Psyllid ID: psy15604

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980------
MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
cccHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHcccccEEEEEcc
cHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHcccHccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHccHcccHEEHccccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHcccccHHHHHHHHHHHHHcccccHHcccHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHccccccccEEEEEEEc
MEMVAALVHAISnsndlettkgavgtlhnlshHRQGLLAIFKSGGIPALVKLLSKTLVTassnntlilqddadLATRAIPELIKLlndedqddadLATRAIPELIKLlndedqddadLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISnsndlettkgavgtlhnlshHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAmhlghpsqrLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAetieaegatapltdllhsrnEGVEILIQGVHKIFKIHKInihrgclmfpetleegieipstqfdtaqptavqrltepsQMLKHAVVNLInyqddadlATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISnsndlettkgavgtlhnlshHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAmhlghpsqrLVQNCLWTLRnlsdagtkvDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNagdreeitepadhsvnmwqQQNYLvdsgihsgvntnapsltgkeedmdgdQLMFEMDqgfgqgftqDQVTVCQVGGVEALVQTIVNagdreeitePAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVnllnppsrwpLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRaftdtqrvsrtglffrsflggvvvktltw
MEMVAALVHAisnsndleTTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNntlilqddadLATRAIPELIKllndedqddADLATRAIPELIkllndedqddADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEgatapltdllhSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQrvsrtglffrsflggvvvktltw
MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKegaetieaegataPLTDLLHSRNEGVEILIQGVhkifkihkinihRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGlesllqslvqllasqDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMdqgfgqgftqdqVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
******LVHAI*******TTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDE****ADLATRAIPELIKLLND*****ADLATRAIPELIKLLNDEDQVVVSQAAMMV******************MVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQF***************QMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVH*****************MVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEIT***DHSVNMWQQQNYLVDSGIH***********************FEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTL**
MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
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MEMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVSLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQNYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALCQANHAPLREYGAIHLLVILLNRAFTDTQRVSRTGLFFRSFLGGVVVKTLTW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query986 2.2.26 [Sep-21-2011]
Q7QHW5 850 Armadillo segment polarit yes N/A 0.359 0.416 0.899 0.0
Q17GS9 832 Armadillo segment polarit N/A N/A 0.359 0.425 0.896 0.0
Q02453 813 Armadillo segment polarit N/A N/A 0.359 0.435 0.888 0.0
Q29I35 832 Armadillo segment polarit yes N/A 0.359 0.425 0.885 0.0
P18824 843 Armadillo segment polarit no N/A 0.359 0.419 0.885 0.0
P35224 818 Catenin beta OS=Urechis c N/A N/A 0.358 0.431 0.841 1e-175
P35223 820 Catenin beta OS=Tripneust N/A N/A 0.359 0.431 0.814 1e-169
Q0VCX4 781 Catenin beta-1 OS=Bos tau yes N/A 0.359 0.453 0.787 1e-167
P35222 781 Catenin beta-1 OS=Homo sa yes N/A 0.359 0.453 0.787 1e-167
Q02248 781 Catenin beta-1 OS=Mus mus yes N/A 0.359 0.453 0.787 1e-167
>sp|Q7QHW5|ARM_ANOGA Armadillo segment polarity protein OS=Anopheles gambiae GN=arm PE=3 SV=5 Back     alignment and function desciption
 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/367 (89%), Positives = 338/367 (92%), Gaps = 13/367 (3%)

Query: 440 MFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELI 499
           MFPETLEEGIEIPSTQFD  QPTAVQRL EPSQMLKHAVVNLINYQDDADLATRAIPELI
Sbjct: 103 MFPETLEEGIEIPSTQFDPQQPTAVQRLAEPSQMLKHAVVNLINYQDDADLATRAIPELI 162

Query: 500 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGT 559
           KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALV A+SNSNDLETTKGAVGT
Sbjct: 163 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRALSNSNDLETTKGAVGT 222

Query: 560 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 619
           LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQ+GSKMAVRLAG
Sbjct: 223 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAG 282

Query: 620 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
           GLQKMV LL RNNVKFLAIVTDCLQILAYGNQESKLIILAS GP ELVRIMRSYDYEKLL
Sbjct: 283 GLQKMVALLQRNNVKFLAIVTDCLQILAYGNQESKLIILASTGPSELVRIMRSYDYEKLL 342

Query: 680 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDG 739
           W TSRVLKVLSVCSSNKPAIVEAGGMQALAMHLG+PSQRLVQNCLWTLRNLSDA TKVDG
Sbjct: 343 WTTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGNPSQRLVQNCLWTLRNLSDAATKVDG 402

Query: 740 LESLLQSLVQLLASQDINVITCAAG-------------VTVCQVGGVEALVQTIVNAGDR 786
           LE+LL  LV +L S D+NV+TCAAG             VTVCQVGGVEALV TI+NAGDR
Sbjct: 403 LETLLSGLVTVLGSSDVNVVTCAAGILSNLTCNNQRNKVTVCQVGGVEALVGTIINAGDR 462

Query: 787 EEITEPA 793
           EEITEPA
Sbjct: 463 EEITEPA 469
May associate with CadN and participate in the transmission of developmental information. Can associate with alpha-catenin. Accumulates through wg signaling; arm function in wg signal transduction is required early in development for determination of neuroblast fate. Arm and Abl proteins function cooperatively at adherens junctions in both the CNS and epidermis.
Anopheles gambiae (taxid: 7165)
>sp|Q17GS9|ARM_AEDAE Armadillo segment polarity protein OS=Aedes aegypti GN=arm PE=3 SV=1 Back     alignment and function description
>sp|Q02453|ARM_MUSDO Armadillo segment polarity protein OS=Musca domestica GN=arm PE=2 SV=1 Back     alignment and function description
>sp|Q29I35|ARM_DROPS Armadillo segment polarity protein OS=Drosophila pseudoobscura pseudoobscura GN=arm PE=3 SV=2 Back     alignment and function description
>sp|P18824|ARM_DROME Armadillo segment polarity protein OS=Drosophila melanogaster GN=arm PE=1 SV=1 Back     alignment and function description
>sp|P35224|CTNB_URECA Catenin beta OS=Urechis caupo PE=2 SV=1 Back     alignment and function description
>sp|P35223|CTNB_TRIGR Catenin beta OS=Tripneustes gratilla PE=2 SV=1 Back     alignment and function description
>sp|Q0VCX4|CTNB1_BOVIN Catenin beta-1 OS=Bos taurus GN=CTNNB1 PE=2 SV=1 Back     alignment and function description
>sp|P35222|CTNB1_HUMAN Catenin beta-1 OS=Homo sapiens GN=CTNNB1 PE=1 SV=1 Back     alignment and function description
>sp|Q02248|CTNB1_MOUSE Catenin beta-1 OS=Mus musculus GN=Ctnnb1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query986
242002974814 Armadillo segment polarity protein, puta 0.359 0.434 0.910 0.0
242002978781 Armadillo segment polarity protein, puta 0.359 0.453 0.910 0.0
307212553810 Armadillo segment polarity protein [Harp 0.359 0.437 0.901 0.0
347965016850 AGAP001043-PA [Anopheles gambiae str. PE 0.359 0.416 0.899 0.0
357620839817 putative armadillo protein [Danaus plexi 0.359 0.433 0.896 0.0
170040980837 armadillo [Culex quinquefasciatus] gi|16 0.359 0.422 0.896 0.0
157132852832 armadillo [Aedes aegypti] gi|122106728|s 0.359 0.425 0.896 0.0
312383441824 hypothetical protein AND_03438 [Anophele 0.359 0.429 0.896 0.0
345496035751 PREDICTED: armadillo segment polarity pr 0.359 0.471 0.896 0.0
156555532811 PREDICTED: armadillo segment polarity pr 0.359 0.436 0.896 0.0
>gi|242002974|ref|XP_002422562.1| Armadillo segment polarity protein, putative [Pediculus humanus corporis] gi|212505352|gb|EEB09824.1| Armadillo segment polarity protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/367 (91%), Positives = 341/367 (92%), Gaps = 13/367 (3%)

Query: 440 MFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELI 499
           MFPETLEEGIEIPSTQFD  QPTAVQRL EPSQMLKHAVVNLINYQDDADLATRAIPELI
Sbjct: 110 MFPETLEEGIEIPSTQFDPGQPTAVQRLAEPSQMLKHAVVNLINYQDDADLATRAIPELI 169

Query: 500 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGT 559
           KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNS QMVAALVHAIS+SNDLETTKGAVGT
Sbjct: 170 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSHQMVAALVHAISSSNDLETTKGAVGT 229

Query: 560 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 619
           LHNLSHHRQGLLAIFKSGGI ALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG
Sbjct: 230 LHNLSHHRQGLLAIFKSGGITALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 289

Query: 620 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
           GLQKMV LL RNNVKFLAIVTDCLQILAYGNQESKLIILASQGP+ELVRIMRSYDYEKLL
Sbjct: 290 GLQKMVALLQRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPIELVRIMRSYDYEKLL 349

Query: 680 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDG 739
           W TSRVLK LSVC SNKPAIVEAGGMQALAMHLGH SQRLVQNCLWTLRNLSDAGTKVDG
Sbjct: 350 WTTSRVLKALSVCVSNKPAIVEAGGMQALAMHLGHQSQRLVQNCLWTLRNLSDAGTKVDG 409

Query: 740 LESLLQSLVQLLASQDINVITCAAG-------------VTVCQVGGVEALVQTIVNAGDR 786
           LE+LLQSLVQLLAS D+NV+TCAAG             VTVCQV GV+ALV+TIVNAGDR
Sbjct: 410 LEALLQSLVQLLASTDVNVVTCAAGVLSNLTCNNQRNKVTVCQVNGVDALVRTIVNAGDR 469

Query: 787 EEITEPA 793
           EEITEPA
Sbjct: 470 EEITEPA 476

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242002978|ref|XP_002422564.1| Armadillo segment polarity protein, putative [Pediculus humanus corporis] gi|212505354|gb|EEB09826.1| Armadillo segment polarity protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307212553|gb|EFN88276.1| Armadillo segment polarity protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|347965016|ref|XP_309245.5| AGAP001043-PA [Anopheles gambiae str. PEST] gi|387912927|sp|Q7QHW5.5|ARM_ANOGA RecName: Full=Armadillo segment polarity protein gi|333466584|gb|EAA04913.5| AGAP001043-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|357620839|gb|EHJ72882.1| putative armadillo protein [Danaus plexippus] Back     alignment and taxonomy information
>gi|170040980|ref|XP_001848258.1| armadillo [Culex quinquefasciatus] gi|167864558|gb|EDS27941.1| armadillo [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157132852|ref|XP_001662670.1| armadillo [Aedes aegypti] gi|122106728|sp|Q17GS9.1|ARM_AEDAE RecName: Full=Armadillo segment polarity protein gi|108881633|gb|EAT45858.1| AAEL002887-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|312383441|gb|EFR28530.1| hypothetical protein AND_03438 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|345496035|ref|XP_003427628.1| PREDICTED: armadillo segment polarity protein isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|156555532|ref|XP_001603109.1| PREDICTED: armadillo segment polarity protein isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query986
FB|FBgn0000117 843 arm "armadillo" [Drosophila me 0.359 0.419 0.855 1.4e-207
UNIPROTKB|Q29I35 832 arm "Armadillo segment polarit 0.359 0.425 0.855 1.4e-207
UNIPROTKB|A1A5I6 780 ctnnb1 "Ctnnb1 protein" [Xenop 0.359 0.453 0.765 1.5e-188
UNIPROTKB|Q7ZX35 781 ctnnb1 "Ctnnb1-prov protein" [ 0.359 0.453 0.765 1.5e-188
UNIPROTKB|P26233 781 ctnnb1 "Catenin beta" [Xenopus 0.359 0.453 0.760 1.4e-187
ZFIN|ZDB-GENE-040426-2575 778 ctnnb2 "catenin, beta 2" [Dani 0.359 0.455 0.752 1.1e-185
UNIPROTKB|Q4H3U7 769 Ci-beta-catenin "Beta-catenin" 0.359 0.460 0.728 1e-178
UNIPROTKB|Q7QHW5 850 arm "Armadillo segment polarit 0.359 0.416 0.877 2.5e-161
UNIPROTKB|Q17GS9 832 arm "Armadillo segment polarit 0.359 0.425 0.874 8.4e-161
UNIPROTKB|Q8SPJ1745 JUP "Junction plakoglobin" [Bo 0.353 0.468 0.663 1e-156
FB|FBgn0000117 arm "armadillo" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1534 (545.1 bits), Expect = 1.4e-207, Sum P(2) = 1.4e-207
 Identities = 314/367 (85%), Positives = 327/367 (89%)

