----CCEEEeccccCCHHHHHHHHHHHhc-C
Confidence            998864    4578999999999999998774331   0    233333    5677765    47799999999999 9


Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy15555        447 QDTKTRISQNAVSSVDRFSMEEFKNGF  473 (488)
Q Consensus       447 ~~~~~~~~~~a~~~~~~~s~~~~~~~~  473 (488)
                      ++..++|.+++++....-+.+.+++..
T Consensus       325 ~~~l~~m~~~a~~~~~p~aa~~i~~~~  351 (357)
T COG0707         325 PEKLKAMAENAKKLGKPDAAERIADLL  351 (357)
T ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            999999999997665443344444433

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.69  E-value=7e-17  Score=133.02  Aligned_cols=130  Identities=31%  Similarity=0.433  Sum_probs=95.7

Q ss_pred             CeEEEEeeccCCCCChHHHHH-HHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        289 PVKIISVAQFRPEKDHPLQLR-AMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~-a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      -++++++|+..+.|+++.+++ ++.++.++.     |+++|+|+|.++        ++++++     ..++|+++|++  
T Consensus         2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~-----p~~~l~i~G~~~--------~~l~~~-----~~~~v~~~g~~--   61 (135)
T PF13692_consen    2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH-----PDIELIIIGNGP--------DELKRL-----RRPNVRFHGFV--   61 (135)
T ss_dssp             -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS-----TTEEEEEECESS---------HHCCH-----HHCTEEEE-S---
T ss_pred             cccccccccccccccccchhhhHHHHHHHHC-----cCEEEEEEeCCH--------HHHHHh-----cCCCEEEcCCH--
Confidence            468999999999999999999 999999988     899999999987        234443     13589999999  


Q ss_pred             HHHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee-cCCHHHHHHHHHHHHc
Q psy15555        368 EDMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL-ACDEVEYAQTIKLILH  444 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~-~~~~~~l~~~i~~ll~  444 (488)
                      +|+.++++.||+++.|+. .++++.+++|||++|+|||+++. +.. ++....    +.|.. .+|+++++++|.++++
T Consensus        62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-~~~~~~----~~~~~~~~~~~~l~~~i~~l~~  134 (135)
T PF13692_consen   62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAE-GIVEED----GCGVLVANDPEELAEAIERLLN  134 (135)
T ss_dssp             HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCH-CHS-------SEEEE-TT-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chh-hheeec----CCeEEECCCHHHHHHHHHHHhc
Confidence            799999999999999984 67889999999999999999998 443 555433    34544 4599999999999986

>TIGR03492 conserved hypothetical protein

Probab=99.65  E-value=4.2e-14  Score=137.07  Aligned_cols=355  Identities=15%  Similarity=0.127  Sum_probs=202.1

Q ss_pred             CceehHHHHHHHHHHhCCCeeEE---EEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHH
Q psy15555         67 GGERVLWTAVLALHQKYPDYKIY---IYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQ  143 (488)
Q Consensus        67 G~e~~~~~l~~~L~~~~~~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~  143 (488)
                      |+...+..++++|.++.++++|.   .+....+. ......    ..+        ++..++...+........+..+..
T Consensus         8 ged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~ip----~~g--------~~~~~~sgg~~~~~~~~~~~~~~~   74 (396)
T TIGR03492         8 GEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGIP----IIG--------PTKELPSGGFSYQSLRGLLRDLRA   74 (396)
T ss_pred             hHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCCc----eeC--------CCCCCCCCCccCCCHHHHHHHHHh
Confidence            57799999999999977788877   44433221 110000    000        122333334433444455555555


Q ss_pred             -HHHHHHHHHHHhhhc--CCcEEEecCCccchhhhhhhhCCCeeEE-EEeCCccchHHHHHHHhhhhcccCccccccCcc
Q psy15555        144 -SIGSMILGVEALLSF--QPDIYIDTMGYAFTYPLFSYIGGSKVAC-YIHYPTITKEMLTRVARRVITHNNSQRVANNPI  219 (488)
Q Consensus       144 -~~~~~~~~~~~l~~~--~pDiii~~~~~~~~~~~~~~~~~~~~v~-~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~  219 (488)
                       .+...+..++.++++  +||+|+.+.++..  -++.+..++|.++ -.|.....|.             ..........
T Consensus        75 gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~--~~aA~~~~~p~~~~~~~esn~~~~-------------~~~~~~~~~~  139 (396)
T TIGR03492        75 GLVGLTLGQWRALRKWAKKGDLIVAVGDIVP--LLFAWLSGKPYAFVGTAKSDYYWE-------------SGPRRSPSDE  139 (396)
T ss_pred             hHHHHHHHHHHHHHHHhhcCCEEEEECcHHH--HHHHHHcCCCceEEEeeccceeec-------------CCCCCccchh
Confidence             666777788889999  9999998887662  2334577888766 3454332210             0000000000


Q ss_pred             chhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccC
Q psy15555        220 LTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFR  299 (488)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~  299 (488)
                      ...+....+..| ...+...+.||.+.+..+..++.+.+. +.  ++.+++||+-............++.++++..+...
T Consensus       140 ~~~~~G~~~~p~-e~n~l~~~~a~~v~~~~~~t~~~l~~~-g~--k~~~vGnPv~d~l~~~~~~~l~~~~~~lllLpGSR  215 (396)
T TIGR03492       140 YHRLEGSLYLPW-ERWLMRSRRCLAVFVRDRLTARDLRRQ-GV--RASYLGNPMMDGLEPPERKPLLTGRFRIALLPGSR  215 (396)
T ss_pred             hhccCCCccCHH-HHHHhhchhhCEEeCCCHHHHHHHHHC-CC--eEEEeCcCHHhcCccccccccCCCCCEEEEECCCC
Confidence            000000011111 112334478999999999999988873 32  68999999532222111112223334444444333


Q ss_pred             -C--CCChHHHHHHHHHhHHhhhhhccCceEEEEEe-cCCCCCcHHHHHHHHHHHHhcCCC--------------CcEEE
Q psy15555        300 -P--EKDHPLQLRAMYQLRQIISEELWDNLKLIFIG-STRNEEDEVCVKDMQDLCKHLSLE--------------NNVEF  361 (488)
Q Consensus       300 -~--~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG-~~~~~~~~~~~~~l~~~~~~~~l~--------------~~v~~  361 (488)
                       .  ..+...+++++..+.++      +++.+++.- ...+      .+++++..++.++.              +++.+
T Consensus       216 ~ae~~~~lp~~l~al~~L~~~------~~~~~v~~~~~~~~------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v  283 (396)
T TIGR03492       216 PPEAYRNLKLLLRALEALPDS------QPFVFLAAIVPSLS------LEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEV  283 (396)
T ss_pred             HHHHHccHHHHHHHHHHHhhC------CCeEEEEEeCCCCC------HHHHHHHHHhcCceecCCccccchhhccCceEE
Confidence             2  35667889999888643      466666543 2221      25566666554543              23566


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc--ceeccC-CCccccceecC-CHHHHHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM--DIVIED-PETCRNGFLAC-DEVEYAQ  437 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~--eiv~~~-~~~~~~g~~~~-~~~~l~~  437 (488)
                      ..+.  +++..+|+.||++|..|     |.+..|++++|+|+|..+..+...  .+.+.. ........+.+ +++.+++
T Consensus       284 ~~~~--~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~  356 (396)
T TIGR03492       284 LLGR--GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQ  356 (396)
T ss_pred             Eech--HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHH
Confidence            6655  78999999999999876     556699999999999987543310  111110 00002223334 7899999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGF  473 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~  473 (488)
                      ++.++++ |++.+++|.+++++.. +....+++++.+
T Consensus       357 ~l~~ll~-d~~~~~~~~~~~~~~lg~~~a~~~ia~~i  392 (396)
T TIGR03492       357 VVRQLLA-DPELLERCRRNGQERMGPPGASARIAESI  392 (396)
T ss_pred             HHHHHHc-CHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence            9999999 9999888886555444 444444444433

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.61  E-value=6.1e-13  Score=130.16  Aligned_cols=290  Identities=13%  Similarity=0.155  Sum_probs=170.1

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++.+..+|| +|..+.....++|.. + .....++.+++|.|+...++...++.                   .    ..
T Consensus       134 ~i~~~~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~-------------------r----~e  190 (474)
T PF00982_consen  134 AIAEVYRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPW-------------------R----EE  190 (474)
T ss_dssp             HHGGG--TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTT-------------------H----HH
T ss_pred             HHHHhCcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCc-------------------H----HH
Confidence            344555666 655555445555533 2 24578899999999876655432211                   1    11


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHh----cc--------------CCceEEEcCCCCchhhhccCC--------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLW----NC--------------QLKTYKLYPPCDTEDLKKITH--------  283 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~~--------------~~k~~vi~~~~d~~~~~~~~~--------  283 (488)
                      ++     ..+-.+|.|-+++...++.|....    +.              ..++.+.|-|+|++.+.....        
T Consensus       191 iL-----~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~  265 (474)
T PF00982_consen  191 IL-----RGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERA  265 (474)
T ss_dssp             HH-----HHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHH
T ss_pred             HH-----HHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHH
Confidence            11     133568999999999999986532    11              013667778899887754321        


Q ss_pred             -----CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcH---HHHHHHHHHHHh---
Q psy15555        284 -----SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDE---VCVKDMQDLCKH---  352 (488)
Q Consensus       284 -----~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~---~~~~~l~~~~~~---  352 (488)
                           ...++..+++.+.|++..||+..=+.|+.++.+++|+ ...++.|+-++-......+   +..+++.+++.+   
T Consensus       266 ~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~-~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~  344 (474)
T PF00982_consen  266 EELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPE-YRGKVVLIQIAVPSREDVPEYQELRREVEELVGRING  344 (474)
T ss_dssp             HHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GG-GTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcC-ccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHh
Confidence                 1223358999999999999999999999999999842 1234666655543222222   334455554443   


Q ss_pred             -cCCC--CcEEE-ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCc----EEEeCCCCCccceeccCCCccc
Q psy15555        353 -LSLE--NNVEF-KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI----MIAHKSGGPKMDIVIEDPETCR  424 (488)
Q Consensus       353 -~~l~--~~v~~-~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~P----vI~~~~~~~~~eiv~~~~~~~~  424 (488)
                       +|-.  ..|.+ .+.++.+++..+|+.||+++.+|..+|..++..|+.+|-.+    +|.|...|.. +.+.++     
T Consensus       345 ~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa-~~L~~~-----  418 (474)
T PF00982_consen  345 KYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA-EQLSEA-----  418 (474)
T ss_dssp             HH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG-GT-TTS-----
T ss_pred             hcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH-HHcCCc-----
Confidence             2311  12444 45689999999999999999999999999999999999655    6778887776 555432     


Q ss_pred             cceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        425 NGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       425 ~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                       +++++  |.++++++|.+.++|+++++++.-+..++.+..++....++.+++-++
T Consensus       419 -al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~  473 (474)
T PF00982_consen  419 -ALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLK  473 (474)
T ss_dssp             --EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
T ss_pred             -cEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhh
Confidence             46666  999999999999998999999988888999999999999999887765

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.60  E-value=8.6e-13  Score=127.28  Aligned_cols=291  Identities=11%  Similarity=0.136  Sum_probs=202.1

Q ss_pred             HHhhhcCCc-EEEecCCccchhhh-hh-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPL-FS-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~-~~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      +..+..+|| +|..+......+|. ++ .....++.+++|+|+.+.++...++.+                       ..
T Consensus       116 ~v~~~~~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r-----------------------~e  172 (474)
T PRK10117        116 KLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPH-----------------------DE  172 (474)
T ss_pred             HHHHhcCCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCCh-----------------------HH
Confidence            444555665 66555544444442 22 234678999999999877664422221                       11


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-----------------cCCceEEEcCCCCchhhhccCCC--------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-----------------CQLKTYKLYPPCDTEDLKKITHS--------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-----------------~~~k~~vi~~~~d~~~~~~~~~~--------  284 (488)
                      ++.     .+-.+|.|-+++...++.|.+...                 ...++.+.|-++|++.+......        
T Consensus       173 il~-----glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~  247 (474)
T PRK10117        173 LLE-----QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ  247 (474)
T ss_pred             HHH-----HHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHH
Confidence            111     234579999999999988876221                 01146667778998877543210        


Q ss_pred             ---CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCc----HHHHHHHHHHHHhc----
Q psy15555        285 ---KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEED----EVCVKDMQDLCKHL----  353 (488)
Q Consensus       285 ---~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~----~~~~~~l~~~~~~~----  353 (488)
                         ...++.+|+-+.|++.-||+..=++|+.++.+++|+- ..++.|+-+.- |...+    .+...++++++.+-    
T Consensus       248 lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~-~gkvvlvQia~-psR~~v~~Y~~l~~~v~~~vg~INg~f  325 (474)
T PRK10117        248 LKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH-HGKIRYTQIAP-TSRGDVQAYQDIRHQLETEAGRINGKY  325 (474)
T ss_pred             HHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhh-cCCEEEEEEcC-CCCCccHHHHHHHHHHHHHHHHHHhcc
Confidence               1235778999999999999999999999999887421 12455664542 22222    22334444444432    


Q ss_pred             CCC--CcEEEe-cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-----cEEEeCCCCCccceeccCCCcccc
Q psy15555        354 SLE--NNVEFK-VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-----IMIAHKSGGPKMDIVIEDPETCRN  425 (488)
Q Consensus       354 ~l~--~~v~~~-g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-----PvI~~~~~~~~~eiv~~~~~~~~~  425 (488)
                      |-.  ..|.++ ..++.+++..+|+.||+.+.+|..+|+.++..|+.+|-.     +.|.|...|.. +.+.       .
T Consensus       326 g~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA-~~L~-------~  397 (474)
T PRK10117        326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT-------S  397 (474)
T ss_pred             CCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchH-HHhC-------C
Confidence            211  124444 567999999999999999999999999999999999965     37778887776 4442       2


Q ss_pred             ceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        426 GFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       426 g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                      +++++  |.++++++|.+.++|+++++++..+..++.+..++....++.+++-+..+-
T Consensus       398 AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~  455 (474)
T PRK10117        398 ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV  455 (474)
T ss_pred             CeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence            56666  999999999999999999999988888898999999999999998887764

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.59  E-value=2.4e-13  Score=131.60  Aligned_cols=250  Identities=14%  Similarity=0.143  Sum_probs=151.8

Q ss_pred             HHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----------C--------------C-CC
Q psy15555        233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----------S--------------K-TD  287 (488)
Q Consensus       233 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----------~--------------~-~~  287 (488)
                      .+++.+...||++.++|+-++.....+.+.... .|+|||++.+.+....+          +              . .+
T Consensus       213 ~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d  291 (633)
T PF05693_consen  213 SIERAAAHYADVFTTVSEITAKEAEHLLKRKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLD  291 (633)
T ss_dssp             HHHHHHHHHSSEEEESSHHHHHHHHHHHSS--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GG
T ss_pred             HHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCcc
Confidence            367788899999999999999999987775433 58899998776544321          0              1 13


Q ss_pred             CCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhh--ccCceEEEEEecCCCCCcHH------HHHHHHHHHH-------
Q psy15555        288 GPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEE--LWDNLKLIFIGSTRNEEDEV------CVKDMQDLCK-------  351 (488)
Q Consensus       288 ~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~--~~~~~~l~ivG~~~~~~~~~------~~~~l~~~~~-------  351 (488)
                      +..++...||.+ ..||++.+|+|+.+|.......  ...=+-|+|++.....-+.+      ..+++++-+.       
T Consensus       292 ~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g  371 (633)
T PF05693_consen  292 KTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIG  371 (633)
T ss_dssp             GEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            456777788888 6799999999999997542110  01124577777653222111      1111111111       


Q ss_pred             --------hcCCC--------------------------------------------------------Cc--EEEecC-
Q psy15555        352 --------HLSLE--------------------------------------------------------NN--VEFKVN-  364 (488)
Q Consensus       352 --------~~~l~--------------------------------------------------------~~--v~~~g~-  364 (488)
                              .-.++                                                        ++  |+|++. 
T Consensus       372 ~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~y  451 (633)
T PF05693_consen  372 KRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEY  451 (633)
T ss_dssp             HHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S-
T ss_pred             HHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeecc
Confidence                    00111                                                        22  445432 


Q ss_pred             CC------hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccC-CCcccccee-cC----C-
Q psy15555        365 LP------YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIED-PETCRNGFL-AC----D-  431 (488)
Q Consensus       365 ~~------~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~-~~~~~~g~~-~~----~-  431 (488)
                      ++      .-+..+++..||+.|+||.+|++|.+++|+.++|+|.|+++..|.. ..+.+. +.....|+. ++    + 
T Consensus       452 L~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG-~~~~~~~~~~~~~GV~VvdR~~~n~  530 (633)
T PF05693_consen  452 LSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFG-CWMQEHIEDPEEYGVYVVDRRDKNY  530 (633)
T ss_dssp             --TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHH-HHHHTTS-HHGGGTEEEE-SSSS-H
T ss_pred             ccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHH-HHHHHhhccCcCCcEEEEeCCCCCH
Confidence            11      2378899999999999999999999999999999999999997654 222221 000134554 33    3 


Q ss_pred             ---HHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        432 ---EVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       432 ---~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                         .+++++.|.++..+++..+..+.+++.+.++..+|+.+...|.+.++-++++.
T Consensus       531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~a  586 (633)
T PF05693_consen  531 DESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRRA  586 (633)
T ss_dssp             HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc
Confidence               56677778888877888899999999888899999999999999998777643

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.56  E-value=3.5e-12  Score=121.92  Aligned_cols=321  Identities=9%  Similarity=0.030  Sum_probs=176.3

Q ss_pred             CCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHH
Q psy15555         63 NAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLG  142 (488)
Q Consensus        63 ~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  142 (488)
                      +.+||--.-+..++++|.++  +++|.++++..+. ..+..+.          .. +.+..++.........+..+....
T Consensus         9 GGTGGHi~Pala~a~~l~~~--g~~v~~vg~~~~~-e~~l~~~----------~g-~~~~~~~~~~l~~~~~~~~~~~~~   74 (352)
T PRK12446          9 GGSAGHVTPNLAIIPYLKED--NWDISYIGSHQGI-EKTIIEK----------EN-IPYYSISSGKLRRYFDLKNIKDPF   74 (352)
T ss_pred             CCcHHHHHHHHHHHHHHHhC--CCEEEEEECCCcc-ccccCcc----------cC-CcEEEEeccCcCCCchHHHHHHHH
Confidence            33444446688899999986  6777777765332 1111111          11 334444322221122233344444


Q ss_pred             HHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccch
Q psy15555        143 QSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILT  221 (488)
Q Consensus       143 ~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  221 (488)
                      ..+.......+++++++||+|+.+.++..... ++....++|++++-.                           |...+
T Consensus        75 ~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~---------------------------n~~~g  127 (352)
T PRK12446         75 LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHES---------------------------DMTPG  127 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECC---------------------------CCCcc
Confidence            44555666778899999999998876664322 334467888866322                           11111


Q ss_pred             hhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC----C--CCCCCCeEEEEe
Q psy15555        222 SFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT----H--SKTDGPVKIISV  295 (488)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~----~--~~~~~~~~i~~~  295 (488)
                      ..           .+.+.+.++.+.+.-+...+.+    + .+++.++++|+..+......    .  ...+++++++.+
T Consensus       128 ~~-----------nr~~~~~a~~v~~~f~~~~~~~----~-~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~  191 (352)
T PRK12446        128 LA-----------NKIALRFASKIFVTFEEAAKHL----P-KEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIM  191 (352)
T ss_pred             HH-----------HHHHHHhhCEEEEEccchhhhC----C-CCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEE
Confidence            11           1123455687776654433222    2 34788999998754432111    0  122445666666


Q ss_pred             eccCCCCChHH-HHHHHHHhHHhhhhhccCceEEEE-EecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHH
Q psy15555        296 AQFRPEKDHPL-QLRAMYQLRQIISEELWDNLKLIF-IGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKE  373 (488)
Q Consensus       296 g~~~~~k~~~~-ll~a~~~l~~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~  373 (488)
                      |....-+.+.. +.+++..+.        .++++++ +|..      + .++..   ...   .++...+++ .+++..+
T Consensus       192 GGS~Ga~~in~~~~~~l~~l~--------~~~~vv~~~G~~------~-~~~~~---~~~---~~~~~~~f~-~~~m~~~  249 (352)
T PRK12446        192 GGSLGAKKINETVREALPELL--------LKYQIVHLCGKG------N-LDDSL---QNK---EGYRQFEYV-HGELPDI  249 (352)
T ss_pred             CCccchHHHHHHHHHHHHhhc--------cCcEEEEEeCCc------h-HHHHH---hhc---CCcEEecch-hhhHHHH
Confidence            65544444433 233333332        2455544 4532      1 12211   111   133445664 2579999


Q ss_pred             HHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC-C---cc----ceeccCCCccccceecC----CHHHHHHHHHH
Q psy15555        374 FSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG-P---KM----DIVIEDPETCRNGFLAC----DEVEYAQTIKL  441 (488)
Q Consensus       374 ~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~-~---~~----eiv~~~~~~~~~g~~~~----~~~~l~~~i~~  441 (488)
                      |+.||++|.-    +++.++.|++++|+|.|..+... .   .+    +.+.+.    +.+....    +++.+.+++.+
T Consensus       250 ~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~----g~~~~l~~~~~~~~~l~~~l~~  321 (352)
T PRK12446        250 LAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQ----GYASVLYEEDVTVNSLIKHVEE  321 (352)
T ss_pred             HHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHC----CCEEEcchhcCCHHHHHHHHHH
Confidence            9999988863    45789999999999999986531 1   01    123333    4555543    68899999999


Q ss_pred             HHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +++ |++.+++   ++    +.+.....++++.+.+.
T Consensus       322 ll~-~~~~~~~---~~----~~~~~~~aa~~i~~~i~  350 (352)
T PRK12446        322 LSH-NNEKYKT---AL----KKYNGKEAIQTIIDHIS  350 (352)
T ss_pred             HHc-CHHHHHH---HH----HHcCCCCHHHHHHHHHH
Confidence            998 7766542   22    23344455555555543

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.54  E-value=7.4e-12  Score=126.08  Aligned_cols=184  Identities=14%  Similarity=0.164  Sum_probs=139.8

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC--CcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE--EDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~--~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ++.+.+++++|+...|+.++++.++.++.+-..+. ..++++++.|.+...  ...++.+.+.+++++...+++|.|+..
T Consensus       387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~-~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~  465 (601)
T TIGR02094       387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNP-ERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLEN  465 (601)
T ss_pred             CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCC-CCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcC
Confidence            35568999999999999999999988887421000 026899999987422  122355667777766445678999887


Q ss_pred             CChHHHHHHHHhCcEEEE-cCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC------------
Q psy15555        365 LPYEDMKKEFSEGLIGLH-AMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC------------  430 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~-~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~------------  430 (488)
                      .+..--..+++.||++++ ||. .|..|++-+=||..|.+.+++-.|... |.. ++    .+||.+.            
T Consensus       466 Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~-E~~-~~----~nGf~f~~~~~~~~~~~~d  539 (601)
T TIGR02094       466 YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWG-EGY-DG----DNGWAIGDGEEYDDEEEQD  539 (601)
T ss_pred             CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccc-ccC-CC----CcEEEECCCcccccccccc
Confidence            777777789999999999 888 999999999999999999999877665 544 34    6888764            


Q ss_pred             --CHHHHHHHHHHHH----ccC-----HHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHH
Q psy15555        431 --DEVEYAQTIKLIL----HLS-----QDTKTRISQNAVSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       431 --~~~~l~~~i~~ll----~~~-----~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~  477 (488)
                        |+++|.++|++.+    ..+     |+...++.++|.+.. ..|||++++++|.+.|
T Consensus       540 ~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       540 RLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF  598 (601)
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence              5778888886544    213     445788888888765 7899999999998875

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=99.54  E-value=3.6e-14  Score=121.52  Aligned_cols=157  Identities=18%  Similarity=0.177  Sum_probs=90.5

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      +..|+|....   |+...+.+|+++|.+++|++.+++++.++++  .+...   ..+    .+. +.+.++|.|..    
T Consensus        22 ~~iWiHa~Sv---GE~~a~~~Li~~l~~~~p~~~illT~~T~tg--~~~~~---~~~----~~~-v~~~~~P~D~~----   84 (186)
T PF04413_consen   22 PLIWIHAASV---GEVNAARPLIKRLRKQRPDLRILLTTTTPTG--REMAR---KLL----PDR-VDVQYLPLDFP----   84 (186)
T ss_dssp             T-EEEE-SSH---HHHHHHHHHHHHHTT---TS-EEEEES-CCH--HHHHH---GG-----GGG--SEEE---SSH----
T ss_pred             CcEEEEECCH---HHHHHHHHHHHHHHHhCCCCeEEEEecCCch--HHHHH---HhC----CCC-eEEEEeCccCH----
Confidence            6778886554   5779999999999999999999999998553  22222   122    123 66777888877    


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEE--EecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIY--IDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDii--i~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                                     ..+.+++++++||++  ++++.||+++..++ ..++|+++                         
T Consensus        85 ---------------~~~~rfl~~~~P~~~i~~EtElWPnll~~a~-~~~ip~~L-------------------------  123 (186)
T PF04413_consen   85 ---------------WAVRRFLDHWRPDLLIWVETELWPNLLREAK-RRGIPVVL-------------------------  123 (186)
T ss_dssp             ---------------HHHHHHHHHH--SEEEEES----HHHHHH------S-EEE-------------------------
T ss_pred             ---------------HHHHHHHHHhCCCEEEEEccccCHHHHHHHh-hcCCCEEE-------------------------
Confidence                           558899999999944  58999999998887 88999988                         


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP  272 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~  272 (488)
                          .|++.+..+...|+.+..+.+.+++..|.|+++|+.+++++.+++..++++.+.+|-
T Consensus       124 ----vNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gnl  180 (186)
T PF04413_consen  124 ----VNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTGNL  180 (186)
T ss_dssp             ----EEE--------------HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE---G
T ss_pred             ----EeeeeccccchhhhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeCcc
Confidence                677888888888888888999999999999999999999999988877789998875

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.53  E-value=3.4e-12  Score=123.82  Aligned_cols=192  Identities=8%  Similarity=0.073  Sum_probs=140.0

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhh
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIIS  319 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~  319 (488)
                      .+.|.||++++...+.+.+.++...++.++|-|+-.+   ....  ......++.++.       ...++++..+.++. 
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i~~---~~~~--~r~~~~~l~~t~-------s~~I~~i~~Lv~~l-  304 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYLYP---FKKD--NKYRKQALILTN-------SDQIEHLEEIVQAL-  304 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEEEe---eccc--cCCcccEEEECC-------HHHHHHHHHHHHhC-
Confidence            6679999999998888888887555667666664321   1111  122345566662       78899999999998 


Q ss_pred             hhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHc
Q psy15555        320 EELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAA  399 (488)
Q Consensus       320 ~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~  399 (488)
                          |+++|.| |.+.+     ..++|.++ +++  ++.+.+.|. ...++.++|..||+++..|..|+++.++.||+..
T Consensus       305 ----Pd~~f~I-ga~te-----~s~kL~~L-~~y--~nvvly~~~-~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~  370 (438)
T TIGR02919       305 ----PDYHFHI-AALTE-----MSSKLMSL-DKY--DNVKLYPNI-TTQKIQELYQTCDIYLDINHGNEILNAVRRAFEY  370 (438)
T ss_pred             ----CCcEEEE-EecCc-----ccHHHHHH-Hhc--CCcEEECCc-ChHHHHHHHHhccEEEEccccccHHHHHHHHHHc
Confidence                9999999 76653     12667777 554  444555554 4458999999999999999999999999999999


Q ss_pred             CCcEEEeCCC-CCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHH
Q psy15555        400 GLIMIAHKSG-GPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME  467 (488)
Q Consensus       400 G~PvI~~~~~-~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~  467 (488)
                      |+||++.+.. ++. +++.+       |.+++  ++++|+++|.+++. +++..++.-..-++.+..-+.+
T Consensus       371 G~pI~afd~t~~~~-~~i~~-------g~l~~~~~~~~m~~~i~~lL~-d~~~~~~~~~~q~~~a~~~~~~  432 (438)
T TIGR02919       371 NLLILGFEETAHNR-DFIAS-------ENIFEHNEVDQLISKLKDLLN-DPNQFRELLEQQREHANDISKE  432 (438)
T ss_pred             CCcEEEEecccCCc-ccccC-------CceecCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhccCCHH
Confidence            9999998884 443 66654       45544  99999999999999 8877666555555554444444

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.50  E-value=1.1e-10  Score=112.35  Aligned_cols=290  Identities=17%  Similarity=0.195  Sum_probs=201.8

Q ss_pred             HHhhhcCC-cEEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQP-DIYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~p-Diii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++.+..++ |+|..+.....++|.. + .....++.+++|.|+.+.++..++..+.                       .
T Consensus       140 ~i~~~~~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~-----------------------e  196 (486)
T COG0380         140 KIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWRE-----------------------E  196 (486)
T ss_pred             HHHHhcCCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHH-----------------------H
Confidence            34444454 4665555445555533 2 2346688899999998777765444321                       1


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc------------------CCceEEEcCCCCchhhhccCCC-------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC------------------QLKTYKLYPPCDTEDLKKITHS-------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~------------------~~k~~vi~~~~d~~~~~~~~~~-------  284 (488)
                      ++.     .+-.+|.|-++++..++.|.+....                  ..++..+|-++|+..+......       
T Consensus       197 Il~-----gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~  271 (486)
T COG0380         197 ILE-----GLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKV  271 (486)
T ss_pred             HHH-----HhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHH
Confidence            111     2346899999999999988764321                  1256667778898877654311       


Q ss_pred             ------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHH---HHHHHHHHHhc--
Q psy15555        285 ------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVC---VKDMQDLCKHL--  353 (488)
Q Consensus       285 ------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~---~~~l~~~~~~~--  353 (488)
                            ...++.+++.+.|++.-||+..=+.|+.++..++|+- ..++.++-+......+.++|   ..++++.+.+.  
T Consensus       272 ~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~-~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~  350 (486)
T COG0380         272 LELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEW-RGKVVLLQIAPPSREDVEEYQALRLQIEELVGRING  350 (486)
T ss_pred             HHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhh-hCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHh
Confidence                  2234788999999999999999999999999887321 12456665554443333333   23333333321  


Q ss_pred             --CCC--CcEEEe-cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHc----CCcEEEeCCCCCccceeccCCCccc
Q psy15555        354 --SLE--NNVEFK-VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAA----GLIMIAHKSGGPKMDIVIEDPETCR  424 (488)
Q Consensus       354 --~l~--~~v~~~-g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~----G~PvI~~~~~~~~~eiv~~~~~~~~  424 (488)
                        |-.  ..|.++ -.++.+++..+|+.||+++.+|..+|+.++..|+.+|    +=|.|-|...|.. ..+.       
T Consensus       351 ~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa-~~L~-------  422 (486)
T COG0380         351 EFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAA-SELR-------  422 (486)
T ss_pred             hcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccch-hhhc-------
Confidence              211  234444 4589999999999999999999999999999999998    3467777777765 3332       


Q ss_pred             cceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        425 NGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       425 ~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      ..++++  |.++++++|.+.++++++++++.-+...+.+..++...+++.+++-+..
T Consensus       423 ~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~  479 (486)
T COG0380         423 DALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ  479 (486)
T ss_pred             cCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            356766  9999999999999999999998888888888889999999998877765

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.47  E-value=3.3e-11  Score=126.09  Aligned_cols=292  Identities=13%  Similarity=0.108  Sum_probs=199.4

Q ss_pred             HHhhhcCC--cEEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHH
Q psy15555        153 EALLSFQP--DIYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYY  228 (488)
Q Consensus       153 ~~l~~~~p--Diii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (488)
                      +..+..+|  |+|..+.....++|.+ + .....++.+++|.|+.+.++...++-+                       .
T Consensus       193 ~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r-----------------------~  249 (854)
T PLN02205        193 RIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-----------------------E  249 (854)
T ss_pred             HHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcH-----------------------H
Confidence            33455567  5665555455555533 2 245678899999999777664322211                       1


Q ss_pred             HHHHHHHHHHhcccCEEEEcChhHHHHHHHHh----cc----------------CCceEEEcCCCCchhhhccCC-----
Q psy15555        229 KVFALLYSHVGKYSDIIMVNSSWTEEHVIQLW----NC----------------QLKTYKLYPPCDTEDLKKITH-----  283 (488)
Q Consensus       229 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~~----------------~~k~~vi~~~~d~~~~~~~~~-----  283 (488)
                      .++     ..+-.+|.|-+++...++.|.+..    +.                ..++.+.|-++|...+.....     
T Consensus       250 eiL-----~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~  324 (854)
T PLN02205        250 ELL-----RALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETE  324 (854)
T ss_pred             HHH-----HHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHH
Confidence            111     133468999999999999987721    11                114566777899887654321     


Q ss_pred             --------CCC-CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCC---CCcHHHHHHHHHHHH
Q psy15555        284 --------SKT-DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRN---EEDEVCVKDMQDLCK  351 (488)
Q Consensus       284 --------~~~-~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~---~~~~~~~~~l~~~~~  351 (488)
                              ... +++.+++-+.|++.-||+..=+.|+.++.+++|+- ..++.|+-+.....   .+..+...++.+++.
T Consensus       325 ~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~-~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~  403 (854)
T PLN02205        325 AKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEW-QGKVVLVQIANPARGKGKDVKEVQAETHSTVK  403 (854)
T ss_pred             HHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccc-cCCEEEEEEecCCCcccHHHHHHHHHHHHHHH
Confidence                    111 25789999999999999999999999999988321 11345554442211   112233344445544


Q ss_pred             hc----CCC--CcEEEe-cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-------------------cEEE
Q psy15555        352 HL----SLE--NNVEFK-VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-------------------IMIA  405 (488)
Q Consensus       352 ~~----~l~--~~v~~~-g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-------------------PvI~  405 (488)
                      +-    |-.  ..|+++ ..++.+|+..+|+.||+++.++..+|+.++..|+.+|..                   .+|.
T Consensus       404 rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiL  483 (854)
T PLN02205        404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVV  483 (854)
T ss_pred             HHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEe
Confidence            32    211  235555 568999999999999999999999999999999999853                   3566


Q ss_pred             eCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        406 HKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       406 ~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                      |...|...++ .       .+++++  |.++++++|.+.+.+++++++..-++.++++..++...+++.+++-++...
T Consensus       484 SEfaGaa~~L-~-------~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~  553 (854)
T PLN02205        484 SEFIGCSPSL-S-------GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC  553 (854)
T ss_pred             eeccchhHHh-C-------cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence            7676665333 2       256665  999999999999998888888888888888899999999999988887763

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.40  E-value=1.1e-12  Score=99.63  Aligned_cols=90  Identities=26%  Similarity=0.350  Sum_probs=82.1

Q ss_pred             EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy15555        380 GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVS  459 (488)
Q Consensus       380 ~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~  459 (488)
                      ++.++...+++..++|+||||+|+|+.+.++.. +++.++    ..++.++|++++.+++..+++ |++.+++++++|++
T Consensus         2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~-~~~~~~----~~~~~~~~~~el~~~i~~ll~-~~~~~~~ia~~a~~   75 (92)
T PF13524_consen    2 NLNPSRSDGPNMRIFEAMACGTPVISDDSPGLR-EIFEDG----EHIITYNDPEELAEKIEYLLE-NPEERRRIAKNARE   75 (92)
T ss_pred             EeeCCCCCCCchHHHHHHHCCCeEEECChHHHH-HHcCCC----CeEEEECCHHHHHHHHHHHHC-CHHHHHHHHHHHHH
Confidence            567888888999999999999999999988776 788877    778888999999999999999 99999999999999


Q ss_pred             HH-hhcCHHHHHHHHHH
Q psy15555        460 SV-DRFSMEEFKNGFLT  475 (488)
Q Consensus       460 ~~-~~~s~~~~~~~~~~  475 (488)
                      .+ ++|+|+..++++++
T Consensus        76 ~v~~~~t~~~~~~~il~   92 (92)
T PF13524_consen   76 RVLKRHTWEHRAEQILE   92 (92)
T ss_pred             HHHHhCCHHHHHHHHHC
Confidence            99 89999999998863

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.35  E-value=1.4e-09  Score=111.76  Aligned_cols=185  Identities=14%  Similarity=0.203  Sum_probs=137.8

Q ss_pred             CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCC-CCC-cHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR-NEE-DEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~-~~~-~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      .+.+++++|+...|+.++++..+.++.+-..+.. .+++++++|.+. ..+ ..+..+.+.+++++...+++|.|+...+
T Consensus       478 ~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~-~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd  556 (778)
T cd04299         478 VLTIGFARRFATYKRATLLLRDPERLKRLLNDPE-RPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYD  556 (778)
T ss_pred             ccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC-CCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCC
Confidence            3489999999999999999999888865221100 368999999763 221 2345556666666555667899998877


Q ss_pred             hHHHHHHHHhCcEEEEcCC--CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCC-------------
Q psy15555        367 YEDMKKEFSEGLIGLHAMW--NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACD-------------  431 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~--~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~-------------  431 (488)
                      ..--..+++.||+++++|.  .|..|.+=+=||..|.+-+++-.|... |-. ++    .+||.+.+             
T Consensus       557 ~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~-E~~-~g----~nGwaig~~~~~~~~~~~d~~  630 (778)
T cd04299         557 MALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWD-EGY-DG----ENGWAIGDGDEYEDDEYQDAE  630 (778)
T ss_pred             HHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccc-ccc-CC----CCceEeCCCccccChhhcchh
Confidence            7777889999999999998  999999999999999999999877665 554 45    68888742             


Q ss_pred             -HHHHHHHHHH----HHccC-----HHHHHHHHHHHHHHH-hhcCHHHHHHHHHH-HHHHh
Q psy15555        432 -EVEYAQTIKL----ILHLS-----QDTKTRISQNAVSSV-DRFSMEEFKNGFLT-FTQPL  480 (488)
Q Consensus       432 -~~~l~~~i~~----ll~~~-----~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~-~~~~~  480 (488)
                       .++|.+.|++    +.-..     |....+|.+++.+.. ..||+++++++|.+ +|..+
T Consensus       631 da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~  691 (778)
T cd04299         631 EAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPA  691 (778)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence             3445555543    22212     667888888888877 89999999999875 44443

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.33  E-value=1e-11  Score=107.12  Aligned_cols=175  Identities=19%  Similarity=0.151  Sum_probs=93.8

Q ss_pred             EEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccC
Q psy15555         55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASL  134 (488)
Q Consensus        55 I~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  134 (488)
                      |++++......||+|+++.+++++|.++  |+++.+++..........       .        .......  .......
T Consensus         1 ili~~~~~~~~GG~e~~~~~l~~~l~~~--G~~v~v~~~~~~~~~~~~-------~--------~~~~~~~--~~~~~~~   61 (177)
T PF13439_consen    1 ILITNIFLPNIGGAERVVLNLARALAKR--GHEVTVVSPGVKDPIEEE-------L--------VKIFVKI--PYPIRKR   61 (177)
T ss_dssp             -EEECC-TTSSSHHHHHHHHHHHHHHHT--T-EEEEEESS-TTS-SST-------E--------EEE---T--T-SSTSS
T ss_pred             CEEEEecCCCCChHHHHHHHHHHHHHHC--CCEEEEEEcCCCccchhh-------c--------cceeeee--ecccccc
Confidence            5677777888899999999999999999  556666665533221100       0        0000000  0000000


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcccc
Q psy15555        135 YPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRV  214 (488)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~  214 (488)
                            ....+.......+.+++.+||+||.+............. ++|++...|.+...    .   .           
T Consensus        62 ------~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~~~----~---~-----------  116 (177)
T PF13439_consen   62 ------FLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPYFE----R---R-----------  116 (177)
T ss_dssp             --------HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH------H---H-----------
T ss_pred             ------cchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhcc-CCCEEEEeCCCccc----c---c-----------
Confidence                  011122234566788888999998776444444444333 89999999954310    0   0           


Q ss_pred             ccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhcc-CCceEEEcCCCCchhh
Q psy15555        215 ANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNC-QLKTYKLYPPCDTEDL  278 (488)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~k~~vi~~~~d~~~~  278 (488)
                          ........+.......++...+.+|.++++|+.+++.+.+ ++. +.++.+|+||+|.+.|
T Consensus       117 ----~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F  176 (177)
T PF13439_consen  117 ----FLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRF  176 (177)
T ss_dssp             ----TTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH
T ss_pred             ----ccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHc
Confidence                0000111112222223444578999999999999999999 664 4699999999998876

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.31  E-value=9.4e-10  Score=101.72  Aligned_cols=261  Identities=15%  Similarity=0.069  Sum_probs=145.6

Q ss_pred             EEEEeccCCCCCC-CceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         54 TVAFFHPYCNAGG-GGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        54 rI~~~~~~~~~~g-G~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||+|........| |--..+..||++|.++  ++++++++.+......+....          .+ .++..++...-   
T Consensus         1 ~i~ir~Da~~~iG~GHv~Rcl~LA~~l~~~--g~~v~f~~~~~~~~~~~~i~~----------~g-~~v~~~~~~~~---   64 (279)
T TIGR03590         1 KILFRADASSEIGLGHVMRCLTLARALHAQ--GAEVAFACKPLPGDLIDLLLS----------AG-FPVYELPDESS---   64 (279)
T ss_pred             CEEEEecCCccccccHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHH----------cC-CeEEEecCCCc---
Confidence            5777766666555 5557789999999887  667777776643221111111          11 33333322110   


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCC-ccch-hhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMG-YAFT-YPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~-~~~~-~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                        +.         .-.....+.+++.+||+++..+. .... ...++ ..+.++++ +-...                  
T Consensus        65 --~~---------~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k-~~~~~l~~-iDD~~------------------  113 (279)
T TIGR03590        65 --RY---------DDALELINLLEEEKFDILIVDHYGLDADWEKLIK-EFGRKILV-IDDLA------------------  113 (279)
T ss_pred             --hh---------hhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHH-HhCCeEEE-EecCC------------------
Confidence              00         00112456777889998775542 1111 11222 23444443 22110                  


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHh-ccCCceEEEcC---CCCchhhhccCCCCC
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLW-NCQLKTYKLYP---PCDTEDLKKITHSKT  286 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~~k~~vi~~---~~d~~~~~~~~~~~~  286 (488)
                           .   .                  -..+|.++-.+.. .+...-.. ..+......++   ++..+.....+....
T Consensus       114 -----~---~------------------~~~~D~vin~~~~-~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~~~~~  166 (279)
T TIGR03590       114 -----D---R------------------PHDCDLLLDQNLG-ADASDYQGLVPANCRLLLGPSYALLREEFYQLATANKR  166 (279)
T ss_pred             -----C---C------------------CcCCCEEEeCCCC-cCHhHhcccCcCCCeEEecchHHhhhHHHHHhhHhhhc
Confidence                 0   0                  0146888888765 33222111 11223445555   343333222111111


Q ss_pred             --CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEE-EEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        287 --DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKL-IFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       287 --~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l-~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                        ..+.+++..|..++.+....+++++.++.        +++++ +++|.+.     ...+++++.++..   .++.+.+
T Consensus       167 ~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~--------~~~~i~vv~G~~~-----~~~~~l~~~~~~~---~~i~~~~  230 (279)
T TIGR03590       167 RKPLRRVLVSFGGADPDNLTLKLLSALAESQ--------INISITLVTGSSN-----PNLDELKKFAKEY---PNIILFI  230 (279)
T ss_pred             ccccCeEEEEeCCcCCcCHHHHHHHHHhccc--------cCceEEEEECCCC-----cCHHHHHHHHHhC---CCEEEEe
Confidence              23567888888887665567777776653        23333 3566553     1226777776653   4799999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP  411 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~  411 (488)
                      ++  +++.++|+.||++|..     .|.++.|++++|+|+|+.+...+
T Consensus       231 ~~--~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~~~n  271 (279)
T TIGR03590       231 DV--ENMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICLAEN  271 (279)
T ss_pred             CH--HHHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEeccc
Confidence            98  8999999999998874     46899999999999999876433

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=99.29  E-value=1.2e-08  Score=98.51  Aligned_cols=178  Identities=12%  Similarity=0.123  Sum_probs=121.0

Q ss_pred             CCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-CcEEEecC
Q psy15555        286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-NNVEFKVN  364 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~  364 (488)
                      +++.+++++..++  .|--...++++.++.++.     |+.+|++......     -.+.+++.+++.|+. +++.|.+.
T Consensus       282 p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v-----P~S~L~L~~~~~~-----~~~~l~~~~~~~Gv~~~Ri~f~~~  349 (468)
T PF13844_consen  282 PEDAVVFGSFNNL--FKISPETLDLWARILKAV-----PNSRLWLLRFPAS-----GEARLRRRFAAHGVDPDRIIFSPV  349 (468)
T ss_dssp             -SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS-----TTEEEEEEETSTT-----HHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred             CCCceEEEecCcc--ccCCHHHHHHHHHHHHhC-----CCcEEEEeeCCHH-----HHHHHHHHHHHcCCChhhEEEcCC
Confidence            3556666666654  577789999999999998     8999988764431     226788889999986 67999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----ceeccCCCccccceecCCHHHHHHHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----DIVIEDPETCRNGFLACDEVEYAQTIK  440 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----eiv~~~~~~~~~g~~~~~~~~l~~~i~  440 (488)
                      .+.+|....|+.+|+++-+ ..-++|.+.+||+.+|+|||+-.......    .++...   +-.-+++.|.++..+...
T Consensus       350 ~~~~ehl~~~~~~DI~LDT-~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~l---Gl~ElIA~s~~eYv~~Av  425 (468)
T PF13844_consen  350 APREEHLRRYQLADICLDT-FPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRAL---GLPELIADSEEEYVEIAV  425 (468)
T ss_dssp             --HHHHHHHGGG-SEEE---SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHH---T-GGGB-SSHHHHHHHHH
T ss_pred             CCHHHHHHHhhhCCEEeeC-CCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHc---CCchhcCCCHHHHHHHHH
Confidence            8999999999999999876 44566889999999999999965432210    122221   022355679999999999


Q ss_pred             HHHccCHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHh
Q psy15555        441 LILHLSQDTKTRISQNAVSSV---DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~---~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++.+ |++.++++.++-++..   .-|+...+++++++.|+++
T Consensus       426 ~La~-D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  426 RLAT-DPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             HHhC-CHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence            9999 9999999999887655   4588899999999988764

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.28  E-value=2e-09  Score=103.13  Aligned_cols=343  Identities=13%  Similarity=0.136  Sum_probs=207.4

Q ss_pred             ccccccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCC---hhHHHHHhhhhcccccCCCeeEEEEe
Q psy15555         48 SYNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS---PSEIIKRAHQRFNIVLPDQVINFVYL  124 (488)
Q Consensus        48 ~~~~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~  124 (488)
                      +.+++.||+|++.++..+. ....+..+.+.+.+.  ..+|+.+..++...   .+.+...+..++.             
T Consensus       255 ~~~~rlRvGylS~dlr~Ha-vg~l~~~v~e~hDRd--kfEvfay~~g~~~~dal~~rI~a~~~~~~~-------------  318 (620)
T COG3914         255 RNGKRLRVGYLSSDLRSHA-VGFLLRWVFEYHDRD--KFEVFAYSLGPPHTDALQERISAAVEKWYP-------------  318 (620)
T ss_pred             ccccceeEEEeccccccch-HHHHHHHHHHHhchh--heEEEEEecCCCCchhHHHHHHHhhhheec-------------
Confidence            3455789999998887665 445555566666554  57777765552222   2222222221111             


Q ss_pred             eccceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccc--hhhhhhhhCCCeeEE-EEeCCccchHHHHHH
Q psy15555        125 YRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAF--TYPLFSYIGGSKVAC-YIHYPTITKEMLTRV  201 (488)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~--~~~~~~~~~~~~~v~-~~h~p~~~~d~~~~~  201 (488)
                             .+....           -.....++.-..||.++..++..  ..+++. .+..|+.+ ++.+|...       
T Consensus       319 -------~~~~dd-----------~e~a~~I~~d~IdILvDl~g~T~d~r~~v~A-~RpAPiqvswlGy~aT~-------  372 (620)
T COG3914         319 -------IGRMDD-----------AEIANAIRTDGIDILVDLDGHTVDTRCQVFA-HRPAPIQVSWLGYPATT-------  372 (620)
T ss_pred             -------cCCcCH-----------HHHHHHHHhcCCeEEEeccCceeccchhhhh-cCCCceEEeeccccccc-------
Confidence                   111000           22445677788998886654443  223443 45566644 55554310       


Q ss_pred             HhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH-hccCCceEEEcCCCCchhh-h
Q psy15555        202 ARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL-WNCQLKTYKLYPPCDTEDL-K  279 (488)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~k~~vi~~~~d~~~~-~  279 (488)
                           ...+..|+                          -+|-.+.. +...+++.+. +..+    ..+.+.|-... .
T Consensus       373 -----g~p~~DY~--------------------------I~D~y~vP-p~ae~yysEkl~RLp----~cy~p~d~~~~v~  416 (620)
T COG3914         373 -----GSPNMDYF--------------------------ISDPYTVP-PTAEEYYSEKLWRLP----QCYQPVDGFEPVT  416 (620)
T ss_pred             -----CCCcceEE--------------------------eeCceecC-chHHHHHHHHHHhcc----cccCCCCCcccCC
Confidence                 00000000                          02444444 5555555543 2222    11222221110 1


Q ss_pred             cc--C--CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC
Q psy15555        280 KI--T--HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL  355 (488)
Q Consensus       280 ~~--~--~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l  355 (488)
                      +.  .  -..+++-.++++++  ...|-...+++.+.++.+..     |+-.|.+-|.+++   ++....+++++++.|+
T Consensus       417 p~~sR~~lglp~~avVf~c~~--n~~K~~pev~~~wmqIL~~v-----P~Svl~L~~~~~~---~~~~~~l~~la~~~Gv  486 (620)
T COG3914         417 PPPSRAQLGLPEDAVVFCCFN--NYFKITPEVFALWMQILSAV-----PNSVLLLKAGGDD---AEINARLRDLAEREGV  486 (620)
T ss_pred             CCcchhhcCCCCCeEEEEecC--CcccCCHHHHHHHHHHHHhC-----CCcEEEEecCCCc---HHHHHHHHHHHHHcCC
Confidence            11  1  12334545555555  45688888999999999888     8889999888754   3777899999999998


Q ss_pred             C-CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCC----CCccceeccCCCccccceecC
Q psy15555        356 E-NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSG----GPKMDIVIEDPETCRNGFLAC  430 (488)
Q Consensus       356 ~-~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~----~~~~eiv~~~~~~~~~g~~~~  430 (488)
                      . ++.+|.+..+.++..+.|..||+++-+ +.-+++.+.+||+.+|+|||+-...    -+...++...   +..-+++.
T Consensus       487 ~~eRL~f~p~~~~~~h~a~~~iADlvLDT-yPY~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~a---gi~e~vA~  562 (620)
T COG3914         487 DSERLRFLPPAPNEDHRARYGIADLVLDT-YPYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNA---GIPELVAD  562 (620)
T ss_pred             ChhheeecCCCCCHHHHHhhchhheeeec-ccCCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhc---CCchhhcC
Confidence            5 689999999999999999999988864 4445577899999999999994321    1111344433   12234556


Q ss_pred             CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHhhhh
Q psy15555        431 DEVEYAQTIKLILHLSQDTKTRISQNAVSSV---DRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       431 ~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~---~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                      +.++..+.-..+-. |...+++.+..-.+..   .-|+.+.+++++..+|..+.+.
T Consensus       563 s~~dYV~~av~~g~-dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~  617 (620)
T COG3914         563 SRADYVEKAVAFGS-DRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE  617 (620)
T ss_pred             CHHHHHHHHHHhcc-cHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence            78887777777766 7777776665544333   2589999999999999987653

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=1.7e-09  Score=99.79  Aligned_cols=320  Identities=15%  Similarity=0.141  Sum_probs=179.8

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      +||+++...   .+ +......|+++|++++++++++-+.+..  ..   .++.+..|...              ....-
T Consensus         2 ~ki~i~AGE---~S-GDllGa~LikaLk~~~~~~efvGvgG~~--m~---aeG~~sl~~~~--------------elsvm   58 (381)
T COG0763           2 LKIALSAGE---AS-GDLLGAGLIKALKARYPDVEFVGVGGEK--ME---AEGLESLFDME--------------ELSVM   58 (381)
T ss_pred             ceEEEEecc---cc-hhhHHHHHHHHHHhhCCCeEEEEeccHH--HH---hccCccccCHH--------------HHHHh
Confidence            578776433   22 5567788999999999999988777652  11   11111111110              00001


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhh--CC--CeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYI--GG--SKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~--~~--~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                      +....+..+-..+.....+.+.+...+||+++.-..+.+.+.+.+..  .+  +|++.|+- |.+ |             
T Consensus        59 Gf~EVL~~lp~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-PsV-W-------------  123 (381)
T COG0763          59 GFVEVLGRLPRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-PSV-W-------------  123 (381)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-cce-e-------------
Confidence            11122222222233334445556678999776444445555555432  23  55555432 111 1             


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC-----
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT-----  282 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~-----  282 (488)
                                     -+.-.+     ...+.+.+|++++.=++..+.+.+.+. +  ...++++ .|...+.+.+     
T Consensus       124 ---------------AWr~~R-----a~~i~~~~D~lLailPFE~~~y~k~g~-~--~~yVGHpl~d~i~~~~~r~~ar~  180 (381)
T COG0763         124 ---------------AWRPKR-----AVKIAKYVDHLLAILPFEPAFYDKFGL-P--CTYVGHPLADEIPLLPDREAARE  180 (381)
T ss_pred             ---------------eechhh-----HHHHHHHhhHeeeecCCCHHHHHhcCC-C--eEEeCChhhhhccccccHHHHHH
Confidence                           000001     112446679999999999999999544 3  6778877 4433222221     


Q ss_pred             --CCCCCCCeEEEEeeccCC--CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHH-hcCCCC
Q psy15555        283 --HSKTDGPVKIISVAQFRP--EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK-HLSLEN  357 (488)
Q Consensus       283 --~~~~~~~~~i~~~g~~~~--~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~  357 (488)
                        ....+.+...+..|+-..  .+-...+.+|+.++.++.     |+.++++--..+     .+ +.+..... ......
T Consensus       181 ~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~-----~~~~~vlp~~~~-----~~-~~~~~~~~~~~~~~~  249 (381)
T COG0763         181 KLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARY-----PDLKFVLPLVNA-----KY-RRIIEEALKWEVAGL  249 (381)
T ss_pred             HhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhC-----CCceEEEecCcH-----HH-HHHHHHHhhccccCc
Confidence              112244556666664332  245567788899998888     899987754432     21 22322222 221111


Q ss_pred             cEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----------------ceeccCCC
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----------------DIVIEDPE  421 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----------------eiv~~~~~  421 (488)
                      .+    .+..++-.+.+..||+.+..|     |.+.+|++.+|+|.|++--..+..                .++.+.  
T Consensus       250 ~~----~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~--  318 (381)
T COG0763         250 SL----ILIDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR--  318 (381)
T ss_pred             eE----EecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC--
Confidence            12    223367889999999877777     899999999999999854322210                122111  


Q ss_pred             ccccceec-----C-CHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q psy15555        422 TCRNGFLA-----C-DEVEYAQTIKLILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       422 ~~~~g~~~-----~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~  460 (488)
                          .++.     + .++.+++++..++. |.+.++++.+...+.
T Consensus       319 ----~ivPEliq~~~~pe~la~~l~~ll~-~~~~~~~~~~~~~~l  358 (381)
T COG0763         319 ----EIVPELIQEDCTPENLARALEELLL-NGDRREALKEKFREL  358 (381)
T ss_pred             ----ccchHHHhhhcCHHHHHHHHHHHhc-ChHhHHHHHHHHHHH
Confidence                1111     1 58999999999999 886666666655443

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.27  E-value=1.6e-08  Score=97.32  Aligned_cols=267  Identities=13%  Similarity=0.105  Sum_probs=150.3

Q ss_pred             HHHHHHhhhcCCcEEEecCCccch--hhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFT--YPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~--~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+++.+.+||+++.+..-...  ..++....++|++ ++|.-..+.+                         ...-.
T Consensus        83 ~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~-HveaG~rs~~-------------------------~~eE~  136 (365)
T TIGR03568        83 IGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIA-HIHGGEVTEG-------------------------AIDES  136 (365)
T ss_pred             HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEE-EEECCccCCC-------------------------CchHH
Confidence            456678889999987755422222  2244446788876 2332110000                         00001


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC------CC--CC-CCCeEEEEee
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT------HS--KT-DGPVKIISVA  296 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~------~~--~~-~~~~~i~~~g  296 (488)
                      .++       .+-+.++..++.++..++++.+.+-.+.++.++.|+ +|.-......      ..  .. +++.+++.+-
T Consensus       137 ~r~-------~i~~la~l~f~~t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~H  209 (365)
T TIGR03568       137 IRH-------AITKLSHLHFVATEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFH  209 (365)
T ss_pred             HHH-------HHHHHHhhccCCCHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeC
Confidence            111       122345788889999999999876656688889886 4432111100      01  11 2244444444


Q ss_pred             ccC--CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHH
Q psy15555        297 QFR--PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEF  374 (488)
Q Consensus       297 ~~~--~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~  374 (488)
                      +-+  .....+.+.+.++.+.+..     .++ .++.+.+... +....+.+++...+   .+++.+.+.++..++..++
T Consensus       210 p~~~~~~~~~~~l~~li~~L~~~~-----~~~-~vi~P~~~p~-~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll  279 (365)
T TIGR03568       210 PVTLEKESAEEQIKELLKALDELN-----KNY-IFTYPNADAG-SRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLL  279 (365)
T ss_pred             CCcccccCchHHHHHHHHHHHHhc-----cCC-EEEEeCCCCC-chHHHHHHHHHhcC---CCCEEEECCCChHHHHHHH
Confidence            332  2232334444444444332     344 3344544211 11222344444221   3579999999999999999


Q ss_pred             HhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHH
Q psy15555        375 SEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRI  453 (488)
Q Consensus       375 ~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~  453 (488)
                      +.|+++|..|.     -.+.||.++|+|+|+-.  . +.|.++.+    .+.+.+. |++++.+++.+++  +++.+..+
T Consensus       280 ~~a~~vitdSS-----ggi~EA~~lg~Pvv~l~--~-R~e~~~~g----~nvl~vg~~~~~I~~a~~~~~--~~~~~~~~  345 (365)
T TIGR03568       280 KNADAVIGNSS-----SGIIEAPSFGVPTINIG--T-RQKGRLRA----DSVIDVDPDKEEIVKAIEKLL--DPAFKKSL  345 (365)
T ss_pred             HhCCEEEEcCh-----hHHHhhhhcCCCEEeec--C-Cchhhhhc----CeEEEeCCCHHHHHHHHHHHh--ChHHHHHH
Confidence            99999997652     23389999999999643  3 34666655    6667676 9999999999954  44333332


Q ss_pred             HHHHHHHHhhcCHHHHHHHHHHH
Q psy15555        454 SQNAVSSVDRFSMEEFKNGFLTF  476 (488)
Q Consensus       454 ~~~a~~~~~~~s~~~~~~~~~~~  476 (488)
                      ..    ....|.....++++.++
T Consensus       346 ~~----~~~pygdg~as~rI~~~  364 (365)
T TIGR03568       346 KN----VKNPYGDGNSSERIIEI  364 (365)
T ss_pred             hh----CCCCCCCChHHHHHHHh
Confidence            11    11446555666666554

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.26  E-value=2.1e-09  Score=102.34  Aligned_cols=224  Identities=14%  Similarity=0.127  Sum_probs=124.8

Q ss_pred             HHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHH
Q psy15555        148 MILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFY  227 (488)
Q Consensus       148 ~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      .....+.+++.+||+|++-. .+... .+....++|++...|......                    .+ .........
T Consensus        83 ~~~~~~~l~~~~pDlVIsD~-~~~~~-~aa~~~giP~i~i~~~~~~~~--------------------~~-~~~~~~~~~  139 (318)
T PF13528_consen   83 IRREIRWLREFRPDLVISDF-YPLAA-LAARRAGIPVIVISNQYWFLH--------------------PN-FWLPWDQDF  139 (318)
T ss_pred             HHHHHHHHHhcCCCEEEEcC-hHHHH-HHHHhcCCCEEEEEehHHccc--------------------cc-CCcchhhhH
Confidence            34455678889999888553 23332 333378999988776432100                    00 000000111


Q ss_pred             HHHHHHHHHHH-hcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHH
Q psy15555        228 YKVFALLYSHV-GKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPL  306 (488)
Q Consensus       228 ~~~~~~~~~~~-~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~  306 (488)
                      ...+..+.... ...++..+..+-...      .....+...+++..........   ..+++.+++++|.....    .
T Consensus       140 ~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~p~~~~~~~~~~---~~~~~~iLv~~gg~~~~----~  206 (318)
T PF13528_consen  140 GRLIERYIDRYHFPPADRRLALSFYPP------LPPFFRVPFVGPIIRPEIRELP---PEDEPKILVYFGGGGPG----D  206 (318)
T ss_pred             HHHHHHhhhhccCCcccceecCCcccc------ccccccccccCchhcccccccC---CCCCCEEEEEeCCCcHH----H
Confidence            12222222222 444555555543311      0001123334433332222111   12456789999976544    5


Q ss_pred             HHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCC
Q psy15555        307 QLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWN  386 (488)
Q Consensus       307 ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~  386 (488)
                      ++++++.+         ++..++++|.+...        -+        .++|.+.++ +..++.++++.||++|..+  
T Consensus       207 ~~~~l~~~---------~~~~~~v~g~~~~~--------~~--------~~ni~~~~~-~~~~~~~~m~~ad~vIs~~--  258 (318)
T PF13528_consen  207 LIEALKAL---------PDYQFIVFGPNAAD--------PR--------PGNIHVRPF-STPDFAELMAAADLVISKG--  258 (318)
T ss_pred             HHHHHHhC---------CCCeEEEEcCCccc--------cc--------CCCEEEeec-ChHHHHHHHHhCCEEEECC--
Confidence            56666654         67788888765210        00        468988886 3478999999999998754  


Q ss_pred             CcCCcc-HHHHHHcCCcEEEeCCCCCccc-----eeccCCCccccceecC----CHHHHHHHHHHH
Q psy15555        387 EHFGIG-IVECMAAGLIMIAHKSGGPKMD-----IVIEDPETCRNGFLAC----DEVEYAQTIKLI  442 (488)
Q Consensus       387 e~~g~~-~lEa~a~G~PvI~~~~~~~~~e-----iv~~~~~~~~~g~~~~----~~~~l~~~i~~l  442 (488)
                         |.+ +.|++++|+|+|+-+..+..|.     .+++.    +.|...+    +++.|.++|+++
T Consensus       259 ---G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~----G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  259 ---GYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL----GLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             ---CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC----CCeEEcccccCCHHHHHHHHhcC
Confidence               555 9999999999999887654321     23333    4555543    678888877653

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=3.5e-08  Score=91.44  Aligned_cols=213  Identities=11%  Similarity=0.099  Sum_probs=150.0

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhc--cC-----C----CCCCCCeEEEEeeccCCC-CChHH
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKK--IT-----H----SKTDGPVKIISVAQFRPE-KDHPL  306 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~--~~-----~----~~~~~~~~i~~~g~~~~~-k~~~~  306 (488)
                      .-+|.-++.++..++++.+.+..++++.+++|+ +|.-....  ..     .    ....++.+++.+-|-+.. ++...
T Consensus       144 ~~S~~hfapte~ar~nLl~EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~  223 (383)
T COG0381         144 HLSDLHFAPTEIARKNLLREGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPLEE  223 (383)
T ss_pred             HhhhhhcCChHHHHHHHHHcCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccHHH
Confidence            446888999999999999987777789999998 44322210  00     0    111233555555555543 78899


Q ss_pred             HHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHH-HhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC
Q psy15555        307 QLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLC-KHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW  385 (488)
Q Consensus       307 ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~-~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~  385 (488)
                      +++++.++.+.+     +++. ++.+-|+.       ..+++.. +.++-.++|.++..+...+...++..|-+.+.-| 
T Consensus       224 i~~al~~i~~~~-----~~~~-viyp~H~~-------~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-  289 (383)
T COG0381         224 ICEALREIAEEY-----PDVI-VIYPVHPR-------PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-  289 (383)
T ss_pred             HHHHHHHHHHhC-----CCce-EEEeCCCC-------hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-
Confidence            999999999887     5665 46677764       2233333 4444456799999999999999999998777765 


Q ss_pred             CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhc
Q psy15555        386 NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRF  464 (488)
Q Consensus       386 ~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~  464 (488)
                          |--.=||-..|+||++-....-+.|-++.+     .-.++. +.+.+.+++..+++ +++.+++|++..    ..|
T Consensus       290 ----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-----t~~lvg~~~~~i~~~~~~ll~-~~~~~~~m~~~~----npY  355 (383)
T COG0381         290 ----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-----TNILVGTDEENILDAATELLE-DEEFYERMSNAK----NPY  355 (383)
T ss_pred             ----CchhhhHHhcCCcEEeeccCCCCccceecC-----ceEEeCccHHHHHHHHHHHhh-ChHHHHHHhccc----CCC
Confidence                456679999999999977654444666554     344555 89999999999999 999999988765    445


Q ss_pred             CHHHHHHHHHHHHHHh
Q psy15555        465 SMEEFKNGFLTFTQPL  480 (488)
Q Consensus       465 s~~~~~~~~~~~~~~~  480 (488)
                      .-....+++.+++.+.
T Consensus       356 gdg~as~rIv~~l~~~  371 (383)
T COG0381         356 GDGNASERIVEILLNY  371 (383)
T ss_pred             cCcchHHHHHHHHHHH
Confidence            5555555555555543

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.21  E-value=4.7e-09  Score=99.39  Aligned_cols=309  Identities=14%  Similarity=0.119  Sum_probs=180.0

Q ss_pred             ceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHHHHHH
Q psy15555         68 GERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGS  147 (488)
Q Consensus        68 ~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                      |..+...|+++|++++|+.++.-..+..-  .+   .+....+.              ......-+....+..+...++.
T Consensus        10 GD~~ga~Li~~Lk~~~p~~~~~GvGG~~M--~~---~G~~~l~d--------------~~~lsvmG~~Evl~~l~~~~~~   70 (373)
T PF02684_consen   10 GDLHGARLIRALKARDPDIEFYGVGGPRM--QA---AGVESLFD--------------MEELSVMGFVEVLKKLPKLKRL   70 (373)
T ss_pred             HHHHHHHHHHHHHhhCCCcEEEEEechHH--Hh---CCCceecc--------------hHHhhhccHHHHHHHHHHHHHH
Confidence            56788899999999999999888777621  10   11111111              1111111223334444444555


Q ss_pred             HHHHHHHhhhcCCcEEEecCCccchhhhhhh--hCCCe--eEEEEeCCcc-chHHHHHHHhhhhcccCccccccCccchh
Q psy15555        148 MILGVEALLSFQPDIYIDTMGYAFTYPLFSY--IGGSK--VACYIHYPTI-TKEMLTRVARRVITHNNSQRVANNPILTS  222 (488)
Q Consensus       148 ~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~--~~~~~--~v~~~h~p~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      ...+.+.+...+||+++.-..+.+.+.+++.  ..+++  ++.|+- |.+ .|                           
T Consensus        71 ~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-PqvWAW---------------------------  122 (373)
T PF02684_consen   71 FRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-PQVWAW---------------------------  122 (373)
T ss_pred             HHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-Cceeee---------------------------
Confidence            5667777888999977655445555565543  34555  555443 332 11                           


Q ss_pred             hhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC-----CCCCCCC-eEEEEe
Q psy15555        223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT-----HSKTDGP-VKIISV  295 (488)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~-----~~~~~~~-~~i~~~  295 (488)
                       +...       .+.+-+.+|.+++.=++..+.+.+.+ .  ++..++|| .|........     ...+.++ .+.+..
T Consensus       123 -r~~R-------~~~i~~~~D~ll~ifPFE~~~y~~~g-~--~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLP  191 (373)
T PF02684_consen  123 -RPGR-------AKKIKKYVDHLLVIFPFEPEFYKKHG-V--PVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLP  191 (373)
T ss_pred             -CccH-------HHHHHHHHhheeECCcccHHHHhccC-C--CeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeC
Confidence             0000       11123456999999999999999854 3  47888888 4432211111     1122333 455555


Q ss_pred             eccCC--CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHH
Q psy15555        296 AQFRP--EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKE  373 (488)
Q Consensus       296 g~~~~--~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~  373 (488)
                      |+-..  .+....++++++.+.++.     |++++++.....     ...+.+++.....+....+...    .++-.+.
T Consensus       192 GSR~~EI~rllP~~l~aa~~l~~~~-----p~l~fvvp~a~~-----~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~  257 (373)
T PF02684_consen  192 GSRKSEIKRLLPIFLEAAKLLKKQR-----PDLQFVVPVAPE-----VHEELIEEILAEYPPDVSIVII----EGESYDA  257 (373)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEEecCCH-----HHHHHHHHHHHhhCCCCeEEEc----CCchHHH
Confidence            64322  244577799999999988     899988765432     2223355555554433222222    2577789


Q ss_pred             HHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----------------ceeccCCCccccc-ee-cC-CHHH
Q psy15555        374 FSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----------------DIVIEDPETCRNG-FL-AC-DEVE  434 (488)
Q Consensus       374 ~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----------------eiv~~~~~~~~~g-~~-~~-~~~~  434 (488)
                      ++.||+.+..|     |.+.+|++.+|+|.|..--.+...                .++.+.  . ... ++ -+ +++.
T Consensus       258 m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~--~-v~PEliQ~~~~~~~  329 (373)
T PF02684_consen  258 MAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGR--E-VVPELIQEDATPEN  329 (373)
T ss_pred             HHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCC--C-cchhhhcccCCHHH
Confidence            99999888887     899999999999999843322110                122111  0 000 11 11 7999


Q ss_pred             HHHHHHHHHccCHHHHHHHHHHH
Q psy15555        435 YAQTIKLILHLSQDTKTRISQNA  457 (488)
Q Consensus       435 l~~~i~~ll~~~~~~~~~~~~~a  457 (488)
                      +++++..++. |++.++...+..
T Consensus       330 i~~~~~~ll~-~~~~~~~~~~~~  351 (373)
T PF02684_consen  330 IAAELLELLE-NPEKRKKQKELF  351 (373)
T ss_pred             HHHHHHHHhc-CHHHHHHHHHHH
Confidence            9999999998 777654444433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.18  E-value=5e-09  Score=99.67  Aligned_cols=272  Identities=14%  Similarity=0.100  Sum_probs=151.0

Q ss_pred             HHHHHHhhhcCCcEEEecCCcc-ch-hhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYA-FT-YPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~-~~-~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+.+.+.+||+|+....-. .+ ..++....++| +.+++.-..+.|.                  .   .....-.
T Consensus        57 ~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ip-v~HieaGlRs~d~------------------~---~g~~de~  114 (346)
T PF02350_consen   57 IELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIP-VAHIEAGLRSGDR------------------T---EGMPDEI  114 (346)
T ss_dssp             HHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-E-EEEES-----S-T------------------T---SSTTHHH
T ss_pred             HHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCC-EEEecCCCCcccc------------------C---CCCchhh
Confidence            3455778889999776443222 22 23444467888 4555432110000                  0   0111111


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccCC--C--------CCCCCeEEEEe
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKITH--S--------KTDGPVKIISV  295 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~~--~--------~~~~~~~i~~~  295 (488)
                      .+..       +-+.++.-++.++..++++.+.+..++++.+++|+ +|.-.......  .        ...++.+++..
T Consensus       115 ~R~~-------i~~la~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~  187 (346)
T PF02350_consen  115 NRHA-------IDKLAHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTL  187 (346)
T ss_dssp             HHHH-------HHHH-SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-
T ss_pred             hhhh-------hhhhhhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEe
Confidence            2222       33458999999999999999987777899999997 55322211110  0        12344445544


Q ss_pred             eccCCC---CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHH
Q psy15555        296 AQFRPE---KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       296 g~~~~~---k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~  372 (488)
                      -+.+..   +....+.++++.+.+.      +++.+++.....    +.....+.+.++++   +++.+...+++.++..
T Consensus       188 H~~t~~~~~~~~~~i~~~l~~L~~~------~~~~vi~~~hn~----p~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~  254 (346)
T PF02350_consen  188 HPVTNEDNPERLEQILEALKALAER------QNVPVIFPLHNN----PRGSDIIIEKLKKY---DNVRLIEPLGYEEYLS  254 (346)
T ss_dssp             S-CCCCTHH--HHHHHHHHHHHHHH------TTEEEEEE--S-----HHHHHHHHHHHTT----TTEEEE----HHHHHH
T ss_pred             CcchhcCChHHHHHHHHHHHHHHhc------CCCcEEEEecCC----chHHHHHHHHhccc---CCEEEECCCCHHHHHH
Confidence            443332   3356777788887765      467766655321    13345666656554   3899999999999999


Q ss_pred             HHHhCcEEEEcCCCCcCCccHH-HHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHH
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIV-ECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTK  450 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~l-Ea~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~  450 (488)
                      +++.|+++|+-|     | .+. ||..+|+|+|.-...+.+.+-...+    .+-+ +. |.+++.+++.+++. +++.+
T Consensus       255 ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~----~nvl-v~~~~~~I~~ai~~~l~-~~~~~  322 (346)
T PF02350_consen  255 LLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERG----SNVL-VGTDPEAIIQAIEKALS-DKDFY  322 (346)
T ss_dssp             HHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTT----SEEE-ETSSHHHHHHHHHHHHH--HHHH
T ss_pred             HHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhc----ceEE-eCCCHHHHHHHHHHHHh-ChHHH
Confidence            999999999876     5 677 9999999999987766766766665    4444 65 99999999999998 65555


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      .++...    ..-|.-...++++.++++
T Consensus       323 ~~~~~~----~npYgdG~as~rI~~~Lk  346 (346)
T PF02350_consen  323 RKLKNR----PNPYGDGNASERIVEILK  346 (346)
T ss_dssp             HHHHCS------TT-SS-HHHHHHHHHH
T ss_pred             HhhccC----CCCCCCCcHHHHHHHhhC
Confidence            444321    145666666777766653

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.14  E-value=1.5e-07  Score=93.15  Aligned_cols=322  Identities=15%  Similarity=0.125  Sum_probs=175.1

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      .||.++..   ..+ |......|+++|+++.|++++.-..+..  ..   ..+.+..++.              .....-
T Consensus       227 ~kIfI~AG---E~S-GDlhgA~Li~aLk~~~P~i~~~GvGG~~--M~---aaG~e~l~d~--------------~eLsVm  283 (608)
T PRK01021        227 TSCFISAG---EHS-GDTLGGNLLKEIKALYPDIHCFGVGGPQ--MR---AEGFHPLFNM--------------EEFQVS  283 (608)
T ss_pred             CeEEEEec---ccc-HHHHHHHHHHHHHhcCCCcEEEEEccHH--HH---hCcCcccCCh--------------HHhhhh
Confidence            46766532   233 5677889999999999988877666641  11   0111111110              011111


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhh--hCCC--eeEEEEeCCcc-chHHHHHHHhhhhc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSY--IGGS--KVACYIHYPTI-TKEMLTRVARRVIT  207 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~--~~~~--~~v~~~h~p~~-~~d~~~~~~~~~~~  207 (488)
                      +....+..+...++....+.+.+++.+||+++.-....+.+.+++.  ..|+  |++.|+- |.+ .|            
T Consensus       284 G~~EVL~~l~~l~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs-PqVWAW------------  350 (608)
T PRK01021        284 GFWEVLLALFKLWYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC-PSIWAW------------  350 (608)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC-ccceee------------
Confidence            2223334444445555667777888999977644434444555543  3453  7666543 221 11            


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC----
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT----  282 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~----  282 (488)
                                     .+..    .    +.+-+.+|.+++.=+...+.+++. +.  ++..+++| +|.-...+..    
T Consensus       351 ---------------R~~R----i----kki~k~vD~ll~IfPFE~~~y~~~-gv--~v~yVGHPL~d~i~~~~~~~~~r  404 (608)
T PRK01021        351 ---------------RPKR----K----TILEKYLDLLLLILPFEQNLFKDS-PL--RTVYLGHPLVETISSFSPNLSWK  404 (608)
T ss_pred             ---------------Ccch----H----HHHHHHhhhheecCccCHHHHHhc-CC--CeEEECCcHHhhcccCCCHHHHH
Confidence                           0000    0    123345799999999999999984 43  47888888 4432211110    


Q ss_pred             --CCCC-CCCeEEEEeeccCCC--CChHHHHHHHH--HhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC
Q psy15555        283 --HSKT-DGPVKIISVAQFRPE--KDHPLQLRAMY--QLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL  355 (488)
Q Consensus       283 --~~~~-~~~~~i~~~g~~~~~--k~~~~ll~a~~--~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l  355 (488)
                        ...+ +++.+-+..|+-..+  +....+++|++  .+.        ++.++++. ..+.    ...+.+++..++.++
T Consensus       405 ~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~--------~~l~fvvp-~a~~----~~~~~i~~~~~~~~~  471 (608)
T PRK01021        405 EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA--------STHQLLVS-SANP----KYDHLILEVLQQEGC  471 (608)
T ss_pred             HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc--------cCeEEEEe-cCch----hhHHHHHHHHhhcCC
Confidence              1112 334455666643222  33456666665  332        35677553 3321    223555665543331


Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc------------------ceec
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM------------------DIVI  417 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~------------------eiv~  417 (488)
                       -.+.+...   ++-.++++.||+.+..|     |.+.+|++.+|+|.|+.-..+...                  .++.
T Consensus       472 -~~~~ii~~---~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIa  542 (608)
T PRK01021        472 -LHSHIVPS---QFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIIL  542 (608)
T ss_pred             -CCeEEecC---cchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhc
Confidence             12333321   12368999999999888     999999999999999833221100                  1111


Q ss_pred             cCCCcccccee---cC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHh
Q psy15555        418 EDPETCRNGFL---AC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSVD  462 (488)
Q Consensus       418 ~~~~~~~~g~~---~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~  462 (488)
                      +.  +-.--++   .+ +++.+++++ +++. |++.++++.+.-.+..+
T Consensus       543 gr--~VvPEllqgQ~~~tpe~La~~l-~lL~-d~~~r~~~~~~l~~lr~  587 (608)
T PRK01021        543 GS--TIFPEFIGGKKDFQPEEVAAAL-DILK-TSQSKEKQKDACRDLYQ  587 (608)
T ss_pred             CC--CcchhhcCCcccCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHH
Confidence            11  0000112   12 799999996 8888 88877777766554443

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.08  E-value=6.4e-10  Score=94.06  Aligned_cols=157  Identities=13%  Similarity=0.002  Sum_probs=81.0

Q ss_pred             CCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHHHH
Q psy15555         66 GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSI  145 (488)
Q Consensus        66 gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (488)
                      ||+++++..++++|.++|  ++|.+++...+....          . ....+ +.+..++......  .+...       
T Consensus         1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~----------~-~~~~~-~~~~~~~~~~~~~--~~~~~-------   57 (160)
T PF13579_consen    1 GGIERYVRELARALAARG--HEVTVVTPQPDPEDD----------E-EEEDG-VRVHRLPLPRRPW--PLRLL-------   57 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG-----------S-EEETT-EEEEEE--S-SSS--GGGHC-------
T ss_pred             CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCccc----------c-cccCC-ceEEeccCCccch--hhhhH-------
Confidence            689999999999999995  555555544222110          0 01123 5665555433321  11111       


Q ss_pred             HHHHHHHHHh--hhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchh
Q psy15555        146 GSMILGVEAL--LSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTS  222 (488)
Q Consensus       146 ~~~~~~~~~l--~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (488)
                      .......+.+  +..+||+||.+........ +++...++|++..+|......                           
T Consensus        58 ~~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---------------------------  110 (160)
T PF13579_consen   58 RFLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR---------------------------  110 (160)
T ss_dssp             CHHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T------------------------------
T ss_pred             HHHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh---------------------------
Confidence            1113345556  7889999997763322222 223356899999999532100                           


Q ss_pred             hhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC
Q psy15555        223 FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP  272 (488)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~  272 (488)
                      ......+.+..+++..++.+|.++++|+.+++.+.+.+..++|+.++|||
T Consensus       111 ~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g~~~~ri~vipnG  160 (160)
T PF13579_consen  111 GSRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRRYGVPPDRIHVIPNG  160 (160)
T ss_dssp             ---HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHHH---GGGEEE----
T ss_pred             ccchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHHhCCCCCcEEEeCcC
Confidence            01222334456677889999999999999999999955555699999996

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.06  E-value=2.5e-07  Score=90.73  Aligned_cols=158  Identities=14%  Similarity=0.118  Sum_probs=95.0

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEE-EEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI-FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ++..+++..|++...+. . +++.+.....+.      +.+++ .+|.+...      +.+.      .+++++.+.+++
T Consensus       224 ~~~~v~vs~Gs~~~~~~-~-~~~~~~~al~~~------~~~~i~~~g~~~~~------~~~~------~~~~~v~~~~~~  283 (392)
T TIGR01426       224 GRPVVLISLGTVFNNQP-S-FYRTCVEAFRDL------DWHVVLSVGRGVDP------ADLG------ELPPNVEVRQWV  283 (392)
T ss_pred             CCCEEEEecCccCCCCH-H-HHHHHHHHHhcC------CCeEEEEECCCCCh------hHhc------cCCCCeEEeCCC
Confidence            34567778888644332 2 333333332232      33444 45554321      1221      135789999999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---ceeccCCCccccceecC----CHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC----DEVEYAQT  438 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~----~~~~l~~~  438 (488)
                      ++.   .++..||++|..+    +..++.||+++|+|+|+.+..+...   +.+.+.    +.|....    +.++++++
T Consensus       284 p~~---~ll~~~~~~I~hg----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~----g~g~~l~~~~~~~~~l~~a  352 (392)
T TIGR01426       284 PQL---EILKKADAFITHG----GMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL----GLGRHLPPEEVTAEKLREA  352 (392)
T ss_pred             CHH---HHHhhCCEEEECC----CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC----CCEEEeccccCCHHHHHHH
Confidence            764   5789999988643    3357999999999999977643321   223333    4565543    67899999


Q ss_pred             HHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Q psy15555        439 IKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTF  476 (488)
Q Consensus       439 i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~  476 (488)
                      +.++++ |++.++++.+-+.+....-..+..++.+.++
T Consensus       353 i~~~l~-~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~  389 (392)
T TIGR01426       353 VLAVLS-DPRYAERLRKMRAEIREAGGARRAADEIEGF  389 (392)
T ss_pred             HHHHhc-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence            999998 8876666544443333444555555555443

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.01  E-value=2e-07  Score=91.85  Aligned_cols=92  Identities=15%  Similarity=0.075  Sum_probs=65.1

Q ss_pred             CCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecC
Q psy15555        354 SLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLAC  430 (488)
Q Consensus       354 ~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~  430 (488)
                      .++++|.+.+++|..   .++..||++|.    .++..++.||+++|+|+|..+..+..   .+.+...    +.|...+
T Consensus       285 ~~~~~v~~~~~~p~~---~ll~~~d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~----G~g~~l~  353 (401)
T cd03784         285 DLPDNVRVVDFVPHD---WLLPRCAAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAEL----GAGPALD  353 (401)
T ss_pred             CCCCceEEeCCCCHH---HHhhhhheeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHC----CCCCCCC
Confidence            346799999998654   56888999985    34457999999999999998775431   0233333    5666653


Q ss_pred             ----CHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy15555        431 ----DEVEYAQTIKLILHLSQDTKTRISQNAV  458 (488)
Q Consensus       431 ----~~~~l~~~i~~ll~~~~~~~~~~~~~a~  458 (488)
                          +.+++.+++.++++ ++ .+++..+.+.
T Consensus       354 ~~~~~~~~l~~al~~~l~-~~-~~~~~~~~~~  383 (401)
T cd03784         354 PRELTAERLAAALRRLLD-PP-SRRRAAALLR  383 (401)
T ss_pred             cccCCHHHHHHHHHHHhC-HH-HHHHHHHHHH
Confidence                68999999999997 53 4444444443

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.97  E-value=1.1e-06  Score=85.69  Aligned_cols=350  Identities=12%  Similarity=0.017  Sum_probs=174.6

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHh--hhhccc--ccCC-CeeE--EEEee
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRA--HQRFNI--VLPD-QVIN--FVYLY  125 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~v~--~~~~~  125 (488)
                      |||++...+....-|-|-.+..++..|++..|+.++.+++..+..+.....+.+  .+.|..  .... .+..  +....
T Consensus         1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~   80 (426)
T PRK10017          1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL   80 (426)
T ss_pred             CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCccchhhhcccccccchhhhhhhhcccccccchhHHHHH
Confidence            788887655443447889999999999999999999999998765431110000  000000  0000 0000  00000


Q ss_pred             ccceeeccCchhHHH-----HHHHHHHHHHHHHHhhhcCCcEEEecCCcc---------chhhhhhhhCCCeeEEEEeCC
Q psy15555        126 RRKFVEASLYPYFTL-----LGQSIGSMILGVEALLSFQPDIYIDTMGYA---------FTYPLFSYIGGSKVACYIHYP  191 (488)
Q Consensus       126 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~pDiii~~~~~~---------~~~~~~~~~~~~~~v~~~h~p  191 (488)
                      ..++...-.+.+...     ............+.++  +.|+++...+..         +.+..++...++|++++-+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gqsi  158 (426)
T PRK10017         81 RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLS--GYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGHSV  158 (426)
T ss_pred             HhhhhHHHHHhhhccccccccccchhhHHHHHHHHH--hCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECCcC
Confidence            000000000000000     0000000111222222  478777553221         111223346688888865532


Q ss_pred             ccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcC
Q psy15555        192 TITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYP  271 (488)
Q Consensus       192 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~  271 (488)
                      .                             +...   +....+.+.+++++|.|.+-.+...+.+.+++....++.+.+.
T Consensus       159 G-----------------------------Pf~~---~~~r~l~r~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aD  206 (426)
T PRK10017        159 G-----------------------------PFQD---EQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVD  206 (426)
T ss_pred             C-----------------------------CcCC---HHHHHHHHHHHhcCCEEEEccHHHHHHHHHhCCCccceEEecC
Confidence            1                             1111   1223456678899999999999999999886544346666554


Q ss_pred             CC-Cchhh--h--cc------CCCCCCCCeEEEEeeccCCC-C----C---h-HHHHHHHHHhHHhhhhhccCceEEEEE
Q psy15555        272 PC-DTEDL--K--KI------THSKTDGPVKIISVAQFRPE-K----D---H-PLQLRAMYQLRQIISEELWDNLKLIFI  331 (488)
Q Consensus       272 ~~-d~~~~--~--~~------~~~~~~~~~~i~~~g~~~~~-k----~---~-~~ll~a~~~l~~~~~~~~~~~~~l~iv  331 (488)
                      +. -.+..  .  +.      ......++.+-+.+..+.+. +    .   . ..+.+++..+.++       +.+++++
T Consensus       207 pAF~L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~-------g~~Vv~l  279 (426)
T PRK10017        207 TAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDE-------GYQVIAL  279 (426)
T ss_pred             hhhhCCccccccccchhhhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHC-------CCeEEEE
Confidence            31 11110  0  00      00011223333334433311 1    1   1 2334445555432       5567777


Q ss_pred             ecCC-----CCCcHHHHHHHHHHHHhcCCCCcEE-EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEE
Q psy15555        332 GSTR-----NEEDEVCVKDMQDLCKHLSLENNVE-FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA  405 (488)
Q Consensus       332 G~~~-----~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~  405 (488)
                      +.+.     ..+|.....++.+..   .-+++++ +.+..+..|+..+++.||++|+.-     =|..+=|++.|+|+|+
T Consensus       280 p~~~~~~~~~~dD~~~~~~l~~~~---~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~R-----lHa~I~a~~~gvP~i~  351 (426)
T PRK10017        280 STCTGIDSYNKDDRMVALNLRQHV---SDPARYHVVMDELNDLEMGKILGACELTVGTR-----LHSAIISMNFGTPAIA  351 (426)
T ss_pred             ecccCccCCCCchHHHHHHHHHhc---ccccceeEecCCCChHHHHHHHhhCCEEEEec-----chHHHHHHHcCCCEEE
Confidence            7542     222222223444433   3233333 344445679999999999988754     3689999999999999


Q ss_pred             eCCCCCccceeccCCCccccceec--C--CHHHHHHHHHHHHccCHHHHHHHHH
Q psy15555        406 HKSGGPKMDIVIEDPETCRNGFLA--C--DEVEYAQTIKLILHLSQDTKTRISQ  455 (488)
Q Consensus       406 ~~~~~~~~eiv~~~~~~~~~g~~~--~--~~~~l~~~i~~ll~~~~~~~~~~~~  455 (488)
                      -....=...+.++.+   ...+..  +  +.+++.+.+.++++ +.+..++.-+
T Consensus       352 i~Y~~K~~~~~~~lg---~~~~~~~~~~l~~~~Li~~v~~~~~-~r~~~~~~l~  401 (426)
T PRK10017        352 INYEHKSAGIMQQLG---LPEMAIDIRHLLDGSLQAMVADTLG-QLPALNARLA  401 (426)
T ss_pred             eeehHHHHHHHHHcC---CccEEechhhCCHHHHHHHHHHHHh-CHHHHHHHHH
Confidence            665321123343320   112222  2  67899999999999 6655444433

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=98.95  E-value=8.6e-07  Score=82.98  Aligned_cols=291  Identities=14%  Similarity=0.132  Sum_probs=156.9

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||++-....    .-.....+++++|.++  |++|++++.+.+.. .++.+.    ++       +++..+....   .
T Consensus         1 MkIwiDi~~p----~hvhfFk~~I~eL~~~--GheV~it~R~~~~~-~~LL~~----yg-------~~y~~iG~~g---~   59 (335)
T PF04007_consen    1 MKIWIDITHP----AHVHFFKNIIRELEKR--GHEVLITARDKDET-EELLDL----YG-------IDYIVIGKHG---D   59 (335)
T ss_pred             CeEEEECCCc----hHHHHHHHHHHHHHhC--CCEEEEEEeccchH-HHHHHH----cC-------CCeEEEcCCC---C
Confidence            7777633221    1346778899999998  78888888875432 223322    22       3444333222   1


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQ  212 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~  212 (488)
                      ...   ..+.....-.....+++++++||++++... +.. +.+++..|+|.+.+...+....                 
T Consensus        60 ~~~---~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s-~~a-~~va~~lgiP~I~f~D~e~a~~-----------------  117 (335)
T PF04007_consen   60 SLY---GKLLESIERQYKLLKLIKKFKPDVAISFGS-PEA-ARVAFGLGIPSIVFNDTEHAIA-----------------  117 (335)
T ss_pred             CHH---HHHHHHHHHHHHHHHHHHhhCCCEEEecCc-HHH-HHHHHHhCCCeEEEecCchhhc-----------------
Confidence            111   111112222334556778899999986642 222 3333477999998776542100                 


Q ss_pred             ccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCch----hhhccCC----C
Q psy15555        213 RVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTE----DLKKITH----S  284 (488)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~----~~~~~~~----~  284 (488)
                                           ..+..+..+|.+++..-.....+.+. |.. +-..-+||++..    .|.+.+.    .
T Consensus       118 ---------------------~~~Lt~Pla~~i~~P~~~~~~~~~~~-G~~-~~i~~y~G~~E~ayl~~F~Pd~~vl~~l  174 (335)
T PF04007_consen  118 ---------------------QNRLTLPLADVIITPEAIPKEFLKRF-GAK-NQIRTYNGYKELAYLHPFKPDPEVLKEL  174 (335)
T ss_pred             ---------------------cceeehhcCCeeECCcccCHHHHHhc-CCc-CCEEEECCeeeEEeecCCCCChhHHHHc
Confidence                                 01123456899998887666666664 433 222335665431    1222221    1


Q ss_pred             CCCCCeEEEEeeccCC-----C-CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCc
Q psy15555        285 KTDGPVKIISVAQFRP-----E-KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENN  358 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~-----~-k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~  358 (488)
                      ..++.++++.  |...     . +....+-+.+..+.+..      +. ++++++....         +++.++.+    
T Consensus       175 g~~~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~------~~-vV~ipr~~~~---------~~~~~~~~----  232 (335)
T PF04007_consen  175 GLDDEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYG------RN-VVIIPRYEDQ---------RELFEKYG----  232 (335)
T ss_pred             CCCCCCEEEE--EeccccCeeecCccchHHHHHHHHHhhC------ce-EEEecCCcch---------hhHHhccC----
Confidence            1123333332  2111     1 12233456666666553      33 7778876421         22333322    


Q ss_pred             EEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC--ccceeccCCCcccccee--cCCHHH
Q psy15555        359 VEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP--KMDIVIEDPETCRNGFL--ACDEVE  434 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~--~~eiv~~~~~~~~~g~~--~~~~~~  434 (488)
                      +.+....  -+...++.-||++|+.+     |....||+..|+|.|.+-.+..  ..+...      +.|.+  +.|+++
T Consensus       233 ~~i~~~~--vd~~~Ll~~a~l~Ig~g-----gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~------~~Gll~~~~~~~e  299 (335)
T PF04007_consen  233 VIIPPEP--VDGLDLLYYADLVIGGG-----GTMAREAALLGTPAISCFPGKLLAVDKYLI------EKGLLYHSTDPDE  299 (335)
T ss_pred             ccccCCC--CCHHHHHHhcCEEEeCC-----cHHHHHHHHhCCCEEEecCCcchhHHHHHH------HCCCeEecCCHHH
Confidence            3333332  25568999999999854     7788999999999999654321  113333      23555  459999


Q ss_pred             HHHHHHHHHc
Q psy15555        435 YAQTIKLILH  444 (488)
Q Consensus       435 l~~~i~~ll~  444 (488)
                      +.+.+.+...
T Consensus       300 i~~~v~~~~~  309 (335)
T PF04007_consen  300 IVEYVRKNLG  309 (335)
T ss_pred             HHHHHHHhhh
Confidence            8886665544

They are found in archaea and some bacteria and have no known function.

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.89  E-value=1.5e-06  Score=78.29  Aligned_cols=233  Identities=12%  Similarity=0.133  Sum_probs=142.4

Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHH-HHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChH
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVI-QLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHP  305 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~-~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~  305 (488)
                      ..+.+..+.+.+.++..++++ ++.+...+. +.++.+.+....|.-.++ ..........++....+-+|+....-|-+
T Consensus        84 k~rlfy~lRR~aq~rvg~v~a-trGD~~~~a~~~~~v~~~llyfpt~m~~-~l~~~~~~~~~~~~~tIlvGNSgd~SN~H  161 (322)
T PRK02797         84 KFRLFYPLRRLAQKRVGHVFA-TRGDLSYFAQRHPKVPGSLLYFPTRMDP-SLNTMANDRQRAGKMTILVGNSGDRSNRH  161 (322)
T ss_pred             hHHHHHHHHHHHHhhcCeEEE-ecchHHHHHHhcCCCCccEEecCCcchh-hhccccccccCCCceEEEEeCCCCCcccH
Confidence            344555566778889999999 777777754 444555454233322332 22222211122334666678777665533


Q ss_pred             HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe-cCCChHHHHHHHHhCcEEEEcC
Q psy15555        306 LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK-VNLPYEDMKKEFSEGLIGLHAM  384 (488)
Q Consensus       306 ~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~-g~~~~~el~~~~~~ad~~v~~s  384 (488)
                        ++++..+++..+    .++++++-=+-| ..+++|.+++++..+++--.++++.+ ..+|.+|..++++.||+.++.-
T Consensus       162 --ie~L~~l~~~~~----~~v~ii~PlsYp-~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~  234 (322)
T PRK02797        162 --IEALRALHQQFG----DNVKIIVPMGYP-ANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF  234 (322)
T ss_pred             --HHHHHHHHHHhC----CCeEEEEECCcC-CCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee
Confidence              555555554442    577765533333 23568999999999988754666655 5689999999999999776654


Q ss_pred             -CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhh
Q psy15555        385 -WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDR  463 (488)
Q Consensus       385 -~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~  463 (488)
                       ...+.| +++=.+..|+||+.+.......++.+.+     .-++++ .+.+...+.      .+..+++...-++.+. 
T Consensus       235 ~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~g-----v~Vlf~-~d~L~~~~v------~e~~rql~~~dk~~I~-  300 (322)
T PRK02797        235 ARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQG-----LPVLFT-GDDLDEDIV------REAQRQLASVDKNIIA-  300 (322)
T ss_pred             chhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCC-----CeEEec-CCcccHHHH------HHHHHHHHhhCcceee-
Confidence             455655 6777899999999986654554555443     223222 222221111      1123334444444444 


Q ss_pred             cCHHHHHHHHHHHHHHhhh
Q psy15555        464 FSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       464 ~s~~~~~~~~~~~~~~~~~  482 (488)
                      |+.++..+.|.++++....
T Consensus       301 Ff~pn~~~~W~~~l~~~~g  319 (322)
T PRK02797        301 FFSPNYLQGWRNALAIAAG  319 (322)
T ss_pred             ecCHhHHHHHHHHHHHhhC
Confidence            9999999999999987654

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=98.87  E-value=4.9e-06  Score=83.44  Aligned_cols=139  Identities=13%  Similarity=0.042  Sum_probs=88.0

Q ss_pred             CeEEEEeeccCCC-C----ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        289 PVKIISVAQFRPE-K----DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       289 ~~~i~~~g~~~~~-k----~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                      ..+++..|+.... +    -...+++|++++         + .++++...+...      +        .++++||.+.+
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---------~-~~viw~~~~~~~------~--------~~~p~Nv~i~~  352 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---------P-YNVLWKYDGEVE------A--------INLPANVLTQK  352 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---------C-CeEEEEECCCcC------c--------ccCCCceEEec
Confidence            4677788876432 2    233444444443         3 466665543211      1        23478999999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---ceeccCCCccccceecC----CHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC----DEVEYA  436 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~----~~~~l~  436 (488)
                      ++|+.++..- ..+++||.    .++..++.||+.+|+|+|+-+..+-..   ..++..    +.|...+    +.+++.
T Consensus       353 w~Pq~~lL~h-p~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~----G~G~~l~~~~~t~~~l~  423 (507)
T PHA03392        353 WFPQRAVLKH-KNVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL----GIGRALDTVTVSAAQLV  423 (507)
T ss_pred             CCCHHHHhcC-CCCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc----CcEEEeccCCcCHHHHH
Confidence            9988654311 45788885    345678999999999999977643211   223333    5676653    789999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHHHH
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVSSV  461 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~~~  461 (488)
                      ++|.++++ |++.+++..+-+....
T Consensus       424 ~ai~~vl~-~~~y~~~a~~ls~~~~  447 (507)
T PHA03392        424 LAIVDVIE-NPKYRKNLKELRHLIR  447 (507)
T ss_pred             HHHHHHhC-CHHHHHHHHHHHHHHH
Confidence            99999998 8776666555544443

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.77  E-value=4.4e-07  Score=83.46  Aligned_cols=217  Identities=14%  Similarity=0.122  Sum_probs=145.2

Q ss_pred             cCEEEEcChhH-HHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhh
Q psy15555        242 SDIIMVNSSWT-EEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISE  320 (488)
Q Consensus       242 ~d~ii~~s~~~-~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~  320 (488)
                      .|.|++.++.. ++.+.+.++ ..+...++.++|.+.+.+..... .-.--+.++|+..+.     ..+.++++...-.-
T Consensus       139 fd~v~~~g~~l~~~~yyq~~~-~~~~~~~~~a~d~~~~~~i~~da-~~~~dL~~ign~~pD-----r~e~~ke~~~~ps~  211 (373)
T COG4641         139 FDNVLSFGGGLVANKYYQEGG-ARNCYYLPWAVDDSLFHPIPPDA-SYDVDLNLIGNPYPD-----RVEEIKEFFVEPSF  211 (373)
T ss_pred             hhhhhhccchHHHHHHHHhhc-ccceeccCccCCchhcccCCccc-cceeeeEEecCCCcc-----HHHHHHHHhhccch
Confidence            35566667666 666665444 23577888889988887765322 223468888987665     22333333221000


Q ss_pred             hccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh-HHHHHHHHhCcEEEEcCC---CCcC---CccH
Q psy15555        321 ELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY-EDMKKEFSEGLIGLHAMW---NEHF---GIGI  393 (488)
Q Consensus       321 ~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~-~el~~~~~~ad~~v~~s~---~e~~---g~~~  393 (488)
                      ....+-++...|.+       +...+.    ..-..+++.++|+.+. +.+...++..|+.+.-+.   .++.   .+-+
T Consensus       212 kl~v~rr~~~~g~~-------y~~~~~----~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~Rv  280 (373)
T COG4641         212 KLMVDRRFYVLGPR-------YPDDIW----GRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRV  280 (373)
T ss_pred             hhhccceeeecCCc-------cchhhh----cccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhH
Confidence            00012344444433       001111    1112457788888755 899999999997765442   2332   5779


Q ss_pred             HHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHH
Q psy15555        394 VECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNG  472 (488)
Q Consensus       394 lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~  472 (488)
                      .|+++||.|.|+....+.. ..+.++    ..-++..|.+++.+.++.++. .+++++++++.+.+.+ ..|+.+.-+..
T Consensus       281 Feiagc~~~liT~~~~~~e-~~f~pg----k~~iv~~d~kdl~~~~~yll~-h~~erkeiae~~ye~V~~~ht~~~r~~~  354 (373)
T COG4641         281 FEIAGCGGFLITDYWKDLE-KFFKPG----KDIIVYQDSKDLKEKLKYLLN-HPDERKEIAECAYERVLARHTYEERIFK  354 (373)
T ss_pred             HHHhhcCCccccccHHHHH-HhcCCc----hheEEecCHHHHHHHHHHHhc-CcchHHHHHHhhHHHHHHhccHHHHHHH
Confidence            9999999999998877764 777777    556667799999999999999 9999999999999998 88999988888


Q ss_pred             HHHHHHHhhh
Q psy15555        473 FLTFTQPLFK  482 (488)
Q Consensus       473 ~~~~~~~~~~  482 (488)
                      +.+.+..+..
T Consensus       355 ~~~~i~sI~~  364 (373)
T COG4641         355 LLNEIASINI  364 (373)
T ss_pred             HHHHHHHHHH
Confidence            8877776443

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.76  E-value=1.2e-05  Score=73.59  Aligned_cols=225  Identities=12%  Similarity=0.125  Sum_probs=137.8

Q ss_pred             HHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCC-ceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHH
Q psy15555        229 KVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQ  307 (488)
Q Consensus       229 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~-k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~l  307 (488)
                      +.+..+.+.+.++...|++ ++.+...+.+.++... .....|..++...... ......+...-+.+|+....-|-+  
T Consensus       125 rlfy~lRr~aq~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~-~~~~~~~~~ltILvGNSgd~sNnH--  200 (360)
T PF07429_consen  125 RLFYFLRRLAQKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLS-EKNKKNKGKLTILVGNSGDPSNNH--  200 (360)
T ss_pred             hHHHHHHHHHHhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhcc-ccccCCCCceEEEEcCCCCCCccH--
Confidence            3333455567778888876 6788889988886432 3323333355433222 221222345566678777666633  


Q ss_pred             HHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe-cCCChHHHHHHHHhCcEEEEcCC-
Q psy15555        308 LRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK-VNLPYEDMKKEFSEGLIGLHAMW-  385 (488)
Q Consensus       308 l~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~-g~~~~~el~~~~~~ad~~v~~s~-  385 (488)
                      ++++..+++...    .++++ +++-+-...+++|.+++.+..+++--.+++..+ .++|.+|..++++.||++++... 
T Consensus       201 ieaL~~L~~~~~----~~~kI-ivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~R  275 (360)
T PF07429_consen  201 IEALEALKQQFG----DDVKI-IVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNR  275 (360)
T ss_pred             HHHHHHHHHhcC----CCeEE-EEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeech
Confidence            666666665442    46774 445332223568999999999987545577654 68999999999999998888774 


Q ss_pred             CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Q psy15555        386 NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSV  461 (488)
Q Consensus       386 ~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~  461 (488)
                      ..+.| +++=.+.+|+||+.+.......++.+.+     .-+++.    |.+.+.++=+++...|+           +. 
T Consensus       276 QQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~-----ipVlf~~d~L~~~~v~ea~rql~~~dk-----------~~-  337 (360)
T PF07429_consen  276 QQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG-----IPVLFYGDELDEALVREAQRQLANVDK-----------QQ-  337 (360)
T ss_pred             hhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC-----CeEEeccccCCHHHHHHHHHHHhhCcc-----------cc-
Confidence            45555 7888999999999987755554444332     223332    44444444444433221           11 


Q ss_pred             hhcCHHHHHHHHHHHHHHh
Q psy15555        462 DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       462 ~~~s~~~~~~~~~~~~~~~  480 (488)
                      -.|......+.|.+.+.-.
T Consensus       338 iaFf~pny~~~w~~~l~~~  356 (360)
T PF07429_consen  338 IAFFAPNYLQGWRQALRLA  356 (360)
T ss_pred             eeeeCCchHHHHHHHHHHH
Confidence            2366677777777776543

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.73  E-value=4.6e-06  Score=75.77  Aligned_cols=331  Identities=15%  Similarity=0.162  Sum_probs=173.6

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      .+||.|++.+...- |--+.+..++.+|.+.+.+.+|++.++.+....-            +.+.. |+++.+|.-....
T Consensus         9 ~~Ri~~Yshd~~Gl-GHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F------------~~~~g-Vd~V~LPsl~k~~   74 (400)
T COG4671           9 RPRILFYSHDLLGL-GHLRRALRIAHALVEDYLGFDILIISGGPPAGGF------------PGPAG-VDFVKLPSLIKGD   74 (400)
T ss_pred             cceEEEEehhhccc-hHHHHHHHHHHHHhhcccCceEEEEeCCCccCCC------------CCccc-CceEecCceEecC
Confidence            46999877665422 3557888999999999899999999987543211            11122 5555555433222


Q ss_pred             ccCchhHHH---HHHHHHHH-HHHHHHhhhcCCcEEE-ecCCccc---hhhhhhhh--CCCeeEEEEeCCccchHHHHHH
Q psy15555        132 ASLYPYFTL---LGQSIGSM-ILGVEALLSFQPDIYI-DTMGYAF---TYPLFSYI--GGSKVACYIHYPTITKEMLTRV  201 (488)
Q Consensus       132 ~~~~~~~~~---~~~~~~~~-~~~~~~l~~~~pDiii-~~~~~~~---~~~~~~~~--~~~~~v~~~h~p~~~~d~~~~~  201 (488)
                      .+.+.....   ........ -.+....+.++|||+| +..++..   +.|.+...  .+.+.+.-..      |..+-.
T Consensus        75 ~G~~~~~d~~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr------~i~D~p  148 (400)
T COG4671          75 NGEYGLVDLDGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLR------SIRDIP  148 (400)
T ss_pred             CCceeeeecCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehH------hhhhch
Confidence            222211000   00001000 1144567889999765 5543331   12233222  2323333211      111111


Q ss_pred             HhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCC--ceEEEcCCCCchhh-
Q psy15555        202 ARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQL--KTYKLYPPCDTEDL-  278 (488)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~--k~~vi~~~~d~~~~-  278 (488)
                      ....              ....+..       .++.+-++.|.|++..+-.-..+.+.++...  +..+.+-|+-.... 
T Consensus       149 ~~~~--------------~~w~~~~-------~~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~  207 (400)
T COG4671         149 QELE--------------ADWRRAE-------TVRLINRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLP  207 (400)
T ss_pred             hhhc--------------cchhhhH-------HHHHHHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCc
Confidence            1110              0001111       1222334569999998887777777676543  23344444321111 


Q ss_pred             -hccC-CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceE---EEEEecCCCCCcHHHHHHHHHHHHhc
Q psy15555        279 -KKIT-HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLK---LIFIGSTRNEEDEVCVKDMQDLCKHL  353 (488)
Q Consensus       279 -~~~~-~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~---l~ivG~~~~~~~~~~~~~l~~~~~~~  353 (488)
                       .+.+ ...+++..+++.+|.  ..-|.+++-.++.... ..     ++++   +++.|-.-..   .-++++.+.+   
T Consensus       208 ~~~~p~~~~pE~~~Ilvs~GG--G~dG~eLi~~~l~A~~-~l-----~~l~~~~~ivtGP~MP~---~~r~~l~~~A---  273 (400)
T COG4671         208 HLPLPPHEAPEGFDILVSVGG--GADGAELIETALAAAQ-LL-----AGLNHKWLIVTGPFMPE---AQRQKLLASA---  273 (400)
T ss_pred             CCCCCCcCCCccceEEEecCC--ChhhHHHHHHHHHHhh-hC-----CCCCcceEEEeCCCCCH---HHHHHHHHhc---
Confidence             1111 112455677787774  3445444443333322 11     3333   4555543221   2234444444   


Q ss_pred             CCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccce-eccCCCcccccee---c
Q psy15555        354 SLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDI-VIEDPETCRNGFL---A  429 (488)
Q Consensus       354 ~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~ei-v~~~~~~~~~g~~---~  429 (488)
                      +-.++|.+..+.  .++..++..|+..|.-+.    =+++.|=+++|||.+.-+.....+|. +... .-++-|++   .
T Consensus       274 ~~~p~i~I~~f~--~~~~~ll~gA~~vVSm~G----YNTvCeILs~~k~aLivPr~~p~eEQliRA~-Rl~~LGL~dvL~  346 (400)
T COG4671         274 PKRPHISIFEFR--NDFESLLAGARLVVSMGG----YNTVCEILSFGKPALIVPRAAPREEQLIRAQ-RLEELGLVDVLL  346 (400)
T ss_pred             ccCCCeEEEEhh--hhHHHHHHhhheeeeccc----chhhhHHHhCCCceEEeccCCCcHHHHHHHH-HHHhcCcceeeC
Confidence            324689999998  899999999998776432    24789999999999998876655432 2111 11122333   2


Q ss_pred             C---CHHHHHHHHHHHHc
Q psy15555        430 C---DEVEYAQTIKLILH  444 (488)
Q Consensus       430 ~---~~~~l~~~i~~ll~  444 (488)
                      +   +++.|+++|..+++
T Consensus       347 pe~lt~~~La~al~~~l~  364 (400)
T COG4671         347 PENLTPQNLADALKAALA  364 (400)
T ss_pred             cccCChHHHHHHHHhccc
Confidence            2   68899999998887

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=98.72  E-value=6.8e-06  Score=78.13  Aligned_cols=79  Identities=15%  Similarity=0.047  Sum_probs=54.3

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccc-----eeccCCCccccceecC
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMD-----IVIEDPETCRNGFLAC  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~e-----iv~~~~~~~~~g~~~~  430 (488)
                      ++++.+.++.+ +++.++|..||++|..+    +..++.|++++|+|+|..+..+..+.     .+++.    +.|...+
T Consensus       228 ~~~v~~~~~~~-~~~~~~l~~ad~vI~~~----G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~----g~~~~l~  298 (321)
T TIGR00661       228 NENVEIRRITT-DNFKELIKNAELVITHG----GFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL----GCGIALE  298 (321)
T ss_pred             CCCEEEEECCh-HHHHHHHHhCCEEEECC----ChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC----CCEEEcC
Confidence            46899988865 68999999999999854    23468999999999999887654321     23333    5666655


Q ss_pred             --CHHHHHHHHHHHHc
Q psy15555        431 --DEVEYAQTIKLILH  444 (488)
Q Consensus       431 --~~~~l~~~i~~ll~  444 (488)
                        +. ++.+++.+.++
T Consensus       299 ~~~~-~~~~~~~~~~~  313 (321)
T TIGR00661       299 YKEL-RLLEAILDIRN  313 (321)
T ss_pred             hhhH-HHHHHHHhccc
Confidence              33 44444444443

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=98.62  E-value=3.7e-06  Score=81.92  Aligned_cols=160  Identities=13%  Similarity=0.101  Sum_probs=101.4

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      +.+.+.+..|+....   ..+++.+.......      +.++++...+ ..          .  ...++++|+...+++|
T Consensus       236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~l------~~~vi~~~~~-~~----------~--~~~~~p~n~~v~~~~p  293 (406)
T COG1819         236 DRPIVYVSLGTVGNA---VELLAIVLEALADL------DVRVIVSLGG-AR----------D--TLVNVPDNVIVADYVP  293 (406)
T ss_pred             CCCeEEEEcCCcccH---HHHHHHHHHHHhcC------CcEEEEeccc-cc----------c--ccccCCCceEEecCCC
Confidence            345566667766544   34444444444442      6677776643 11          1  2234578999999997


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecC----CHHHHHHHH
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLAC----DEVEYAQTI  439 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~----~~~~l~~~i  439 (488)
                      +.+   ++..||++|..    |+..++.||+.+|+|+|.-+.+.-.   .+.+++.    +.|....    +++.++++|
T Consensus       294 ~~~---~l~~ad~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~----G~G~~l~~~~l~~~~l~~av  362 (406)
T COG1819         294 QLE---LLPRADAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL----GAGIALPFEELTEERLRAAV  362 (406)
T ss_pred             HHH---HhhhcCEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc----CCceecCcccCCHHHHHHHH
Confidence            765   78999999974    4445789999999999997765221   1345555    6776643    899999999


Q ss_pred             HHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        440 KLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       440 ~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      .++++ |+..++...+......+.-.    .+...+.+++...++
T Consensus       363 ~~vL~-~~~~~~~~~~~~~~~~~~~g----~~~~a~~le~~~~~~  402 (406)
T COG1819         363 NEVLA-DDSYRRAAERLAEEFKEEDG----PAKAADLLEEFAREK  402 (406)
T ss_pred             HHHhc-CHHHHHHHHHHHHHhhhccc----HHHHHHHHHHHHhcc
Confidence            99998 77666655544433334433    334444555544433

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.60  E-value=1e-05  Score=78.68  Aligned_cols=214  Identities=13%  Similarity=0.102  Sum_probs=108.7

Q ss_pred             HhcccCEEEEcChhHHHHHHHHhccCC-ceEEEcCCCCchhhhccCC---------CCCCCCeEEEEeeccCCCCCh---
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKKITH---------SKTDGPVKIISVAQFRPEKDH---  304 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~~~~~-k~~vi~~~~d~~~~~~~~~---------~~~~~~~~i~~~g~~~~~k~~---  304 (488)
                      .....|.+++.|+..++.+.+.++.+. ++.+.+.|-....+.....         ....++.+|+|+-+++.....   
T Consensus       131 ~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~  210 (369)
T PF04464_consen  131 NYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYF  210 (369)
T ss_dssp             HHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGS
T ss_pred             hccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccc
Confidence            446779999999999999999887665 5666665532222222111         123456799999876644332   


Q ss_pred             ---H--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHh-cCCCCcEEEecCCChHHHHHHHHhCc
Q psy15555        305 ---P--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH-LSLENNVEFKVNLPYEDMKKEFSEGL  378 (488)
Q Consensus       305 ---~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~-~~l~~~v~~~g~~~~~el~~~~~~ad  378 (488)
                         .  .-++.+.. ...      +++.+++-+ ||         .+...... ....++|.....-  .++.+++..||
T Consensus       211 ~~~~~~~~~~~l~~-~~~------~~~~li~k~-Hp---------~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aD  271 (369)
T PF04464_consen  211 KFFFSDLDFEKLNF-LLK------NNYVLIIKP-HP---------NMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAAD  271 (369)
T ss_dssp             S----TT-HHHHHH-HHT------TTEEEEE---SH---------HHHTT----TT-TTTEEE-TT---S-HHHHHHT-S
T ss_pred             cccccccCHHHHHH-HhC------CCcEEEEEe-Cc---------hhhhchhhhhccCCcEEECCCC--CCHHHHHHhcC
Confidence               1  11333331 222      577777665 43         12222211 2234677777654  58999999999


Q ss_pred             EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC--Cc--cceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        379 IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG--PK--MDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       379 ~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~--~~--~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      ++|.-     ++-.+.|++.+++|||......  ..  .....+. .....|-++.|.++|.++|..++. +++...+..
T Consensus       272 iLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~~~~~  344 (369)
T PF04464_consen  272 ILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLPGPIVYNFEELIEAIENIIE-NPDEYKEKR  344 (369)
T ss_dssp             EEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSSS-EESSHHHHHHHHTTHHH-HHHHTHHHH
T ss_pred             EEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCCCceeCCHHHHHHHHHhhhh-CCHHHHHHH
Confidence            98863     3568999999999999754321  10  0111111 122457778899999999999887 555544433


Q ss_pred             HHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        455 QNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       455 ~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      +...+..-.|.-...++++.+.+
T Consensus       345 ~~~~~~~~~~~Dg~s~eri~~~I  367 (369)
T PF04464_consen  345 EKFRDKFFKYNDGNSSERIVNYI  367 (369)
T ss_dssp             HHHHHHHSTT--S-HHHHHHHHH
T ss_pred             HHHHHHhCCCCCchHHHHHHHHH
Confidence            33343333344445556655544

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PLN02448 UDP-glycosyltransferase family protein

Probab=98.60  E-value=0.00036  Score=69.56  Aligned_cols=360  Identities=12%  Similarity=0.066  Sum_probs=167.0

Q ss_pred             ccccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecc--
Q psy15555         50 NVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR--  127 (488)
Q Consensus        50 ~~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--  127 (488)
                      +.+.+|+++.--  .. |--.-...|++.|..++|++.|+++++.....   .....   .   .... +.+..++..  
T Consensus         8 ~~~~hVvlvp~p--a~-GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~---~i~~~---~---~~~g-i~fv~lp~~~p   74 (459)
T PLN02448          8 TTSCHVVAMPYP--GR-GHINPMMNLCKLLASRKPDILITFVVTEEWLG---LIGSD---P---KPDN-IRFATIPNVIP   74 (459)
T ss_pred             CCCcEEEEECCc--cc-ccHHHHHHHHHHHHcCCCCcEEEEEeCCchHh---Hhhcc---C---CCCC-EEEEECCCCCC
Confidence            445688876422  22 46677889999999874567777776653211   11110   0   0122 666655531  


Q ss_pred             ceeeccCchhHHHHHHHH-HHHHHHHHHhhhc--CCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhh
Q psy15555        128 KFVEASLYPYFTLLGQSI-GSMILGVEALLSF--QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARR  204 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~--~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~  204 (488)
                      ...... ......+.... .....+.+++++.  ++|.|+.....+....++. ..++|.+.+.-.+.............
T Consensus        75 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~-~lgIP~v~f~~~~a~~~~~~~~~~~~  152 (459)
T PLN02448         75 SELVRA-ADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGN-RRNIPVASLWTMSATFFSVFYHFDLL  152 (459)
T ss_pred             Cccccc-cCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHH-HhCCCeEEEEhHHHHHHHHHHHhhhh
Confidence            100001 01111111111 1122333444443  5687775543444444444 78999888776654211111111100


Q ss_pred             h----hcccC----cc---ccc-cC-----ccchhh---hHHHHHHHHHHHHHHhcccCEEEEcChh-HHHHHHHHhcc-
Q psy15555        205 V----ITHNN----SQ---RVA-NN-----PILTSF---KLFYYKVFALLYSHVGKYSDIIMVNSSW-TEEHVIQLWNC-  262 (488)
Q Consensus       205 ~----~~~~~----~~---~~~-~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~-~~~~~~~~~~~-  262 (488)
                      .    .....    ..   .+. ..     .+....   .......+..... ....++.|+++|-+ ....+.+.+.. 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~  231 (459)
T PLN02448        153 PQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFS-WVPKAQYLLFTSFYELEAQAIDALKSK  231 (459)
T ss_pred             hhccCCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHh-hcccCCEEEEccHHHhhHHHHHHHHhh
Confidence            0    00000    00   000 00     000000   0000111111111 23567899999877 33332332211 


Q ss_pred             -CCceEEEcCCCCchh---------hh-------ccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc
Q psy15555        263 -QLKTYKLYPPCDTED---------LK-------KITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN  325 (488)
Q Consensus       263 -~~k~~vi~~~~d~~~---------~~-------~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~  325 (488)
                       +.++..|.+......         ..       ........+..+.+..|+.... ..+.+-+.+..+..       .+
T Consensus       232 ~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~-~~~~~~~~~~~l~~-------~~  303 (459)
T PLN02448        232 FPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSV-SSAQMDEIAAGLRD-------SG  303 (459)
T ss_pred             cCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccC-CHHHHHHHHHHHHh-------CC
Confidence             124566666432100         00       0111122344677777876432 22232233333322       25


Q ss_pred             eEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcE
Q psy15555        326 LKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIM  403 (488)
Q Consensus       326 ~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~Pv  403 (488)
                      ..++++.+.+.       ..+.+..     .+++.+.+++|+.++   ++..++  ||.    .++..+++||+.+|+|+
T Consensus       304 ~~~lw~~~~~~-------~~~~~~~-----~~~~~v~~w~pQ~~i---L~h~~v~~fvt----HgG~nS~~eal~~GvP~  364 (459)
T PLN02448        304 VRFLWVARGEA-------SRLKEIC-----GDMGLVVPWCDQLKV---LCHSSVGGFWT----HCGWNSTLEAVFAGVPM  364 (459)
T ss_pred             CCEEEEEcCch-------hhHhHhc-----cCCEEEeccCCHHHH---hccCccceEEe----cCchhHHHHHHHcCCCE
Confidence            56776665421       1222222     246777899987765   445664  543    34456899999999999


Q ss_pred             EEeCCCCC----ccceeccCCCccccceec---------CCHHHHHHHHHHHHccCH-HHHHHHHHHH
Q psy15555        404 IAHKSGGP----KMDIVIEDPETCRNGFLA---------CDEVEYAQTIKLILHLSQ-DTKTRISQNA  457 (488)
Q Consensus       404 I~~~~~~~----~~eiv~~~~~~~~~g~~~---------~~~~~l~~~i~~ll~~~~-~~~~~~~~~a  457 (488)
                      |+-+..+-    ...+.+..    +.|+-+         -+.+++.+++.+++. ++ +.-+++.+++
T Consensus       365 l~~P~~~DQ~~na~~v~~~~----g~G~~~~~~~~~~~~~~~~~l~~av~~vl~-~~~~~~~~~r~~a  427 (459)
T PLN02448        365 LTFPLFWDQPLNSKLIVEDW----KIGWRVKREVGEETLVGREEIAELVKRFMD-LESEEGKEMRRRA  427 (459)
T ss_pred             EeccccccchhhHHHHHHHh----CceEEEecccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHH
Confidence            99776432    11122221    234433         167899999999997 53 3333444433

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.60  E-value=6.5e-05  Score=67.33  Aligned_cols=286  Identities=13%  Similarity=0.121  Sum_probs=154.7

Q ss_pred             ceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccCchhHHHHHHHHHH
Q psy15555         68 GERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGS  147 (488)
Q Consensus        68 ~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (488)
                      ..+...+++.+|.++  |+++++++.+.+.. .+..+    .|+       +++..+.....     ...-..+.....-
T Consensus        12 hvhfFk~lI~elekk--G~ev~iT~rd~~~v-~~LLd----~yg-------f~~~~Igk~g~-----~tl~~Kl~~~~eR   72 (346)
T COG1817          12 HVHFFKNLIWELEKK--GHEVLITCRDFGVV-TELLD----LYG-------FPYKSIGKHGG-----VTLKEKLLESAER   72 (346)
T ss_pred             hhhHHHHHHHHHHhC--CeEEEEEEeecCcH-HHHHH----HhC-------CCeEeecccCC-----ccHHHHHHHHHHH
Confidence            346788999999999  78999999886542 22332    233       22222222111     0111011111112


Q ss_pred             HHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHH
Q psy15555        148 MILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFY  227 (488)
Q Consensus       148 ~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      .....++...++||+.+.-. .+.+ +-..+.-++|.+.....+.-                            ..    
T Consensus        73 ~~~L~ki~~~~kpdv~i~~~-s~~l-~rvafgLg~psIi~~D~ehA----------------------------~~----  118 (346)
T COG1817          73 VYKLSKIIAEFKPDVAIGKH-SPEL-PRVAFGLGIPSIIFVDNEHA----------------------------EA----  118 (346)
T ss_pred             HHHHHHHHhhcCCceEeecC-Ccch-hhHHhhcCCceEEecCChhH----------------------------HH----
Confidence            23366788899999988632 2222 33333567888876553320                            00    


Q ss_pred             HHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCC----chhhhccC---C--CCCCCCeEEEE----
Q psy15555        228 YKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCD----TEDLKKIT---H--SKTDGPVKIIS----  294 (488)
Q Consensus       228 ~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d----~~~~~~~~---~--~~~~~~~~i~~----  294 (488)
                            ..+.++..||.+++.+....+.+...+..+.++ +-+|++.    ...|.+.+   +  ....+...+++    
T Consensus       119 ------qnkl~~Pla~~ii~P~~~~~~~~~~~G~~p~~i-~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~  191 (346)
T COG1817         119 ------QNKLTLPLADVIITPEAIDEEELLDFGADPNKI-SGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEP  191 (346)
T ss_pred             ------HhhcchhhhhheecccccchHHHHHhCCCccce-ecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeecc
Confidence                  122355678999999998888888877665432 3333321    11122221   0  11122333332    


Q ss_pred             --eeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHH
Q psy15555        295 --VAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKK  372 (488)
Q Consensus       295 --~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~  372 (488)
                        +.-....++.+.+.++++.+.+.         -.+++++.         ++.++..+..   ++++.....  -+-.+
T Consensus       192 ~~A~y~~g~~~~~~~~~li~~l~k~---------giV~ipr~---------~~~~eife~~---~n~i~pk~~--vD~l~  248 (346)
T COG1817         192 WGAHYDNGDRGISVLPDLIKELKKY---------GIVLIPRE---------KEQAEIFEGY---RNIIIPKKA--VDTLS  248 (346)
T ss_pred             ccceeeccccchhhHHHHHHHHHhC---------cEEEecCc---------hhHHHHHhhh---ccccCCccc--ccHHH
Confidence              11122345555567777776543         36777765         3344444432   123222222  34445


Q ss_pred             HHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC--CccceeccCCCccccceecC--CHHHHHHHHHHHHccCHH
Q psy15555        373 EFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG--PKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       373 ~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~--~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~  448 (488)
                      ++--|++.++.+     |.---||+..|+|.|+...|-  ..++...      +.|.++.  |+.+..+...+.+. ++.
T Consensus       249 Llyya~lvig~g-----gTMarEaAlLGtpaIs~~pGkll~vdk~li------e~G~~~~s~~~~~~~~~a~~~l~-~~~  316 (346)
T COG1817         249 LLYYATLVIGAG-----GTMAREAALLGTPAISCYPGKLLAVDKYLI------EKGLLYHSTDEIAIVEYAVRNLK-YRR  316 (346)
T ss_pred             HHhhhheeecCC-----chHHHHHHHhCCceEEecCCccccccHHHH------hcCceeecCCHHHHHHHHHHHhh-chh
Confidence            777788777653     667789999999999987541  1122222      3466654  77776666666666 443

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=98.54  E-value=1.1e-05  Score=68.43  Aligned_cols=176  Identities=15%  Similarity=0.090  Sum_probs=105.1

Q ss_pred             cEEEEeccC--CCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee
Q psy15555         53 KTVAFFHPY--CNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        53 ~rI~~~~~~--~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      .||+++..-  ....||-|+.+.+|+..|.++  ++++.++|........     .      ..... +..++++.+.. 
T Consensus         2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~--g~~v~Vyc~~~~~~~~-----~------~~y~g-v~l~~i~~~~~-   66 (185)
T PF09314_consen    2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSK--GIDVTVYCRSDYYPYK-----E------FEYNG-VRLVYIPAPKN-   66 (185)
T ss_pred             ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcC--CceEEEEEccCCCCCC-----C------cccCC-eEEEEeCCCCC-
Confidence            467777532  235789999999999999988  6777777765433211     0      00022 56666654432 


Q ss_pred             eccCchhHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCC--ccchhhhhhhhC--CCeeEEEEeCCccchHHHHHHHhh
Q psy15555        131 EASLYPYFTLLGQSIGSMILGVEALL--SFQPDIYIDTMG--YAFTYPLFSYIG--GSKVACYIHYPTITKEMLTRVARR  204 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~--~~~~~~~~~~~~--~~~~v~~~h~p~~~~d~~~~~~~~  204 (488)
                        ....   .+...+.++..+.+..+  +.+.||++....  .++..++.+..+  |.|+++..|...         ++ 
T Consensus        67 --g~~~---si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---------Wk-  131 (185)
T PF09314_consen   67 --GSAE---SIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---------WK-  131 (185)
T ss_pred             --CchH---HHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---------hh-
Confidence              1111   11111111122222222  246777764432  345556665443  568888665432         11 


Q ss_pred             hhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCC
Q psy15555        205 VITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCD  274 (488)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d  274 (488)
                                     ...+.....+.+..-|+.+.+.+|.+|+-|+..++++.+.++ ..+..+|++|.|
T Consensus       132 ---------------R~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~IaYGad  185 (185)
T PF09314_consen  132 ---------------RAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIAYGAD  185 (185)
T ss_pred             ---------------hhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEecCCCC
Confidence                           233344455566667888889999999999999999999998 346788988865

>PLN03007 UDP-glucosyltransferase family protein

Probab=98.43  E-value=0.0028  Score=63.56  Aligned_cols=112  Identities=13%  Similarity=0.067  Sum_probs=64.5

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceecc-CCCcccccee-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIE-DPETCRNGFL-  428 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~-~~~~~~~g~~-  428 (488)
                      +.++++.+++|+.+   +++.+++  ||.    .++-++++||+.+|+|+|+.+..+-.   ...+.+ .  .-+.|+- 
T Consensus       344 ~~g~~v~~w~PQ~~---iL~h~~v~~fvt----H~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~--~~G~~~~~  414 (482)
T PLN03007        344 GKGLIIRGWAPQVL---ILDHQATGGFVT----HCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVL--RTGVSVGA  414 (482)
T ss_pred             cCCEEEecCCCHHH---HhccCccceeee----cCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhh--cceeEecc
Confidence            45788899998764   5677764  543    33456899999999999997763221   011111 1  0011210 


Q ss_pred             -------cC--CHHHHHHHHHHHHccCH---H---HHHHHHHHHHHHH-hhcCHHHHHHHHHHHH
Q psy15555        429 -------AC--DEVEYAQTIKLILHLSQ---D---TKTRISQNAVSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       429 -------~~--~~~~l~~~i~~ll~~~~---~---~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~  477 (488)
                             .+  +.+++.+++++++. ++   +   ..+++++.+++.+ +.-|..+-.+++.+.+
T Consensus       415 ~~~~~~~~~~~~~~~l~~av~~~m~-~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~  478 (482)
T PLN03007        415 KKLVKVKGDFISREKVEKAVREVIV-GEEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEEL  478 (482)
T ss_pred             ccccccccCcccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence                   11  78899999999997 64   2   2223344444444 3344444444444443

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.37  E-value=4.5e-05  Score=72.19  Aligned_cols=134  Identities=15%  Similarity=0.175  Sum_probs=77.2

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCC--CChHHHHHHHHHhHHh
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPE--KDHPLQLRAMYQLRQI  317 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~--k~~~~ll~a~~~l~~~  317 (488)
                      +.+|.+++.=++..+.+    +.  ++..++||+-.. .........+++.+.+..|+-..+  +....+++++.++.++
T Consensus       126 k~~d~vl~ifPFE~~~y----g~--~~~~VGhPl~d~-~~~~~~~~~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~  198 (347)
T PRK14089        126 KYCDFLASILPFEVQFY----QS--KATYVGHPLLDE-IKEFKKDLDKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGK  198 (347)
T ss_pred             HHHhhhhccCCCCHHHh----CC--CCEEECCcHHHh-hhhhhhhcCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            44677777666555555    32  467889984322 111111122233444444432221  3345556777777643


Q ss_pred             hhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHH
Q psy15555        318 ISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECM  397 (488)
Q Consensus       318 ~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~  397 (488)
                             ...+++.+...      . +.+++...+.   ..+.+.+     +..++|+.||+.+..|     |.+.+|++
T Consensus       199 -------~~~~~i~~a~~------~-~~i~~~~~~~---~~~~~~~-----~~~~~m~~aDlal~~S-----GT~TLE~a  251 (347)
T PRK14089        199 -------EKILVVPSFFK------G-KDLKEIYGDI---SEFEISY-----DTHKALLEAEFAFICS-----GTATLEAA  251 (347)
T ss_pred             -------CcEEEEeCCCc------H-HHHHHHHhcC---CCcEEec-----cHHHHHHhhhHHHhcC-----cHHHHHHH
Confidence                   24566655431      1 4455544332   2344443     4568999999888877     88888999


Q ss_pred             HcCCcEEEeC
Q psy15555        398 AAGLIMIAHK  407 (488)
Q Consensus       398 a~G~PvI~~~  407 (488)
                      .+|+|.|..-
T Consensus       252 l~g~P~Vv~Y  261 (347)
T PRK14089        252 LIGTPFVLAY  261 (347)
T ss_pred             HhCCCEEEEE
Confidence            9999999844

>KOG3742|consensus

Probab=98.35  E-value=8.7e-06  Score=75.83  Aligned_cols=238  Identities=12%  Similarity=0.145  Sum_probs=146.2

Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC-------------------------CCCC
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS-------------------------KTDG  288 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~-------------------------~~~~  288 (488)
                      +++.....|+.+.++|+-++-....+...+. -.+.|||.+..+|....+-                         .-++
T Consensus       245 ~ERaa~h~AhVFTTVSeITa~EAeHlLkRKP-D~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFdLdk  323 (692)
T KOG3742|consen  245 LERAAAHTAHVFTTVSEITALEAEHLLKRKP-DVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFDLDK  323 (692)
T ss_pred             HHHHhhhhhhhhhhHHHHHHHHHHHHHhcCC-CeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence            4566777888889999887666666554332 3578999988776543210                         1134


Q ss_pred             CeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccC--ceEEEEEecCCCCCcHH------HHHHHHHHHHh-------
Q psy15555        289 PVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWD--NLKLIFIGSTRNEEDEV------CVKDMQDLCKH-------  352 (488)
Q Consensus       289 ~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~--~~~l~ivG~~~~~~~~~------~~~~l~~~~~~-------  352 (488)
                      ..++..+||.+ ..||-+.+++++++|.-...-...|  -+.+.|.+...+.-+.|      -.+++.+.+.+       
T Consensus       324 TlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~Gk  403 (692)
T KOG3742|consen  324 TLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKVGK  403 (692)
T ss_pred             eEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHHHH
Confidence            56778888887 6799999999999986432111111  13455666543222111      11112111110       


Q ss_pred             --------cCCC--------------------------------------------------------Cc--EEEecC-C
Q psy15555        353 --------LSLE--------------------------------------------------------NN--VEFKVN-L  365 (488)
Q Consensus       353 --------~~l~--------------------------------------------------------~~--v~~~g~-~  365 (488)
                              ..++                                                        ++  |+|++. +
T Consensus       404 rifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFL  483 (692)
T KOG3742|consen  404 RIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFL  483 (692)
T ss_pred             HHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHHHh
Confidence                    0111                                                        22  333321 1


Q ss_pred             C------hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC---ccceeccCCCccccc-eecC-----
Q psy15555        366 P------YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP---KMDIVIEDPETCRNG-FLAC-----  430 (488)
Q Consensus       366 ~------~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~---~~eiv~~~~~~~~~g-~~~~-----  430 (488)
                      +      .-+..++.+.|+++|+||.+|++|.++.|.-.+|+|-|+++..|.   .+|.+++. ++  .| ++++     
T Consensus       484 ss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~-~a--yGIYIvDRRfks  560 (692)
T KOG3742|consen  484 SSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDP-QA--YGIYIVDRRFKS  560 (692)
T ss_pred             ccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCc-hh--ceEEEEecccCC
Confidence            1      137778999999999999999999999999999999999998553   34666654 22  34 3343     


Q ss_pred             ---CHHHHHHHHHHHHccCHHHHHHHHHHHH-HHH-hhcCHHHHHHHHHHHH
Q psy15555        431 ---DEVEYAQTIKLILHLSQDTKTRISQNAV-SSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       431 ---~~~~l~~~i~~ll~~~~~~~~~~~~~a~-~~~-~~~s~~~~~~~~~~~~  477 (488)
                         +.++|++-+..+..  ...|+++-++.+ +.+ +-.+|..+...|.+.=
T Consensus       561 ~deSv~qL~~~m~~F~~--qsRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR  610 (692)
T KOG3742|consen  561 PDESVQQLASFMYEFCK--QSRRQRIIQRNRTERLSDLLDWKYLGRYYRKAR  610 (692)
T ss_pred             hhhHHHHHHHHHHHHHH--HHHHHHHHHhcchhhHHHHHhHHHHhHHHHHHH
Confidence               45567777777664  344555555443 333 6778888777766543

>KOG4626|consensus

Probab=98.34  E-value=6.6e-05  Score=73.12  Aligned_cols=180  Identities=13%  Similarity=0.151  Sum_probs=126.7

Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-CcEEEec
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-NNVEFKV  363 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g  363 (488)
                      .+++.+++..+..+  .|--..+++.|..+.++.     |+-.|.+.--..-.   |  +.+++.+.+.|++ ++|.|.+
T Consensus       755 Lp~d~vvf~~FNqL--yKidP~~l~~W~~ILk~V-----PnS~LwllrfPa~g---e--~rf~ty~~~~Gl~p~riifs~  822 (966)
T KOG4626|consen  755 LPEDAVVFCNFNQL--YKIDPSTLQMWANILKRV-----PNSVLWLLRFPAVG---E--QRFRTYAEQLGLEPDRIIFSP  822 (966)
T ss_pred             CCCCeEEEeechhh--hcCCHHHHHHHHHHHHhC-----CcceeEEEeccccc---h--HHHHHHHHHhCCCccceeecc
Confidence            34566666666655  355568899999999988     77666554322111   1  6788889999985 6788888


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----ceeccCCCccccce-ecCCHHHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----DIVIEDPETCRNGF-LACDEVEYAQT  438 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----eiv~~~~~~~~~g~-~~~~~~~l~~~  438 (488)
                      -...+|-.+-++.+|+.+-+....| -.+-.|.+.+|+|+|+-+......    ......    +.|- ++.+.+|..+.
T Consensus       823 va~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~----Gl~hliak~~eEY~~i  897 (966)
T KOG4626|consen  823 VAAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTAL----GLGHLIAKNREEYVQI  897 (966)
T ss_pred             ccchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHc----ccHHHHhhhHHHHHHH
Confidence            7788999999999998887655442 346689999999999965432210    122222    2343 35589999998


Q ss_pred             HHHHHccCHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHhhh
Q psy15555        439 IKLILHLSQDTKTRISQNAVSSV---DRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       439 i~~ll~~~~~~~~~~~~~a~~~~---~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      -.++-. |.+..+++...-+..-   .-|+..+++..+++.|.++-+
T Consensus       898 aV~Lat-d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~  943 (966)
T KOG4626|consen  898 AVRLAT-DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK  943 (966)
T ss_pred             HHHhhc-CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence            889888 9999988887766443   558888888888888876544

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=1e-05  Score=71.22  Aligned_cols=144  Identities=16%  Similarity=0.212  Sum_probs=87.2

Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEE-EecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF-IGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      .+-+++..|..+ .|+  ..++.++.+.+.       ++.+.| +|...+    . .+.+++.++.   .+++.++-.. 
T Consensus       158 ~r~ilI~lGGsD-pk~--lt~kvl~~L~~~-------~~nl~iV~gs~~p----~-l~~l~k~~~~---~~~i~~~~~~-  218 (318)
T COG3980         158 KRDILITLGGSD-PKN--LTLKVLAELEQK-------NVNLHIVVGSSNP----T-LKNLRKRAEK---YPNINLYIDT-  218 (318)
T ss_pred             hheEEEEccCCC-hhh--hHHHHHHHhhcc-------CeeEEEEecCCCc----c-hhHHHHHHhh---CCCeeeEecc-
Confidence            344677777654 466  557888877654       344444 454321    1 2666666665   4578887776 


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecCCHHHHHHHHHHHH
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLACDEVEYAQTIKLIL  443 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll  443 (488)
                       ++|..++..||+.+..     .|.++.|++..|+|.++-....+.   ..-++..+.....|+-. ........+.++.
T Consensus       219 -~dma~LMke~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l-~~~~~~~~~~~i~  291 (318)
T COG3980         219 -NDMAELMKEADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL-KDLAKDYEILQIQ  291 (318)
T ss_pred             -hhHHHHHHhcchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC-chHHHHHHHHHhh
Confidence             8999999999977753     388999999999994443222221   11122110000112222 3455666777788


Q ss_pred             ccCHHHHHHHHHHHH
Q psy15555        444 HLSQDTKTRISQNAV  458 (488)
Q Consensus       444 ~~~~~~~~~~~~~a~  458 (488)
                      + |+..++.+....+
T Consensus       292 ~-d~~~rk~l~~~~~  305 (318)
T COG3980         292 K-DYARRKNLSFGSK  305 (318)
T ss_pred             h-CHHHhhhhhhccc
Confidence            7 8888877766544

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=98.23  E-value=0.0052  Score=58.07  Aligned_cols=329  Identities=12%  Similarity=0.009  Sum_probs=166.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      ||++++..+.....|-|-.+..+...|++..|+.++++.+..+....    +            + +...  ..+.....
T Consensus         1 m~~~L~g~~g~gN~Gdeail~all~~l~~~~~~~~~~~~~~~p~~i~----~------------p-~~~~--~~p~~~~~   61 (385)
T COG2327           1 MKALLLGYYGFGNIGDEAILKALLDMLRRLNPDAKVLVMGRRPPVIV----D------------P-VFLS--ANPEGSAA   61 (385)
T ss_pred             CeeEEEeeecCCCcccHHHHHHHHHHHHhhCcccceeeeecCCcccc----c------------c-eeec--CCcccCch
Confidence            56666544433334677888889999999999999999988752111    0            0 1111  11111112


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhh-hcCCcEEEecC------------Cccch--hhhhhhhCCCeeEEEEeCCccchHH
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALL-SFQPDIYIDTM------------GYAFT--YPLFSYIGGSKVACYIHYPTITKEM  197 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~pDiii~~~------------~~~~~--~~~~~~~~~~~~v~~~h~p~~~~d~  197 (488)
                      ..+++.+.+.+......-...++. -.+.|+++...            .++..  +.++ ...++|++.+-|.-.     
T Consensus        62 ~l~g~~k~v~R~~~k~~~~~~il~~l~~~d~~I~~Gg~l~~d~~~~~~~~~~~~~~~la-~l~~kp~~~~g~svG-----  135 (385)
T COG2327          62 GLNGRVKSVLRRRLKHPGLVSILSALGKADLIIIGGGGLLQDVTSSRSIIYYGGSILLA-RLAGKPTFFFGQSVG-----  135 (385)
T ss_pred             hhhHHHHHHHHHhhccccHHHHHHHhhhCCEEEEcCcccccCccccceehhhHHHHHHH-HHcCCCEEEEeccCC-----
Confidence            222222221111110000001221 23688665331            11111  1122 257888888666321     


Q ss_pred             HHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEc-CCCCch
Q psy15555        198 LTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLY-PPCDTE  276 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~-~~~d~~  276 (488)
                                          ....       ...+++.+..++.++.+++-.+...++++. .+.+  ..... +.+..+
T Consensus       136 --------------------P~~~-------~~s~~~~~~~~~~~s~i~vRD~~S~~llk~-~gi~--a~l~~D~Af~L~  185 (385)
T COG2327         136 --------------------PLKH-------PLSRQLLNYVLGGCSAISVRDPVSYELLKQ-LGIN--ARLVTDPAFLLP  185 (385)
T ss_pred             --------------------CccC-------HHHHHHHHHHhcCCcEEEEecHHhHHHHHH-cCCC--eEeecCcceecc
Confidence                                1111       223345556788899999999999999996 4444  22222 112211


Q ss_pred             hhhccCCC---CCCCCeEEEEeeccCCCCChHH-----HHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHH
Q psy15555        277 DLKKITHS---KTDGPVKIISVAQFRPEKDHPL-----QLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQD  348 (488)
Q Consensus       277 ~~~~~~~~---~~~~~~~i~~~g~~~~~k~~~~-----ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~  348 (488)
                      ...+....   ....+.+.+..-.+.+...-+.     +-++...+....+    ...++.....+..    +...-...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~i~lr~~~~~~t~~~~~~~~v~~~l~~~~~~~~----~~~~i~~~~~~~s----~d~~va~~  257 (385)
T COG2327         186 ASSQNATASDVEAREKTVAITLRGLHPDNTAQRSILKYVNEALDLVERQVK----ALWRITLIDYGAS----DDLAVADA  257 (385)
T ss_pred             cccccccccccccccceEEEEecccCCchhhhHHHHHHHHHHHHHHHHhhh----cceEEEeeecccc----chhHHHHH
Confidence            11111111   1123334444444444322222     2333333312221    3445544444432    22233344


Q ss_pred             HHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        349 LCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       349 ~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                      .+....-.+++.+......+++...+++||++|+.-     =|+++=|++.|+|+|+-.+..-.+.+.++.+   -.++.
T Consensus       258 ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R-----~HsaI~al~~g~p~i~i~Y~~K~~~l~~~~g---l~~~~  329 (385)
T COG2327         258 IAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMR-----LHSAIMALAFGVPAIAIAYDPKVRGLMQDLG---LPGFA  329 (385)
T ss_pred             HHhhcCCccceEeecchHHHHHHHHhccCceEEeeh-----hHHHHHHHhcCCCeEEEeecHHHHHHHHHcC---CCccc
Confidence            444433246777776644478888999999888643     2689999999999999766433334444441   12233


Q ss_pred             cC----CHHHHHHHHHHHHccCHHHHHH
Q psy15555        429 AC----DEVEYAQTIKLILHLSQDTKTR  452 (488)
Q Consensus       429 ~~----~~~~l~~~i~~ll~~~~~~~~~  452 (488)
                      .+    |.+.+.+...+.+...++.+++
T Consensus       330 ~~i~~~~~~~l~~~~~e~~~~~~~~~~~  357 (385)
T COG2327         330 IDIDPLDAEILSAVVLERLTKLDELRER  357 (385)
T ss_pred             ccCCCCchHHHHHHHHHHHhccHHHHhh
Confidence            22    7788888888877745554444

>PLN02764 glycosyltransferase family protein

Probab=98.21  E-value=0.0039  Score=61.37  Aligned_cols=223  Identities=9%  Similarity=-0.007  Sum_probs=116.9

Q ss_pred             hcccCEEEEcChhH-HHHHHHHhcc--CCceEEEcCCCCch-h-------hhccCCCCCCCCeEEEEeeccCCCCChHHH
Q psy15555        239 GKYSDIIMVNSSWT-EEHVIQLWNC--QLKTYKLYPPCDTE-D-------LKKITHSKTDGPVKIISVAQFRPEKDHPLQ  307 (488)
Q Consensus       239 ~~~~d~ii~~s~~~-~~~~~~~~~~--~~k~~vi~~~~d~~-~-------~~~~~~~~~~~~~~i~~~g~~~~~k~~~~l  307 (488)
                      ...++.|+++|=.. ...+.+.+..  ..++..|++-+... .       .-..-...+++..+.+..|+...- ..+.+
T Consensus       197 ~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~-~~~q~  275 (453)
T PLN02764        197 LMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVIL-EKDQF  275 (453)
T ss_pred             hccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeecccccC-CHHHH
Confidence            56788999988443 2222332311  12567776653111 0       001112233456677888887432 33455


Q ss_pred             HHHHHHhHHhhhhhccCceEEEEEec-CCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCC
Q psy15555        308 LRAMYQLRQIISEELWDNLKLIFIGS-TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWN  386 (488)
Q Consensus       308 l~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~  386 (488)
                      -+....|....     .++..++-.. +.........+.+++..+.    ..+...+++|+.++..- ..+++||.    
T Consensus       276 ~ela~gL~~s~-----~pflwv~r~~~~~~~~~~~lp~~f~~r~~g----rG~v~~~W~PQ~~vL~h-~~v~~Fvt----  341 (453)
T PLN02764        276 QELCLGMELTG-----SPFLVAVKPPRGSSTIQEALPEGFEERVKG----RGVVWGGWVQQPLILSH-PSVGCFVS----  341 (453)
T ss_pred             HHHHHHHHhCC-----CCeEEEEeCCCCCcchhhhCCcchHhhhcc----CCcEEeCCCCHHHHhcC-cccCeEEe----
Confidence            55555554433     3444444321 1100000111223333322    34677899988775432 22344654    


Q ss_pred             CcCCccHHHHHHcCCcEEEeCCCCCc---ccee-ccCCCccccceec------C-CHHHHHHHHHHHHccCH-HHHHHHH
Q psy15555        387 EHFGIGIVECMAAGLIMIAHKSGGPK---MDIV-IEDPETCRNGFLA------C-DEVEYAQTIKLILHLSQ-DTKTRIS  454 (488)
Q Consensus       387 e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv-~~~~~~~~~g~~~------~-~~~~l~~~i~~ll~~~~-~~~~~~~  454 (488)
                      .++.++++||+.+|+|+|+-+..+-.   ...+ +..    +.|+.+      . +.+++.++++++++ ++ +..+++.
T Consensus       342 H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~----g~gv~~~~~~~~~~~~e~i~~av~~vm~-~~~~~g~~~r  416 (453)
T PLN02764        342 HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDEL----KVSVEVAREETGWFSKESLRDAINSVMK-RDSEIGNLVK  416 (453)
T ss_pred             cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHh----ceEEEeccccCCccCHHHHHHHHHHHhc-CCchhHHHHH
Confidence            34456899999999999997764321   0222 223    445442      1 77899999999997 54 4455565


Q ss_pred             HHHHHH---H-hhcCHHHHHHHHHHHHHHhh
Q psy15555        455 QNAVSS---V-DRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       455 ~~a~~~---~-~~~s~~~~~~~~~~~~~~~~  481 (488)
                      +++++.   + +.-|.....+++.+.+.+..
T Consensus       417 ~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~  447 (453)
T PLN02764        417 KNHTKWRETLASPGLLTGYVDNFIESLQDLV  447 (453)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Confidence            555433   3 44555555555555555443

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.17  E-value=0.00045  Score=66.57  Aligned_cols=103  Identities=5%  Similarity=-0.029  Sum_probs=64.2

Q ss_pred             CCeEEEEeeccCCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ++.+++..|...+.|...  ...+..+.+.+       .+.++++.|+..+.   +. +..++..+...-...+.+.|..
T Consensus       183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~-------~~~~vvl~ggp~e~---e~-~~~~~i~~~~~~~~~~~l~g~~  251 (352)
T PRK10422        183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA-------RGYEVVLTSGPDKD---DL-ACVNEIAQGCQTPPVTALAGKT  251 (352)
T ss_pred             CCeEEEecCCCccccCCCHHHHHHHHHHHHH-------CCCeEEEEcCCChH---HH-HHHHHHHHhcCCCccccccCCC
Confidence            456777777766677754  45555555543       35677888753211   11 2223333332222345678888


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      +-.|+..+++.||++|+.-   +++  +==|.|.|+|+|+-
T Consensus       252 sL~el~ali~~a~l~v~nD---SGp--~HlAaA~g~P~v~l  287 (352)
T PRK10422        252 TFPELGALIDHAQLFIGVD---SAP--AHIAAAVNTPLICL  287 (352)
T ss_pred             CHHHHHHHHHhCCEEEecC---CHH--HHHHHHcCCCEEEE
Confidence            8899999999999999753   333  33367889999984

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.16  E-value=0.00022  Score=68.00  Aligned_cols=101  Identities=17%  Similarity=0.223  Sum_probs=62.6

Q ss_pred             CCeEEEEee-ccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        288 GPVKIISVA-QFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       288 ~~~~i~~~g-~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      ++.+++..| +....|...  .+-++++.+...+   ...++++.|+..   +.   +..+++.+..+  +.+.+.|..+
T Consensus       175 ~~~i~i~pg~s~~~~K~wp--~e~~~~l~~~l~~---~~~~Vvl~g~~~---e~---e~~~~i~~~~~--~~~~l~~k~s  241 (334)
T COG0859         175 RPYIVINPGASRGSAKRWP--LEHYAELAELLIA---KGYQVVLFGGPD---EE---ERAEEIAKGLP--NAVILAGKTS  241 (334)
T ss_pred             CCeEEEeccccccccCCCC--HHHHHHHHHHHHH---CCCEEEEecChH---HH---HHHHHHHHhcC--CccccCCCCC
Confidence            356677777 444777754  3344443332211   236788888662   22   33444444432  2333888889


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      -.|+..+++.||++|++.   ++  .+==|.|.|+|+|+-
T Consensus       242 L~e~~~li~~a~l~I~~D---Sg--~~HlAaA~~~P~I~i  276 (334)
T COG0859         242 LEELAALIAGADLVIGND---SG--PMHLAAALGTPTIAL  276 (334)
T ss_pred             HHHHHHHHhcCCEEEccC---Ch--HHHHHHHcCCCEEEE
Confidence            999999999999988764   22  233478889999994

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.09  E-value=0.0001  Score=60.51  Aligned_cols=136  Identities=16%  Similarity=0.122  Sum_probs=77.3

Q ss_pred             EEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeecc
Q psy15555         54 TVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEAS  133 (488)
Q Consensus        54 rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  133 (488)
                      ||+++....      +....+++++|.++  |++|.+.+...+...  ....          .+ +.+..++....   .
T Consensus         1 KIl~i~~~~------~~~~~~~~~~L~~~--g~~V~ii~~~~~~~~--~~~~----------~~-i~~~~~~~~~k---~   56 (139)
T PF13477_consen    1 KILLIGNTP------STFIYNLAKELKKR--GYDVHIITPRNDYEK--YEII----------EG-IKVIRLPSPRK---S   56 (139)
T ss_pred             CEEEEecCc------HHHHHHHHHHHHHC--CCEEEEEEcCCCchh--hhHh----------CC-eEEEEecCCCC---c
Confidence            567765442      34678999999998  555555555433211  1111          22 55555543211   1


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCcc-chhh-hhhhhCC-CeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        134 LYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYA-FTYP-LFSYIGG-SKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~-~~~~-~~~~~~~-~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                      ....       +. .....+.+++.+||+||.+...+ ..++ +++...+ +|++...|...+..               
T Consensus        57 ~~~~-------~~-~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~---------------  113 (139)
T PF13477_consen   57 PLNY-------IK-YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN---------------  113 (139)
T ss_pred             cHHH-------HH-HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec---------------
Confidence            1111       12 23567889999999999887655 3333 3333455 89999888543100               


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcC
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNS  249 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s  249 (488)
                            +   ...    .+...++.+.+++++|.++++|
T Consensus       114 ------~---~~~----~~~~~~~~~~~~k~~~~ii~~~  139 (139)
T PF13477_consen  114 ------S---SKK----KKLKKFIIKFAFKRADKIIVQS  139 (139)
T ss_pred             ------C---Cch----HHHHHHHHHHHHHhCCEEEEcC
Confidence                  0   000    1133446677889999999986

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=98.03  E-value=0.0005  Score=63.97  Aligned_cols=100  Identities=11%  Similarity=0.090  Sum_probs=60.5