Query:   440 MFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELI 499
             MFPETLEEGIEIPSTQFD  QPTAVQRL+EPSQMLKHAVVNLINYQDDA+LATRAIPELI
Sbjct:   106 MFPETLEEGIEIPSTQFDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDAELATRAIPELI 165

Query:   500 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGT 559
             KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALV AISNSNDLE+TK AVGT
Sbjct:   166 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLESTKAAVGT 225

Query:   560 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 619
             LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQ+GSKMAVRLAG
Sbjct:   226 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDGSKMAVRLAG 285

Query:   620 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
             GLQKMV LL RNNVKFLAIVTDCLQILAYGNQESKLIILAS GP ELVRIMRSYDYEKLL
Sbjct:   286 GLQKMVTLLQRNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNELVRIMRSYDYEKLL 345

Query:   680 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDG 739
             W TSRVLKVLSVCSSNKPAIV+AGGMQALAMHLG+ S RLVQNCLWTLRNLSDA TKV+G
Sbjct:   346 WTTSRVLKVLSVCSSNKPAIVDAGGMQALAMHLGNMSPRLVQNCLWTLRNLSDAATKVEG 405

Query:   740 XXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEALVQTIVNAGDR 786
                            D+NV+TCAAG+             TVCQVGGV+ALV+TI+NAGDR
Sbjct:   406 LEALLQSLVQVLGSTDVNVVTCAAGILSNLTCNNQRNKATVCQVGGVDALVRTIINAGDR 465

Query:   787 EEITEPA 793
             EEITEPA
Sbjct:   466 EEITEPA 472
GO:0005915 "zonula adherens" evidence=IDA
GO:0016055 "Wnt receptor signaling pathway" evidence=ISS;NAS;IMP
GO:0005737 "cytoplasm" evidence=NAS;IDA
GO:0005912 "adherens junction" evidence=NAS;IDA
GO:0060914 "heart formation" evidence=IMP
GO:0003136 "negative regulation of heart induction by canonical Wnt receptor signaling pathway" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0014017 "neuroblast fate commitment" evidence=IMP
GO:0045296 "cadherin binding" evidence=IBA;IMP
GO:0046667 "compound eye retinal cell programmed cell death" evidence=IMP
GO:0016324 "apical plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=NAS
GO:0045294 "alpha-catenin binding" evidence=IBA;NAS
GO:0016342 "catenin complex" evidence=ISS;IBA;NAS
GO:0007400 "neuroblast fate determination" evidence=NAS
GO:0030707 "ovarian follicle cell development" evidence=TAS
GO:0035153 "epithelial cell type specification, open tracheal system" evidence=IMP
GO:0048754 "branching morphogenesis of an epithelial tube" evidence=IMP
GO:0035147 "branch fusion, open tracheal system" evidence=IMP
GO:0007016 "cytoskeletal anchoring at plasma membrane" evidence=ISS;IBA
GO:0008092 "cytoskeletal protein binding" evidence=ISS
GO:0030720 "oocyte localization involved in germarium-derived egg chamber formation" evidence=TAS
GO:0016327 "apicolateral plasma membrane" evidence=TAS
GO:0007391 "dorsal closure" evidence=IGI;IMP
GO:0030424 "axon" evidence=IDA
GO:0005914 "spot adherens junction" evidence=NAS
GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0007163 "establishment or maintenance of cell polarity" evidence=NAS
GO:0035019 "somatic stem cell maintenance" evidence=IMP
GO:0048477 "oogenesis" evidence=IMP
GO:0001745 "compound eye morphogenesis" evidence=IMP
GO:0007155 "cell adhesion" evidence=IMP
GO:0008360 "regulation of cell shape" evidence=IMP
GO:0001105 "RNA polymerase II transcription coactivator activity" evidence=IPI
GO:0003713 "transcription coactivator activity" evidence=IDA
GO:0016337 "cell-cell adhesion" evidence=IMP
GO:0014019 "neuroblast development" evidence=IMP
GO:0007370 "ventral furrow formation" evidence=IMP
GO:0000902 "cell morphogenesis" evidence=IMP
GO:0045186 "zonula adherens assembly" evidence=IMP
GO:0035017 "cuticle pattern formation" evidence=IMP
GO:0046530 "photoreceptor cell differentiation" evidence=IMP
GO:0060232 "delamination" evidence=IMP
GO:0007472 "wing disc morphogenesis" evidence=IMP
GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP
GO:0007399 "nervous system development" evidence=IMP
GO:0019900 "kinase binding" evidence=IPI
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP
GO:0001709 "cell fate determination" evidence=IMP
GO:0035293 "chitin-based larval cuticle pattern formation" evidence=IMP
GO:0007507 "heart development" evidence=IMP
GO:0019901 "protein kinase binding" evidence=IBA
GO:0030018 "Z disc" evidence=IBA
GO:0005667 "transcription factor complex" evidence=IBA
GO:0048599 "oocyte development" evidence=IBA
GO:0005198 "structural molecule activity" evidence=IBA
GO:0005829 "cytosol" evidence=IBA
GO:0030877 "beta-catenin destruction complex" evidence=IBA
GO:0030057 "desmosome" evidence=IBA
GO:0005916 "fascia adherens" evidence=IBA
GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IBA
GO:0016323 "basolateral plasma membrane" evidence=IBA
GO:0009898 "internal side of plasma membrane" evidence=IBA
UNIPROTKB|Q29I35 arm "Armadillo segment polarity protein" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] Back     alignment and assigned GO terms
UNIPROTKB|A1A5I6 ctnnb1 "Ctnnb1 protein" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q7ZX35 ctnnb1 "Ctnnb1-prov protein" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|P26233 ctnnb1 "Catenin beta" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2575 ctnnb2 "catenin, beta 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q4H3U7 Ci-beta-catenin "Beta-catenin" [Ciona intestinalis (taxid:7719)] Back     alignment and assigned GO terms
UNIPROTKB|Q7QHW5 arm "Armadillo segment polarity protein" [Anopheles gambiae (taxid:7165)] Back     alignment and assigned GO terms
UNIPROTKB|Q17GS9 arm "Armadillo segment polarity protein" [Aedes aegypti (taxid:7159)] Back     alignment and assigned GO terms
UNIPROTKB|Q8SPJ1 JUP "Junction plakoglobin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q29I35ARM_DROPSNo assigned EC number0.88550.35900.4254yesN/A
Q02248CTNB1_MOUSENo assigned EC number0.78740.35900.4532yesN/A
Q9WU82CTNB1_RATNo assigned EC number0.78740.35900.4532yesN/A
P35222CTNB1_HUMANNo assigned EC number0.78740.35900.4532yesN/A
Q7QHW5ARM_ANOGANo assigned EC number0.89910.35900.4164yesN/A
Q0VCX4CTNB1_BOVINNo assigned EC number0.78740.35900.4532yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query986
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 1e-14
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 1e-14
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 9e-11
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 1e-09
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 4e-09
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 4e-09
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 2e-08
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 7e-07
pfam0051441 pfam00514, Arm, Armadillo/beta-catenin-like repeat 9e-07
pfam0051441 pfam00514, Arm, Armadillo/beta-catenin-like repeat 9e-07
smart0018541 smart00185, ARM, Armadillo/beta-catenin-like repea 2e-06
smart0018541 smart00185, ARM, Armadillo/beta-catenin-like repea 2e-06
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 5e-06
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 6e-06
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 8e-06
cd00020120 cd00020, ARM, Armadillo/beta-catenin-like repeats 2e-05
pfam0051441 pfam00514, Arm, Armadillo/beta-catenin-like repeat 4e-05
pfam0051441 pfam00514, Arm, Armadillo/beta-catenin-like repeat 4e-05
smart0018541 smart00185, ARM, Armadillo/beta-catenin-like repea 4e-05
smart0018541 smart00185, ARM, Armadillo/beta-catenin-like repea 4e-05
pfam01602522 pfam01602, Adaptin_N, Adaptin N terminal region 4e-04
PLN03200 2102 PLN03200, PLN03200, cellulose synthase-interactive 4e-04
PLN03200 2102 PLN03200, PLN03200, cellulose synthase-interactive 4e-04
COG1413335 COG1413, COG1413, FOG: HEAT repeat [Energy product 7e-04
COG1413335 COG1413, COG1413, FOG: HEAT repeat [Energy product 7e-04
PLN03200 2102 PLN03200, PLN03200, cellulose synthase-interactive 0.001
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information 
 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 199 LAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGR 258
            A+ ++GG+PALV LLSS  E+V   A   L NL      +  AV  AGGL  +V LL  
Sbjct: 1   EAVIQAGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKS 60

Query: 259 NNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLS 318
            + + +      L+ LA G +++KLI+L + G  +LV ++ S + E +    +  L  L+
Sbjct: 61  EDEEVVKAALWALRNLAAGPEDNKLIVLEAGGVPKLVNLLDSSN-EDIQKNATGALSNLA 119

An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model. Length = 120
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|201276 pfam00514, Arm, Armadillo/beta-catenin-like repeat Back     alignment and domain information
>gnl|CDD|201276 pfam00514, Arm, Armadillo/beta-catenin-like repeat Back     alignment and domain information
>gnl|CDD|214547 smart00185, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|214547 smart00185, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|237987 cd00020, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|201276 pfam00514, Arm, Armadillo/beta-catenin-like repeat Back     alignment and domain information
>gnl|CDD|201276 pfam00514, Arm, Armadillo/beta-catenin-like repeat Back     alignment and domain information
>gnl|CDD|214547 smart00185, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|214547 smart00185, ARM, Armadillo/beta-catenin-like repeats Back     alignment and domain information
>gnl|CDD|216598 pfam01602, Adaptin_N, Adaptin N terminal region Back     alignment and domain information
>gnl|CDD|215629 PLN03200, PLN03200, cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>gnl|CDD|215629 PLN03200, PLN03200, cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>gnl|CDD|224331 COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|224331 COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215629 PLN03200, PLN03200, cellulose synthase-interactive protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 986
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 100.0
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 100.0
COG5064526 SRP1 Karyopherin (importin) alpha [Intracellular t 100.0
KOG0166|consensus514 100.0
KOG1048|consensus717 100.0
KOG4224|consensus550 100.0
KOG4224|consensus550 100.0
COG5064526 SRP1 Karyopherin (importin) alpha [Intracellular t 99.96
KOG0166|consensus514 99.96
PF05804708 KAP: Kinesin-associated protein (KAP) 99.95
PF05804708 KAP: Kinesin-associated protein (KAP) 99.93
KOG1048|consensus717 99.8
KOG4500|consensus604 99.79
KOG2122|consensus 2195 99.75
KOG2122|consensus 2195 99.69
KOG4500|consensus604 99.65
KOG1222|consensus791 99.62
KOG4199|consensus461 99.62
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 99.61
KOG4199|consensus461 99.6
KOG1293|consensus678 99.57
KOG1222|consensus791 99.52
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 99.46
KOG1293|consensus678 99.43
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 99.43
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 99.43
KOG2171|consensus 1075 99.41
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 99.38
KOG2171|consensus 1075 99.38
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 99.35
KOG1241|consensus859 99.34
PRK09687280 putative lyase; Provisional 99.31
cd00256429 VATPase_H VATPase_H, regulatory vacuolar ATP synth 99.3
PRK09687280 putative lyase; Provisional 99.25
KOG2023|consensus885 99.25
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 99.23
PTZ00429746 beta-adaptin; Provisional 99.19
KOG1824|consensus1233 99.14
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 99.13
KOG2023|consensus885 99.12
KOG1824|consensus 1233 99.12
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 99.11
PTZ00429746 beta-adaptin; Provisional 99.11
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 99.06
COG5215858 KAP95 Karyopherin (importin) beta [Intracellular t 99.06
KOG0168|consensus 1051 99.05
KOG2759|consensus442 99.0
cd00256429 VATPase_H VATPase_H, regulatory vacuolar ATP synth 98.94
KOG0946|consensus970 98.89
KOG0168|consensus1051 98.86
KOG1241|consensus859 98.83
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 98.76
KOG1062|consensus866 98.72
COG5215858 KAP95 Karyopherin (importin) beta [Intracellular t 98.68
KOG0213|consensus1172 98.68
KOG2160|consensus342 98.66
KOG1789|consensus2235 98.61
KOG2160|consensus342 98.6
KOG0213|consensus1172 98.6
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 98.59
KOG0946|consensus970 98.57
PF05536543 Neurochondrin: Neurochondrin 98.56
KOG4413|consensus524 98.52
KOG3678|consensus832 98.47
KOG4646|consensus173 98.44
KOG1059|consensus877 98.43
KOG2759|consensus442 98.43
KOG2973|consensus353 98.32
KOG1789|consensus2235 98.31
KOG0212|consensus675 98.28
KOG4646|consensus173 98.28
COG5181975 HSH155 U2 snRNP spliceosome subunit [RNA processin 98.22
KOG1060|consensus968 98.2
KOG3678|consensus832 98.16
KOG1062|consensus866 98.15
PF05536543 Neurochondrin: Neurochondrin 98.13
KOG1061|consensus734 98.11
KOG4413|consensus524 98.11
KOG1061|consensus734 98.1
KOG0915|consensus1702 98.09
KOG1060|consensus 968 98.02
TIGR02270410 conserved hypothetical protein. Members are found 98.0
KOG0212|consensus675 97.99
TIGR02270410 conserved hypothetical protein. Members are found 97.98
KOG1242|consensus569 97.94
COG5240 898 SEC21 Vesicle coat complex COPI, gamma subunit [In 97.94
KOG1077|consensus 938 97.93
PF14664371 RICTOR_N: Rapamycin-insensitive companion of mTOR, 97.91
KOG1077|consensus938 97.87
KOG1059|consensus877 97.86
PRK14707 2710 hypothetical protein; Provisional 97.84
KOG2973|consensus353 97.83
PF0051441 Arm: Armadillo/beta-catenin-like repeat; InterPro: 97.82
KOG1242|consensus569 97.82
COG5369743 Uncharacterized conserved protein [Function unknow 97.77
KOG0211|consensus759 97.68
PRK14707 2710 hypothetical protein; Provisional 97.64
PF0051441 Arm: Armadillo/beta-catenin-like repeat; InterPro: 97.63
KOG0211|consensus759 97.61
KOG1517|consensus1387 97.56
COG5240898 SEC21 Vesicle coat complex COPI, gamma subunit [In 97.51
KOG2734|consensus536 97.51
COG1413335 FOG: HEAT repeat [Energy production and conversion 97.46
COG1413335 FOG: HEAT repeat [Energy production and conversion 97.46
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 97.45
COG5181975 HSH155 U2 snRNP spliceosome subunit [RNA processin 97.43
PF14664371 RICTOR_N: Rapamycin-insensitive companion of mTOR, 97.39
KOG2734|consensus536 97.32
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 97.29
KOG1517|consensus 1387 97.26
COG5231432 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene 97.23
KOG0915|consensus 1702 97.2
PF10165446 Ric8: Guanine nucleotide exchange factor synembryn 97.19
KOG2259|consensus823 97.15
PF09759102 Atx10homo_assoc: Spinocerebellar ataxia type 10 pr 97.12
KOG4535|consensus728 97.1
KOG1078|consensus865 97.06
PF10165446 Ric8: Guanine nucleotide exchange factor synembryn 96.97
smart0018541 ARM Armadillo/beta-catenin-like repeats. Approx. 4 96.97
smart0018541 ARM Armadillo/beta-catenin-like repeats. Approx. 4 96.85
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 96.71
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 96.7
KOG1058|consensus 948 96.6
KOG4203|consensus473 96.59
KOG1240|consensus 1431 96.47
COG5369743 Uncharacterized conserved protein [Function unknow 96.45
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 96.39
KOG2259|consensus 823 96.3
PF09759102 Atx10homo_assoc: Spinocerebellar ataxia type 10 pr 96.3
PF11841160 DUF3361: Domain of unknown function (DUF3361) 96.25
COG5231432 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Ene 96.23
KOG1240|consensus 1431 96.22
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 96.18
KOG0567|consensus289 96.12
KOG0567|consensus289 96.11
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 96.07
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 96.01
KOG1943|consensus1133 95.87
KOG0414|consensus1251 95.65
PF11841160 DUF3361: Domain of unknown function (DUF3361) 95.58
COG5096757 Vesicle coat complex, various subunits [Intracellu 95.56
KOG4535|consensus 728 95.5
COG5096 757 Vesicle coat complex, various subunits [Intracellu 95.42
KOG1058|consensus948 95.22
PF08045257 CDC14: Cell division control protein 14, SIN compo 95.12
KOG4151|consensus748 95.02
PF11698119 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011 94.99
PF13764802 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 94.94
PF11698119 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011 94.84
PF06025379 DUF913: Domain of Unknown Function (DUF913); Inter 94.79
PF04063192 DUF383: Domain of unknown function (DUF383); Inter 94.13
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 94.12
PF04078262 Rcd1: Cell differentiation family, Rcd1-like ; Int 93.9
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 93.84
PF04063192 DUF383: Domain of unknown function (DUF383); Inter 93.83
KOG3036|consensus293 93.7
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 93.63
PF06025379 DUF913: Domain of Unknown Function (DUF913); Inter 93.59
PF11701157 UNC45-central: Myosin-binding striated muscle asse 93.49
KOG1832|consensus 1516 93.44
KOG1991|consensus 1010 93.41
KOG1078|consensus 865 93.41
KOG1943|consensus1133 93.15
PF05004309 IFRD: Interferon-related developmental regulator ( 93.13
PF11701157 UNC45-central: Myosin-binding striated muscle asse 93.05
KOG2062|consensus929 92.99
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 92.96
KOG1991|consensus1010 92.9
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 92.79
KOG2274|consensus1005 92.78
KOG2062|consensus929 92.61
KOG4151|consensus748 92.56
KOG3036|consensus293 92.51
PF08045257 CDC14: Cell division control protein 14, SIN compo 92.38
PF05004309 IFRD: Interferon-related developmental regulator ( 92.16
PF13764802 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 91.89
PF12031257 DUF3518: Domain of unknown function (DUF3518); Int 91.83
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 91.78
PF08569335 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro 91.35
KOG1832|consensus 1516 91.33
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 90.77
PF08569335 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like pro 90.72
PF07814361 WAPL: Wings apart-like protein regulation of heter 90.44
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 90.21
KOG0414|consensus1251 90.16
KOG2999|consensus713 89.9
KOG1248|consensus1176 89.76
KOG2274|consensus1005 89.71
PF05918556 API5: Apoptosis inhibitory protein 5 (API5); Inter 89.59
PF04078262 Rcd1: Cell differentiation family, Rcd1-like ; Int 89.53
KOG2611|consensus698 88.98
PRK09169 2316 hypothetical protein; Validated 88.84
COG5116926 RPN2 26S proteasome regulatory complex component [ 88.24
PF08167165 RIX1: rRNA processing/ribosome biogenesis 87.86
KOG2025|consensus 892 87.26
KOG2611|consensus 698 87.26
PF07814361 WAPL: Wings apart-like protein regulation of heter 86.77
PF05918556 API5: Apoptosis inhibitory protein 5 (API5); Inter 86.5
PF1466873 RICTOR_V: Rapamycin-insensitive companion of mTOR, 85.85
PF06371187 Drf_GBD: Diaphanous GTPase-binding Domain; InterPr 85.42
KOG2999|consensus713 85.32
COG5116926 RPN2 26S proteasome regulatory complex component [ 84.98
KOG1967|consensus1030 84.53
KOG2025|consensus892 84.37
KOG2956|consensus516 84.36
PF1466873 RICTOR_V: Rapamycin-insensitive companion of mTOR, 84.28
KOG2137|consensus700 83.03
KOG2956|consensus516 82.3
KOG1820|consensus815 82.11
KOG2032|consensus533 82.1
PF06371187 Drf_GBD: Diaphanous GTPase-binding Domain; InterPr 81.55
KOG2032|consensus533 81.4
PF12530234 DUF3730: Protein of unknown function (DUF3730) ; I 81.36
PRK09169 2316 hypothetical protein; Validated 81.27
PF12530234 DUF3730: Protein of unknown function (DUF3730) ; I 80.92
KOG1967|consensus1030 80.62
PF1036392 DUF2435: Protein of unknown function (DUF2435) 80.57
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.8e-56  Score=540.01  Aligned_cols=786  Identities=18%  Similarity=0.170  Sum_probs=610.9

Q ss_pred             hHHHHHHHHhcC-CChhHHhhHHHHHHHhhc-ChhhHHHHHhcCCcHHHHHHHHhhhcCCCcccccccccccccccCcHH
Q psy15604          3 MVAALVHAISNS-NDLETTKGAVGTLHNLSH-HRQGLLAIFKSGGIPALVKLLSKTLVTASSNNTLILQDDADLATRAIP   80 (986)
Q Consensus         3 ~~~~lv~~l~~~-~d~~~~~~a~~~L~~l~~-~~~~~~~i~~~g~i~~Ll~ll~~~l~~~~~~~~~~~~~~~~~~~g~i~   80 (986)
                      .+..+|+-|++. .+++.++.++..|..++. ++++|..+.+.+                                |++|
T Consensus        14 ~v~~Lve~L~s~~ss~~~~~~Al~~Lr~Lak~~~enR~~Ia~~a--------------------------------GaIP   61 (2102)
T PLN03200         14 SVAQCIEQLRAKSSSPQEKELTTARLLELAKTREEARKAIGSHS--------------------------------QAMP   61 (2102)
T ss_pred             HHHHHHHHHHcccCCHHHHHHHHHHHHHHHhcChHHHHHHHHcc--------------------------------CcHH
Confidence            467788888754 247778888999999985 566777776421                                4566