Q ss_pred             eEEEEeeccCCCCCh--HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        290 VKIISVAQFRPEKDH--PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       290 ~~i~~~g~~~~~k~~--~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      .+++..|...+.|..  +...+..+.+.++       +.++++.|...+.      +..++..+..+-...+.+.|..+-
T Consensus       123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~-------~~~ivl~g~~~e~------~~~~~i~~~~~~~~~~~~~~~~~l  189 (279)
T cd03789         123 VVVLPPGASGPAKRWPAERFAALADRLLAR-------GARVVLTGGPAER------ELAEEIAAALGGPRVVNLAGKTSL  189 (279)
T ss_pred             EEEECCCCCCccccCCHHHHHHHHHHHHHC-------CCEEEEEechhhH------HHHHHHHHhcCCCccccCcCCCCH
Confidence            344444444444443  4555555555542       5688888864321      333444443321234556777788


Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeC
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHK  407 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~  407 (488)
                      .|+..+++.||++|.+.   + | .+--|.+.|+|+|+--
T Consensus       190 ~e~~~li~~~~l~I~~D---s-g-~~HlA~a~~~p~i~l~  224 (279)
T cd03789         190 RELAALLARADLVVTND---S-G-PMHLAAALGTPTVALF  224 (279)
T ss_pred             HHHHHHHHhCCEEEeeC---C-H-HHHHHHHcCCCEEEEE
Confidence            99999999999999863   1 2 3334469999999843

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02208 glycosyltransferase family protein

Probab=98.01  E-value=0.019  Score=56.71  Aligned_cols=220  Identities=10%  Similarity=-0.025  Sum_probs=112.7

Q ss_pred             HhcccCEEEEcChhHH-HHHHHHhccC--CceEEEcCCCC-ch-------hhhccCCCCCCCCeEEEEeeccCCCCChHH
Q psy15555        238 VGKYSDIIMVNSSWTE-EHVIQLWNCQ--LKTYKLYPPCD-TE-------DLKKITHSKTDGPVKIISVAQFRPEKDHPL  306 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~-~~~~~~~~~~--~k~~vi~~~~d-~~-------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~  306 (488)
                      ....+|.|+++|=... ..+.+.+..+  .++..|++-.. .+       .....-.....+..+.+..|+... -..+.
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~-l~~~q  268 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQII-LEKDQ  268 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEecccccc-CCHHH
Confidence            4567899999885443 2333333211  35666665421 11       000000112234567777787653 23344


Q ss_pred             HHHHHHHhHHhhhhhccCceEEEEEec-CCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC
Q psy15555        307 QLRAMYQLRQIISEELWDNLKLIFIGS-TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW  385 (488)
Q Consensus       307 ll~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~  385 (488)
                      +.+.+..+....     -+..+++-.. +........-+.+.+..+    ..++.+.++.|+.++   ++...+..+-+ 
T Consensus       269 ~~e~~~~l~~s~-----~pf~wv~r~~~~~~~~~~~lp~~f~~r~~----~~g~~v~~W~PQ~~i---L~H~~v~~Fvt-  335 (442)
T PLN02208        269 FQELCLGMELTG-----LPFLIAVKPPRGSSTVQEGLPEGFEERVK----GRGVVWGGWVQQPLI---LDHPSIGCFVN-  335 (442)
T ss_pred             HHHHHHHHHhCC-----CcEEEEEeCCCcccchhhhCCHHHHHHHh----cCCcEeeccCCHHHH---hcCCccCeEEc-
Confidence            556555542221     2344444311 100000011123333333    246778899988764   55665433322 


Q ss_pred             CCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC-------CHHHHHHHHHHHHccCH-HHHHHH
Q psy15555        386 NEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC-------DEVEYAQTIKLILHLSQ-DTKTRI  453 (488)
Q Consensus       386 ~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~-------~~~~l~~~i~~ll~~~~-~~~~~~  453 (488)
                       .++-++++||+++|+|+|+-+..+    +..-+++..    +.|..++       +.+++.+++.++++ ++ +..+++
T Consensus       336 -HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~----g~gv~~~~~~~~~~~~~~l~~ai~~~m~-~~~e~g~~~  409 (442)
T PLN02208        336 -HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEF----EVSVEVSREKTGWFSKESLSNAIKSVMD-KDSDLGKLV  409 (442)
T ss_pred             -cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHh----ceeEEeccccCCcCcHHHHHHHHHHHhc-CCchhHHHH
Confidence             233468999999999999977643    211122223    4555442       67899999999997 54 445566


Q ss_pred             HHHHHHH---H-hhcCHHHHHHHHHHHH
Q psy15555        454 SQNAVSS---V-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       454 ~~~a~~~---~-~~~s~~~~~~~~~~~~  477 (488)
                      .+++++.   + +.-|..+..+++.+-+
T Consensus       410 r~~~~~~~~~~~~~gsS~~~l~~~v~~l  437 (442)
T PLN02208        410 RSNHTKLKEILVSPGLLTGYVDKFVEEL  437 (442)
T ss_pred             HHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence            6655433   2 3344444444444433

>PLN02670 transferase, transferring glycosyl groups

Probab=98.01  E-value=0.021  Score=56.83  Aligned_cols=108  Identities=12%  Similarity=0.113  Sum_probs=67.1

Q ss_pred             cEEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC-
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      .+++.+++|+.++   ++...+  ||.    .++-++++||+++|+|+|+.+..+    +. ..+...    +.|+.++ 
T Consensus       340 G~vv~~W~PQ~~I---L~H~~v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na-~~v~~~----g~Gv~l~~  407 (472)
T PLN02670        340 GMIHVGWVPQVKI---LSHESVGGFLT----HCGWNSVVEGLGFGRVLILFPVLNEQGLNT-RLLHGK----KLGLEVPR  407 (472)
T ss_pred             CeEEeCcCCHHHH---hcCcccceeee----cCCcchHHHHHHcCCCEEeCcchhccHHHH-HHHHHc----CeeEEeec
Confidence            3777899988764   555554  443    344578999999999999977632    22 233333    5665542 


Q ss_pred             -------CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHHHHH
Q psy15555        431 -------DEVEYAQTIKLILHLSQDTKTRISQNAVSSV----DRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       431 -------~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~----~~~s~~~~~~~~~~~~~~  479 (488)
                             +.+++.+++.+++. +++ -.++.+++++..    ++=..+..++.+.+.+.+
T Consensus       408 ~~~~~~~~~e~i~~av~~vm~-~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~  465 (472)
T PLN02670        408 DERDGSFTSDSVAESVRLAMV-DDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRE  465 (472)
T ss_pred             cccCCcCcHHHHHHHHHHHhc-Ccc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence                   58899999999997 542 234445554444    334444455555444443

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=97.95  E-value=0.0015  Score=62.01  Aligned_cols=99  Identities=9%  Similarity=0.007  Sum_probs=62.9

Q ss_pred             CCeEEEEeeccCCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ++.+++..|.-...|...  ...+....+.+       .+.++++.|+++.     ..+..++..+..+   +..+.|..
T Consensus       179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~-------~~~~~vl~~g~~~-----e~~~~~~i~~~~~---~~~l~g~~  243 (319)
T TIGR02193       179 APYAVLLHATSRDDKTWPEERWRELARLLLA-------RGLQIVLPWGNDA-----EKQRAERIAEALP---GAVVLPKM  243 (319)
T ss_pred             CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH-------CCCeEEEeCCCHH-----HHHHHHHHHhhCC---CCeecCCC
Confidence            456777777666777764  44455555543       2567777765542     1133344443322   23567888


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      +-.|+..+++.||++|+.-   ++++-  =|.|.|+|+|+-
T Consensus       244 sL~el~ali~~a~l~I~~D---Sgp~H--lAaa~g~P~i~l  279 (319)
T TIGR02193       244 SLAEVAALLAGADAVVGVD---TGLTH--LAAALDKPTVTL  279 (319)
T ss_pred             CHHHHHHHHHcCCEEEeCC---ChHHH--HHHHcCCCEEEE
Confidence            8899999999999999853   33333  356889999984

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=97.94  E-value=0.0039  Score=59.28  Aligned_cols=98  Identities=15%  Similarity=0.042  Sum_probs=59.2

Q ss_pred             CeEEEEeeccCCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        289 PVKIISVAQFRPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      +.+++..|.....|...  ...+....+.+       .+.++++.++++.+     .+..++..+.   ..++.+.|..+
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~-------~~~~ivl~~G~~~e-----~~~~~~i~~~---~~~~~l~g~~s  243 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAP-------SGLRIKLPWGAEHE-----EQRAKRLAEG---FPYVEVLPKLS  243 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHH-------CCCeEEEeCCCHHH-----HHHHHHHHcc---CCcceecCCCC
Confidence            44444455444556654  45555555543       25567776434321     1333333332   13466778888


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      -.|+..+++.||++|+..   ++  .+==|.|+|+|+|+-
T Consensus       244 L~elaali~~a~l~I~nD---SG--p~HlA~A~g~p~val  278 (322)
T PRK10964        244 LEQVARVLAGAKAVVSVD---TG--LSHLTAALDRPNITL  278 (322)
T ss_pred             HHHHHHHHHhCCEEEecC---Cc--HHHHHHHhCCCEEEE
Confidence            899999999999999853   22  334478889999993

>PLN02210 UDP-glucosyl transferase

Probab=97.94  E-value=0.028  Score=55.91  Aligned_cols=105  Identities=13%  Similarity=0.006  Sum_probs=65.9

Q ss_pred             cEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---ceecc-CCCccccceecC-
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---DIVIE-DPETCRNGFLAC-  430 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---eiv~~-~~~~~~~g~~~~-  430 (488)
                      +..+.+++|+.+   +++.+.  +||.    .++-.+++|++.+|+|+|+-+..+-..   ..+.+ .    +.|..+. 
T Consensus       325 ~g~v~~w~PQ~~---iL~h~~vg~Fit----H~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~----g~G~~l~~  393 (456)
T PLN02210        325 QGVVLEWSPQEK---ILSHMAISCFVT----HCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVF----GIGVRMRN  393 (456)
T ss_pred             CeEEEecCCHHH---HhcCcCcCeEEe----eCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHh----CeEEEEec
Confidence            345679998765   567776  5553    233458999999999999977643210   22222 3    4565541 


Q ss_pred             -------CHHHHHHHHHHHHccCHH------HHHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        431 -------DEVEYAQTIKLILHLSQD------TKTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       431 -------~~~~l~~~i~~ll~~~~~------~~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                             +.+++.+++++++. +++      ..+++++.+++.+ +.-|..+-.+++.
T Consensus       394 ~~~~~~~~~~~l~~av~~~m~-~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v  450 (456)
T PLN02210        394 DAVDGELKVEEVERCIEAVTE-GPAAADIRRRAAELKHVARLALAPGGSSARNLDLFI  450 (456)
T ss_pred             cccCCcCCHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence                   67899999999997 543      3334555566555 5555554444443

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.89  E-value=5.5e-07  Score=76.76  Aligned_cols=90  Identities=16%  Similarity=0.138  Sum_probs=61.1

Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc----c---ceeccCCCccccceec
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK----M---DIVIEDPETCRNGFLA  429 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~----~---eiv~~~~~~~~~g~~~  429 (488)
                      .+|.+.++.  +++.++|+.||++|.-    +++.++.|++++|+|.|.-+..+..    .   ..+.+.    ..+...
T Consensus        55 ~~v~~~~~~--~~m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~----g~~~~~  124 (167)
T PF04101_consen   55 PNVKVFGFV--DNMAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK----GAAIML  124 (167)
T ss_dssp             CCCEEECSS--SSHHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC----CCCCCS
T ss_pred             CcEEEEech--hhHHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc----CCcccc
Confidence            579999998  7899999999988863    4467999999999999987775521    0   112222    344443


Q ss_pred             C----CHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy15555        430 C----DEVEYAQTIKLILHLSQDTKTRISQNA  457 (488)
Q Consensus       430 ~----~~~~l~~~i~~ll~~~~~~~~~~~~~a  457 (488)
                      .    ++++|.++|.+++. ++..+.++.+++
T Consensus       125 ~~~~~~~~~L~~~i~~l~~-~~~~~~~~~~~~  155 (167)
T PF04101_consen  125 DESELNPEELAEAIEELLS-DPEKLKEMAKAA  155 (167)
T ss_dssp             ECCC-SCCCHHHHHHCHCC-CHH-SHHHCCCH
T ss_pred             CcccCCHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence            2    57889999999998 887766665553

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=97.84  E-value=0.0064  Score=58.45  Aligned_cols=103  Identities=7%  Similarity=0.023  Sum_probs=61.8

Q ss_pred             CCeEEEEeeccCCCCCh--HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDH--PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~--~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +..+++..|.-.+.|..  +...+.++.+.+       .+..+++.|+.. +.+.   +..++..+..+-+..+.+.|..
T Consensus       181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~-------~~~~ivl~g~p~-~~e~---~~~~~i~~~~~~~~~~~l~g~~  249 (344)
T TIGR02201       181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHA-------RGYEVVLTSGPD-KDEL---AMVNEIAQGCQTPRVTSLAGKL  249 (344)
T ss_pred             CCEEEEeCCCCccccCCCHHHHHHHHHHHHh-------CCCeEEEecCCC-HHHH---HHHHHHHhhCCCCcccccCCCC
Confidence            34566677765566664  344444444432       356788888532 1111   2223333322222235578888


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      +-.|+..+++.||++|+.   ++++  +==|.|.|+|+|+-
T Consensus       250 sL~el~ali~~a~l~Vs~---DSGp--~HlAaA~g~p~v~L  285 (344)
T TIGR02201       250 TLPQLAALIDHARLFIGV---DSVP--MHMAAALGTPLVAL  285 (344)
T ss_pred             CHHHHHHHHHhCCEEEec---CCHH--HHHHHHcCCCEEEE
Confidence            889999999999999986   3333  33467889999983

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=97.81  E-value=0.0016  Score=62.70  Aligned_cols=100  Identities=12%  Similarity=0.059  Sum_probs=60.6

Q ss_pred             CCeEEEEeecc-CCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCC---CCcEEE
Q psy15555        288 GPVKIISVAQF-RPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSL---ENNVEF  361 (488)
Q Consensus       288 ~~~~i~~~g~~-~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l---~~~v~~  361 (488)
                      +..+.+..|.- .+.|...  .+.+..+.+.+       .++++++.|+..+.      +..++..+..+-   ...+.+
T Consensus       180 ~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~-------~~~~vvl~Gg~~e~------~~~~~i~~~~~~~~~~~~~~l  246 (348)
T PRK10916        180 RPIIGFCPGAEFGPAKRWPHYHYAELAQQLID-------EGYQVVLFGSAKDH------EAGNEILAALNTEQQAWCRNL  246 (348)
T ss_pred             CCEEEEeCCCCCccccCCCHHHHHHHHHHHHH-------CCCeEEEEeCHHhH------HHHHHHHHhcccccccceeec
Confidence            34566677654 3566653  34444444432       36788888864321      223333333221   112556


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEE
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA  405 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~  405 (488)
                      .|..+-.|+..+++.||++|+.-   ++++  ==|.|.|+|+|+
T Consensus       247 ~g~~sL~el~ali~~a~l~I~nD---TGp~--HlAaA~g~P~va  285 (348)
T PRK10916        247 AGETQLEQAVILIAACKAIVTND---SGLM--HVAAALNRPLVA  285 (348)
T ss_pred             cCCCCHHHHHHHHHhCCEEEecC---ChHH--HHHHHhCCCEEE
Confidence            78778899999999999999753   3332  346788999998

>PLN02562 UDP-glycosyltransferase

Probab=97.76  E-value=0.054  Score=53.81  Aligned_cols=87  Identities=10%  Similarity=0.037  Sum_probs=58.5

Q ss_pred             CCcEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceec
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLA  429 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~  429 (488)
                      ++++.+.+++|+.++   ++..+  +||.    .++-.+++||+.+|+|+|+.+..+-    ...+.+..    +.|+-+
T Consensus       327 ~~~~~v~~w~PQ~~i---L~h~~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~----g~g~~~  395 (448)
T PLN02562        327 SKQGKVVSWAPQLEV---LKHQAVGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVW----KIGVRI  395 (448)
T ss_pred             ccCEEEEecCCHHHH---hCCCccceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHh----CceeEe
Confidence            457888899988765   55555  4443    3345689999999999999776432    11122222    455555


Q ss_pred             C--CHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        430 C--DEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       430 ~--~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      .  +.+++++++++++. +++.+++..
T Consensus       396 ~~~~~~~l~~~v~~~l~-~~~~r~~a~  421 (448)
T PLN02562        396 SGFGQKEVEEGLRKVME-DSGMGERLM  421 (448)
T ss_pred             CCCCHHHHHHHHHHHhC-CHHHHHHHH
Confidence            3  78999999999998 766555443

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.74  E-value=0.056  Score=53.49  Aligned_cols=82  Identities=16%  Similarity=0.033  Sum_probs=53.6

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~~-  430 (488)
                      .+++.+.+++|+.+   +++...+..+-+  .++.++++||+++|+|+|+-+..+.    ..-+++..    +.|+-+. 
T Consensus       316 ~~~~~i~~W~PQ~~---iL~H~~v~~Fvt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~----g~Gv~v~~  386 (449)
T PLN02173        316 KDKSLVLKWSPQLQ---VLSNKAIGCFMT--HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVW----KVGVRVKA  386 (449)
T ss_pred             CCceEEeCCCCHHH---HhCCCccceEEe--cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHh----CceEEEee
Confidence            35688889998765   566666333222  3456799999999999999776332    11122221    2344331 


Q ss_pred             -------CHHHHHHHHHHHHccCH
Q psy15555        431 -------DEVEYAQTIKLILHLSQ  447 (488)
Q Consensus       431 -------~~~~l~~~i~~ll~~~~  447 (488)
                             +.+++.+++.+++. ++
T Consensus       387 ~~~~~~~~~e~v~~av~~vm~-~~  409 (449)
T PLN02173        387 EKESGIAKREEIEFSIKEVME-GE  409 (449)
T ss_pred             cccCCcccHHHHHHHHHHHhc-CC
Confidence                   57999999999997 53

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.68  E-value=0.01  Score=56.80  Aligned_cols=99  Identities=10%  Similarity=0.072  Sum_probs=61.0

Q ss_pred             CCeEEEEeecc-CCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        288 GPVKIISVAQF-RPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       288 ~~~~i~~~g~~-~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ++.+++..|.- .+.|...  ...+..+.+.+       .+.++++.|...+.   +.   .++..+..+ ...+.+.|.
T Consensus       174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~-------~~~~ivl~G~~~e~---~~---~~~i~~~~~-~~~~~l~g~  239 (334)
T TIGR02195       174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLID-------QGYQVVLFGSAKDH---PA---GNEIEALLP-GELRNLAGE  239 (334)
T ss_pred             CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH-------CCCEEEEEEChhhH---HH---HHHHHHhCC-cccccCCCC
Confidence            45566676663 4667654  44555555543       25678888865321   22   333333222 122346788


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEE
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA  405 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~  405 (488)
                      .+-.|+..+++.||++|+.-   +++  +==|.|.|+|+|+
T Consensus       240 ~sL~el~ali~~a~l~I~~D---SGp--~HlAaA~~~P~i~  275 (334)
T TIGR02195       240 TSLDEAVDLIALAKAVVTND---SGL--MHVAAALNRPLVA  275 (334)
T ss_pred             CCHHHHHHHHHhCCEEEeeC---CHH--HHHHHHcCCCEEE
Confidence            88899999999999999753   222  2346788999998

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PLN02554 UDP-glycosyltransferase family protein

Probab=97.68  E-value=0.078  Score=53.30  Aligned_cols=110  Identities=15%  Similarity=0.025  Sum_probs=63.2

Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceec---
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLA---  429 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~---  429 (488)
                      +++.+.+++|+.++..- ..+++||.    .++-.+++||+.+|+|+|+.+..+    +...+++..    +.|..+   
T Consensus       342 ~~g~v~~W~PQ~~iL~H-~~v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~----g~Gv~l~~~  412 (481)
T PLN02554        342 DIGKVIGWAPQVAVLAK-PAIGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEEL----GLAVEIRKY  412 (481)
T ss_pred             cCceEEeeCCHHHHhCC-cccCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHh----CceEEeecc
Confidence            56677899987765321 33444553    334568999999999999977642    211223333    344432   


Q ss_pred             -----------C-CHHHHHHHHHHHHccCHHHHHH---HHHHHHHHH-hhcCHHHHHHHHHH
Q psy15555        430 -----------C-DEVEYAQTIKLILHLSQDTKTR---ISQNAVSSV-DRFSMEEFKNGFLT  475 (488)
Q Consensus       430 -----------~-~~~~l~~~i~~ll~~~~~~~~~---~~~~a~~~~-~~~s~~~~~~~~~~  475 (488)
                                 . +.+++.+++.+++..+++.+++   +++.+++.+ +.-|..+-.+++.+
T Consensus       413 ~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~  474 (481)
T PLN02554        413 WRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQ  474 (481)
T ss_pred             ccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence                       1 7889999999999524433333   333344443 33444443344433

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=97.61  E-value=0.047  Score=51.25  Aligned_cols=155  Identities=16%  Similarity=0.104  Sum_probs=88.9

Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-CchhhhccCCCCCCCCeEEEEeeccC--CCCChHHHHHH
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKITHSKTDGPVKIISVAQFR--PEKDHPLQLRA  310 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~~~~~~~~~~~i~~~g~~~--~~k~~~~ll~a  310 (488)
                      +.+.+++++|.+.+-.+...+.+++. +.  ++.+.+.+. ..+..........+++.+.+.+....  .++..+.+.++
T Consensus       120 ~~~~~l~~~~~i~vRD~~S~~~l~~~-g~--~i~~~~D~a~~l~~~~~~~~~~~~~~~i~i~~r~~~~~~~~~~~~l~~~  196 (298)
T TIGR03609       120 LVRRVLRGCRAISVRDAASYRLLKRL-GI--PAELAADPVWLLPPEPWPGGEPLPEPVIVVSLRPWPLLDVSRLLRLLRA  196 (298)
T ss_pred             HHHHHHccCCEEEEeCHHHHHHHHHh-CC--CceEeCChhhhCCCCcccccccCCCCeEEEEECCCCcCCHHHHHHHHHH
Confidence            45567899999999999989888775 43  355555431 11100000011112233333333221  11224456677


Q ss_pred             HHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCC
Q psy15555        311 MYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFG  390 (488)
Q Consensus       311 ~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g  390 (488)
                      +..+.++.      +.++++++.+.. .|.+..+++.+   ...-+..+.  ...+.+|+..+++.||++|....     
T Consensus       197 l~~l~~~~------g~~v~~i~~~~~-~D~~~~~~l~~---~~~~~~~i~--~~~~~~e~~~~i~~~~~vI~~Rl-----  259 (298)
T TIGR03609       197 LDRLQRDT------GAFVLFLPFQQP-QDLPLARALRD---QLLGPAEVL--SPLDPEELLGLFASARLVIGMRL-----  259 (298)
T ss_pred             HHHHHHhh------CCeEEEEeCCcc-hhHHHHHHHHH---hcCCCcEEE--ecCCHHHHHHHHhhCCEEEEech-----
Confidence            77776653      566767775432 22233333333   332123332  44566899999999998887653     


Q ss_pred             ccHHHHHHcCCcEEEeCC
Q psy15555        391 IGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       391 ~~~lEa~a~G~PvI~~~~  408 (488)
                      |..+=|+.+|+|+|+-..
T Consensus       260 H~~I~A~~~gvP~i~i~y  277 (298)
T TIGR03609       260 HALILAAAAGVPFVALSY  277 (298)
T ss_pred             HHHHHHHHcCCCEEEeec
Confidence            689999999999998643

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=97.57  E-value=0.11  Score=51.94  Aligned_cols=114  Identities=11%  Similarity=0.032  Sum_probs=69.9

Q ss_pred             CcEEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---ccee-ccCCCccccceecC
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIV-IEDPETCRNGFLAC  430 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv-~~~~~~~~~g~~~~  430 (488)
                      .++++.+++|+.++   ++...+  ||.    .++.++++||+.+|+|+|+-+..+-.   ...+ +..    +.|...+
T Consensus       338 rg~vv~~W~PQ~~i---L~h~~vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~----g~gv~~~  406 (481)
T PLN02992        338 RGFVVPSWAPQAEI---LAHQAVGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDEL----GIAVRSD  406 (481)
T ss_pred             CCEEEeecCCHHHH---hCCcccCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHh----CeeEEec
Confidence            35888899988765   555554  443    34456899999999999997764321   0222 233    4555441


Q ss_pred             ------CHHHHHHHHHHHHccCH------HHHHHHHHHHHHHHh---hcCHHHHHHHHHHHHHHhhh
Q psy15555        431 ------DEVEYAQTIKLILHLSQ------DTKTRISQNAVSSVD---RFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       431 ------~~~~l~~~i~~ll~~~~------~~~~~~~~~a~~~~~---~~s~~~~~~~~~~~~~~~~~  482 (488)
                            +.+++.+++.+++. ++      +..+++++.+++.+.   .-|..+-.+++.+.+...+.
T Consensus       407 ~~~~~~~~~~l~~av~~vm~-~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~~~~  472 (481)
T PLN02992        407 DPKEVISRSKIEALVRKVMV-EEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQRFLE  472 (481)
T ss_pred             CCCCcccHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHH
Confidence                  67899999999997 53      233344444555442   34555555555555554443

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=97.51  E-value=0.0033  Score=52.68  Aligned_cols=106  Identities=12%  Similarity=0.065  Sum_probs=67.6

Q ss_pred             cCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHH
Q psy15555        158 FQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSH  237 (488)
Q Consensus       158 ~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (488)
                      +.||||+.+.+|...+.+-....++|++.|+-+-+...         ....+....+    -.+.......+......-.
T Consensus        65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~---------g~d~~FDpe~----p~~~~~~~~~r~rN~~~l~  131 (171)
T PF12000_consen   65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS---------GADVGFDPEF----PPSLDDRARLRMRNAHNLL  131 (171)
T ss_pred             CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC---------CCcCCCCCCC----CCCHHHHHHHHHHhHHHHH
Confidence            56999999999999887766678999998875421100         0000000000    0111112222222223335


Q ss_pred             HhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhh
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL  278 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~  278 (488)
                      .+..+|..++.|.+.++.+-..+.  +|+.|++-|+|++.+
T Consensus       132 ~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  132 ALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF  170 (171)
T ss_pred             HHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence            667899999999999999988665  579999999998764

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=97.33  E-value=0.0032  Score=57.02  Aligned_cols=132  Identities=14%  Similarity=0.079  Sum_probs=69.2

Q ss_pred             EEEEeccCCC---CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHh---hhhcc--------ccc-----
Q psy15555         54 TVAFFHPYCN---AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRA---HQRFN--------IVL-----  114 (488)
Q Consensus        54 rI~~~~~~~~---~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~--------~~~-----  114 (488)
                      ||++++..+.   ..||...++..|.++|+++  |++|.+.+...+.    ..+..   .....        +++     
T Consensus         1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~--G~~V~Vi~P~y~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   74 (245)
T PF08323_consen    1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQ--GHDVRVIMPKYGF----IDEEYFQLEPVRRLSVPFGGPVPVGVWYE   74 (245)
T ss_dssp             EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHT--T-EEEEEEE-THH----HHHHCTTEEEEEEES-STTCEEEEE----
T ss_pred             CEEEEEcccCcccccCcHhHHHHHHHHHHHhc--CCeEEEEEccchh----hhhhhhcceEEEEeccccccccccccceE
Confidence            6888875443   5678889999999999999  5666666665321    11111   00000        000     


Q ss_pred             -------CCCeeEEEEeeccceeec-cCc-----hhHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchhhhhhhh
Q psy15555        115 -------PDQVINFVYLYRRKFVEA-SLY-----PYFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTYPLFSYI  179 (488)
Q Consensus       115 -------~~~~v~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~~~~~~  179 (488)
                             .++ +.+..+..+.+..+ ..+     .......++.-+...+..++++  ++|||||.+......+|..-..
T Consensus        75 ~~v~~~~~~~-v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~  153 (245)
T PF08323_consen   75 VRVYRYPVDG-VPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKE  153 (245)
T ss_dssp             EEEEEEEETT-EEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHH
T ss_pred             EEEEEEEcCC-ccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhcc
Confidence                   123 66666555444322 122     1122222222233455566666  5899999888666666544322


Q ss_pred             -C-------CCeeEEEEeCCc
Q psy15555        180 -G-------GSKVACYIHYPT  192 (488)
Q Consensus       180 -~-------~~~~v~~~h~p~  192 (488)
                       .       ++|+++++|...
T Consensus       154 ~~~~~~~~~~~~~v~TIHN~~  174 (245)
T PF08323_consen  154 RYQQDPFFANIPTVFTIHNLE  174 (245)
T ss_dssp             CCSS------SEEEEEESSTT
T ss_pred             ccccccccccceeEEEEcccc
Confidence             2       589999999743

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.32  E-value=0.0063  Score=60.28  Aligned_cols=110  Identities=13%  Similarity=0.058  Sum_probs=66.3

Q ss_pred             CCcEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceec
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLA  429 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~  429 (488)
                      .++..+.+++|+.++   ++..+  +||.    .++-++++||+++|+|+|+-+..+.    ..-+.+..    +.|+.+
T Consensus       323 ~~~g~v~~w~PQ~~i---L~h~~v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~----~~G~~~  391 (451)
T PLN02410        323 SGRGYIVKWAPQKEV---LSHPAVGGFWS----HCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVW----KIGIQV  391 (451)
T ss_pred             cCCeEEEccCCHHHH---hCCCccCeeee----cCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHh----CeeEEe
Confidence            356677799988774   55544  4554    2334689999999999999776432    11112221    356554


Q ss_pred             C---CHHHHHHHHHHHHccCHHHHHHHHHH-------HHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        430 C---DEVEYAQTIKLILHLSQDTKTRISQN-------AVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       430 ~---~~~~l~~~i~~ll~~~~~~~~~~~~~-------a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                      +   +.+++++++++++. +++ .+++.++       +++.+ +.-|..+-.+++.+.+.
T Consensus       392 ~~~~~~~~v~~av~~lm~-~~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~  449 (451)
T PLN02410        392 EGDLDRGAVERAVKRLMV-EEE-GEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR  449 (451)
T ss_pred             CCcccHHHHHHHHHHHHc-CCc-HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            2   88999999999997 543 2333333       33333 33455554555554443

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.31  E-value=0.0008  Score=68.39  Aligned_cols=135  Identities=16%  Similarity=0.133  Sum_probs=77.9

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      .+..+++..|+... ...+..++++.+..++.     |+ ++++.-++...      ..         +++|+....++|
T Consensus       275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~-----~~-~~iW~~~~~~~------~~---------l~~n~~~~~W~P  332 (500)
T PF00201_consen  275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENL-----PQ-RFIWKYEGEPP------EN---------LPKNVLIVKWLP  332 (500)
T ss_dssp             TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCS-----TT-EEEEEETCSHG------CH---------HHTTEEEESS--
T ss_pred             CCCEEEEecCcccc-hhHHHHHHHHHHHHhhC-----CC-ccccccccccc------cc---------ccceEEEecccc
Confidence            34567777888753 23444455555555554     45 67776554210      11         146789999998


Q ss_pred             hHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---ceeccCCCccccceecC----CHHHHHH
Q psy15555        367 YEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC----DEVEYAQ  437 (488)
Q Consensus       367 ~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~----~~~~l~~  437 (488)
                      +.++   ++...  +||.    .++-.++.||+.+|+|+|+-+..+-..   ..+++.    +.|...+    +.+++.+
T Consensus       333 Q~~l---L~hp~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~----G~g~~l~~~~~~~~~l~~  401 (500)
T PF00201_consen  333 QNDL---LAHPRVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK----GVGVVLDKNDLTEEELRA  401 (500)
T ss_dssp             HHHH---HTSTTEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT----TSEEEEGGGC-SHHHHHH
T ss_pred             chhh---hhcccceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEE----eeEEEEEecCCcHHHHHH
Confidence            8655   55554  4553    344568999999999999987743211   223333    4566554    7899999


Q ss_pred             HHHHHHccCHHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQ  455 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~  455 (488)
                      +|.++++ |+..+++..+
T Consensus       402 ai~~vl~-~~~y~~~a~~  418 (500)
T PF00201_consen  402 AIREVLE-NPSYKENAKR  418 (500)
T ss_dssp             HHHHHHH-SHHHHHHHHH
T ss_pred             HHHHHHh-hhHHHHHHHH
Confidence            9999999 8755544333

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>PLN02207 UDP-glycosyltransferase

Probab=97.28  E-value=0.038  Score=54.89  Aligned_cols=216  Identities=13%  Similarity=0.033  Sum_probs=106.6

Q ss_pred             HhcccCEEEEcChhHHHH-HHHHhc---cCCceEEEcCCCCch--h-----------hhccCCCCCCCCeEEEEeeccCC
Q psy15555        238 VGKYSDIIMVNSSWTEEH-VIQLWN---CQLKTYKLYPPCDTE--D-----------LKKITHSKTDGPVKIISVAQFRP  300 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~-~~~~~~---~~~k~~vi~~~~d~~--~-----------~~~~~~~~~~~~~~i~~~g~~~~  300 (488)
                      ...++|.++++|-...+. ..+.+.   ...++..|++-....  .           ....-...+.+..+.+..|+...
T Consensus       208 ~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~  287 (468)
T PLN02207        208 LFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGR  287 (468)
T ss_pred             hcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcC
Confidence            357799999999877665 333231   112466665543110  0           00000112234567777777642


Q ss_pred             C--CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCC-cHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC
Q psy15555        301 E--KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEE-DEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG  377 (488)
Q Consensus       301 ~--k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~-~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a  377 (488)
                      -  +....++.++...          +..++++=+.+... .....+.+.+..     .++..+.++.|+.++..- ...
T Consensus       288 ~~~~q~~ela~~l~~~----------~~~flW~~r~~~~~~~~~lp~~f~er~-----~~~g~i~~W~PQ~~IL~H-~~v  351 (468)
T PLN02207        288 LRGPLVKEIAHGLELC----------QYRFLWSLRTEEVTNDDLLPEGFLDRV-----SGRGMICGWSPQVEILAH-KAV  351 (468)
T ss_pred             CCHHHHHHHHHHHHHC----------CCcEEEEEeCCCccccccCCHHHHhhc-----CCCeEEEEeCCHHHHhcc-ccc
Confidence            2  2233333333332          23455543322110 000001222222     356677799988876433 223


Q ss_pred             cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceec-----------CCHHHHHHHHHHH
Q psy15555        378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLA-----------CDEVEYAQTIKLI  442 (488)
Q Consensus       378 d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~-----------~~~~~l~~~i~~l  442 (488)
                      .+||.    .++-++++||+.+|+|+|+-+..+    +..-+++..    +.|+-+           -+.+++.++|+++
T Consensus       352 g~FvT----H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~----gvGv~~~~~~~~~~~~~v~~e~i~~av~~v  423 (468)
T PLN02207        352 GGFVS----HCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKEL----KLAVELKLDYRVHSDEIVNANEIETAIRCV  423 (468)
T ss_pred             ceeee----cCccccHHHHHHcCCCEEecCccccchhhHHHHHHHh----CceEEEecccccccCCcccHHHHHHHHHHH
Confidence            33553    233468999999999999977633    221123223    445411           1678999999999


Q ss_pred             Hcc-CHHH---HHHHHHHHHHHH-hhcCHHHHHHHHHHHH
Q psy15555        443 LHL-SQDT---KTRISQNAVSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       443 l~~-~~~~---~~~~~~~a~~~~-~~~s~~~~~~~~~~~~  477 (488)
                      +.. +++.   .+++++.+++.+ +.-|..+..+++.+-+
T Consensus       424 m~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~  463 (468)
T PLN02207        424 MNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV  463 (468)
T ss_pred             HhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence            951 1222   223334444444 4455555444444443

>PLN00164 glucosyltransferase; Provisional

Probab=97.23  E-value=0.28  Score=49.22  Aligned_cols=89  Identities=8%  Similarity=0.084  Sum_probs=56.1

Q ss_pred             cEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC-
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      .+.+.+++|+.+   +++.++  +||.    .++-++++||+.+|+|+|+-+..+    +..-+++..    +.|+.+. 
T Consensus       340 g~~v~~w~PQ~~---iL~h~~vg~fvt----H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~----gvG~~~~~  408 (480)
T PLN00164        340 GLVWPTWAPQKE---ILAHAAVGGFVT----HCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADM----GVAVAMKV  408 (480)
T ss_pred             CeEEeecCCHHH---HhcCcccCeEEe----ecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHh----CeEEEecc
Confidence            467778987765   466666  3443    233468999999999999976632    221123333    4565431 


Q ss_pred             --------CHHHHHHHHHHHHccCHH-HHHHHHHHHH
Q psy15555        431 --------DEVEYAQTIKLILHLSQD-TKTRISQNAV  458 (488)
Q Consensus       431 --------~~~~l~~~i~~ll~~~~~-~~~~~~~~a~  458 (488)
                              +.+++.++|.+++. +++ +.+++.+++.
T Consensus       409 ~~~~~~~~~~e~l~~av~~vm~-~~~~~~~~~r~~a~  444 (480)
T PLN00164        409 DRKRDNFVEAAELERAVRSLMG-GGEEEGRKAREKAA  444 (480)
T ss_pred             ccccCCcCcHHHHHHHHHHHhc-CCchhHHHHHHHHH
Confidence                    57899999999997 543 2344444443

>PLN00414 glycosyltransferase family protein

Probab=97.16  E-value=0.011  Score=58.39  Aligned_cols=202  Identities=8%  Similarity=-0.034  Sum_probs=108.3

Q ss_pred             HhcccCEEEEcChhHHH-HHHHHhcc--CCceEEEcCCCCchh----------hhccCCCCCCCCeEEEEeeccCCCCCh
Q psy15555        238 VGKYSDIIMVNSSWTEE-HVIQLWNC--QLKTYKLYPPCDTED----------LKKITHSKTDGPVKIISVAQFRPEKDH  304 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~-~~~~~~~~--~~k~~vi~~~~d~~~----------~~~~~~~~~~~~~~i~~~g~~~~~k~~  304 (488)
                      ....+|.|+++|=...+ .+.+.+..  ..++..|+|-+....          ....-...+.+..+.+..|+.... ..
T Consensus       189 ~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~-~~  267 (446)
T PLN00414        189 GLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFF-EK  267 (446)
T ss_pred             hhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccC-CH
Confidence            34678999998854432 22222211  124666666531110          001112233455677788887543 23


Q ss_pred             HHHHHHHHHhHHhhhhhccCceEEEEEec-CCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC--cEEE
Q psy15555        305 PLQLRAMYQLRQIISEELWDNLKLIFIGS-TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG--LIGL  381 (488)
Q Consensus       305 ~~ll~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a--d~~v  381 (488)
                      +.+.+....|....     .++..++... +........-+.+.+..+..    ..++.+++|+.++   ++.+  ++||
T Consensus       268 ~q~~e~a~gL~~s~-----~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~----g~vv~~w~PQ~~v---L~h~~v~~fv  335 (446)
T PLN00414        268 DQFQEFCLGMELTG-----LPFLIAVMPPKGSSTVQEALPEGFEERVKGR----GIVWEGWVEQPLI---LSHPSVGCFV  335 (446)
T ss_pred             HHHHHHHHHHHHcC-----CCeEEEEecCCCcccchhhCChhHHHHhcCC----CeEEeccCCHHHH---hcCCccceEE
Confidence            45555555555443     3433344321 10000011223444444433    4667799988764   5555  4465


Q ss_pred             EcCCCCcCCccHHHHHHcCCcEEEeCCCC----Ccccee-ccCCCccccceec-------CCHHHHHHHHHHHHccCHHH
Q psy15555        382 HAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIV-IEDPETCRNGFLA-------CDEVEYAQTIKLILHLSQDT  449 (488)
Q Consensus       382 ~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv-~~~~~~~~~g~~~-------~~~~~l~~~i~~ll~~~~~~  449 (488)
                      .    .++.++++||+.+|+|+|+-+..+    +. ..+ +..    +.|..+       -+.+++.+++++++.++.+.
T Consensus       336 t----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na-~~~~~~~----g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~  406 (446)
T PLN00414        336 N----HCGFGSMWESLVSDCQIVFIPQLADQVLIT-RLLTEEL----EVSVKVQREDSGWFSKESLRDTVKSVMDKDSEI  406 (446)
T ss_pred             e----cCchhHHHHHHHcCCCEEecCcccchHHHH-HHHHHHh----CeEEEeccccCCccCHHHHHHHHHHHhcCChhh
Confidence            4    344578999999999999977632    22 222 233    455544       27889999999999722355


Q ss_pred             HHHHHHHHHHHH
Q psy15555        450 KTRISQNAVSSV  461 (488)
Q Consensus       450 ~~~~~~~a~~~~  461 (488)
                      .+++.+++++..
T Consensus       407 g~~~r~~a~~~~  418 (446)
T PLN00414        407 GNLVKRNHKKLK  418 (446)
T ss_pred             HHHHHHHHHHHH
Confidence            566666665443

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=97.13  E-value=0.35  Score=48.44  Aligned_cols=111  Identities=17%  Similarity=0.084  Sum_probs=67.1

Q ss_pred             CcEEEecCCChHHHHHHHHh--CcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceec-
Q psy15555        357 NNVEFKVNLPYEDMKKEFSE--GLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLA-  429 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~--ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~-  429 (488)
                      .++.+.+++|+.+   +++.  +++||.    .++.++++||+++|+|+|+-+..+    +..-+++..    +.|... 
T Consensus       343 ~g~~v~~w~PQ~~---vL~h~~v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~----gvG~~~~  411 (477)
T PLN02863        343 RGLVIRGWAPQVA---ILSHRAVGAFLT----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDEL----KVAVRVC  411 (477)
T ss_pred             CCEEecCCCCHHH---HhcCCCcCeEEe----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhh----ceeEEec
Confidence            4688889998765   4555  445664    344568999999999999977632    211123332    455443 


Q ss_pred             ------CCHHHHHHHHHHHHccCHHHHH---HHHHHHHHHH-hhcCHHHHHHHHHHHHH
Q psy15555        430 ------CDEVEYAQTIKLILHLSQDTKT---RISQNAVSSV-DRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       430 ------~~~~~l~~~i~~ll~~~~~~~~---~~~~~a~~~~-~~~s~~~~~~~~~~~~~  478 (488)
                            -+.+++.+++.+++..+++.++   ++++.+++.+ +.-|..+..+++.+.+.
T Consensus       412 ~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~  470 (477)
T PLN02863        412 EGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVV  470 (477)
T ss_pred             cCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence                  1678999999998842444333   3334444444 44555555566655554

>PLN02534 UDP-glycosyltransferase

Probab=96.93  E-value=0.54  Score=47.20  Aligned_cols=77  Identities=19%  Similarity=0.061  Sum_probs=50.2

Q ss_pred             CcEEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc----cceeccCCCcccccee--
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK----MDIVIEDPETCRNGFL--  428 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~----~eiv~~~~~~~~~g~~--  428 (488)
                      .++.+.+++|+.+   +++..++  ||.    .++.++++||+.+|+|+|+-+..+-.    ..+++..    +.|+-  
T Consensus       344 ~g~~v~~w~pq~~---iL~h~~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~----~vGv~~~  412 (491)
T PLN02534        344 RGLLIKGWAPQVL---ILSHPAIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVL----RIGVRVG  412 (491)
T ss_pred             CCeeccCCCCHHH---HhcCCccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhh----cceEEec
Confidence            4677889998755   5666665  443    45567999999999999997764321    0112111    11111  


Q ss_pred             ---------------cCCHHHHHHHHHHHHc
Q psy15555        429 ---------------ACDEVEYAQTIKLILH  444 (488)
Q Consensus       429 ---------------~~~~~~l~~~i~~ll~  444 (488)
                                     +-+.+++++++++++.
T Consensus       413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~  443 (491)
T PLN02534        413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMD  443 (491)
T ss_pred             ccccccccccccccCccCHHHHHHHHHHHhc
Confidence                           1267899999999985

>KOG1050|consensus

Probab=96.92  E-value=0.34  Score=50.59  Aligned_cols=201  Identities=15%  Similarity=0.198  Sum_probs=126.2

Q ss_pred             eEEEcCCCCchhhhccCCC------------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEec
Q psy15555        266 TYKLYPPCDTEDLKKITHS------------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS  333 (488)
Q Consensus       266 ~~vi~~~~d~~~~~~~~~~------------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~  333 (488)
                      +..+|-++|...+......            ...++.+++-+-++..-||...=+.++.++..++++- .+++.++.+..
T Consensus       241 v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~-~~kVvliqi~~  319 (732)
T KOG1050|consen  241 VKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEW-IDKVVLIQIEN  319 (732)
T ss_pred             eeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhh-hceEEEEEEec
Confidence            4445556766665443311            2246778888889999999888888999988877321 12455665554


Q ss_pred             CCCCCcHHHHHHHHHHHHhc--------CC---CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHc--C
Q psy15555        334 TRNEEDEVCVKDMQDLCKHL--------SL---ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAA--G  400 (488)
Q Consensus       334 ~~~~~~~~~~~~l~~~~~~~--------~l---~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~--G  400 (488)
                      ....+..+ .++++..+..+        +-   ..-+.+...++..++.++|..+|+.+..++.+|..++.+|+..|  +
T Consensus       320 ~~~~~~~~-v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~  398 (732)
T KOG1050|consen  320 PKRTDGKE-VEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN  398 (732)
T ss_pred             CCcccchH-HHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence            43333322 23333322211        10   12234556679999999999999999999999999999999888  3


Q ss_pred             --CcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q psy15555        401 --LIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLT  475 (488)
Q Consensus       401 --~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  475 (488)
                        ++.|.+...|.. +..+++      ..++.  |.++++.+|...+.+..+.++..-..-...+...+....+..+.+
T Consensus       399 ~~~~lVlsef~G~~-~tl~d~------aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~  470 (732)
T KOG1050|consen  399 KKSVLVLSEFIGDD-TTLEDA------AIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQ  470 (732)
T ss_pred             cCCceEEeeecccc-cccccc------CEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHH
Confidence              778888776664 555443      44444  899999999999994444443333333333333334444444333

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=96.92  E-value=0.034  Score=57.19  Aligned_cols=139  Identities=15%  Similarity=0.153  Sum_probs=98.4

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEec-CCCCC-cHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS-TRNEE-DEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~-~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      ++...++++-|++..|...+.+.-...+.....++..|.+.+++.|. +|... ..+....+...++..+...+|+|+..
T Consensus       485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~n  564 (750)
T COG0058         485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPN  564 (750)
T ss_pred             CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCC
Confidence            45678899999999999776655444444443111225677788885 44331 11222333444444444457999998


Q ss_pred             CChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceec--cCCCccccceecC
Q psy15555        365 LPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI--EDPETCRNGFLAC  430 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~--~~~~~~~~g~~~~  430 (488)
                      .+-.-...++.+||+-...|  ..|..|.+-+=++..|.+.|++-.|.+. |+.+  .+    +|||++.
T Consensus       565 YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanv-Ei~e~vg~----~N~~~fG  629 (750)
T COG0058         565 YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANV-EIYEHVGG----ENGWIFG  629 (750)
T ss_pred             CChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHH-HHHHhcCC----CceEEeC
Confidence            77777778999999887776  5789999999999999999999988886 8886  55    8999987

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.76  E-value=0.07  Score=53.55  Aligned_cols=106  Identities=12%  Similarity=-0.040  Sum_probs=62.6

Q ss_pred             cEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceec--
Q psy15555        358 NVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLA--  429 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~--  429 (488)
                      +..+.+++|+.+   +++...  +||.    .++-++++||+++|+|+|+-+..+-    ...+++..    +.|+.+  
T Consensus       341 rg~v~~w~PQ~~---iL~h~~vg~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~----g~g~~~~~  409 (475)
T PLN02167        341 RGLVCGWAPQVE---ILAHKAIGGFVS----HCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKEL----GLAVELRL  409 (475)
T ss_pred             CeeeeccCCHHH---HhcCcccCeEEe----eCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHh----CeeEEeec
Confidence            346679998765   455543  5554    2334689999999999999766322    11123333    455433  


Q ss_pred             --------C-CHHHHHHHHHHHHccCHH---HHHHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        430 --------C-DEVEYAQTIKLILHLSQD---TKTRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       430 --------~-~~~~l~~~i~~ll~~~~~---~~~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                              . +.+++++++.+++..+.+   ..+++++.+++.+ +.-|..+-.+++.
T Consensus       410 ~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v  467 (475)
T PLN02167        410 DYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFI  467 (475)
T ss_pred             ccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence                    1 678999999999972312   2334444455555 4444444444443

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.74  E-value=0.15  Score=52.52  Aligned_cols=143  Identities=15%  Similarity=0.124  Sum_probs=89.6

Q ss_pred             CCCeEEEEeeccCCCCChHH-HH---HHHHHhHHhhhhhccCceEEEEEec-CCCCCcHHHHHHHHHHHHhc--------
Q psy15555        287 DGPVKIISVAQFRPEKDHPL-QL---RAMYQLRQIISEELWDNLKLIFIGS-TRNEEDEVCVKDMQDLCKHL--------  353 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~-ll---~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~~~~~~~~l~~~~~~~--------  353 (488)
                      ++....+++-|+...|...+ ++   .-+.++++.- .....+.+++++|. +|..   ...+++-+++.+.        
T Consensus       442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p-~~~~~Pv~~IFaGKAhP~d---~~gK~iIk~I~~va~~in~Dp  517 (713)
T PF00343_consen  442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNP-NKKIRPVQFIFAGKAHPGD---YMGKEIIKLINNVAEVINNDP  517 (713)
T ss_dssp             TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHST-TSCCS-EEEEEE----TT----HHHHHHHHHHHHHHHHHCT-T
T ss_pred             cchhhhhhhhhcccccccCcccccHHHHHHHHHhcc-cCCCCCeEEEEeccCCCCc---HHHHHHHHHHHHHHHHHhcCh
Confidence            45677889999999999776 33   3444555431 11123678888885 4433   3334444444322        


Q ss_pred             CCCC--cEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec
Q psy15555        354 SLEN--NVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA  429 (488)
Q Consensus       354 ~l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~  429 (488)
                      .+.+  +|.|+...+-.--..++..||+....|  ..|..|.+-+=+|..|.+.+++-.|.+. |+.+.-  ..++.+++
T Consensus       518 ~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~ni-Ei~e~v--G~eN~fiF  594 (713)
T PF00343_consen  518 EVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNI-EIAEAV--GEENIFIF  594 (713)
T ss_dssp             TTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHH-HHHHHH---GGGSEEE
T ss_pred             hhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhH-HHHHhc--CCCcEEEc
Confidence            2233  689999888788888999999999887  5799999999999999999999888876 776542  12567777


Q ss_pred             C-CHHHHH
Q psy15555        430 C-DEVEYA  436 (488)
Q Consensus       430 ~-~~~~l~  436 (488)
                      . +.+++.
T Consensus       595 G~~~~ev~  602 (713)
T PF00343_consen  595 GLTAEEVE  602 (713)
T ss_dssp             S-BHHHHH
T ss_pred             CCCHHHHH
Confidence            6 555543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=96.70  E-value=0.14  Score=47.26  Aligned_cols=159  Identities=14%  Similarity=0.091  Sum_probs=85.9

Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCC--CCeEEEEeeccC---CCCChHHHH
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTD--GPVKIISVAQFR---PEKDHPLQL  308 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~--~~~~i~~~g~~~---~~k~~~~ll  308 (488)
                      ..+.++++++.+.+-.+...+.+.+. +.+.++.+++-+.-  ...+.......  .......+....   .....+.+.
T Consensus       120 ~~~~~l~~~~~i~vRD~~S~~~l~~~-g~~~~~~~~~D~af--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (286)
T PF04230_consen  120 LLRRILSKADYISVRDEYSYELLKKL-GISGNVKLVPDPAF--LLPPSYPDEDKSKPKRNYISVSNSPSRNNEEYIEEIA  196 (286)
T ss_pred             HHHHHHhCCCEEEECCHHHHHHHHHc-CCCCCcEEEeCchh--hcCcccccccccccccceeeeccccchhhhhHHHHHH
Confidence            44557788999999999988866664 43325666665531  11111111000  012222222221   223344555


Q ss_pred             HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHH-hcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCC
Q psy15555        309 RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK-HLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNE  387 (488)
Q Consensus       309 ~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~-~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e  387 (488)
                      +.+..+.+..     ....++.....+...   .......... ..............+..|+..+++.||++|....  
T Consensus       197 ~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~Rl--  266 (286)
T PF04230_consen  197 ELIQRLLDKG-----YKIVLLPFSPSDDDE---DDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRL--  266 (286)
T ss_pred             HHHHHhhccc-----ceeEEEEeeeccchh---hHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCC--
Confidence            6666665532     334443333333221   1111111111 1122233444555677999999999999998763  


Q ss_pred             cCCccHHHHHHcCCcEEEeCC
Q psy15555        388 HFGIGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       388 ~~g~~~lEa~a~G~PvI~~~~  408 (488)
                         |..+=|+++|+|+|+-+.
T Consensus       267 ---H~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  267 ---HGAILALSLGVPVIAISY  284 (286)
T ss_pred             ---HHHHHHHHcCCCEEEEec
Confidence               688999999999998654

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN03004 UDP-glycosyltransferase

Probab=96.67  E-value=0.04  Score=54.54  Aligned_cols=82  Identities=17%  Similarity=0.105  Sum_probs=56.2

Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC--
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC--  430 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~--  430 (488)
                      .++.+.+++|+.+   +++.+++..+-+  .++-++++||+++|+|+|+.+..+    +...+.+..    +.|+.++  
T Consensus       334 ~g~~v~~W~PQ~~---iL~H~~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~----g~g~~l~~~  404 (451)
T PLN03004        334 KGMVVKSWAPQVP---VLNHKAVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEI----KIAISMNES  404 (451)
T ss_pred             CcEEEEeeCCHHH---HhCCCccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHh----CceEEecCC
Confidence            5788899998876   577788632222  344568999999999999976632    221222333    4565542  


Q ss_pred             -----CHHHHHHHHHHHHccCHH
Q psy15555        431 -----DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       431 -----~~~~l~~~i~~ll~~~~~  448 (488)
                           +.+++++++++++. +++
T Consensus       405 ~~~~~~~e~l~~av~~vm~-~~~  426 (451)
T PLN03004        405 ETGFVSSTEVEKRVQEIIG-ECP  426 (451)
T ss_pred             cCCccCHHHHHHHHHHHhc-CHH
Confidence                 67899999999998 644

>PLN02555 limonoid glucosyltransferase

Probab=96.65  E-value=0.068  Score=53.37  Aligned_cols=111  Identities=14%  Similarity=0.056  Sum_probs=65.8

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceec--
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLA--  429 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~--  429 (488)
                      .+++.+.+++|+.++... ..+.+||.    .++-++++||+.+|+|+|+.+..+    +..-+++..    +.|+.+  
T Consensus       336 ~~~g~v~~W~PQ~~iL~H-~~v~~Fvt----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~----gvGv~l~~  406 (480)
T PLN02555        336 GDKGKIVQWCPQEKVLAH-PSVACFVT----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVF----KTGVRLCR  406 (480)
T ss_pred             CCceEEEecCCHHHHhCC-CccCeEEe----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHh----CceEEccC
Confidence            456788899988764332 33455664    344568999999999999977643    111123332    345444  


Q ss_pred             ----C---CHHHHHHHHHHHHccCHHHHHHHHHHH-------HHHH-hhcCHHHHHHHHHHHH
Q psy15555        430 ----C---DEVEYAQTIKLILHLSQDTKTRISQNA-------VSSV-DRFSMEEFKNGFLTFT  477 (488)
Q Consensus       430 ----~---~~~~l~~~i~~ll~~~~~~~~~~~~~a-------~~~~-~~~s~~~~~~~~~~~~  477 (488)
                          .   +.+++.+++.+++. +++ -+++.++|       ++.+ +.-|..+-.+++.+.+
T Consensus       407 ~~~~~~~v~~~~v~~~v~~vm~-~~~-g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i  467 (480)
T PLN02555        407 GEAENKLITREEVAECLLEATV-GEK-AAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKL  467 (480)
T ss_pred             CccccCcCcHHHHHHHHHHHhc-Cch-HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence                1   67899999999996 532 23444444       4334 3344444444444333

>PLN03015 UDP-glucosyl transferase

Probab=96.65  E-value=0.14  Score=50.82  Aligned_cols=75  Identities=12%  Similarity=0.000  Sum_probs=48.8

Q ss_pred             EEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceec---
Q psy15555        359 VEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLA---  429 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~---  429 (488)
                      +.+.+++|+.++..   ...  .|+.    .++-++++||+.+|+|+|+-+..+-    ..-+.+..    +.|+-+   
T Consensus       337 l~v~~W~PQ~~vL~---h~~vg~fvt----H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~----gvg~~~~~~  405 (470)
T PLN03015        337 LVVTQWAPQVEILS---HRSIGGFLS----HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEI----GVAVRTSEL  405 (470)
T ss_pred             eEEEecCCHHHHhc---cCccCeEEe----cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHh----CeeEEeccc
Confidence            67789998877654   443  3443    3345689999999999999776322    11122222    344333   


Q ss_pred             -----CCHHHHHHHHHHHHc
Q psy15555        430 -----CDEVEYAQTIKLILH  444 (488)
Q Consensus       430 -----~~~~~l~~~i~~ll~  444 (488)
                           -+.+++.+++++++.
T Consensus       406 ~~~~~v~~e~i~~~v~~lm~  425 (470)
T PLN03015        406 PSEKVIGREEVASLVRKIVA  425 (470)
T ss_pred             ccCCccCHHHHHHHHHHHHc
Confidence                 167899999999995

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.52  E-value=0.2  Score=45.49  Aligned_cols=105  Identities=13%  Similarity=0.132  Sum_probs=57.9

Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP  366 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~  366 (488)
                      +++.+++..|...+.|...  .+-+.++.+...+   ....+++.|...+    ...+...+..+... .+.+.+.|..+
T Consensus       104 ~~~~i~i~~~a~~~~k~wp--~e~~~~l~~~l~~---~~~~vvl~g~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~  173 (247)
T PF01075_consen  104 DKPYIGINPGASWPSKRWP--AEKWAELIERLKE---RGYRVVLLGGPEE----QEKEIADQIAAGLQ-NPVINLAGKTS  173 (247)
T ss_dssp             TSSEEEEE---SSGGGS----HHHHHHHHHHHCC---CT-EEEE--SSHH----HHHHHHHHHHTTHT-TTTEEETTTS-
T ss_pred             cCCeEEEeecCCCccccCC--HHHHHHHHHHHHh---hCceEEEEccchH----HHHHHHHHHHHhcc-cceEeecCCCC
Confidence            4567788888877778765  4455555444311   1357778886531    01122233333222 13678888888


Q ss_pred             hHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        367 YEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       367 ~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      -.|+..+++.||++|++-   ++  .+==|.|.|+|+|+-
T Consensus       174 l~e~~ali~~a~~~I~~D---tg--~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  174 LRELAALISRADLVIGND---TG--PMHLAAALGTPTVAL  208 (247)
T ss_dssp             HHHHHHHHHTSSEEEEES---SH--HHHHHHHTT--EEEE
T ss_pred             HHHHHHHHhcCCEEEecC---Ch--HHHHHHHHhCCEEEE
Confidence            899999999999999863   22  333467889999994

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=96.45  E-value=0.14  Score=48.08  Aligned_cols=150  Identities=12%  Similarity=-0.010  Sum_probs=86.9

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEE---EcCCCCchhhhccCCC------CCCCCeEEEEeeccCCC--CCh---H
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYK---LYPPCDTEDLKKITHS------KTDGPVKIISVAQFRPE--KDH---P  305 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~v---i~~~~d~~~~~~~~~~------~~~~~~~i~~~g~~~~~--k~~---~  305 (488)
                      +..|.|++..++-       .....++..   .+|.++.+........      ....+.+.+.+|.-+..  =+.   .
T Consensus        96 ~~FDlvi~p~HD~-------~~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~  168 (311)
T PF06258_consen   96 RPFDLVIVPEHDR-------LPRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAE  168 (311)
T ss_pred             cccCEEEECcccC-------cCCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHH
Confidence            4469999987761       111223322   3455666554442211      11244556666753322  122   3


Q ss_pred             HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCC
Q psy15555        306 LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMW  385 (488)
Q Consensus       306 ~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~  385 (488)
                      .+++.+..+.+..      ...+.|..+....  .+..+.+++..+.   .+.+.+.+.-+.+-+..+|+.||.++.+..
T Consensus       169 ~l~~~l~~~~~~~------~~~~~vttSRRTp--~~~~~~L~~~~~~---~~~~~~~~~~~~nPy~~~La~ad~i~VT~D  237 (311)
T PF06258_consen  169 RLLDQLAALAAAY------GGSLLVTTSRRTP--PEAEAALRELLKD---NPGVYIWDGTGENPYLGFLAAADAIVVTED  237 (311)
T ss_pred             HHHHHHHHHHHhC------CCeEEEEcCCCCc--HHHHHHHHHhhcC---CCceEEecCCCCCcHHHHHHhCCEEEEcCc
Confidence            5666666666664      4678887765433  2333444444432   345645555566779999999997776643


Q ss_pred             CCcCCccHHHHHHcCCcEEEeCCCC
Q psy15555        386 NEHFGIGIVECMAAGLIMIAHKSGG  410 (488)
Q Consensus       386 ~e~~g~~~lEa~a~G~PvI~~~~~~  410 (488)
                      .   -.-+.||++.|+||...+..+
T Consensus       238 S---vSMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  238 S---VSMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             c---HHHHHHHHHcCCCEEEecCCC
Confidence            2   224689999999999987765

The function of this family is unknown.

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=96.40  E-value=0.035  Score=57.67  Aligned_cols=147  Identities=16%  Similarity=0.114  Sum_probs=102.8

Q ss_pred             CCCCeEEEEeeccCCCCChHH-HHHH---HHHhHHhhhhhccCceEEEEEecC-CCCCcHHHHHHHHHHHHhcC------
Q psy15555        286 TDGPVKIISVAQFRPEKDHPL-QLRA---MYQLRQIISEELWDNLKLIFIGST-RNEEDEVCVKDMQDLCKHLS------  354 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~-ll~a---~~~l~~~~~~~~~~~~~l~ivG~~-~~~~~~~~~~~l~~~~~~~~------  354 (488)
                      .++....+++-|+...|...+ ++..   +.++++. ++....+.++++.|.- |..   ...+++-+++....      
T Consensus       524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y---~~aK~iIklI~~va~~iN~D  599 (794)
T TIGR02093       524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKED-PPKDIVPRTVIFGGKAAPGY---HMAKLIIKLINSVAEVVNND  599 (794)
T ss_pred             CccccchhhheechhhhHHHHHHhhhHHHHHHHHhC-CCcCCCCeEEEEEecCCCCc---HHHHHHHHHHHHHHHHhccC
Confidence            345677788999999999877 5444   4444433 1111125678888854 432   33355555544433      


Q ss_pred             --CCC--cEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        355 --LEN--NVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       355 --l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                        +.+  +|.|+....-.--..++.+||+....|  ..|..|..-+=+|..|.+.|++-.|.+. |+.++-  +.+|+++
T Consensus       600 p~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanv-Ei~e~v--G~eN~fi  676 (794)
T TIGR02093       600 PAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIREEV--GAENIFI  676 (794)
T ss_pred             hhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhH-HHHHHh--CcccEEE
Confidence              334  699998877777888999999988777  5788999999999999999999988886 888761  1278999


Q ss_pred             cC-CHHHHHHHH
Q psy15555        429 AC-DEVEYAQTI  439 (488)
Q Consensus       429 ~~-~~~~l~~~i  439 (488)
                      +. +.+++.+.-
T Consensus       677 FG~~~~ev~~~~  688 (794)
T TIGR02093       677 FGLTVEEVEALR  688 (794)
T ss_pred             cCCCHHHHHHHH
Confidence            87 777766543

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=96.39  E-value=0.051  Score=53.79  Aligned_cols=155  Identities=11%  Similarity=0.102  Sum_probs=97.4

Q ss_pred             CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChH
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE  368 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~  368 (488)
                      ..-++|.=...-+++-+..++++.+.         -+++-.+.+...               ....+++.|.=+|.++.+
T Consensus       278 ~~AlVyGK~~~~w~~k~~~l~~l~~~---------~eih~tV~~~~~---------------~~~~~P~~V~NHG~l~~~  333 (559)
T PF15024_consen  278 NQALVYGKERYMWKGKEKYLDVLHKY---------MEIHGTVYDEPQ---------------RPPNVPSFVKNHGILSGD  333 (559)
T ss_pred             ceeEEEccchhhhcCcHHHHHHHHhh---------cEEEEEeccCCC---------------CCcccchhhhhcCcCCHH
Confidence            34455544444456666667666543         355555544321               111224445566788999


Q ss_pred             HHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCcc----ceeccCC---------------Ccccccee
Q psy15555        369 DMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKM----DIVIEDP---------------ETCRNGFL  428 (488)
Q Consensus       369 el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~----eiv~~~~---------------~~~~~g~~  428 (488)
                      |+..+++.+.+||+... .|  |=+++||+|.|+|.|-.....+..    +.+.+.+               .+...-+.
T Consensus       334 ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVyt  411 (559)
T PF15024_consen  334 EFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYT  411 (559)
T ss_pred             HHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEE
Confidence            99999999999997642 33  668999999999999855422210    1111110               11122344


Q ss_pred             cC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHH
Q psy15555        429 AC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       429 ~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~  479 (488)
                      |+  |.+++.+||+++++ .+-         .-++ -.|+.+.+.+++..++++
T Consensus       412 Vd~~n~~~v~~Avk~il~-~~v---------~Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  412 VDINNSTEVEAAVKAILA-TPV---------EPYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             EcCCCHHHHHHHHHHHHh-cCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence            44  89999999999998 431         2345 789999999999887764

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=96.26  E-value=0.77  Score=40.82  Aligned_cols=107  Identities=7%  Similarity=-0.019  Sum_probs=60.4

Q ss_pred             CCCeEEEEeeccCCCCCh-----HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHh-cCCCCcEE
Q psy15555        287 DGPVKIISVAQFRPEKDH-----PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH-LSLENNVE  360 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~-----~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~-~~l~~~v~  360 (488)
                      .+..+-+.+|.-.+.-..     ..+..++.+..++      ....+.+.-+....      +.++..++. +.-...+.
T Consensus       160 ~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~------~g~~~lisfSRRTp------~~~~s~l~~~l~s~~~i~  227 (329)
T COG3660         160 PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN------QGGSFLISFSRRTP------DTVKSILKNNLNSSPGIV  227 (329)
T ss_pred             CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh------CCceEEEEeecCCc------HHHHHHHHhccccCceeE
Confidence            456788888876543332     2233333333332      23445554433221      667776665 33222333


Q ss_pred             EecC-CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC
Q psy15555        361 FKVN-LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       361 ~~g~-~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~  408 (488)
                      +-+. ...+-...+++.||.+|.+-..-   .-.-||++.|+||-+.-.
T Consensus       228 w~~~d~g~NPY~~~La~Adyii~TaDSi---nM~sEAasTgkPv~~~~~  273 (329)
T COG3660         228 WNNEDTGYNPYIDMLAAADYIISTADSI---NMCSEAASTGKPVFILEP  273 (329)
T ss_pred             eCCCCCCCCchHHHHhhcceEEEecchh---hhhHHHhccCCCeEEEec
Confidence            3332 14456889999999888764321   235799999999987544

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=96.18  E-value=0.026  Score=46.42  Aligned_cols=84  Identities=14%  Similarity=0.125  Sum_probs=45.7

Q ss_pred             HHHhhhcCCcEEEecCCcc--chhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        152 VEALLSFQPDIYIDTMGYA--FTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       152 ~~~l~~~~pDiii~~~~~~--~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      .+......+|+++.|.-..  ....+.....++|.++|+|......                  .......+...   +.
T Consensus        52 ~~~~~~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~Y------------------P~~~~~~rd~~---~~  110 (168)
T PF12038_consen   52 QQIPLSHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAY------------------PVSPGQERDFQ---YG  110 (168)
T ss_pred             hccccccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccC------------------CCCCCcccccc---HH
Confidence            3455566789999776222  2222322346899999999643211                  00111111111   11


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHH
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQL  259 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~  259 (488)
                      ... +  ...-.||.|+.+|.+.++.|.+.
T Consensus       111 ~~n-i--~saLaAD~v~FNS~~nr~sFL~~  137 (168)
T PF12038_consen  111 MNN-I--YSALAADRVVFNSAFNRDSFLDG  137 (168)
T ss_pred             HHH-H--HHHHhceeeeecchhhHHHHHHH
Confidence            111 1  23345899999999999988764

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>PRK14986 glycogen phosphorylase; Provisional

Probab=96.18  E-value=0.11  Score=54.23  Aligned_cols=146  Identities=13%  Similarity=0.128  Sum_probs=101.2

Q ss_pred             CCCCeEEEEeeccCCCCChHH-HHHH---HHHhHHhhhhhccCceEEEEEecC-CCCCcHHHHHHHHHHHHhc-------
Q psy15555        286 TDGPVKIISVAQFRPEKDHPL-QLRA---MYQLRQIISEELWDNLKLIFIGST-RNEEDEVCVKDMQDLCKHL-------  353 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~-ll~a---~~~l~~~~~~~~~~~~~l~ivG~~-~~~~~~~~~~~l~~~~~~~-------  353 (488)
                      .++....+++-|+...|...+ ++..   +.++++. ++....+.++++.|.- |..   ...+++-+++.+.       
T Consensus       540 dp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~-p~~~~~P~~~IFaGKAaP~y---~~aK~iIk~I~~va~~in~D  615 (815)
T PRK14986        540 NPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKAD-PDAKWVPRVNIFAGKAASAY---YMAKHIIHLINDVAKVINND  615 (815)
T ss_pred             CcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCCCc---HHHHHHHHHHHHHHHHhccC
Confidence            356678888999999999877 5555   4444433 1111125788888853 432   2233443333222       


Q ss_pred             -CCCC--cEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        354 -SLEN--NVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       354 -~l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                       .+.+  +|.|+....-.--..++.+||+....|  ..|..|..-+=+|..|.+.+++-.|.+. |+.++-  +++|||+
T Consensus       616 p~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nv-Ei~e~v--G~eN~~~  692 (815)
T PRK14986        616 PQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANV-EMLEHV--GEENIFI  692 (815)
T ss_pred             hhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchh-HHHHhc--CCCcEEE
Confidence             2233  699998877777888999999988877  4788999999999999999999988886 888751  1278999


Q ss_pred             cC-CHHHHHHH
Q psy15555        429 AC-DEVEYAQT  438 (488)
Q Consensus       429 ~~-~~~~l~~~  438 (488)
                      +. +.+++.+.
T Consensus       693 fG~~~~ev~~~  703 (815)
T PRK14986        693 FGNTAEEVEAL  703 (815)
T ss_pred             eCCCHHHHHHH
Confidence            87 67766654

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=96.16  E-value=0.17  Score=50.29  Aligned_cols=109  Identities=9%  Similarity=0.040  Sum_probs=63.8

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceec--
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLA--  429 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~--  429 (488)
                      .++..+.+++|+.+   +++..++..+-+  .++.++++||+.+|+|+|+-+..+-    ..-+.+..    +.|+-+  
T Consensus       326 ~~~g~v~~W~PQ~~---iL~h~~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~----~~G~~~~~  396 (455)
T PLN02152        326 EEVGMIVSWCSQIE---VLRHRAVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIW----KTGVRVRE  396 (455)
T ss_pred             cCCeEEEeeCCHHH---HhCCcccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHh----CceEEeec
Confidence            45677789998765   566666433222  3456789999999999999776332    11122211    133332  


Q ss_pred             ----C-CHHHHHHHHHHHHccCHHH--H---HHHHHHHHHHH-hhcCHHHHHHHHH
Q psy15555        430 ----C-DEVEYAQTIKLILHLSQDT--K---TRISQNAVSSV-DRFSMEEFKNGFL  474 (488)
Q Consensus       430 ----~-~~~~l~~~i~~ll~~~~~~--~---~~~~~~a~~~~-~~~s~~~~~~~~~  474 (488)
                          . +.+++.+++.++++ ++..  +   .++++.+++.+ +..|..+-.+++.
T Consensus       397 ~~~~~~~~e~l~~av~~vm~-~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li  451 (455)
T PLN02152        397 NSEGLVERGEIRRCLEAVME-EKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFV  451 (455)
T ss_pred             CcCCcCcHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence                1 67899999999997 5431  2   22244444444 4455544444443

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=95.96  E-value=0.075  Score=55.22  Aligned_cols=146  Identities=12%  Similarity=0.080  Sum_probs=100.4

Q ss_pred             CCCCeEEEEeeccCCCCChHH-HHHHHH---HhHHhhhhhccCceEEEEEecC-CCCCcHHHHHHHHHHHHhcC------
Q psy15555        286 TDGPVKIISVAQFRPEKDHPL-QLRAMY---QLRQIISEELWDNLKLIFIGST-RNEEDEVCVKDMQDLCKHLS------  354 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~-ll~a~~---~l~~~~~~~~~~~~~l~ivG~~-~~~~~~~~~~~l~~~~~~~~------  354 (488)
                      .++....+++-|+...|...+ ++..+.   ++++. ++....+.++++.|.- |..   ...+++-+++....      
T Consensus       526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y---~~aK~iIklI~~va~~in~D  601 (798)
T PRK14985        526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAPGY---YLAKNIIFAINKVAEVINND  601 (798)
T ss_pred             CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCCCc---HHHHHHHHHHHHHHHHhcCC
Confidence            345677888889999999776 555444   44333 1111124788888854 432   33344444443322      


Q ss_pred             --CCC--cEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        355 --LEN--NVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       355 --l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                        +.+  .|+|+....-.--..++.+||+....|  ..|..|..-+=+|..|.+.|++-.|.+. |+.++-  +.+|||+
T Consensus       602 p~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanv-Ei~e~v--G~eN~f~  678 (798)
T PRK14985        602 PLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV-EIAEQV--GEENIFI  678 (798)
T ss_pred             hhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHH-HHHHHh--CcCcEEE
Confidence              123  689998877777888999999988777  5788999999999999999999988886 887651  1278999


Q ss_pred             cC-CHHHHHHH
Q psy15555        429 AC-DEVEYAQT  438 (488)
Q Consensus       429 ~~-~~~~l~~~  438 (488)
                      +. +.+++.+.
T Consensus       679 fG~~~~ev~~~  689 (798)
T PRK14985        679 FGHTVEQVKAL  689 (798)
T ss_pred             eCCCHHHHHHH
Confidence            87 66666554

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.90  E-value=0.075  Score=55.49  Aligned_cols=146  Identities=17%  Similarity=0.129  Sum_probs=101.4

Q ss_pred             CCCCeEEEEeeccCCCCChHH-HHHH---HHHhHHhhhhhccCceEEEEEecC-CCCCcHHHHHHHHHHHHhcC------
Q psy15555        286 TDGPVKIISVAQFRPEKDHPL-QLRA---MYQLRQIISEELWDNLKLIFIGST-RNEEDEVCVKDMQDLCKHLS------  354 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~-ll~a---~~~l~~~~~~~~~~~~~l~ivG~~-~~~~~~~~~~~l~~~~~~~~------  354 (488)
                      .++....+++-|+...|...+ ++..   +.++++. ++....+..+++.|.- |..   ...+++-+++....      
T Consensus       527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~y---~~aK~iIklI~~va~~in~D  602 (797)
T cd04300         527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKEN-PNADIVPRTFIFGGKAAPGY---YMAKLIIKLINAVADVVNND  602 (797)
T ss_pred             CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhC-CCcCCCCeEEEEeccCCCCc---HHHHHHHHHHHHHHHHhccC
Confidence            456778899999999999887 4444   4445443 1111124778888853 432   23344444433321      


Q ss_pred             --CCC--cEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccccee
Q psy15555        355 --LEN--NVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       355 --l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~  428 (488)
                        +.+  .|.|+....-.--..++.+||+....|  ..|..|..-+=+|..|.+.|++-.|.+. |+.+.-  +.+|+++
T Consensus       603 p~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanv-Ei~e~v--G~eN~fi  679 (797)
T cd04300         603 PDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIAEEV--GEENIFI  679 (797)
T ss_pred             hhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhH-HHHHHh--CcCcEEE
Confidence              233  689998877777888999999988777  5788999999999999999999988886 887761  1278999


Q ss_pred             cC-CHHHHHHH
Q psy15555        429 AC-DEVEYAQT  438 (488)
Q Consensus       429 ~~-~~~~l~~~  438 (488)
                      +. +.+++.+.
T Consensus       680 FG~~~~ev~~~  690 (797)
T cd04300         680 FGLTAEEVEAL  690 (797)
T ss_pred             eCCCHHHHHHH
Confidence            87 66666544

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=95.56  E-value=0.082  Score=44.86  Aligned_cols=86  Identities=21%  Similarity=0.142  Sum_probs=55.2

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhhh--hhhhC---CCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhh
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYPL--FSYIG---GSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSF  223 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~~--~~~~~---~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (488)
                      ..+.+.+++.+||+|++|.+.+..+++  ++...   ++|++..+-+...                      ...     
T Consensus        79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~----------------------~H~-----  131 (169)
T PF06925_consen   79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDT----------------------VHP-----  131 (169)
T ss_pred             HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCC----------------------CCc-----
Confidence            356678889999999999877655522  33222   3454432211100                      000     


Q ss_pred             hHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC
Q psy15555        224 KLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC  273 (488)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~  273 (488)
                                  .++-..+|..++.|+++++.+.+.+-.++++.+.+-|+
T Consensus       132 ------------~W~~~~~D~y~Vase~~~~~l~~~Gi~~~~I~vtGiPV  169 (169)
T PF06925_consen  132 ------------FWIHPGVDRYFVASEEVKEELIERGIPPERIHVTGIPV  169 (169)
T ss_pred             ------------CeecCCCCEEEECCHHHHHHHHHcCCChhHEEEeCccC
Confidence                        02346789999999999999999766667888877654