Q ss_pred             HHHHHhcCCChhhHHHHHhHHHHHHHhcCCCcchhHHHhCCCHHHHHHHHccCCHHHHHHHHHHHHHhcccC---cchhH
Q psy15604         81 ELIKLLNDEDQDDADLATRAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKE---ASRHA  157 (986)
Q Consensus        81 ~l~~ll~~~~~~~~~~a~~aL~~l~~~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~la~~~---~~~~~  157 (986)
                      .|+.+|++++...+..++.+|.++.   .+++++..++..|+||.|+.+|++++.+.+..|+.+|.+|+.++   .++..
T Consensus        62 ~LV~lL~sg~~~vk~nAaaaL~nLS---~~e~nk~~Iv~~GaIppLV~LL~sGs~eaKe~AA~AL~sLS~~~~~D~~~~~  138 (2102)
T PLN03200         62 LLVSLLRSGTLGAKVNAAAVLGVLC---KEEDLRVKVLLGGCIPPLLSLLKSGSAEAQKAAAEAIYAVSSGGLSDHVGSK  138 (2102)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHh---cCHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHHHHHHHHcCcchhhhhhh
Confidence            6666666666667777776665554   46777888899999999999999999999999999999999874   34545


Q ss_pred             hhhCCchHHHHHHHHhcCC--CHHHHHHHHHHHHhhccCccch-HHHHhcCChHHHHHhhCCCCHhHHHHHHHHHHHHhc
Q psy15604        158 IMNSPQMVAALVHAISNSN--DLETTKGAVGTLHNLSHHRQGL-LAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLL  234 (986)
Q Consensus       158 i~~~~~~i~~Lv~lL~~~~--~~~~~~~a~~~L~~ls~~~~~~-~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~L~~  234 (986)
                      ++...|.++.|+.+|+++.  |..+++.++.+|.||+..++++ ..+++.|+||.|+.+|+++++..+..|+.+|.+++.
T Consensus       139 I~v~~GaVp~Lv~lL~~gsk~d~~L~~~Av~AL~nLs~~~en~~~~IIeaGaVp~LV~LLsS~d~~lQ~eAa~aLa~Las  218 (2102)
T PLN03200        139 IFSTEGVVPSLWDQLQPGNKQDKVVEGLLTGALRNLCGSTDGFWSATLEAGGVDILVKLLSSGNSDAQANAASLLARLMM  218 (2102)
T ss_pred             hhhhcCChHHHHHHHhCCchhhHHHHHHHHHHHHHHhcCccchHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHc
Confidence            5433345799999999753  3446788899999999998776 566899999999999999999999999999999997


Q ss_pred             CCCCchHHHHHcCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhccChhhHHHHHhCCCHHHHHHHHhcCCh--------HH
Q psy15604        235 HQEGSKMAVRLAGGLQKMVLLLGR-NNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDY--------EK  305 (986)
Q Consensus       235 ~~~~~~~~i~~~g~i~~L~~ll~~-~~~~~~~~a~~aL~~La~~~~~~~~~~~~~g~v~~L~~ll~~~~~--------~~  305 (986)
                      ++++.+..+.+.|+||.|+++|++ .++.++..|+++|.+|+.++++.+..+++.|+++.|++++..++.        ..
T Consensus       219 s~ee~~~aVIeaGaVP~LV~LL~sg~~~~VRE~AA~AL~nLAs~s~e~r~~Iv~aGgIp~LI~lL~sp~~e~~~~~~~~~  298 (2102)
T PLN03200        219 AFESSISKVLDAGAVKQLLKLLGQGNEVSVRAEAAGALEALSSQSKEAKQAIADAGGIPALINATVAPSKEFMQGEFAQA  298 (2102)
T ss_pred             CChHHHHHHHHCCCHHHHHHHHccCCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCcchhhhccccchH
Confidence            777789999999999999999976 456899999999999999999999999999999999999986542        23


Q ss_pred             HHHHHHHHHHHhhhCCCChHHHHHhccHHHHHHHhCCCC-HHHHHHHHHHHhcc---ccc--------------cccccc
Q psy15604        306 LLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPS-QRLVQNCLWTLRNL---SDA--------------GTKVSL  367 (986)
Q Consensus       306 ~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~L~~ll~~~~-~~~~~~~~~~L~~l---s~~--------------~~~i~l  367 (986)
                      +++.+..+|.|++...        ...++.|.+.+.+.. ......+.|++..+   .+.              ..++.+
T Consensus       299 Lqe~AvwALsNIcgg~--------~~ll~~L~~ll~s~rd~~~~ada~gALayll~l~d~~~~~~~~i~~~~v~~~LV~L  370 (2102)
T PLN03200        299 LQENAMGALANICGGM--------SALILYLGELSESPRSPAPIADTLGALAYALMVFDSSAESTRAFDPTVIEQILVKL  370 (2102)
T ss_pred             HHHHHHHHHHHHhCCc--------hhhHHHHHHhhcccchHHHHHHHHhhHHHHHHhcCCchhhhhhccccccHHHHHHH
Confidence            5788888988887542        122333433333321 11122233333222   000              112455


Q ss_pred             ccCCchH-HHHHHHHHHHHHhhChhhHHHHHhcCCcHHHHHHhccCchhHHHHHHHHHHHHhhccccccccccccccchh
Q psy15604        368 LFNEIEN-IQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLE  446 (986)
Q Consensus       368 l~~~~~~-~~~~a~~~L~~l~~~~~~~~~l~~~g~l~~Lv~ll~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~  446 (986)
                      ++..++. ++..+..+|..+..|+..++.+.+.|+++.|+.++...+.+++..++.++  +.++.               
T Consensus       371 lr~k~p~~vqe~V~eALasl~gN~~l~~~L~~~daik~LV~LL~~~~~evQ~~Av~aL--~~L~~---------------  433 (2102)
T PLN03200        371 LKPRDTKLVQERIIEALASLYGNAYLSRKLNHAEAKKVLVGLITMATADVQEELIRAL--SSLCC---------------  433 (2102)
T ss_pred             hCCCCCchhHHHHHHHHHHhcCChHHHHHHHhccchhhhhhhhccCCHHHHHHHHHHH--HHHhC---------------
Confidence            6666555 48999999999999999999999999999999999998877766555443  32110               


Q ss_pred             hccCCCCCCCCCchhHHHHhcCCCcHHHHHHHHHHhcCCchhhhhcCCHHHHHHHhcCCCHHHHHHHHHHHHHhhhccc-
Q psy15604        447 EGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEA-  525 (986)
Q Consensus       447 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~a~~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~~~~~a~~~L~~l~~~~~-  525 (986)
                                             .+.+.+..           ....|++|.|+++|++++...|..|++++++++.... 
T Consensus       434 -----------------------~~~e~~~a-----------Ii~~ggIp~LV~LL~s~s~~iQ~~A~~~L~nLa~~nde  479 (2102)
T PLN03200        434 -----------------------GKGGLWEA-----------LGGREGVQLLISLLGLSSEQQQEYAVALLAILTDEVDE  479 (2102)
T ss_pred             -----------------------CCHHHHHH-----------HHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHH
Confidence                                   00111111           2347889999999999999999999999999987654 


Q ss_pred             cchhhhcccCcHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCccchhh-hhccCChHHHHHhcCCCCHhHHHHHHHHHHHh
Q psy15604        526 SRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLA-IFKSGGIPALVKLLSSPVESVLFYAITTLHNL  604 (986)
Q Consensus       526 ~~~~l~~~~~~i~~L~~lL~~~~~~~~~~~a~~~L~~ls~~~~~~~~-i~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~nl  604 (986)
                      .+..+++. |++|.|+++|.+. +..++++|+|+|.|++.++++... +.+.|++|+|+.+|++++.+++..|+|+|.|+
T Consensus       480 nr~aIiea-GaIP~LV~LL~s~-~~~iqeeAawAL~NLa~~~~qir~iV~~aGAIppLV~LL~sgd~~~q~~Aa~AL~nL  557 (2102)
T PLN03200        480 SKWAITAA-GGIPPLVQLLETG-SQKAKEDSATVLWNLCCHSEDIRACVESAGAVPALLWLLKNGGPKGQEIAAKTLTKL  557 (2102)
T ss_pred             HHHHHHHC-CCHHHHHHHHcCC-CHHHHHHHHHHHHHHhCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            57777775 9999999999765 889999999999999996655555 55789999999999999999999999999999


Q ss_pred             hcCCCCC-------------------------------------hHHHHHhCcHHHHHHhhcCCCHhHHHHHHHHHHHHh
Q psy15604        605 LLHQEGS-------------------------------------KMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILA  647 (986)
Q Consensus       605 ~~~~~~~-------------------------------------~~~v~~~g~v~~Lv~ll~~~~~~v~~~a~~aL~~L~  647 (986)
                      +.+.+..                                     +..+...|+++.|+++++++++.++..|+|+|.+++
T Consensus       558 i~~~d~~~I~~Lv~LLlsdd~~~~~~aL~vLgnIlsl~~~~d~~~~g~~~~ggL~~Lv~LL~sgs~~ikk~Aa~iLsnL~  637 (2102)
T PLN03200        558 VRTADAATISQLTALLLGDLPESKVHVLDVLGHVLSVASLEDLVREGSAANDALRTLIQLLSSSKEETQEKAASVLADIF  637 (2102)
T ss_pred             HhccchhHHHHHHHHhcCCChhHHHHHHHHHHHHHhhcchhHHHHHhhhccccHHHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence            7443211                                     011123689999999999999999999999999999


Q ss_pred             cCCcccHHHHHhCCChHHHHHHHhcCChhHHHHHHHHHHHHhhcCC--CCchhHHhcCcHHHHHHhhCCCCHHHHHHHHH
Q psy15604        648 YGNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCS--SNKPAIVEAGGMQALAMHLGHPSQRLVQNCLW  725 (986)
Q Consensus       648 ~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~L~~Ls~~~--~~~~~l~~~g~~~~L~~ll~~~~~~v~~~al~  725 (986)
                      .++++....++..|++++++.++++.+ .+++..++|+|.|++.+.  .++..+++.|++++|++++++.+..+...++.
T Consensus       638 a~~~d~~~avv~agaIpPLV~LLss~~-~~v~keAA~AL~nL~~~~~~~q~~~~v~~GaV~pL~~LL~~~d~~v~e~Al~  716 (2102)
T PLN03200        638 SSRQDLCESLATDEIINPCIKLLTNNT-EAVATQSARALAALSRSIKENRKVSYAAEDAIKPLIKLAKSSSIEVAEQAVC  716 (2102)
T ss_pred             cCChHHHHHHHHcCCHHHHHHHHhcCC-hHHHHHHHHHHHHHHhCCCHHHHHHHHHcCCHHHHHHHHhCCChHHHHHHHH
Confidence            998888888999999999999999888 556778999999998653  34467899999999999999999999999999


Q ss_pred             HHHHhhccccc--ccchhchHHHHHHHhccCChhhHHHHHHHHhhhccCcHHHHHHHHhcCCcccccccccccCCchhh-
Q psy15604        726 TLRNLSDAGTK--VDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQ-  802 (986)
Q Consensus       726 ~L~nLs~~~~~--~~~~~~~l~~L~~ll~~~~~~i~~~a~~~L~ni~~g~~~~v~~l~~~~~~~~~~e~~~~~~~~~~~-  802 (986)
                      +|.|+...+..  .....|.++.|+.++++.++..|+.|+|+|.+++.+.+                         .++ 
T Consensus       717 ALanLl~~~e~~~ei~~~~~I~~Lv~lLr~G~~~~k~~Aa~AL~~L~~~~~-------------------------~~~~  771 (2102)
T PLN03200        717 ALANLLSDPEVAAEALAEDIILPLTRVLREGTLEGKRNAARALAQLLKHFP-------------------------VDDV  771 (2102)
T ss_pred             HHHHHHcCchHHHHHHhcCcHHHHHHHHHhCChHHHHHHHHHHHHHHhCCC-------------------------hhHH
Confidence            99999966542  33456889999999999999999999999986544322                         222 


Q ss_pred             H-HHHHhcCCCCC----cccCCCCcccccccccchhhhhhhhcccCCCCcccchhhhccCchHHHHHHHHhcCCchhhHH
Q psy15604        803 Q-NYLVDSGIHSG----VNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITE  877 (986)
Q Consensus       803 ~-~~l~~~~~~~~----L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~l~~~~~~~v~e  877 (986)
                      + .|....|++.+    |...|.+.+.+.+.|+++..+.......+...++.....+.+++++.|.+.+  .+.+|.+++
T Consensus       772 ~~~~~~~~g~v~~l~~~L~~~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~e~p~~l~~l~~~l--~~~~p~~~~  849 (2102)
T PLN03200        772 LKDSVQCRGTVLALVDLLNSTDLDSSATSEALEALALLARTKGGANFSHPPWAVLAEVPSSLEPLVRCL--AEGHPLVQD  849 (2102)
T ss_pred             HHHHHHHhCcHHHHHHHHhcCCcchhhHHHHHHHHHHHHhhcccCCCCCCchhhHHhccCchHHHHHHH--HcCChHHHH
Confidence            2 56667777666    6777877777766678887666654444445577788899999999997444  899999999


Q ss_pred             HHHHHHHHhhcCCchHHHHHHHHHhhhChHHHHHhh
Q psy15604        878 PAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLL  913 (986)
Q Consensus       878 ~a~~~l~~l~~~~~~~~~~~~~v~~~~~l~~l~~ll  913 (986)
                      +|+.+|..+|.++|. ......+...+.+..+.+-.
T Consensus       850 kai~il~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  884 (2102)
T PLN03200        850 KAIEILSRLCRDQPV-VLGDLIANASKCISSLADRI  884 (2102)
T ss_pred             HHHHHHHHHhccChh-HHHHHHhcccchHHHHHHHH
Confidence            999999999998763 23344455555555555443

>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>KOG1048|consensus Back     alignment and domain information
>KOG4224|consensus Back     alignment and domain information
>KOG4224|consensus Back     alignment and domain information
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0166|consensus Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>KOG1048|consensus Back     alignment and domain information
>KOG4500|consensus Back     alignment and domain information
>KOG2122|consensus Back     alignment and domain information
>KOG2122|consensus Back     alignment and domain information
>KOG4500|consensus Back     alignment and domain information
>KOG1222|consensus Back     alignment and domain information
>KOG4199|consensus Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG4199|consensus Back     alignment and domain information
>KOG1293|consensus Back     alignment and domain information
>KOG1222|consensus Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG1293|consensus Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG2171|consensus Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>KOG2171|consensus Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG1241|consensus Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>KOG2023|consensus Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>KOG1824|consensus Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>KOG2023|consensus Back     alignment and domain information
>KOG1824|consensus Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0168|consensus Back     alignment and domain information
>KOG2759|consensus Back     alignment and domain information
>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments Back     alignment and domain information
>KOG0946|consensus Back     alignment and domain information
>KOG0168|consensus Back     alignment and domain information
>KOG1241|consensus Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG1062|consensus Back     alignment and domain information
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0213|consensus Back     alignment and domain information
>KOG2160|consensus Back     alignment and domain information
>KOG1789|consensus Back     alignment and domain information
>KOG2160|consensus Back     alignment and domain information
>KOG0213|consensus Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG0946|consensus Back     alignment and domain information
>PF05536 Neurochondrin: Neurochondrin Back     alignment and domain information
>KOG4413|consensus Back     alignment and domain information
>KOG3678|consensus Back     alignment and domain information
>KOG4646|consensus Back     alignment and domain information
>KOG1059|consensus Back     alignment and domain information
>KOG2759|consensus Back     alignment and domain information
>KOG2973|consensus Back     alignment and domain information
>KOG1789|consensus Back     alignment and domain information
>KOG0212|consensus Back     alignment and domain information
>KOG4646|consensus Back     alignment and domain information
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>KOG1060|consensus Back     alignment and domain information
>KOG3678|consensus Back     alignment and domain information
>KOG1062|consensus Back     alignment and domain information
>PF05536 Neurochondrin: Neurochondrin Back     alignment and domain information
>KOG1061|consensus Back     alignment and domain information
>KOG4413|consensus Back     alignment and domain information
>KOG1061|consensus Back     alignment and domain information
>KOG0915|consensus Back     alignment and domain information
>KOG1060|consensus Back     alignment and domain information
>TIGR02270 conserved hypothetical protein Back     alignment and domain information
>KOG0212|consensus Back     alignment and domain information
>TIGR02270 conserved hypothetical protein Back     alignment and domain information
>KOG1242|consensus Back     alignment and domain information
>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1077|consensus Back     alignment and domain information
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term Back     alignment and domain information
>KOG1077|consensus Back     alignment and domain information
>KOG1059|consensus Back     alignment and domain information
>PRK14707 hypothetical protein; Provisional Back     alignment and domain information
>KOG2973|consensus Back     alignment and domain information
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless Back     alignment and domain information
>KOG1242|consensus Back     alignment and domain information
>COG5369 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0211|consensus Back     alignment and domain information
>PRK14707 hypothetical protein; Provisional Back     alignment and domain information
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless Back     alignment and domain information
>KOG0211|consensus Back     alignment and domain information
>KOG1517|consensus Back     alignment and domain information
>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2734|consensus Back     alignment and domain information
>COG1413 FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>COG1413 FOG: HEAT repeat [Energy production and conversion] Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>PF14664 RICTOR_N: Rapamycin-insensitive companion of mTOR, N-term Back     alignment and domain information
>KOG2734|consensus Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>KOG1517|consensus Back     alignment and domain information
>COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] Back     alignment and domain information
>KOG0915|consensus Back     alignment and domain information
>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway [] Back     alignment and domain information
>KOG2259|consensus Back     alignment and domain information
>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10 Back     alignment and domain information
>KOG4535|consensus Back     alignment and domain information
>KOG1078|consensus Back     alignment and domain information
>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway [] Back     alignment and domain information
>smart00185 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>smart00185 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>KOG1058|consensus Back     alignment and domain information
>KOG4203|consensus Back     alignment and domain information
>KOG1240|consensus Back     alignment and domain information
>COG5369 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>KOG2259|consensus Back     alignment and domain information
>PF09759 Atx10homo_assoc: Spinocerebellar ataxia type 10 protein domain; InterPro: IPR019156 This is the conserved C-terminal 100 residues of Ataxin-10 Back     alignment and domain information
>PF11841 DUF3361: Domain of unknown function (DUF3361) Back     alignment and domain information
>COG5231 VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] Back     alignment and domain information
>KOG1240|consensus Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>KOG0567|consensus Back     alignment and domain information
>KOG0567|consensus Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>KOG1943|consensus Back     alignment and domain information
>KOG0414|consensus Back     alignment and domain information
>PF11841 DUF3361: Domain of unknown function (DUF3361) Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG4535|consensus Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1058|consensus Back     alignment and domain information
>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1 Back     alignment and domain information
>KOG4151|consensus Back     alignment and domain information
>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 Back     alignment and domain information
>PF11698 V-ATPase_H_C: V-ATPase subunit H; InterPro: IPR011987 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF06025 DUF913: Domain of Unknown Function (DUF913); InterPro: IPR010314 This is a domain of unknown function found towards the N terminus of a family of E3 ubiquitin protein ligases, including yeast TOM1, many of which appear to play a role in mRNA transcription and processing Back     alignment and domain information
>PF04063 DUF383: Domain of unknown function (DUF383); InterPro: IPR007205 This is a protein of unknown function Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms [] Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>PF04063 DUF383: Domain of unknown function (DUF383); InterPro: IPR007205 This is a protein of unknown function Back     alignment and domain information
>KOG3036|consensus Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>PF06025 DUF913: Domain of Unknown Function (DUF913); InterPro: IPR010314 This is a domain of unknown function found towards the N terminus of a family of E3 ubiquitin protein ligases, including yeast TOM1, many of which appear to play a role in mRNA transcription and processing Back     alignment and domain information
>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle Back     alignment and domain information
>KOG1832|consensus Back     alignment and domain information
>KOG1991|consensus Back     alignment and domain information
>KOG1078|consensus Back     alignment and domain information
>KOG1943|consensus Back     alignment and domain information
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] Back     alignment and domain information
>PF11701 UNC45-central: Myosin-binding striated muscle assembly central; InterPro: IPR024660 The UNC-45 or small muscle protein 1 of Caenorhabditis elegans is expressed in two forms from different genomic positions in mammals: as a general tissue protein (UNC-45a) and as a specific form (UNC-45b) expressed only in striated and skeletal muscle Back     alignment and domain information
>KOG2062|consensus Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>KOG1991|consensus Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>KOG2274|consensus Back     alignment and domain information
>KOG2062|consensus Back     alignment and domain information
>KOG4151|consensus Back     alignment and domain information
>KOG3036|consensus Back     alignment and domain information
>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1 Back     alignment and domain information
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] Back     alignment and domain information
>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 Back     alignment and domain information
>PF12031 DUF3518: Domain of unknown function (DUF3518); InterPro: IPR021906 This presumed domain is functionally uncharacterised Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis Back     alignment and domain information
>KOG1832|consensus Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis Back     alignment and domain information
>PF07814 WAPL: Wings apart-like protein regulation of heterochromatin; InterPro: IPR022771 This entry contains sequences expressed in eukaryotic organisms (metazoa, fungi, plants) bearing high similarity to the WAPL conserved region of D Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>KOG0414|consensus Back     alignment and domain information
>KOG2999|consensus Back     alignment and domain information
>KOG1248|consensus Back     alignment and domain information
>KOG2274|consensus Back     alignment and domain information
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms Back     alignment and domain information
>PF04078 Rcd1: Cell differentiation family, Rcd1-like ; InterPro: IPR007216 Rcd1 (Required cell differentiation 1) -like proteins are found among a wide range of organisms [] Back     alignment and domain information
>KOG2611|consensus Back     alignment and domain information
>PRK09169 hypothetical protein; Validated Back     alignment and domain information
>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF08167 RIX1: rRNA processing/ribosome biogenesis Back     alignment and domain information
>KOG2025|consensus Back     alignment and domain information
>KOG2611|consensus Back     alignment and domain information
>PF07814 WAPL: Wings apart-like protein regulation of heterochromatin; InterPro: IPR022771 This entry contains sequences expressed in eukaryotic organisms (metazoa, fungi, plants) bearing high similarity to the WAPL conserved region of D Back     alignment and domain information
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms Back     alignment and domain information
>PF14668 RICTOR_V: Rapamycin-insensitive companion of mTOR, domain 5 Back     alignment and domain information
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division [] Back     alignment and domain information
>KOG2999|consensus Back     alignment and domain information
>COG5116 RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1967|consensus Back     alignment and domain information
>KOG2025|consensus Back     alignment and domain information
>KOG2956|consensus Back     alignment and domain information
>PF14668 RICTOR_V: Rapamycin-insensitive companion of mTOR, domain 5 Back     alignment and domain information
>KOG2137|consensus Back     alignment and domain information
>KOG2956|consensus Back     alignment and domain information
>KOG1820|consensus Back     alignment and domain information
>KOG2032|consensus Back     alignment and domain information
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division [] Back     alignment and domain information
>KOG2032|consensus Back     alignment and domain information
>PF12530 DUF3730: Protein of unknown function (DUF3730) ; InterPro: IPR022542 This domain is found in eukaryotes, and is typically between 220 and 262 amino acids in length Back     alignment and domain information
>PRK09169 hypothetical protein; Validated Back     alignment and domain information
>PF12530 DUF3730: Protein of unknown function (DUF3730) ; InterPro: IPR022542 This domain is found in eukaryotes, and is typically between 220 and 262 amino acids in length Back     alignment and domain information
>KOG1967|consensus Back     alignment and domain information
>PF10363 DUF2435: Protein of unknown function (DUF2435) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query986
2z6g_A 780 Crystal Structure Of A Full-Length Zebrafish Beta-C 1e-160
2z6g_A 780 Crystal Structure Of A Full-Length Zebrafish Beta-C 1e-46
1g3j_A532 Crystal Structure Of The Xtcf3-CbdBETA-Catenin Arma 1e-143
1g3j_A532 Crystal Structure Of The Xtcf3-CbdBETA-Catenin Arma 1e-46
1qz7_A533 Beta-Catenin Binding Domain Of Axin In Complex With 1e-143
1qz7_A533 Beta-Catenin Binding Domain Of Axin In Complex With 1e-46
1jpw_A540 Crystal Structure Of A Human Tcf-4 BETA-Catenin Com 1e-143
1jpw_A540 Crystal Structure Of A Human Tcf-4 BETA-Catenin Com 8e-47
3ouw_A540 Structure Of Beta-Catenin With Lef-1 Length = 540 1e-143
3ouw_A540 Structure Of Beta-Catenin With Lef-1 Length = 540 8e-47
1i7x_A538 Beta-CateninE-Cadherin Complex Length = 538 1e-143
1i7x_A538 Beta-CateninE-Cadherin Complex Length = 538 8e-47
1jdh_A529 Crystal Structure Of Beta-Catenin And Htcf-4 Length 1e-142
1jdh_A529 Crystal Structure Of Beta-Catenin And Htcf-4 Length 1e-46
3tx7_A527 Crystal Structure Of Lrh-1BETA-Catenin Complex Leng 1e-140
3tx7_A527 Crystal Structure Of Lrh-1BETA-Catenin Complex Leng 9e-47
2z6h_A 644 Crystal Structure Of Beta-Catenin Armadillo Repeat 1e-140
2z6h_A 644 Crystal Structure Of Beta-Catenin Armadillo Repeat 9e-47
2gl7_A550 Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX 1e-139
2gl7_A 550 Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX 7e-47
1t08_A519 Crystal Structure Of Beta-CateninICAT HELICAL Domai 1e-135
1t08_A519 Crystal Structure Of Beta-CateninICAT HELICAL Domai 9e-47
4djs_A518 Structure Of Beta-Catenin In Complex With A Stapled 1e-134
4djs_A518 Structure Of Beta-Catenin In Complex With A Stapled 1e-46
1luj_A514 Crystal Structure Of The Beta-CateninICAT COMPLEX L 1e-133
1luj_A514 Crystal Structure Of The Beta-CateninICAT COMPLEX L 1e-46
2bct_A516 The Armadillo Repeat Region From Murine Beta-Cateni 1e-133
2bct_A516 The Armadillo Repeat Region From Murine Beta-Cateni 1e-46
3ifq_A553 Interction Of Plakoglobin And Beta-Catenin With Des 1e-126
3ifq_A 553 Interction Of Plakoglobin And Beta-Catenin With Des 4e-39
3bct_A470 The Armadillo Repeat Region From Murine Beta-Cateni 1e-106
3bct_A470 The Armadillo Repeat Region From Murine Beta-Cateni 1e-45
3sla_A168 X-Ray Structure Of First Four Repeats Of Human Beta 4e-77
3sl9_A167 X-Ray Structure Of Beta Catenin In Complex With Bcl 4e-76
4db8_A252 Designed Armadillo-Repeat Protein Length = 252 1e-13
4db8_A252 Designed Armadillo-Repeat Protein Length = 252 1e-13
4db6_A210 Designed Armadillo Repeat Protein (Yiiim3aii) Lengt 2e-10
4db6_A210 Designed Armadillo Repeat Protein (Yiiim3aii) Lengt 9e-09
4db6_A210 Designed Armadillo Repeat Protein (Yiiim3aii) Lengt 9e-09
4dba_A210 Designed Armadillo Repeat Protein (Yiim3aii) Length 5e-10
4dba_A210 Designed Armadillo Repeat Protein (Yiim3aii) Length 5e-09
4dba_A210 Designed Armadillo Repeat Protein (Yiim3aii) Length 5e-09
4hxt_A252 Crystal Structure Of Engineered Protein. Northeast 2e-09
4hxt_A252 Crystal Structure Of Engineered Protein. Northeast 2e-09
4db9_A210 Designed Armadillo Repeat Protein (Yiiim3aiii) Leng 1e-08
4db9_A210 Designed Armadillo Repeat Protein (Yiiim3aiii) Leng 1e-08
1dow_B32 Crystal Structure Of A Chimera Of Beta-Catenin And 2e-08
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin Length = 780 Back     alignment and structure 
Iteration: 1