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=95.51  E-value=1.1  Score=43.42  Aligned_cols=216  Identities=10%  Similarity=0.049  Sum_probs=121.5

Q ss_pred             HhcccCEEEEcChhHHHHHHHHhccCC-ceEEEcCCCCchhhhccC-----------CCCCCCCeEEEEeeccCCCC---
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLWNCQL-KTYKLYPPCDTEDLKKIT-----------HSKTDGPVKIISVAQFRPEK---  302 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~~~~~-k~~vi~~~~d~~~~~~~~-----------~~~~~~~~~i~~~g~~~~~k---  302 (488)
                      ...+.|.+.+.+......+.+.++... ++..++-|.....+....           -..+.++++++|.-++.+..   
T Consensus       145 ~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~  224 (388)
T COG1887         145 VRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDNDVLI  224 (388)
T ss_pred             eeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccCceEEecCCccCCcccc
Confidence            335568899999888888887777654 555665553322222111           11334688999999988776   


Q ss_pred             C---hHHHH--HHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC
Q psy15555        303 D---HPLQL--RAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG  377 (488)
Q Consensus       303 ~---~~~ll--~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a  377 (488)
                      +   ....+  +.+.+...+      .+..+ |+=-||...+     ......   ...+.+..+..  ..++..+|..+
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~------~~~~i-i~k~Hp~is~-----~~~~~~---~~~~~~~~vs~--~~di~dll~~s  287 (388)
T COG1887         225 GTQFFNLDIDIEKLKEKLGE------NEYVI-IVKPHPLISD-----KIDKRY---ALDDFVLDVSD--NADINDLLLVS  287 (388)
T ss_pred             chhhhhhhhhHHHHHHhhcc------CCeEE-EEecChhhhh-----hhhhhh---hccceeEeccc--chhHHHHHhhh
Confidence            1   22222  223222221      24444 4444653211     111110   11222333333  48999999999


Q ss_pred             cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc----cceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHH
Q psy15555        378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK----MDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRI  453 (488)
Q Consensus       378 d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~----~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~  453 (488)
                      |++|.     .++-++.|+|..-+|||..-.....    .....+. ....-|-++++.+++.++|..... +.+...+.
T Consensus       288 DiLIT-----DySSv~fdf~~l~KPiify~~D~~~y~~~rg~~~d~-~~~~Pg~~~~~~~~li~ai~~~~~-~~~~~~~k  360 (388)
T COG1887         288 DILIT-----DYSSVIFDFMLLDKPIIFYTYDLEQYDELRGFYLDY-KFEAPGEVVETQEELIDAIKPYDE-DGNYDLEK  360 (388)
T ss_pred             CEEEe-----echHHHHHHHHhcCcEEEEecChHHHHhhhhhhhhH-HhcCCccccccHHHHHHHHHhhhc-ccchhHHH
Confidence            99886     3466899999999999996432210    0122221 222457777889999999999887 44433333


Q ss_pred             HHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        454 SQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       454 ~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      -+...+....+.-.+..+++.+.+
T Consensus       361 ~~~~~~~~~~~~dg~ss~ri~~~i  384 (388)
T COG1887         361 LRVFNDKFNSYEDGRSSERILKLI  384 (388)
T ss_pred             HHHHHHhhcccccccHHHHHHHHH
Confidence            333333333344455555555443

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=95.45  E-value=0.13  Score=47.41  Aligned_cols=89  Identities=11%  Similarity=0.011  Sum_probs=54.0

Q ss_pred             ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEE
Q psy15555        303 DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLH  382 (488)
Q Consensus       303 ~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~  382 (488)
                      ....+++.+..+.+..     |+.+++|-. ||..........+.+..   + ..++.+...-  ..+.+++..||.++.
T Consensus       138 ~~~~~~~~l~~~~~~~-----p~~~lvvK~-HP~~~~~~~~~~~~~~~---~-~~~~~~~~~~--~~~~~Ll~~s~~Vvt  205 (269)
T PF05159_consen  138 SQADFLDMLESFAKEN-----PDAKLVVKP-HPDERGGNKYSYLEELP---N-LPNVVIIDDD--VNLYELLEQSDAVVT  205 (269)
T ss_pred             cHhHHHHHHHHHHHHC-----CCCEEEEEE-CchhhCCCChhHhhhhh---c-CCCeEEECCC--CCHHHHHHhCCEEEE
Confidence            4456677777777766     788876554 66321111111122211   2 2344444432  578899999996554


Q ss_pred             cCCCCcCCccHHHHHHcCCcEEEeCC
Q psy15555        383 AMWNEHFGIGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       383 ~s~~e~~g~~~lEa~a~G~PvI~~~~  408 (488)
                      -+     +.+-+||+.+|+||++...
T Consensus       206 in-----StvGlEAll~gkpVi~~G~  226 (269)
T PF05159_consen  206 IN-----STVGLEALLHGKPVIVFGR  226 (269)
T ss_pred             EC-----CHHHHHHHHcCCceEEecC
Confidence            33     5688999999999999644

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>KOG1192|consensus

Probab=94.78  E-value=0.34  Score=49.23  Aligned_cols=142  Identities=18%  Similarity=0.160  Sum_probs=76.9

Q ss_pred             CeEEEEeeccCC-----CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcC--CCCcEEE
Q psy15555        289 PVKIISVAQFRP-----EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLS--LENNVEF  361 (488)
Q Consensus       289 ~~~i~~~g~~~~-----~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l~~~v~~  361 (488)
                      ..+++..|+...     ++....++.++..+         +++.++..=+.+..      ..   ..+...  .+.+|..
T Consensus       278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~---------~~~~FiW~~~~~~~------~~---~~~~~~~~~~~nV~~  339 (496)
T KOG1192|consen  278 SVVYISFGSMVNSADLPEEQKKELAKALESL---------QGVTFLWKYRPDDS------IY---FPEGLPNRGRGNVVL  339 (496)
T ss_pred             CeEEEECCcccccccCCHHHHHHHHHHHHhC---------CCceEEEEecCCcc------hh---hhhcCCCCCcCceEE
Confidence            456666676642     23333444444443         46667777665422      11   111111  1347899


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCC-ccHHHHHHcCCcEEEeCCC----CCccceeccCCCccccceecC---CHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFG-IGIVECMAAGLIMIAHKSG----GPKMDIVIEDPETCRNGFLAC---DEV  433 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g-~~~lEa~a~G~PvI~~~~~----~~~~eiv~~~~~~~~~g~~~~---~~~  433 (488)
                      .+++|+.++.  +....+..+-+   ++| .+++|++.+|+|+|+.+.-    .+...+.+.+    ..+....   +..
T Consensus       340 ~~W~PQ~~ll--l~H~~v~~FvT---HgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g----~~~v~~~~~~~~~  410 (496)
T KOG1192|consen  340 SKWAPQNDLL--LDHPAVGGFVT---HGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHG----GGGVLDKRDLVSE  410 (496)
T ss_pred             ecCCCcHHHh--cCCCcCcEEEE---CCcccHHHHHHhcCCceecCCccccchhHHHHHHhCC----CEEEEehhhcCcH
Confidence            9999988876  22222222211   223 4579999999999975542    2332344443    3344432   233


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHH
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAV  458 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~  458 (488)
                      ++.+++..++. +++..+...+-+.
T Consensus       411 ~~~~~~~~il~-~~~y~~~~~~l~~  434 (496)
T KOG1192|consen  411 ELLEAIKEILE-NEEYKEAAKRLSE  434 (496)
T ss_pred             HHHHHHHHHHc-ChHHHHHHHHHHH
Confidence            38888889887 6665555444443

>KOG0780|consensus

Probab=94.63  E-value=1.9  Score=40.81  Aligned_cols=167  Identities=10%  Similarity=0.121  Sum_probs=94.6

Q ss_pred             eccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEe-cCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCC-----hHH
Q psy15555        296 AQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIG-STRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLP-----YED  369 (488)
Q Consensus       296 g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG-~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~-----~~e  369 (488)
                      |..+.-+-.....+...+.+++       ++.++|+- +|+...+.+.++++.+..+..+ +++|.|+=.-+     .+.
T Consensus       161 gsyte~dpv~ia~egv~~fKke-------~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQaae~Q  232 (483)
T KOG0780|consen  161 GSYTEADPVKIASEGVDRFKKE-------NFDVIIVDTSGRHKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQAAEAQ  232 (483)
T ss_pred             ecccccchHHHHHHHHHHHHhc-------CCcEEEEeCCCchhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHhHHHH
Confidence            4445556666777777777764       66777764 2344455678888888888777 67777753221     122


Q ss_pred             HHHHHHhCcE--EEEcCC----CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec--CCHHHHHHHHHH
Q psy15555        370 MKKEFSEGLI--GLHAMW----NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEVEYAQTIKL  441 (488)
Q Consensus       370 l~~~~~~ad~--~v~~s~----~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~--~~~~~l~~~i~~  441 (488)
                      ...+=...|+  .|.+-.    ..++.++..  .+.++|||.-..|..- +-++..+...-.+-+.  .|.+.|.+.+.+
T Consensus       233 a~aFk~~vdvg~vIlTKlDGhakGGgAlSaV--aaTksPIiFIGtGEhm-dDlE~F~pk~FvsrlLGmGDi~glvek~~e  309 (483)
T KOG0780|consen  233 ARAFKETVDVGAVILTKLDGHAKGGGALSAV--AATKSPIIFIGTGEHM-DDLEPFDPKPFVSRLLGMGDIEGLVEKVQE  309 (483)
T ss_pred             HHHHHHhhccceEEEEecccCCCCCceeeeh--hhhCCCEEEEecCccc-cccCCCChHHHHHHHhccccHHHHHHHHHH
Confidence            3333344552  344331    122234444  4579999997766554 2222220000111112  289999999998


Q ss_pred             HHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        442 ILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       442 ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +...|.+...+.-..     .+|+...+.+++.++++
T Consensus       310 v~~~d~~el~~kl~~-----gkFtlrd~y~Qfq~imk  341 (483)
T KOG0780|consen  310 VGKDDAKELVEKLKQ-----GKFTLRDFYDQFQNIMK  341 (483)
T ss_pred             HhhhhHHHHHHHHHh-----CCccHHHHHHHHHHHHh
Confidence            873243333222222     57898888888877764

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=94.62  E-value=1.6  Score=36.87  Aligned_cols=28  Identities=14%  Similarity=0.233  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHHHhhhcCCcEEEecCCcc
Q psy15555        143 QSIGSMILGVEALLSFQPDIYIDTMGYA  170 (488)
Q Consensus       143 ~~~~~~~~~~~~l~~~~pDiii~~~~~~  170 (488)
                      ..+.+.....+.+.+.+||+|+++.+..
T Consensus        76 ~~l~~~~~~~~il~r~rPdvii~nGpg~  103 (170)
T PF08660_consen   76 TTLRAFLQSLRILRRERPDVIISNGPGT  103 (170)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEcCCce
Confidence            3344445566778888999999886443

>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.67  E-value=4.9  Score=36.76  Aligned_cols=214  Identities=12%  Similarity=0.084  Sum_probs=113.5

Q ss_pred             hcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC-CCCCCCCeE-EEEeecc--CCCCChHHHHHHHHH
Q psy15555        239 GKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT-HSKTDGPVK-IISVAQF--RPEKDHPLQLRAMYQ  313 (488)
Q Consensus       239 ~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~-~~~~~~~~~-i~~~g~~--~~~k~~~~ll~a~~~  313 (488)
                      -++|-.++.-...+.+.+... +++  ...+.|+ .|.-...... ........+ -+-.|.-  +.+.+...++.++..
T Consensus       176 ~rrc~~vf~rD~~Taq~L~~r-gvn--a~~vGnpmmD~L~p~~~~~q~l~~g~~viaLLPGsR~pea~~nl~~il~slca  252 (412)
T COG4370         176 RRRCWAVFPRDALTAQHLANR-GVN--AAYVGNPMMDGLPPPERDPQLLLTGVPVIALLPGSRVPEAQTNLAVILGSLCA  252 (412)
T ss_pred             cccceeeeccccccHHHHHhc-CCc--hhhccChhhccCCCccCCchhhccCCceEEecCCCCChHHHhhHHHHHHHHhh
Confidence            367777888777888888774 333  4555665 2321110000 111122233 3334433  235677888887777


Q ss_pred             hHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC--------CcEEEecCCChHHHHHHHHhCcEEEEcCC
Q psy15555        314 LRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE--------NNVEFKVNLPYEDMKKEFSEGLIGLHAMW  385 (488)
Q Consensus       314 l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------~~v~~~g~~~~~el~~~~~~ad~~v~~s~  385 (488)
                      +....     ..  +++.+.-..+-.   ..-+..+.++.|..        ++..+.  .+.+...+++..+|+.+... 
T Consensus       253 l~~~~-----a~--vvfw~ai~~~lp---l~~l~~l~e~~gWq~~ad~~~kdnc~l~--lsqqsfadiLH~adaalgmA-  319 (412)
T COG4370         253 LPAMF-----AL--VVFWAAIAPELP---LLLLWTLEERQGWQPLADRFGKDNCSLW--LSQQSFADILHAADAALGMA-  319 (412)
T ss_pred             hHHHH-----HH--HHHHhccCcCCC---HHHHHHHHHhcCcchhhhhhccCceEEE--EeHHHHHHHHHHHHHHHHhc-
Confidence            76654     12  122222211111   13445555554432        233332  24478888899999644322 


Q ss_pred             CCcCCccHHHHHHcCCcEEEeCCCCCccce--eccC--CCccccceecCCHHHHHHHHHH-HHccCHHHHHHHHHHHHHH
Q psy15555        386 NEHFGIGIVECMAAGLIMIAHKSGGPKMDI--VIED--PETCRNGFLACDEVEYAQTIKL-ILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       386 ~e~~g~~~lEa~a~G~PvI~~~~~~~~~ei--v~~~--~~~~~~g~~~~~~~~l~~~i~~-ll~~~~~~~~~~~~~a~~~  460 (488)
                          |...=.+...|+|||..+.-|+. -.  +...  ..-+..-.++..+.+-+..+.+ ++. |++....+..++++.
T Consensus       320 ----GTAtEQavGLGkPvi~fPg~GPQ-y~pgFA~rQ~rLLG~sltlv~~~aq~a~~~~q~ll~-dp~r~~air~nGqrR  393 (412)
T COG4370         320 ----GTATEQAVGLGKPVIGFPGQGPQ-YNPGFAERQQRLLGASLTLVRPEAQAAAQAVQELLG-DPQRLTAIRHNGQRR  393 (412)
T ss_pred             ----cchHHHhhccCCceeecCCCCCC-cChHHHHHHHHHhcceeeecCCchhhHHHHHHHHhc-ChHHHHHHHhcchhh
Confidence                55666788999999998775552 10  0000  0000112334444444555555 998 999999999999987


Q ss_pred             H-hhcCHHHHHHHHH
Q psy15555        461 V-DRFSMEEFKNGFL  474 (488)
Q Consensus       461 ~-~~~s~~~~~~~~~  474 (488)
                      + +--...++++.+.
T Consensus       394 iGqaGaa~rIAe~l~  408 (412)
T COG4370         394 IGQAGAARRIAEELG  408 (412)
T ss_pred             ccCcchHHHHHHHHH
Confidence            7 5554444444443

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=92.86  E-value=8.6  Score=36.29  Aligned_cols=256  Identities=12%  Similarity=0.128  Sum_probs=142.3

Q ss_pred             CCcEEEecCC--ccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHH
Q psy15555        159 QPDIYIDTMG--YAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYS  236 (488)
Q Consensus       159 ~pDiii~~~~--~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (488)
                      +.||+|+...  -+.....++ .+|.|++.++.......++...++++..          ...                 
T Consensus        73 ~lDVlIEmg~ql~~~~~~~~~-~~G~KvV~y~~GndYv~~~E~~lF~k~~----------~~~-----------------  124 (364)
T PF10933_consen   73 ELDVLIEMGAQLDPEWLDYMR-ARGGKVVSYRCGNDYVMDIESMLFNKPS----------GHL-----------------  124 (364)
T ss_pred             cCCEEEEccCccCHHHHHHHH-HcCCeEEEEeCCchHHHHhhHHhcCCCC----------Ccc-----------------
Confidence            7999997752  223333444 7899999999877665555554444310          000                 


Q ss_pred             HHhcccCEEEEcChhH---HHHHHHHhccCCceEEEcCCCCchhhhccCCCC------------CCCCeEEEEeeccCCC
Q psy15555        237 HVGKYSDIIMVNSSWT---EEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSK------------TDGPVKIISVAQFRPE  301 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~---~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~------------~~~~~~i~~~g~~~~~  301 (488)
                      ..-...|.|.+.-+.+   +..+......|  +.++|..-++..+.......            ...+.+-++=-++.--
T Consensus       125 f~~~~yD~VW~lPq~~~~~~~yl~~l~r~P--v~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vv  202 (364)
T PF10933_consen  125 FNGAPYDEVWTLPQFENTCAPYLETLHRCP--VRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVV  202 (364)
T ss_pred             CCCCCCceeEeccchhhhchHHHHHHhcCC--ceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEE
Confidence            0123457777665533   34555554444  77777655544333221111            1112222222222222


Q ss_pred             CChHHHHHHHHHhHHhhhhhccCc-eEEEEEecC-CCCCcHHHHHHHHHHHHhcCC--CCcEEEecCCChHHHHHHHHh-
Q psy15555        302 KDHPLQLRAMYQLRQIISEELWDN-LKLIFIGST-RNEEDEVCVKDMQDLCKHLSL--ENNVEFKVNLPYEDMKKEFSE-  376 (488)
Q Consensus       302 k~~~~ll~a~~~l~~~~~~~~~~~-~~l~ivG~~-~~~~~~~~~~~l~~~~~~~~l--~~~v~~~g~~~~~el~~~~~~-  376 (488)
                      |....=+-+..+.-+..     |+ +..+.+-.. ..++.    .++...+..+.+  .....|.|..   +++.+++. 
T Consensus       203 K~~~~PmLi~E~aYR~~-----P~~v~~~~V~Nt~~~ke~----~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~  270 (364)
T PF10933_consen  203 KTCFIPMLICEEAYRAD-----PDAVEHVYVTNTYHLKEH----PTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQH  270 (364)
T ss_pred             eecCccHHHHHHHHHhC-----hhhcceEEEecchhhhcC----HHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhC
Confidence            43211122223333333     33 333333322 22222    344444444433  3457788886   45555544 


Q ss_pred             CcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHH
Q psy15555        377 GLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       377 ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~  454 (488)
                      .|++|.--+..+.-..-+|++.-|=|.|-..      ..+.      ++|+..+  |..+=++++.+.+....+..+...
T Consensus       271 tD~VvSHqWeN~lNYlY~daLyggYPLVHNS------~~l~------d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~  338 (364)
T PF10933_consen  271 TDAVVSHQWENPLNYLYYDALYGGYPLVHNS------PLLK------DVGYYYPDFDAFEGARQLLRAIREHDADLDAYR  338 (364)
T ss_pred             CCEEEeccccchhhHHHHHHHhcCCCcccCc------chhc------ccCcCCCCccHHHHHHHHHHHHHHccccHHHHH
Confidence            5788876676666667789999999988432      2333      3588877  888888888888776778888899


Q ss_pred             HHHHHHHhhcCHHH
Q psy15555        455 QNAVSSVDRFSMEE  468 (488)
Q Consensus       455 ~~a~~~~~~~s~~~  468 (488)
                      +++++.+.+++...
T Consensus       339 ~ra~~~l~~~~p~n  352 (364)
T PF10933_consen  339 ARARRLLDRLSPEN  352 (364)
T ss_pred             HHHHHHHHhhCCCC
Confidence            99998887777654

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=92.83  E-value=0.57  Score=35.40  Aligned_cols=75  Identities=7%  Similarity=0.042  Sum_probs=49.3

Q ss_pred             EEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe---cCCChHH--HHHHHHhCcEEEEcCCCCcCCccH-----HHHH
Q psy15555        328 LIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK---VNLPYED--MKKEFSEGLIGLHAMWNEHFGIGI-----VECM  397 (488)
Q Consensus       328 l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~---g~~~~~e--l~~~~~~ad~~v~~s~~e~~g~~~-----lEa~  397 (488)
                      +.|+|+..     .+...+++.+++.|..  ..++   +.....+  +...+..||++|.....  -+|..     -+|-
T Consensus         2 vliVGG~~-----~~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~--vsH~~~~~vk~~ak   72 (97)
T PF10087_consen    2 VLIVGGRE-----DRERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDY--VSHNAMWKVKKAAK   72 (97)
T ss_pred             EEEEcCCc-----ccHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCC--cChHHHHHHHHHHH
Confidence            56788754     3347889999998864  4444   3333344  99999999966554422  13332     3677


Q ss_pred             HcCCcEEEeCCCCC
Q psy15555        398 AAGLIMIAHKSGGP  411 (488)
Q Consensus       398 a~G~PvI~~~~~~~  411 (488)
                      ..|+|++.++..+.
T Consensus        73 k~~ip~~~~~~~~~   86 (97)
T PF10087_consen   73 KYGIPIIYSRSRGV   86 (97)
T ss_pred             HcCCcEEEECCCCH
Confidence            78999999986554

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=90.31  E-value=14  Score=33.63  Aligned_cols=85  Identities=14%  Similarity=0.028  Sum_probs=52.0

Q ss_pred             HHHHhcCCCC-c-EEEecCCChHHHHHHHHhCc--EEEEcCCCCcCC--ccHHHHHHcCCcEEEeCCCCCccceeccCCC
Q psy15555        348 DLCKHLSLEN-N-VEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFG--IGIVECMAAGLIMIAHKSGGPKMDIVIEDPE  421 (488)
Q Consensus       348 ~~~~~~~l~~-~-v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g--~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~  421 (488)
                      +.+.++|++. + +-..|..+.+.=.++++..+  ++|.--..+.+|  -++--|..+|+|||.-.-+...         
T Consensus       165 ~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~---------  235 (256)
T TIGR00715       165 AQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTI---------  235 (256)
T ss_pred             HHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCC---------
Confidence            3667777753 3 44456666665567777666  444432333333  3566788889999998764321         


Q ss_pred             ccccceecCCHHHHHHHHHHHH
Q psy15555        422 TCRNGFLACDEVEYAQTIKLIL  443 (488)
Q Consensus       422 ~~~~g~~~~~~~~l~~~i~~ll  443 (488)
                        ...-.+.+.+++.+.+.+++
T Consensus       236 --~~~~~~~~~~el~~~l~~~~  255 (256)
T TIGR00715       236 --PGVAIFDDISQLNQFVARLL  255 (256)
T ss_pred             --CCCccCCCHHHHHHHHHHhc
Confidence              11244668888888887654

This enzyme was found to be a monomer by gel filtration.

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=90.08  E-value=2.5  Score=41.65  Aligned_cols=129  Identities=19%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             cEEEEeccC----------CCCCCCceehHHHHHHHHHHhC----------CCeeEEEEeCC-CCCChhHHHHHhhhhcc
Q psy15555         53 KTVAFFHPY----------CNAGGGGERVLWTAVLALHQKY----------PDYKIYIYTGD-VDASPSEIIKRAHQRFN  111 (488)
Q Consensus        53 ~rI~~~~~~----------~~~~gG~e~~~~~l~~~L~~~~----------~~~~v~~~~~~-~~~~~~~~~~~~~~~~~  111 (488)
                      -+|+++++.          .+.+||-..++.+++++|.+..          -..+|.+.|.- ++.....+-+......+
T Consensus       273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~g  352 (550)
T PF00862_consen  273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVSG  352 (550)
T ss_dssp             SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEETT
T ss_pred             EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccCC
Confidence            367776542          1245566688999999997641          12345565542 11111111111111111


Q ss_pred             cccCCCeeEEEEeeccc-------eeec-cCchhHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCCccchhh-hhhhhC
Q psy15555        112 IVLPDQVINFVYLYRRK-------FVEA-SLYPYFTLLGQSIGSMILGVEALL--SFQPDIYIDTMGYAFTYP-LFSYIG  180 (488)
Q Consensus       112 ~~~~~~~v~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~-~~~~~~  180 (488)
                         ..+ ..++++|.+.       |+.+ ..|+++..+..-.     ...+..  ...||+||.+..-.+..+ +++.+-
T Consensus       353 ---t~~-a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~-----~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l  423 (550)
T PF00862_consen  353 ---TEN-ARILRVPFGPEKGILRKWISRFDLWPYLEEFADDA-----EREILAELQGKPDLIIGNYSDGNLVASLLSRKL  423 (550)
T ss_dssp             ---ESS-EEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHH-----HHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred             ---CCC-cEEEEecCCCCcchhhhccchhhchhhHHHHHHHH-----HHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence               123 5566665543       3332 3455554332211     111222  357999987754344433 334466


Q ss_pred             CCeeEEEEeC
Q psy15555        181 GSKVACYIHY  190 (488)
Q Consensus       181 ~~~~v~~~h~  190 (488)
                      ++|....-|.
T Consensus       424 gv~~~~iaHs  433 (550)
T PF00862_consen  424 GVTQCFIAHS  433 (550)
T ss_dssp             T-EEEEE-SS
T ss_pred             CCceehhhhc
Confidence            8898888884

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=86.59  E-value=1.1  Score=42.07  Aligned_cols=49  Identities=16%  Similarity=0.163  Sum_probs=36.5

Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-cEEEeCC-CCCcccee
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-IMIAHKS-GGPKMDIV  416 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-PvI~~~~-~~~~~eiv  416 (488)
                      .+..+.|+.|...+.|.....+..-++|||++|| |||.++. .-++++++
T Consensus       228 ~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l  278 (302)
T PF03016_consen  228 SEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL  278 (302)
T ss_pred             hHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc
Confidence            5688999999977777766668889999999998 5665554 33444555

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=83.63  E-value=14  Score=33.90  Aligned_cols=92  Identities=20%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             CCcEEEecC-Cccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHH
Q psy15555        159 QPDIYIDTM-GYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYS  236 (488)
Q Consensus       159 ~pDiii~~~-~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (488)
                      +.||+|+.+ ++..++. .++...|.|.+++-|.-..        ..+.........+   ......+..+.+.+..+.+
T Consensus       172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~--------RER~~ei~~a~w~---~~~~~~r~~wi~~f~~l~~  240 (268)
T PF11997_consen  172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYT--------REREIEILQADWI---WESPYVRDLWIRFFESLSR  240 (268)
T ss_pred             CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccH--------HHHHHHHHhcccc---cchHHHHHHHHHHHHHHHH
Confidence            357999554 5555544 3455779999999996542        1111111111100   0124555666677777888


Q ss_pred             HHhcccCEEEEcChhHHHHHHHHhc
Q psy15555        237 HVGKYSDIIMVNSSWTEEHVIQLWN  261 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~~~~~~~~~~  261 (488)
                      .+.+.||.|+..++..++.-.+.+.
T Consensus       241 ~~Y~~Ad~I~~l~~~n~~~q~~~Ga  265 (268)
T PF11997_consen  241 LAYRAADRITPLYEYNREWQIELGA  265 (268)
T ss_pred             HHHHhhCeecccchhhHHHHHHhCC
Confidence            8899999999999987766666544

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=83.29  E-value=0.99  Score=35.93  Aligned_cols=44  Identities=9%  Similarity=0.120  Sum_probs=30.5

Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP  411 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~  411 (488)
                      +++.+++..+|++|-.|..+..--.+-.++.+|+|+|++..|..
T Consensus        59 ~~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~  102 (124)
T PF01113_consen   59 DDLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFS  102 (124)
T ss_dssp             S-HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred             hhHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCC
Confidence            56888888899998887655555566778889999999877654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG3339|consensus

Probab=82.79  E-value=19  Score=30.35  Aligned_cols=39  Identities=15%  Similarity=0.139  Sum_probs=22.2

Q ss_pred             cccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCC
Q psy15555         51 VLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGD   94 (488)
Q Consensus        51 ~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~   94 (488)
                      ++..+..+.   + .||-..-+..|.+.|.+.+-.-.+ +...+
T Consensus        37 ~s~~~lVvl---G-SGGHT~EMlrLl~~l~~~y~~r~y-I~a~t   75 (211)
T KOG3339|consen   37 KSLSTLVVL---G-SGGHTGEMLRLLEALQDLYSPRSY-IAADT   75 (211)
T ss_pred             CcceEEEEE---c-CCCcHHHHHHHHHHHHhhcCceEE-EEecC
Confidence            344666543   2 233445678888999888744443 34433

>KOG1021|consensus

Probab=82.57  E-value=21  Score=35.76  Aligned_cols=87  Identities=14%  Similarity=0.155  Sum_probs=57.5

Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-cEEEeCC-CCCccceeccCCCccccceecCCHHHHHHHHHHHH-c
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-IMIAHKS-GGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLIL-H  444 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-PvI~~~~-~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll-~  444 (488)
                      ....+.++.|...+.|...+...-.++||+.+|| |||.++. ..++.+.++-.    .-++.++ .+++-+.+.+.| .
T Consensus       335 ~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~----~fSV~v~-~~~v~~~~~~iL~~  409 (464)
T KOG1021|consen  335 LNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWT----EFSVFVP-EKDVPELIKNILLS  409 (464)
T ss_pred             chHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccce----EEEEEEE-HHHhhhHHHHHHHh
Confidence            5778889999998999988888889999999997 7777776 34443333322    3445555 555555534433 3


Q ss_pred             cCHHHHHHHHHHHHH
Q psy15555        445 LSQDTKTRISQNAVS  459 (488)
Q Consensus       445 ~~~~~~~~~~~~a~~  459 (488)
                      ...+...+|.++...
T Consensus       410 i~~~~~~~m~~~v~~  424 (464)
T KOG1021|consen  410 IPEEEVLRMRENVIR  424 (464)
T ss_pred             cCHHHHHHHHHHHHH
Confidence            344555666666554

>KOG3349|consensus

Probab=82.51  E-value=10  Score=30.83  Aligned_cols=97  Identities=12%  Similarity=0.047  Sum_probs=58.8

Q ss_pred             CeEEEEeeccCCCCChHHHHHH------HHHhHHhhhhhccCceEEEE-EecC-CCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRA------MYQLRQIISEELWDNLKLIF-IGST-RNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a------~~~l~~~~~~~~~~~~~l~i-vG~~-~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                      ..+++.+|+-.    .+.++.+      ...|.+.+      =.+|+| .|+| +.-+     +......+..|+  .|.
T Consensus         4 ~~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G------~~kLiiQ~Grg~~~~~-----d~~~~~~k~~gl--~id   66 (170)
T KOG3349|consen    4 MTVFVTVGTTS----FDDLISCVLSEEFLQELQKRG------FTKLIIQIGRGQPFFG-----DPIDLIRKNGGL--TID   66 (170)
T ss_pred             eEEEEEecccc----HHHHHHHHcCHHHHHHHHHcC------ccEEEEEecCCccCCC-----CHHHhhcccCCe--EEE
Confidence            45778888643    5555544      33444432      335555 7887 3221     222222233333  255


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~  408 (488)
                      ...+-  .++.+.++.||++|+-    ++.-+.+|-+..|+|.|+-.+
T Consensus        67 ~y~f~--psl~e~I~~AdlVIsH----AGaGS~letL~l~KPlivVvN  108 (170)
T KOG3349|consen   67 GYDFS--PSLTEDIRSADLVISH----AGAGSCLETLRLGKPLIVVVN  108 (170)
T ss_pred             EEecC--ccHHHHHhhccEEEec----CCcchHHHHHHcCCCEEEEeC
Confidence            55555  7888999999988852    334589999999999998654

>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=82.21  E-value=15  Score=29.45  Aligned_cols=103  Identities=14%  Similarity=0.195  Sum_probs=62.7

Q ss_pred             HHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcc
Q psy15555        344 KDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETC  423 (488)
Q Consensus       344 ~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~  423 (488)
                      ++..+.+++ +.  .|.+.+..+.+++.+.+..+|+++..+.. .+.-.+++.+ -++..|++...|.- .+--+  ...
T Consensus         9 ~~~~~~l~~-~~--~v~~~~~~~~~~~~~~l~~~d~ii~~~~~-~~~~~~l~~~-~~Lk~I~~~~~G~d-~id~~--~a~   80 (133)
T PF00389_consen    9 DEEIERLEE-GF--EVEFCDSPSEEELAERLKDADAIIVGSGT-PLTAEVLEAA-PNLKLISTAGAGVD-NIDLE--AAK   80 (133)
T ss_dssp             HHHHHHHHH-TS--EEEEESSSSHHHHHHHHTTESEEEESTTS-TBSHHHHHHH-TT-SEEEESSSSCT-TB-HH--HHH
T ss_pred             HHHHHHHHC-Cc--eEEEeCCCCHHHHHHHhCCCeEEEEcCCC-CcCHHHHhcc-ceeEEEEEcccccC-cccHH--HHh
Confidence            334444444 43  68888888899999999999988865433 4667788888 88899988776652 32111  112


Q ss_pred             ccceecC-----CHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy15555        424 RNGFLAC-----DEVEYAQTIKLILHLSQDTKTRISQNAV  458 (488)
Q Consensus       424 ~~g~~~~-----~~~~l~~~i~~ll~~~~~~~~~~~~~a~  458 (488)
                      ..|+.+.     +.++.++..   .. ..+.+.++.+.+.
T Consensus        81 ~~gI~V~n~~g~~~~aVAE~a---~~-T~e~~~~~~~~~~  116 (133)
T PF00389_consen   81 ERGIPVTNVPGYNAEAVAEHA---GY-TDEARERMAEIAA  116 (133)
T ss_dssp             HTTSEEEE-TTTTHHHHHHHH---TG-BHHHHHHHHHHHH
T ss_pred             hCeEEEEEeCCcCCcchhccc---hh-HHHHHHHHHHHHH
Confidence            4566653     444555544   22 4555555554443

The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=81.14  E-value=51  Score=31.33  Aligned_cols=136  Identities=12%  Similarity=0.019  Sum_probs=72.3

Q ss_pred             CceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC----CChHHHH----HHHHhCcEEEEcC--CCCcCCccH
Q psy15555        324 DNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN----LPYEDMK----KEFSEGLIGLHAM--WNEHFGIGI  393 (488)
Q Consensus       324 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~----~~~~el~----~~~~~ad~~v~~s--~~e~~g~~~  393 (488)
                      .+-++.++|.|      +..+...+...+.|. .++.+...    ++.+++.    .+...+|+++..|  ..-..++..
T Consensus       173 ~~k~vLvIGaG------em~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~t~~Tas~~p~i~  245 (338)
T PRK00676        173 KKASLLFIGYS------EINRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFGSSESAYAFPHLS  245 (338)
T ss_pred             cCCEEEEEccc------HHHHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccCCCEEEEcCCcCCCCCceee
Confidence            35577777877      444555555555564 24444433    2345444    6677999888753  233335555


Q ss_pred             HHHHHcCCcEEEeCCCCCcccee--ccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHH
Q psy15555        394 VECMAAGLIMIAHKSGGPKMDIV--IEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKN  471 (488)
Q Consensus       394 lEa~a~G~PvI~~~~~~~~~eiv--~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~  471 (488)
                      .|.+..-.+-+.-|..-++ ++-  ...    .+..++ |.|++.+.+.+    +.+.|++....+...+     +..+.
T Consensus       246 ~~~~~~~~~r~~iDLAvPR-dId~v~~~----~~v~Ly-~iDdL~~i~~~----n~~~R~~~~~~ae~iI-----~~~~~  310 (338)
T PRK00676        246 WESLADIPDRIVFDFNVPR-TFPWSETP----FPHRYL-DMDFISEWVQK----HLQCRKEVNNKHKLSL-----REAAY  310 (338)
T ss_pred             HHHHhhccCcEEEEecCCC-CCcccccc----CCcEEE-EhHHHHHHHHH----HHHHHHHHHHHHHHHH-----HHHHH
Confidence            5655432223555554443 442  111    222333 77777776665    4445666666665444     44556


Q ss_pred             HHHHHHHHhh
Q psy15555        472 GFLTFTQPLF  481 (488)
Q Consensus       472 ~~~~~~~~~~  481 (488)
                      ++.+.|++=.
T Consensus       311 ~~~~~~~~~~  320 (338)
T PRK00676        311 KQWESYEKKL  320 (338)
T ss_pred             HHHHHHHHHH
Confidence            6666666533

>PF06692 MNSV_P7B: Melon necrotic spot virus P7B protein; InterPro: IPR009575 This family consists of several Melon necrotic spot virus (MNSV) P7B proteins

Probab=80.83  E-value=1.7  Score=27.93  Aligned_cols=12  Identities=33%  Similarity=0.393  Sum_probs=10.3

Q ss_pred             CceecccchhHH
Q psy15555          1 MFCCLWKSVVMW   12 (488)
Q Consensus         1 ~~~~~~~~~~~~   12 (488)
                      |-||+|.|.+.-
T Consensus         1 m~c~rc~~~p~d   12 (61)
T PF06692_consen    1 MACCRCDSAPGD   12 (61)
T ss_pred             CcccccCCCCcc
Confidence            889999999863

The function of this family is unknown.

>COG3340 PepE Peptidase E [Amino acid transport and metabolism]

Probab=80.51  E-value=33  Score=29.88  Aligned_cols=84  Identities=20%  Similarity=0.248  Sum_probs=55.9

Q ss_pred             EEEEEec-CCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCc-EEEEcC--------CCCc-CCccHHH
Q psy15555        327 KLIFIGS-TRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGL-IGLHAM--------WNEH-FGIGIVE  395 (488)
Q Consensus       327 ~l~ivG~-~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad-~~v~~s--------~~e~-~g~~~lE  395 (488)
                      +..+++. +...+...|.++.++..+++|+.-.=.-+...|.+++.+.+..+| +.|++.        +.|. .-..+.|
T Consensus        34 ~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~iIr~  113 (224)
T COG3340          34 TIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDDIIRE  113 (224)
T ss_pred             eEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHHHHHH
Confidence            5566663 334455578899999999998753222334447799999999999 455442        1122 1234679


Q ss_pred             HHHcCCcEEEeCCCC
Q psy15555        396 CMAAGLIMIAHKSGG  410 (488)
Q Consensus       396 a~a~G~PvI~~~~~~  410 (488)
                      ....|+|.|....|.
T Consensus       114 ~vk~G~~YiG~SAGA  128 (224)
T COG3340         114 RVKAGTPYIGWSAGA  128 (224)
T ss_pred             HHHcCCceEEeccCc
Confidence            999999999865553

>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems

Probab=80.36  E-value=26  Score=32.66  Aligned_cols=154  Identities=11%  Similarity=0.063  Sum_probs=68.8

Q ss_pred             HhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-CchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHH
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQ  316 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~  316 (488)
                      .-...|.|++........+.+.....  +-++..++ |+....-.......++. +.-+.   ........++.++++. 
T Consensus        56 ~~~~~DlIi~~gt~aa~~~~~~~~~~--iPVVf~~V~dp~~~~l~~~~~~~~~n-vTGv~---~~~~~~~~l~l~~~l~-  128 (294)
T PF04392_consen   56 KAQKPDLIIAIGTPAAQALAKHLKDD--IPVVFCGVSDPVGAGLVDSLDRPGKN-VTGVS---ERPPIEKQLELIKKLF-  128 (294)
T ss_dssp             CCTS-SEEEEESHHHHHHHHHH-SS---S-EEEECES-TTTTTS-S-SSS--SS-EEEEE---E---HHHHHHHHHHHS-
T ss_pred             hcCCCCEEEEeCcHHHHHHHHhcCCC--cEEEEEeccChhhhhccccccCCCCC-EEEEE---CCcCHHHHHHHHHHhC-
Confidence            34578999999988877777755432  33444454 32221111111111122 22222   2344555566666654 


Q ss_pred             hhhhhccCceEEE-EEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH----hCcEEEEcCC---CCc
Q psy15555        317 IISEELWDNLKLI-FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS----EGLIGLHAMW---NEH  388 (488)
Q Consensus       317 ~~~~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~----~ad~~v~~s~---~e~  388 (488)
                             |+++=+ ++-+..........+.+++.+++.|+.  +....--+.+|+...+.    ..|+++.+..   ...
T Consensus       129 -------P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~--l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~  199 (294)
T PF04392_consen  129 -------PDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIE--LVEIPVPSSEDLEQALEALAEKVDALYLLPDNLVDSN  199 (294)
T ss_dssp             -------TT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-E--EEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHT
T ss_pred             -------CCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCE--EEEEecCcHhHHHHHHHHhhccCCEEEEECCcchHhH
Confidence                   554433 333221111234557888888888874  33222223356555554    5675555431   122


Q ss_pred             CCccHHHHHHcCCcEEEeC
Q psy15555        389 FGIGIVECMAAGLIMIAHK  407 (488)
Q Consensus       389 ~g~~~lEa~a~G~PvI~~~  407 (488)
                      +......+...++||+++.
T Consensus       200 ~~~i~~~~~~~~iPv~~~~  218 (294)
T PF04392_consen  200 FEAILQLANEAKIPVFGSS  218 (294)
T ss_dssp             HHHHHHHCCCTT--EEESS
T ss_pred             HHHHHHHHHhcCCCEEECC
Confidence            2223445667899999864

ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	488
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	5e-17
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	9e-17
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	7e-16
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	1e-14
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	2e-12
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	3e-11
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-10
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	5e-10
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	2e-08
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	4e-08
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	4e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	5e-04

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 28/196 (14%)

Query: 270 YPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI 329
             P +T   K     K  G    +SV +  PEK   LQL    +L+         + KL 
Sbjct: 9   SHPVETSKFK----FKCYGDF-WLSVNRIYPEKRIELQLEVFKKLQ---------DEKLY 54

Query: 330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF 389
            +G     +     +        +   +NV+F  ++  E++   +S     L    +E F
Sbjct: 55  IVGWFSKGDH---AERYARKIMKI-APDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDF 110

Query: 390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVE-YAQTIKLILHLSQD 448
           G+  +E MA+G  +IA   GG K + VI +      G+L   +V      +K +      
Sbjct: 111 GLTPIEAMASGKPVIAVNEGGFK-ETVINEK----TGYLVNADVNEIIDAMKKVSKNPD- 164

Query: 449 TKTRISQNAVSSVDRF 464
              +  ++       F
Sbjct: 165 ---KFKKDCFRRAKEF 177

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 76.8 bits (190), Expect = 9e-17
 Identities = 28/180 (15%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQD 348
           P KI  V ++  EK+  + ++A+   +         ++ L+  G   +E+       ++ 
Sbjct: 2   PFKIAMVGRYSNEKNQSVLIKAVALSKYK------QDIVLLLKGKGPDEK------KIKL 49

Query: 349 LCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS 408
           L + L ++    F   +   ++ +      + +HA   E   I  +E ++ G++ +   S
Sbjct: 50  LAQKLGVKAEFGF---VNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANS 106

Query: 409 GGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEE 468
                     D    R+ F   +  + +  I   L  ++  + R+      S   +++E 
Sbjct: 107 PLSATRQFALD---ERSLFEPNNAKDLSAKIDWWLE-NKLERERMQNEYAKSALNYTLEN 162

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score = 78.1 bits (193), Expect = 7e-16
 Identities = 67/414 (16%), Positives = 134/414 (32%), Gaps = 80/414 (19%)

Query: 66  GGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLY 125
           GG   V       L ++   ++I+  T  +    +++                   +Y +
Sbjct: 27  GGSGVVGTELGKQLAER--GHEIHFITSGLPFRLNKVYPN----------------IYFH 68

Query: 126 RRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVA 185
               V  + Y  F      +       E       DI +    YA  + + +Y+      
Sbjct: 69  E---VTVNQYSVFQYPPYDLALASKMAEVAQRENLDI-LHVH-YAIPHAICAYLA----- 118

Query: 186 CYIHYPTITKEMLTRVARRVIT-HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDI 244
                    K+M+    + V T H     V  +            +         + SD+
Sbjct: 119 ---------KQMIGERIKIVTTLHGTDITVLGS------DPSLNNLIRFGI----EQSDV 159

Query: 245 IMVNSSWTEEHVIQLWNCQLKTY--------KLYPPCDTEDLKKITHSKTDGPVKIISVA 296
           +   S        +L                ++Y   D   LKK         + +I ++
Sbjct: 160 VTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKI-LIHIS 218

Query: 297 QFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE 356
            FR  K     ++A  ++   +      + KL+ +G    E        +  L K+L +E
Sbjct: 219 NFRKVKRVQDVVQAFAKIVTEV------DAKLLLVGDG-PEFCT-----ILQLVKNLHIE 266

Query: 357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIV 416
           + V F      +++ +  +   + L     E FG+ ++E MA G+  I  + GG   +++
Sbjct: 267 DRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIP-EVI 323

Query: 417 IEDPETCRNGFLA--CDEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSME 467
                    G+L    D    A     +L   ++    + + A  SV ++F  E
Sbjct: 324 QHG----DTGYLCEVGDTTGVADQAIQLLK-DEELHRNMGERARESVYEQFRSE 372

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 41/256 (16%), Positives = 87/256 (33%), Gaps = 31/256 (12%)

Query: 227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHV-----------IQLWNCQLKTYKLYPPCDT 275
             + +  L   V KY   I     + +  +           I   +   +        + 
Sbjct: 162 NREFWEFLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPSI---DPLSEKNVELKQTEI 218

Query: 276 EDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR 335
             + +      + P+ I  V++F P K     +    ++++ I       ++L+ +G   
Sbjct: 219 LRILERFDVDPEKPI-ITQVSRFDPWKGIFDVIEIYRKVKEKI-----PGVQLLLVGVMA 272

Query: 336 NEEDE---VCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIG 392
           +++ E      K ++ + +   ++      + +   ++        + L     E FG+ 
Sbjct: 273 HDDPEGWIYFEKTLRKIGEDYDVKVLTNL-IGVHAREVNAFQRASDVILQMSIREGFGLT 331

Query: 393 IVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTR 452
           + E M  G  +I    GG K    I D ET   GFL  D  E  + +  +L    +    
Sbjct: 332 VTEAMWKGKPVIGRAVGGIK--FQIVDGET---GFLVRDANEAVEVVLYLLK-HPEVSKE 385

Query: 453 ISQNAVSSV-DRFSME 467
           +   A   V   F + 
Sbjct: 386 MGAKAKERVRKNFIIT 401

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score = 67.9 bits (165), Expect = 2e-12
 Identities = 61/433 (14%), Positives = 110/433 (25%), Gaps = 72/433 (16%)

Query: 44  KKRKSYNVLKTVAFFHPYCNAGG--GGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSE 101
             R S    K +    P  N     GG             K    +I +     +    +
Sbjct: 38  NARTSSIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDATPNPKDLQ 97

Query: 102 IIKRAHQRFNIVLPDQVINFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPD 161
             K           D  +  V    R      +  +                       D
Sbjct: 98  SFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKH-----------------------D 134

Query: 162 IYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILT 221
           I+I T  +   Y     +  S  +     P      + +         +SQ V       
Sbjct: 135 IFIATAWWT-AYAAQRIV--SWQSDTYGIPPNKILYIIQDFEPGFYQWSSQYV------- 184

Query: 222 SFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKI 281
                   +    Y +  +   I + NS   +++           Y   P  +T  LK  
Sbjct: 185 --------LAESTYKY--RGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTT-LKNY 233

Query: 282 THSKTDGPVKIISVAQF-RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDE 340
            + K      I+   +         L + A+    Q       +  K+I +G    +   
Sbjct: 234 INDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDR--SNEWKIISVGEKHKDI-- 289

Query: 341 VCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAG 400
                       L    ++     L  ED         IG+  M + H     +E    G
Sbjct: 290 -----------ALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG 338

Query: 401 LIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQ--DTKTRISQN 456
           L +I +K          +      N       +    A+T+  +       D   + S N
Sbjct: 339 LRVITNKYENK------DLSNWHSNIVSLEQLNPENIAETLVELCMSFNNRDVDKKESSN 392

Query: 457 AVSSVDRFSMEEF 469
            +  ++ F+   F
Sbjct: 393 MMFYINEFNEFSF 405

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score = 64.2 bits (157), Expect = 3e-11
 Identities = 46/244 (18%), Positives = 93/244 (38%), Gaps = 30/244 (12%)

Query: 238 VGKYSDIIMVNSSWTEEHVIQLWNCQ------------LKTYKLYPPCDTEDLKKITHSK 285
           +   +D++ VN+    + ++  ++              ++ Y       TE  ++     
Sbjct: 181 LVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGIP 240

Query: 286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIG--STRNEEDEVCV 343
               V +  V + +P K   + ++A+  L     +    NL++I  G  S  N   +   
Sbjct: 241 LHTKV-VAFVGRLQPFKGPQVLIKAVAALFDRDPD---RNLRVIICGGPSGPNATPDTY- 295

Query: 344 KDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIM 403
              + + + L +E  + F    P  ++   +    I     +NE FG+  +E  A+G  +
Sbjct: 296 ---RHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPV 352

Query: 404 IAHKSGGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSV 461
           IA + GG     V E       G L        +A  +  +L    +T+ R+ ++AV   
Sbjct: 353 IAARVGGLP-IAVAE----GETGLLVDGHSPHAWADALATLLD-DDETRIRMGEDAVEHA 406

Query: 462 DRFS 465
             FS
Sbjct: 407 RTFS 410

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 25/185 (13%)

Query: 287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDM 346
              + ++ V      K     + A+  L     E L  N  L  +G  +  +        
Sbjct: 195 QQNL-LLQVGSDFGRKGVDRSIEALASLP----ESLRHNTLLFVVGQDKPRK-------F 242

Query: 347 QDLCKHLSLENNVEFKVNLPY-EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA 405
           + L + L + +NV F        D+ +  +   + LH  + E  GI ++E + AGL ++ 
Sbjct: 243 EALAEKLGVRSNVHF---FSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLT 299

Query: 406 HKSGGPKMDIVIEDPETCRNGFLAC---DEVEYAQTIKLILHLSQDTKTRISQNAVSSVD 462
               G     + +       G +      + +  + ++  L      +   ++NA    D
Sbjct: 300 TAVCGYA-HYIADA----NCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYAD 353

Query: 463 RFSME 467
              + 
Sbjct: 354 TQDLY 358

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 61.1 bits (148), Expect = 5e-10
 Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 30/214 (14%)

Query: 269 LYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKL 328
           LY   + ++   +       P+ + ++A+    K+    +    +        L +   L
Sbjct: 554 LYSDVENKEHLCV-LKDKKKPI-LFTMARLDRVKNLSGLVEWYGKNT-----RLRELANL 606

Query: 329 IFIG------STRNEEDEVCVKDMQDLCKHLSLENNVEF-KVNLPYEDM----KKEFSEG 377
           + +G      S  NEE    +K M DL +   L     +    +         +      
Sbjct: 607 VVVGGDRRKESKDNEEKAE-MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTK 665

Query: 378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEVEY 435
              +     E FG+ +VE M  GL   A   GGP  +I++      ++GF        + 
Sbjct: 666 GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVH----GKSGFHIDPYHGDQA 720

Query: 436 AQTI-KLILHLSQDTKTR--ISQNAVSSV-DRFS 465
           A T+        +D      IS+  +  + ++++
Sbjct: 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYT 754

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 40/243 (16%)

Query: 221 TSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTED--- 277
                            +G   D++   S +T       +        L    D +    
Sbjct: 120 HEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTP 179

Query: 278 --------LKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI 329
                    +K        PV I   ++  P K     ++AM Q+          + +L+
Sbjct: 180 ATPEDKSATRKKLGFTDTTPV-IACNSRLVPRKGQDSLIKAMPQVIAAR-----PDAQLL 233

Query: 330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG-------LIGLH 382
            +GS R E        ++ L     +  NV+F   L Y+DM    +              
Sbjct: 234 IVGSGRYEST------LRRLAT--DVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGG 285

Query: 383 AMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIK 440
            +  E  GI  +E  A G+ +IA  SGG   + V         G +    D  + ++ + 
Sbjct: 286 GLDVEGLGIVYLEAQACGVPVIAGTSGGAP-ETVTP-----ATGLVVEGSDVDKLSELLI 339

Query: 441 LIL 443
            +L
Sbjct: 340 ELL 342

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 38/213 (17%), Positives = 81/213 (38%), Gaps = 31/213 (14%)

Query: 271 PPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF 330
                   + +   + + P  II+ ++   +K+H   + A  Q +     EL D   L+ 
Sbjct: 245 AKITKYLERDLGSERMELPA-IIASSRLDQKKNHYGLVEAYVQNK-----ELQDKANLVL 298

Query: 331 IG-----------STRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLI 379
                            EE E+ +  + +L  +      V        +++   ++    
Sbjct: 299 TLRGIENPFEDYSRAGQEEKEI-LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLAS 357

Query: 380 --GLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEV 433
              + A+  + E FG+  VE MA+GL  +  ++GGP  +I+       + G L    D  
Sbjct: 358 KGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPA-EILDG----GKYGVLVDPEDPE 412

Query: 434 EYAQTIKLILHLSQDTKTRISQNAVSSV-DRFS 465
           + A+ +      S++T +   +     V +R++
Sbjct: 413 DIARGLLKAFE-SEETWSAYQEKGKQRVEERYT 444

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 54.0 bits (129), Expect = 4e-08
 Identities = 29/273 (10%), Positives = 73/273 (26%), Gaps = 24/273 (8%)

Query: 216 NNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDT 275
              +L    +       L +         +M  S      +     C++    +    DT
Sbjct: 108 TKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYG-CKVPINIVSHFVDT 166

Query: 276 EDL----KKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLI-- 329
           + +    K +  S+ +  V  +++ +    K   + + A  +      +     L     
Sbjct: 167 KTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHH 226

Query: 330 FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF 389
                 +      +           L   +  +  L  E +   ++   + ++    E F
Sbjct: 227 ESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGF 286

Query: 390 GIGIVECMAAGLIMIAHKSGG--------------PKMDIVIEDPETCRNGFLACDEVEY 435
           G+   E    G  +I    GG              P   I ++D +         D  + 
Sbjct: 287 GLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDL 346

Query: 436 AQTIKLILHLSQDTKTRISQNAVSSV-DRFSME 467
            +         +  +    +     V  + + +
Sbjct: 347 VEAFTFFKD--EKNRKEYGKRVQDFVKTKPTWD 377

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 5e-07
 Identities = 45/365 (12%), Positives = 114/365 (31%), Gaps = 112/365 (30%)

Query: 203 RRVITHNNSQRVAN--NPILTSFKLFY---------YKVFALLYSHVGKYSDIIMVNSSW 251
           + +++      +    + +  + +LF+          + F      V    +++ +N  +
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKF------VE---EVLRINYKF 93

Query: 252 TEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIIS---VAQFRPEKDHPLQL 308
                  L +  +KT +  P   T    +    +     ++ +   V+  R +    L+ 
Sbjct: 94  -------LMS-PIKTEQRQPSMMTRMYIE-QRDRLYNDNQVFAKYNVS--RLQPYLKLR- 141

Query: 309 RAMYQLR---------------QIISEELWDNLKL-------IF-IGSTRNEEDEVCVKD 345
           +A+ +LR                 ++ ++  + K+       IF +        E  ++ 
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201

Query: 346 MQDLCKHL--SLENNVEFKVNLPY--EDMK---------KEFSEGLIGLHAMWN----EH 388
           +Q L   +  +  +  +   N+      ++         K +   L+ L  + N      
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 389 FGIG-----------IVECMAAGL---IMIAHKSGG-----------PKMDIVIED--PE 421
           F +            + + ++A     I + H S               +D   +D   E
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 422 TCRNGFLACDEV-----EYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTF 476
                      +     +   T     H++ D  T I +   SS++     E++  F   
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE---SSLNVLEPAEYRKMFDRL 378

Query: 477 TQPLF 481
           +  +F
Sbjct: 379 S--VF 381

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 1e-05
 Identities = 55/394 (13%), Positives = 110/394 (27%), Gaps = 124/394 (31%)

Query: 39  KYYVSKKRKSYNVLKTVAF---FHPY---CNAGGGGERVLWTAVLALH--QKYPDYKIY- 89
           KY VS+ +  Y  L+                  G G+  +   V   +  Q   D+KI+ 
Sbjct: 128 KYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186

Query: 90  IYTGDVDASPSEIIK---------------RAHQRFNIVLPDQVINFVYLYRRKFVEASL 134
           +   + + SP  +++               R+    NI L    I+ +    R+ +++  
Sbjct: 187 LNLKNCN-SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR---IHSIQAELRRLLKSKP 242

Query: 135 YP----------------YFTLLGQSIGSMIL------GVEALLSFQP--DIYIDTMGYA 170
           Y                  F     ++   IL       V   LS      I +D     
Sbjct: 243 YENCLLVLLNVQNAKAWNAF-----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 171 FTYP----LFS-YIGGS-----KVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPIL 220
            T      L   Y+        +     + P     +   +   + T +N + V  + + 
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTN-PRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 221 TSFKLF-----------YYKVFALLYSHV-------------GKYSDIIMV-----NSS- 250
           T  +              +   ++                     SD+++V       S 
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 251 ---WTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIIS----VAQFRPEKD 303
                +E  I + +  L+          E+   + H        I+        F  +  
Sbjct: 417 VEKQPKESTISIPSIYLELK-----VKLENEYAL-HRS------IVDHYNIPKTFDSDDL 464

Query: 304 HPLQLRA------MYQLRQIISEELWDNLKLIFI 331
            P  L         + L+ I   E     +++F+
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 41/193 (21%)

Query: 287 DGPVKIISVAQF-RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKD 345
           +G   ++ + ++  P K   + L A+ +L        + +++++ +G  R +EDE+    
Sbjct: 207 EGRT-VLFLGRYDEPRKGMAVLLAALPKLV-----ARFPDVEILIVG--RGDEDEL---- 254

Query: 346 MQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM---------WNEHFGIGIVEC 396
                +   L  ++ F   +                              E FGI +VE 
Sbjct: 255 ---REQAGDLAGHLRFLGQVDDAT--------KASAMRSADVYCAPHLGGESFGIVLVEA 303

Query: 397 MAAGLIMIAHKSGGPKMDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRIS 454
           MAAG  ++A      +  ++ +       G L    D    A  +  IL      +    
Sbjct: 304 MAAGTAVVASDLDAFR-RVLADG----DAGRLVPVDDADGMAAALIGILE-DDQLRAGYV 357

Query: 455 QNAVSSVDRFSME 467
             A   V R+   
Sbjct: 358 ARASERVHRYDWS 370

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	488
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	99.97
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	99.97
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	99.97
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.97
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	99.97
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.96
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.96
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.95
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.94
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.94
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.94
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.93
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.91
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.88
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.88
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.88
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.88
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.85
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.8
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.77
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.76
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.76
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.72
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.72
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.71
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.66
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.65
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.56
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.53
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.46
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.28
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.28
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.27
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.17
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.14
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.02
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	98.92
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.75
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.65
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.62
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	98.56
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.52
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	98.3
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	98.25
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.24
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.18
3tov_A	349	Glycosyl transferase family 9; structural genomics	98.11
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	97.69
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	96.71
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	96.28
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	93.3
1jg7_A	351	BGT, DNA beta-glucosyltransferase; glycosyltransfe	91.3
1k68_A	140	Phytochrome response regulator RCPA; phosphorylate	84.02
4g65_A	461	TRK system potassium uptake protein TRKA; structur	82.05
3heb_A	152	Response regulator receiver domain protein (CHEY);	80.45
3ilh_A	146	Two component response regulator; NYSGXRC, PSI-II,	80.3
3jte_A	143	Response regulator receiver protein; structural ge	80.26

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=4.9e-40  Score=326.42  Aligned_cols=390  Identities=15%  Similarity=0.149  Sum_probs=275.0

Q ss_pred             cccccEEEEeccCCCC--------CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeE
Q psy15555         49 YNVLKTVAFFHPYCNA--------GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVIN  120 (488)
Q Consensus        49 ~~~~~rI~~~~~~~~~--------~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  120 (488)
                      ...+|||++++....+        .||.++++..++++|.++|  ++|.+++...+....        . ....... +.
T Consensus        17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~--------~-~~~~~~~-v~   84 (438)
T 3c48_A           17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQG--------E-IVRVAEN-LR   84 (438)
T ss_dssp             --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGGC--------S-EEEEETT-EE
T ss_pred             CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCCCCc--------c-cccccCC-eE
Confidence            3456999999865543        4788999999999999985  455555443221100        0 0011133 66


Q ss_pred             EEEeeccceeeccCchhHHHHHHHHHHHHHHHHH-hhhc-CCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHH
Q psy15555        121 FVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEA-LLSF-QPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEM  197 (488)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~-~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~  197 (488)
                      +..++...............+..   ......+. +++. +||+||.+......+. .+....++|++.+.|......  
T Consensus        85 v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--  159 (438)
T 3c48_A           85 VINIAAGPYEGLSKEELPTQLAA---FTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--  159 (438)
T ss_dssp             EEEECCSCSSSCCGGGGGGGHHH---HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH--
T ss_pred             EEEecCCCccccchhHHHHHHHH---HHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc--
Confidence            66655432211000011111111   11112233 4443 4999987753222222 223345899999998653100  


Q ss_pred             HHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCch
Q psy15555        198 LTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTE  276 (488)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~  276 (488)
                                         +................+++.+++.+|.++++|+..++.+.+.++.+ .++.+++|++|.+
T Consensus       160 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~  220 (438)
T 3c48_A          160 -------------------NSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE  220 (438)
T ss_dssp             -------------------SCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred             -------------------cccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence                               00000000000112233556778899999999999999998866643 5899999999987


Q ss_pred             hhhccCCC----------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccC--ceEEEEEecCCCCCcHHHHH
Q psy15555        277 DLKKITHS----------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWD--NLKLIFIGSTRNEEDEVCVK  344 (488)
Q Consensus       277 ~~~~~~~~----------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~--~~~l~ivG~~~~~~~~~~~~  344 (488)
                      .+.+....          ...++++++++|++.+.||++.+++|++.+.++.     |  +++|+|+|.....  ....+
T Consensus       221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~-----p~~~~~l~i~G~~~~~--g~~~~  293 (438)
T 3c48_A          221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRD-----PDRNLRVIICGGPSGP--NATPD  293 (438)
T ss_dssp             TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHC-----TTCSEEEEEECCBC--------C
T ss_pred             ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhC-----CCcceEEEEEeCCCCC--CcHHH
Confidence            76553221          1346789999999999999999999999998876     5  7999999982100  02337


Q ss_pred             HHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccc
Q psy15555        345 DMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCR  424 (488)
Q Consensus       345 ~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~  424 (488)
                      +++++++++++.++|.++|+++.+|+.++|+.||++|.||..|++|++++|||++|+|||+++.++.. |++.++    .
T Consensus       294 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~----~  368 (438)
T 3c48_A          294 TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLP-IAVAEG----E  368 (438)
T ss_dssp             HHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBT----T
T ss_pred             HHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChh-HHhhCC----C
Confidence            88999999999999999999999999999999999999999999999999999999999999999886 899887    8


Q ss_pred             cceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhccC
Q psy15555        425 NGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKS  487 (488)
Q Consensus       425 ~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~~s  487 (488)
                      +|++++  |+++++++|.++++ |++.++++++++++.+++|||+.+++++.++|+++++..+.|
T Consensus       369 ~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  432 (438)
T 3c48_A          369 TGLLVDGHSPHAWADALATLLD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVD  432 (438)
T ss_dssp             TEEEESSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             cEEECCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccC
Confidence            899987  89999999999999 999999999999999955999999999999999999876543

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=5e-40  Score=331.67  Aligned_cols=395  Identities=17%  Similarity=0.180  Sum_probs=280.2

Q ss_pred             ccEEEEeccCCC------------CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCCh-hHHHHHhhhhccccc--CC
Q psy15555         52 LKTVAFFHPYCN------------AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASP-SEIIKRAHQRFNIVL--PD  116 (488)
Q Consensus        52 ~~rI~~~~~~~~------------~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~  116 (488)
                      +|||+++++...            ..||.++++..++++|.++|++  |.+++....... .    .....+ ..+  ..
T Consensus         7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~--V~v~~~~~~~~~~~----~~~~~~-~~~~~~~   79 (499)
T 2r60_A            7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQ--VDIITRRIKDENWP----EFSGEI-DYYQETN   79 (499)
T ss_dssp             CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCE--EEEEEECCCBTTBG----GGCCSE-EECTTCS
T ss_pred             cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCe--EEEEeCCCCccccc----chhhhH-HhccCCC
Confidence            599999987542            2578899999999999999544  444443322111 0    000000 011  13


Q ss_pred             CeeEEEEeecccee---eccCchhHHHHHHHHHHHHHHHHHhhh--cCCcEEEecCCccchhh-hhhhhCCCeeEEEEeC
Q psy15555        117 QVINFVYLYRRKFV---EASLYPYFTLLGQSIGSMILGVEALLS--FQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHY  190 (488)
Q Consensus       117 ~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~  190 (488)
                      + +.+..++.....   ....+..+.      .....+.+.+++  .+||+||.+...+..+. .+....++|++.+.|.
T Consensus        80 g-v~v~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~  152 (499)
T 2r60_A           80 K-VRIVRIPFGGDKFLPKEELWPYLH------EYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS  152 (499)
T ss_dssp             S-EEEEEECCSCSSCCCGGGCGGGHH------HHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSS
T ss_pred             C-eEEEEecCCCcCCcCHHHHHHHHH------HHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccC
Confidence            3 666666543211   011111111      111334556666  58999998764333222 2233568999999996


Q ss_pred             CccchHHHHHHHhhhhcccCccccccCccc-hhhhHHH-HHHHHHHHHHHhcccCEEEEcChhHHHHHHHH--hc-----
Q psy15555        191 PTITKEMLTRVARRVITHNNSQRVANNPIL-TSFKLFY-YKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL--WN-----  261 (488)
Q Consensus       191 p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~-----  261 (488)
                      .....      ...   ..      ..... ......+ ......+++.+++.+|.++++|+.+++.+.+.  ++     
T Consensus       153 ~~~~~------~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~  217 (499)
T 2r60_A          153 LGAQK------MEK---LN------VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNV  217 (499)
T ss_dssp             CHHHH------HHT---TC------CCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCT
T ss_pred             ccccc------chh---hc------cCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccc
Confidence            53100      000   00      00000 0111111 11222355678899999999999999999886  55     


Q ss_pred             -cCCceEEEcCCCCchhhhccCCC----------------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccC
Q psy15555        262 -CQLKTYKLYPPCDTEDLKKITHS----------------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWD  324 (488)
Q Consensus       262 -~~~k~~vi~~~~d~~~~~~~~~~----------------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~  324 (488)
                       .+.++.+++|++|.+.+.+....                ...++++++++|++.+.||++.+++|++.+.++.+    .
T Consensus       218 ~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~----~  293 (499)
T 2r60_A          218 EDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD----K  293 (499)
T ss_dssp             TCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH----H
T ss_pred             cCCCCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC----C
Confidence             45689999999998877554220                23467899999999999999999999999987751    2


Q ss_pred             ceEEEEEecCCCC---------CcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC----cEEEEcCCCCcCCc
Q psy15555        325 NLKLIFIGSTRNE---------EDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG----LIGLHAMWNEHFGI  391 (488)
Q Consensus       325 ~~~l~ivG~~~~~---------~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a----d~~v~~s~~e~~g~  391 (488)
                      ..+++|+|..+..         .+.+|.++++++++++++.++|+|+|+++.+++..+|+.|    |++|+||..|++|+
T Consensus       294 ~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~  373 (499)
T 2r60_A          294 ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGL  373 (499)
T ss_dssp             CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCS
T ss_pred             ceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCc
Confidence            3589999983211         0123368999999999999999999999999999999999    99999999999999


Q ss_pred             cHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHH
Q psy15555        392 GIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEE  468 (488)
Q Consensus       392 ~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~  468 (488)
                      +++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++|.++++ |++.++++++++++.+ ++|||+.
T Consensus       374 ~~lEAma~G~PvI~s~~~g~~-e~v~~~----~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~  447 (499)
T 2r60_A          374 APVEAMASGLPAVVTRNGGPA-EILDGG----KYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQE  447 (499)
T ss_dssp             HHHHHHHTTCCEEEESSBHHH-HHTGGG----TSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHH
T ss_pred             HHHHHHHcCCCEEEecCCCHH-HHhcCC----ceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHH
Confidence            999999999999999998886 999887    8899986  99999999999999 9999999999999999 6699999


Q ss_pred             HHHHHHHHHHHhhhhhc
Q psy15555        469 FKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       469 ~~~~~~~~~~~~~~~~~  485 (488)
                      +++++.++|++++..+.
T Consensus       448 ~~~~~~~~y~~~~~~~~  464 (499)
T 2r60_A          448 TARGYLEVIQEIADRKD  464 (499)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhhhh
Confidence            99999999999987554

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=1.6e-39  Score=318.18  Aligned_cols=358  Identities=16%  Similarity=0.155  Sum_probs=270.4

Q ss_pred             cccEEEEeccCCC-CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccce
Q psy15555         51 VLKTVAFFHPYCN-AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKF  129 (488)
Q Consensus        51 ~~~rI~~~~~~~~-~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  129 (488)
                      .+|||+++++... ..||.++++..++++|  +  +++|.+++...........+   .      ..+ +.+..++....
T Consensus         3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~--g~~v~v~~~~~~~~~~~~~~---~------~~~-~~~~~~~~~~~   68 (394)
T 3okp_A            3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--D--PESIVVFASTQNAEEAHAYD---K------TLD-YEVIRWPRSVM   68 (394)
T ss_dssp             -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--C--GGGEEEEEECSSHHHHHHHH---T------TCS-SEEEEESSSSC
T ss_pred             CCceEEEEeCccCCccchHHHHHHHHHHHh--c--CCeEEEEECCCCccchhhhc---c------ccc-eEEEEcccccc
Confidence            4689999987554 4678889999999999  3  34555555543221101111   1      122 55555554322


Q ss_pred             eeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCe-eEEEEeCCccchHHHHHHHhhhh
Q psy15555        130 VEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSK-VACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~-~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                      ..     .       ......+.+++++.+||+||.+...+..+.  .++ ..++| ++...|.....+           
T Consensus        69 ~~-----~-------~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~-~~~~~~~i~~~h~~~~~~-----------  124 (394)
T 3okp_A           69 LP-----T-------PTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAK-QAGASKVIASTHGHEVGW-----------  124 (394)
T ss_dssp             CS-----C-------HHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHH-HTTCSEEEEECCSTHHHH-----------
T ss_pred             cc-----c-------hhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHH-hcCCCcEEEEeccchhhh-----------
Confidence            11     1       112244667888999999997654443222  223 44665 777888542100           


Q ss_pred             cccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC---
Q psy15555        207 THNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH---  283 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~---  283 (488)
                                         ........+.+.+++.+|.++++|+.+++.+.+.++.+.++.+++|++|.+.+.+...   
T Consensus       125 -------------------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~  185 (394)
T 3okp_A          125 -------------------SMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDK  185 (394)
T ss_dssp             -------------------TTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHH
T ss_pred             -------------------hhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhh
Confidence                               0111223345567788999999999999999998877779999999999877655210   


Q ss_pred             -------CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        284 -------SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       284 -------~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                             ...+++++++++|++.+.||++.+++|++.+.++.     ++++|+|+|+++..      +++++++  .++.
T Consensus       186 ~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~-----~~~~l~i~G~g~~~------~~l~~~~--~~~~  252 (394)
T 3okp_A          186 SATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAAR-----PDAQLLIVGSGRYE------STLRRLA--TDVS  252 (394)
T ss_dssp             HHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHS-----TTCEEEEECCCTTH------HHHHHHT--GGGG
T ss_pred             HHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhC-----CCeEEEEEcCchHH------HHHHHHH--hccc
Confidence                   12345689999999999999999999999999887     89999999998643      6677776  5556


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCC-------CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWN-------EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA  429 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~-------e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~  429 (488)
                      ++|+++|+++++++.++|+.||++|.||..       |++|++++|||++|+|||+++.++.. |++.++     +|+++
T Consensus       253 ~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-----~g~~~  326 (394)
T 3okp_A          253 QNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP-ETVTPA-----TGLVV  326 (394)
T ss_dssp             GGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG-GGCCTT-----TEEEC
T ss_pred             CeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH-HHHhcC-----CceEe
Confidence            899999999999999999999999999998       99999999999999999999999886 888764     78988


Q ss_pred             C--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        430 C--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       430 ~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                      +  |+++++++|.++++ |++.++++++++++.+ ++|||+.+++++.++|+++.....
T Consensus       327 ~~~d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~  384 (394)
T 3okp_A          327 EGSDVDKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLA  384 (394)
T ss_dssp             CTTCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred             CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcc
Confidence            7  99999999999999 9999999999999999 779999999999999999876544

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=9.8e-39  Score=317.07  Aligned_cols=400  Identities=16%  Similarity=0.087  Sum_probs=276.8

Q ss_pred             cccEEEEeccCCCC--CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHh-----hhh--cccccCCCeeEE
Q psy15555         51 VLKTVAFFHPYCNA--GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRA-----HQR--FNIVLPDQVINF  121 (488)
Q Consensus        51 ~~~rI~~~~~~~~~--~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~v~~  121 (488)
                      ++|||+++++...+  .||.++++..++++|.++||  +|.+++...+..........     ...  .......+ +.+
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~--~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-v~v   77 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGH--EVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGN-LRI   77 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTC--EEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETT-EEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhccccccCcccceeeeeccCCC-ceE
Confidence            46999999876554  68899999999999999954  45554443222110000000     000  00001133 667


Q ss_pred             EEeeccceeeccCch-hHHH-HHHHHHHHHHHHHHhh-----hcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCcc
Q psy15555        122 VYLYRRKFVEASLYP-YFTL-LGQSIGSMILGVEALL-----SFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTI  193 (488)
Q Consensus       122 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~-----~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~  193 (488)
                      ..++...+.....+. .... ..+.........+.++     ..+||+||.+.......+ .++...++|++.++|....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~  157 (439)
T 3fro_A           78 YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK  157 (439)
T ss_dssp             EEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred             EEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence            666652222222222 1111 1111112222333333     559999998764443333 2333568999999997653


Q ss_pred             chHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-cCCceEEEcCC
Q psy15555        194 TKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-CQLKTYKLYPP  272 (488)
Q Consensus       194 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~k~~vi~~~  272 (488)
                      ..-.......             .. ....   .......+++..++.+|.++++|+..++.....++ .+.++.+++|+
T Consensus       158 ~~~~~~~~~~-------------~~-~~~~---~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng  220 (439)
T 3fro_A          158 SKLPAFYFHE-------------AG-LSEL---APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG  220 (439)
T ss_dssp             CCEEHHHHHH-------------TT-CGGG---CCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred             ccCchHHhCc-------------cc-cccc---cccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence            1100000000             00 0000   00000024456778899999999999888555433 34589999999


Q ss_pred             CCchhhhccCC---------------CCCCCCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCC
Q psy15555        273 CDTEDLKKITH---------------SKTDGPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRN  336 (488)
Q Consensus       273 ~d~~~~~~~~~---------------~~~~~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~  336 (488)
                      +|.+.+.+...               ...++ ++++++|++. +.||++.+++|++.+.++..   .++++|+|+|.++ 
T Consensus       221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~---~~~~~l~i~G~g~-  295 (439)
T 3fro_A          221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE---FQEMRFIIIGKGD-  295 (439)
T ss_dssp             CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG---GGGEEEEEECCCC-
T ss_pred             CCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc---CCCeEEEEEcCCC-
Confidence            99887765421               01334 9999999999 99999999999999987530   0489999999986 


Q ss_pred             CCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcccee
Q psy15555        337 EEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIV  416 (488)
Q Consensus       337 ~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv  416 (488)
                         .++.+++++++++++  +.+.+.|+++.+++.++|+.||++|.||..|++|++++|||++|+|||+++.++.. |++
T Consensus       296 ---~~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~  369 (439)
T 3fro_A          296 ---PELEGWARSLEEKHG--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR-DII  369 (439)
T ss_dssp             ---HHHHHHHHHHHHHCT--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHH-HHC
T ss_pred             ---hhHHHHHHHHHhhcC--CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcc-eeE
Confidence               245588899999887  67889999999999999999999999999999999999999999999999999886 888


Q ss_pred             ccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhcc
Q psy15555        417 IEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKK  486 (488)
Q Consensus       417 ~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  486 (488)
                      .++     +|++++  |+++++++|.++++++++.++++++++++.+++|||+.+++++.++|++++++..+
T Consensus       370 ~~~-----~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  436 (439)
T 3fro_A          370 TNE-----TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRAFD  436 (439)
T ss_dssp             CTT-----TCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCCBCS
T ss_pred             EcC-----ceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhhhh
Confidence            654     788876  99999999999998678999999999999998899999999999999999876543

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=3.9e-39  Score=317.44  Aligned_cols=355  Identities=12%  Similarity=0.105  Sum_probs=266.7

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeec---cce
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYR---RKF  129 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~  129 (488)
                      |||+++++..+..||.++++..++++|.++ +++.++.+........                .. ........   ...
T Consensus         1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~~----------------~~-~~~~~~~~~~~~~~   62 (413)
T 3oy2_A            1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSVH----------------AN-IEEFDAQTAEHVRG   62 (413)
T ss_dssp             CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCSC----------------SS-SEEEEHHHHHHHTT
T ss_pred             CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcccc----------------cc-cccCCccccccccc
Confidence            899999988888888999999999999998 7777765544311100                00 00000000   000