 Score =  561 bits (1446), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/367 (75%), Positives = 308/367 (83%), Gaps = 13/367 (3%)
Query: 440 MFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELI 499
           MFPETL+EG++IPSTQFD+A PT VQRL EPSQMLKHAVVNLINYQDDA+LATRAIPEL 
Sbjct: 97  MFPETLDEGMQIPSTQFDSAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELT 156
Query: 500 KLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGT 559
           KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V  + N+ND+ET +   GT
Sbjct: 157 KLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGT 216
Query: 560 LHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAG 619
           LHNLSHHR+GLLAIFKSGGIPALV +L SPV+SVLF+AITTLHNLLLHQEG+KMAVRLAG
Sbjct: 217 LHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAG 276
Query: 620 GLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKLL 679
           GLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP  LV IMR+Y YEKLL
Sbjct: 277 GLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLL 336
Query: 680 WCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVDG 739
           W TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL  PSQRLVQNCLWTLRNLSDA TK +G
Sbjct: 337 WTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEG 396
Query: 740 XXXXXXXXXXXXXXXDINVITCAAGV-------------TVCQVGGVEALVQTIVNAGDR 786
                          DINV+TCAAG+              VCQVGG+EALV+T++ AGDR
Sbjct: 397 MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDR 456
Query: 787 EEITEPA 793
           E+ITEPA
Sbjct: 457 EDITEPA 463
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin Length = 780 Back     alignment and structure
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo Repeat Complex Length = 532 Back     alignment and structure
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo Repeat Complex Length = 532 Back     alignment and structure
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta- Catenin Length = 533 Back     alignment and structure
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta- Catenin Length = 533 Back     alignment and structure
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex Length = 540 Back     alignment and structure
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex Length = 540 Back     alignment and structure
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1 Length = 540 Back     alignment and structure
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1 Length = 540 Back     alignment and structure
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex Length = 538 Back     alignment and structure
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex Length = 538 Back     alignment and structure
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4 Length = 529 Back     alignment and structure
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4 Length = 529 Back     alignment and structure
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex Length = 527 Back     alignment and structure
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex Length = 527 Back     alignment and structure
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region And Its C-Terminal Domain Length = 644 Back     alignment and structure
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region And Its C-Terminal Domain Length = 644 Back     alignment and structure
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX Length = 550 Back     alignment and structure
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX Length = 550 Back     alignment and structure
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL DomainUNPHOSPHORYLATED APC R3 Length = 519 Back     alignment and structure
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL DomainUNPHOSPHORYLATED APC R3 Length = 519 Back     alignment and structure
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled Peptide Inhibitor Length = 518 Back     alignment and structure
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled Peptide Inhibitor Length = 518 Back     alignment and structure
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX Length = 514 Back     alignment and structure
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX Length = 514 Back     alignment and structure
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin Length = 516 Back     alignment and structure
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin Length = 516 Back     alignment and structure
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal Cadherins Length = 553 Back     alignment and structure
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal Cadherins Length = 553 Back     alignment and structure
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin Length = 470 Back     alignment and structure
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin Length = 470 Back     alignment and structure
>pdb|3SLA|A Chain A, X-Ray Structure Of First Four Repeats Of Human Beta-Catenin Length = 168 Back     alignment and structure
>pdb|3SL9|A Chain A, X-Ray Structure Of Beta Catenin In Complex With Bcl9 Length = 167 Back     alignment and structure
>pdb|4DB8|A Chain A, Designed Armadillo-Repeat Protein Length = 252 Back     alignment and structure
>pdb|4DB8|A Chain A, Designed Armadillo-Repeat Protein Length = 252 Back     alignment and structure
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii) Length = 210 Back     alignment and structure
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii) Length = 210 Back     alignment and structure
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii) Length = 210 Back     alignment and structure
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii) Length = 210 Back     alignment and structure
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii) Length = 210 Back     alignment and structure
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii) Length = 210 Back     alignment and structure
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or329 Length = 252 Back     alignment and structure
>pdb|4HXT|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or329 Length = 252 Back     alignment and structure
>pdb|4DB9|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aiii) Length = 210 Back     alignment and structure
>pdb|4DB9|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aiii) Length = 210 Back     alignment and structure
>pdb|1DOW|B Chain B, Crystal Structure Of A Chimera Of Beta-Catenin And Alpha- Catenin Length = 32 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query986
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 1e-111
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 3e-97
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 4e-49
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 2e-48
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 3e-27
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 1e-11
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 1e-05
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 5e-05
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 2e-98
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 2e-96
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 1e-48
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 6e-46
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 3e-32
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 3e-20
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 3e-12
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 5e-07
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 5e-06
1jdh_A 529 Beta-catenin; beta-catenin, protein-protein comple 3e-04
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 2e-97
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 1e-96
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 1e-46
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 1e-46
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 1e-20
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 3e-13
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 7e-06
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 6e-05
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 1e-52
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 2e-50
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 2e-31
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 5e-26
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 4e-22
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 1e-16
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 6e-15
2jdq_A 450 Importin alpha-1 subunit; transport, PB2 subunit, 2e-04
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 4e-49
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 3e-44
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 3e-31
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 6e-28
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 3e-27
3oqs_A510 Importin subunit alpha-2; importin alpha, karyophe 4e-11
3oqs_A 510 Importin subunit alpha-2; importin alpha, karyophe 3e-08
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 3e-48
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 2e-46
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 9e-22
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 1e-19
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 1e-13
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 1e-12
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 1e-04
3nmz_A458 APC variant protein; protein-protein complex, arma 4e-45
3nmz_A458 APC variant protein; protein-protein complex, arma 9e-40
3nmz_A458 APC variant protein; protein-protein complex, arma 4e-29
3nmz_A458 APC variant protein; protein-protein complex, arma 1e-24
3nmz_A458 APC variant protein; protein-protein complex, arma 2e-24
3nmz_A458 APC variant protein; protein-protein complex, arma 5e-23
3nmz_A458 APC variant protein; protein-protein complex, arma 2e-21
3nmz_A458 APC variant protein; protein-protein complex, arma 5e-17
3nmz_A458 APC variant protein; protein-protein complex, arma 1e-16
3nmz_A458 APC variant protein; protein-protein complex, arma 2e-07
3nmz_A458 APC variant protein; protein-protein complex, arma 2e-05
3nmz_A 458 APC variant protein; protein-protein complex, arma 5e-04
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 3e-44
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 3e-44
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 2e-16
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 2e-12
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 1e-09
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 9e-08
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 7e-07
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 6e-43
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 8e-40
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 4e-29
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 2e-23
1wa5_B 530 Importin alpha subunit; nuclear transport/complex, 8e-09
3l6x_A 584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 9e-42
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 7e-37
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 3e-24
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 1e-18
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 2e-18
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 2e-39
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 7e-34
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 1e-18
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 5e-16
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 8e-16
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 2e-13
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 5e-10
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 9e-32
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 2e-28
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 7e-28
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 6e-25
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 2e-21
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 2e-20
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 2e-14
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 1e-13
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 6e-08
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 5e-06
3nmw_A 354 APC variant protein; ARMADIILO repeats domain, cel 3e-04
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 1e-25
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 4e-25
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 2e-16
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 2e-11
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 2e-08
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 3e-08
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 4e-08
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 1e-07
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 2e-04
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 2e-04
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 5e-24
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 6e-23
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 1e-20
3now_A 810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 6e-10
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 7e-19
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 2e-17
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 7e-16
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 3e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
1dow_B32 Beta-catenin; four-helix bundle, cell adhesion; 1. 2e-11
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 8e-10
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 4e-09
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 1e-06
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 1e-09
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 8e-09
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 1e-04
1te4_A131 Conserved protein MTH187; methanobacterium thermoa 4e-08
1te4_A131 Conserved protein MTH187; methanobacterium thermoa 9e-07
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 5e-08
1u6g_C1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 2e-05
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 1e-07
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 2e-05
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 3e-06
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 4e-06
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 9e-05
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 8e-04
2db0_A253 253AA long hypothetical protein; heat repeats, hel 1e-05
2db0_A253 253AA long hypothetical protein; heat repeats, hel 4e-04
2db0_A253 253AA long hypothetical protein; heat repeats, hel 6e-04
1oyz_A280 Hypothetical protein YIBA; structural genomics, PS 2e-05
1oyz_A280 Hypothetical protein YIBA; structural genomics, PS 2e-04
3grl_A651 General vesicular transport factor P115; vesicle t 4e-05
3grl_A651 General vesicular transport factor P115; vesicle t 1e-04
3grl_A 651 General vesicular transport factor P115; vesicle t 3e-04
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 4e-05
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 6e-04
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 3e-04
1p22_C26 Beta-catenin, Pro2286; ubiquitination, degradation 7e-04
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
 Score =  360 bits (925), Expect = e-111
 Identities = 321/571 (56%), Positives = 373/571 (65%), Gaps = 55/571 (9%)

Query: 439 LMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPEL 498
            MFPETL+EG++IPSTQFD+A PT VQRL EPSQMLKHAVVNLINYQDDA+LATRAIPEL
Sbjct: 96  AMFPETLDEGMQIPSTQFDSAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPEL 155

Query: 499 IKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVG 558
            KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V  + N+ND+ET +   G
Sbjct: 156 TKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSG 215

Query: 559 TLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLA 618
           TLHNLSHHR+GLLAIFKSGGIPALV +L SPV+SVLF+AITTLHNLLLHQEG+KMAVRLA
Sbjct: 216 TLHNLSHHREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLA 275

Query: 619 GGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPVELVRIMRSYDYEKL 678
           GGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP  LV IMR+Y YEKL
Sbjct: 276 GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKL 335

Query: 679 LWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKVD 738
           LW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL  PSQRLVQNCLWTLRNLSDA TK +
Sbjct: 336 LWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQE 395

Query: 739 GLESLLQSLVQLLASQDINVITCAAGV-------------TVCQVGGVEALVQTIVNAGD 785
           G+E LL +LVQLL S DINV+TCAAG+              VCQVGG+EALV+T++ AGD
Sbjct: 396 GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGD 455

Query: 786 REEITEPA---------DHSVNMWQQQNYLVDSGIHSGVN-TNAPSLTGKEEDMDGDQLM 835
           RE+ITEPA          H      Q    +  G+   V   + PS     +   G  L+
Sbjct: 456 REDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVG--LI 513

Query: 836 FEMDQGFGQGFTQDQVTVCQVGGVEALVQ--------------------TIVNAGDREEI 875
             +          +   + + G +  LVQ                      V     EEI
Sbjct: 514 RNLALC-----PANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEI 568

Query: 876 TEPAVCALRHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPPSRWPLVKAVIGLIRNLALC 935
            E    AL  L          +  +R    I   V LL  P    + +   G++  LA  
Sbjct: 569 VEACTGALHILAR----DIHNRIVIRGLNTIPLFVQLLYSPI-ENIQRVAAGVLCELAQD 623

Query: 936 QANHAPLREYGAIHLLVILLNRAFTDTQRVS 966
           +     +   GA   L  LL+         +
Sbjct: 624 KEAAEAIEAEGATAPLTELLHSRNEGVATYA 654
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Length = 644 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Length = 450 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha, nuclear localisation SIGN recognition, chloride intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus} PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A 1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ... Length = 510 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Length = 252 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Length = 458 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Length = 210 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Length = 530 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584 Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Length = 584 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Length = 457 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Length = 354 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Length = 233 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Length = 810 Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296 Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296 Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296 Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Length = 296 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1dow_B Beta-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} Length = 32 Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Length = 211 Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Length = 201 Back     alignment and structure
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Length = 131 Back     alignment and structure
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Length = 131 Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Length = 1230 Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Length = 591 Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Length = 591 Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 Back     alignment and structure
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 Back     alignment and structure
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Length = 253 Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Length = 280 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Length = 651 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Length = 651 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Length = 651 Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778 Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Length = 778 Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Length = 618 Back     alignment and structure
>1p22_C Beta-catenin, Pro2286; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} PDB: 2g57_A* Length = 26 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query986
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 100.0
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 100.0
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 100.0
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 100.0
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 100.0
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 100.0
2z6h_A644 Catenin beta-1, beta-catenin; C-terminal domain, a 100.0
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 100.0
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 100.0
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 100.0
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 100.0
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 100.0
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 100.0
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 100.0
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 99.98
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 99.97
3nmz_A458 APC variant protein; protein-protein complex, arma 99.97
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 99.97
3nmz_A458 APC variant protein; protein-protein complex, arma 99.97
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 99.97
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 99.97
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 99.97
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 99.97
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 99.96
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 99.95
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 99.94
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 99.92
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 99.91
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 99.89
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 99.88
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 99.87
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 99.87
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 99.85
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 99.84
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 99.83
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 99.83
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 99.83
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 99.81
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 99.81
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 99.8
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 99.8
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 99.78
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 99.72
1qgr_A876 Protein (importin beta subunit); transport recepto 99.71
1qgr_A876 Protein (importin beta subunit); transport recepto 99.7
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 99.69
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 99.66
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 99.66
3grl_A651 General vesicular transport factor P115; vesicle t 99.65
2vgl_B591 AP-2 complex subunit beta-1; cytoplasmic vesicle, 99.65
3grl_A651 General vesicular transport factor P115; vesicle t 99.64
1u6g_C 1230 TIP120 protein, CAND1; cullin repeat, heat repeat, 99.6
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 99.55
1w63_A618 Adapter-related protein complex 1 gamma 1 subunit; 99.49
1oyz_A280 Hypothetical protein YIBA; structural genomics, PS 99.34
1oyz_A280 Hypothetical protein YIBA; structural genomics, PS 99.31
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 99.28
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 99.23
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 99.18
2vgl_A621 Adaptor protein complex AP-2, alpha 2 subunit; cyt 99.15
3ltm_A211 Alpha-REP4; protein engineering, heat-like repeat, 99.14
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 99.13
3ltj_A201 Alpharep-4; protein engineering, heat-like repeat, 99.09
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 99.0
4gmo_A684 Putative uncharacterized protein; ARM, heat, solen 98.92
4ady_A963 RPN2, 26S proteasome regulatory subunit RPN2; prot 98.73
4gmo_A 684 Putative uncharacterized protein; ARM, heat, solen 98.51
3b2a_A265 TON_1937, putative uncharacterized protein; heat-r 98.41
1ho8_A480 Vacuolar ATP synthase subunit H; heat repeat, hydr 98.38
4ady_A963 RPN2, 26S proteasome regulatory subunit RPN2; prot 98.21
1wa5_C960 Importin alpha RE-exporter; nuclear transport/comp 98.16
3b2a_A265 TON_1937, putative uncharacterized protein; heat-r 98.14
1wa5_C960 Importin alpha RE-exporter; nuclear transport/comp 98.05
1ho8_A480 Vacuolar ATP synthase subunit H; heat repeat, hydr 98.04
3tjz_B355 Coatomer subunit gamma; protein trafficking, golgi 98.01
2x19_B963 Importin-13; nuclear transport, protein transport; 97.95
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 97.93
2x1g_F971 Cadmus; transport protein, developmental protein, 97.9
2qk2_A242 LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2 97.9
1te4_A131 Conserved protein MTH187; methanobacterium thermoa 97.9
1te4_A131 Conserved protein MTH187; methanobacterium thermoa 97.86
3tjz_B355 Coatomer subunit gamma; protein trafficking, golgi 97.8
2qk1_A249 Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h 97.52
2x1g_F 971 Cadmus; transport protein, developmental protein, 97.51
4hat_C 1023 Exportin-1; heat repeat, nuclear export, RAN-ranbp 97.5
2qk1_A249 Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, h 97.48
2db0_A253 253AA long hypothetical protein; heat repeats, hel 97.45
3ibv_A980 Exportin-T; karyopherin, heat repeat, cytoplasm, n 97.4
2db0_A253 253AA long hypothetical protein; heat repeats, hel 97.39
3dad_A339 FH1/FH2 domain-containing protein 1; formin, FHOD1 97.37
3m1i_C 1049 Exportin-1; heat repeat, GTP-binding, nucleotide-b 97.3
3dad_A339 FH1/FH2 domain-containing protein 1; formin, FHOD1 97.2
2x19_B 963 Importin-13; nuclear transport, protein transport; 96.96
2iw3_A 986 Elongation factor 3A; acetylation, ATP-binding, pr 96.7
3gjx_A 1073 Exportin-1; transport, cytoplasm, nucleus, RNA-bin 96.36
3oc3_A 800 Helicase MOT1, MOT1; regulation of transcription, 96.32
2iw3_A 986 Elongation factor 3A; acetylation, ATP-binding, pr 96.28
3m1i_C 1049 Exportin-1; heat repeat, GTP-binding, nucleotide-b 96.08
1dow_B32 Beta-catenin; four-helix bundle, cell adhesion; 1. 95.82
3ibv_A 980 Exportin-T; karyopherin, heat repeat, cytoplasm, n 95.51
3ebb_A304 Phospholipase A2-activating protein; armadillo rep 94.78
2fv2_A268 RCD1 required for cell differentiation1 homolog; a 94.38
3oc3_A800 Helicase MOT1, MOT1; regulation of transcription, 94.36
4hat_C1023 Exportin-1; heat repeat, nuclear export, RAN-ranbp 93.58
4ffb_C278 Protein STU2; tubulin fold, heat repeats, cytoskel 93.45
3ebb_A304 Phospholipase A2-activating protein; armadillo rep 93.44
4ffb_C278 Protein STU2; tubulin fold, heat repeats, cytoskel 93.17
2of3_A266 ZYG-9; multifunctional macromolecule, kinetochore, 92.78
1lrv_A244 LRV, leucine-rich repeat variant; leucine-rich rep 92.05
2of3_A266 ZYG-9; multifunctional macromolecule, kinetochore, 91.7
3l9t_A240 Putative uncharacterized protein SMU.31; hypotheti 90.21
2fv2_A268 RCD1 required for cell differentiation1 homolog; a 89.95
1lrv_A244 LRV, leucine-rich repeat variant; leucine-rich rep 89.72
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 88.87
1upk_A341 MO25 protein; transferase, armadillo; HET: MSE; 1. 88.57
3c2g_A619 SYS-1 protein; beta-catenin, phylogeny, SYS-1, dev 85.88
3u0r_A507 Apoptosis inhibitor 5; heat repeat, armadillo repe 85.17
3u0r_A507 Apoptosis inhibitor 5; heat repeat, armadillo repe 84.41
2f31_A233 Diaphanous protein homolog 1; formin,MDIA1, protei 83.32
3l9t_A240 Putative uncharacterized protein SMU.31; hypotheti 82.98
3eg5_B383 Protein diaphanous homolog 1; protein-protein comp 82.87
2f31_A233 Diaphanous protein homolog 1; formin,MDIA1, protei 81.93
1lsh_A 1056 Lipovitellin (LV-1N, LV-1C); vitellogenin, lipopro 81.62
3eg5_B383 Protein diaphanous homolog 1; protein-protein comp 80.39
3c2g_A619 SYS-1 protein; beta-catenin, phylogeny, SYS-1, dev 80.31
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
Probab=100.00  E-value=1.2e-43  Score=416.42  Aligned_cols=674  Identities=13%  Similarity=0.095  Sum_probs=513.1