Q ss_pred             eeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCC----eeEEEEeCCccchHHHHHHHhhh
Q psy15555        130 VEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGS----KVACYIHYPTITKEMLTRVARRV  205 (488)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~----~~v~~~h~p~~~~d~~~~~~~~~  205 (488)
                      .....+.           ...+.+.+++.+||+||.+...+.....+....+.    +++...|.....           
T Consensus        63 ~~~~~~~-----------~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  120 (413)
T 3oy2_A           63 LNEQGFY-----------YSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKN-----------  120 (413)
T ss_dssp             CCSTTCC-----------HHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBS-----------
T ss_pred             cccccch-----------HHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchh-----------
Confidence            0000000           02245567888999998774333333333323333    344445432210           


Q ss_pred             hcccCccccccCccchhhhHHHHHHHHHHHHHHhcccC--EEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC
Q psy15555        206 ITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSD--IIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH  283 (488)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~  283 (488)
                                    ...  .         .+.+++++|  .++++|+..++.+.+ ++.+.++.+++||+|.+.+.....
T Consensus       121 --------------~~~--~---------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~~~~~  174 (413)
T 3oy2_A          121 --------------IRE--N---------LWWIFSHPKVVGVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTIYDARK  174 (413)
T ss_dssp             --------------CCG--G---------GGGGGGCTTEEEEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCCTTHHH
T ss_pred             --------------hHH--H---------HHHHHhccCCceEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHHHHHHH
Confidence                          000  0         245678878  999999999999999 554678999999999876632221


Q ss_pred             --CCCC--CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCc-
Q psy15555        284 --SKTD--GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENN-  358 (488)
Q Consensus       284 --~~~~--~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~-  358 (488)
                        ..++  ++++++++|++.+.||++.+++|++.+.++.     |+++|+|+|+++.....+..+.++++++++|+.++ 
T Consensus       175 ~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~-----~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v  249 (413)
T 3oy2_A          175 LVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKY-----PDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVF  249 (413)
T ss_dssp             HTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHC-----TTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHH
T ss_pred             hcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhC-----CCcEEEEEeCCcccchhhHHHHHHHHHHHcCccccc
Confidence              1223  6789999999999999999999999998887     89999999999765443455888999999999886 


Q ss_pred             ------EEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCcccc-------
Q psy15555        359 ------VEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRN-------  425 (488)
Q Consensus       359 ------v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~-------  425 (488)
                            +.+.|+++.+|+.++|+.||++|+||..|+||++++|||++|+|||+++.++.. |++.++    .+       
T Consensus       250 ~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~----~~~~i~~~~  324 (413)
T 3oy2_A          250 THLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGD----CVYKIKPSA  324 (413)
T ss_dssp             HHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTT----TSEEECCCE
T ss_pred             ccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChH-HHHccC----ccccccccc
Confidence                  888899999999999999999999999999999999999999999999999886 888876    55       


Q ss_pred             --------ce--ecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        426 --------GF--LAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       426 --------g~--~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                              |+  +++  |+++++++| ++++ |++.++++++++++.+ ++|||+.+++++.++|+++++++.
T Consensus       325 ~~~~~~~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  395 (413)
T 3oy2_A          325 WISVDDRDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES  395 (413)
T ss_dssp             EEECTTTCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred             ccccccccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence                    77  765  999999999 9999 9999999999999999 899999999999999999987553

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=4.7e-39  Score=314.79  Aligned_cols=364  Identities=17%  Similarity=0.164  Sum_probs=265.3

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      .|+.-+.....+..||+++++..++++|.++  |++|.+++........            ..... +.+..++......
T Consensus        13 ~~~~~~~~~~~p~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~------------~~~~~-i~~~~~~~~~~~~   77 (394)
T 2jjm_A           13 HMKLKIGITCYPSVGGSGVVGTELGKQLAER--GHEIHFITSGLPFRLN------------KVYPN-IYFHEVTVNQYSV   77 (394)
T ss_dssp             --CCEEEEECCC--CHHHHHHHHHHHHHHHT--TCEEEEECSSCC----------------CCCTT-EEEECCCCC----
T ss_pred             hheeeeehhcCCCCCCHHHHHHHHHHHHHhC--CCEEEEEeCCCCCccc------------ccCCc-eEEEecccccccc
Confidence            3555455555566788999999999999998  5666666654221100            00112 3333332211100


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhC--CCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIG--GSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~--~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                       ....     ...+.....+.+.+++.+||+||.+...+..+.  +++...  ++|++.+.|....      ..      
T Consensus        78 -~~~~-----~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~------~~------  139 (394)
T 2jjm_A           78 -FQYP-----PYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI------TV------  139 (394)
T ss_dssp             -CCSC-----CHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH------HT------
T ss_pred             -cccc-----cccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc------cc------
Confidence             0000     011222344667788899999998765544322  222222  5899998884210      00      


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----  283 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----  283 (488)
                      ..      ..   .        .+..+++.+++.+|.++++|+.+++.+.+.++.+.++.+++|++|.+.+.+...    
T Consensus       140 ~~------~~---~--------~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~  202 (394)
T 2jjm_A          140 LG------SD---P--------SLNNLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLK  202 (394)
T ss_dssp             TT------TC---T--------TTHHHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHH
T ss_pred             cC------CC---H--------HHHHHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHH
Confidence            00      00   0        011234456788999999999999999998776678999999999877654321    


Q ss_pred             ---CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        284 ---SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       284 ---~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                         ..+.++++++++|++.+.||++.+++|++.+.++      ++++|+|+|.++..      ++++++++++++.++|.
T Consensus       203 ~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~------~~~~l~i~G~g~~~------~~l~~~~~~~~l~~~v~  270 (394)
T 2jjm_A          203 KEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTE------VDAKLLLVGDGPEF------CTILQLVKNLHIEDRVL  270 (394)
T ss_dssp             HHTTCC---CEEEEECCCCGGGTHHHHHHHHHHHHHS------SCCEEEEECCCTTH------HHHHHHHHTTTCGGGBC
T ss_pred             HHcCCCCCCeEEEEeeccccccCHHHHHHHHHHHHhh------CCCEEEEECCchHH------HHHHHHHHHcCCCCeEE
Confidence               1124678999999999999999999999999876      47899999998643      78999999999989999


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQT  438 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~  438 (488)
                      +.|+.  +|+..+|+.||+++.||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++
T Consensus       271 ~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~----~~g~~~~~~d~~~la~~  343 (394)
T 2jjm_A          271 FLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIP-EVIQHG----DTGYLCEVGDTTGVADQ  343 (394)
T ss_dssp             CCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTST-TTCCBT----TTEEEECTTCHHHHHHH
T ss_pred             EeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChH-HHhhcC----CceEEeCCCCHHHHHHH
Confidence            99975  899999999999999999999999999999999999999999886 999887    8899987  99999999


Q ss_pred             HHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        439 IKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       439 i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                      |.++++ |++.++++++++++.+ ++|||+.+++++.++|++++...+
T Consensus       344 i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  390 (394)
T 2jjm_A          344 AIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLRDDK  390 (394)
T ss_dssp             HHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence            999999 9999999999999999 999999999999999999987654

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=3.6e-38  Score=309.81  Aligned_cols=364  Identities=12%  Similarity=0.100  Sum_probs=267.8

Q ss_pred             cccccEEEEeccCCCC-CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecc
Q psy15555         49 YNVLKTVAFFHPYCNA-GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR  127 (488)
Q Consensus        49 ~~~~~rI~~~~~~~~~-~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  127 (488)
                      ...+|||+++.+.... .||.++.+..++++|.++  |++|.+++........      . .+. .  .. ..+..++..
T Consensus        17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~------~-~~~-~--~~-~~~~~~~~~   83 (406)
T 2gek_A           17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKL------P-DYV-V--SG-GKAVPIPYN   83 (406)
T ss_dssp             ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCC------C-TTE-E--EC-CCCC-----
T ss_pred             CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCccccC------C-ccc-c--cC-CcEEecccc
Confidence            3457999999977654 477889999999999998  5666666655332100      0 000 0  00 001111111


Q ss_pred             ceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhh
Q psy15555        128 KFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVI  206 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~  206 (488)
                      .......+.        ......+.+.+++.+||+||.+......+. .+....++|++.++|......           
T Consensus        84 ~~~~~~~~~--------~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-----------  144 (406)
T 2gek_A           84 GSVARLRFG--------PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-----------  144 (406)
T ss_dssp             -------CC--------HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-----------
T ss_pred             CCccccccc--------HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-----------
Confidence            110000000        111234566778889999986654443322 222245889999999653110           


Q ss_pred             cccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCC--
Q psy15555        207 THNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHS--  284 (488)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~--  284 (488)
                                     ..   . ..+....+..++.+|.+++.|+..++.+.+.++. .++ +++|++|.+.+.+....  
T Consensus       145 ---------------~~---~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-~~~-vi~~~v~~~~~~~~~~~~~  203 (406)
T 2gek_A          145 ---------------LT---L-SVFQGILRPYHEKIIGRIAVSDLARRWQMEALGS-DAV-EIPNGVDVASFADAPLLDG  203 (406)
T ss_dssp             ---------------HH---H-HHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSS-CEE-ECCCCBCHHHHHTCCCCTT
T ss_pred             ---------------hh---H-HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCC-CcE-EecCCCChhhcCCCchhhh
Confidence                           00   0 1111122257789999999999999999886664 478 99999998877655422  


Q ss_pred             CCCCCeEEEEeecc-CCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        285 KTDGPVKIISVAQF-RPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       285 ~~~~~~~i~~~g~~-~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                      ...++++++++|++ .+.||++.+++|+..+.++.     |+++|+|+|.++     +  ++++++++++  .++|.++|
T Consensus       204 ~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~-----~~~~l~i~G~~~-----~--~~l~~~~~~~--~~~v~~~g  269 (406)
T 2gek_A          204 YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARF-----PDVEILIVGRGD-----E--DELREQAGDL--AGHLRFLG  269 (406)
T ss_dssp             CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTS-----TTCEEEEESCSC-----H--HHHHHHTGGG--GGGEEECC
T ss_pred             ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHC-----CCeEEEEEcCCc-----H--HHHHHHHHhc--cCcEEEEe
Confidence            22345799999999 99999999999999998887     899999999985     3  6777777766  57899999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCC-CCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMW-NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIK  440 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~-~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~  440 (488)
                      +++++|+.++|+.||++|.||. .|++|++++|||++|+|||+++.++.. |++.++    .+|++++  |+++++++|.
T Consensus       270 ~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~----~~g~~~~~~d~~~l~~~i~  344 (406)
T 2gek_A          270 QVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFR-RVLADG----DAGRLVPVDDADGMAAALI  344 (406)
T ss_dssp             SCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHH-HHHTTT----TSSEECCTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHH-HHhcCC----CceEEeCCCCHHHHHHHHH
Confidence            9999999999999999999995 999999999999999999999998886 999887    8899984  9999999999


Q ss_pred             HHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        441 LILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                      ++++ +++.+.++++++++.+++|||+.+++++.++|+++++...
T Consensus       345 ~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  388 (406)
T 2gek_A          345 GILE-DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI  388 (406)
T ss_dssp             HHHH-CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred             HHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence            9999 9999999999999999999999999999999999987653

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=9.4e-38  Score=307.80  Aligned_cols=360  Identities=14%  Similarity=0.137  Sum_probs=258.3

Q ss_pred             cccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee
Q psy15555         51 VLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        51 ~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      ++|||+++.+.. ..||.++++..++++|.++|  ++|.+++...........+.....+     .. .....++     
T Consensus        39 ~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G--~~v~v~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~-----  104 (416)
T 2x6q_A           39 KGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG--IEARWFVIEGPTEFFNVTKTFHNAL-----QG-NESLKLT-----  104 (416)
T ss_dssp             TTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT--CEEEEEECCCCHHHHHHHHHHHHHH-----TT-CCSCCCC-----
T ss_pred             hccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC--CeEEEEEccCCcchhhhhcccceee-----cc-ccccccc-----
Confidence            469999998774 46789999999999999985  5554444432211111111111111     00 0000000     


Q ss_pred             eccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                          .....   ..........+.++..+||+||.+...+..+..+. ...+|++.++|......               
T Consensus       105 ----~~~~~---~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~---------------  161 (416)
T 2x6q_A          105 ----EEMKE---LYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFY-EKKSPWLWRCHIDLSSP---------------  161 (416)
T ss_dssp             ----HHHHH---HHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGS-CCCSCEEEECCSCCSSC---------------
T ss_pred             ----HHHHH---HHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHH-HhcCCEEEEEccccCCc---------------
Confidence                00011   11112233556677889999998775554433222 33488999888653100               


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEE-EcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC-------
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIM-VNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT-------  282 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii-~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~-------  282 (488)
                                   ....++    ..+..+.++|.++ ++|+..++.+    . ..++.+++|++|...+.+..       
T Consensus       162 -------------~~~~~~----~~~~~~~~~~~~i~~~s~~~~~~~----~-~~~~~vi~ngvd~~~~~~~~~~~~~~~  219 (416)
T 2x6q_A          162 -------------NREFWE----FLRRFVEKYDRYIFHLPEYVQPEL----D-RNKAVIMPPSIDPLSEKNVELKQTEIL  219 (416)
T ss_dssp             -------------CHHHHH----HHHHHHTTSSEEEESSGGGSCTTS----C-TTTEEECCCCBCTTSTTTSCCCHHHHH
T ss_pred             -------------cHHHHH----HHHHHHHhCCEEEEechHHHHhhC----C-ccceEEeCCCCChhhhcccccChhhHH
Confidence                         011111    1223456677776 5555544322    1 25789999999876543211       


Q ss_pred             -----CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCC
Q psy15555        283 -----HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLEN  357 (488)
Q Consensus       283 -----~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~  357 (488)
                           ....+++++++++|++.+.||++.+++|++.+.++.     |+++|+|+|.++.. ++++.+.++++++++++.+
T Consensus       220 ~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~-----~~~~l~i~G~g~~~-~~~~~~~l~~~~~~~~~~~  293 (416)
T 2x6q_A          220 RILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKI-----PGVQLLLVGVMAHD-DPEGWIYFEKTLRKIGEDY  293 (416)
T ss_dssp             HHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHC-----TTCEEEEEECCCTT-CHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhC-----CCeEEEEEecCccc-chhHHHHHHHHHHHhCCCC
Confidence                 012346789999999999999999999999999887     89999999999743 2345577889999999989


Q ss_pred             cEEEecCC---ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHH
Q psy15555        358 NVEFKVNL---PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVE  434 (488)
Q Consensus       358 ~v~~~g~~---~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~  434 (488)
                      +|.++|++   +++++..+|+.||++|.||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++|+++
T Consensus       294 ~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~----~~g~l~~d~~~  368 (416)
T 2x6q_A          294 DVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDG----ETGFLVRDANE  368 (416)
T ss_dssp             TEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBT----TTEEEESSHHH
T ss_pred             cEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCCh-hheecC----CCeEEECCHHH
Confidence            99999955   46799999999999999999999999999999999999999998886 899888    89999999999


Q ss_pred             HHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhh
Q psy15555        435 YAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       435 l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~  481 (488)
                      ++++|.++++ |++.++++++++++.+ ++|||+.+++++.++|++++
T Consensus       369 la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          369 AVEVVLYLLK-HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             HHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence            9999999999 9999999999999998 79999999999999999875

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=6.9e-38  Score=304.28  Aligned_cols=354  Identities=14%  Similarity=0.126  Sum_probs=260.6

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      |||+++++.....||.++++..++++|.++|+++.  +++.......               ..+ +.+..++...+.. 
T Consensus         1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~--v~~~~~~~~~---------------~~~-~~v~~~~~~~~~~-   61 (374)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVR--VYTQSWEGDC---------------PKA-FELIQVPVKSHTN-   61 (374)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEE--EEESEECSCC---------------CTT-CEEEECCCCCSSH-
T ss_pred             CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEE--EEecCCCCCC---------------CCC-cEEEEEccCcccc-
Confidence            89999988766678899999999999999955555  4444321111               012 5555554332210 


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhh-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFS-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                           .   .........+.+.+++.+||+||.+...+....... .....+.+...|..                    
T Consensus        62 -----~---~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  113 (374)
T 2iw1_A           62 -----H---GRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGF--------------------  113 (374)
T ss_dssp             -----H---HHHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHHHHHHHCCH--------------------
T ss_pred             -----h---hhHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccceeeeecccc--------------------
Confidence                 0   111222344667788899999997754332211110 00011111100100                    


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhc--ccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccCCC----
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGK--YSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKITHS----  284 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~~~----  284 (488)
                              .... ...++.+..+++..+.  .+|.++++|+..++.+.+.++.+ .++.+++|++|.+.+.+....    
T Consensus       114 --------~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~  184 (374)
T 2iw1_A          114 --------LYRL-TSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSRE  184 (374)
T ss_dssp             --------HHHT-SHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHH
T ss_pred             --------hhhh-cHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHH
Confidence                    0000 0112233344554554  79999999999999999876654 589999999998877654321    


Q ss_pred             -------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHh-hhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        285 -------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQI-ISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       285 -------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~-~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                             ..+++++++++|++.+.||++.+++|++.+.++ .     ++++++++|.++.       ++++++++++++.
T Consensus       185 ~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~-----~~~~l~i~G~g~~-------~~~~~~~~~~~~~  252 (374)
T 2iw1_A          185 IYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLR-----HNTLLFVVGQDKP-------RKFEALAEKLGVR  252 (374)
T ss_dssp             HHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHH-----HTEEEEEESSSCC-------HHHHHHHHHHTCG
T ss_pred             HHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccC-----CceEEEEEcCCCH-------HHHHHHHHHcCCC
Confidence                   125678999999999999999999999999776 4     6899999999852       6788889999988


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC---CHH
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC---DEV  433 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~---~~~  433 (488)
                      ++|+++|+.  +++..+|+.||+++.||..|++|++++|||++|+|||+++.++.. |++.++    .+|++++   |++
T Consensus       253 ~~v~~~g~~--~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~----~~g~~~~~~~~~~  325 (374)
T 2iw1_A          253 SNVHFFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADA----NCGTVIAEPFSQE  325 (374)
T ss_dssp             GGEEEESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTT-HHHHHH----TCEEEECSSCCHH
T ss_pred             CcEEECCCc--ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCch-hhhccC----CceEEeCCCCCHH
Confidence            999999986  899999999999999999999999999999999999999999886 888887    7899875   899


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +++++|.++++ |++.++++++++++.+++++|+.+.+++.++++..+.
T Consensus       326 ~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  373 (374)
T 2iw1_A          326 QLNEVLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITGGLD  373 (374)
T ss_dssp             HHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence            99999999999 9999999999999999888999999999999987653

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=6.9e-37  Score=316.75  Aligned_cols=392  Identities=16%  Similarity=0.193  Sum_probs=271.9

Q ss_pred             cccEEEEeccCC----------CCCCCceehHHH--------HHHHHHHhCCCe--eEEEEeCCCCCChhHHHHHhhhhc
Q psy15555         51 VLKTVAFFHPYC----------NAGGGGERVLWT--------AVLALHQKYPDY--KIYIYTGDVDASPSEIIKRAHQRF  110 (488)
Q Consensus        51 ~~~rI~~~~~~~----------~~~gG~e~~~~~--------l~~~L~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~  110 (488)
                      ..++|+++++..          ...||.+.++.+        ++++|.++|+++  +|.++|.........   ..... 
T Consensus       277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g~---~y~~~-  352 (816)
T 3s28_A          277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGT---TCGER-  352 (816)
T ss_dssp             CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTTS---STTSS-
T ss_pred             ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCCC---ccCCc-
Confidence            358999987654          355666788885        666667787766  355666553322110   00000 


Q ss_pred             ccccC-CCeeEEEEeeccce-------ee-ccCchhHHHHHHHHHHHHHHHHHhh--hcCCcEEEecCCccchhh-hhhh
Q psy15555        111 NIVLP-DQVINFVYLYRRKF-------VE-ASLYPYFTLLGQSIGSMILGVEALL--SFQPDIYIDTMGYAFTYP-LFSY  178 (488)
Q Consensus       111 ~~~~~-~~~v~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~l~--~~~pDiii~~~~~~~~~~-~~~~  178 (488)
                      ...+. .+++.++++|....       .. ...++.+..+..     .....+++  ..+|||||.+........ .++.
T Consensus       353 ~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~-----~~l~~il~~~~~~PDVIHsH~~~sglva~llar  427 (816)
T 3s28_A          353 LERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTE-----DAAVELSKELNGKPDLIIGNYSDGNLVASLLAH  427 (816)
T ss_dssp             EEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHH-----HHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHH
T ss_pred             ceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHH-----HHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHH
Confidence            01111 11277777766431       21 223333322210     11222332  347999998753333222 2333


Q ss_pred             hCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHH--HHHHHHhcccCEEEEcChhHHHHH
Q psy15555        179 IGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFA--LLYSHVGKYSDIIMVNSSWTEEHV  256 (488)
Q Consensus       179 ~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~ii~~s~~~~~~~  256 (488)
                      ..++|++.+.|......       ..          ........... .++...  ..++.+++.+|.|+++|+..++.+
T Consensus       428 ~~gvP~V~T~Hsl~~~k-------~~----------~~~~~~~~~~~-~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l  489 (816)
T 3s28_A          428 KLGVTQCTIAHALEKTK-------YP----------DSDIYWKKLDD-KYHFSCQFTADIFAMNHTDFIITSTFQEIAGS  489 (816)
T ss_dssp             HHTCCEEEECSCCHHHH-------ST----------TTTTTHHHHHH-HHCHHHHHHHHHHHHHHSSEEEESCHHHHHCC
T ss_pred             HcCCCEEEEEecccccc-------cc----------cccchhhhHHH-HHHHHHHHHHHHHHHHhCCEEEECCHHHHHHH
Confidence            56899999988542100       00          00000001111 111111  235668899999999999988853


Q ss_pred             HHH---hcc-------------------CCceEEEcCCCCchhhhccCCC----------------------------CC
Q psy15555        257 IQL---WNC-------------------QLKTYKLYPPCDTEDLKKITHS----------------------------KT  286 (488)
Q Consensus       257 ~~~---~~~-------------------~~k~~vi~~~~d~~~~~~~~~~----------------------------~~  286 (488)
                      .+.   +..                   ..|+.+||||+|.+.|.+....                            ..
T Consensus       490 ~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~  569 (816)
T 3s28_A          490 KETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKD  569 (816)
T ss_dssp             SSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSC
T ss_pred             HHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCC
Confidence            221   111                   1289999999998887654311                            13


Q ss_pred             CCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCC-----CCcHHHHHHHHHHHHhcCCCCcEEE
Q psy15555        287 DGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRN-----EEDEVCVKDMQDLCKHLSLENNVEF  361 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~-----~~~~~~~~~l~~~~~~~~l~~~v~~  361 (488)
                      .++++++++|++.+.||++.+++|++.+.+..     ++++|+|+|++++     .++.+..++++++++++++.++|.|
T Consensus       570 ~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~-----~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~f  644 (816)
T 3s28_A          570 KKKPILFTMARLDRVKNLSGLVEWYGKNTRLR-----ELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRW  644 (816)
T ss_dssp             TTSCEEEEECCCCTTTTHHHHHHHHHHCHHHH-----HHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEE
T ss_pred             CCCeEEEEEccCcccCCHHHHHHHHHHHHhhC-----CCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEE
Confidence            56789999999999999999999999998877     7999999999972     1123466889999999999999999


Q ss_pred             ecCC----ChHHHHHHHH-hCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHH
Q psy15555        362 KVNL----PYEDMKKEFS-EGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVE  434 (488)
Q Consensus       362 ~g~~----~~~el~~~~~-~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~  434 (488)
                      +|.+    +.+|+..+|+ .||++|.||..|+||++++|||+||+|||+++.+|.. |++.++    .+|++++  |+++
T Consensus       645 lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg----~~Gllv~p~D~e~  719 (816)
T 3s28_A          645 ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHG----KSGFHIDPYHGDQ  719 (816)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBT----TTBEEECTTSHHH
T ss_pred             ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChH-HHHccC----CcEEEeCCCCHHH
Confidence            9955    4589999998 5799999999999999999999999999999999997 999888    8999987  8999


Q ss_pred             HHHHHHHHH----ccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHh
Q psy15555        435 YAQTIKLIL----HLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       435 l~~~i~~ll----~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++++|.+++    . |++.+++++++|++.+ ++|||+.+++++.++|+.+
T Consensus       720 LA~aI~~lL~~Ll~-d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~  769 (816)
T 3s28_A          720 AADTLADFFTKCKE-DPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY  769 (816)
T ss_dssp             HHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            999997766    7 9999999999999999 9999999999999999865

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=1.1e-36  Score=306.18  Aligned_cols=400  Identities=12%  Similarity=0.070  Sum_probs=261.2

Q ss_pred             cEEEEeccCCCC---CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhh-----h--------ccc--cc
Q psy15555         53 KTVAFFHPYCNA---GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQ-----R--------FNI--VL  114 (488)
Q Consensus        53 ~rI~~~~~~~~~---~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~--------~~~--~~  114 (488)
                      |||+++++.+.+   .||.++++..++++|.++|  ++|.+++...+    ........     .        ...  ..
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG--VRTRTLIPGYP----AVKAAVTDPVKCFEFTDLLGEKADLLEVQ   74 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCH----HHHHHCCSCEEEEEESCSSSCCEEEEEEE
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC--CeEEEEecccc----cccccccccceeEEEEEecCCeEEEEEEE
Confidence            899999876543   5789999999999999985  45555444311    11111000     0        000  00


Q ss_pred             CCCeeEEEEeeccceeecc--Cch---------hHHHHHHHHHHHHHHHHHh-hhcCCcEEEecCCccchhhhh-hhh--
Q psy15555        115 PDQVINFVYLYRRKFVEAS--LYP---------YFTLLGQSIGSMILGVEAL-LSFQPDIYIDTMGYAFTYPLF-SYI--  179 (488)
Q Consensus       115 ~~~~v~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~l-~~~~pDiii~~~~~~~~~~~~-~~~--  179 (488)
                      ..+ +.+..++......+.  .+.         ....+...........+.+ ++.+|||||.+...+..++.+ +..  
T Consensus        75 ~~g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~  153 (485)
T 1rzu_A           75 HER-LDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAET  153 (485)
T ss_dssp             ETT-EEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSS
T ss_pred             ecC-ceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhccc
Confidence            123 666655443211111  110         0000000111111122222 467999999876433333332 222  


Q ss_pred             CCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH
Q psy15555        180 GGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL  259 (488)
Q Consensus       180 ~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~  259 (488)
                      .++|++.++|...............   .+    +... ........++ ....+++..++.+|.++++|+..++.+.+.
T Consensus       154 ~~~p~v~t~H~~~~~~~~~~~~~~~---~~----~~~~-~~~~~~~~~~-~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~  224 (485)
T 1rzu_A          154 PEIPSLLTIHNIAFQGQFGANIFSK---LA----LPAH-AFGMEGIEYY-NDVSFLKGGLQTATALSTVSPSYAEEILTA  224 (485)
T ss_dssp             CCCCEEEEESCTTCCCEECGGGGGG---SC----CCGG-GSSTTTTEET-TEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred             CCCCEEEEecCccccCCCCHHHHhh---cC----CChh-hccccccccc-ccccHHHHHHhhcCEEEecCHhHHHHHhcc
Confidence            6899999999753210000000000   00    0000 0000000000 000133456678999999999999999774


Q ss_pred             -hc---------cCCceEEEcCCCCchhhhccCCC--------------------------CCC-CCeEEEEeeccCCCC
Q psy15555        260 -WN---------CQLKTYKLYPPCDTEDLKKITHS--------------------------KTD-GPVKIISVAQFRPEK  302 (488)
Q Consensus       260 -~~---------~~~k~~vi~~~~d~~~~~~~~~~--------------------------~~~-~~~~i~~~g~~~~~k  302 (488)
                       ++         .+.++.+++||+|.+.+.+....                          ... +.++++++|++.+.|
T Consensus       225 ~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~K  304 (485)
T 1rzu_A          225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQK  304 (485)
T ss_dssp             HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTT
T ss_pred             ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCcccc
Confidence             33         34589999999998877554311                          112 256999999999999


Q ss_pred             ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE-EecCCChHHHHHHHHhCcEEE
Q psy15555        303 DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE-FKVNLPYEDMKKEFSEGLIGL  381 (488)
Q Consensus       303 ~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~el~~~~~~ad~~v  381 (488)
                      |++.+++|++.+.+       ++++|+|+|+++.    ++.+++++++++++  ++|+ +.|. +.+++..+|+.||++|
T Consensus       305 g~~~li~a~~~l~~-------~~~~l~ivG~g~~----~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~v  370 (485)
T 1rzu_A          305 GIDLMAEAVDEIVS-------LGGRLVVLGAGDV----ALEGALLAAASRHH--GRVGVAIGY-NEPLSHLMQAGCDAII  370 (485)
T ss_dssp             THHHHHTTHHHHHH-------TTCEEEEEECBCH----HHHHHHHHHHHHTT--TTEEEEESC-CHHHHHHHHHHCSEEE
T ss_pred             CHHHHHHHHHHHHh-------cCceEEEEeCCch----HHHHHHHHHHHhCC--CcEEEecCC-CHHHHHHHHhcCCEEE
Confidence            99999999999975       4889999999851    35578888888875  6787 7888 7788899999999999


Q ss_pred             EcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCC------ccccceecC--CHHHHHHHHHHHH---ccCHHHH
Q psy15555        382 HAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPE------TCRNGFLAC--DEVEYAQTIKLIL---HLSQDTK  450 (488)
Q Consensus       382 ~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~------~~~~g~~~~--~~~~l~~~i~~ll---~~~~~~~  450 (488)
                      +||..|++|++++|||++|+|||+++.+|.. |++.++ .      ...+|++++  |+++++++|.+++   + |++.+
T Consensus       371 ~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~-e~v~~~-~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~~  447 (485)
T 1rzu_A          371 IPSRFEPCGLTQLYALRYGCIPVVARTGGLA-DTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYH-DPKLW  447 (485)
T ss_dssp             ECCSCCSSCSHHHHHHHHTCEEEEESSHHHH-HHCCBC-CHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHT-CHHHH
T ss_pred             ECcccCCCCHHHHHHHHCCCCEEEeCCCChh-heeccc-ccccccccCCcceEeCCCCHHHHHHHHHHHHHHhC-CHHHH
Confidence            9999999999999999999999999999886 888652 0      003788876  9999999999999   7 99999


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhccC
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMKKS  487 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~~s  487 (488)
                      +++++++++  ++|||+.+++++.++|++++.....+
T Consensus       448 ~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~~~~~~  482 (485)
T 1rzu_A          448 TQMQKLGMK--SDVSWEKSAGLYAALYSQLISKGHHH  482 (485)
T ss_dssp             HHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC-----
T ss_pred             HHHHHHHHH--HhCChHHHHHHHHHHHHHhhCCCCCc
Confidence            999999875  89999999999999999998866553

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=2.8e-36  Score=303.24  Aligned_cols=399  Identities=13%  Similarity=0.059  Sum_probs=261.4

Q ss_pred             cEEEEeccCCCC---CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhh--------cc--ccc----C
Q psy15555         53 KTVAFFHPYCNA---GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQR--------FN--IVL----P  115 (488)
Q Consensus        53 ~rI~~~~~~~~~---~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~--~~~----~  115 (488)
                      |||+++++.+.+   .||.++++..++++|.++|  ++|.+++...+    .........        ++  ..+    .
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G--~~V~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG--VDARVLLPAFP----DIRRGVTDAQVVSRRDTFAGHITLLFGHY   74 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT--CEEEEEEECCH----HHHHHCTTCEEEEEECCTTCCEEEEEEEE
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC--CEEEEEecCcc----ccccccccceeEEEecccCCcEEEEEEEE
Confidence            899999876543   5789999999999999995  44555444321    111110000        00  000    1


Q ss_pred             CCeeEEEEeeccceeecc--Cch------hHHHHHHHHHHHHHHHHHhhh----cCCcEEEecCCccchhhhh-h-hhCC
Q psy15555        116 DQVINFVYLYRRKFVEAS--LYP------YFTLLGQSIGSMILGVEALLS----FQPDIYIDTMGYAFTYPLF-S-YIGG  181 (488)
Q Consensus       116 ~~~v~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~l~~----~~pDiii~~~~~~~~~~~~-~-~~~~  181 (488)
                      .+ +.+..++......+.  .+.      +.............+.++++.    .+|||||.+...+..++.+ + ...+
T Consensus        75 ~g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~  153 (485)
T 2qzs_A           75 NG-VGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRP  153 (485)
T ss_dssp             TT-EEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCS
T ss_pred             CC-cEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCC
Confidence            23 666655432211111  110      000000000111223444543    7899999876444444433 2 2568


Q ss_pred             CeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHH-h
Q psy15555        182 SKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQL-W  260 (488)
Q Consensus       182 ~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-~  260 (488)
                      +|++.++|............... ..... ..+..... ..      .....+++..++.+|.++++|+.+++.+.+. +
T Consensus       154 ~p~v~t~H~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~-~~------~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~  224 (485)
T 2qzs_A          154 AKSVFTVHNLAYQGMFYAHHMND-IQLPW-SFFNIHGL-EF------NGQISFLKAGLYYADHITAVSPTYAREITEPQF  224 (485)
T ss_dssp             SEEEEEESCTTCCCEEEGGGGGT-TTCCG-GGCSTTTT-EE------TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHH
T ss_pred             CCEEEEecCccccCCCCHHHHHh-cCCCc-hhcccccc-cc------cccccHHHHHHHhcCeEEecCHHHHHHHhcccc
Confidence            99999999753210000000000 00000 00000000 00      0001133456678999999999999998764 3


Q ss_pred             cc---------C--CceEEEcCCCCchhhhccCCC--------------------------CC--CCCeEEEEeeccCCC
Q psy15555        261 NC---------Q--LKTYKLYPPCDTEDLKKITHS--------------------------KT--DGPVKIISVAQFRPE  301 (488)
Q Consensus       261 ~~---------~--~k~~vi~~~~d~~~~~~~~~~--------------------------~~--~~~~~i~~~g~~~~~  301 (488)
                      +.         +  .++.+++|++|.+.+.+....                          ..  .+.++++++|++.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~  304 (485)
T 2qzs_A          225 AYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQ  304 (485)
T ss_dssp             HTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGG
T ss_pred             CcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccc
Confidence            31         2  689999999998877553211                          11  256899999999999


Q ss_pred             CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE-EecCCChHHHHHHHHhCcEE
Q psy15555        302 KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE-FKVNLPYEDMKKEFSEGLIG  380 (488)
Q Consensus       302 k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~-~~g~~~~~el~~~~~~ad~~  380 (488)
                      ||++.+++|++.+.+       ++++|+|+|.++.    ++.+++++++++++  ++|. +.|. +.+++..+|+.||++
T Consensus       305 Kg~~~li~a~~~l~~-------~~~~l~ivG~g~~----~~~~~l~~~~~~~~--~~v~~~~g~-~~~~~~~~~~~adv~  370 (485)
T 2qzs_A          305 KGLDLVLEALPGLLE-------QGGQLALLGAGDP----VLQEGFLAAAAEYP--GQVGVQIGY-HEAFSHRIMGGADVI  370 (485)
T ss_dssp             GCHHHHHHHHHHHHH-------TTCEEEEEEEECH----HHHHHHHHHHHHST--TTEEEEESC-CHHHHHHHHHHCSEE
T ss_pred             cCHHHHHHHHHHHhh-------CCcEEEEEeCCch----HHHHHHHHHHHhCC--CcEEEeCCC-CHHHHHHHHHhCCEE
Confidence            999999999999875       4789999999852    35588888888875  6786 7888 788889999999999


Q ss_pred             EEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCC-----CccccceecC--CHHHHHHHHHHHH---ccCHHHH
Q psy15555        381 LHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP-----ETCRNGFLAC--DEVEYAQTIKLIL---HLSQDTK  450 (488)
Q Consensus       381 v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~-----~~~~~g~~~~--~~~~l~~~i~~ll---~~~~~~~  450 (488)
                      |+||..|++|++++|||++|+|||+++.+|.. |++.+++     ....+|++++  |+++++++|.+++   + |++.+
T Consensus       371 v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~-~~~~~  448 (485)
T 2qzs_A          371 LVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWS-RPSLW  448 (485)
T ss_dssp             EECCSCCSSCSHHHHHHHHTCEEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHT-SHHHH
T ss_pred             EECCccCCCcHHHHHHHHCCCCEEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcC-CHHHH
Confidence            99999999999999999999999999999886 8886520     0003789886  9999999999999   7 99999


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                      +++++++++  ++|||+.+++++.++|+++.....
T Consensus       449 ~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~~~  481 (485)
T 2qzs_A          449 RFVQRQAMA--MDFSWQVAAKSYRELYYRLKLEHH  481 (485)
T ss_dssp             HHHHHHHHH--CCCCHHHHHHHHHHHHHHHC----
T ss_pred             HHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhhhc
Confidence            999999875  899999999999999999876543

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=8.2e-36  Score=285.98  Aligned_cols=310  Identities=12%  Similarity=0.022  Sum_probs=244.9

Q ss_pred             ccEEEEeccC--------C---C--CCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCe
Q psy15555         52 LKTVAFFHPY--------C---N--AGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQV  118 (488)
Q Consensus        52 ~~rI~~~~~~--------~---~--~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (488)
                      +|||+++.+.        +   .  ..||.++++..++++|.++  +++|.+++........               .. 
T Consensus         3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~--G~~v~v~~~~~~~~~~---------------~~-   64 (342)
T 2iuy_A            3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL--GHEVFLLGAPGSPAGR---------------PG-   64 (342)
T ss_dssp             CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT--TCEEEEESCTTSCCCS---------------TT-
T ss_pred             ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc--CCeEEEEecCCCCCCC---------------Cc-
Confidence            5999999877        1   2  3478899999999999998  5667777665332210               11 


Q ss_pred             eEEEEeeccceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHH
Q psy15555        119 INFVYLYRRKFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEML  198 (488)
Q Consensus       119 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~  198 (488)
                      +.+...  ..+                   ..+.+.+++.+||+||.+...+... . ....++| +.+.|......   
T Consensus        65 ~~~~~~--~~~-------------------~~l~~~l~~~~~Dvi~~~~~~~~~~-~-~~~~~~p-v~~~h~~~~~~---  117 (342)
T 2iuy_A           65 LTVVPA--GEP-------------------EEIERWLRTADVDVVHDHSGGVIGP-A-GLPPGTA-FISSHHFTTRP---  117 (342)
T ss_dssp             EEECSC--CSH-------------------HHHHHHHHHCCCSEEEECSSSSSCS-T-TCCTTCE-EEEEECSSSBC---
T ss_pred             ceeccC--CcH-------------------HHHHHHHHhcCCCEEEECCchhhHH-H-HhhcCCC-EEEecCCCCCc---
Confidence            222111  100                   1355677888999999877554332 2 2356889 99999654100   


Q ss_pred             HHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhh
Q psy15555        199 TRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDL  278 (488)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~  278 (488)
                                                               ..+|.++++|+..++.+.+    ..++.+++|++|.+.+
T Consensus       118 -----------------------------------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~  152 (342)
T 2iuy_A          118 -----------------------------------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARY  152 (342)
T ss_dssp             -----------------------------------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGS
T ss_pred             -----------------------------------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhc
Confidence                                                     0179999999999998876    4578999999998877


Q ss_pred             hccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCc
Q psy15555        279 KKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENN  358 (488)
Q Consensus       279 ~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~  358 (488)
                      .+..... .++++++++|++.+.||++.+++|++.+          +++|+|+|.++..      +++++++++++  ++
T Consensus       153 ~~~~~~~-~~~~~i~~vG~~~~~Kg~~~li~a~~~~----------~~~l~i~G~g~~~------~~l~~~~~~~~--~~  213 (342)
T 2iuy_A          153 RSAADQV-AKEDFLLFMGRVSPHKGALEAAAFAHAC----------GRRLVLAGPAWEP------EYFDEITRRYG--ST  213 (342)
T ss_dssp             CCSTTCC-CCCSCEEEESCCCGGGTHHHHHHHHHHH----------TCCEEEESCCCCH------HHHHHHHHHHT--TT
T ss_pred             CcccccC-CCCCEEEEEeccccccCHHHHHHHHHhc----------CcEEEEEeCcccH------HHHHHHHHHhC--CC
Confidence            6554322 3456899999999999999999999876          5689999998743      66777777776  78


Q ss_pred             EEEecCCChHHHHHHHHhCcEEEEcCC----------CCcCCccHHHHHHcCCcEEEeCCCCCccceecc--CCCccccc
Q psy15555        359 VEFKVNLPYEDMKKEFSEGLIGLHAMW----------NEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIE--DPETCRNG  426 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad~~v~~s~----------~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~--~~~~~~~g  426 (488)
                      |+++|+++++|+.++|+.||+++.||.          .|++|++++|||++|+|||+++.++.. |++.+  +    .+|
T Consensus       214 v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~----~~g  288 (342)
T 2iuy_A          214 VEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGE----VVG  288 (342)
T ss_dssp             EEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEE----ECC
T ss_pred             EEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCC----Cce
Confidence            999999999999999999999999999          899999999999999999999999886 99988  7    789


Q ss_pred             eecC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        427 FLAC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       427 ~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ++++ |+++++++|.++++         ++++++.+ ++|||+.+++++.++|+++++..
T Consensus       289 ~~~~~d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  339 (342)
T 2iuy_A          289 YGTDFAPDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA  339 (342)
T ss_dssp             SSSCCCHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred             EEcCCCHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence            9988 99999999999874         66778877 99999999999999999998753

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=7.1e-34  Score=285.59  Aligned_cols=227  Identities=15%  Similarity=0.130  Sum_probs=185.1

Q ss_pred             HHHHhcccCEEEEcChhHHHHHHHHhcc---------CCceEEEcCCCCchhhhccCCC---------------------
Q psy15555        235 YSHVGKYSDIIMVNSSWTEEHVIQLWNC---------QLKTYKLYPPCDTEDLKKITHS---------------------  284 (488)
Q Consensus       235 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~---------~~k~~vi~~~~d~~~~~~~~~~---------------------  284 (488)
                      .+..+..||.|+++|+..++.+.+.++.         ..++.+|+||+|.+.+.+....                     
T Consensus       235 ~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~  314 (536)
T 3vue_A          235 MKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEA  314 (536)
T ss_dssp             HHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHH
T ss_pred             HHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHH
Confidence            3446677999999999999998775431         2479999999999888764311                     


Q ss_pred             --------CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        285 --------KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       285 --------~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                              ..++.++|+++||+.++||++.+++|+.++.+       .+.+++++|.|+.    +..+.++.....+  +
T Consensus       315 l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~-------~~~~l~l~G~G~~----~~~~~~~~~~~~~--~  381 (536)
T 3vue_A          315 LQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ-------EDVQIVLLGTGKK----KFEKLLKSMEEKY--P  381 (536)
T ss_dssp             HHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT-------SSCEEEEECCBCH----HHHHHHHHHHHHS--T
T ss_pred             HHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh-------hCCeEEEEeccCc----hHHHHHHHHHhhc--C
Confidence                    12467899999999999999999999999975       4678999998852    3335555555554  4


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccce---------
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGF---------  427 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~---------  427 (488)
                      +++.+.+..+.+++..+|+.||+||+||..|+||++++|||+||+|||+++.+|.. |++.++    .+|+         
T Consensus       382 ~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg----~~G~~~~~~~~~g  456 (536)
T 3vue_A          382 GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLV-DTVIEG----KTGFHMGRLSVDC  456 (536)
T ss_dssp             TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBT----TTEEECCCCCSCT
T ss_pred             CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCch-heeeCC----CCccccccCCCce
Confidence            67999999999999999999999999999999999999999999999999999997 999988    7776         


Q ss_pred             -ecC--CHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        428 -LAC--DEVEYAQTIKLILHL-SQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       428 -~~~--~~~~l~~~i~~ll~~-~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                       +++  |+++|+++|.+++.. +.+.++++++++.+  ++|||++.+++|.++|+++.
T Consensus       457 ~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am~--~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          457 KVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMN--QDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHH--SCCSSHHHHHHHHHHHHTTC
T ss_pred             eEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHhh
Confidence             454  789999999887641 33456777776643  78999999999999999874

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=3.6e-33  Score=272.49  Aligned_cols=217  Identities=18%  Similarity=0.131  Sum_probs=169.7

Q ss_pred             HHHhcccC--EEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeecc-CCCCChHHHHHHHH
Q psy15555        236 SHVGKYSD--IIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQF-RPEKDHPLQLRAMY  312 (488)
Q Consensus       236 ~~~~~~~d--~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~-~~~k~~~~ll~a~~  312 (488)
                      +...+.++  .++++|+++++.+.+.+....++.+++|++|.+.+..... ...++..++++||+ .+.||++.+++|++
T Consensus       187 ~~~~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~~-~~~~~~~il~~gr~~~~~Kg~~~li~A~~  265 (413)
T 2x0d_A          187 ESTYKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIND-KRQKEKIILVYGRPSVKRNAFTLIVEALK  265 (413)
T ss_dssp             HHTTSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTTS-CCCCCSEEEEEECTTCGGGCHHHHHHHHH
T ss_pred             HHHhccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhccccc-ccCCCCEEEEEecCchhccCHHHHHHHHH
Confidence            34555554  6899999999999986332357889999999876543221 22345678899996 57899999999999


Q ss_pred             HhHHhhhhhccCc---eEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcC
Q psy15555        313 QLRQIISEELWDN---LKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHF  389 (488)
Q Consensus       313 ~l~~~~~~~~~~~---~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~  389 (488)
                      .+.++.     |+   ++|+++|.++..             .++++.++|+|+|.++.+|+.++|+.||+|++||..|++
T Consensus       266 ~l~~~~-----~~~~~~~l~ivG~~~~~-------------~~l~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~  327 (413)
T 2x0d_A          266 IFVQKY-----DRSNEWKIISVGEKHKD-------------IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHP  327 (413)
T ss_dssp             HHHHHC-----TTGGGCEEEEEESCCCC-------------EEEETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSC
T ss_pred             HHHHhC-----CCCCceEEEEEcCCchh-------------hhcCCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCC
Confidence            998776     54   899999998632             245667789999999999999999999999999999999


Q ss_pred             CccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHH
Q psy15555        390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME  467 (488)
Q Consensus       390 g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~  467 (488)
                      |++++||||||+|||+++ +|.. |++.++    .+|++++  |+++++++|.++++ |++.+++   ++++.+++|||+
T Consensus       328 g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~----~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~---~~~~~~~~~~W~  397 (413)
T 2x0d_A          328 SYPPLEMAHFGLRVITNK-YENK-DLSNWH----SNIVSLEQLNPENIAETLVELCM-SFNNRDV---DKKESSNMMFYI  397 (413)
T ss_dssp             CSHHHHHHHTTCEEEEEC-BTTB-CGGGTB----TTEEEESSCSHHHHHHHHHHHHH-HTC----------CCBSCGGGC
T ss_pred             CcHHHHHHhCCCcEEEeC-CCcc-hhhhcC----CCEEEeCCCCHHHHHHHHHHHHc-CHHHHHH---hHHHHHHhCCHH
Confidence            999999999999999954 5665 899888    8999876  99999999999999 8887776   566666889999


Q ss_pred             HHHHHHHHHHHHhhh
Q psy15555        468 EFKNGFLTFTQPLFK  482 (488)
Q Consensus       468 ~~~~~~~~~~~~~~~  482 (488)
                      ...++ .+++++++.
T Consensus       398 ~~~~~-~~~~~~l~~  411 (413)
T 2x0d_A          398 NEFNE-FSFIKEIEE  411 (413)
T ss_dssp             CCC----TTHHHHHT
T ss_pred             HHHHH-HHHHHHHHh
Confidence            99888 677777654

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=99.97  E-value=7.8e-31  Score=256.29  Aligned_cols=246  Identities=11%  Similarity=0.058  Sum_probs=187.9

Q ss_pred             CCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHH
Q psy15555        159 QPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHV  238 (488)
Q Consensus       159 ~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (488)
                      ++|+||....+...+..+....++|++...|.......                       ..     ........++..
T Consensus       124 ~~DvIh~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-----------------------~~-----~~~~~~~~~~~~  175 (406)
T 2hy7_A          124 ESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLST-----------------------IN-----VASYIEREFDRV  175 (406)
T ss_dssp             HCSEEEEESSGGGGGHHHHHHHCTTSEEEEEESSCHHH-----------------------HT-----CCHHHHHHHHHH
T ss_pred             CCCEEEECCchHHHHHHHHHHhCCCEEEEEeccchhhc-----------------------cc-----ccHHHHHHHHHH
Confidence            69998844333322112222568899988885431000                       00     011223456678


Q ss_pred             hcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhh
Q psy15555        239 GKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQII  318 (488)
Q Consensus       239 ~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~  318 (488)
                      ++.+|.++++|+.+++.+.+.+    ++.+++|++|.+.+.+......+++++++|+|++.+.||+      +..+.+..
T Consensus       176 ~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~  245 (406)
T 2hy7_A          176 APTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAF  245 (406)
T ss_dssp             GGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHC
T ss_pred             HHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhC
Confidence            8999999999999999887643    7999999999888866543222334899999999999997      34444455


Q ss_pred             hhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHH-
Q psy15555        319 SEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECM-  397 (488)
Q Consensus       319 ~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~-  397 (488)
                           ++++|+|+|+|+              ++++++.++|+|+|.++.+|+..+|+.||+++.||..|++|++++||| 
T Consensus       246 -----~~~~l~ivG~g~--------------~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~  306 (406)
T 2hy7_A          246 -----PQVTFHVIGSGM--------------GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSM  306 (406)
T ss_dssp             -----TTEEEEEESCSS--------------CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCH
T ss_pred             -----CCeEEEEEeCch--------------HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHH
Confidence                 899999999874              455677889999999999999999999999999999999999999999 


Q ss_pred             ------HcCCcEEEeCCCCCccceeccCCCcccccee-cC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHH
Q psy15555        398 ------AAGLIMIAHKSGGPKMDIVIEDPETCRNGFL-AC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEE  468 (488)
Q Consensus       398 ------a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~-~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~  468 (488)
                            +||+|||+++.       +.++    .+|++ ++  |+++++++|.++++ +++         ++..++|||+.
T Consensus       307 Kl~eYla~G~PVIas~~-------v~~~----~~G~l~v~~~d~~~la~ai~~ll~-~~~---------~~~~~~~sw~~  365 (406)
T 2hy7_A          307 KLLQYDFFGLPAVCPNA-------VVGP----YKSRFGYTPGNADSVIAAITQALE-APR---------VRYRQCLNWSD  365 (406)
T ss_dssp             HHHHHHHHTCCEEEEGG-------GTCS----CSSEEEECTTCHHHHHHHHHHHHH-CCC---------CCCSCCCBHHH
T ss_pred             HHHHHhhCCCcEEEehh-------cccC----cceEEEeCCCCHHHHHHHHHHHHh-Ccc---------hhhhhcCCHHH
Confidence                  99999999986       4445    67888 65  99999999999998 766         12238999999


Q ss_pred             HHHHHHHH--HHHhhh
Q psy15555        469 FKNGFLTF--TQPLFK  482 (488)
Q Consensus       469 ~~~~~~~~--~~~~~~  482 (488)
                      +++++.++  |+++..
T Consensus       366 ~a~~~~~~~~y~~~~~  381 (406)
T 2hy7_A          366 TTDRVLDPRAYPETRL  381 (406)
T ss_dssp             HHHHHHCGGGSGGGBS
T ss_pred             HHHHHHHhhcccccCc
Confidence            99999999  776543

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=99.97  E-value=1.4e-29  Score=244.75  Aligned_cols=336  Identities=11%  Similarity=0.058  Sum_probs=232.6

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      .|||+++..   ..||.++.+..++++|.++  +++|.+++...+. .....+.          .+ +.+..++......
T Consensus         6 ~mkIl~~~~---~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~-~~~~~~~----------~g-~~~~~~~~~~~~~   68 (364)
T 1f0k_A            6 GKRLMVMAG---GTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRM-EADLVPK----------HG-IEIDFIRISGLRG   68 (364)
T ss_dssp             -CEEEEECC---SSHHHHHHHHHHHHHHHTT--TCEEEEEECTTST-HHHHGGG----------GT-CEEEECCCCCCTT
T ss_pred             CcEEEEEeC---CCccchhHHHHHHHHHHHc--CCEEEEEecCCcc-hhhhccc----------cC-CceEEecCCccCc
Confidence            389999863   3457888899999999998  5666676665321 1111100          12 4444444322111


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccC
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNN  210 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~  210 (488)
                      ......+......+.......+.+++.+||+||.+..++.... .+....++|++...|...                  
T Consensus        69 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------  130 (364)
T 1f0k_A           69 KGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------  130 (364)
T ss_dssp             CCHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------
Confidence            1111111111222334455677888899999998865543322 333356899988777431                  


Q ss_pred             ccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC----CCC
Q psy15555        211 SQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH----SKT  286 (488)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~----~~~  286 (488)
                               ...           ..+.+.+.+|.+++.++..       +  + ++.+++|+++.+.+.+...    ...
T Consensus       131 ---------~~~-----------~~~~~~~~~d~v~~~~~~~-------~--~-~~~~i~n~v~~~~~~~~~~~~~~~~~  180 (364)
T 1f0k_A          131 ---------AGL-----------TNKWLAKIATKVMQAFPGA-------F--P-NAEVVGNPVRTDVLALPLPQQRLAGR  180 (364)
T ss_dssp             ---------CCH-----------HHHHHTTTCSEEEESSTTS-------S--S-SCEECCCCCCHHHHTSCCHHHHHTTC
T ss_pred             ---------CcH-----------HHHHHHHhCCEEEecChhh-------c--C-CceEeCCccchhhcccchhhhhcccC
Confidence                     000           1223556789999998764       2  2 5789999999776543210    122


Q ss_pred             CCCe-EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceE-EEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        287 DGPV-KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLK-LIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       287 ~~~~-~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~-l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      .+++ +++++|++.+.|+.+.+++|++.+.+        +++ ++++|.++       .+++++.++++++ ++|.+.|+
T Consensus       181 ~~~~~il~~~g~~~~~k~~~~li~a~~~l~~--------~~~~l~i~G~~~-------~~~l~~~~~~~~~-~~v~~~g~  244 (364)
T 1f0k_A          181 EGPVRVLVVGGSQGARILNQTMPQVAAKLGD--------SVTIWHQSGKGS-------QQSVEQAYAEAGQ-PQHKVTEF  244 (364)
T ss_dssp             CSSEEEEEECTTTCCHHHHHHHHHHHHHHGG--------GEEEEEECCTTC-------HHHHHHHHHHTTC-TTSEEESC
T ss_pred             CCCcEEEEEcCchHhHHHHHHHHHHHHHhcC--------CcEEEEEcCCch-------HHHHHHHHhhcCC-CceEEecc
Confidence            3444 55666789899999999999998842        466 56788775       1678888888886 47999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc-------ceeccCCCccccceecC--C--HH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM-------DIVIEDPETCRNGFLAC--D--EV  433 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~-------eiv~~~~~~~~~g~~~~--~--~~  433 (488)
                      +  +++..+|+.||++|.||.    |++++|||++|+|||+++.+|...       ++++++     .|++++  |  ++
T Consensus       245 ~--~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-----~g~~~~~~d~~~~  313 (364)
T 1f0k_A          245 I--DDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-----AAKIIEQPQLSVD  313 (364)
T ss_dssp             C--SCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-----SEEECCGGGCCHH
T ss_pred             h--hhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-----cEEEeccccCCHH
Confidence            9  899999999999999983    899999999999999999987531       455554     599886  5  89


Q ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        434 EYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       434 ~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +++++|.++   |++.++++++++++.+++|+|+.+++++.++|++.-.
T Consensus       314 ~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~  359 (364)
T 1f0k_A          314 AVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEH  359 (364)
T ss_dssp             HHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred             HHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence            999999988   7889999999999888999999999999999987644

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=99.97  E-value=3.8e-29  Score=256.33  Aligned_cols=332  Identities=11%  Similarity=0.096  Sum_probs=235.3

Q ss_pred             ccccEEEEeccCCCCCCCceehHHHHHHH--HHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecc
Q psy15555         50 NVLKTVAFFHPYCNAGGGGERVLWTAVLA--LHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR  127 (488)
Q Consensus        50 ~~~~rI~~~~~~~~~~gG~e~~~~~l~~~--L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  127 (488)
                      .++|||+++.+.+.. ||.++++.++++.  +.+.  +++|++++..+... .........        . ..+..+  .
T Consensus       203 ~~~~rI~~~~~~~~~-~g~~~~~~~l~~~L~~~~~--~~~v~~~~~~~~~~-~~~~~~~~~--------~-~~~~~~--~  267 (568)
T 2vsy_A          203 KGPLRVGFVSNGFGA-HPTGLLTVALFEALQRRQP--DLQMHLFATSGDDG-STLRTRLAQ--------A-STLHDV--T  267 (568)
T ss_dssp             SSCEEEEEEESCSSS-SHHHHHHHHHHHHHHHHCT--TEEEEEEESSCCCS-CHHHHHHHH--------T-SEEEEC--T
T ss_pred             CCCeEEEEECccccc-ChHHHHHHHHHhhccCCcc--cEEEEEEECCCCCc-cHHHHHHHh--------c-CeEEEC--C
Confidence            567999999887764 4588999999999  6665  78888887653211 111111111        1 111111  0


Q ss_pred             ceeeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCcc--chhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhh
Q psy15555        128 KFVEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYA--FTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRV  205 (488)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~--~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~  205 (488)
                      .+      .           ...+.+.+++.+|||||...++.  ..+..+. .+..|++...|....            
T Consensus       268 ~~------~-----------~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------  317 (568)
T 2vsy_A          268 AL------G-----------HLATAKHIRHHGIDLLFDLRGWGGGGRPEVFA-LRPAPVQVNWLAYPG------------  317 (568)
T ss_dssp             TC------C-----------HHHHHHHHHHTTCSEEEECSSCTTCSSCHHHH-TCCSSEEEEESSSSS------------
T ss_pred             CC------C-----------HHHHHHHHHhCCCCEEEECCCCCCcchHHHHh-cCCCceeEeeecCCc------------
Confidence            00      0           02355678889999998665433  2223332 345666665542110            


Q ss_pred             hcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhcc--CC
Q psy15555        206 ITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKI--TH  283 (488)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~--~~  283 (488)
                                ... ...              .....+|.++++|+..++     +.  +++.++||.+++....+.  ..
T Consensus       318 ----------~~~-~~~--------------~~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~  365 (568)
T 2vsy_A          318 ----------TSG-APW--------------MDYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEP  365 (568)
T ss_dssp             ----------CCC-CTT--------------CCEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCC
T ss_pred             ----------ccC-CCC--------------ceEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCC
Confidence                      000 000              011236778888876543     32  578999986544321110  00


Q ss_pred             C-----CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEe-cCCCCCcHHHHHHHHHHHHhcCCC-
Q psy15555        284 S-----KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIG-STRNEEDEVCVKDMQDLCKHLSLE-  356 (488)
Q Consensus       284 ~-----~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG-~~~~~~~~~~~~~l~~~~~~~~l~-  356 (488)
                      .     ..++..+++++|++.+ ||++.+++|+.++.++.     |+++|+|+| .++      ..+++++.++++|+. 
T Consensus       366 ~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~-----~~~~l~i~G~~g~------~~~~l~~~~~~~~l~~  433 (568)
T 2vsy_A          366 PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREV-----PDSVLWLLSGPGE------ADARLRAFAHAQGVDA  433 (568)
T ss_dssp             CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHC-----TTCEEEEECCSTT------HHHHHHHHHHHTTCCG
T ss_pred             CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhC-----CCcEEEEecCCHH------HHHHHHHHHHHcCCCh
Confidence            0     0123345669999999 99999999999998887     899999999 664      348899999999998 


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEE-------eCCC-------CCccceeccCCCc
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIA-------HKSG-------GPKMDIVIEDPET  422 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~-------~~~~-------~~~~eiv~~~~~~  422 (488)
                      ++|+|.|+++.+++..+|+.||++|.||.. ++|++++|||++|+|||+       ++.+       |.. |++      
T Consensus       434 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v------  505 (568)
T 2vsy_A          434 QRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMN------  505 (568)
T ss_dssp             GGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGB------
T ss_pred             hHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhh------
Confidence            899999999999999999999999999998 999999999999999999       7776       554 443      


Q ss_pred             cccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHhhhhhc
Q psy15555        423 CRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSV---DRFSMEEFKNGFLTFTQPLFKVMK  485 (488)
Q Consensus       423 ~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~---~~~s~~~~~~~~~~~~~~~~~~~~  485 (488)
                            .+|++++++++.++++ |++.+++|++++++.+   +.|||+.+++++.++|++++....
T Consensus       506 ------~~~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~  564 (568)
T 2vsy_A          506 ------VADDAAFVAKAVALAS-DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG  564 (568)
T ss_dssp             ------CSSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred             ------cCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                  2389999999999999 9999999999999987   789999999999999999987543

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.97  E-value=4.6e-29  Score=240.71  Aligned_cols=306  Identities=13%  Similarity=0.075  Sum_probs=211.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeE--EEEeecccee
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVIN--FVYLYRRKFV  130 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~  130 (488)
                      .+| |+|....   |+++.+.+++++|.+++   ++++++.+++.  .......   +     .. +.  +. ++.+.. 
T Consensus        41 ~~i-wih~~s~---G~~~~~~~L~~~L~~~~---~v~v~~~~~~~--~~~~~~~---~-----~~-v~~~~~-~p~~~~-  100 (374)
T 2xci_A           41 GAL-WVHTASI---GEFNTFLPILKELKREH---RILLTYFSPRA--REYLKTK---S-----DF-YDCLHP-LPLDNP-  100 (374)
T ss_dssp             TCE-EEECSSH---HHHHHHHHHHHHHHHHS---CEEEEESCGGG--HHHHHTT---G-----GG-CSEEEE-CCCSSH-
T ss_pred             CCE-EEEcCCH---HHHHHHHHHHHHHHhcC---CEEEEEcCCcH--HHHHHHh---c-----cc-ccceeE-CCCCCH-
Confidence            455 4554433   67899999999999985   66666655322  2112111   1     11 22  22 333211 


Q ss_pred             eccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEe--cCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYID--TMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~--~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                                        ..+.+++++++||+++.  ++.|++.+..+   .+ |++...+.                  
T Consensus       101 ------------------~~l~~~l~~~~pDiv~~~~~~~~~~~~~~~---~~-p~~~~~~~------------------  140 (374)
T 2xci_A          101 ------------------FSVKRFEELSKPKALIVVEREFWPSLIIFT---KV-PKILVNAY------------------  140 (374)
T ss_dssp             ------------------HHHHHHHHHHCCSEEEEESCCCCHHHHHHC---CS-CEEEEEEC------------------
T ss_pred             ------------------HHHHHHHHHhCCCEEEEECccCcHHHHHHH---hC-CEEEEEee------------------
Confidence                              33667888999998874  45566654332   22 66543221                  


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccCCCCCC
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKITHSKTD  287 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~~~~~~  287 (488)
                                 .+...         +.+.+++.+|.++++|+.+++.+.+. +.+ ++.+++|+ ++.... + ...  -
T Consensus       141 -----------~~~~~---------~~~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~~-~-~~~--l  194 (374)
T 2xci_A          141 -----------AKGSL---------IEKILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQKG-K-GIK--L  194 (374)
T ss_dssp             -----------CCCCH---------HHHHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCCC-S-CCC--C
T ss_pred             -----------cCchH---------HHHHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCcC-h-hhh--h
Confidence                       01100         33456788999999999999999985 555 89999987 222111 1 111  1


Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC--------CcE
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE--------NNV  359 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~--------~~v  359 (488)
                      +.++++++|+  ..||++.+++|++.+.++.     |+++|+|+|+||     ++.++++++++++|+.        ++|
T Consensus       195 ~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~-----p~~~lvivG~g~-----~~~~~l~~~~~~~gl~~~~~~~~~~~v  262 (374)
T 2xci_A          195 KGEFIVAGSI--HTGEVEIILKAFKEIKKTY-----SSLKLILVPRHI-----ENAKIFEKKARDFGFKTSFFENLEGDV  262 (374)
T ss_dssp             SSCEEEEEEE--CGGGHHHHHHHHHHHHTTC-----TTCEEEEEESSG-----GGHHHHHHHHHHTTCCEEETTCCCSSE
T ss_pred             cCCEEEEEeC--CCchHHHHHHHHHHHHhhC-----CCcEEEEECCCH-----HHHHHHHHHHHHCCCceEEecCCCCcE
Confidence            2356777775  4689999999999998877     899999999987     5556899999998876        468


Q ss_pred             EEecCCChHHHHHHHHhCcEEEEcC-CCCcCCccHHHHHHcCCcEEEeCC-CCCccceeccCCCccccceecCCHHHHHH
Q psy15555        360 EFKVNLPYEDMKKEFSEGLIGLHAM-WNEHFGIGIVECMAAGLIMIAHKS-GGPKMDIVIEDPETCRNGFLACDEVEYAQ  437 (488)
Q Consensus       360 ~~~g~~~~~el~~~~~~ad~~v~~s-~~e~~g~~~lEa~a~G~PvI~~~~-~~~~~eiv~~~~~~~~~g~~~~~~~~l~~  437 (488)
                      .+.|..  +|+..+|+.||+++.+| ..|.+|++++||||+|+|||+++. ++.. |++++. .+.+.++.+.|+++|++
T Consensus       263 ~~~~~~--~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~-e~~~~~-~~~G~l~~~~d~~~La~  338 (374)
T 2xci_A          263 ILVDRF--GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVN-DLKEFL-EKEGAGFEVKNETELVT  338 (374)
T ss_dssp             EECCSS--SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSH-HHHHHH-HHTTCEEECCSHHHHHH
T ss_pred             EEECCH--HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChH-HHHHHH-HHCCCEEEeCCHHHHHH
Confidence            888877  89999999999876665 557889999999999999998744 5554 766542 00123444569999999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHHh
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSVD  462 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~~  462 (488)
                      +|.++++ | +.+++|+++|++.++
T Consensus       339 ai~~ll~-d-~~r~~mg~~ar~~~~  361 (374)
T 2xci_A          339 KLTELLS-V-KKEIKVEEKSREIKG  361 (374)
T ss_dssp             HHHHHHH-S-CCCCCHHHHHHHHHH
T ss_pred             HHHHHHh-H-HHHHHHHHHHHHHHH
Confidence            9999999 9 999999999998883

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=99.97  E-value=1.7e-29  Score=245.22  Aligned_cols=277  Identities=11%  Similarity=0.044  Sum_probs=198.6

Q ss_pred             HHHHHHhhhcCCcEEEecCC-ccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMG-YAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~-~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+++++.+||+||.+.. ++.... .+....++|++...|... .                     .+. ...... 
T Consensus        85 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~-~---------------------~~~-~~~~~~-  140 (375)
T 3beo_A           85 EGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR-T---------------------WDK-YSPYPE-  140 (375)
T ss_dssp             HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC-C---------------------SCT-TSSTTH-
T ss_pred             HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-c---------------------ccc-cCCChh-
Confidence            44667888999999987543 333322 333366889876444210 0                     000 000000 


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC-C------CCCCCCeEEEEeecc
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT-H------SKTDGPVKIISVAQF  298 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~-~------~~~~~~~~i~~~g~~  298 (488)
                        ..   ..+.+.+.+|.++++|+..++.+.+.+..++++.+++|+ +|...+.+.. .      ...+++.+++++|++
T Consensus       141 --~~---~~~~~~~~~d~ii~~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~  215 (375)
T 3beo_A          141 --EM---NRQLTGVMADLHFSPTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRR  215 (375)
T ss_dssp             --HH---HHHHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCG
T ss_pred             --Hh---hhhHHhhhhheeeCCCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEeccc
Confidence              11   111123458999999999999998854334589999999 7766554321 0      112345577899998


Q ss_pred             CCC-CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC
Q psy15555        299 RPE-KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG  377 (488)
Q Consensus       299 ~~~-k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a  377 (488)
                      .+. ||++.+++|++.+.++.     |+++++ +|.|+..   +..+.+++++   +..++|+|.|.++..++..+|+.|
T Consensus       216 ~~~~K~~~~li~a~~~l~~~~-----~~~~~i-~~~g~~~---~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~a  283 (375)
T 3beo_A          216 ENLGEPMRNMFRAIKRLVDKH-----EDVQVV-YPVHMNP---VVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARS  283 (375)
T ss_dssp             GGTTHHHHHHHHHHHHHHHHC-----TTEEEE-EECCSCH---HHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTC
T ss_pred             ccchhHHHHHHHHHHHHHhhC-----CCeEEE-EeCCCCH---HHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhC
Confidence            875 99999999999998876     788855 4766521   2334444443   223689999999989999999999


Q ss_pred             cEEEEcCCCCcCCccHHHHHHcCCcEEEeCC-CCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHH
Q psy15555        378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKS-GGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQ  455 (488)
Q Consensus       378 d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~  455 (488)
                      |++|.+|     |..++|||++|+|||+++. ++.. |+++++     +|++++ |+++++++|.++++ |++.+++|++
T Consensus       284 d~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-----~g~~v~~d~~~la~~i~~ll~-~~~~~~~~~~  351 (375)
T 3beo_A          284 YLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-----TLKLAGTDEETIFSLADELLS-DKEAHDKMSK  351 (375)
T ss_dssp             SEEEECC-----HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-----SEEECCSCHHHHHHHHHHHHH-CHHHHHHHCC
T ss_pred             cEEEECC-----CChHHHHHhcCCCEEEecCCCCCc-eeecCC-----ceEEcCCCHHHHHHHHHHHHh-ChHhHhhhhh
Confidence            9999998     4559999999999999965 7765 887654     799885 99999999999999 9999999999


Q ss_pred             HHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        456 NAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       456 ~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      ++++..+.|+|+.+++.+.++++
T Consensus       352 ~~~~~~~~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          352 ASNPYGDGRASERIVEAILKHFN  374 (375)
T ss_dssp             CCCTTCCSCHHHHHHHHHHHHTT
T ss_pred             cCCCCCCCcHHHHHHHHHHHHhh
Confidence            98877788999999998887653

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=99.96  E-value=7.4e-29  Score=241.51  Aligned_cols=355  Identities=10%  Similarity=0.015  Sum_probs=231.3

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCC-CeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYP-DYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      |||+++.....    +...+.+++++|.++++ ++.++++ +..........+.    +++...      ..++...   
T Consensus         1 mkIl~v~~~~~----~~~~~~~l~~~L~~~g~~~~~v~~~-~~~~~~~~~~~~~----~~~~~~------~~~~~~~---   62 (384)
T 1vgv_A            1 MKVLTVFGTRP----EAIKMAPLVHALAKDPFFEAKVCVT-AQHREMLDQVLKL----FSIVPD------YDLNIMQ---   62 (384)
T ss_dssp             CEEEEEECSHH----HHHHHHHHHHHHHHSTTCEEEEEEC-CSSGGGGHHHHHH----HTCCCS------EECCCCS---
T ss_pred             CeEEEEecccH----HHHHHHHHHHHHHhCCCCceEEEEc-CCCHHHHHHHHHH----cCCCCC------cceecCC---
Confidence            78988754321    22456789999999875 6666554 3322222222222    111000      1111111   


Q ss_pred             ccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCC-ccchh-hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhccc
Q psy15555        132 ASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMG-YAFTY-PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHN  209 (488)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~-~~~~~-~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~  209 (488)
                      .. .....   ........+.+++++.+||+||.+.. ..... .++....++|++.+.|.... .              
T Consensus        63 ~~-~~~~~---~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~-~--------------  123 (384)
T 1vgv_A           63 PG-QGLTE---ITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT-G--------------  123 (384)
T ss_dssp             TT-SCHHH---HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC-S--------------
T ss_pred             CC-ccHHH---HHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc-c--------------
Confidence            00 01111   01222355677888999999987653 22221 12333668898876653210 0              


Q ss_pred             CccccccCccchhhhHHHHHHHHHHHHH-HhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-Cchhhhcc------
Q psy15555        210 NSQRVANNPILTSFKLFYYKVFALLYSH-VGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKI------  281 (488)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~------  281 (488)
                             . ........       ..+. +.+.+|.++++|+..++.+.+.+..+.++.+++|++ |...+.+.      
T Consensus       124 -------~-~~~~~~~~-------~~~~~~~~~~d~ii~~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~  188 (384)
T 1vgv_A          124 -------D-LYSPWPEE-------ANRTLTGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSD  188 (384)
T ss_dssp             -------C-TTSSTTHH-------HHHHHHHTTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCH
T ss_pred             -------c-ccCCCchH-------hhHHHHHhhccEEEcCcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccch
Confidence                   0 00000000       1111 245699999999999999987543345799999984 43222111      


Q ss_pred             ------CCC---C-CCCCeEEEEeeccCCC-CChHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHHH
Q psy15555        282 ------THS---K-TDGPVKIISVAQFRPE-KDHPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQDL  349 (488)
Q Consensus       282 ------~~~---~-~~~~~~i~~~g~~~~~-k~~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~  349 (488)
                            ...   . .+++.+++++|++.+. ||++.+++|+..+.++.     |+++++++ |.++     +..+++++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~-----~~~~l~i~~g~~~-----~~~~~l~~~  258 (384)
T 1vgv_A          189 KLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTH-----QDIQIVYPVHLNP-----NVREPVNRI  258 (384)
T ss_dssp             HHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHC-----TTEEEEEECCBCH-----HHHHHHHHH
T ss_pred             hhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhC-----CCeEEEEEcCCCH-----HHHHHHHHH
Confidence                  111   1 2234578899999876 89999999999998877     78998885 3332     334556555


Q ss_pred             HHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC-CCCccceeccCCCcccccee
Q psy15555        350 CKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS-GGPKMDIVIEDPETCRNGFL  428 (488)
Q Consensus       350 ~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-~~~~~eiv~~~~~~~~~g~~  428 (488)
                      +..   .++|.+.|.++.+++..+|+.||++|++|     |..++|||++|+|||+++. ++.. ++++++     +|++
T Consensus       259 ~~~---~~~v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-----~g~l  324 (384)
T 1vgv_A          259 LGH---VKNVILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-----TVRL  324 (384)
T ss_dssp             HTT---CTTEEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-----SEEE
T ss_pred             hhc---CCCEEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-----ceEE
Confidence            432   36899999998899999999999999998     3348999999999999987 6665 787654     7888


Q ss_pred             cC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        429 AC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       429 ~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      ++ |+++++++|.++++ |++.+++|++++++..+.|+|+++++.+.++++++.+..
T Consensus       325 v~~d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  380 (384)
T 1vgv_A          325 VGTDKQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGSHH  380 (384)
T ss_dssp             ECSSHHHHHHHHHHHHH-CHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC----
T ss_pred             eCCCHHHHHHHHHHHHh-ChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcccc
Confidence            86 99999999999999 999999999998877788999999999998888776544

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.96  E-value=1.1e-26  Score=229.42  Aligned_cols=285  Identities=12%  Similarity=0.152  Sum_probs=204.1

Q ss_pred             CCcEEEecCCccchhhhh-hh-hCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHH
Q psy15555        159 QPDIYIDTMGYAFTYPLF-SY-IGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYS  236 (488)
Q Consensus       159 ~pDiii~~~~~~~~~~~~-~~-~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (488)
                      .+|+|+.+......++.. +. ..+.|+++++|.|+...+...                   .....    ..    +.+
T Consensus       123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~~~~~-------------------~lp~~----~~----il~  175 (482)
T 1uqt_A          123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFN-------------------ALPTY----DT----LLE  175 (482)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHT-------------------TSTTH----HH----HHH
T ss_pred             CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCHHHHh-------------------hCccH----HH----HHH
Confidence            458998776544444433 32 337899999998864322110                   00000    00    111


Q ss_pred             HHhcccCEEEEcChhHHHHHHHH-----------------hccCCceEEEcCCCCchhhhccCCC-----------CCCC
Q psy15555        237 HVGKYSDIIMVNSSWTEEHVIQL-----------------WNCQLKTYKLYPPCDTEDLKKITHS-----------KTDG  288 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~~~~~~~~-----------------~~~~~k~~vi~~~~d~~~~~~~~~~-----------~~~~  288 (488)
                       .+-.+|.+..++....+.+...                 ++...++.++|||+|.+.|.+....           ..++
T Consensus       176 -~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~  254 (482)
T 1uqt_A          176 -QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKN  254 (482)
T ss_dssp             -HHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTT
T ss_pred             -hhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCC
Confidence             1235688888887776666531                 1223478999999998877543110           0136


Q ss_pred             CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcH---HHHHHHHHHHHhcC----CC--CcE
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDE---VCVKDMQDLCKHLS----LE--NNV  359 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~---~~~~~l~~~~~~~~----l~--~~v  359 (488)
                      +++++++||+.+.||++.+++|++++.+++++ ...+++|+++|.....+.+   +..+++++++.+.+    ..  ..|
T Consensus       255 ~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~-~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v  333 (482)
T 1uqt_A          255 VQNIFSVERLDYSKGLPERFLAYEALLEKYPQ-HHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPL  333 (482)
T ss_dssp             CEEEEEECCBCGGGCHHHHHHHHHHHHHHCGG-GTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSE
T ss_pred             CEEEEEEeCCcccCCHHHHHHHHHHHHHhCcc-ccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceE
Confidence            78999999999999999999999999887621 0014789999964322222   23455566554432    11  135


Q ss_pred             E-EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-----cEEEeCCCCCccceeccCCCccccceecC--C
Q psy15555        360 E-FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-----IMIAHKSGGPKMDIVIEDPETCRNGFLAC--D  431 (488)
Q Consensus       360 ~-~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-----PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~  431 (488)
                      + +.|.++.+|+..+|+.||+|+.||..|+||++++||||||+     |+|+++.+|.. +.+.       +|++++  |
T Consensus       334 ~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~-~~l~-------~g~lv~p~d  405 (482)
T 1uqt_A          334 YYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT-------SALIVNPYD  405 (482)
T ss_dssp             EEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTCT-------TSEEECTTC
T ss_pred             EEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH-HHhC-------CeEEECCCC
Confidence            5 56889999999999999999999999999999999999997     99999988776 4442       378876  9


Q ss_pred             HHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHh
Q psy15555        432 EVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       432 ~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~  480 (488)
                      +++++++|.+++++++++++++++++++.+.+||++.+++++++.++++
T Consensus       406 ~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~  454 (482)
T 1uqt_A          406 RDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI  454 (482)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence            9999999999998567889999999999998899999999999999876

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.95  E-value=8e-27  Score=198.85  Aligned_cols=163  Identities=18%  Similarity=0.306  Sum_probs=138.6

Q ss_pred             CeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChH
Q psy15555        289 PVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYE  368 (488)
Q Consensus       289 ~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~  368 (488)
                      +++++|+|++.+.||++.+++|+..+++ .     ++++|+++|.++..      ++++++++++++  ++.+ |+++.+
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~-----~~~~l~i~G~g~~~------~~~~~~~~~~~~--~v~~-g~~~~~   66 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKY-K-----QDIVLLLKGKGPDE------KKIKLLAQKLGV--KAEF-GFVNSN   66 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTT-G-----GGEEEEEECCSTTH------HHHHHHHHHHTC--EEEC-CCCCHH
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhcc-C-----CCeEEEEEeCCccH------HHHHHHHHHcCC--eEEE-eecCHH
Confidence            5789999999999999999999999853 3     79999999998643      788889998886  7888 999999


Q ss_pred             HHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCC-cEEEeC-CCCCccceeccCCCccccceecCCHHHHHHHHHHHHccC
Q psy15555        369 DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGL-IMIAHK-SGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLS  446 (488)
Q Consensus       369 el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~-PvI~~~-~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~  446 (488)
                      ++..+|+.||++++||..|++|++++|||++|+ |||+++ .++.. +++.++    .+.+...|+++++++|.++++ +
T Consensus        67 ~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~----~~~~~~~~~~~l~~~i~~l~~-~  140 (166)
T 3qhp_A           67 ELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR-QFALDE----RSLFEPNNAKDLSAKIDWWLE-N  140 (166)
T ss_dssp             HHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSG----GGEECTTCHHHHHHHHHHHHH-C
T ss_pred             HHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCC----ceEEcCCCHHHHHHHHHHHHh-C
Confidence            999999999999999999999999999999998 999954 56664 888776    443334499999999999999 9


Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHH
Q psy15555        447 QDTKTRISQNAVSSVDRFSMEEFKNG  472 (488)
Q Consensus       447 ~~~~~~~~~~a~~~~~~~s~~~~~~~  472 (488)
                      ++.++++++++++.+++|||+.++++
T Consensus       141 ~~~~~~~~~~~~~~~~~~s~~~~~~~  166 (166)
T 3qhp_A          141 KLERERMQNEYAKSALNYTLENSVIQ  166 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHHHHHHHCChhhhhcC
Confidence            99999999999998899999998764

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.94  E-value=1.1e-25  Score=222.58  Aligned_cols=316  Identities=10%  Similarity=0.027  Sum_probs=207.5

Q ss_pred             cCCcEEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccc-cCccchhhhH--HHHHHHH
Q psy15555        158 FQPDIYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVA-NNPILTSFKL--FYYKVFA  232 (488)
Q Consensus       158 ~~pDiii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~  232 (488)
                      .+|||+|.+.......+.. + ...++++++++|....    -.++.. +   ++..... ...+......  .......
T Consensus       180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~tel----GR~lag-q---g~~~~y~~L~~~~~d~ea~~~~i~~~~  251 (725)
T 3nb0_A          180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLL----GRYLCA-S---GSFDFYNCLESVDVDHEAGRFGIYHRY  251 (725)
T ss_dssp             SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHH----HHHHTS-S---SCSCHHHHGGGCCHHHHHHHTTCHHHH
T ss_pred             CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchh----hhhhhh-c---CCCchhhhhhhcCCChhhhhhchhHHH
Confidence            5689999887544444332 2 2447999999997531    010000 0   0000000 0000000000  0001223


Q ss_pred             HHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC------------------------CCC-C
Q psy15555        233 LLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH------------------------SKT-D  287 (488)
Q Consensus       233 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~------------------------~~~-~  287 (488)
                      .+++.....||.|+++|+.+++.+..+++.+.+.. |+||+|.+.+.+...                        ... +
T Consensus       252 ~~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i-IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d  330 (725)
T 3nb0_A          252 CIERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI-LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD  330 (725)
T ss_dssp             HHHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE-CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred             HHHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE-EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence            45677888999999999999999999877665544 999999888765310                        111 3


Q ss_pred             CCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhh--hccCceEEEEEecCCCCCcHH-----------------------
Q psy15555        288 GPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISE--ELWDNLKLIFIGSTRNEEDEV-----------------------  341 (488)
Q Consensus       288 ~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~--~~~~~~~l~ivG~~~~~~~~~-----------------------  341 (488)
                      +.+++..+||++ .+||++.+++|+.++......  ....-+.|+|++.+....+.+                       
T Consensus       331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~  410 (725)
T 3nb0_A          331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG  410 (725)
T ss_dssp             GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence            345566689999 689999999999999865211  112347888888764331100                       


Q ss_pred             ------------------------------------------------------------HHHHHHHHHHhcCCCCc---
Q psy15555        342 ------------------------------------------------------------CVKDMQDLCKHLSLENN---  358 (488)
Q Consensus       342 ------------------------------------------------------------~~~~l~~~~~~~~l~~~---  358 (488)
                                                                                  .-+.+...++.+++.+.   
T Consensus       411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d  490 (725)
T 3nb0_A          411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD  490 (725)
T ss_dssp             HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred             HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence                                                                        00122223334444343   


Q ss_pred             ---EEEe-cCCChH------HHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCc----cc
Q psy15555        359 ---VEFK-VNLPYE------DMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPET----CR  424 (488)
Q Consensus       359 ---v~~~-g~~~~~------el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~----~~  424 (488)
                         |+|+ ++++..      ++..+|+.||+||+||..|+||++++||||||+|||+++.+|.. +.+.++ ..    ..
T Consensus       491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg-~~~~~~~~  568 (725)
T 3nb0_A          491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFG-SYMEDL-IETNQAKD  568 (725)
T ss_dssp             SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTT-SCHHHHHH
T ss_pred             ceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChh-hhhhcc-ccccCCCC
Confidence               5555 455554      58999999999999999999999999999999999999999987 777664 11    13


Q ss_pred             cceecC-----CHHH----HHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        425 NGFLAC-----DEVE----YAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       425 ~g~~~~-----~~~~----l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      +|+++.     |+++    |+++|..++..+++.+.++++++++.+++|||+.+++++.++|+.++.+.
T Consensus       569 tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~~  637 (725)
T 3nb0_A          569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRRG  637 (725)
T ss_dssp             TTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence            687662     4554    45555555544788899999999888899999999999999999988643

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.94  E-value=2.3e-24  Score=209.89  Aligned_cols=283  Identities=10%  Similarity=0.047  Sum_probs=210.0

Q ss_pred             CcEEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHH
Q psy15555        160 PDIYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSH  237 (488)
Q Consensus       160 pDiii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (488)
                      -|+|..+......+|.. + ...+.++.+++|.|+...++...+..                     .+...++     .
T Consensus       150 ~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~---------------------~~r~ell-----~  203 (496)
T 3t5t_A          150 DPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK---------------------EIRTGIL-----H  203 (496)
T ss_dssp             SCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCH---------------------HHHHHHH-----H
T ss_pred             CCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcH---------------------hHHHHHH-----H
Confidence            45776666555555533 2 23578999999999865544321110                     0001111     2


Q ss_pred             HhcccCEEEEcChhHHHHHHHH----h-c--------------cCCceEEEcCCCCchhhhccCCC-------CCCCCeE
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQL----W-N--------------CQLKTYKLYPPCDTEDLKKITHS-------KTDGPVK  291 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~----~-~--------------~~~k~~vi~~~~d~~~~~~~~~~-------~~~~~~~  291 (488)
                      .+-.+|.|.+++...++.|.+.    . +              ...++.++|+|+|.+.|.+....       ..+++++
T Consensus       204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~l  283 (496)
T 3t5t_A          204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRL  283 (496)
T ss_dssp             HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEE
T ss_pred             HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceE
Confidence            3457899999999998887652    2 2              11267889999999988765321       0136789


Q ss_pred             EEEeeccCCCCChHHHHHHHHHhHHhhhhhccCc---eEEEEEecCCCCCcH---HHHHHHHHHHHhc----CCCCcEEE
Q psy15555        292 IISVAQFRPEKDHPLQLRAMYQLRQIISEELWDN---LKLIFIGSTRNEEDE---VCVKDMQDLCKHL----SLENNVEF  361 (488)
Q Consensus       292 i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~---~~l~ivG~~~~~~~~---~~~~~l~~~~~~~----~l~~~v~~  361 (488)
                      ++++||+.+.||+..+++|+ ++.+++     |+   +.|+++|.....+.+   +..+++++++.+.    |.. .|+|
T Consensus       284 Il~VgRLd~~KGi~~lL~Af-~ll~~~-----P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f  356 (496)
T 3t5t_A          284 VVHSGRTDPIKNAERAVRAF-VLAARG-----GGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRI  356 (496)
T ss_dssp             EEEEEESSGGGCHHHHHHHH-HHHHHT-----SSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEE
T ss_pred             EEEcccCccccCHHHHHHHH-HHHHhC-----cccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEE
Confidence            99999999999999999999 888887     54   568888743222222   3334555555543    222 6999


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcC---CcEEEeCCCCCccceeccCCCccccceecC--CHHHHH
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAG---LIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYA  436 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G---~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~  436 (488)
                      +|.++.+|+..+|+.||+++.||..|+||++++||||||   .|+|.|..+|.. +.+.      .+|++++  |+++++
T Consensus       357 ~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l~------~~allVnP~D~~~lA  429 (496)
T 3t5t_A          357 DNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAA-EVLG------EYCRSVNPFDLVEQA  429 (496)
T ss_dssp             EECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHHG------GGSEEECTTBHHHHH
T ss_pred             eCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHhC------CCEEEECCCCHHHHH
Confidence            999999999999999999999999999999999999997   899999998887 5553      3488886  999999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      ++|.+++++++++++++.++.++.+.+++.+..++.+++.++....
T Consensus       430 ~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~  475 (496)
T 3t5t_A          430 EAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHA  475 (496)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhccc
Confidence            9999999977899999999999999999999999999998887644

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.94  E-value=1.1e-24  Score=211.47  Aligned_cols=276  Identities=11%  Similarity=0.050  Sum_probs=192.1

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ..+.+++++.+||+||.+......++  .+....++|++ +.|.....+                      ........ 
T Consensus        81 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~----------------------~~~~~~~~-  136 (376)
T 1v4v_A           81 PQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSG----------------------NLKEPFPE-  136 (376)
T ss_dssp             HHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCS----------------------CTTSSTTH-
T ss_pred             HHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccc----------------------cccCCCch-
Confidence            44667888999999987654332222  33346688975 343322100                      00000000 


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCC-Cchhhhcc----CCCCCCCCeEEEEeeccCCC
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPC-DTEDLKKI----THSKTDGPVKIISVAQFRPE  301 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~-d~~~~~~~----~~~~~~~~~~i~~~g~~~~~  301 (488)
                        ..   ..+.+.+.+|.++++|+..++.+.+.+..++++.+++|+. |...+...    .....+++++++++||+...
T Consensus       137 --~~---~~~~~~~~~~~~~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~  211 (376)
T 1v4v_A          137 --EA---NRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENW  211 (376)
T ss_dssp             --HH---HHHHHHHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGG
T ss_pred             --HH---HHHHHHHHhceeeCCCHHHHHHHHHcCCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccch
Confidence              01   1122335589999999999999988644445888999974 43222111    11122345677889998777


Q ss_pred             CChHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEE
Q psy15555        302 KDHPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIG  380 (488)
Q Consensus       302 k~~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~  380 (488)
                      |+++.+++|++.+.++.     |+++++++ |.++     +..+++++++..   .++|.+.|.++..++..+|+.||++
T Consensus       212 k~~~~ll~a~~~l~~~~-----~~~~lv~~~g~~~-----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~ad~~  278 (376)
T 1v4v_A          212 PLLSDLAQALKRVAEAF-----PHLTFVYPVHLNP-----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRASLLL  278 (376)
T ss_dssp             GGHHHHHHHHHHHHHHC-----TTSEEEEECCSCH-----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTEEEE
T ss_pred             HHHHHHHHHHHHHHhhC-----CCeEEEEECCCCH-----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhCcEE
Confidence            89999999999998876     78888876 6442     233566665532   3589999998888999999999999


Q ss_pred             EEcCCCCcCCccHHHHHHcCCcEEEeCC-CCCccceeccCCCccccceec-CCHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy15555        381 LHAMWNEHFGIGIVECMAAGLIMIAHKS-GGPKMDIVIEDPETCRNGFLA-CDEVEYAQTIKLILHLSQDTKTRISQNAV  458 (488)
Q Consensus       381 v~~s~~e~~g~~~lEa~a~G~PvI~~~~-~~~~~eiv~~~~~~~~~g~~~-~~~~~l~~~i~~ll~~~~~~~~~~~~~a~  458 (488)
                      |++|    +|+ ++|||++|+|||+++. ++.. +++++     ++|+++ .|+++++++|.++++ |++.+++|++++ 
T Consensus       279 v~~S----~g~-~lEA~a~G~PvI~~~~~~~~~-~~~~~-----g~g~lv~~d~~~la~~i~~ll~-d~~~~~~~~~~~-  345 (376)
T 1v4v_A          279 VTDS----GGL-QEEGAALGVPVVVLRNVTERP-EGLKA-----GILKLAGTDPEGVYRVVKGLLE-NPEELSRMRKAK-  345 (376)
T ss_dssp             EESC----HHH-HHHHHHTTCCEEECSSSCSCH-HHHHH-----TSEEECCSCHHHHHHHHHHHHT-CHHHHHHHHHSC-
T ss_pred             EECC----cCH-HHHHHHcCCCEEeccCCCcch-hhhcC-----CceEECCCCHHHHHHHHHHHHh-ChHhhhhhcccC-
Confidence            9998    355 8899999999999854 6654 77654     478888 599999999999999 999999998744 


Q ss_pred             HHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        459 SSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       459 ~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                         +.|++...++++.+.+++++.
T Consensus       346 ---~~~~~~~~~~~i~~~i~~~~~  366 (376)
T 1v4v_A          346 ---NPYGDGKAGLMVARGVAWRLG  366 (376)
T ss_dssp             ---CSSCCSCHHHHHHHHHHHHTT
T ss_pred             ---CCCCCChHHHHHHHHHHHHhc
Confidence               567777777888888877765

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.93  E-value=3.7e-25  Score=194.64  Aligned_cols=179  Identities=23%  Similarity=0.272  Sum_probs=152.9

Q ss_pred             EcCCCCchhhh--ccCC------------CCCCCCeEEEEeeccC-CCCChHHHHHHHHHhH--HhhhhhccCceEEEEE
Q psy15555        269 LYPPCDTEDLK--KITH------------SKTDGPVKIISVAQFR-PEKDHPLQLRAMYQLR--QIISEELWDNLKLIFI  331 (488)
Q Consensus       269 i~~~~d~~~~~--~~~~------------~~~~~~~~i~~~g~~~-~~k~~~~ll~a~~~l~--~~~~~~~~~~~~l~iv  331 (488)
                      +|||+|.+.+.  +...            ....+.++++++|++. +.||++.++++++.+.  ++.     ++++|+|+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~-----~~~~l~i~   76 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF-----QEMRFIII   76 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG-----GGEEEEEE
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccC-----CCeEEEEE
Confidence            68899988877  4421            0113556999999999 9999999999999997  666     79999999


Q ss_pred             ecCCCCCcHHHHHHHHHHHHhcCCCCcEEE-ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC
Q psy15555        332 GSTRNEEDEVCVKDMQDLCKHLSLENNVEF-KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG  410 (488)
Q Consensus       332 G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~-~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~  410 (488)
                      |.++    ++..+++++.+++++   +|++ +|+++.+++..+|+.||+++.||..|++|++++|||++|+|||+++.++
T Consensus        77 G~~~----~~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~  149 (200)
T 2bfw_A           77 GKGD----PELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG  149 (200)
T ss_dssp             CCBC----HHHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHH
T ss_pred             CCCC----hHHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCC
Confidence            9875    135588888888876   8999 9999999999999999999999999999999999999999999999988


Q ss_pred             CccceeccCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcC
Q psy15555        411 PKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFS  465 (488)
Q Consensus       411 ~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s  465 (488)
                      .. +++ ++    .+|++++  |+++++++|.+++++|++.++++++++++.+++||
T Consensus       150 ~~-e~~-~~----~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~fs  200 (200)
T 2bfw_A          150 LR-DII-TN----ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS  200 (200)
T ss_dssp             HH-HHC-CT----TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred             hH-HHc-CC----CceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Confidence            86 888 77    7899987  99999999999997689999999999999884475

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.91  E-value=2.2e-24  Score=185.56  Aligned_cols=152  Identities=26%  Similarity=0.316  Sum_probs=133.3

Q ss_pred             CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHH--hcCCCCcEEEe
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCK--HLSLENNVEFK  362 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~--~~~l~~~v~~~  362 (488)
                      .+.++++++|+|++.+.||++.+++|++.+         ++++|+++|.++..      +++++.++  +.++.++|.+.
T Consensus        19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l---------~~~~l~i~G~~~~~------~~l~~~~~~~~~~l~~~v~~~   83 (177)
T 2f9f_A           19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL---------QDEKLYIVGWFSKG------DHAERYARKIMKIAPDNVKFL   83 (177)
T ss_dssp             CCCCCSCEEEECCSSGGGTHHHHHHHHHHC---------TTSCEEEEBCCCTT------STHHHHHHHHHHHSCTTEEEE
T ss_pred             cCCCCCEEEEEeccccccCHHHHHHHHHhC---------CCcEEEEEecCccH------HHHHHHHHhhhcccCCcEEEe
Confidence            446778999999999999999999999887         57899999998754      56777777  77888899999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec-CCHHHHHHHHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA-CDEVEYAQTIKL  441 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~-~~~~~l~~~i~~  441 (488)
                      |+++++|+..+|+.||+++.||..|++|++++|||++|+|||+++.++.. +++.++    .+|+++ .|+++++++|.+
T Consensus        84 g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~----~~g~~~~~d~~~l~~~i~~  158 (177)
T 2f9f_A           84 GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINE----KTGYLVNADVNEIIDAMKK  158 (177)
T ss_dssp             ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBT----TTEEEECSCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCC----CccEEeCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998876 888877    789886 599999999999


Q ss_pred             HHccCHHH-HHHHHHHH
Q psy15555        442 ILHLSQDT-KTRISQNA  457 (488)
Q Consensus       442 ll~~~~~~-~~~~~~~a  457 (488)
                      +++ |++. ++++++++
T Consensus       159 l~~-~~~~~~~~~~~~a  174 (177)
T 2f9f_A          159 VSK-NPDKFKKDCFRRA  174 (177)
T ss_dssp             HHH-CTTTTHHHHHHHH
T ss_pred             HHh-CHHHHHHHHHHHH
Confidence            998 7765 45554444

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.88  E-value=1.1e-21  Score=190.37  Aligned_cols=346  Identities=12%  Similarity=0.045  Sum_probs=213.0

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEE-EEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIY-IYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV  130 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  130 (488)
                      .|||+++...-+    +...+.+++++|+++ +++++. +.|+.+-    +..+.....|++..  . .   .+...   
T Consensus        25 m~ki~~v~Gtr~----~~~~~a~li~~l~~~-~~~~~~~~~tG~h~----~~~~~~~~~~~i~~--~-~---~l~~~---   86 (396)
T 3dzc_A           25 MKKVLIVFGTRP----EAIKMAPLVQQLCQD-NRFVAKVCVTGQHR----EMLDQVLELFSITP--D-F---DLNIM---   86 (396)
T ss_dssp             CEEEEEEECSHH----HHHHHHHHHHHHHHC-TTEEEEEEECCSSS----HHHHHHHHHTTCCC--S-E---ECCCC---
T ss_pred             CCeEEEEEeccH----hHHHHHHHHHHHHhC-CCCcEEEEEecccH----HHHHHHHHhcCCCC--c-e---eeecC---
Confidence            468998764432    224567899999885 577775 4454432    11222212343311  1 1   11110   


Q ss_pred             eccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcc
Q psy15555        131 EASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVITH  208 (488)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~  208 (488)
                       ........   .....+..+.+++++++||+|+........++  .+....++|++. ++.+..+++.           
T Consensus        87 -~~~~~~~~---~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~-----------  150 (396)
T 3dzc_A           87 -EPGQTLNG---VTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNI-----------  150 (396)
T ss_dssp             -CTTCCHHH---HHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCT-----------
T ss_pred             -CCCCCHHH---HHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccc-----------
Confidence             00011111   12333456778899999999887654444333  333467899653 3322211100           


Q ss_pred             cCccccccCccchhhhHHHHHHHHHHHHH-HhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhcc-----
Q psy15555        209 NNSQRVANNPILTSFKLFYYKVFALLYSH-VGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKI-----  281 (488)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~-----  281 (488)
                                 .......       ..+. +.+.+|.++++|+..++++.+.+..++++.+++|+ +|...+...     
T Consensus       151 -----------~~~~~~~-------~~r~~~~~~a~~~~~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~  212 (396)
T 3dzc_A          151 -----------YSPWPEE-------GNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTD  212 (396)
T ss_dssp             -----------TSSTTHH-------HHHHHHHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHC
T ss_pred             -----------ccCCcHH-------HHHHHHHHhcCEEECCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccc
Confidence                       0000010       1111 23568999999999999999865555689999997 443222111     


Q ss_pred             -------CCCC---CCCCe-EEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHH
Q psy15555        282 -------THSK---TDGPV-KIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQD  348 (488)
Q Consensus       282 -------~~~~---~~~~~-~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~  348 (488)
                             ....   ..+++ +++..+|.. ..|+++.+++|++++.++.     |++++++. |.++     +..+.+++
T Consensus       213 ~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~-----~~~~~v~~~g~~~-----~~~~~l~~  282 (396)
T 3dzc_A          213 MDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQH-----PECQILYPVHLNP-----NVREPVNK  282 (396)
T ss_dssp             HHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHC-----TTEEEEEECCBCH-----HHHHHHHH
T ss_pred             hhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhC-----CCceEEEEeCCCh-----HHHHHHHH
Confidence                   0111   12344 444554543 3467899999999998877     78888775 4332     22334443


Q ss_pred             HHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe-CCCCCccceeccCCCccccce
Q psy15555        349 LCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH-KSGGPKMDIVIEDPETCRNGF  427 (488)
Q Consensus       349 ~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~-~~~~~~~eiv~~~~~~~~~g~  427 (488)
                      .   .+..++|.+.+++++.++..+|+.||++|.+|   + |. .+||+++|+|+|++ +.++.. |+++.+     +++
T Consensus       283 ~---~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~~-e~v~~G-----~~~  348 (396)
T 3dzc_A          283 L---LKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI-QEEAPSLGKPVLVMRETTERP-EAVAAG-----TVK  348 (396)
T ss_dssp             H---TTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSCH-HHHHHT-----SEE
T ss_pred             H---HcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcch-HHHHcC-----ceE
Confidence            3   23356899999998889999999999999988   2 33 38999999999998 455553 777665     567


Q ss_pred             ecC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        428 LAC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       428 ~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +++ |++++++++.++++ |++.+++|++++    ..|.....++++.++++
T Consensus       349 lv~~d~~~l~~ai~~ll~-d~~~~~~m~~~~----~~~~~~~aa~ri~~~l~  395 (396)
T 3dzc_A          349 LVGTNQQQICDALSLLLT-DPQAYQAMSQAH----NPYGDGKACQRIADILA  395 (396)
T ss_dssp             ECTTCHHHHHHHHHHHHH-CHHHHHHHHTSC----CTTCCSCHHHHHHHHHH
T ss_pred             EcCCCHHHHHHHHHHHHc-CHHHHHHHhhcc----CCCcCChHHHHHHHHHh
Confidence            776 89999999999999 999999998876    44555566666666553

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.88  E-value=9.2e-22  Score=191.10  Aligned_cols=352  Identities=12%  Similarity=0.071  Sum_probs=212.9

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCC-CeeEE-EEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccce
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYP-DYKIY-IYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKF  129 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~-~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  129 (488)
                      +|||+++...-+    +-..+.+++++|.++ + ++++. +.|+.+.....+..+    .|++..  . .   .+.... 
T Consensus        27 ~~kI~~v~Gtr~----~~~~~a~li~~l~~~-~~~~~~~~~~tG~h~~m~~~~~~----~~~i~~--~-~---~l~v~~-   90 (403)
T 3ot5_A           27 KIKVMSIFGTRP----EAIKMAPLVLALEKE-PETFESTVVITAQHREMLDQVLE----IFDIKP--D-I---DLDIMK-   90 (403)
T ss_dssp             CEEEEEEECSHH----HHHHHHHHHHHHHTC-TTTEEEEEEECC-----CHHHHH----HTTCCC--S-E---ECCCCC-
T ss_pred             cceEEEEEecCh----hHHHHHHHHHHHHhC-CCCCcEEEEEecCcHHHHHHHHH----hcCCCC--C-c---ccccCC-
Confidence            368998764322    223557899999875 4 57755 445543212233332    233311  1 1   111100 


Q ss_pred             eeccCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh--hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhc
Q psy15555        130 VEASLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP--LFSYIGGSKVACYIHYPTITKEMLTRVARRVIT  207 (488)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~--~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~  207 (488)
                         .......   .....+..+.+++++++||+|+........++  .+....++|++ +++.+..+++           
T Consensus        91 ---~~~~~~~---~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~-----------  152 (403)
T 3ot5_A           91 ---KGQTLAE---ITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWN-----------  152 (403)
T ss_dssp             ----CCCHHH---HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSC-----------
T ss_pred             ---CCCCHHH---HHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEE-EEECCccccc-----------
Confidence               0001111   12334456778899999999887654333332  33346789965 3332221110           


Q ss_pred             ccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccCC---
Q psy15555        208 HNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKITH---  283 (488)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~~---  283 (488)
                                ..........+       ..+-+.+|.++++|+..++++.+.+..++++.+++|+ +|...+.....   
T Consensus       153 ----------~~~~~p~~~~r-------~~~~~~a~~~~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~  215 (403)
T 3ot5_A          153 ----------KYSPFPEEMNR-------QLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHH  215 (403)
T ss_dssp             ----------TTSSTTHHHHH-------HHHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCC
T ss_pred             ----------cccCCcHHHHH-------HHHHHhcCEEECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcch
Confidence                      00000001111       1123447999999999999999976555689999986 45433322110   


Q ss_pred             ----CCCCCCeEEEEeeccCC-CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCc
Q psy15555        284 ----SKTDGPVKIISVAQFRP-EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENN  358 (488)
Q Consensus       284 ----~~~~~~~~i~~~g~~~~-~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~  358 (488)
                          ...+++.+++.+||... .|+++.+++|+..+.+++     |++++++.+ |+.   +...+.+++.   .+..++
T Consensus       216 ~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~-----~~~~~v~~~-~~~---~~~~~~l~~~---~~~~~~  283 (403)
T 3ot5_A          216 PILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESR-----EDTELVYPM-HLN---PAVREKAMAI---LGGHER  283 (403)
T ss_dssp             HHHHSCTTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHC-----TTEEEEEEC-CSC---HHHHHHHHHH---HTTCTT
T ss_pred             HHHHhccCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhC-----CCceEEEec-CCC---HHHHHHHHHH---hCCCCC
Confidence                01223345555665432 367899999999998887     788887763 221   1222333333   233468


Q ss_pred             EEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeC-CCCCccceeccCCCccccceecC-CHHHHH
Q psy15555        359 VEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHK-SGGPKMDIVIEDPETCRNGFLAC-DEVEYA  436 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~-~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~  436 (488)
                      |.+.+++++.++..+|+.||++|.+|    +|.. +||+++|+|+|+.+ .++. .+.++.     +++++++ |+++++
T Consensus       284 v~l~~~l~~~~~~~l~~~ad~vv~~S----Gg~~-~EA~a~g~PvV~~~~~~~~-~e~v~~-----g~~~lv~~d~~~l~  352 (403)
T 3ot5_A          284 IHLIEPLDAIDFHNFLRKSYLVFTDS----GGVQ-EEAPGMGVPVLVLRDTTER-PEGIEA-----GTLKLIGTNKENLI  352 (403)
T ss_dssp             EEEECCCCHHHHHHHHHHEEEEEECC----HHHH-HHGGGTTCCEEECCSSCSC-HHHHHH-----TSEEECCSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHhcCEEEECC----ccHH-HHHHHhCCCEEEecCCCcc-hhheeC-----CcEEEcCCCHHHHH
Confidence            99999998889999999999999887    3444 89999999999984 4544 477654     4788887 999999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +++.++++ |++.+++|++++    ..|.....++++.+.+.+.+.
T Consensus       353 ~ai~~ll~-~~~~~~~m~~~~----~~~g~~~aa~rI~~~l~~~l~  393 (403)
T 3ot5_A          353 KEALDLLD-NKESHDKMAQAA----NPYGDGFAANRILAAIKSHFE  393 (403)
T ss_dssp             HHHHHHHH-CHHHHHHHHHSC----CTTCCSCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHc-CHHHHHHHHhhc----CcccCCcHHHHHHHHHHHHhC
Confidence            99999999 999999998765    345555556666666666554

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.88  E-value=7.5e-21  Score=182.64  Aligned_cols=340  Identities=11%  Similarity=0.081  Sum_probs=201.6

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      +||++..   +.+||--.-+..++++|.++  +++|.++++.. +.+.+..+.          .. +++..++.......
T Consensus         3 ~~i~i~~---GGTgGHi~palala~~L~~~--g~~V~~vg~~~-g~e~~~v~~----------~g-~~~~~i~~~~~~~~   65 (365)
T 3s2u_A            3 GNVLIMA---GGTGGHVFPALACAREFQAR--GYAVHWLGTPR-GIENDLVPK----------AG-LPLHLIQVSGLRGK   65 (365)
T ss_dssp             CEEEEEC---CSSHHHHHHHHHHHHHHHHT--TCEEEEEECSS-STHHHHTGG----------GT-CCEEECC-------
T ss_pred             CcEEEEc---CCCHHHHHHHHHHHHHHHhC--CCEEEEEECCc-hHhhchhhh----------cC-CcEEEEECCCcCCC
Confidence            5787742   22223334477899999998  56666655542 222222211          11 33333333222222


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      ..+..+......+.......+++++++||+|+.+.++..... ++....++|++++-..                     
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n---------------------  124 (365)
T 3s2u_A           66 GLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN---------------------  124 (365)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------------
Confidence            223333333444555667788999999999998876655433 3344678998863221                     


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC--CCCCCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH--SKTDGP  289 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~--~~~~~~  289 (488)
                            ......           .+.+.+.++.+....+..       +....+..+++|++..+.+.....  ....++
T Consensus       125 ------~~~G~~-----------nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~~~~  180 (365)
T 3s2u_A          125 ------AVAGTA-----------NRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLTGRR  180 (365)
T ss_dssp             ------SSCCHH-----------HHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCTTSC
T ss_pred             ------hhhhhH-----------HHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccCCCC
Confidence                  111111           122446688888776542       333457788899887665543332  122344


Q ss_pred             e-EEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEE-EecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        290 V-KIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF-IGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       290 ~-~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      + ++++.|+....+..+.+.+++..+..+      .+..++. +|.+       ..+.+.+..++.+  .++.+.+++  
T Consensus       181 ~~ilv~gGs~g~~~~~~~~~~al~~l~~~------~~~~vi~~~G~~-------~~~~~~~~~~~~~--~~~~v~~f~--  243 (365)
T 3s2u_A          181 VNLLVLGGSLGAEPLNKLLPEALAQVPLE------IRPAIRHQAGRQ-------HAEITAERYRTVA--VEADVAPFI--  243 (365)
T ss_dssp             CEEEECCTTTTCSHHHHHHHHHHHTSCTT------TCCEEEEECCTT-------THHHHHHHHHHTT--CCCEEESCC--
T ss_pred             cEEEEECCcCCccccchhhHHHHHhcccc------cceEEEEecCcc-------ccccccceecccc--cccccccch--
Confidence            4 455556666665566677787777544      2445444 3433       1255666666665  357888999  


Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc-------ceeccCCCccccceecC----CHHHHH
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM-------DIVIEDPETCRNGFLAC----DEVEYA  436 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~-------eiv~~~~~~~~~g~~~~----~~~~l~  436 (488)
                      +++.++|+.||++|.-+    ++.++.|++++|+|+|..+.+...+       +.+.+.    +.|++++    |+++|+
T Consensus       244 ~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~----G~a~~l~~~~~~~~~L~  315 (365)
T 3s2u_A          244 SDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS----GAGRLLPQKSTGAAELA  315 (365)
T ss_dssp             SCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT----TSEEECCTTTCCHHHHH
T ss_pred             hhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC----CCEEEeecCCCCHHHHH
Confidence            89999999999988643    4688999999999999877643221       234444    5677764    689999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHh
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~  480 (488)
                      ++|.++++ |++.+++|++++++.....+.+++++.++++.+.+
T Consensus       316 ~~i~~ll~-d~~~~~~m~~~a~~~~~~~aa~~ia~~i~~larG~  358 (365)
T 3s2u_A          316 AQLSEVLM-HPETLRSMADQARSLAKPEATRTVVDACLEVARGL  358 (365)
T ss_dssp             HHHHHHHH-CTHHHHHHHHHHHHTCCTTHHHHHHHHHHHHC---
T ss_pred             HHHHHHHC-CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccc
Confidence            99999999 99999999999987765556666666666665443

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.88  E-value=1.6e-21  Score=183.48  Aligned_cols=197  Identities=15%  Similarity=0.042  Sum_probs=149.2

Q ss_pred             HHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHH
Q psy15555        234 LYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQ  313 (488)
Q Consensus       234 ~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~  313 (488)
                      .++.++++||.|++.|+.+++.+.+.+....++.++++. |...  +.......++++++|+|++.....    ++.   
T Consensus       126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~G~~~~ki~~~~~~-~~~~--~~~~~~~~~~~~i~yaG~l~k~~~----L~~---  195 (339)
T 3rhz_A          126 RTIAYYNKADVVVAPSQKMIDKLRDFGMNVSKTVVQGMW-DHPT--QAPMFPAGLKREIHFPGNPERFSF----VKE---  195 (339)
T ss_dssp             HHHHHHTTCSEEEESCHHHHHHHHHTTCCCSEEEECCSC-CCCC--CCCCCCCEEEEEEEECSCTTTCGG----GGG---
T ss_pred             HHHHHHHHCCEEEECCHHHHHHHHHcCCCcCceeecCCC-CccC--cccccccCCCcEEEEeCCcchhhH----HHh---
Confidence            577889999999999999999999854433456444432 3211  111112234678999999984221    222   


Q ss_pred             hHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcC-C------C
Q psy15555        314 LRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM-W------N  386 (488)
Q Consensus       314 l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s-~------~  386 (488)
                      +   .     ++++|+|+|+|+..                .++ +|+|+|++|.+|+..+|+.+|+.+... .      .
T Consensus       196 l---~-----~~~~f~ivG~G~~~----------------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~  250 (339)
T 3rhz_A          196 W---K-----YDIPLKVYTWQNVE----------------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQS  250 (339)
T ss_dssp             C---C-----CSSCEEEEESCCCC----------------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHT
T ss_pred             C---C-----CCCeEEEEeCCccc----------------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHH
Confidence            2   2     68999999999732                234 899999999999999999989766541 1      1


Q ss_pred             CcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCH
Q psy15555        387 EHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSM  466 (488)
Q Consensus       387 e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~  466 (488)
                      ...|++++||||+|+|||+++.++.. ++++++    ++|+.+++.+++++++..+   +++.+++|++++++.++++++
T Consensus       251 ~~~P~Kl~eymA~G~PVI~~~~~~~~-~~v~~~----~~G~~~~~~~e~~~~i~~l---~~~~~~~m~~na~~~a~~~~~  322 (339)
T 3rhz_A          251 LYCSYKLGSFLAAGIPVIVQEGIANQ-ELIENN----GLGWIVKDVEEAIMKVKNV---NEDEYIELVKNVRSFNPILRK  322 (339)
T ss_dssp             TCCCHHHHHHHHHTCCEEEETTCTTT-HHHHHH----TCEEEESSHHHHHHHHHHC---CHHHHHHHHHHHHHHTHHHHT
T ss_pred             hcChHHHHHHHHcCCCEEEccChhHH-HHHHhC----CeEEEeCCHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHhhc
Confidence            24589999999999999999998886 999888    8999999999999988874   567899999999998877777


Q ss_pred             HHHHHHH
Q psy15555        467 EEFKNGF  473 (488)
Q Consensus       467 ~~~~~~~  473 (488)
                      +.+.++.
T Consensus       323 ~~f~k~~  329 (339)
T 3rhz_A          323 GFFTRRL  329 (339)
T ss_dssp             THHHHHH
T ss_pred             cHHHHHH
Confidence            7776664

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.85  E-value=3e-19  Score=175.26  Aligned_cols=351  Identities=10%  Similarity=-0.011  Sum_probs=211.2

Q ss_pred             cccccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecc-
Q psy15555         49 YNVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRR-  127 (488)
Q Consensus        49 ~~~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  127 (488)
                      +..+|||+++...   ++|....+..++++|.++  +++|.+++...   .......          .. +.+..++.. 
T Consensus        17 ~~~~MrIl~~~~~---~~Gh~~~~~~la~~L~~~--GheV~v~~~~~---~~~~~~~----------~g-~~~~~~~~~~   77 (412)
T 3otg_A           17 EGRHMRVLFASLG---THGHTYPLLPLATAARAA--GHEVTFATGEG---FAGTLRK----------LG-FEPVATGMPV   77 (412)
T ss_dssp             -CCSCEEEEECCS---SHHHHGGGHHHHHHHHHT--TCEEEEEECGG---GHHHHHH----------TT-CEEEECCCCH
T ss_pred             ccceeEEEEEcCC---CcccHHHHHHHHHHHHHC--CCEEEEEccHH---HHHHHHh----------cC-CceeecCccc
Confidence            4557999998633   345667788999999999  56666666541   1222211          12 445544420 


Q ss_pred             --cee-----------------eccCchhHHHHHH--HHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEE
Q psy15555        128 --KFV-----------------EASLYPYFTLLGQ--SIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVAC  186 (488)
Q Consensus       128 --~~~-----------------~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~  186 (488)
                        ...                 ..........+..  .......+.+.+++++||+|+.+..... ...+....++|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~-~~~aa~~~giP~v~  156 (412)
T 3otg_A           78 FDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYG-AGLAALKAGIPTIC  156 (412)
T ss_dssp             HHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHH-HHHHHHHHTCCEEE
T ss_pred             ccchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhH-HHHHHHHcCCCEEE
Confidence              000                 0000000111111  1112355677888999999887643322 23444467999998


Q ss_pred             EEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHH-HHHHH--------hcccCEEEEcChhHHHHHH
Q psy15555        187 YIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL-LYSHV--------GKYSDIIMVNSSWTEEHVI  257 (488)
Q Consensus       187 ~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~d~ii~~s~~~~~~~~  257 (488)
                      +.|.+......                          .....+.+.. ..+..        ...+|.+++.++...+...
T Consensus       157 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~  210 (412)
T 3otg_A          157 HGVGRDTPDDL--------------------------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPE  210 (412)
T ss_dssp             ECCSCCCCSHH--------------------------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHH
T ss_pred             ecccccCchhh--------------------------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCc
Confidence            77765421110                          0111111111 11111        2357889999887766665


Q ss_pred             HHhccCCceEEEcCCCCc-hhhhcc-CCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCC
Q psy15555        258 QLWNCQLKTYKLYPPCDT-EDLKKI-THSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTR  335 (488)
Q Consensus       258 ~~~~~~~k~~vi~~~~d~-~~~~~~-~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~  335 (488)
                      +..... ...+.+.+.+. ...... .....+++.+++++|+.. .++.+.+.+++..+.+       .+.++++++++.
T Consensus       211 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-------~~~~~~~~~g~~  281 (412)
T 3otg_A          211 FRARPR-RHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG-------LDADVLVASGPS  281 (412)
T ss_dssp             HHTCTT-EEECCCCCCCCCCCCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-------SSSEEEEECCSS
T ss_pred             ccCCCC-cceeeccCCCCCCCCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-------CCCEEEEEECCC
Confidence            433211 11111112111 111111 011224566788888886 6677777777666643       256666666543


Q ss_pred             C-CCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----
Q psy15555        336 N-EEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----  410 (488)
Q Consensus       336 ~-~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----  410 (488)
                      . .      ++++      +++++|.+.|++   ++..+|+.||++|..+    ++.+++|||++|+|+|+.+.++    
T Consensus       282 ~~~------~~l~------~~~~~v~~~~~~---~~~~~l~~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~  342 (412)
T 3otg_A          282 LDV------SGLG------EVPANVRLESWV---PQAALLPHVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFA  342 (412)
T ss_dssp             CCC------TTCC------CCCTTEEEESCC---CHHHHGGGCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred             CCh------hhhc------cCCCcEEEeCCC---CHHHHHhcCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHH
Confidence            2 2      1121      246789999998   4889999999999764    3478999999999999987654    


Q ss_pred             CccceeccCCCccccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        411 PKMDIVIEDPETCRNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       411 ~~~eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +. +.+.+.    ++|++++    |++++++++.++++ |++.+++|++.+++..+.++++.+++.+.+++..
T Consensus       343 ~~-~~v~~~----g~g~~~~~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          343 NA-QAVAQA----GAGDHLLPDNISPDSVSGAAKRLLA-EESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR  409 (412)
T ss_dssp             HH-HHHHHH----TSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred             HH-HHHHHc----CCEEecCcccCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence            33 555555    6888875    78999999999999 9999999999999988888999999998887743

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.80  E-value=1.1e-17  Score=164.92  Aligned_cols=367  Identities=11%  Similarity=-0.001  Sum_probs=202.0

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceee
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVE  131 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  131 (488)
                      .|||+++.   ..++|....+..++++|.++  |++|.++++...   ......          .. +.+..++......
T Consensus         7 m~kIl~~~---~~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~~~---~~~~~~----------~g-~~~~~~~~~~~~~   67 (430)
T 2iyf_A            7 PAHIAMFS---IAAHGHVNPSLEVIRELVAR--GHRVTYAIPPVF---ADKVAA----------TG-PRPVLYHSTLPGP   67 (430)
T ss_dssp             -CEEEEEC---CSCHHHHGGGHHHHHHHHHT--TCEEEEEECGGG---HHHHHT----------TS-CEEEECCCCSCCT
T ss_pred             cceEEEEe---CCCCccccchHHHHHHHHHC--CCeEEEEeCHHH---HHHHHh----------CC-CEEEEcCCcCccc
Confidence            36999863   23345667889999999998  567777766521   111111          12 4444444321000


Q ss_pred             --------ccCchhHHHHHH-HHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHH
Q psy15555        132 --------ASLYPYFTLLGQ-SIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVA  202 (488)
Q Consensus       132 --------~~~~~~~~~~~~-~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~  202 (488)
                              ......+..+.. .......+.+.++..+||+||...... ....+....++|++...+.+..+..+.....
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~  146 (430)
T 2iyf_A           68 DADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSY-PARVLARRWGVPAVSLSPNLVAWKGYEEEVA  146 (430)
T ss_dssp             TSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCH-HHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccH-HHHHHHHHcCCCEEEEecccccccccccccc
Confidence                    000111111111 123344566778889999888654322 2223333568999887765432111100000


Q ss_pred             hhhhcccCccccccCccchhhhHHHHHHHHHHHHH---------HhcccCEEEEcChhHHHHHHHHhccCCc-eEEEcCC
Q psy15555        203 RRVITHNNSQRVANNPILTSFKLFYYKVFALLYSH---------VGKYSDIIMVNSSWTEEHVIQLWNCQLK-TYKLYPP  272 (488)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~ii~~s~~~~~~~~~~~~~~~k-~~vi~~~  272 (488)
                      ...  +.   .. .+  ..... .+...+..+.+.         ....+|.+++.+....+.....+  +.+ +..++++
T Consensus       147 ~~~--~~---~~-~~--~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~v~~vG~~  215 (430)
T 2iyf_A          147 EPM--WR---EP-RQ--TERGR-AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV--DEDVYTFVGAC  215 (430)
T ss_dssp             HHH--HH---HH-HH--SHHHH-HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS--CTTTEEECCCC
T ss_pred             cch--hh---hh-cc--chHHH-HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC--CCccEEEeCCc
Confidence            000  00   00 00  00000 011111111111         12246888888776544332212  234 7777765


Q ss_pred             CCchhh-hccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEE-EEEecCCCCCcHHHHHHHHHHH
Q psy15555        273 CDTEDL-KKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKL-IFIGSTRNEEDEVCVKDMQDLC  350 (488)
Q Consensus       273 ~d~~~~-~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l-~ivG~~~~~~~~~~~~~l~~~~  350 (488)
                      ++.... ........++..+++++|++. .+..+.+.+++..+. +.     +++++ +++|.++..      ++++   
T Consensus       216 ~~~~~~~~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~-~~-----~~~~~~~~~G~~~~~------~~l~---  279 (430)
T 2iyf_A          216 QGDRAEEGGWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFG-NL-----PGWHLVLQIGRKVTP------AELG---  279 (430)
T ss_dssp             C-----CCCCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHT-TC-----TTEEEEEECC---CG------GGGC---
T ss_pred             CCCCCCCCCCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHh-cC-----CCeEEEEEeCCCCCh------HHhc---
Confidence            542210 011111223456788999987 455444444444443 21     36677 467876532      1221   


Q ss_pred             HhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccc
Q psy15555        351 KHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNG  426 (488)
Q Consensus       351 ~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g  426 (488)
                         .++++|.+.|++++.   .+|+.||++|..+    ++.+++|||++|+|+|+.+..+    +. +.+.+.    +.|
T Consensus       280 ---~~~~~v~~~~~~~~~---~~l~~ad~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~----g~g  344 (430)
T 2iyf_A          280 ---ELPDNVEVHDWVPQL---AILRQADLFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGL----GVA  344 (430)
T ss_dssp             ---SCCTTEEEESSCCHH---HHHTTCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHT----TSE
T ss_pred             ---cCCCCeEEEecCCHH---HHhhccCEEEECC----CccHHHHHHHhCCCEEECCCccchHHHH-HHHHHc----CCE
Confidence               246789999999654   7899999988754    3368999999999999998754    23 445555    678


Q ss_pred             eecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        427 FLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       427 ~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                      +.++    |+++++++|.++++ |++.++++++.+++..+.++++.+++.+.+++++..
T Consensus       345 ~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  402 (430)
T 2iyf_A          345 RKLATEEATADLLRETALALVD-DPEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH  402 (430)
T ss_dssp             EECCCC-CCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred             EEcCCCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence            8875    78999999999999 999999999999887777888888888877765543

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.77  E-value=5.6e-18  Score=165.33  Aligned_cols=153  Identities=9%  Similarity=0.029  Sum_probs=104.4

Q ss_pred             CCCeEEEEeeccCCCC----------ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC
Q psy15555        287 DGPVKIISVAQFRPEK----------DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE  356 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k----------~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~  356 (488)
                      +++.+++++|++...+          .+..+++++..+          +++++++++++..      +.+.      .++
T Consensus       226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~----------~~~~v~~~~~~~~------~~l~------~~~  283 (398)
T 4fzr_A          226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL----------GFEVVVAVSDKLA------QTLQ------PLP  283 (398)
T ss_dssp             SSCEEECC----------------CCSHHHHHHHGGGG----------TCEEEECCCC--------------------CC
T ss_pred             CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC----------CCEEEEEeCCcch------hhhc------cCC
Confidence            4567888889986544          344444444332          5688888776421      2222      236


Q ss_pred             CcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCC----CCccceeccCCCccccceecC--
Q psy15555        357 NNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSG----GPKMDIVIEDPETCRNGFLAC--  430 (488)
Q Consensus       357 ~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~----~~~~eiv~~~~~~~~~g~~~~--  430 (488)
                      ++|.+.|+++   +..+++.||++|.    .+++.+++|||++|+|+|+.+..    ++. +.+.+.    +.|+.++  
T Consensus       284 ~~v~~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~----g~g~~~~~~  351 (398)
T 4fzr_A          284 EGVLAAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAA----GAGVEVPWE  351 (398)
T ss_dssp             TTEEEESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHT----TSEEECC--
T ss_pred             CcEEEeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHc----CCEEecCcc
Confidence            7999999984   6778999999995    34467899999999999996654    333 455555    7888876  


Q ss_pred             --CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHH
Q psy15555        431 --DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFL  474 (488)
Q Consensus       431 --~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~  474 (488)
                        |++++++++.++++ |++.++++++.+++..+..+++.+++.+.
T Consensus       352 ~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (398)
T 4fzr_A          352 QAGVESVLAACARIRD-DSSYVGNARRLAAEMATLPTPADIVRLIE  396 (398)
T ss_dssp             -----CHHHHHHHHHH-CTHHHHHHHHHHHHHTTSCCHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence              78899999999999 99999999999988888889998887764

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.76  E-value=1.5e-17  Score=161.90  Aligned_cols=161  Identities=8%  Similarity=-0.002  Sum_probs=119.3

Q ss_pred             CCCeEEEEeeccCCCCCh-HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFRPEKDH-PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~-~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +++.++++.|+....++. ..+++++.+. ++.     |+++++++++++..      +.+.      +++++|.+.+++
T Consensus       217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~-----p~~~~v~~~~~~~~------~~l~------~~~~~v~~~~~~  278 (391)
T 3tsa_A          217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TEL-----PGVEAVIAVPPEHR------ALLT------DLPDNARIAESV  278 (391)
T ss_dssp             SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS-----TTEEEEEECCGGGG------GGCT------TCCTTEEECCSC
T ss_pred             CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC-----CCeEEEEEECCcch------hhcc------cCCCCEEEeccC
Confidence            345677778888654444 6677777777 665     78999999876421      2221      346789999998


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC------CHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC------DEVEY  435 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~------~~~~l  435 (488)
                      +..+   +++.||++|..    +++.+++|||++|+|+|+.+..+    +. +.+.+.    +.|..++      |++++
T Consensus       279 ~~~~---ll~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~----g~g~~~~~~~~~~~~~~l  346 (391)
T 3tsa_A          279 PLNL---FLRTCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAA----GAGICLPDEQAQSDHEQF  346 (391)
T ss_dssp             CGGG---TGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHT----TSEEECCSHHHHTCHHHH
T ss_pred             CHHH---HHhhCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHc----CCEEecCcccccCCHHHH
Confidence            7654   45999999963    44468999999999999976532    22 445555    6788764      48999


Q ss_pred             HHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        436 AQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       436 ~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      ++++.++++ |++.++++++.+++..+..+++.+++.+.+++.
T Consensus       347 ~~ai~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          347 TDSIATVLG-DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHHHHHT-CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred             HHHHHHHHc-CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence            999999999 999999999998888888899888887766543

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.76  E-value=1.4e-16  Score=153.14  Aligned_cols=272  Identities=13%  Similarity=0.030  Sum_probs=173.1

Q ss_pred             HHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        148 MILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       148 ~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      +..+.+++++++||+++.+......++ .+....++|++ +++....+.                    ..   ......
T Consensus        83 ~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~-h~eaglrs~--------------------~~---~~pee~  138 (385)
T 4hwg_A           83 IEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIF-HMEAGNRCF--------------------DQ---RVPEEI  138 (385)
T ss_dssp             HHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEE-EESCCCCCS--------------------CT---TSTHHH
T ss_pred             HHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEE-EEeCCCccc--------------------cc---cCcHHH
Confidence            455778899999998876543322222 33346789964 333221100                    00   000001


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhc---cCC------CCCCCCeEEEEee
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKK---ITH------SKTDGPVKIISVA  296 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~---~~~------~~~~~~~~i~~~g  296 (488)
                      .++       .+-+.+|.++++|+..++++.+.+..++++.+++|+ +|......   ...      ....++.+++..+
T Consensus       139 nR~-------~~~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~~~iLvt~h  211 (385)
T 4hwg_A          139 NRK-------IIDHISDVNITLTEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPKQYFLISSH  211 (385)
T ss_dssp             HHH-------HHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTTSEEEEEEC
T ss_pred             HHH-------HHHhhhceeecCCHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcCCEEEEEeC
Confidence            111       122457999999999999999976656689999997 45332210   000      1223455566666


Q ss_pred             ccC---CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhc-C-C--CCcEEEecCCChHH
Q psy15555        297 QFR---PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHL-S-L--ENNVEFKVNLPYED  369 (488)
Q Consensus       297 ~~~---~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~-~-l--~~~v~~~g~~~~~e  369 (488)
                      +.+   ..+++..+++|+.++.++.      ++.+++ +.+|         .+++.+++. + +  .++|.+.+.+++.+
T Consensus       212 r~e~~~~~~~l~~ll~al~~l~~~~------~~~vv~-p~~p---------~~~~~l~~~~~~~~~~~~v~l~~~lg~~~  275 (385)
T 4hwg_A          212 REENVDVKNNLKELLNSLQMLIKEY------NFLIIF-STHP---------RTKKRLEDLEGFKELGDKIRFLPAFSFTD  275 (385)
T ss_dssp             CC-----CHHHHHHHHHHHHHHHHH------CCEEEE-EECH---------HHHHHHHTSGGGGGTGGGEEECCCCCHHH
T ss_pred             CchhcCcHHHHHHHHHHHHHHHhcC------CeEEEE-ECCh---------HHHHHHHHHHHHhcCCCCEEEEcCCCHHH
Confidence            543   2356788999999987653      455544 4453         244445444 3 2  36899999998889


Q ss_pred             HHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHH
Q psy15555        370 MKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       370 l~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~  448 (488)
                      +..+|+.||+++..|     |....||+++|+|+|+.+......|.++.+     ++.++. |++++.+++.++++ |++
T Consensus       276 ~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-----~~~lv~~d~~~i~~ai~~ll~-d~~  344 (385)
T 4hwg_A          276 YVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-----TLIMSGFKAERVLQAVKTITE-EHD  344 (385)
T ss_dssp             HHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-----CCEECCSSHHHHHHHHHHHHT-TCB
T ss_pred             HHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-----ceEEcCCCHHHHHHHHHHHHh-ChH
Confidence            999999999998776     346799999999999987644333666554     677776 99999999999999 888


Q ss_pred             HHHHHHHHHHHH-HhhcCHHHHHHHHHHHH
Q psy15555        449 TKTRISQNAVSS-VDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       449 ~~~~~~~~a~~~-~~~~s~~~~~~~~~~~~  477 (488)
                      .+++|++++..+ .+..+.+++++.+.+.+
T Consensus       345 ~~~~m~~~~~~~~g~g~aa~rI~~~l~~~~  374 (385)
T 4hwg_A          345 NNKRTQGLVPDYNEAGLVSKKILRIVLSYV  374 (385)
T ss_dssp             TTBCCSCCCHHHHTCCCHHHHHHHHHHHHH
T ss_pred             HHHHhhccCCCCCCCChHHHHHHHHHHHHh
Confidence            877776655544 34444455554444433

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.72  E-value=1.1e-15  Score=149.29  Aligned_cols=362  Identities=12%  Similarity=0.068  Sum_probs=196.1

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee--
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV--  130 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--  130 (488)
                      |||+++...   +.|....+..++++|.++  |++|.+.++..   ..+....          .. +.+..++.+...  
T Consensus         5 ~~il~~~~~---~~Ghv~~~~~La~~L~~~--GheV~v~~~~~---~~~~~~~----------~G-~~~~~~~~~~~~~~   65 (402)
T 3ia7_A            5 RHILFANVQ---GHGHVYPSLGLVSELARR--GHRITYVTTPL---FADEVKA----------AG-AEVVLYKSEFDTFH   65 (402)
T ss_dssp             CEEEEECCS---SHHHHHHHHHHHHHHHHT--TCEEEEEECHH---HHHHHHH----------TT-CEEEECCCGGGTSS
T ss_pred             CEEEEEeCC---CCcccccHHHHHHHHHhC--CCEEEEEcCHH---HHHHHHH----------cC-CEEEeccccccccc
Confidence            399987532   235557788999999999  56666666431   1111111          11 444444322110  


Q ss_pred             ------eccCchhHHH--HHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHH--H
Q psy15555        131 ------EASLYPYFTL--LGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLT--R  200 (488)
Q Consensus       131 ------~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~--~  200 (488)
                            .......+..  ..........+.+.++.++||+||..+........+....++|++.+.+....+.....  .
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~  145 (402)
T 3ia7_A           66 VPEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKE  145 (402)
T ss_dssp             SSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccc
Confidence                  0011111111  11112234456677888999988865222223334444679999887754432111100  0


Q ss_pred             HHhhhhcccCccccccCccchhhhHHHHHHHHHH-HH--------HHhccc-CEEEEcChhHHHHHHHHhccCCceEEEc
Q psy15555        201 VARRVITHNNSQRVANNPILTSFKLFYYKVFALL-YS--------HVGKYS-DIIMVNSSWTEEHVIQLWNCQLKTYKLY  270 (488)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~-d~ii~~s~~~~~~~~~~~~~~~k~~vi~  270 (488)
                      ......  .      ...  ... ..+...+..+ .+        ...... |..++......+.....++  .++..++
T Consensus       146 ~~~~~~--~------~~~--~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~vG  212 (402)
T 3ia7_A          146 LWKSNG--Q------RHP--ADV-EAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFD--ERFAFVG  212 (402)
T ss_dssp             HHHHHT--C------CCG--GGS-HHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGCC--TTEEECC
T ss_pred             cccccc--c------cCh--hhH-HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccCC--CCeEEeC
Confidence            000000  0      000  000 0011111111 10        111112 6666666555443333222  3466665


Q ss_pred             CCCCchh-hhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEE-EecCCCCCcHHHHHHHHH
Q psy15555        271 PPCDTED-LKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF-IGSTRNEEDEVCVKDMQD  348 (488)
Q Consensus       271 ~~~d~~~-~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~l~~  348 (488)
                      +...... .........+++.++++.|+....+. +.+.+.+..+ .+.      +.++++ +|.++..      +.++ 
T Consensus       213 p~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~-~~~~~~~~~~-~~~------~~~~~~~~g~~~~~------~~~~-  277 (402)
T 3ia7_A          213 PTLTGRDGQPGWQPPRPDAPVLLVSLGNQFNEHP-EFFRACAQAF-ADT------PWHVVMAIGGFLDP------AVLG-  277 (402)
T ss_dssp             CCCCC----CCCCCSSTTCCEEEEECCSCSSCCH-HHHHHHHHHH-TTS------SCEEEEECCTTSCG------GGGC-
T ss_pred             CCCCCcccCCCCcccCCCCCEEEEECCCCCcchH-HHHHHHHHHH-hcC------CcEEEEEeCCcCCh------hhhC-
Confidence            5443211 11111112345677888898865542 2222223323 222      355555 5554321      1121 


Q ss_pred             HHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC-C----CCccceeccCCCcc
Q psy15555        349 LCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS-G----GPKMDIVIEDPETC  423 (488)
Q Consensus       349 ~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~-~----~~~~eiv~~~~~~~  423 (488)
                           .+++++.+.+++++.   ++++.||++|..+    +..+++||+++|+|+|+.+. .    ++. +.+.+.    
T Consensus       278 -----~~~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~----  340 (402)
T 3ia7_A          278 -----PLPPNVEAHQWIPFH---SVLAHARACLTHG----TTGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIEL----  340 (402)
T ss_dssp             -----SCCTTEEEESCCCHH---HHHTTEEEEEECC----CHHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHT----
T ss_pred             -----CCCCcEEEecCCCHH---HHHhhCCEEEECC----CHHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHc----
Confidence                 146789999999554   8999999988754    23678999999999997665 3    333 455555    


Q ss_pred             ccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        424 RNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       424 ~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +.|..++    |++++++++.++++ |++.++++++.+++..+..+.+..++.+.+++..
T Consensus       341 g~g~~~~~~~~~~~~l~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  399 (402)
T 3ia7_A          341 GLGSVLRPDQLEPASIREAVERLAA-DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR  399 (402)
T ss_dssp             TSEEECCGGGCSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEccCCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence            6787765    78999999999999 9999999999888877778888888888777654

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.72  E-value=3e-15  Score=146.78  Aligned_cols=365  Identities=11%  Similarity=-0.001  Sum_probs=197.9

Q ss_pred             ccccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccce
Q psy15555         50 NVLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKF  129 (488)
Q Consensus        50 ~~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  129 (488)
                      ...|||+|+...   +.|-..-+..++++|.++  |++|.+.++..   ..+....          .. +.+..++.+..
T Consensus        18 ~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~--Gh~V~v~~~~~---~~~~~~~----------~G-~~~~~~~~~~~   78 (415)
T 3rsc_A           18 RHMAHLLIVNVA---SHGLILPTLTVVTELVRR--GHRVSYVTAGG---FAEPVRA----------AG-ATVVPYQSEII   78 (415)
T ss_dssp             -CCCEEEEECCS---CHHHHGGGHHHHHHHHHT--TCEEEEEECGG---GHHHHHH----------TT-CEEEECCCSTT
T ss_pred             ccCCEEEEEeCC---CccccccHHHHHHHHHHC--CCEEEEEeCHH---HHHHHHh----------cC-CEEEecccccc
Confidence            346899987532   335557788999999999  56666666431   1222221          11 44444432111


Q ss_pred             e--------eccCchhHH--HHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHH
Q psy15555        130 V--------EASLYPYFT--LLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLT  199 (488)
Q Consensus       130 ~--------~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~  199 (488)
                      .        .......+.  ...........+.+.+++++||+|+..+........+....++|++.+.+..........
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~  158 (415)
T 3rsc_A           79 DADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF  158 (415)
T ss_dssp             TCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH
T ss_pred             ccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc
Confidence            0        011111111  111222334556678889999988754222333344445789999987765432111100


Q ss_pred             --HHHhhhhcccCccccccCccchhhhHHHHHHHHHHHH----------HHhcccCEEEEcChhHHHHHHHHhccCCceE
Q psy15555        200 --RVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYS----------HVGKYSDIIMVNSSWTEEHVIQLWNCQLKTY  267 (488)
Q Consensus       200 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~  267 (488)
                        ......   ..     ...  ... ..+...+..+.+          ......|..++......+.....+  +.++.
T Consensus       159 ~~~~~~~~---~~-----~~p--~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~  225 (415)
T 3rsc_A          159 SQDMVTLA---GT-----IDP--LDL-PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF--DDRFV  225 (415)
T ss_dssp             HHHHHHHH---TC-----CCG--GGC-HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC--CTTEE
T ss_pred             cccccccc---cc-----CCh--hhH-HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC--CCceE
Confidence              000000   00     000  000 001111111111          111112667766655444333322  23455


Q ss_pred             EEcCCCCch-hhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEE-EecCCCCCcHHHHHH
Q psy15555        268 KLYPPCDTE-DLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIF-IGSTRNEEDEVCVKD  345 (488)
Q Consensus       268 vi~~~~d~~-~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~i-vG~~~~~~~~~~~~~  345 (488)
                      .+++.+... ..........+++.++++.|+.....+ + +++.+.+...+.      ++++++ +|.++..      +.
T Consensus       226 ~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~-~-~~~~~~~al~~~------~~~~v~~~g~~~~~------~~  291 (415)
T 3rsc_A          226 FVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRP-G-FFRDCARAFDGQ------PWHVVMTLGGQVDP------AA  291 (415)
T ss_dssp             ECCCCCCCCGGGCCCCCCSSCCCEEEEECTTTSCCCH-H-HHHHHHHHHTTS------SCEEEEECTTTSCG------GG
T ss_pred             EeCCCCCCcccCcCccccCCCCCEEEEECCCCCCChH-H-HHHHHHHHHhcC------CcEEEEEeCCCCCh------HH
Confidence            665543221 111111112345677888888764432 2 233332222232      367666 5554322      11


Q ss_pred             HHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCC
Q psy15555        346 MQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPE  421 (488)
Q Consensus       346 l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~  421 (488)
                      ++      .+++++.+.++++..   .+++.||++|..+    +..+++||+++|+|+|+.+..+    +. +.+.+.  
T Consensus       292 l~------~~~~~v~~~~~~~~~---~ll~~ad~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~--  355 (415)
T 3rsc_A          292 LG------DLPPNVEAHRWVPHV---KVLEQATVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQL--  355 (415)
T ss_dssp             GC------CCCTTEEEESCCCHH---HHHHHEEEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHH--
T ss_pred             hc------CCCCcEEEEecCCHH---HHHhhCCEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHc--
Confidence            21      246789999999654   7899999988753    2368899999999999965532    22 344444  


Q ss_pred             ccccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        422 TCRNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       422 ~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                        +.|..+.    +++++++++.++++ |++.++++++.+.+..+..+.+.+++.+.+++..
T Consensus       356 --g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  414 (415)
T 3rsc_A          356 --GLGAVLPGEKADGDTLLAAVGAVAA-DPALLARVEAMRGHVRRAGGAARAADAVEAYLAR  414 (415)
T ss_dssp             --TCEEECCGGGCCHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             --CCEEEcccCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence              5777764    78999999999999 9999999998888777777888888877776653

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.71  E-value=2.5e-16  Score=153.63  Aligned_cols=160  Identities=10%  Similarity=0.044  Sum_probs=111.7

Q ss_pred             CCCeEEEEeeccCCC-CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFRPE-KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~-k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +++.+++++|++... ++...+.+++..+.+       .+++++++++++..      +.+.      +++++|.+.|++
T Consensus       231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-------~~~~~v~~~g~~~~------~~l~------~~~~~v~~~~~~  291 (398)
T 3oti_A          231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGE-------VDADFVLALGDLDI------SPLG------TLPRNVRAVGWT  291 (398)
T ss_dssp             SSCEEEECCTTTHHHHHCGGGHHHHHHHHHT-------SSSEEEEECTTSCC------GGGC------SCCTTEEEESSC
T ss_pred             CCCEEEEEcCCCccccCcHHHHHHHHHHHHc-------CCCEEEEEECCcCh------hhhc------cCCCcEEEEccC
Confidence            456788888998544 344555555555542       36788888877532      1121      346789999998


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCC----CCCcc-ceeccCCCccccceecCCHHHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKS----GGPKM-DIVIEDPETCRNGFLACDEVEYAQTIK  440 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~----~~~~~-eiv~~~~~~~~~g~~~~~~~~l~~~i~  440 (488)
                      +   +..+++.||++|..    +++.+++|||++|+|+|+.+.    .++.. +.+++.    +.|+.++..+.-.+.+.
T Consensus       292 ~---~~~ll~~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~----g~g~~~~~~~~~~~~l~  360 (398)
T 3oti_A          292 P---LHTLLRTCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR----GIGLVSTSDKVDADLLR  360 (398)
T ss_dssp             C---HHHHHTTCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH----TSEEECCGGGCCHHHHH
T ss_pred             C---HHHHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC----CCEEeeCCCCCCHHHHH
Confidence            4   55678889999963    445689999999999999544    34420 444455    68888762222233444


Q ss_pred             HHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        441 LILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      ++++ |++.++++++.+++..+..+++.+++.+.+++
T Consensus       361 ~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  396 (398)
T 3oti_A          361 RLIG-DESLRTAAREVREEMVALPTPAETVRRIVERI  396 (398)
T ss_dssp             HHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred             HHHc-CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence            8888 99999999999988888889999988887664

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.66  E-value=3.1e-14  Score=138.05  Aligned_cols=156  Identities=8%  Similarity=0.020  Sum_probs=113.3

Q ss_pred             CCeEEEEeeccCCC-------CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        288 GPVKIISVAQFRPE-------KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       288 ~~~~i~~~g~~~~~-------k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                      +..+++++|+....       +....+++++..          .+++++++++++     + .++++.      ++++|.
T Consensus       210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~----------~~~~~~~~~g~~-----~-~~~l~~------~~~~v~  267 (384)
T 2p6p_A          210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR----------WDVELIVAAPDT-----V-AEALRA------EVPQAR  267 (384)
T ss_dssp             SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT----------TTCEEEEECCHH-----H-HHHHHH------HCTTSE
T ss_pred             CCEEEEECCCCCccccccccHHHHHHHHHHHhc----------CCcEEEEEeCCC-----C-HHhhCC------CCCceE
Confidence            45688999998765       455566666543          256777766542     1 133321      257899


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC----CH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC----DE  432 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~----~~  432 (488)
                      + |+++.   .++|+.||++|..    +++.+++|||++|+|+|+.+..+    +. +.+.+.    +.|+.++    ++
T Consensus       268 ~-~~~~~---~~~l~~~d~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~----g~g~~~~~~~~~~  334 (384)
T 2p6p_A          268 V-GWTPL---DVVAPTCDLLVHH----AGGVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADY----GAAIALLPGEDST  334 (384)
T ss_dssp             E-ECCCH---HHHGGGCSEEEEC----SCTTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHH----TSEEECCTTCCCH
T ss_pred             E-cCCCH---HHHHhhCCEEEeC----CcHHHHHHHHHhCCCEEEccCcccchHHH-HHHHHC----CCeEecCcCCCCH
Confidence            9 99864   4578999999974    44578999999999999998743    33 445554    6788765    78


Q ss_pred             HHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Q psy15555        433 VEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       433 ~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~  479 (488)
                      +++++++.++++ |++.++++++.+.+....-..+.+++.+.+++..
T Consensus       335 ~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  380 (384)
T 2p6p_A          335 EAIADSCQELQA-KDTYARRAQDLSREISGMPLPATVVTALEQLAHH  380 (384)
T ss_dssp             HHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhh
Confidence            999999999999 9999999999888777666777777777666543

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.65  E-value=2e-14  Score=142.19  Aligned_cols=269  Identities=9%  Similarity=0.046  Sum_probs=175.6

Q ss_pred             HHHHHhhhcCCcEEEecCCccchhhhhh-hhCCCeeEE-EEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHH
Q psy15555        150 LGVEALLSFQPDIYIDTMGYAFTYPLFS-YIGGSKVAC-YIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFY  227 (488)
Q Consensus       150 ~~~~~l~~~~pDiii~~~~~~~~~~~~~-~~~~~~~v~-~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (488)
                      .+.+.+++.++||++...+......... ..+..|+-+ ++.+|..                       .          
T Consensus       340 ~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQvs~lGyp~T-----------------------T----------  386 (631)
T 3q3e_A          340 FIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPAT-----------------------T----------  386 (631)
T ss_dssp             HHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEEEEECSSCSC-----------------------C----------
T ss_pred             HHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCchheEeccCCCcc-----------------------c----------
Confidence            3567788999999998766555443332 246677744 5555541                       0          


Q ss_pred             HHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC---CCchhhhccCCC--CCCC--CeEEEEeeccCC
Q psy15555        228 YKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP---CDTEDLKKITHS--KTDG--PVKIISVAQFRP  300 (488)
Q Consensus       228 ~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~---~d~~~~~~~~~~--~~~~--~~~i~~~g~~~~  300 (488)
                                -+...|.+++-..-. . -.+.  ..+++..+|..   +++....+....  .+.+  .++++.+++  .
T Consensus       387 ----------Gl~~iDY~i~D~~~~-~-~~~~--ysEklirLP~~~~~~~p~~~~p~r~~~~lp~~~G~v~Fg~fn~--~  450 (631)
T 3q3e_A          387 ----------HSDFIEYVIVEDDYV-G-SEEC--FSETLLRLPKDALPYVPSALAPEKVDYLLRENPEVVNIGIAST--T  450 (631)
T ss_dssp             ----------CCTTCCEEEEEGGGC-C-CGGG--CSSEEEEECTTSSCCCCCTTCCSSCCCCCCSCCSEEEEEEEEC--S
T ss_pred             ----------CcccCCEEEeCCCCC-C-cccC--ceeeEEECCCCccccCCcccCCccccccCCcCCCeEEEEECCc--c
Confidence                      113357777644211 0 0111  23577777753   232222121111  1222  345555554  5


Q ss_pred             CCChHHHHHHHHHhHHhhhhhccCceEEE--EEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCc
Q psy15555        301 EKDHPLQLRAMYQLRQIISEELWDNLKLI--FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGL  378 (488)
Q Consensus       301 ~k~~~~ll~a~~~l~~~~~~~~~~~~~l~--ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad  378 (488)
                      .|..+.+++++.++.++.     |+..+.  ++|.++..     .+.+.+.+.+.|+.+++.|.|.++.+|....|+.+|
T Consensus       451 ~Ki~p~~l~~WarIL~~v-----P~s~L~l~~~g~~~g~-----~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD  520 (631)
T 3q3e_A          451 MKLNPYFLEALKAIRDRA-----KVKVHFHFALGQSNGI-----THPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD  520 (631)
T ss_dssp             TTCCHHHHHHHHHHHHHC-----SSEEEEEEEESSCCGG-----GHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred             ccCCHHHHHHHHHHHHhC-----CCcEEEEEecCCCchh-----hHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence            799999999999999988     776654  35643211     133334455677878999999999999999999999


Q ss_pred             EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceec------cCCCccccce-ecCCHHHHHHHHHHHHccCHHHHH
Q psy15555        379 IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI------EDPETCRNGF-LACDEVEYAQTIKLILHLSQDTKT  451 (488)
Q Consensus       379 ~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~------~~~~~~~~g~-~~~~~~~l~~~i~~ll~~~~~~~~  451 (488)
                      +++.|+.+ ++|.+.+|||++|+|||+....... +-+.      -+    -..+ ++.|.+++.+...++.+ |++.+.
T Consensus       521 IfLDpfpy-~GgtTtlEALwmGVPVVTl~G~~~a-sRvgaSlL~~~G----LpE~LIA~d~eeYv~~Av~La~-D~~~l~  593 (631)
T 3q3e_A          521 MMVNPFPF-GNTNGIIDMVTLGLVGVCKTGAEVH-EHIDEGLFKRLG----LPEWLIANTVDEYVERAVRLAE-NHQERL  593 (631)
T ss_dssp             EEECCSSS-CCSHHHHHHHHTTCCEEEECCSSHH-HHHHHHHHHHTT----CCGGGEESSHHHHHHHHHHHHH-CHHHHH
T ss_pred             EEEeCCcc-cCChHHHHHHHcCCCEEeccCCcHH-HHhHHHHHHhcC----CCcceecCCHHHHHHHHHHHhC-CHHHHH
Confidence            99998855 5699999999999999997654443 2221      12    3343 67799999999999999 999999


Q ss_pred             HHHHHHHHHH-hhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        452 RISQNAVSSV-DRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       452 ~~~~~a~~~~-~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      +++++.++.. ...-++...+++.+.|++++.+.
T Consensus       594 ~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w  627 (631)
T 3q3e_A          594 ELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAF  627 (631)
T ss_dssp             HHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHH
Confidence            9999988765 32222255666777777666544

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.56  E-value=5.8e-13  Score=131.48  Aligned_cols=156  Identities=10%  Similarity=0.006  Sum_probs=112.6

Q ss_pred             CCeEEEEeeccCCC-----CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEe
Q psy15555        288 GPVKIISVAQFRPE-----KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFK  362 (488)
Q Consensus       288 ~~~~i~~~g~~~~~-----k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~  362 (488)
                      +..++++.|+....     +.+..++++++.+          +++++++++++..      ++++      +++++|.+.
T Consensus       267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~----------~~~~v~~~g~~~~------~~l~------~~~~~v~~~  324 (441)
T 2yjn_A          267 RRRVCLTLGISSRENSIGQVSIEELLGAVGDV----------DAEIIATFDAQQL------EGVA------NIPDNVRTV  324 (441)
T ss_dssp             SCEEEEEC----------CCSTTTTHHHHHTS----------SSEEEECCCTTTT------SSCS------SCCSSEEEC
T ss_pred             CCEEEEECCCCcccccChHHHHHHHHHHHHcC----------CCEEEEEECCcch------hhhc------cCCCCEEEe
Confidence            45688889988753     7777778877543          5677777665421      1111      346789999


Q ss_pred             cCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC----CHHH
Q psy15555        363 VNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC----DEVE  434 (488)
Q Consensus       363 g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~----~~~~  434 (488)
                      +++++.   .+|..||++|..    +++.++.||+++|+|+|+.+..+    +. +.+.+.    +.|+.++    ++++
T Consensus       325 ~~~~~~---~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~----g~g~~~~~~~~~~~~  392 (441)
T 2yjn_A          325 GFVPMH---ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEF----GAGIALPVPELTPDQ  392 (441)
T ss_dssp             CSCCHH---HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHH----TSEEECCTTTCCHHH
T ss_pred             cCCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHc----CCEEEcccccCCHHH
Confidence            999764   568999999973    44578999999999999998743    32 345544    6788765    7899


Q ss_pred             HHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        435 YAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       435 l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      ++++|.++++ |++.++++++.+.+..+..+.+.+++.+.+++.
T Consensus       393 l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          393 LRESVKRVLD-DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            9999999999 999999999988877777788888877776654

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.53  E-value=8.5e-12  Score=122.48  Aligned_cols=202  Identities=9%  Similarity=-0.001  Sum_probs=123.4

Q ss_pred             ccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchh-hhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhh
Q psy15555        241 YSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTED-LKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIIS  319 (488)
Q Consensus       241 ~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~-~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~  319 (488)
                      ..+.+++.+....+.-...+  +.++..+++.+.... .........++..++++.|+.. .+..+.+.+++..+.+   
T Consensus       209 ~~~~~l~~~~~~l~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~---  282 (424)
T 2iya_A          209 APNRCIVALPRTFQIKGDTV--GDNYTFVGPTYGDRSHQGTWEGPGDGRPVLLIALGSAF-TDHLDFYRTCLSAVDG---  282 (424)
T ss_dssp             CCSSEEESSCTTTSTTGGGC--CTTEEECCCCCCCCGGGCCCCCCCSSCCEEEEECCSSS-CCCHHHHHHHHHHHTT---
T ss_pred             CCCcEEEEcchhhCCCccCC--CCCEEEeCCCCCCcccCCCCCccCCCCCEEEEEcCCCC-cchHHHHHHHHHHHhc---
Confidence            45666666554332211111  235666665432111 1111111223467788888876 3333333333333322   


Q ss_pred             hhccCceEEE-EEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHH
Q psy15555        320 EELWDNLKLI-FIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMA  398 (488)
Q Consensus       320 ~~~~~~~~l~-ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a  398 (488)
                          .+++++ ++|.+...      +++.      .+++++.+.+++++.   .+|+.||++|..    +++.+++||++
T Consensus       283 ----~~~~~~~~~g~~~~~------~~~~------~~~~~v~~~~~~~~~---~~l~~~d~~v~~----~G~~t~~Ea~~  339 (424)
T 2iya_A          283 ----LDWHVVLSVGRFVDP------ADLG------EVPPNVEVHQWVPQL---DILTKASAFITH----AGMGSTMEALS  339 (424)
T ss_dssp             ----CSSEEEEECCTTSCG------GGGC------SCCTTEEEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHH
T ss_pred             ----CCcEEEEEECCcCCh------HHhc------cCCCCeEEecCCCHH---HHHhhCCEEEEC----CchhHHHHHHH
Confidence                356664 46765422      1111      246789999999654   689999998863    33478999999


Q ss_pred             cCCcEEEeCCCC----CccceeccCCCccccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHH
Q psy15555        399 AGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFK  470 (488)
Q Consensus       399 ~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~  470 (488)
                      +|+|+|+.+..+    +. +.+.+.    +.|+.++    +.++++++|.++++ |++.++++++.+.+..+....+..+
T Consensus       340 ~G~P~i~~p~~~dQ~~na-~~l~~~----g~g~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~  413 (424)
T 2iya_A          340 NAVPMVAVPQIAEQTMNA-ERIVEL----GLGRHIPRDQVTAEKLREAVLAVAS-DPGVAERLAAVRQEIREAGGARAAA  413 (424)
T ss_dssp             TTCCEEECCCSHHHHHHH-HHHHHT----TSEEECCGGGCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             cCCCEEEecCccchHHHH-HHHHHC----CCEEEcCcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHhcCcHHHHH
Confidence            999999988742    22 334444    6777765    88999999999999 9988888888777665555556666


Q ss_pred             HHHHHHH
Q psy15555        471 NGFLTFT  477 (488)
Q Consensus       471 ~~~~~~~  477 (488)
                      +.+++++
T Consensus       414 ~~i~~~~  420 (424)
T 2iya_A          414 DILEGIL  420 (424)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6555544

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.46  E-value=3.1e-12  Score=124.56  Aligned_cols=158  Identities=10%  Similarity=0.010  Sum_probs=102.4

Q ss_pred             CCCeEEEEeeccCCCCC-hHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFRPEKD-HPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~-~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ++..+++..|+....++ ...+.+++..+.+       .+..+++.+.+...+            ....+++++.+.+++
T Consensus       236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-------~~~~~v~~~~~~~~~------------~~~~~~~~v~~~~~~  296 (400)
T 4amg_A          236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-------VDAEFVLTLGGGDLA------------LLGELPANVRVVEWI  296 (400)
T ss_dssp             TCCEEEECCCSCC--CCSSSTTHHHHHHGGG-------SSSEEEEECCTTCCC------------CCCCCCTTEEEECCC
T ss_pred             CCcEEEEeCCcccccCccHHHHHHHHHHhhc-------cCceEEEEecCcccc------------ccccCCCCEEEEeec
Confidence            45567777888765433 3334444444432       356666666543221            112357899999999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecCCHHHHHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLACDEVEYAQTIKLI  442 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~~~~~l~~~i~~l  442 (488)
                      |+.   .+|..+|+||.    .++..++.||+++|+|+|+.+..+..   .+.+++.    +.|..+++.+..+++|.++
T Consensus       297 p~~---~lL~~~~~~v~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~----G~g~~l~~~~~~~~al~~l  365 (400)
T 4amg_A          297 PLG---ALLETCDAIIH----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL----GIGFDAEAGSLGAEQCRRL  365 (400)
T ss_dssp             CHH---HHHTTCSEEEE----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH----TSEEECCTTTCSHHHHHHH
T ss_pred             CHH---HHhhhhhheec----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC----CCEEEcCCCCchHHHHHHH
Confidence            755   56789999885    34456899999999999997764421   1334444    5788887767778899999


Q ss_pred             HccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Q psy15555        443 LHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLT  475 (488)
Q Consensus       443 l~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~  475 (488)
                      ++ |++.+++.++-+.+..+.-+....++.+++
T Consensus       366 L~-d~~~r~~a~~l~~~~~~~~~~~~~a~~le~  397 (400)
T 4amg_A          366 LD-DAGLREAALRVRQEMSEMPPPAETAAXLVA  397 (400)
T ss_dssp             HH-CHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred             Hc-CHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            99 998888777766665555566666666554

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.28  E-value=1.2e-09  Score=113.32  Aligned_cols=181  Identities=12%  Similarity=0.089  Sum_probs=139.4

Q ss_pred             CCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-CcEEEecC
Q psy15555        286 TDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-NNVEFKVN  364 (488)
Q Consensus       286 ~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-~~v~~~g~  364 (488)
                      +++.++++++.++  .|--..+++++.++.++.     |+.+|++.....     ...+.+++.+++.|+. ++++|.+.
T Consensus       520 p~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~v-----P~S~L~Ll~~~~-----~~~~~l~~~~~~~gi~~~r~~f~~~  587 (723)
T 4gyw_A          520 PEDAIVYCNFNQL--YKIDPSTLQMWANILKRV-----PNSVLWLLRFPA-----VGEPNIQQYAQNMGLPQNRIIFSPV  587 (723)
T ss_dssp             CTTSEEEECCSCG--GGCCHHHHHHHHHHHHHC-----SSEEEEEEETTG-----GGHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred             CCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhC-----CCCeEEEEeCcH-----HHHHHHHHHHHhcCCCcCeEEECCC
Confidence            3455666665554  577788999999999998     899998887653     2236788888898885 67999999


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc----cceeccCCCccccceecCCHHHHHHHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK----MDIVIEDPETCRNGFLACDEVEYAQTIK  440 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~----~eiv~~~~~~~~~g~~~~~~~~l~~~i~  440 (488)
                      .+.+|....|+.+|+++-+-- -++|.+.+||+.+|+|||+-......    ..++...   +-.-+++.|.++..+...
T Consensus       588 ~~~~~~l~~~~~~Di~LDt~p-~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~---gl~e~ia~~~~~Y~~~a~  663 (723)
T 4gyw_A          588 APKEEHVRRGQLADVCLDTPL-CNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL---GCLELIAKNRQEYEDIAV  663 (723)
T ss_dssp             CCHHHHHHHGGGCSEEECCSS-SCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH---TCGGGBCSSHHHHHHHHH
T ss_pred             CCHHHHHHHhCCCeEEeCCCC-cCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc---CCcccccCCHHHHHHHHH
Confidence            999999999999999997643 46688999999999999996532221    1122221   012345679999999999


Q ss_pred             HHHccCHHHHHHHHHHHHHHH---hhcCHHHHHHHHHHHHHHhhhh
Q psy15555        441 LILHLSQDTKTRISQNAVSSV---DRFSMEEFKNGFLTFTQPLFKV  483 (488)
Q Consensus       441 ~ll~~~~~~~~~~~~~a~~~~---~~~s~~~~~~~~~~~~~~~~~~  483 (488)
                      ++.+ |++.+.++.++-++..   .-|+.+.+++.+++.|+++-+.
T Consensus       664 ~la~-d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r  708 (723)
T 4gyw_A          664 KLGT-DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH  708 (723)
T ss_dssp             HHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhc-CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence            9999 9999999998877665   3589999999999999987654

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.28  E-value=5.2e-10  Score=109.32  Aligned_cols=153  Identities=10%  Similarity=-0.023  Sum_probs=101.4

Q ss_pred             CCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +..++++.|+.. ..+..+.++++++.+          +.+++++ |.+...        .      ..+++++.+.+++
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----------~~~~v~~~g~~~~~--------~------~~~~~~v~~~~~~  293 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----------GRRVILSRGWADLV--------L------PDDGADCFAIGEV  293 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHT----------TCCEEECTTCTTCC--------C------SSCGGGEEECSSC
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHC----------CCeEEEEeCCCccc--------c------cCCCCCEEEeCcC
Confidence            356788889884 555556666666543          3455554 654311        0      1345789999999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC----CHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC----DEVEYAQ  437 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~----~~~~l~~  437 (488)
                      |+.+   ++..||++|..    ++..+++||+++|+|+|+.+..+    +. +.+++.    +.|..++    +.+++++
T Consensus       294 ~~~~---~l~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~----g~g~~~~~~~~~~~~l~~  361 (415)
T 1iir_A          294 NHQV---LFGRVAAVIHH----GGAGTTHVAARAGAPQILLPQMADQPYYA-GRVAEL----GVGVAHDGPIPTFDSLSA  361 (415)
T ss_dssp             CHHH---HGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHH----TSEEECSSSSCCHHHHHH
T ss_pred             ChHH---HHhhCCEEEeC----CChhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHC----CCcccCCcCCCCHHHHHH
Confidence            7654   57999999974    33469999999999999987754    22 334444    6777764    7899999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +|.++ + |++.++++.+.+.+.    ....-.++..+.+++++.
T Consensus       362 ~i~~l-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~  400 (415)
T 1iir_A          362 ALATA-L-TPETHARATAVAGTI----RTDGAAVAARLLLDAVSR  400 (415)
T ss_dssp             HHHHH-T-SHHHHHHHHHHHHHS----CSCHHHHHHHHHHHHHHT
T ss_pred             HHHHH-c-CHHHHHHHHHHHHHH----hhcChHHHHHHHHHHHHh
Confidence            99999 8 888877776666443    334444555555665554

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.27  E-value=7.4e-11  Score=114.83  Aligned_cols=155  Identities=8%  Similarity=-0.010  Sum_probs=98.8

Q ss_pred             CCCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +++.++++.|+.. ..+....+++++..+          +.+++++++.+..+             ..+.++++.+.+++
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~----------~~~vv~~~g~~~~~-------------~~~~~~~v~~~~~~  276 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ----------GRRVVLSSGWAGLG-------------RIDEGDDCLVVGEV  276 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHHT----------TCCEEEECTTTTCC-------------CSSCCTTEEEESSC
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHhC----------CCEEEEEeCCcccc-------------cccCCCCEEEecCC
Confidence            3456788888887 455555566665543          45667765443210             11336789999999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---ceeccCCCccccceecC----CHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC----DEVEYAQT  438 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~----~~~~l~~~  438 (488)
                      |.   ..++..||++|..+    +..++.||+++|+|+|+.+..+...   +.++..    +.|...+    +.+++.++
T Consensus       277 ~~---~~ll~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~----G~g~~l~~~~~~~~~l~~a  345 (404)
T 3h4t_A          277 NH---QVLFGRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL----GVGVAHDGPTPTVESLSAA  345 (404)
T ss_dssp             CH---HHHGGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH----TSEEECSSSSCCHHHHHHH
T ss_pred             CH---HHHHhhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC----CCEeccCcCCCCHHHHHHH
Confidence            65   45678999999643    3368999999999999987654311   223333    5677654    78999999


Q ss_pred             HHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        439 IKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       439 i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +.++++  ++.++++.+.+.    .+.. .-+++..+.+++++.
T Consensus       346 i~~ll~--~~~~~~~~~~~~----~~~~-~~~~~~~~~i~~~~~  382 (404)
T 3h4t_A          346 LATALT--PGIRARAAAVAG----TIRT-DGTTVAAKLLLEAIS  382 (404)
T ss_dssp             HHHHTS--HHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHH
T ss_pred             HHHHhC--HHHHHHHHHHHH----HHhh-hHHHHHHHHHHHHHh
Confidence            999985  566665555443    3322 333444444444444

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.17  E-value=5.2e-11  Score=100.92  Aligned_cols=133  Identities=13%  Similarity=0.137  Sum_probs=94.1

Q ss_pred             CCCeEEEEeeccC---CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        287 DGPVKIISVAQFR---PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       287 ~~~~~i~~~g~~~---~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                      ++..+++++|+..   +.|....+++++.++          +.+++++++++..      +         .++++|.+.+
T Consensus        20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----------~~~~~~~~g~~~~------~---------~~~~~v~~~~   74 (170)
T 2o6l_A           20 ENGVVVFSLGSMVSNMTEERANVIASALAQI----------PQKVLWRFDGNKP------D---------TLGLNTRLYK   74 (170)
T ss_dssp             TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS----------SSEEEEECCSSCC------T---------TCCTTEEEES
T ss_pred             CCCEEEEECCCCcccCCHHHHHHHHHHHHhC----------CCeEEEEECCcCc------c---------cCCCcEEEec
Confidence            3467888999885   445555566665432          4577777765421      1         2457899999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecC----CHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLAC----DEVEYA  436 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~----~~~~l~  436 (488)
                      ++++.++..+ +.||++|..    +++.+++|||++|+|+|+.+..+..   .+.+.+.    +.|+.++    +.++++
T Consensus        75 ~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~----g~g~~~~~~~~~~~~l~  145 (170)
T 2o6l_A           75 WIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR----GAAVRVDFNTMSSTDLL  145 (170)
T ss_dssp             SCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT----TSEEECCTTTCCHHHHH
T ss_pred             CCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc----CCeEEeccccCCHHHHH
Confidence            9987655443 999999973    4568999999999999999874321   1445555    6888875    789999


Q ss_pred             HHHHHHHccCHHHHHHHH
Q psy15555        437 QTIKLILHLSQDTKTRIS  454 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~  454 (488)
                      ++|.++++ |++.++++.
T Consensus       146 ~~i~~ll~-~~~~~~~a~  162 (170)
T 2o6l_A          146 NALKRVIN-DPSYKENVM  162 (170)
T ss_dssp             HHHHHHHH-CHHHHHHHH
T ss_pred             HHHHHHHc-CHHHHHHHH
Confidence            99999998 876544443

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.14  E-value=2.5e-09  Score=104.48  Aligned_cols=135  Identities=11%  Similarity=0.028  Sum_probs=90.9

Q ss_pred             CCeEEEEeeccCC---CCChHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHHHHHhcCCCCcEEEec
Q psy15555        288 GPVKIISVAQFRP---EKDHPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQDLCKHLSLENNVEFKV  363 (488)
Q Consensus       288 ~~~~i~~~g~~~~---~k~~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g  363 (488)
                      +..++++.|+...   .+....++++++.+          +.+++++ |.+..       + .      ..+++++.+.+
T Consensus       237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----------~~~~v~~~g~~~~-------~-~------~~~~~~v~~~~  292 (416)
T 1rrv_A          237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----------GRRVILSRGWTEL-------V-L------PDDRDDCFAID  292 (416)
T ss_dssp             SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----------TCCEEEECTTTTC-------C-C------SCCCTTEEEES
T ss_pred             CCeEEEecCCCCccChHHHHHHHHHHHHHC----------CCeEEEEeCCccc-------c-c------cCCCCCEEEec
Confidence            3567778888742   34444555555433          3556665 65421       1 0      23467899999


Q ss_pred             CCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cceeccCCCccccceecC----CHHHHH
Q psy15555        364 NLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDIVIEDPETCRNGFLAC----DEVEYA  436 (488)
Q Consensus       364 ~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~----~~~~l~  436 (488)
                      +++..   ++|..||++|.    .+++.++.||+++|+|+|+.+..+..   .+.+++.    +.|..++    +.++++
T Consensus       293 ~~~~~---~ll~~~d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~----g~g~~~~~~~~~~~~l~  361 (416)
T 1rrv_A          293 EVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL----GIGVAHDGPTPTFESLS  361 (416)
T ss_dssp             SCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH----TSEEECSSSCCCHHHHH
T ss_pred             cCChH---HHhccCCEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC----CCccCCCCCCCCHHHHH
Confidence            99754   56799999997    34456999999999999998764321   1234444    5777653    789999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHH
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVS  459 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~  459 (488)
                      ++|.++ . |++.++++++.+++
T Consensus       362 ~~i~~l-~-~~~~~~~~~~~~~~  382 (416)
T 1rrv_A          362 AALTTV-L-APETRARAEAVAGM  382 (416)
T ss_dssp             HHHHHH-T-SHHHHHHHHHHTTT
T ss_pred             HHHHHh-h-CHHHHHHHHHHHHH
Confidence            999999 8 98877777765543

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.02  E-value=9.7e-08  Score=96.80  Aligned_cols=238  Identities=11%  Similarity=0.017  Sum_probs=161.8

Q ss_pred             HHHhcccCEEEEcChhHHHHHHH------HhccCCceEEEcCCCCchhhh----cc------------------------
Q psy15555        236 SHVGKYSDIIMVNSSWTEEHVIQ------LWNCQLKTYKLYPPCDTEDLK----KI------------------------  281 (488)
Q Consensus       236 ~~~~~~~d~ii~~s~~~~~~~~~------~~~~~~k~~vi~~~~d~~~~~----~~------------------------  281 (488)
                      ...+..++.|-.+|+...+.+++      .-..+.++.-+-||+++..+.    |.                        
T Consensus       408 ~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~  487 (796)
T 1l5w_A          408 NLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLE  487 (796)
T ss_dssp             HHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGG
T ss_pred             HHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHH
Confidence            34567789999999999988864      112345788889999765441    10                        


Q ss_pred             ---CC----------------------------CCCCCCeEEEEeeccCCCCChHH-HHHHHHHhHHhhhh--hccCceE
Q psy15555        282 ---TH----------------------------SKTDGPVKIISVAQFRPEKDHPL-QLRAMYQLRQIISE--ELWDNLK  327 (488)
Q Consensus       282 ---~~----------------------------~~~~~~~~i~~~g~~~~~k~~~~-ll~a~~~l~~~~~~--~~~~~~~  327 (488)
                         ..                            ...++.+.++++.|+...|+.++ ++..+.++.+-..+  ....+++
T Consensus       488 ~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q  567 (796)
T 1l5w_A          488 KFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRV  567 (796)
T ss_dssp             GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEE
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeE
Confidence               00                            02356789999999999999999 78887777642111  0113689


Q ss_pred             EEEEecCCCCCcHHHHHHHHHHHHhc--------CCCC--cEEEecCCChHHHHHHHHhCcEEEEcCC--CCcCCccHHH
Q psy15555        328 LIFIGSTRNEEDEVCVKDMQDLCKHL--------SLEN--NVEFKVNLPYEDMKKEFSEGLIGLHAMW--NEHFGIGIVE  395 (488)
Q Consensus       328 l~ivG~~~~~~~~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s~--~e~~g~~~lE  395 (488)
                      +++.|.+....  +..+.+-+++.+.        .+++  +|.|+...+..--..++.+||+++.+|.  .|..|.+-+=
T Consensus       568 ~If~GKA~P~y--~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MK  645 (796)
T 1l5w_A          568 FLFGAKAAPGY--YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK  645 (796)
T ss_dssp             EEEECCCCTTC--HHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred             EEEEecCChhH--HHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHH
Confidence            99999774332  2223333333222        3455  7999888777888889999999999998  9999999999


Q ss_pred             HHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHH------HHccCHHHHHHHHHHHHHHHhhcCHHH
Q psy15555        396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKL------ILHLSQDTKTRISQNAVSSVDRFSMEE  468 (488)
Q Consensus       396 a~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~------ll~~~~~~~~~~~~~a~~~~~~~s~~~  468 (488)
                      +|..|.+.|++-.|.+. |+.+.-  ..++|+++. +++++.+.-..      +...++ ..+++-+++..  ..|||+.
T Consensus       646 am~NGaL~iGtLDGanv-Ei~e~v--G~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~--g~fs~~~  719 (796)
T 1l5w_A          646 LALNGALTVGTLDGANV-EIAEKV--GEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES--GKYSDGD  719 (796)
T ss_dssp             HHHTTCEEEECSCTTHH-HHHHHH--CGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH--TTTTTTC
T ss_pred             HHHcCCeeecCcCCeee-ehhhcc--CCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc--CCCCCCc
Confidence            99999999988777775 776441  226899987 77776633222      222144 33333333332  7899877


Q ss_pred             HHHHHHHHHHHhhh
Q psy15555        469 FKNGFLTFTQPLFK  482 (488)
Q Consensus       469 ~~~~~~~~~~~~~~  482 (488)
                      - +++.++|++++.
T Consensus       720 ~-~~y~~Ly~~L~~  732 (796)
T 1l5w_A          720 K-HAFDQMLHSIGK  732 (796)
T ss_dssp             T-TTTHHHHHHTST
T ss_pred             H-HHHHHHHHHHhc
Confidence            4 678888888754

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=98.92  E-value=1.3e-07  Score=95.79  Aligned_cols=238  Identities=11%  Similarity=0.006  Sum_probs=157.5

Q ss_pred             HHHhcccCEEEEcChhHHHHHHH-Hh-----ccCCceEEEcCCCCchhh----hcc------------------------
Q psy15555        236 SHVGKYSDIIMVNSSWTEEHVIQ-LW-----NCQLKTYKLYPPCDTEDL----KKI------------------------  281 (488)
Q Consensus       236 ~~~~~~~d~ii~~s~~~~~~~~~-~~-----~~~~k~~vi~~~~d~~~~----~~~------------------------  281 (488)
                      ...+..++.|-.+|+...+.+++ .+     ..+.++.-+-||+++..+    .|.                        
T Consensus       397 ~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l  476 (796)
T 2c4m_A          397 WIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKL  476 (796)
T ss_dssp             HHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGG
T ss_pred             HHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHH
Confidence            34567789999999999988874 11     124578888899876544    110                        


Q ss_pred             ----CC----------------------------CCCCCCeEEEEeeccCCCCChHH-HHHHHHHhHH--hhhhhccCce
Q psy15555        282 ----TH----------------------------SKTDGPVKIISVAQFRPEKDHPL-QLRAMYQLRQ--IISEELWDNL  326 (488)
Q Consensus       282 ----~~----------------------------~~~~~~~~i~~~g~~~~~k~~~~-ll~a~~~l~~--~~~~~~~~~~  326 (488)
                          ..                            ...++.+.++++.|+...|+.++ ++..+.++.+  +.++....++
T Consensus       477 ~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~  556 (796)
T 2c4m_A          477 RSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPAR  556 (796)
T ss_dssp             GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCE
T ss_pred             HhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCe
Confidence                00                            02346789999999999999999 7888777764  2110011268


Q ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHhc--------CCCC--cEEEecCCChHHHHHHHHhCcEEEEcCC--CCcCCccHH
Q psy15555        327 KLIFIGSTRNEEDEVCVKDMQDLCKHL--------SLEN--NVEFKVNLPYEDMKKEFSEGLIGLHAMW--NEHFGIGIV  394 (488)
Q Consensus       327 ~l~ivG~~~~~~~~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s~--~e~~g~~~l  394 (488)
                      ++++.|.+....  +..+.+-+++...        .+++  +|.|+...+..--..++.+||+++.+|.  .|..|.+-+
T Consensus       557 q~If~GKA~P~y--~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~M  634 (796)
T 2c4m_A          557 TVIFGAKAAPGY--VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNM  634 (796)
T ss_dssp             EEEEECCCCTTC--HHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHH
T ss_pred             EEEEEecCCHhH--HHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence            999999774332  2223333333222        3456  7999888777888889999999999998  999999999


Q ss_pred             HHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHH-----HHccCHHHHHHHHHHHHHHHhhcCHHH
Q psy15555        395 ECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKL-----ILHLSQDTKTRISQNAVSSVDRFSMEE  468 (488)
Q Consensus       395 Ea~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~-----ll~~~~~~~~~~~~~a~~~~~~~s~~~  468 (488)
                      =+|..|.+.|++-.|.+. |+.+.-  +.++|+++. +.++..+....     +...++ ..+++-+++..  ..|||+.
T Consensus       635 Kam~NGaL~iGtLDGanv-Ei~e~v--G~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~~~~--g~fs~~~  708 (796)
T 2c4m_A          635 KFMMNGALTLGTMDGANV-EIVDSV--GEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDALDN--GTLNDNN  708 (796)
T ss_dssp             HHHHTTCEEEEESSTHHH-HHHHHH--CGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHTTTS--SSSCCTT
T ss_pred             HHHHcCCeEEeccCCeEe-ehhhhc--CCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHHHHc--CCCCCCC
Confidence            999999999988777775 765441  226899986 33433332222     111133 12222222211  7788876


Q ss_pred             HHHHHHHHHHHhhh
Q psy15555        469 FKNGFLTFTQPLFK  482 (488)
Q Consensus       469 ~~~~~~~~~~~~~~  482 (488)
                      - +++.+++++++.
T Consensus       709 ~-~~y~~Ly~~L~~  721 (796)
T 2c4m_A          709 S-GLFYDLKHSLIH  721 (796)
T ss_dssp             C-CHHHHHHHHHHS
T ss_pred             H-HHHHHHHHHHHh
Confidence            5 678888888764

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.75  E-value=1.5e-07  Score=85.42  Aligned_cols=142  Identities=13%  Similarity=0.003  Sum_probs=84.7

Q ss_pred             ccCEEEEcChhHH-HHHHHHhccCCceEEEcC---CCCchhhhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHH
Q psy15555        241 YSDIIMVNSSWTE-EHVIQLWNCQLKTYKLYP---PCDTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQ  316 (488)
Q Consensus       241 ~~d~ii~~s~~~~-~~~~~~~~~~~k~~vi~~---~~d~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~  316 (488)
                      .+|.++-++.... ..+....+ +......++   ++..+............+.+++++|..++..-...++   +.+.+
T Consensus       107 ~~Dllin~~~~~~~~~Y~~~~p-~~~~~l~G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~GG~d~~~l~~~vl---~~L~~  182 (282)
T 3hbm_A          107 HCDILLNVNAYAKASDYEGLVP-FKCEVRCGFSYALIREEFYQEAKENRKKKYDFFICMGGTDIKNLSLQIA---SELPK  182 (282)
T ss_dssp             CCSEEEECSTTCCGGGGTTTCC--CCEEEESGGGCCCCHHHHHHTTCCCCCCEEEEEECCSCCTTCHHHHHH---HHSCT
T ss_pred             cCCEEEeCCcccchhhccccCC-CCCeEeeCCcccccCHHHHHhhhhccccCCeEEEEECCCchhhHHHHHH---HHhhc
Confidence            4799998875432 11221111 112235555   4554443322221112345667788765443233333   33332


Q ss_pred             hhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHH
Q psy15555        317 IISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVEC  396 (488)
Q Consensus       317 ~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa  396 (488)
                      .      .+ ..++.|.+.     ...+++++.+++.   .++.+.+++  +++.++|+.||+.|..     +|.++.|+
T Consensus       183 ~------~~-i~vv~G~~~-----~~~~~l~~~~~~~---~~v~v~~~~--~~m~~~m~~aDlvI~~-----gG~T~~E~  240 (282)
T 3hbm_A          183 T------KI-ISIATSSSN-----PNLKKLQKFAKLH---NNIRLFIDH--ENIAKLMNESNKLIIS-----ASSLVNEA  240 (282)
T ss_dssp             T------SC-EEEEECTTC-----TTHHHHHHHHHTC---SSEEEEESC--SCHHHHHHTEEEEEEE-----SSHHHHHH
T ss_pred             C------CC-EEEEECCCc-----hHHHHHHHHHhhC---CCEEEEeCH--HHHHHHHHHCCEEEEC-----CcHHHHHH
Confidence            1      23 345667664     2347777766543   379999999  8999999999998873     35799999


Q ss_pred             HHcCCcEEEeCC
Q psy15555        397 MAAGLIMIAHKS  408 (488)
Q Consensus       397 ~a~G~PvI~~~~  408 (488)
                      +++|+|.|..+.
T Consensus       241 ~~~g~P~i~ip~  252 (282)
T 3hbm_A          241 LLLKANFKAICY  252 (282)
T ss_dssp             HHTTCCEEEECC
T ss_pred             HHcCCCEEEEeC
Confidence            999999999765

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.65  E-value=0.00026  Score=69.65  Aligned_cols=356  Identities=11%  Similarity=-0.011  Sum_probs=169.1

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCC--hhHHHHHhhhhcccccCCCeeEEEEeeccce
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDAS--PSEIIKRAHQRFNIVLPDQVINFVYLYRRKF  129 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  129 (488)
                      +++|+++. +  ...|--.-+..+++.|.++.||++|.++++.....  ..........     .... +.+..++....
T Consensus         9 ~~~vv~~p-~--p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~-----~~~~-i~~~~lp~~~~   79 (463)
T 2acv_A            9 NSELIFIP-A--PGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA-----SQPQ-IQLIDLPEVEP   79 (463)
T ss_dssp             CEEEEEEC-C--SSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC-----SCTT-EEEEECCCCCC
T ss_pred             CCEEEEEc-C--cccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc-----CCCC-ceEEECCCCCC
Confidence            36888763 2  23356678899999999986678888887764321  1222222100     1123 66666654321


Q ss_pred             eec---cCchhHHHHHHHH-HHHHHHHHHhhh---cCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHH
Q psy15555        130 VEA---SLYPYFTLLGQSI-GSMILGVEALLS---FQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVA  202 (488)
Q Consensus       130 ~~~---~~~~~~~~~~~~~-~~~~~~~~~l~~---~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~  202 (488)
                      ...   ......  +...+ .....+.++++.   .+||+||.....+....++. ..++|.+.+.-.+........+..
T Consensus        80 ~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~-~lgiP~v~~~~~~~~~~~~~~~~~  156 (463)
T 2acv_A           80 PPQELLKSPEFY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGN-EFGIPSYLFLTSNVGFLSLMLSLK  156 (463)
T ss_dssp             CCGGGGGSHHHH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHH-HTTCCEEEEESSCHHHHHHHHHGG
T ss_pred             CcccccCCccHH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHH-HcCCCEEEEeCchHHHHHHHHHHH
Confidence            110   001111  11111 112234555655   68997775443333444444 678997775543321111110111


Q ss_pred             hhh--hcccC-c------ccccc-Cccch-----hhh--HHHHHHHHHHHHHHhcccCEEEEcChhHHH-HHHHHhcc--
Q psy15555        203 RRV--ITHNN-S------QRVAN-NPILT-----SFK--LFYYKVFALLYSHVGKYSDIIMVNSSWTEE-HVIQLWNC--  262 (488)
Q Consensus       203 ~~~--~~~~~-~------~~~~~-~~~~~-----~~~--~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~-~~~~~~~~--  262 (488)
                      ...  ..+.. .      ..... +....     ...  ...+..+.... ..++.++.+++.|-...+ .....+..  
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~nt~~ele~~~~~~l~~~~  235 (463)
T 2acv_A          157 NRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLA-ERFRDTKGIIVNTFSDLEQSSIDALYDHD  235 (463)
T ss_dssp             GSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHH-HHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred             hhcccCCCCCccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHH-HhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence            000  00000 0      00000 00000     000  00111111111 234678888877644333 22222211  


Q ss_pred             --CCceEEEcCCCCchh-h--h---cc-------CCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceE
Q psy15555        263 --QLKTYKLYPPCDTED-L--K---KI-------THSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLK  327 (488)
Q Consensus       263 --~~k~~vi~~~~d~~~-~--~---~~-------~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~  327 (488)
                        ..++..+++...... .  .   ..       -....++..+++..|+....-+.+.+.+.+..+.+.       +.+
T Consensus       236 ~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~-------~~~  308 (463)
T 2acv_A          236 EKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS-------GVR  308 (463)
T ss_dssp             TTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH-------TCE
T ss_pred             ccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC-------CCc
Confidence              235777765432110 0  0   00       011223456777778776222334444444444332       456


Q ss_pred             EEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH--hCcEEEEcCCCCcCCccHHHHHHcCCcEEE
Q psy15555        328 LIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS--EGLIGLHAMWNEHFGIGIVECMAAGLIMIA  405 (488)
Q Consensus       328 l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~--~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~  405 (488)
                      ++++-+....   ...+.+.+....   ++++...+++|+.   .+|+  .+|+||.    -++..+++|++++|+|+|+
T Consensus       309 ~l~~~~~~~~---~l~~~~~~~~~~---~~~~~v~~w~pq~---~vL~h~~~~~fvt----h~G~~s~~Eal~~GvP~i~  375 (463)
T 2acv_A          309 FLWSNSAEKK---VFPEGFLEWMEL---EGKGMICGWAPQV---EVLAHKAIGGFVS----HCGWNSILESMWFGVPILT  375 (463)
T ss_dssp             EEEECCCCGG---GSCTTHHHHHHH---HCSEEEESSCCHH---HHHHSTTEEEEEE----CCCHHHHHHHHHTTCCEEE
T ss_pred             EEEEECCCcc---cCChhHHHhhcc---CCCEEEEccCCHH---HHhCCCccCeEEe----cCCchhHHHHHHcCCCeee
Confidence            6655432100   000122222210   2468888999764   4576  5777775    3445789999999999999


Q ss_pred             eCCCCCcc---ce-eccCCCccccceec---------C-CHHHHHHHHHHHHc
Q psy15555        406 HKSGGPKM---DI-VIEDPETCRNGFLA---------C-DEVEYAQTIKLILH  444 (488)
Q Consensus       406 ~~~~~~~~---ei-v~~~~~~~~~g~~~---------~-~~~~l~~~i~~ll~  444 (488)
                      -+..+...   .. ++..    +.|+.+         . +.+++.++|.++++
T Consensus       376 ~P~~~dQ~~Na~~lv~~~----g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~  424 (463)
T 2acv_A          376 WPIYAEQQLNAFRLVKEW----GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMD  424 (463)
T ss_dssp             CCCSTTHHHHHHHHHHTS----CCEEESCSSCCTTCCCCCHHHHHHHHHHHTC
T ss_pred             ccchhhhHHHHHHHHHHc----CeEEEEecccCCCCccccHHHHHHHHHHHHh
Confidence            87743210   23 3444    577766         2 67899999999996

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.62  E-value=3.8e-05  Score=75.41  Aligned_cols=192  Identities=10%  Similarity=-0.024  Sum_probs=106.1

Q ss_pred             HhcccCEEEEcChhHHHH-----HHHHhccCCceEEEcCCCCchh---hh------ccCCCCCCCCeEEEEeeccCCCCC
Q psy15555        238 VGKYSDIIMVNSSWTEEH-----VIQLWNCQLKTYKLYPPCDTED---LK------KITHSKTDGPVKIISVAQFRPEKD  303 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~-----~~~~~~~~~k~~vi~~~~d~~~---~~------~~~~~~~~~~~~i~~~g~~~~~k~  303 (488)
                      ..+.++.++++|-...+.     +....   .++..+++......   ..      ..-....++..+++..|+.... .
T Consensus       210 ~~~~~~~vl~ns~~~le~~~~~~~~~~~---~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~-~  285 (456)
T 2c1x_A          210 VLPKATAVFINSFEELDDSLTNDLKSKL---KTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP-P  285 (456)
T ss_dssp             HGGGSSCEEESSCGGGCHHHHHHHHHHS---SCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCC-C
T ss_pred             hhhhCCEEEECChHHHhHHHHHHHHhcC---CCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccC-C
Confidence            346789999998654433     23322   24666654211000   00      0001122345677777876643 3


Q ss_pred             hHHHHHHHHHhHHhhhhhccCceEEEEE-ecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH--hCcEE
Q psy15555        304 HPLQLRAMYQLRQIISEELWDNLKLIFI-GSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS--EGLIG  380 (488)
Q Consensus       304 ~~~ll~a~~~l~~~~~~~~~~~~~l~iv-G~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~--~ad~~  380 (488)
                      .+.+.+.+..+.+.       +.+++++ |.....   ...+.+.+..     ++++.+.+++|+.   .+++  .+|+|
T Consensus       286 ~~~~~~~~~~l~~~-------~~~~lw~~~~~~~~---~l~~~~~~~~-----~~~~~v~~w~pq~---~vL~h~~~~~f  347 (456)
T 2c1x_A          286 PAEVVALSEALEAS-------RVPFIWSLRDKARV---HLPEGFLEKT-----RGYGMVVPWAPQA---EVLAHEAVGAF  347 (456)
T ss_dssp             HHHHHHHHHHHHHH-------TCCEEEECCGGGGG---GSCTTHHHHH-----TTTEEEESCCCHH---HHHTSTTEEEE
T ss_pred             HHHHHHHHHHHHhc-------CCeEEEEECCcchh---hCCHHHHhhc-----CCceEEecCCCHH---HHhcCCcCCEE
Confidence            34444444444332       3455543 432100   0001122211     3578899999764   5688  66777


Q ss_pred             EEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc----cceeccCCCccccceecC----CHHHHHHHHHHHHccCHHHHHH
Q psy15555        381 LHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK----MDIVIEDPETCRNGFLAC----DEVEYAQTIKLILHLSQDTKTR  452 (488)
Q Consensus       381 v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~----~eiv~~~~~~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~  452 (488)
                      |.    -++..+++|++++|+|+|+-+..+..    ..+.+..    +.|..++    +.+++.+++.++++ +++ .++
T Consensus       348 vt----h~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~----g~g~~l~~~~~~~~~l~~~i~~ll~-~~~-~~~  417 (456)
T 2c1x_A          348 VT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL----EIGVRIEGGVFTKSGLMSCFDQILS-QEK-GKK  417 (456)
T ss_dssp             EE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS----CCEEECGGGSCCHHHHHHHHHHHHH-SHH-HHH
T ss_pred             Ee----cCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHh----CeEEEecCCCcCHHHHHHHHHHHHC-CCc-HHH
Confidence            75    34457899999999999998764321    1122221    4566554    78999999999998 775 455


Q ss_pred             HHHHHHHHH
Q psy15555        453 ISQNAVSSV  461 (488)
Q Consensus       453 ~~~~a~~~~  461 (488)
                      +.+++++..
T Consensus       418 ~r~~a~~l~  426 (456)
T 2c1x_A          418 LRENLRALR  426 (456)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666655543

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=98.56  E-value=2.8e-06  Score=86.56  Aligned_cols=194  Identities=12%  Similarity=0.040  Sum_probs=133.8

Q ss_pred             HHhcccCEEEEcChhHHHHHHH-Hhc-----cCCceEEEcCCCCchhh----hc--------------------------
Q psy15555        237 HVGKYSDIIMVNSSWTEEHVIQ-LWN-----CQLKTYKLYPPCDTEDL----KK--------------------------  280 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~~~~~~~-~~~-----~~~k~~vi~~~~d~~~~----~~--------------------------  280 (488)
                      ..+..++.|-.+|+...+.+++ .++     .+.++.-+-||+++..+    .|                          
T Consensus       433 lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~  512 (824)
T 2gj4_A          433 LCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLS  512 (824)
T ss_dssp             HHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGG
T ss_pred             HHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHh
Confidence            4667889999999998888863 111     24578888898865433    00                          


Q ss_pred             ------c-----C------C------------CCCCCCeEEEEeeccCCCCChHHH-HHHHHHhHH--hhhhhccCceEE
Q psy15555        281 ------I-----T------H------------SKTDGPVKIISVAQFRPEKDHPLQ-LRAMYQLRQ--IISEELWDNLKL  328 (488)
Q Consensus       281 ------~-----~------~------------~~~~~~~~i~~~g~~~~~k~~~~l-l~a~~~l~~--~~~~~~~~~~~l  328 (488)
                            .     .      .            ...++.+.++++.|+...|+.+++ +..+.++.+  +.++....+.++
T Consensus       513 y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~  592 (824)
T 2gj4_A          513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTV  592 (824)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEE
Confidence                  0     0      0            023567899999999999999987 777777752  221101116799


Q ss_pred             EEEecCCCCCcHHHHHH----HHHHHHhc----CCCC--cEEEecCCChHHHHHHHHhCcEEEEcCC--CCcCCccHHHH
Q psy15555        329 IFIGSTRNEEDEVCVKD----MQDLCKHL----SLEN--NVEFKVNLPYEDMKKEFSEGLIGLHAMW--NEHFGIGIVEC  396 (488)
Q Consensus       329 ~ivG~~~~~~~~~~~~~----l~~~~~~~----~l~~--~v~~~g~~~~~el~~~~~~ad~~v~~s~--~e~~g~~~lEa  396 (488)
                      ++.|.+....  +..+.    +.+.++..    .+++  +|.|+...+..--..++..||+++.+|.  .|..|.+-+=+
T Consensus       593 If~GKA~P~y--~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKa  670 (824)
T 2gj4_A          593 MIGGKAAPGY--HMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKF  670 (824)
T ss_dssp             EEECCCCTTC--HHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHH
T ss_pred             EEEEeCCHhH--HHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHH
Confidence            9999774332  22233    33333322    1245  6888888777888889999999999998  99999999999


Q ss_pred             HHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHH
Q psy15555        397 MAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEY  435 (488)
Q Consensus       397 ~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l  435 (488)
                      |..|.+.|++-.|.+. |+.++-  +.++||++. .++++
T Consensus       671 mlNGaLtigtlDGanv-Ei~e~v--G~~Ngf~FG~~~~ev  707 (824)
T 2gj4_A          671 MLNGALTIGTMDGANV-EMAEEA--GEENFFIFGMRVEDV  707 (824)
T ss_dssp             HHTTCEEEECSCTTHH-HHHHHH--CGGGSEECSCCHHHH
T ss_pred             HHcCceEEEEecCccc-hhhhcc--CCCCEEEeCCcHHHH
Confidence            9999999998877775 665420  126889887 55555

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.52  E-value=0.00083  Score=65.42  Aligned_cols=367  Identities=11%  Similarity=0.003  Sum_probs=173.8

Q ss_pred             ccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeecccee-
Q psy15555         52 LKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFV-  130 (488)
Q Consensus        52 ~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-  130 (488)
                      +.+|+++- +  ...|--.-+.+|++.|.++|+.+.|.++++...      ......... .-... +.+..++....- 
T Consensus        13 ~~hvv~~P-~--p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~------~~~~~~~~~-~~~~~-i~~~~ipdglp~~   81 (454)
T 3hbf_A           13 LLHVAVLA-F--PFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTT------NDTLFSRSN-EFLPN-IKYYNVHDGLPKG   81 (454)
T ss_dssp             CCEEEEEC-C--CSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHH------HHHSCSSSS-CCCTT-EEEEECCCCCCTT
T ss_pred             CCEEEEEc-C--CcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHH------HHhhhcccc-cCCCC-ceEEecCCCCCCC
Confidence            46777753 2  223566788999999999976688887775311      111100000 00123 666666532110 


Q ss_pred             -ec--cCchhHHHHHH-HHHHHHH-HHHHhhh--cCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHH-
Q psy15555        131 -EA--SLYPYFTLLGQ-SIGSMIL-GVEALLS--FQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVA-  202 (488)
Q Consensus       131 -~~--~~~~~~~~~~~-~~~~~~~-~~~~l~~--~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~-  202 (488)
                       ..  .....+..+.. ....+.. +.+++..  .+||.||.....+....+++ ..|+|.+.+.-.+........... 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~-~lgIP~~~f~t~~a~~~~~~~~~~~  160 (454)
T 3hbf_A           82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAE-EMHAKWVPLWTAGPHSLLTHVYTDL  160 (454)
T ss_dssp             CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHH-HTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHH-HhCCCEEEEeCccHHHHHHHHhhHH
Confidence             00  00111111111 1111111 1222222  36887765544454555555 779998876644332111111000 


Q ss_pred             --hh-h--hcccCccc--------cccCccchh----hhHHHHHHHHHHHHHHhcccCEEEEcChhHHHH--HHHHhccC
Q psy15555        203 --RR-V--ITHNNSQR--------VANNPILTS----FKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEH--VIQLWNCQ  263 (488)
Q Consensus       203 --~~-~--~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~--~~~~~~~~  263 (488)
                        .. .  ........        +....+.+.    ........+.... .....++.++++|-...+.  +.......
T Consensus       161 ~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~-~~~~~~~~vl~ns~~eLE~~~~~~~~~~~  239 (454)
T 3hbf_A          161 IREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMG-LELPRANAVAINSFATIHPLIENELNSKF  239 (454)
T ss_dssp             HHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHH-HHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred             HHhhcCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHH-HhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence              00 0  00000000        001111111    0111222222222 2456789999998655332  11111112


Q ss_pred             CceEEEcCCCCch--h-------hhccCCCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecC
Q psy15555        264 LKTYKLYPPCDTE--D-------LKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGST  334 (488)
Q Consensus       264 ~k~~vi~~~~d~~--~-------~~~~~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~  334 (488)
                      .++..+++-....  .       ....-....++..+++..|+.... ..+.+.+.+..+.+.       +.+++++-+.
T Consensus       240 ~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~-------~~~flw~~~~  311 (454)
T 3hbf_A          240 KLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-PPHELTALAESLEEC-------GFPFIWSFRG  311 (454)
T ss_dssp             SCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-CHHHHHHHHHHHHHH-------CCCEEEECCS
T ss_pred             CCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcC-CHHHHHHHHHHHHhC-------CCeEEEEeCC
Confidence            3566665421100  0       000001122345667777877643 344444444444332       4566665443


Q ss_pred             CCCCcHHHHHHHH-HHHHhcCCCCcEEEecCCChHHHHHHHHhCc--EEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC
Q psy15555        335 RNEEDEVCVKDMQ-DLCKHLSLENNVEFKVNLPYEDMKKEFSEGL--IGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP  411 (488)
Q Consensus       335 ~~~~~~~~~~~l~-~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad--~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~  411 (488)
                      .     .. +.+. ...+.  .++++.+.+++|+.   .+++.++  +||.    -++..+++|++++|+|+|+-+..+.
T Consensus       312 ~-----~~-~~lp~~~~~~--~~~~~~vv~w~Pq~---~vL~h~~v~~fvt----H~G~~S~~Eal~~GvP~i~~P~~~D  376 (454)
T 3hbf_A          312 D-----PK-EKLPKGFLER--TKTKGKIVAWAPQV---EILKHSSVGVFLT----HSGWNSVLECIVGGVPMISRPFFGD  376 (454)
T ss_dssp             C-----HH-HHSCTTHHHH--TTTTEEEESSCCHH---HHHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred             c-----ch-hcCCHhHHhh--cCCceEEEeeCCHH---HHHhhcCcCeEEe----cCCcchHHHHHHcCCCEecCccccc
Confidence            2     10 1111 11111  14678888999763   7788899  4553    2334689999999999999876432


Q ss_pred             cc---ceecc-CCCccccceecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q psy15555        412 KM---DIVIE-DPETCRNGFLAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       412 ~~---eiv~~-~~~~~~~g~~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~  460 (488)
                      ..   ..+.+ .    +.|..++    +.+++.+++.++++ ++ ..++++++|++.
T Consensus       377 Q~~Na~~v~~~~----g~Gv~l~~~~~~~~~l~~av~~ll~-~~-~~~~~r~~a~~l  427 (454)
T 3hbf_A          377 QGLNTILTESVL----EIGVGVDNGVLTKESIKKALELTMS-SE-KGGIMRQKIVKL  427 (454)
T ss_dssp             HHHHHHHHHTTS----CSEEECGGGSCCHHHHHHHHHHHHS-SH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh----CeeEEecCCCCCHHHHHHHHHHHHC-CC-hHHHHHHHHHHH
Confidence            10   12222 2    4666653    78999999999998 64 234455555443

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=98.30  E-value=5.8e-05  Score=70.70  Aligned_cols=133  Identities=12%  Similarity=0.052  Sum_probs=78.3

Q ss_pred             CCCeEEEEeeccCCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecC
Q psy15555        287 DGPVKIISVAQFRPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVN  364 (488)
Q Consensus       287 ~~~~~i~~~g~~~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~  364 (488)
                      +++.+.+..|.-...|...  .+.+....+.+       .+.++++.++++     +..+..++..+..   .++.+.|.
T Consensus       177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-------~~~~vvl~~g~~-----~e~~~~~~i~~~~---~~~~l~g~  241 (326)
T 2gt1_A          177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-------SGIRIKLPWGAP-----HEEERAKRLAEGF---AYVEVLPK  241 (326)
T ss_dssp             TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-------TCCEEEECCSSH-----HHHHHHHHHHTTC---TTEEECCC
T ss_pred             CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-------CCCcEEEecCCH-----HHHHHHHHHHhhC---CcccccCC
Confidence            3456677777666666654  44555555432       357777764343     1113333443332   24677888


Q ss_pred             CChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---------ceeccCCCccccceecC-CHHH
Q psy15555        365 LPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---------DIVIEDPETCRNGFLAC-DEVE  434 (488)
Q Consensus       365 ~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---------eiv~~~~~~~~~g~~~~-~~~~  434 (488)
                      .+-.|+..+++.||++|+.   ++ |..-+ |.|.|+|+|+--......         .++. +    ....+-+ ++++
T Consensus       242 ~sl~el~ali~~a~l~I~~---DS-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~-~----~~~cm~~I~~~~  311 (326)
T 2gt1_A          242 MSLEGVARVLAGAKFVVSV---DT-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCR-A----PGNELSQLTANA  311 (326)
T ss_dssp             CCHHHHHHHHHTCSEEEEE---SS-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEE-C----GGGCGGGCCHHH
T ss_pred             CCHHHHHHHHHhCCEEEec---CC-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEec-C----CcccccCCCHHH
Confidence            8889999999999999986   22 33444 777999999842111110         1111 1    1112222 7888


Q ss_pred             HHHHHHHHHc
Q psy15555        435 YAQTIKLILH  444 (488)
Q Consensus       435 l~~~i~~ll~  444 (488)
                      +.+++.++++
T Consensus       312 V~~~i~~~l~  321 (326)
T 2gt1_A          312 VKQFIEENAE  321 (326)
T ss_dssp             HHHHHHHTTT
T ss_pred             HHHHHHHHHH
Confidence            8888888876

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=98.25  E-value=6.2e-05  Score=71.18  Aligned_cols=101  Identities=13%  Similarity=0.074  Sum_probs=64.3

Q ss_pred             CCeEEEEeec-cCCCCChH--HHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcC--C-CCcEEE
Q psy15555        288 GPVKIISVAQ-FRPEKDHP--LQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLS--L-ENNVEF  361 (488)
Q Consensus       288 ~~~~i~~~g~-~~~~k~~~--~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~--l-~~~v~~  361 (488)
                      ++.+.+..|. ....|...  .+.++++.+.++       ++++++.|...     + .+..++..+..+  . .+.+.+
T Consensus       180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-------~~~vvl~g~~~-----e-~~~~~~i~~~~~~~~~~~~~~l  246 (348)
T 1psw_A          180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-------GYQVVLFGSAK-----D-HEAGNEILAALNTEQQAWCRNL  246 (348)
T ss_dssp             SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-------TCEEEECCCGG-----G-HHHHHHHHTTSCHHHHTTEEEC
T ss_pred             CcEEEEECCCCccccCCCCHHHHHHHHHHHHHC-------CCeEEEEeChh-----h-HHHHHHHHHhhhhccccceEec
Confidence            4566677776 44556654  667777666543       56788877542     1 133333333221  0 123466


Q ss_pred             ecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        362 KVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       362 ~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      .|..+-.|+..+++.||++|+..   + | .+-.|+++|+|+|+-
T Consensus       247 ~g~~sl~e~~ali~~a~l~I~~D---s-g-~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          247 AGETQLDQAVILIAACKAIVTND---S-G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             TTTSCHHHHHHHHHTSSEEEEES---S-H-HHHHHHHTTCCEEEE
T ss_pred             cCcCCHHHHHHHHHhCCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence            78888899999999999999864   2 2 233399999999983

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.24  E-value=0.00014  Score=75.99  Aligned_cols=214  Identities=8%  Similarity=-0.019  Sum_probs=122.8

Q ss_pred             hcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccC-----------CCCCCCCeEEEEeeccCCCC----
Q psy15555        239 GKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKIT-----------HSKTDGPVKIISVAQFRPEK----  302 (488)
Q Consensus       239 ~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~-----------~~~~~~~~~i~~~g~~~~~k----  302 (488)
                      .+..|.+++.|+...+.+.+.++.+ .++..++.|-....+....           -..+.++++|+|+-++....    
T Consensus       476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~  555 (729)
T 3l7i_A          476 TSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSK  555 (729)
T ss_dssp             HTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGG
T ss_pred             hccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCccccc
Confidence            4667999999999999999988876 4676666663222221110           11346789999999877542    


Q ss_pred             -----ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhC
Q psy15555        303 -----DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEG  377 (488)
Q Consensus       303 -----~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~a  377 (488)
                           ....-++.+.+...       ++..+++-+ ||         .+.+.....+..+.+.-....  .++.++|..|
T Consensus       556 ~~~~~~~~~~~~~l~~~l~-------~~~~li~r~-Hp---------~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~a  616 (729)
T 3l7i_A          556 GKYLFELKIDLDNLYKELG-------DDYVILLRM-HY---------LISNALDLSGYENFAIDVSNY--NDVSELFLIS  616 (729)
T ss_dssp             GSSCCCCTTCHHHHHHHHT-------TTEEEEECC-CH---------HHHTTCCCTTCTTTEEECTTC--SCHHHHHHTC
T ss_pred             cccccchhhHHHHHHHHcC-------CCeEEEEec-Cc---------chhccccccccCCcEEeCCCC--cCHHHHHHHh
Confidence                 11112333333221       466655544 53         111111112233445444433  6899999999


Q ss_pred             cEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceec-------cCCCccccceecCCHHHHHHHHHHHHccCHHHH
Q psy15555        378 LIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI-------EDPETCRNGFLACDEVEYAQTIKLILHLSQDTK  450 (488)
Q Consensus       378 d~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~-------~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~  450 (488)
                      |++|.-     ++-.++|++..++|||.....-  ++...       +. ...-.|-++.|.++|.++|..... ..+..
T Consensus       617 D~lITD-----ySSv~fD~~~l~kPiif~~~D~--~~Y~~~~rg~y~d~-~~~~pg~~~~~~~eL~~~i~~~~~-~~~~~  687 (729)
T 3l7i_A          617 DCLITD-----YSSVMFDYGILKRPQFFFAYDI--DKYDKGLRGFYMNY-MEDLPGPIYTEPYGLAKELKNLDK-VQQQY  687 (729)
T ss_dssp             SEEEES-----SCTHHHHHGGGCCCEEEECTTT--TTTTSSCCSBSSCT-TSSSSSCEESSHHHHHHHHTTHHH-HHHHT
T ss_pred             CEEEee-----chHHHHhHHhhCCCEEEecCCH--HHHhhccCCcccCh-hHhCCCCeECCHHHHHHHHhhhhc-cchhH
Confidence            998863     4668999999999999974321  11111       11 111356777799999999988765 33333


Q ss_pred             HHHHHHHHHHHhhcCHHHHHHHHHHHHHHh
Q psy15555        451 TRISQNAVSSVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       451 ~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~  480 (488)
                      .+..+.-.+..-.|.-...++++.+.+-+.
T Consensus       688 ~~~~~~~~~~~~~~~dg~as~ri~~~i~~~  717 (729)
T 3l7i_A          688 QEKIDAFYDRFCSVDNGKASQYIGDLIHKD  717 (729)
T ss_dssp             HHHHHHHHHHHSTTCCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCccCChHHHHHHHHHHhc
Confidence            333333333222233445556655555443

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.18  E-value=0.0027  Score=62.62  Aligned_cols=89  Identities=11%  Similarity=0.048  Sum_probs=57.9

Q ss_pred             EEEecCCChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc---cce-eccCCCccccceecC--
Q psy15555        359 VEFKVNLPYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK---MDI-VIEDPETCRNGFLAC--  430 (488)
Q Consensus       359 v~~~g~~~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~---~ei-v~~~~~~~~~g~~~~--  430 (488)
                      +...+++|+.   .+++.+++  ||.    -++..+++||+++|+|+|+-+..+-.   ... ++..    +.|..++  
T Consensus       341 ~~v~~w~Pq~---~vL~h~~v~~fvt----HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~----G~g~~l~~~  409 (480)
T 2vch_A          341 FVIPFWAPQA---QVLAHPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDI----RAALRPRAG  409 (480)
T ss_dssp             EEEESCCCHH---HHHHSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTT----CCEECCCCC
T ss_pred             EEEeCccCHH---HHhCCCCcCeEEe----cccchhHHHHHHcCCCEEeccccccchHHHHHHHHHh----CeEEEeecc
Confidence            4555699764   77898884  443    23446899999999999998774321   022 3444    5666542  


Q ss_pred             -----CHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q psy15555        431 -----DEVEYAQTIKLILHLSQDTKTRISQNAVSS  460 (488)
Q Consensus       431 -----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~  460 (488)
                           +.+++.++|.+++. ++ .-.++.++|++.
T Consensus       410 ~~~~~~~~~l~~av~~vl~-~~-~~~~~r~~a~~l  442 (480)
T 2vch_A          410 DDGLVRREEVARVVKGLME-GE-EGKGVRNKMKEL  442 (480)
T ss_dssp             TTSCCCHHHHHHHHHHHHT-ST-HHHHHHHHHHHH
T ss_pred             cCCccCHHHHHHHHHHHhc-Cc-chHHHHHHHHHH
Confidence                 67999999999997 43 223344444433

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=98.11  E-value=0.00011  Score=69.29  Aligned_cols=100  Identities=11%  Similarity=0.147  Sum_probs=66.4

Q ss_pred             CCeEEEEeeccCCCCCh--HHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDH--PLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~--~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ++.+.+..|.-.+.|..  +.+.+....+.++       +.++++.|...+.      +..++..+..+ ...+.+.|..
T Consensus       185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-------g~~vvl~g~~~e~------~~~~~i~~~~~-~~~~~l~g~~  250 (349)
T 3tov_A          185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL-------GYKTVFFGGPMDL------EMVQPVVEQME-TKPIVATGKF  250 (349)
T ss_dssp             CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-------TCEEEECCCTTTH------HHHHHHHHTCS-SCCEECTTCC
T ss_pred             CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-------CCeEEEEeCcchH------HHHHHHHHhcc-cccEEeeCCC
Confidence            45566777765566665  4566666666654       4567777754211      33444444443 2346677888


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      +-.|+..+++.||++|+.   ++ |..-+ |.++|+|+|+-
T Consensus       251 sl~e~~ali~~a~~~i~~---Ds-G~~Hl-Aaa~g~P~v~l  286 (349)
T 3tov_A          251 QLGPLAAAMNRCNLLITN---DS-GPMHV-GISQGVPIVAL  286 (349)
T ss_dssp             CHHHHHHHHHTCSEEEEE---SS-HHHHH-HHTTTCCEEEE
T ss_pred             CHHHHHHHHHhCCEEEEC---CC-CHHHH-HHhcCCCEEEE
Confidence            889999999999999985   23 33334 89999999995

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=97.69  E-value=0.0012  Score=65.15  Aligned_cols=148  Identities=14%  Similarity=0.080  Sum_probs=90.0

Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCC--CCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRN--EEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~--~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +..+++..|+... .....+.+.+..+.+       .+.+++++-+...  .+.....+.+.+..     ++++.+.+++
T Consensus       295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~-------~~~~~l~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~v~~~~  361 (482)
T 2pq6_A          295 GSVVYVNFGSTTV-MTPEQLLEFAWGLAN-------CKKSFLWIIRPDLVIGGSVIFSSEFTNEI-----ADRGLIASWC  361 (482)
T ss_dssp             TCEEEEECCSSSC-CCHHHHHHHHHHHHH-------TTCEEEEECCGGGSTTTGGGSCHHHHHHH-----TTTEEEESCC
T ss_pred             CceEEEecCCccc-CCHHHHHHHHHHHHh-------cCCcEEEEEcCCccccccccCcHhHHHhc-----CCCEEEEeec
Confidence            4567777777653 234444444444433       2466666543211  00000112333222     4689999999


Q ss_pred             ChHHHHHHHHhCcE--EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---c-eeccCCCccccceecC---CHHHHH
Q psy15555        366 PYEDMKKEFSEGLI--GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---D-IVIEDPETCRNGFLAC---DEVEYA  436 (488)
Q Consensus       366 ~~~el~~~~~~ad~--~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---e-iv~~~~~~~~~g~~~~---~~~~l~  436 (488)
                      |+.   .+++.+++  ||.    -++..++.|++++|+|+|+-+..+...   . +++..    +.|+.++   +.+++.
T Consensus       362 pq~---~~L~h~~~~~~vt----h~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~----G~g~~l~~~~~~~~l~  430 (482)
T 2pq6_A          362 PQD---KVLNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEW----EIGMEIDTNVKREELA  430 (482)
T ss_dssp             CHH---HHHTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS----CCEEECCSSCCHHHHH
T ss_pred             CHH---HHhcCCCCCEEEe----cCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHh----CEEEEECCCCCHHHHH
Confidence            765   47877665  554    344578999999999999988743210   1 22233    5777765   899999


Q ss_pred             HHHHHHHccCHHHHHHHHHHHHHHH
Q psy15555        437 QTIKLILHLSQDTKTRISQNAVSSV  461 (488)
Q Consensus       437 ~~i~~ll~~~~~~~~~~~~~a~~~~  461 (488)
                      ++|.+++. |++ .+++.++|++..
T Consensus       431 ~~i~~ll~-~~~-~~~~r~~a~~l~  453 (482)
T 2pq6_A          431 KLINEVIA-GDK-GKKMKQKAMELK  453 (482)
T ss_dssp             HHHHHHHT-SHH-HHHHHHHHHHHH
T ss_pred             HHHHHHHc-CCc-HHHHHHHHHHHH
Confidence            99999998 876 356666666554

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=96.71  E-value=0.0013  Score=57.08  Aligned_cols=75  Identities=11%  Similarity=-0.102  Sum_probs=53.2

Q ss_pred             cEEEecCCChHHHHHHHH-hCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc-------ceeccCCCccccceec
Q psy15555        358 NVEFKVNLPYEDMKKEFS-EGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM-------DIVIEDPETCRNGFLA  429 (488)
Q Consensus       358 ~v~~~g~~~~~el~~~~~-~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~-------eiv~~~~~~~~~g~~~  429 (488)
                      ++...+++  +++..+|+ .||++|.-    ++..++.|++++|+|.|.-+......       +.+.+.    +.++..
T Consensus       115 ~v~v~~f~--~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~----G~~~~~  184 (224)
T 2jzc_A          115 KVIGFDFS--TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL----GYVWSC  184 (224)
T ss_dssp             EEEECCSS--SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH----SCCCEE
T ss_pred             eEEEeecc--chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC----CCEEEc
Confidence            46677887  89999999 99998863    44569999999999999987643211       123222    344444


Q ss_pred             CCHHHHHHHHHHHH
Q psy15555        430 CDEVEYAQTIKLIL  443 (488)
Q Consensus       430 ~~~~~l~~~i~~ll  443 (488)
                       +++++.++|.++.
T Consensus       185 -~~~~L~~~i~~l~  197 (224)
T 2jzc_A          185 -APTETGLIAGLRA  197 (224)
T ss_dssp             -CSCTTTHHHHHHH
T ss_pred             -CHHHHHHHHHHHH
Confidence             6777888887763

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=93.30  E-value=3.1  Score=34.60  Aligned_cols=211  Identities=14%  Similarity=0.083  Sum_probs=120.4

Q ss_pred             HhcccCEEEEcChh---HHHHHHHHhccCC----------ceEEEcCCCCchhhhccC-CCC-CCCCeEEEEeeccCCCC
Q psy15555        238 VGKYSDIIMVNSSW---TEEHVIQLWNCQL----------KTYKLYPPCDTEDLKKIT-HSK-TDGPVKIISVAQFRPEK  302 (488)
Q Consensus       238 ~~~~~d~ii~~s~~---~~~~~~~~~~~~~----------k~~vi~~~~d~~~~~~~~-~~~-~~~~~~i~~~g~~~~~k  302 (488)
                      ..++||.+...|+.   .+-.+.+.++...          .+.-+.+|.|.-...... +.. .-+-.+=-|+||-+.+|
T Consensus       131 tvrradvifshsdngdfnkvlmkewypetvslfddieeaptvynfqppmdivkvrstywkdvseinmninrwigrtttwk  210 (401)
T 1xv5_A          131 TVRRADVIFSHSDNGDFNKVLMKEWYPETVSLFDDIEEAPTVYNFQPPMDIVKVRSTYWKDVSEINMNINRWIGRTTTWK  210 (401)
T ss_dssp             HHHHCSEEEESCTTSHHHHTHHHHHSCSSCCSSSCCCCCCCEEECCCCBCHHHHHHHHCCCGGGCEEEEEEEECCSCGGG
T ss_pred             hhhhhceEEecCCCCcHHHHHHHhhccchhhhhcchhhCCceeccCCCceeeeeehhhhccHHHhhcchhhhhcccchhH
Confidence            45779999998863   2223344333110          222233444443322211 111 01223456899999999


Q ss_pred             ChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCC-----------------CcEEEecCC
Q psy15555        303 DHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-----------------NNVEFKVNL  365 (488)
Q Consensus       303 ~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-----------------~~v~~~g~~  365 (488)
                      |.-.+.+-..++.+-.      .-.-++-|-..       ...+. .+++.|++                 ..-.+++-.
T Consensus       211 gfyqmfdfhekflkpa------gkstvmegler-------spafi-aikekgipyeyygnreidkmnlapnqpaqildcy  276 (401)
T 1xv5_A          211 GFYQMFDFHEKFLKPA------GKSTVMEGLER-------SPAFI-AIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCY  276 (401)
T ss_dssp             CHHHHHHHHHHTTTTT------TCEEEEECCCC-------SHHHH-HHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCC
T ss_pred             hHHHHhhHHHHhcCcc------chhhhhhhhhc-------CCceE-EEcccCCchhhcCcchhhhhcCCCCCcchhhhhe
Confidence            9999999888876532      22334444321       12222 23444443                 113334443


Q ss_pred             ChHHHHHHHHhCcEEEEcCC------CCcCCccHHHHHHcCCcEEEeCCCC-CccceeccCC-Ccccccee-cC--CHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMW------NEHFGIGIVECMAAGLIMIAHKSGG-PKMDIVIEDP-ETCRNGFL-AC--DEVE  434 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~------~e~~g~~~lEa~a~G~PvI~~~~~~-~~~eiv~~~~-~~~~~g~~-~~--~~~~  434 (488)
                      -..|+.+-++.+...-..|.      ....-.+-+|--|||.-.+.....| +..--+.+.+ ..+..|++ ++  |.++
T Consensus       277 insemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmes  356 (401)
T 1xv5_A          277 INSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIWFDENDMES  356 (401)
T ss_dssp             CHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCEEECTTCHHH
T ss_pred             ecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceEEecCCchHH
Confidence            45799999999987776663      2334557799999998777744322 1100011100 01134544 33  8888


Q ss_pred             HHHHHHHHHccCHHHHHHHHHHHHHHH-hh
Q psy15555        435 YAQTIKLILHLSQDTKTRISQNAVSSV-DR  463 (488)
Q Consensus       435 l~~~i~~ll~~~~~~~~~~~~~a~~~~-~~  463 (488)
                      -.+.|.++-. |...+.+-.+.|.+.. ++
T Consensus       357 tferikelss-dralydrerekayeflyqh  385 (401)
T 1xv5_A          357 TFERIKELSS-DRALYDREREKAYEFLYQH  385 (401)
T ss_dssp             HHHHHHHHHT-CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcc-chhhhhHHHHHHHHHHHhc
Confidence            8999999998 9999999999998887 44

>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*

Probab=91.30  E-value=5.8  Score=33.21  Aligned_cols=202  Identities=12%  Similarity=0.147  Sum_probs=121.9

Q ss_pred             HHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccCC---CCCCCCeEEEEeeccCCCCChHHHHHHHH
Q psy15555        236 SHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKITH---SKTDGPVKIISVAQFRPEKDHPLQLRAMY  312 (488)
Q Consensus       236 ~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~~---~~~~~~~~i~~~g~~~~~k~~~~ll~a~~  312 (488)
                      ..+.+.-=.++.+.......-...-.....+...+-+++.-......-   ....+-..++|.|++........+++-+ 
T Consensus       125 ~~~i~spi~visqg~~l~~ak~~h~~vd~~~ef~~f~~~~~k~~~~~f~~~~~~~k~~d~iyggsfrsg~re~kmve~l-  203 (351)
T 1jg7_A          125 ELLIKSPIKVISQGINLDIAKAAHKKVDNVIEFEYFPIEQYKIHMNDFQLSKPTKKTLDVIYGGSFRSGQRESKMVEFL-  203 (351)
T ss_dssp             HHCCCSCEEEEESCSSCHHHHHHTTTCSSEEEEEECCGGGHHHHSTTCCCCCCCCCCEEEEEECCCGGGTTHHHHHHHH-
T ss_pred             hhhhcCchhhhhcccCHHHHHHhhccccceeEEEEechHHhhhhhhheeecCCccceeeeeeccccccCchHHHHHHHH-
Confidence            345555667777776543333322233346677777776554433221   1123446799999988766655555443 


Q ss_pred             HhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcE-EEEcC-CCC-c-
Q psy15555        313 QLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLI-GLHAM-WNE-H-  388 (488)
Q Consensus       313 ~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~-~v~~s-~~e-~-  388 (488)
                        -.       ..+.+-+.|....       ++++.  .+......=+|.|.+|..++.+-=+.|-+ ++.+- .++ . 
T Consensus       204 --fd-------tgl~ieffg~~~~-------~qfkn--p~~pwt~~pvf~gki~~~~~~~~ns~a~a~~i~gdk~y~~n~  265 (351)
T 1jg7_A          204 --FD-------TGLNIEFFGNARE-------KQFKN--PKYPWTKAPVFTGKIPMNMVSEKNSQAIAALIIGDKNYNDNF  265 (351)
T ss_dssp             --SS-------CSSCEEEESSCCG-------GGCCC--TTSCCSSCCEEEECCCGGGHHHHHTTEEEEEECCCGGGTTTC
T ss_pred             --Hh-------cCcceeeecchhH-------HhccC--CCCCCcCCCccCCcCCHHHHhhccccceEEEEeccccccCCe
Confidence              22       2456667786531       11110  12233344679999999999988877773 34433 222 2 


Q ss_pred             CCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecCCHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhh
Q psy15555        389 FGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDR  463 (488)
Q Consensus       389 ~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~  463 (488)
                      --..+.|+||.....+.-..-.+...++++.      -+.++|-++|.+.+.++-+ +...|.++-+--.+.+++
T Consensus       266 it~rvwe~~as~av~~~d~~fd~~~~i~~~a------~fyv~nr~elid~in~~k~-~~~~r~e~l~~qh~il~k  333 (351)
T 1jg7_A          266 ITLRVWETMASDAVMLIDEEFDTKHRIINDA------RFYVNNRAELIDRVNELKH-SDVLRKEMLSIQHDILNK  333 (351)
T ss_dssp             CCHHHHHHHTSSSEEEEEGGGCTTCCSCSCG------GGEECSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred             ecHHHHHHHhhhhHhhhhcccCcccccccCc------eeEecCHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHH
Confidence            2345799999876665543333333556543      4788899999999999999 999999987765555544

>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1

Probab=84.02  E-value=5.1  Score=30.66  Aligned_cols=108  Identities=8%  Similarity=0.032  Sum_probs=66.3

Q ss_pred             eEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHh---------CcEEEEcC-CCCcCCccHHH
Q psy15555        326 LKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSE---------GLIGLHAM-WNEHFGIGIVE  395 (488)
Q Consensus       326 ~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~---------ad~~v~~s-~~e~~g~~~lE  395 (488)
                      .+++++.+.+     ...+.+.+..+..|....+......  ++....+..         .|+++.-. ..+.-|..+++
T Consensus         3 ~~ilivdd~~-----~~~~~l~~~L~~~~~~~~v~~~~~~--~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~   75 (140)
T 1k68_A            3 KKIFLVEDNK-----ADIRLIQEALANSTVPHEVVTVRDG--MEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLA   75 (140)
T ss_dssp             CEEEEECCCH-----HHHHHHHHHHHTCSSCCEEEEECSH--HHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHH
T ss_pred             CeEEEEeCCH-----HHHHHHHHHHHhcCCCceEEEECCH--HHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHH
Confidence            4667777654     5667788888877753345555543  777777764         67666544 33334566666


Q ss_pred             HHH-----cCCcEEEeCCCCCcc---ceeccCCCccccceecC--CHHHHHHHHHHHHc
Q psy15555        396 CMA-----AGLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC--DEVEYAQTIKLILH  444 (488)
Q Consensus       396 a~a-----~G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~  444 (488)
                      .+.     .++|+|........+   +..+.+    ..+++..  +.+++.+++.+++.
T Consensus        76 ~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g----~~~~l~kP~~~~~l~~~i~~~~~  130 (140)
T 1k68_A           76 EIKSDPTLKRIPVVVLSTSINEDDIFHSYDLH----VNCYITKSANLSQLFQIVKGIEE  130 (140)
T ss_dssp             HHHHSTTGGGSCEEEEESCCCHHHHHHHHHTT----CSEEEECCSSHHHHHHHHHHHHH
T ss_pred             HHHcCcccccccEEEEecCCcHHHHHHHHHhc----hhheecCCCCHHHHHHHHHHHHH
Confidence            654     467887743322221   223333    5567765  89999999888775

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=82.05  E-value=38  Score=32.65  Aligned_cols=34  Identities=21%  Similarity=0.137  Sum_probs=27.4

Q ss_pred             cccEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCC
Q psy15555         51 VLKTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGD   94 (488)
Q Consensus        51 ~~~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~   94 (488)
                      +.|||.++        |+.++-..+++.|.+.  +++|++.-.+
T Consensus         2 ~~M~iiI~--------G~G~vG~~la~~L~~~--~~~v~vId~d   35 (461)
T 4g65_A            2 NAMKIIIL--------GAGQVGGTLAENLVGE--NNDITIVDKD   35 (461)
T ss_dssp             CCEEEEEE--------CCSHHHHHHHHHTCST--TEEEEEEESC
T ss_pred             CcCEEEEE--------CCCHHHHHHHHHHHHC--CCCEEEEECC
Confidence            57998886        6678889999999887  7888877665

>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0

Probab=80.45  E-value=7  Score=30.60  Aligned_cols=109  Identities=8%  Similarity=0.075  Sum_probs=67.8

Q ss_pred             ceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH-----------hCcEEEEcC-CCCcCCcc
Q psy15555        325 NLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS-----------EGLIGLHAM-WNEHFGIG  392 (488)
Q Consensus       325 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~-----------~ad~~v~~s-~~e~~g~~  392 (488)
                      ..+++|+.+.+     ...+.+++.+++.|....|......  ++..+.+.           ..|+++.-. ..+.-|..
T Consensus         4 ~~~ILivddd~-----~~~~~l~~~L~~~g~~~~v~~~~~~--~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~   76 (152)
T 3heb_A            4 SVTIVMIEDDL-----GHARLIEKNIRRAGVNNEIIAFTDG--TSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGID   76 (152)
T ss_dssp             -CEEEEECCCH-----HHHHHHHHHHHHTTCCCCEEEESSH--HHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHH
T ss_pred             CceEEEEeCCH-----HHHHHHHHHHHhCCCcceEEEeCCH--HHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHH
Confidence            45777887654     6667888888888764456655544  77777774           356665543 33445667


Q ss_pred             HHHHHHc-----CCcEEEeCCCCCcc---ceeccCCCccccceecC--CHHHHHHHHHHHHc
Q psy15555        393 IVECMAA-----GLIMIAHKSGGPKM---DIVIEDPETCRNGFLAC--DEVEYAQTIKLILH  444 (488)
Q Consensus       393 ~lEa~a~-----G~PvI~~~~~~~~~---eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~  444 (488)
                      +++.+..     ++|||........+   +..+.+    ..+++.+  +.+++.++|.++..
T Consensus        77 ~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g----~~~~l~KP~~~~~l~~~i~~~~~  134 (152)
T 3heb_A           77 ILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLG----ANVYITKPVNYENFANAIRQLGL  134 (152)
T ss_dssp             HHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTT----CSEEEECCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCC----CcEEEeCCCCHHHHHHHHHHHHH
Confidence            7776654     67887744332221   233333    5567765  88999888887743

>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}

Probab=80.30  E-value=9.9  Score=29.27  Aligned_cols=113  Identities=7%  Similarity=-0.006  Sum_probs=66.8

Q ss_pred             CceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHh-------CcEEEEcC-CCCcCCccHHH
Q psy15555        324 DNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSE-------GLIGLHAM-WNEHFGIGIVE  395 (488)
Q Consensus       324 ~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~-------ad~~v~~s-~~e~~g~~~lE  395 (488)
                      ...+++|+.+.+     ...+.+....+..+....+.....  .++..+.+..       .|+++.-. ..+.-|..+++
T Consensus         8 ~~~~iLivdd~~-----~~~~~l~~~l~~~~~~~~v~~~~~--~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~   80 (146)
T 3ilh_A            8 KIDSVLLIDDDD-----IVNFLNTTIIRMTHRVEEIQSVTS--GNAAINKLNELYAAGRWPSIICIDINMPGINGWELID   80 (146)
T ss_dssp             CEEEEEEECSCH-----HHHHHHHHHHHTTCCEEEEEEESS--HHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHH
T ss_pred             ccceEEEEeCCH-----HHHHHHHHHHHhcCCCeeeeecCC--HHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHH
Confidence            356778887654     555677777777664223444443  3777777765       67665543 34445666666


Q ss_pred             HHHc-------CCcEEEeCCCCCccceeccCCCcc-ccceecC--CHHHHHHHHHHHHc
Q psy15555        396 CMAA-------GLIMIAHKSGGPKMDIVIEDPETC-RNGFLAC--DEVEYAQTIKLILH  444 (488)
Q Consensus       396 a~a~-------G~PvI~~~~~~~~~eiv~~~~~~~-~~g~~~~--~~~~l~~~i~~ll~  444 (488)
                      .+..       ..|+|........+...... ..+ ..+++..  +.++|.++|.+...
T Consensus        81 ~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~-~~g~~~~~l~KP~~~~~L~~~i~~~~~  138 (146)
T 3ilh_A           81 LFKQHFQPMKNKSIVCLLSSSLDPRDQAKAE-ASDWVDYYVSKPLTANALNNLYNKVLN  138 (146)
T ss_dssp             HHHHHCGGGTTTCEEEEECSSCCHHHHHHHH-HCSSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred             HHHHhhhhccCCCeEEEEeCCCChHHHHHHH-hcCCcceeeeCCCCHHHHHHHHHHHHH
Confidence            5543       67777754433321222221 111 2346665  99999999999887

>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}

Probab=80.26  E-value=7.8  Score=29.86  Aligned_cols=107  Identities=12%  Similarity=0.102  Sum_probs=65.2

Q ss_pred             ceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHH----hCcEEEEcC-CCCcCCccHHHHHH-
Q psy15555        325 NLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFS----EGLIGLHAM-WNEHFGIGIVECMA-  398 (488)
Q Consensus       325 ~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~----~ad~~v~~s-~~e~~g~~~lEa~a-  398 (488)
                      ..+++|+.+.+     ...+.+++..+..|.  .+.....  .++....+.    ..|+++.-. ..+.-|..+++.+. 
T Consensus         3 ~~~ilivdd~~-----~~~~~l~~~l~~~g~--~v~~~~~--~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~   73 (143)
T 3jte_A            3 LAKILVIDDES-----TILQNIKFLLEIDGN--EVLTASS--STEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKK   73 (143)
T ss_dssp             CCEEEEECSCH-----HHHHHHHHHHHHTTC--EEEEESS--HHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHH
T ss_pred             CCEEEEEcCCH-----HHHHHHHHHHHhCCc--eEEEeCC--HHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHH
Confidence            34677777654     556778888877763  3444333  366666665    467555543 34444556665544 


Q ss_pred             --cCCcEEEeCCCCCc---cceeccCCCccccceecC--CHHHHHHHHHHHHc
Q psy15555        399 --AGLIMIAHKSGGPK---MDIVIEDPETCRNGFLAC--DEVEYAQTIKLILH  444 (488)
Q Consensus       399 --~G~PvI~~~~~~~~---~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll~  444 (488)
                        ..+|||........   .+.++.+    ..+++..  +.+++.+++..++.
T Consensus        74 ~~~~~~ii~ls~~~~~~~~~~~~~~g----~~~~l~kp~~~~~l~~~l~~~~~  122 (143)
T 3jte_A           74 ITPHMAVIILTGHGDLDNAILAMKEG----AFEYLRKPVTAQDLSIAINNAIN  122 (143)
T ss_dssp             HCTTCEEEEEECTTCHHHHHHHHHTT----CSEEEESSCCHHHHHHHHHHHHH
T ss_pred             hCCCCeEEEEECCCCHHHHHHHHHhC----cceeEeCCCCHHHHHHHHHHHHH
Confidence              36788774332222   1233444    5667765  89999999999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	488
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	7e-12
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	3e-09
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	1e-08

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 64.9 bits (157), Expect = 7e-12
 Identities = 24/218 (11%), Positives = 59/218 (27%), Gaps = 25/218 (11%)

Query: 274 DTEDLKKITHSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGS 333
               L ++     +    I SV +    K  P +  A   L +   +            +
Sbjct: 240 LPPKLAQLKAELKNVQN-IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298

Query: 334 TRNEEDEV---------CVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAM 384
           +R +                 +      L          +   + + K F    +GL   
Sbjct: 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTP 358

Query: 385 WNEHFGIGIVECMAAGL-----IMIAHKSGGPKMDIVIEDPETCRNGFLA--CDEVEYAQ 437
             +   +   E +AA       +++  +  G              +  +    D  E A 
Sbjct: 359 LRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--------ANELTSALIVNPYDRDEVAA 410

Query: 438 TIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLT 475
            +   L +S   +       +  + +  +  ++  F++
Sbjct: 411 ALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFIS 448

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 56.4 bits (134), Expect = 3e-09
 Identities = 65/417 (15%), Positives = 122/417 (29%), Gaps = 32/417 (7%)

Query: 66  GGGERVLWTAVLALHQKYPDYKIYI-YTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYL 124
           GG    L     AL     +  ++    G         I+   +   + +  +    + +
Sbjct: 16  GGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRI 75

Query: 125 YR----RKFVEASLYPYFTLLGQSIGSMILGVEALLS------FQPDI-YIDTMGYAFTY 173
           YR        E    P +  L +   +       LL+        PD+ +       F  
Sbjct: 76  YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAG 135

Query: 174 PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFAL 233
            L            IH         +++            +A  P +       Y    +
Sbjct: 136 ALIKKYFKIPAVFTIHRL-----NKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIV 190

Query: 234 LYSHVGKYSDIIMVNSSWTEE-HVIQLWNCQLKTYKLYPPCDTEDLKKITHSKTDGPVKI 292
                G   D      ++  +   +          + Y     ++ KK   SK      +
Sbjct: 191 TTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV 250

Query: 293 ISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKH 352
             +   R ++        +  +  + S++ +  ++ I IG            +       
Sbjct: 251 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD------PELEGWARSLE 304

Query: 353 LSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK 412
               N       L  E +++ +      +   + E FG+  +E M  G I IA   GG +
Sbjct: 305 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR 364

Query: 413 MDIVIEDPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSME 467
            DI+  +      G L  A D  E A  I   L LS+   ++  +N       FS E
Sbjct: 365 -DIITNE-----TGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWE 415

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 54.7 bits (130), Expect = 1e-08
 Identities = 30/254 (11%), Positives = 65/254 (25%), Gaps = 29/254 (11%)

Query: 226 FYYKVFALLYSHVGKYSDI---IMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT 282
           F   +  ++ S       I   I  +        +   N      K          +   
Sbjct: 226 FGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285

Query: 283 HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVC 342
                 P+    +++   +K   L   A+ ++            +L+ +G+     +   
Sbjct: 286 IDDDGSPL-FCVISRLTWQKGIDLMAEAVDEIVS-------LGGRLVVLGAGDVALEGAL 337

Query: 343 VKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI 402
           +               V   +           +     +     E  G+  +  +  G I
Sbjct: 338 LAAASRH------HGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCI 391

Query: 403 MIAHKSGGPKMDIVIE-----DPETCRNGFL--ACDEVEYAQTIKLILHLSQDTKTR--I 453
            +  ++GG   D VI+            G            Q I+  +    D K    +
Sbjct: 392 PVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQM 450

Query: 454 SQNAVSSVDRFSME 467
            +  + S    S E
Sbjct: 451 QKLGMKS--DVSWE 462

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	488
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.93
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.92
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.9
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.37
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.33
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.27
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	99.13
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.02
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	98.91
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.74
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	98.71
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.34
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	98.24
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	98.03
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	97.85
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	97.67
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	97.61
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.55
d1b74a1	105	Glutamate racemase {Aquifex pyrophilus [TaxId: 271	91.66
d1rcua_	170	Hypothetical protein TM1055 {Thermotoga maritima [	91.34
d1ybha1	179	Acetohydroxyacid synthase catalytic subunit {Thale	85.33
d1t9ba1	171	Acetohydroxyacid synthase catalytic subunit {Baker	84.45
d1pvda1	179	Pyruvate decarboxylase {Baker's yeast (Saccharomyc	84.3
d2ez9a1	183	Pyruvate oxidase {Lactobacillus plantarum [TaxId:	80.57

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-34  Score=277.76  Aligned_cols=350  Identities=14%  Similarity=0.151  Sum_probs=246.4

Q ss_pred             EEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeeccC
Q psy15555         55 VAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEASL  134 (488)
Q Consensus        55 I~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~  134 (488)
                      |+|+...+.+.||+|+.+..++++|.++||+++|+  |......               .+.. +.+..++...+..   
T Consensus         2 i~f~~~~y~p~GG~e~~~~~la~~L~~~G~~V~v~--~~~~~~~---------------~~~~-~~~~~~~~~~~~~---   60 (370)
T d2iw1a1           2 VAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVY--TQSWEGD---------------CPKA-FELIQVPVKSHTN---   60 (370)
T ss_dssp             EEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEE--ESEECSC---------------CCTT-CEEEECCCCCSSH---
T ss_pred             EEEEecCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ecCCCCC---------------CCCc-eEEEEcCcccccc---
Confidence            78888766668999999999999999996665554  4321111               1122 4455444333211   


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhhhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCcccc
Q psy15555        135 YPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYPLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRV  214 (488)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~  214 (488)
                         .   ...........+.++..++|+++....++...           +.+.+...    ........          
T Consensus        61 ---~---~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~-----------~~~~~~~~----~~~~~~~~----------  109 (370)
T d2iw1a1          61 ---H---GRNAEYYAWVQNHLKEHPADRVVGFNKMPGLD-----------VYFAADVC----YAEKVAQE----------  109 (370)
T ss_dssp             ---H---HHHHHHHHHHHHHHHHSCCSEEEESSCCTTCS-----------EEECCSCC----HHHHHHHH----------
T ss_pred             ---c---hhhHHHHHHHHHHHHhcccceeeecccCchHH-----------HHHHhhcc----cceeeeee----------
Confidence               0   01111123345567788999988665443221           11111100    00000000          


Q ss_pred             ccCccchhhhHHHHHHHHHHHH--HHhcccCEEEEcChhHHHHHHHHhccC-CceEEEcCCCCchhhhccCC--------
Q psy15555        215 ANNPILTSFKLFYYKVFALLYS--HVGKYSDIIMVNSSWTEEHVIQLWNCQ-LKTYKLYPPCDTEDLKKITH--------  283 (488)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~~~-~k~~vi~~~~d~~~~~~~~~--------  283 (488)
                       .+ ....... .+..+....+  .....++.+++.++...+.+.+..+.+ .++.+++|++|.+.+.+...        
T Consensus       110 -~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r  186 (370)
T d2iw1a1         110 -KG-FLYRLTS-RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYR  186 (370)
T ss_dssp             -CC-HHHHTSH-HHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHH
T ss_pred             -cC-ccccccc-hhchhHHHHHHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhh
Confidence             00 0000000 1111111222  223467899999999988888776644 47899999999776543321        


Q ss_pred             ---CCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        284 ---SKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       284 ---~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                         ....++++++++|++.++||++.+++|++++.++.     ++..+.++|+++..      +++++++++++..++++
T Consensus       187 ~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~-----~~~~~~ii~g~~~~------~~~~~~~~~~~~~~~v~  255 (370)
T d2iw1a1         187 QKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESL-----RHNTLLFVVGQDKP------RKFEALAEKLGVRSNVH  255 (370)
T ss_dssp             HHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHH-----HHTEEEEEESSSCC------HHHHHHHHHHTCGGGEE
T ss_pred             hccCCCccceEEEEEeccccccchhhhccccccccccc-----ccceeeeccccccc------ccccccccccccccccc
Confidence               12457889999999999999999999999998887     67778777776544      66788889999899999


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceec-C--CHHHHHH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLA-C--DEVEYAQ  437 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~-~--~~~~l~~  437 (488)
                      +.|..  +|+.++|+.||+++.||..|++|++++|||++|+|||+++.+|.. |++.++    .+|+++ +  |++++++
T Consensus       256 ~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~-e~i~~~----~~G~l~~~~~d~~~la~  328 (370)
T d2iw1a1         256 FFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADA----NCGTVIAEPFSQEQLNE  328 (370)
T ss_dssp             EESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTT-HHHHHH----TCEEEECSSCCHHHHHH
T ss_pred             ccccc--cccccccccccccccccccccccceeeecccCCeeEEEeCCCChH-HHhcCC----CceEEEcCCCCHHHHHH
Confidence            99987  789999999999999999999999999999999999999999997 999887    888654 3  8999999


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQ  478 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~  478 (488)
                      +|.++++ |++.+++|+++|++.++.|++..+.+++.++++
T Consensus       329 ~i~~ll~-d~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~  368 (370)
T d2iw1a1         329 VLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIIT  368 (370)
T ss_dssp             HHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred             HHHHHHc-CHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHh
Confidence            9999999 999999999999999988888888888877765

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.5e-35  Score=292.98  Aligned_cols=229  Identities=12%  Similarity=0.078  Sum_probs=182.4

Q ss_pred             HhcccCEEEEcChhHHHHHHHHh----------ccCCceEEEcCCCCchhhhccCCC-----------------------
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLW----------NCQLKTYKLYPPCDTEDLKKITHS-----------------------  284 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~----------~~~~k~~vi~~~~d~~~~~~~~~~-----------------------  284 (488)
                      ....+|.++++|...++......          ....++.+++|++|.+.+.+....                       
T Consensus       203 ~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~  282 (477)
T d1rzua_         203 GLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE  282 (477)
T ss_dssp             HHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH
T ss_pred             HHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHH
Confidence            44568999999998777653211          122378999999998776543211                       


Q ss_pred             ----CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEE
Q psy15555        285 ----KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVE  360 (488)
Q Consensus       285 ----~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~  360 (488)
                          ..++.++++++||+.++||++.+++|+.++.+.       +.+++++|.|+.    ....++++.....  .+++.
T Consensus       283 ~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~-------~~~l~~~G~G~~----~~~~~~~~~~~~~--~~~v~  349 (477)
T d1rzua_         283 HFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL-------GGRLVVLGAGDV----ALEGALLAAASRH--HGRVG  349 (477)
T ss_dssp             HHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT-------TCEEEEEECBCH----HHHHHHHHHHHHT--TTTEE
T ss_pred             hcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh-------CCeEEEEecCCc----hHHHHHHHHHhhc--CCeEE
Confidence                124567999999999999999999999998763       678999998862    2223444444443  57899


Q ss_pred             EecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCC-----CccccceecC--CHH
Q psy15555        361 FKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDP-----ETCRNGFLAC--DEV  433 (488)
Q Consensus       361 ~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~-----~~~~~g~~~~--~~~  433 (488)
                      +.+..+.+++..+|+.||++|+||..|+||++++|||++|+|||+++.||.. |++.++.     ....+|++++  |++
T Consensus       350 ~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~-E~v~d~~~~~~~~~~~~G~l~~~~d~~  428 (477)
T d1rzua_         350 VAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLD  428 (477)
T ss_dssp             EEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHH
T ss_pred             EEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCc-ceeecCCccccccCCCceEEeCCCCHH
Confidence            9999999999999999999999999999999999999999999999999997 8887761     0124899877  999


Q ss_pred             HHHHHHHHHHc--cCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        434 EYAQTIKLILH--LSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       434 ~l~~~i~~ll~--~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      +|+++|.++++  .|++.+++|+++|.+  ++|||++++++++++|+++++
T Consensus       429 ~la~ai~~~l~~~~~~~~~~~~~~~a~~--~~fsw~~~a~~~~~lY~~ll~  477 (477)
T d1rzua_         429 GLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhhhCCHHHHHHHHHHHHH--hhCCHHHHHHHHHHHHHHHhC
Confidence            99999987663  288999999888742  789999999999999999873

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=8.4e-34  Score=279.00  Aligned_cols=395  Identities=17%  Similarity=0.116  Sum_probs=254.3

Q ss_pred             cEEEEeccCCCC--CCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhccccc--------CCCeeEEE
Q psy15555         53 KTVAFFHPYCNA--GGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVL--------PDQVINFV  122 (488)
Q Consensus        53 ~rI~~~~~~~~~--~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~  122 (488)
                      |||++++..+.+  .||.++++..|+++|+++||  +|.+++...+....+..... ..+....        ..+ +...
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh--~V~Vvtp~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~   76 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGH--EVLVFTPSHGRFQGEEIGKI-RVFGEEVQVKVSYEERGN-LRIY   76 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTC--EEEEEEECTTSSCCEEEEEE-ECSSSEEEEEEEEEEETT-EEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCC--EEEEEecCCCccchhhccce-eecccccceeeeeeccCC-eEEE
Confidence            899999876554  48899999999999999955  55555433221110000000 0000000        011 2222


Q ss_pred             EeeccceeeccC-chhH-HHHHHH----HHHHHHHHHHhh-hcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccc
Q psy15555        123 YLYRRKFVEASL-YPYF-TLLGQS----IGSMILGVEALL-SFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTIT  194 (488)
Q Consensus       123 ~~~~~~~~~~~~-~~~~-~~~~~~----~~~~~~~~~~l~-~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~  194 (488)
                      ............ .... ......    .........+++ ...|||||.+........ .++...++|+++++|.....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~  156 (437)
T d2bisa1          77 RIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS  156 (437)
T ss_dssp             EEESSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCCEEEEESSCCCC
T ss_pred             ecCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCceeEEEeecccc
Confidence            221111100111 1111 111111    111122333333 346899997754333322 33446689999999975431


Q ss_pred             h-HHHHHHHhhhhcccCccccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-cCCceEEEcCC
Q psy15555        195 K-EMLTRVARRVITHNNSQRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-CQLKTYKLYPP  272 (488)
Q Consensus       195 ~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~k~~vi~~~  272 (488)
                      . ..........   .      ........         ..++.....+|.+++.+..........+. .+.++.+++|+
T Consensus       157 ~~~~~~~~~~~~---~------~~~~~~~~---------~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g  218 (437)
T d2bisa1         157 KLPAFYFHEAGL---S------ELAPYPDI---------DPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG  218 (437)
T ss_dssp             CEEHHHHHHTTC---G------GGCCSSEE---------CHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCC
T ss_pred             ccchhhhhhccc---h------hhhhHHHH---------HHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecc
Confidence            1 0000000000   0      00000000         01223445689999999988776555443 34589999999


Q ss_pred             CCchhhhccCCC--------------CCCCCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCC
Q psy15555        273 CDTEDLKKITHS--------------KTDGPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNE  337 (488)
Q Consensus       273 ~d~~~~~~~~~~--------------~~~~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~  337 (488)
                      +|.+.+.+....              ...++++++++|++. +.||++.+++|+..+..+..   .++++|+++|.++. 
T Consensus       219 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~---~~~~~lvi~G~~~~-  294 (437)
T d2bisa1         219 IDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE---FQEMRFIIIGKGDP-  294 (437)
T ss_dssp             CCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGG---GGGEEEEEECCBCH-
T ss_pred             cccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccccchhHHHHHhhhcccccccc---cccceeeeeccccc-
Confidence            998877553211              124568999999986 57999999999998854321   16899999999862 


Q ss_pred             CcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceec
Q psy15555        338 EDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVI  417 (488)
Q Consensus       338 ~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~  417 (488)
                         +....++.+.+.  ..+.+.+.+.++.+++..+|+.||+++.||..|++|++++|||++|+|||+++.++.. |+++
T Consensus       295 ---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~-e~i~  368 (437)
T d2bisa1         295 ---ELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR-DIIT  368 (437)
T ss_dssp             ---HHHHHHHHHHHT--CTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHH-HHCC
T ss_pred             ---ccccchhhhccc--cccceeccccCcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCcH-HhEE
Confidence               222233333333  3567788899999999999999999999999999999999999999999999999886 8876


Q ss_pred             cCCCccccceecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhh
Q psy15555        418 EDPETCRNGFLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFKVM  484 (488)
Q Consensus       418 ~~~~~~~~g~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~~~  484 (488)
                      +     ++|++++  |+++++++|.++++++++.+++|++++++.+++|||++++++++++|++++.+.
T Consensus       369 ~-----~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~  432 (437)
T d2bisa1         369 N-----ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDRA  432 (437)
T ss_dssp             T-----TTCEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred             C-----CcEEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhH
Confidence            5     4798876  999999999999875788999999999998888999999999999999988653

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=6.3e-24  Score=206.69  Aligned_cols=292  Identities=13%  Similarity=0.135  Sum_probs=215.5

Q ss_pred             HHhhhcCCc-EEEecCCccchhhhh-h-hhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHHHHH
Q psy15555        153 EALLSFQPD-IYIDTMGYAFTYPLF-S-YIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLFYYK  229 (488)
Q Consensus       153 ~~l~~~~pD-iii~~~~~~~~~~~~-~-~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (488)
                      ++....++| +|+.+..+...+|.. + ...+.++.+++|.|+...+....                   ....    ..
T Consensus       115 ~l~~~~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~-------------------lp~~----~~  171 (456)
T d1uqta_         115 KLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNA-------------------LPTY----DT  171 (456)
T ss_dssp             HHGGGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTT-------------------STTH----HH
T ss_pred             HHHHhccCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhcc-------------------Ccch----HH
Confidence            444555664 666555555555522 2 24567889999999864433210                   0000    01


Q ss_pred             HHHHHHHHHhcccCEEEEcChhHHHHHHHHhc-----------------cCCceEEEcCCCCchhhhccCCC--------
Q psy15555        230 VFALLYSHVGKYSDIIMVNSSWTEEHVIQLWN-----------------CQLKTYKLYPPCDTEDLKKITHS--------  284 (488)
Q Consensus       230 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~-----------------~~~k~~vi~~~~d~~~~~~~~~~--------  284 (488)
                          +. ..+-.+|.|..++...++.+.+...                 ...++.++|+++|++.+......        
T Consensus       172 ----il-~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~  246 (456)
T d1uqta_         172 ----LL-EQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQ  246 (456)
T ss_dssp             ----HH-HHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHH
T ss_pred             ----HH-HHhhccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHH
Confidence                11 2334679999999998888865321                 12267789999999887543211        


Q ss_pred             ---CCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHH---HHHHHHHHh------
Q psy15555        285 ---KTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCV---KDMQDLCKH------  352 (488)
Q Consensus       285 ---~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~---~~l~~~~~~------  352 (488)
                         ...++++++++||+++.||++.+++|+.++.+++++. ..++.++.+|.++..+..++.   .++.+++.+      
T Consensus       247 l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~-~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~  325 (456)
T d1uqta_         247 LKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH-HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG  325 (456)
T ss_dssp             HHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG-TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccc-cccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhc
Confidence               1247889999999999999999999999999887311 114677778776655443332   333333332      


Q ss_pred             -cCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCc-----EEEeCCCCCccceeccCCCccccc
Q psy15555        353 -LSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLI-----MIAHKSGGPKMDIVIEDPETCRNG  426 (488)
Q Consensus       353 -~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~P-----vI~~~~~~~~~eiv~~~~~~~~~g  426 (488)
                       .+..+.+.+.+.++.+++..+|+.||+++.||..|+||++++|||+||+|     +|+|+.+|.. +.+.       .|
T Consensus       326 ~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~-~~l~-------~g  397 (456)
T d1uqta_         326 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT-------SA  397 (456)
T ss_dssp             BTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTCT-------TS
T ss_pred             cCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH-HHhC-------Ce
Confidence             35567788999999999999999999999999999999999999999999     9999999987 6663       36


Q ss_pred             eecC--CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        427 FLAC--DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       427 ~~~~--~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                      ++++  |+++++++|.+++++++++++++.+++++.+.+|+.+..++.+++.++++.
T Consensus       398 ~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~  454 (456)
T d1uqta_         398 LIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV  454 (456)
T ss_dssp             EEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred             EEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhhc
Confidence            7776  999999999999987889999999999999988999999999999888753

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.92  E-value=5e-24  Score=184.30  Aligned_cols=164  Identities=24%  Similarity=0.292  Sum_probs=136.6

Q ss_pred             CCCeEEEEeeccC-CCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        287 DGPVKIISVAQFR-PEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       287 ~~~~~i~~~g~~~-~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      +++++++|+||+. ++||++.+++|++.+.++..   .++++++++|.++.    ++...++.+.+..  .+.+.+.|.+
T Consensus        30 ~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~---~~~~~l~i~G~g~~----~~~~~~~~~~~~~--~~~~~~~~~~  100 (196)
T d2bfwa1          30 DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKE---FQEMRFIIIGKGDP----ELEGWARSLEEKH--GNVKVITEML  100 (196)
T ss_dssp             CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGG---GGGEEEEEECCBCH----HHHHHHHHHHHHC--TTEEEECSCC
T ss_pred             CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccC---CCCeEEEEEeeccc----chhhhhhhhhhcc--ceeEEeeecc
Confidence            4678899999996 68999999999999864321   16899999998751    2223333443433  4567788999


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC--CHHHHHHHHHHHH
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC--DEVEYAQTIKLIL  443 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~--~~~~l~~~i~~ll  443 (488)
                      +.+++..+|+.||++|.||..|++|.+++|||+||+|||+++.++.. |++.+     .+|++++  |+++++++|.+++
T Consensus       101 ~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~-e~i~~-----~~g~~~~~~~~~~l~~~i~~~l  174 (196)
T d2bfwa1         101 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR-DIITN-----ETGILVKAGDPGELANAILKAL  174 (196)
T ss_dssp             CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHH-HHCCT-----TTCEEECTTCHHHHHHHHHHHH
T ss_pred             ccccchhccccccccccccccccccccchhhhhcCceeeecCCCccc-eeecC-----CceeeECCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998886 88754     4788876  8999999999988


Q ss_pred             ccCHHHHHHHHHHHHHHHhhcC
Q psy15555        444 HLSQDTKTRISQNAVSSVDRFS  465 (488)
Q Consensus       444 ~~~~~~~~~~~~~a~~~~~~~s  465 (488)
                      ..+++.+.+++++|++.+.+||
T Consensus       175 ~~~~~~~~~~~~~a~~~a~~fs  196 (196)
T d2bfwa1         175 ELSRSDLSKFRENCKKRAMSFS  196 (196)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHTC
T ss_pred             hCCHHHHHHHHHHHHHHHHhCC
Confidence            7689999999999999987786

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.90  E-value=8.6e-24  Score=177.46  Aligned_cols=149  Identities=27%  Similarity=0.346  Sum_probs=125.6

Q ss_pred             eEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHH
Q psy15555        290 VKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYED  369 (488)
Q Consensus       290 ~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~e  369 (488)
                      ..++|+||+.++||++.+++|++++         ++.+++++|.++..+   ..+.+.+.+.+.. .++|+++|+++.++
T Consensus        13 ~~~l~iGrl~~~K~~~~~i~a~~~l---------~~~~l~ivg~~~~~~---~~~~~~~~~~~~~-~~~v~~~g~~~~~~   79 (166)
T d2f9fa1          13 DFWLSVNRIYPEKRIELQLEVFKKL---------QDEKLYIVGWFSKGD---HAERYARKIMKIA-PDNVKFLGSVSEEE   79 (166)
T ss_dssp             SCEEEECCSSGGGTHHHHHHHHHHC---------TTSCEEEEBCCCTTS---THHHHHHHHHHHS-CTTEEEEESCCHHH
T ss_pred             CEEEEEecCccccCHHHHHHHHHHh---------cCCeEEEEEeccccc---chhhhhhhhcccc-cCcEEEeecccccc
Confidence            4578999999999999999999877         577899999887542   2344555555443 46899999999999


Q ss_pred             HHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHH
Q psy15555        370 MKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       370 l~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~  448 (488)
                      +.++|+.||++++||..|++|.+++|||++|+|||+++.++.. |++.++    .+|++++ |+++++++|.++++ +++
T Consensus        80 ~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~-e~i~~~----~~g~~~~~d~~~~~~~i~~l~~-~~~  153 (166)
T d2f9fa1          80 LIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINE----KTGYLVNADVNEIIDAMKKVSK-NPD  153 (166)
T ss_dssp             HHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBT----TTEEEECSCHHHHHHHHHHHHH-CTT
T ss_pred             cccccccccccccccccccccccccccccccccceeecCCcce-eeecCC----cccccCCCCHHHHHHHHHHHHh-CHH
Confidence            9999999999999999999999999999999999999999886 889888    8899886 99999999999999 754


Q ss_pred             -HHHHHHHHH
Q psy15555        449 -TKTRISQNA  457 (488)
Q Consensus       449 -~~~~~~~~a  457 (488)
                       .++.+.++|
T Consensus       154 ~~~~~~~~~a  163 (166)
T d2f9fa1         154 KFKKDCFRRA  163 (166)
T ss_dssp             TTHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence             344444444

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=1.9e-10  Score=107.28  Aligned_cols=333  Identities=12%  Similarity=0.069  Sum_probs=170.7

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCCCCCChhHHHHHhhhhcccccCCCeeEEEEeeccceeec
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGDVDASPSEIIKRAHQRFNIVLPDQVINFVYLYRRKFVEA  132 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  132 (488)
                      +||++.+.  + .||-...+..++++|.++  |++|.+++... .......+.          .. ..+..++.......
T Consensus         1 kkili~~~--G-tGGHv~~a~al~~~L~~~--G~eV~~i~~~~-~~~~~~~~~----------~~-~~~~~~~~~~~~~~   63 (351)
T d1f0ka_           1 KRLMVMAG--G-TGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD-RMEADLVPK----------HG-IEIDFIRISGLRGK   63 (351)
T ss_dssp             CEEEEECC--S-SHHHHHHHHHHHHHHHTT--TCEEEEEECTT-STHHHHGGG----------GT-CEEEECCCCCCTTC
T ss_pred             CEEEEEcC--C-cHHHHHHHHHHHHHHHhC--CCEEEEEEeCC-cchhhcccc----------cC-CcEEEEECCCcCCC
Confidence            47888642  1 234446678899999998  55665555442 222222211          11 33433333322212


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHhhhcCCcEEEecCCccchhh-hhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCc
Q psy15555        133 SLYPYFTLLGQSIGSMILGVEALLSFQPDIYIDTMGYAFTYP-LFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNS  211 (488)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~pDiii~~~~~~~~~~-~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~  211 (488)
                      .....+...............+++..+||+++.+........ ......++|++.+.+...                   
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~-------------------  124 (351)
T d1f0ka_          64 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI-------------------  124 (351)
T ss_dssp             CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-------------------
T ss_pred             CHHHHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccceeecccccc-------------------
Confidence            222222222223334455667788999999887754443322 223356888877554221                   


Q ss_pred             cccccCccchhhhHHHHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCCCCchhhhccC----CCCCC
Q psy15555        212 QRVANNPILTSFKLFYYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPPCDTEDLKKIT----HSKTD  287 (488)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~~d~~~~~~~~----~~~~~  287 (488)
                              ...           ..+.....++.+......          .......+.++..........    .....
T Consensus       125 --------~~~-----------~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (351)
T d1f0ka_         125 --------AGL-----------TNKWLAKIATKVMQAFPG----------AFPNAEVVGNPVRTDVLALPLPQQRLAGRE  175 (351)
T ss_dssp             --------CCH-----------HHHHHTTTCSEEEESSTT----------SSSSCEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred             --------cch-----------hHHHhhhhcceeeccccc----------cccceeEEcCCcccccccchhHHhhhhccc
Confidence                    110           011223445555443211          112344555554433322211    11223


Q ss_pred             CCeEEEEeeccCCCCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCCh
Q psy15555        288 GPVKIISVAQFRPEKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPY  367 (488)
Q Consensus       288 ~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~  367 (488)
                      ++..++.+|......   .+.+.+.......+    .....++++....     ..+........  ...++...++.  
T Consensus       176 ~~~~i~~~~gs~g~~---~~~~~~~~~~~~l~----~~~~~i~~~~~~~-----~~~~~~~~~~~--~~~~~~v~~f~--  239 (351)
T d1f0ka_         176 GPVRVLVVGGSQGAR---ILNQTMPQVAAKLG----DSVTIWHQSGKGS-----QQSVEQAYAEA--GQPQHKVTEFI--  239 (351)
T ss_dssp             SSEEEEEECTTTCCH---HHHHHHHHHHHHHG----GGEEEEEECCTTC-----HHHHHHHHHHT--TCTTSEEESCC--
T ss_pred             CCcccccccccchhh---hhHHHHHHhhhhhc----ccceeeeeccccc-----hhhhhhhhccc--ccccceeeeeh--
Confidence            455555555433222   22233333222221    2233444444321     11222222222  24578888988  


Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC-Ccc-----ceeccCCCccccceecC----CHHHHHH
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG-PKM-----DIVIEDPETCRNGFLAC----DEVEYAQ  437 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~-~~~-----eiv~~~~~~~~~g~~~~----~~~~l~~  437 (488)
                      +++.++|+.||++|..    +++.++.|++++|+|+|+.+... ..+     +.+++.    +.|+..+    +.+.+.+
T Consensus       240 ~~~~~lm~~adl~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~----G~~~~~~~~~~~~e~l~~  311 (351)
T d1f0ka_         240 DDMAAAYAWADVVVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA----GAAKIIEQPQLSVDAVAN  311 (351)
T ss_dssp             SCHHHHHHHCSEEEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT----TSEEECCGGGCCHHHHHH
T ss_pred             hhHHHHHHhCchhhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHC----CCEEEechhhCCHHHHHH
Confidence            7899999999998863    34578899999999999976431 111     234443    5777765    5667777


Q ss_pred             HHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Q psy15555        438 TIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFT  477 (488)
Q Consensus       438 ~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~  477 (488)
                      +|..+   +++.+.+|++++++....-..+.+++.++++.
T Consensus       312 ~l~~l---~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~  348 (351)
T d1f0ka_         312 TLAGW---SRETLLTMAERARAASIPDATERVANEVSRVA  348 (351)
T ss_dssp             HHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred             HHHhh---CHHHHHHHHHHHHccCCccHHHHHHHHHHHHH
Confidence            76653   67788899999876544334455555544443

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.33  E-value=5.2e-10  Score=104.66  Aligned_cols=218  Identities=11%  Similarity=0.037  Sum_probs=151.0

Q ss_pred             cccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhcc----CCCCCCCCeEEEEeeccCCCCChHHHHHHHHHh
Q psy15555        240 KYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKI----THSKTDGPVKIISVAQFRPEKDHPLQLRAMYQL  314 (488)
Q Consensus       240 ~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~----~~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l  314 (488)
                      +.++..++.++..++++.+.+-.+.++.+++++ +|.-.....    ......+++.++...+.+..+....+.+++..+
T Consensus       142 kls~~hf~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~  221 (373)
T d1v4va_         142 VLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRV  221 (373)
T ss_dssp             HHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHH
T ss_pred             cccceeeecchhhhhhhhhhcccccceeecccchhhHHHhhhhhcccccccccccceeEEeccccccchHHHHHHHHHHH
Confidence            458999999999999999987767789999987 442211110    112334566777777766666777788888888


Q ss_pred             HHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHH
Q psy15555        315 RQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIV  394 (488)
Q Consensus       315 ~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~l  394 (488)
                      .+..     .++.+++ +.++..   .......+..   ....++.++..+++.++..+++.|+++++-|     |-.+.
T Consensus       222 ~~~~-----~~~~~i~-p~~~~~---~~~~~~~~~~---~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~  284 (373)
T d1v4va_         222 AEAF-----PHLTFVY-PVHLNP---VVREAVFPVL---KGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQE  284 (373)
T ss_dssp             HHHC-----TTSEEEE-ECCSCH---HHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHH
T ss_pred             hhhc-----ccceeee-eecccc---cchhhhhhhh---cccccceeeccchHHHHHHHhhhceeEeccc-----chhhh
Confidence            7765     5666544 333321   2222222222   3346899999999999999999999999876     55788


Q ss_pred             HHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHH
Q psy15555        395 ECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGF  473 (488)
Q Consensus       395 Ea~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~  473 (488)
                      ||..+|+|+|.-...+.+++-++.+    .+ .++. |.+++.+++..++. +++.+..+....    .-|.-...++++
T Consensus       285 Ea~~lg~P~Inir~~~eRqeg~~~g----~n-vlv~~d~~~I~~~i~~~l~-~~~~~~~~~~~~----npYGdG~as~rI  354 (373)
T d1v4va_         285 EGAALGVPVVVLRNVTERPEGLKAG----IL-KLAGTDPEGVYRVVKGLLE-NPEELSRMRKAK----NPYGDGKAGLMV  354 (373)
T ss_dssp             HHHHTTCCEEECSSSCSCHHHHHHT----SE-EECCSCHHHHHHHHHHHHT-CHHHHHHHHHSC----CSSCCSCHHHHH
T ss_pred             cchhhcCcEEEeCCCccCHHHHhcC----ee-EEcCCCHHHHHHHHHHHHc-CHHHHhhcccCC----CCCCCCHHHHHH
Confidence            9999999999985544554555554    33 4454 99999999999998 888777665421    445555666777


Q ss_pred             HHHHHHhhhhh
Q psy15555        474 LTFTQPLFKVM  484 (488)
Q Consensus       474 ~~~~~~~~~~~  484 (488)
                      .+.+.+.+...
T Consensus       355 ~~~L~~~~~~~  365 (373)
T d1v4va_         355 ARGVAWRLGLG  365 (373)
T ss_dssp             HHHHHHHTTSS
T ss_pred             HHHHHHHhCCC
Confidence            77777666543

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.27  E-value=2.8e-09  Score=99.78  Aligned_cols=275  Identities=12%  Similarity=0.067  Sum_probs=155.4

Q ss_pred             HHHHHHhhhcCCcEEEecCCccchh--hhhhhhCCCeeEEEEeCCccchHHHHHHHhhhhcccCccccccCccchhhhHH
Q psy15555        149 ILGVEALLSFQPDIYIDTMGYAFTY--PLFSYIGGSKVACYIHYPTITKEMLTRVARRVITHNNSQRVANNPILTSFKLF  226 (488)
Q Consensus       149 ~~~~~~l~~~~pDiii~~~~~~~~~--~~~~~~~~~~~v~~~h~p~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (488)
                      ....+.+.+.+||+++....-...+  .+++...++|++- +|.-..+.+                     ...+...-.
T Consensus        78 ~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~H-iegG~~s~~---------------------~~~~~~de~  135 (377)
T d1o6ca_          78 VRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGH-VEAGLRTGN---------------------KYSPFPEEL  135 (377)
T ss_dssp             HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSC---------------------TTTTTTHHH
T ss_pred             HhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEE-Eeccccccc---------------------ccccCchhh
Confidence            4456788899999776544322222  3444467888743 332211100                     000011111


Q ss_pred             HHHHHHHHHHHHhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhhccC-------CCCCCCCeEEEEeecc
Q psy15555        227 YYKVFALLYSHVGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLKKIT-------HSKTDGPVKIISVAQF  298 (488)
Q Consensus       227 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~~~~-------~~~~~~~~~i~~~g~~  298 (488)
                      .+.       .+-+.+|..++.++..++++.+.+-.+.++.+++++ +|.-......       .....++.+++..-+.
T Consensus       136 ~R~-------~iskls~~hf~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~  208 (377)
T d1o6ca_         136 NRQ-------MTGAIADLHFAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRR  208 (377)
T ss_dssp             HHH-------HHHHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC---
T ss_pred             hcc-------ccccceeEEeecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHhhhhhhhccCCceEEEEeccc
Confidence            111       233558999999999999999987777789999987 4432111111       1112334445554443


Q ss_pred             CCC-CChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHH-HHhcCCCCcEEEecCCChHHHHHHHHh
Q psy15555        299 RPE-KDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDL-CKHLSLENNVEFKVNLPYEDMKKEFSE  376 (488)
Q Consensus       299 ~~~-k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~-~~~~~l~~~v~~~g~~~~~el~~~~~~  376 (488)
                      +.. +.....++++..+....     ++..+ +.+.++..       ..... .+.....+++.+...+++.+...+++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~-i~~~~~~~-------~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~  275 (377)
T d1o6ca_         209 ENLGEPMENMFKAIRRIVGEF-----EDVQV-VYPVHLNP-------VVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAK  275 (377)
T ss_dssp             -------HHHHHHHHHHHHHC-----TTEEE-EEC----C-------HHHHHHHHC--CCSSEEECCCCCHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHhhcccc-----ccccc-cccccccc-------ccchhhhhccccccceEeccccchHHHHHHHhh
Confidence            332 22334555555555554     45554 44444321       12222 222334578999999999999999999


Q ss_pred             CcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHH
Q psy15555        377 GLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQ  455 (488)
Q Consensus       377 ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~  455 (488)
                      |+++++-|     |-.+.||..+|+|+|.-.....+.+-++.+     +-.+++ |.+++.+++.+++. +++..+.+.+
T Consensus       276 s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-----~nilv~~~~~~I~~~i~~~l~-~~~~~~~~~~  344 (377)
T d1o6ca_         276 SHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-----TLKLAGTDEENIYQLAKQLLT-DPDEYKKMSQ  344 (377)
T ss_dssp             CSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTT-----SSEEECSCHHHHHHHHHHHHH-CHHHHHHHHH
T ss_pred             hheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhhcC-----eeEECCCCHHHHHHHHHHHHh-ChHHHhhhcc
Confidence            99999866     456889999999999875543344555443     344555 99999999999998 8777665533


Q ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHh
Q psy15555        456 NAVSSVDRFSMEEFKNGFLTFTQPL  480 (488)
Q Consensus       456 ~a~~~~~~~s~~~~~~~~~~~~~~~  480 (488)
                      ..    .-|.-...++++.+++.+-
T Consensus       345 ~~----npYGdG~as~rI~~~L~~~  365 (377)
T d1o6ca_         345 AS----NPYGDGEASRRIVEELLFH  365 (377)
T ss_dssp             CC----CTTCCSCHHHHHHHHHHHH
T ss_pred             CC----CCCCCChHHHHHHHHHHHh
Confidence            21    3454445556666655543

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.13  E-value=1.5e-08  Score=94.50  Aligned_cols=215  Identities=8%  Similarity=0.042  Sum_probs=137.0

Q ss_pred             HhcccCEEEEcChhHHHHHHHHhccCCceEEEcCC-CCchhhh-----------cc--CC---CCCCCCeEEEEeeccCC
Q psy15555        238 VGKYSDIIMVNSSWTEEHVIQLWNCQLKTYKLYPP-CDTEDLK-----------KI--TH---SKTDGPVKIISVAQFRP  300 (488)
Q Consensus       238 ~~~~~d~ii~~s~~~~~~~~~~~~~~~k~~vi~~~-~d~~~~~-----------~~--~~---~~~~~~~~i~~~g~~~~  300 (488)
                      +-+.+|.-++.++..++++.+.+-.+.++.+++++ +|.-...           ..  ..   ....++.+++..-+.+.
T Consensus       138 iskls~~hf~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~  217 (376)
T d1f6da_         138 TGHLAMYHFSPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRES  217 (376)
T ss_dssp             HHHTCSEEEESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSS
T ss_pred             hccceeEEEeccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceEEEecccchh
Confidence            33568999999999999999988777889999987 5421100           00  00   11123344544444332


Q ss_pred             -CCChHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCCChHHHHHHHHhCcE
Q psy15555        301 -EKDHPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNLPYEDMKKEFSEGLI  379 (488)
Q Consensus       301 -~k~~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~~~~el~~~~~~ad~  379 (488)
                       .+....+++++..+.+..     .++.+ +.+.++..   .......+..   ...+++.+.+.+++.+...+++.|++
T Consensus       218 ~~~~~~~i~~~l~~~~~~~-----~~~~i-i~p~~~~~---~~~~~~~~~~---~~~~ni~~~~~l~~~~fl~ll~~a~~  285 (376)
T d1f6da_         218 FGRGFEEICHALADIATTH-----QDIQI-VYPVHLNP---NVREPVNRIL---GHVKNVILIDPQEYLPFVWLMNHAWL  285 (376)
T ss_dssp             CCHHHHHHHHHHHHHHHHC-----TTEEE-EEECCBCH---HHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred             hhhhHHHHHHHHhhhhhhc-----ceeEE-ecccccch---hhhhhHhhhh---cccccceeeccccHHHHHHHHhhceE
Confidence             233466677777776654     45554 45554321   2112222222   33568999999999999999999999


Q ss_pred             EEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccceecC-CHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy15555        380 GLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC-DEVEYAQTIKLILHLSQDTKTRISQNAV  458 (488)
Q Consensus       380 ~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~-~~~~l~~~i~~ll~~~~~~~~~~~~~a~  458 (488)
                      +++-|     |--+.||..+|+|+|.-..+.-..+-+..+     +-.++. |.+++.+++.+++. ++.....+...  
T Consensus       286 vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-----~~i~v~~~~~~I~~ai~~~l~-~~~~~~~~~~~--  352 (376)
T d1f6da_         286 ILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-----TVRLVGTDKQRIVEEVTRLLK-DENEYQAMSRA--  352 (376)
T ss_dssp             EEESS-----SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-----SEEECCSSHHHHHHHHHHHHH-CHHHHHHHHHS--
T ss_pred             EEecC-----cchHhhHHHhCCCEEEcCCCccCccceecC-----eeEECCCCHHHHHHHHHHHHh-ChHhhhhhccC--
Confidence            99877     557789999999999754332223444433     344454 89999999999998 76555443221  


Q ss_pred             HHHhhcCHHHHHHHHHHHHHH
Q psy15555        459 SSVDRFSMEEFKNGFLTFTQP  479 (488)
Q Consensus       459 ~~~~~~s~~~~~~~~~~~~~~  479 (488)
                        ..-|--...++++.+++++
T Consensus       353 --~npYGdG~as~rI~~iLk~  371 (376)
T d1f6da_         353 --HNPYGDGQACSRILEALKN  371 (376)
T ss_dssp             --CCTTCCSCHHHHHHHHHHH
T ss_pred             --CCCCCCChHHHHHHHHHHh
Confidence              1335555667777777764

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.02  E-value=1.5e-08  Score=95.90  Aligned_cols=108  Identities=8%  Similarity=-0.042  Sum_probs=74.0

Q ss_pred             CCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC
Q psy15555        355 LENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC  430 (488)
Q Consensus       355 l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~  430 (488)
                      +++++.+.+++|..   .++..+|++|.    .++..++.||+++|+|+|+.+..+    +. +.+++.    +.|...+
T Consensus       284 ~~~~v~~~~~~p~~---~ll~~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na-~~v~~~----G~g~~l~  351 (401)
T d1rrva_         284 DRDDCFAIDEVNFQ---ALFRRVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAAL----GIGVAHD  351 (401)
T ss_dssp             CCTTEEEESSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHH----TSEEECS
T ss_pred             CCCCEEEEeccCcH---HHhhhccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHH-HHHHHC----CCEEEcC
Confidence            46889999999755   45778999986    455678999999999999988754    22 344444    6787764


Q ss_pred             ----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhh
Q psy15555        431 ----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLF  481 (488)
Q Consensus       431 ----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~  481 (488)
                          ++++|+++|.++++  ++.    .+++++..+....+. +.+-.+.+++.+
T Consensus       352 ~~~~~~~~L~~ai~~vl~--~~~----r~~a~~~~~~~~~~g-~~~aa~~ie~~~  399 (401)
T d1rrva_         352 GPTPTFESLSAALTTVLA--PET----RARAEAVAGMVLTDG-AAAAADLVLAAV  399 (401)
T ss_dssp             SSCCCHHHHHHHHHHHTS--HHH----HHHHHHHTTTCCCCH-HHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhC--HHH----HHHHHHHHHHHhhcC-HHHHHHHHHHHh
Confidence                68999999999985  443    334444444443332 344555555544

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.91  E-value=8.1e-08  Score=90.27  Aligned_cols=110  Identities=12%  Similarity=0.017  Sum_probs=73.0

Q ss_pred             CCCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCc-------cceeccCCCccccce
Q psy15555        355 LENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPK-------MDIVIEDPETCRNGF  427 (488)
Q Consensus       355 l~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~-------~eiv~~~~~~~~~g~  427 (488)
                      .++++.+.+++|..   .+++.+|++|..+    +..++.||+++|+|+|+.+..+..       .+.+.+.    +.|+
T Consensus       268 ~~~~v~i~~~~p~~---~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~----G~g~  336 (391)
T d1pn3a_         268 DGADCFVVGEVNLQ---ELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAEL----GVGV  336 (391)
T ss_dssp             CCTTCCEESSCCHH---HHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHH----TSEE
T ss_pred             CCCCEEEecccCHH---HHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHC----CCEE
Confidence            36789999999754   4578999988753    346899999999999998865421       1334444    5777


Q ss_pred             ecC----CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhhh
Q psy15555        428 LAC----DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSMEEFKNGFLTFTQPLFK  482 (488)
Q Consensus       428 ~~~----~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~~~~~~~~~~~~~~~~~  482 (488)
                      .++    ++++++++|.++++ + +.    .+++++..+....+. +++-.+.+++.+.
T Consensus       337 ~l~~~~~~~~~l~~~i~~~l~-~-~~----r~~a~~~a~~~~~~g-~~~aa~~i~~~l~  388 (391)
T d1pn3a_         337 AVDGPVPTIDSLSAALDTALA-P-EI----RARATTVADTIRADG-TTVAAQLLFDAVS  388 (391)
T ss_dssp             EECCSSCCHHHHHHHHHHHTS-T-TH----HHHHHHHGGGSCSCH-HHHHHHHHHHHHH
T ss_pred             EcCcCCCCHHHHHHHHHHHhC-H-HH----HHHHHHHHHHHHhcC-HHHHHHHHHHHHH
Confidence            764    68999999999996 4 33    334444444443332 2344455555544

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.74  E-value=1.6e-05  Score=75.73  Aligned_cols=97  Identities=12%  Similarity=-0.027  Sum_probs=65.2

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCC----ccceeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGP----KMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~----~~eiv~~~~~~~~~g~~~~-  430 (488)
                      +.++.+..+.+..++. .+..+|+||.    .++..++.||+.+|+|+|+.+..+-    ...+++..    +.|+..+ 
T Consensus       329 ~~n~~v~~~~pq~~~l-~~p~~~~fIt----HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~----G~G~~l~~  399 (461)
T d2acva1         329 EGKGMICGWAPQVEVL-AHKAIGGFVS----HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW----GVGLGLRV  399 (461)
T ss_dssp             HCSEEEESSCCHHHHH-HSTTEEEEEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS----CCEEESCS
T ss_pred             CCCeEEEecCCHHHHH-hcccCCEEEe----cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHh----CceEEeec
Confidence            4678888887766554 5788899886    3445689999999999999877432    11234444    5666542 


Q ss_pred             ---------CHHHHHHHHHHHHccCHHHHH---HHHHHHHHHH
Q psy15555        431 ---------DEVEYAQTIKLILHLSQDTKT---RISQNAVSSV  461 (488)
Q Consensus       431 ---------~~~~l~~~i~~ll~~~~~~~~---~~~~~a~~~~  461 (488)
                               +.+++++++.+++++|+..++   ++++.+++.+
T Consensus       400 ~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~  442 (461)
T d2acva1         400 DYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAV  442 (461)
T ss_dssp             SCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHT
T ss_pred             cccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence                     578999999999972443443   3444444444

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=98.71  E-value=1.6e-06  Score=81.34  Aligned_cols=77  Identities=12%  Similarity=-0.114  Sum_probs=60.1

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCC----CccceeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGG----PKMDIVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~----~~~eiv~~~~~~~~~g~~~~-  430 (488)
                      ++|+.+.+++|..   .+|..+|++|.    .+++.++.||+++|+|+|+.+..+    +. +.+++.    +.|...+ 
T Consensus       284 ~~nv~~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na-~~l~~~----G~g~~l~~  351 (401)
T d1iira_         284 GADCFAIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYA-GRVAEL----GVGVAHDG  351 (401)
T ss_dssp             GGGEEECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHH----TSEEECSS
T ss_pred             CCCEEEEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHH-HHHHHC----CCEEEcCc
Confidence            5789999999654   56888999985    466788999999999999987644    22 334444    5777754 


Q ss_pred             ---CHHHHHHHHHHHHc
Q psy15555        431 ---DEVEYAQTIKLILH  444 (488)
Q Consensus       431 ---~~~~l~~~i~~ll~  444 (488)
                         ++++++++|.++++
T Consensus       352 ~~~~~~~l~~ai~~~l~  368 (401)
T d1iira_         352 PIPTFDSLSAALATALT  368 (401)
T ss_dssp             SSCCHHHHHHHHHHHTS
T ss_pred             CCCCHHHHHHHHHHHhC
Confidence               79999999999995

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.34  E-value=0.00049  Score=64.92  Aligned_cols=83  Identities=11%  Similarity=-0.053  Sum_probs=60.8

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---c-eeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---D-IVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---e-iv~~~~~~~~~g~~~~-  430 (488)
                      +.++.+..++|+.++.. ...+++||.    -|+..++.||+.+|+|+|+.+..+-..   . +.+..    +.|...+ 
T Consensus       318 ~~nv~~~~~~pq~~lL~-hp~~~~fIt----HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~----G~G~~l~~  388 (450)
T d2c1xa1         318 RGYGMVVPWAPQAEVLA-HEAVGAFVT----HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL----EIGVRIEG  388 (450)
T ss_dssp             TTTEEEESCCCHHHHHT-STTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS----CCEEECGG
T ss_pred             cccccccccCChHhhhc-cCceeEEEc----cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHc----CcEEEecC
Confidence            56899999998765432 356777775    344568999999999999988754321   1 22344    5777664 


Q ss_pred             ---CHHHHHHHHHHHHccCHH
Q psy15555        431 ---DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       431 ---~~~~l~~~i~~ll~~~~~  448 (488)
                         +.+++.++|.++++ |+.
T Consensus       389 ~~~t~~~l~~ai~~vL~-d~~  408 (450)
T d2c1xa1         389 GVFTKSGLMSCFDQILS-QEK  408 (450)
T ss_dssp             GSCCHHHHHHHHHHHHH-SHH
T ss_pred             CCcCHHHHHHHHHHHhc-CcH
Confidence               78999999999999 764

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=98.24  E-value=0.0002  Score=68.12  Aligned_cols=114  Identities=12%  Similarity=-0.014  Sum_probs=75.6

Q ss_pred             CCcEEEecCCChHHHHHHH--HhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc----ceeccCCCccccceec
Q psy15555        356 ENNVEFKVNLPYEDMKKEF--SEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM----DIVIEDPETCRNGFLA  429 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~--~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~----eiv~~~~~~~~~g~~~  429 (488)
                      ++||.+..++|+.++   +  ..+++||.    -|+..++.||+.+|+|+|+.+..+-..    .+.+..    +.|...
T Consensus       345 ~~Nv~~~~~~Pq~~l---L~hp~~~~fIt----HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~----G~G~~l  413 (473)
T d2pq6a1         345 ADRGLIASWCPQDKV---LNHPSIGGFLT----HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEW----EIGMEI  413 (473)
T ss_dssp             TTTEEEESCCCHHHH---HTSTTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS----CCEEEC
T ss_pred             cCceEEeeeCCHHHH---hcCCcCcEEEe----cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHc----CeEEee
Confidence            578999999987654   5  56777886    344568999999999999988743211    133443    567776


Q ss_pred             C---CHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhcCH-----HHHHHHHHHHHHHhhh
Q psy15555        430 C---DEVEYAQTIKLILHLSQDTKTRISQNAVSSVDRFSM-----EEFKNGFLTFTQPLFK  482 (488)
Q Consensus       430 ~---~~~~l~~~i~~ll~~~~~~~~~~~~~a~~~~~~~s~-----~~~~~~~~~~~~~~~~  482 (488)
                      +   +.++++++|.++++ |+.. +++.++|++..+..-.     ..-...+.+++++++.
T Consensus       414 ~~~~t~~~l~~ai~~vl~-d~~~-~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~~~~  472 (473)
T d2pq6a1         414 DTNVKREELAKLINEVIA-GDKG-KKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL  472 (473)
T ss_dssp             CSSCCHHHHHHHHHHHHT-SHHH-HHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred             CCCcCHHHHHHHHHHHHc-CChH-HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence            5   79999999999998 8653 3455555554422110     0123345666777653

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=7.7e-05  Score=68.19  Aligned_cols=103  Identities=10%  Similarity=-0.017  Sum_probs=61.9

Q ss_pred             CeEEEEeecc-CCCCC--hHHHHHHHHHhHHhhhhhccCceEEEEEecCCCCCcHHHHHHHHHHHHhcCCCCcEEEecCC
Q psy15555        289 PVKIISVAQF-RPEKD--HPLQLRAMYQLRQIISEELWDNLKLIFIGSTRNEEDEVCVKDMQDLCKHLSLENNVEFKVNL  365 (488)
Q Consensus       289 ~~~i~~~g~~-~~~k~--~~~ll~a~~~l~~~~~~~~~~~~~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~~~v~~~g~~  365 (488)
                      ..+++..|.- ...|.  .+...+....+.++       +..++++|...+   .+..+++.+..........+.+.|..
T Consensus       181 ~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~-------~~~ivl~g~~~e---~~~~~~~~~~~~~~~~~~~~~l~g~~  250 (348)
T d1pswa_         181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-------GYQVVLFGSAKD---HEAGNEILAALNTEQQAWCRNLAGET  250 (348)
T ss_dssp             CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-------TCEEEECCCGGG---HHHHHHHHTTSCHHHHTTEEECTTTS
T ss_pred             CeEEeccccchhhccccchHHHhhhHHHHhhc-------CCccccccccch---HHHHHHHHHhhhcccccccccccCCc
Confidence            3444555432 23354  34466666666554       456777775432   12222322221111112335567888


Q ss_pred             ChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEe
Q psy15555        366 PYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAH  406 (488)
Q Consensus       366 ~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~  406 (488)
                      +-.|+..+++.||++|.+.     +-.+--|.++|+|+|+-
T Consensus       251 sl~el~~li~~a~l~I~~D-----tg~~HlAaa~g~p~i~l  286 (348)
T d1pswa_         251 QLDQAVILIAACKAIVTND-----SGLMHVAAALNRPLVAL  286 (348)
T ss_dssp             CHHHHHHHHHTSSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred             cHHHHHHHHhcceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence            8899999999999999865     33567789999999994

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.85  E-value=0.0053  Score=57.72  Aligned_cols=83  Identities=12%  Similarity=0.041  Sum_probs=59.5

Q ss_pred             CCcEEEecCCChHHHHHHHHhCcEEEEcCCCCcCCccHHHHHHcCCcEEEeCCCCCcc---c-eeccCCCccccceecC-
Q psy15555        356 ENNVEFKVNLPYEDMKKEFSEGLIGLHAMWNEHFGIGIVECMAAGLIMIAHKSGGPKM---D-IVIEDPETCRNGFLAC-  430 (488)
Q Consensus       356 ~~~v~~~g~~~~~el~~~~~~ad~~v~~s~~e~~g~~~lEa~a~G~PvI~~~~~~~~~---e-iv~~~~~~~~~g~~~~-  430 (488)
                      ++||.+.+++|+.++.. ...+++||.    -++..++.||+.+|+|+|+.+..+-..   . +.+..    +.|+... 
T Consensus       333 ~~nv~~~~w~Pq~~lL~-hp~~~~fVt----HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~l----G~Gv~l~~  403 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLA-HPSTGGFLT----HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDI----RAALRPRA  403 (471)
T ss_dssp             TTEEEEESCCCHHHHHH-STTEEEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTT----CCEECCCC
T ss_pred             CCCeeecccCCHHHHhc-CccCCEEEe----cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHh----eeEEEEec
Confidence            57899999998876533 256777875    344568999999999999987743211   1 23433    4666441 


Q ss_pred             ------CHHHHHHHHHHHHccCHH
Q psy15555        431 ------DEVEYAQTIKLILHLSQD  448 (488)
Q Consensus       431 ------~~~~l~~~i~~ll~~~~~  448 (488)
                            +.+++.++|.++++ |++
T Consensus       404 ~~~~~~t~~~l~~ai~~vl~-~~~  426 (471)
T d2vcha1         404 GDDGLVRREEVARVVKGLME-GEE  426 (471)
T ss_dssp             CTTSCCCHHHHHHHHHHHHT-STH
T ss_pred             CCCCcCCHHHHHHHHHHHhC-CcH
Confidence                  77999999999998 754

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.001  Score=65.77  Aligned_cols=188  Identities=13%  Similarity=0.020  Sum_probs=125.9

Q ss_pred             HHhcccCEEEEcChhHHHHHHHHhc------cCCceEEEcCCCCchhhhcc-----------------C-----------
Q psy15555        237 HVGKYSDIIMVNSSWTEEHVIQLWN------CQLKTYKLYPPCDTEDLKKI-----------------T-----------  282 (488)
Q Consensus       237 ~~~~~~d~ii~~s~~~~~~~~~~~~------~~~k~~vi~~~~d~~~~~~~-----------------~-----------  282 (488)
                      .++..+..+-.+|+-..+..++.+.      .+.++.-+-||+....+...                 .           
T Consensus       409 LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~  488 (796)
T d1l5wa_         409 LCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEK  488 (796)
T ss_dssp             HHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGG
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHh
Confidence            3455677889999888776665332      13468888898876544210                 0           


Q ss_pred             -------------------------------CCCCCCCeEEEEeeccCCCCChHHHHHHHHHhHHhhhh---hccCceEE
Q psy15555        283 -------------------------------HSKTDGPVKIISVAQFRPEKDHPLQLRAMYQLRQIISE---ELWDNLKL  328 (488)
Q Consensus       283 -------------------------------~~~~~~~~~i~~~g~~~~~k~~~~ll~a~~~l~~~~~~---~~~~~~~l  328 (488)
                                                     ....++...++++-|+...|...+++.-...+.....+   ....++++
T Consensus       489 ~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~  568 (796)
T d1l5wa_         489 FADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVF  568 (796)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEE
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEE
Confidence                                           00345778999999999999988754443333222111   11125889


Q ss_pred             EEEec-CCCCCcHHHHHHHHHHHHhcC--------C--CCcEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHH
Q psy15555        329 IFIGS-TRNEEDEVCVKDMQDLCKHLS--------L--ENNVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVE  395 (488)
Q Consensus       329 ~ivG~-~~~~~~~~~~~~l~~~~~~~~--------l--~~~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lE  395 (488)
                      +++|. +|..   ...+++-+++.+..        +  .-+|.|+...+-.--..+...||+.+..|  ..|..|.+-+=
T Consensus       569 IfaGKAhP~d---~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMK  645 (796)
T d1l5wa_         569 LFGAKAAPGY---YLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMK  645 (796)
T ss_dssp             EEECCCCTTC---HHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHH
T ss_pred             EEcCCCCCch---HHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHH
Confidence            99995 4533   33344433332211        1  12699999988788888999999999988  57999999999


Q ss_pred             HHHcCCcEEEeCCCCCccceeccCCCccccceecC
Q psy15555        396 CMAAGLIMIAHKSGGPKMDIVIEDPETCRNGFLAC  430 (488)
Q Consensus       396 a~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~~~~  430 (488)
                      |+..|.+.+++-.|... |+.++.  +.+|||++.
T Consensus       646 aalNG~lnlstlDGw~v-E~~~~v--g~eN~f~fG  677 (796)
T d1l5wa_         646 LALNGALTVGTLDGANV-EIAEKV--GEENIFIFG  677 (796)
T ss_dssp             HHHTTCEEEECSCTTHH-HHHHHH--CGGGSEECS
T ss_pred             HHHcCCeeeecccchHH-HHHHhc--CccceEEec
Confidence            99999999999888876 777641  116888875

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.61  E-value=0.0012  Score=65.30  Aligned_cols=139  Identities=14%  Similarity=0.101  Sum_probs=98.0

Q ss_pred             CCCCCeEEEEeeccCCCCChHH----HHHHHHHhHHhhhhhccCceEEEEEec-CCCCCcHHHHHHHHHHHHhc----CC
Q psy15555        285 KTDGPVKIISVAQFRPEKDHPL----QLRAMYQLRQIISEELWDNLKLIFIGS-TRNEEDEVCVKDMQDLCKHL----SL  355 (488)
Q Consensus       285 ~~~~~~~i~~~g~~~~~k~~~~----ll~a~~~l~~~~~~~~~~~~~l~ivG~-~~~~~~~~~~~~l~~~~~~~----~l  355 (488)
                      ..++...++++-|+...|...+    ++..+.++++... ....+.++++.|. +|..   ...+++-+++.+.    +.
T Consensus       546 ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~-~~~~P~q~IFaGKAhP~d---~~gK~iIk~I~~va~~in~  621 (824)
T d2gj4a1         546 INPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPN-KFVVPRTVMIGGKAAPGY---HMAKMIIKLITAIGDVVNH  621 (824)
T ss_dssp             CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTT-SCCCCEEEEEECCCCTTC---HHHHHHHHHHHHHHHHHTT
T ss_pred             CCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhccc-CCCCCeEEEEeCCCCCcc---HHHHHHHHHHHHHHHHHhc
Confidence            3467788999999999999876    3333455554321 1123678999995 4543   3334444433322    11


Q ss_pred             ------CCcEEEecCCChHHHHHHHHhCcEEEEcC--CCCcCCccHHHHHHcCCcEEEeCCCCCccceeccCCCccccce
Q psy15555        356 ------ENNVEFKVNLPYEDMKKEFSEGLIGLHAM--WNEHFGIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNGF  427 (488)
Q Consensus       356 ------~~~v~~~g~~~~~el~~~~~~ad~~v~~s--~~e~~g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g~  427 (488)
                            .-+|.|+....-.--..++..||+....|  ..|..|.+-+=+|..|.+.+++-.|.+. |+.++.  .++|||
T Consensus       622 dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnv-Ei~~~v--g~~N~~  698 (824)
T d2gj4a1         622 DPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANV-EMAEEA--GEENFF  698 (824)
T ss_dssp             CTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHH-HHHHHH--CGGGSE
T ss_pred             ChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHH-HHHHhc--CcccEE
Confidence                  12589999988888888999999999888  5789999999999999999999988876 777641  126788


Q ss_pred             ecC
Q psy15555        428 LAC  430 (488)
Q Consensus       428 ~~~  430 (488)
                      .+.
T Consensus       699 ~fG  701 (824)
T d2gj4a1         699 IFG  701 (824)
T ss_dssp             ECS
T ss_pred             EeC
Confidence            875

>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/glutamate racemase
family: Aspartate/glutamate racemase
domain: Glutamate racemase
species: Aquifex pyrophilus [TaxId: 2714]

Probab=91.66  E-value=0.18  Score=35.49  Aligned_cols=34  Identities=21%  Similarity=0.426  Sum_probs=24.5

Q ss_pred             cEEEEeccCCCCCCCceehHHHHHHHHHHhCCCeeEEEEeCC
Q psy15555         53 KTVAFFHPYCNAGGGGERVLWTAVLALHQKYPDYKIYIYTGD   94 (488)
Q Consensus        53 ~rI~~~~~~~~~~gG~e~~~~~l~~~L~~~~~~~~v~~~~~~   94 (488)
                      |||+++-  ++.+|      ..+.+++.+..|+.+++.+..+
T Consensus         1 mkIgifD--SGiGG------LtVl~~l~~~lP~~~~iY~~D~   34 (105)
T d1b74a1           1 MKIGIFD--SGVGG------LTVLKAIRNRYRKVDIVYLGDT   34 (105)
T ss_dssp             CEEEEEE--SSSTH------HHHHHHHHHHSSSCEEEEEECG
T ss_pred             CEEEEEe--CCCCH------HHHHHHHHHHCCCCCEEEEecC
Confidence            7899874  33344      5566888998999888776655

>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein TM1055
species: Thermotoga maritima [TaxId: 2336]

Probab=91.34  E-value=1.4  Score=34.13  Aligned_cols=72  Identities=15%  Similarity=0.014  Sum_probs=43.9

Q ss_pred             HHHHHHHHhCcEEEEcCCCCcCCc--cHHHHHHcCCcEEEeCCCCCccceeccC--------CCccccceecCCHHHHHH
Q psy15555        368 EDMKKEFSEGLIGLHAMWNEHFGI--GIVECMAAGLIMIAHKSGGPKMDIVIED--------PETCRNGFLACDEVEYAQ  437 (488)
Q Consensus       368 ~el~~~~~~ad~~v~~s~~e~~g~--~~lEa~a~G~PvI~~~~~~~~~eiv~~~--------~~~~~~g~~~~~~~~l~~  437 (488)
                      +....++..||++|...  .+.|.  -++|++..++|||.-+..+...+.+.+.        +.....-.+++|++++.+
T Consensus        88 ~Rk~~m~~~sda~I~lP--GG~GTl~El~~a~~l~KPiilln~~g~w~~~i~~~~~~~~~i~~~~~~~i~~~~~~ee~~~  165 (170)
T d1rcua_          88 MRSFVLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQ  165 (170)
T ss_dssp             HHHHHHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHH
T ss_pred             hhHHHHhhcccceeeec--cccchHHHHHHHHHhCCceEEecCCCchHHHHHHHHHHCCCCCHHHcCeEEEeCCHHHHHH
Confidence            45666789999776532  23332  3678999999999987644333333211        011123334568888888


Q ss_pred             HHHH
Q psy15555        438 TIKL  441 (488)
Q Consensus       438 ~i~~  441 (488)
                      .|++
T Consensus       166 ~l~~  169 (170)
T d1rcua_         166 IIEQ  169 (170)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            7765

>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=85.33  E-value=3.8  Score=31.72  Aligned_cols=108  Identities=7%  Similarity=0.022  Sum_probs=61.4

Q ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHhcCCC----------------CcEEEecCCChHHHHHHHHhCcE-EEEcCCCCcC
Q psy15555        327 KLIFIGSTRNEEDEVCVKDMQDLCKHLSLE----------------NNVEFKVNLPYEDMKKEFSEGLI-GLHAMWNEHF  389 (488)
Q Consensus       327 ~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~----------------~~v~~~g~~~~~el~~~~~~ad~-~v~~s~~e~~  389 (488)
                      -++++|+|....    .+++.++++.++++                ..+-..|.........++..||+ ++.++.....
T Consensus        22 Pvii~G~G~~~a----~~~l~~lae~~~~Pv~tt~~~~g~~~~~h~~~~G~~G~~g~~~~~~~~~~aDlil~lG~~l~~~   97 (179)
T d1ybha1          22 PVLYVGGGCLNS----SDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDR   97 (179)
T ss_dssp             EEEEECGGGTTC----HHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHH
T ss_pred             eEEEECHHHHHH----HHHHHHHHhhhcccceecccccCCCccccccccccCCCcCCHHHHHHHHhhhhhhhcccccccc
Confidence            478888774321    26788999988875                12223344334566789999994 4455543321


Q ss_pred             CccHHHHHHcCCcEEEeCCCCCccceeccCCCccccc-eecCCHHHHHHHHHHHHc
Q psy15555        390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRNG-FLACDEVEYAQTIKLILH  444 (488)
Q Consensus       390 g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g-~~~~~~~~l~~~i~~ll~  444 (488)
                      ...-.+...-+..+|.-+....  ++-...    ... -++.|.....++|.+.+.
T Consensus        98 ~~~~~~~~~~~~kiI~Id~d~~--~~~~~~----~~~~~i~~D~~~~l~~L~~~l~  147 (179)
T d1ybha1          98 VTGKLEAFASRAKIVHIDIDSA--EIGKNK----TPHVSVCGDVKLALQGMNKVLE  147 (179)
T ss_dssp             HHSSGGGTTTTSEEEEEESCTT--TTTSSS----CCSEEEESCHHHHHHHHHHHHH
T ss_pred             ccccccccCCCCeEEEEeCccc--cccccc----CCCceEEeccHHHHHHHHHHHH
Confidence            1111233456778888776432  333222    222 234588877777776664

>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.45  E-value=6  Score=30.22  Aligned_cols=111  Identities=6%  Similarity=-0.038  Sum_probs=60.4

Q ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHhcCCC----------------CcEEEecCCChHHHHHHHHhCc-EEEEcCCC---
Q psy15555        327 KLIFIGSTRNEEDEVCVKDMQDLCKHLSLE----------------NNVEFKVNLPYEDMKKEFSEGL-IGLHAMWN---  386 (488)
Q Consensus       327 ~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~----------------~~v~~~g~~~~~el~~~~~~ad-~~v~~s~~---  386 (488)
                      -++++|.|-.... +-.+++.++++.+|++                ..+-..|..........+..|| +++.++..   
T Consensus        13 Pvii~G~G~~~~~-~a~~~l~~lae~~g~Pv~tt~~~~g~~~~~hp~~~G~~g~~~~~~a~~~~~~~Dlvl~~G~~l~~~   91 (171)
T d1t9ba1          13 PVLYVGAGILNHA-DGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDR   91 (171)
T ss_dssp             EEEEECGGGGGST-THHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCTT
T ss_pred             eEEEECcChhhhh-hHHHHHHHHHHhcCCceeecccccccccCCcccccccccccccHHHHhhhhcccceeecccccccc
Confidence            3677887631110 2336788888888875                1223334443456778999999 45555522   


Q ss_pred             CcCCccH------HHHHHcCCcEEEeCCCCCccceeccCCCccccc-eecCCHHHHHHHHHHHHc
Q psy15555        387 EHFGIGI------VECMAAGLIMIAHKSGGPKMDIVIEDPETCRNG-FLACDEVEYAQTIKLILH  444 (488)
Q Consensus       387 e~~g~~~------lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~g-~~~~~~~~l~~~i~~ll~  444 (488)
                      .+++.+.      ....--+..+|.-+...  .++-...    ... -++.|..+..++|.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~iI~Id~d~--~el~~~~----~~d~~i~~D~~~~l~~L~~~l~  150 (171)
T d1t9ba1          92 VTGNISKFAPEARRAAAEGRGGIIHFEVSP--KNINKVV----QTQIAVEGDATTNLGKMMSKIF  150 (171)
T ss_dssp             TSCSGGGSSHHHHHHHHTTSCEEEEEESCG--GGSSSSS----CCSEEEESCHHHHHHHHHTTSC
T ss_pred             cccccchhhhhhhhcccCCCceEEEEeCCc--cccCCcc----cCceeEEEcHHHHHHHHHHhcc
Confidence            2233322      23345577787665432  1332222    222 234478777777766654

>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate decarboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.30  E-value=4.3  Score=31.42  Aligned_cols=80  Identities=10%  Similarity=0.052  Sum_probs=43.8

Q ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHhcCCC---------------Cc-E-EEecCCChHHHHHHHHhCc-EEEEcCCCCc
Q psy15555        327 KLIFIGSTRNEEDEVCVKDMQDLCKHLSLE---------------NN-V-EFKVNLPYEDMKKEFSEGL-IGLHAMWNEH  388 (488)
Q Consensus       327 ~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~---------------~~-v-~~~g~~~~~el~~~~~~ad-~~v~~s~~e~  388 (488)
                      -++|+|.+-...  ...+++.++++.++++               .+ + .+.|.........++..|| +++.++....
T Consensus        33 Pvii~G~g~~~~--~a~~~l~~lae~~~~Pv~tt~~gkg~~~e~hp~~~G~~~g~~~~~~~~~~~~~aDlvl~lG~~~~d  110 (179)
T d1pvda1          33 PVILADACCSRH--DVKAETKKLIDLTQFPAFVTPMGKGSISEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSD  110 (179)
T ss_dssp             EEEEECGGGTTT--STHHHHHHHHHHHCCCEEECGGGTTSSCTTSTTEEEECCSTTSCHHHHHHHHTCSEEEEESCCCCC
T ss_pred             CEEEEecccchh--hhHHHHHHHHHhhCceEEecccccccccccccccccccccccCCHHHHHHhhcCCEEEEEcCCccc
Confidence            478888775332  2348888888888874               11 2 1345555678889999999 4555554332


Q ss_pred             CCccHHHHHHcCCcEEEeCC
Q psy15555        389 FGIGIVECMAAGLIMIAHKS  408 (488)
Q Consensus       389 ~g~~~lEa~a~G~PvI~~~~  408 (488)
                      +.........-+.-+|.-+.
T Consensus       111 ~~t~~~~~~~~~~~iI~i~~  130 (179)
T d1pvda1         111 FNTGSFSYSYKTKNIVEFHS  130 (179)
T ss_dssp             ----------CCCEEEEEET
T ss_pred             cccCcCcccCCCCcEEEEeC
Confidence            22222333344555665544

>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=80.57  E-value=11  Score=29.15  Aligned_cols=106  Identities=8%  Similarity=0.080  Sum_probs=60.1

Q ss_pred             EEEEEecCCCCCcHHHHHHHHHHHHhcCCC-------------CcEEEec---CCChHHHHHHHHhCcE-EEEcCCCCcC
Q psy15555        327 KLIFIGSTRNEEDEVCVKDMQDLCKHLSLE-------------NNVEFKV---NLPYEDMKKEFSEGLI-GLHAMWNEHF  389 (488)
Q Consensus       327 ~l~ivG~~~~~~~~~~~~~l~~~~~~~~l~-------------~~v~~~g---~~~~~el~~~~~~ad~-~v~~s~~e~~  389 (488)
                      -++++|.|-..    ..+++.++++.+|++             ++-.+.|   .........++..||+ ++.++.....
T Consensus        33 Pvii~G~G~~~----a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~aDlil~vG~~l~~~  108 (183)
T d2ez9a1          33 PLIYYGIGARK----AGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFA  108 (183)
T ss_dssp             EEEEECGGGTT----CHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESCCCTTT
T ss_pred             eEEEEcCCccc----chHHHHHHhhccceEEEeeccccccccccCccccccccccccHHHHhhhhccCceEEeecccCcc
Confidence            57888887532    237788999988875             1112233   2234677889999994 4455533221


Q ss_pred             CccHHHHHHcCCcEEEeCCCCCccceeccCCCcccc-ceecCCHHHHHHHHHHHHc
Q psy15555        390 GIGIVECMAAGLIMIAHKSGGPKMDIVIEDPETCRN-GFLACDEVEYAQTIKLILH  444 (488)
Q Consensus       390 g~~~lEa~a~G~PvI~~~~~~~~~eiv~~~~~~~~~-g~~~~~~~~l~~~i~~ll~  444 (488)
                      ..  .+...-+..+|.-+...  .++-...    .. --++.|..+..++|.+.+.
T Consensus       109 ~~--~~~~~~~~~iI~Id~d~--~~i~~~~----~~~~~i~~D~~~~l~~L~~~l~  156 (183)
T d2ez9a1         109 EV--SKAFKNTRYFLQIDIDP--AKLGKRH----KTDIAVLADAQKTLAAILAQVS  156 (183)
T ss_dssp             TT--TTTTTTCSEEEEEESCG--GGTTSSS----CCSEEEESCHHHHHHHHHHTCC
T ss_pred             cc--eeecccccchheeeccH--HHHhhcC----CCCeEEEECHHHHHHHHHHHhh
Confidence            11  12345577888765532  2332222    11 1233478888888777775