Q ss_pred             cCCChhHHhhHHHHHHHhhcChhhHHHHHhcCCcHHHHHHHHh-h-----------hc---CCC-ccccccccccccccc
Q psy15604         13 NSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSK-T-----------LV---TAS-SNNTLILQDDADLAT   76 (986)
Q Consensus        13 ~~~d~~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Ll~ll~~-~-----------l~---~~~-~~~~~~~~~~~~~~~   76 (986)
                      .+.+.+.|++|...|..|++++.+.+.|+++|++..+.+++++ .           +.   +.. .....++.+      
T Consensus        18 ~~~~~~~~~~a~~nl~vl~re~aga~~i~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~r~~~~~~~------   91 (810)
T 3now_A           18 LATPIDKRRAAANNLVVLAKEQTGAELLYKDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTKGVLTE------   91 (810)
T ss_dssp             SCCSSHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHH------
T ss_pred             cccCHHHHHHHHhhceeeeccccchHHHHhCchHHHHHHHHhccCchhHHHHHHHHHHHHHhccHHHHHHHHHH------
Confidence            6778899999999999999999999999999999999999985 1           11   121 112234444      


Q ss_pred             CcHHHHHHHhcCCChhhHHHHHhHHHHHHHhcCCCcch------hHHHhC------CCHHHHHHHHccC--CHHHHHHHH
Q psy15604         77 RAIPELIKLLNDEDQDDADLATRAIPELIKLLNDEDQD------DADLAT------RAIPELIKLLNDE--DQVVVSQAA  142 (986)
Q Consensus        77 g~i~~l~~ll~~~~~~~~~~a~~aL~~l~~~~~~~~~~------~~i~~~------g~i~~L~~ll~~~--~~~~~~~a~  142 (986)
                      =+++++++++.+++.+....+...+..+.+.++..+..      ..++..      ..+..|+.++.+.  +...|..+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~r~~~~  171 (810)
T 3now_A           92 LGVPWFMRVLDQKHENCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVI  171 (810)
T ss_dssp             SCHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHTCCSSTTCCCCHHHHHHTHHHHHHHHHHHHHHHTCTTSCHHHHHHHH
T ss_pred             cCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccccccccCCcHHHHhhhhhHHHHHHHHHHHHhhccccChhhHHHHH
Confidence            58999999999998888888888888887755533222      223221      1234466666655  467889998


Q ss_pred             HHHHHhcccC--cchhHhhhCCchHHHHHHHHhcCC----------CHHHHHHHHHHHHhhccCc--cchHHHHhcCChH
Q psy15604        143 MMVHQLSKKE--ASRHAIMNSPQMVAALVHAISNSN----------DLETTKGAVGTLHNLSHHR--QGLLAIFKSGGIP  208 (986)
Q Consensus       143 ~~L~~la~~~--~~~~~i~~~~~~i~~Lv~lL~~~~----------~~~~~~~a~~~L~~ls~~~--~~~~~i~~~g~i~  208 (986)
                      .+|.+-....  .....+...+| +..+++.-...+          ..+.|..|.-+|.++-.+-  +..+..+..-+-.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~g-~~~~l~v~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  250 (810)
T 3now_A          172 ELITRNVHYTALEWAERLVEIRG-LCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDE  250 (810)
T ss_dssp             HHHHHHTTCTTTTHHHHHHHTTH-HHHHHHHHTCCSSSCCSSCCCCCTTHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred             HHHHHhCCccccccccchhhHhh-HHHHHHHHhcCccccccccCCCChhHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence            8887766433  22333555566 488888665421          3468999999999986652  2222333333334


Q ss_pred             HHHHhhCCCCHhHHHHHHHHHHHHhcCCCCchHHHH-HcCcHHHHHHHhccCCHHHHHHHHHHHHHHhccChhhHHHHHh
Q psy15604        209 ALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVR-LAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILA  287 (986)
Q Consensus       209 ~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~i~-~~g~i~~L~~ll~~~~~~~~~~a~~aL~~La~~~~~~~~~~~~  287 (986)
                      .+...+..++.+-...|+.++.++..+.++....+. ..|+++.|+.++.++++.++..|++++.+.+. +++.|..+.+
T Consensus       251 ~~~~~~~~~~~~~~~~a~~alt~i~~g~~~~~~~~~~~~G~v~~li~Ll~s~~~~~q~~A~~al~~aa~-~~~~R~~I~~  329 (810)
T 3now_A          251 YIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASS-KKDKAKALCE  329 (810)
T ss_dssp             HHHHHHSSCCHHHHHHHHHHHHHHHSSSHHHHHHHHHTTTHHHHHHHHHHSSCHHHHHHHHHHHHHHTT-SHHHHHTTHH
T ss_pred             HHHHHhccCChHhHHHHHHHHHHHhcCCHHHHHHHHhccchHHHHHHHhCCCCHHHHHHHHHHHHHHcC-CcHHHHHHHH
Confidence            555666778888889999999999988877776665 78999999999999999999999999999776 5889998888


Q ss_pred             CCCHHHHHHHHhcCChHHHHHHHHHHHHHhhhCCC-C-hHHHHHhccHHHHHHHhCCCCHHHHHHHHHHHhccccccccc
Q psy15604        288 SQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSS-N-KPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLSDAGTKV  365 (986)
Q Consensus       288 ~g~v~~L~~ll~~~~~~~~~~~a~~aL~~Ls~~~~-~-~~~i~~~g~l~~L~~ll~~~~~~~~~~~~~~L~~ls~~~~~i  365 (986)
                      .|+ +.|+.++++.+.. ++..++.+|+.++.... + .....+.|.+                                
T Consensus       330 ~gv-~~L~~Ll~s~~~~-vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i--------------------------------  375 (810)
T 3now_A          330 QGV-DILKRLYHSKNDG-IRVRALVGLCKLGSYGGQDAAIRPFGDGAA--------------------------------  375 (810)
T ss_dssp             HHH-HHHHHHTTCSCHH-HHHHHHHHHHHHHTTTTTTTSCCSSTTTHH--------------------------------
T ss_pred             cCc-HHHHHHHcCCCHH-HHHHHHHHHHHhccccccCccccchhhccH--------------------------------
Confidence            775 9999999866533 55544444444332110 0 0000000000                                


Q ss_pred             ccccCCchHHHHHHHHHHHHHhhChhhHHHHHhcCCcHHHHHHhccCchhHHHHHHHHHHHHhhccccccccccccccch
Q psy15604        366 SLLFNEIENIQRVAAGLLCELAQDKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETL  445 (986)
Q Consensus       366 ~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~l~~~g~l~~Lv~ll~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~  445 (986)
                                                                                                      
T Consensus       376 --------------------------------------------------------------------------------  375 (810)
T 3now_A          376 --------------------------------------------------------------------------------  375 (810)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhccCCCCCCCCCchhHHHHhcCCCcHHHHHHHHHHhcCCchhhhhcCCHHHHHHHhcCC--CHHHHHHHHHHHHHhhhc
Q psy15604        446 EEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDE--DQVVVSQAAMMVHQLSKK  523 (986)
Q Consensus       446 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~a~~~l~~~~~~~~~~~~~i~~L~~ll~~~--~~~~~~~a~~~L~~l~~~  523 (986)
                                                                    ...++.++++|.++  |++++..|+++|.+++..
T Consensus       376 ----------------------------------------------~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~  409 (810)
T 3now_A          376 ----------------------------------------------LKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLD  409 (810)
T ss_dssp             ----------------------------------------------HHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTS
T ss_pred             ----------------------------------------------HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCC
Confidence                                                          11155666777776  788899999999999999


Q ss_pred             cccchhhhcccCcHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCcc-c--------------------------------h
Q psy15604        524 EASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQ-G--------------------------------L  570 (986)
Q Consensus       524 ~~~~~~l~~~~~~i~~L~~lL~~~~~~~~~~~a~~~L~~ls~~~~-~--------------------------------~  570 (986)
                      +..+..++...|++|.|+.+|++. ++.+++.++|+|.|++...+ .                                .
T Consensus       410 ~~vk~~lv~d~g~Ip~LV~LL~s~-d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~~~ld~~~~v~~r~  488 (810)
T 3now_A          410 AECKEKLIEDKASIHALMDLARGG-NQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRI  488 (810)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHTT-CGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCSSCHHHHHHHHHHH
T ss_pred             cHHHHHHHHccchHHHHHHHhCCC-ChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccccccccHHHHHHHH
Confidence            988888887679999999999864 78999999999999998431 1                                1


Q ss_pred             hhhhccCChHHHHHhcCCCCHhHHHHHHHHHHHhhcCCCCChHHHHHhCcHHHHHHhhcCCCHhHHHHHHHHHHHHhcCC
Q psy15604        571 LAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGN  650 (986)
Q Consensus       571 ~~i~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~v~~~g~v~~Lv~ll~~~~~~v~~~a~~aL~~L~~~~  650 (986)
                      ..+++.|++|.|+.+|++++++++++|+|+|+|++.+ +++|..+.+.|++++|+.++.++++..+..|+|+|.||+.+.
T Consensus       489 ~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d-~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~  567 (810)
T 3now_A          489 TVLANEGITTALCALAKTESHNSQELIARVLNAVCGL-KELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITI  567 (810)
T ss_dssp             HHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCC
Confidence            5788999999999999999999999999999999965 448999999999999999999999999999999999999752


Q ss_pred             cccHHHH---HhCCChHHHHHHHhcCChhHHHHHHHHHHHHhhcCC-CCchhHHhcCcHHHHHHhhCCCCHHHHHHHHHH
Q psy15604        651 QESKLII---LASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCS-SNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWT  726 (986)
Q Consensus       651 ~~~~~~~---~~~~~~~~L~~ll~~~~~~~~~~~~~~~L~~Ls~~~-~~~~~l~~~g~~~~L~~ll~~~~~~v~~~al~~  726 (986)
                      .+ ...+   ...+++++|+++|.+.........++|+|.||+.++ .++..+++.|+++.|+.++.++++.++.+|+++
T Consensus       568 ~p-~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~  646 (810)
T 3now_A          568 NP-EVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQC  646 (810)
T ss_dssp             CH-HHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHH
T ss_pred             Ch-hhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHH
Confidence            21 1111   112589999999986543444567899999999885 567889999999999999999999999999999


Q ss_pred             HHHhhcccc---cccchhchHHHHHHHhccCChhhHHHHHHHHhhhccCcHHHHHHHHhcCCcccccccccccCCchhhH
Q psy15604        727 LRNLSDAGT---KVDGLESLLQSLVQLLASQDINVITCAAGVTVCQVGGVEALVQTIVNAGDREEITEPADHSVNMWQQQ  803 (986)
Q Consensus       727 L~nLs~~~~---~~~~~~~~l~~L~~ll~~~~~~i~~~a~~~L~ni~~g~~~~v~~l~~~~~~~~~~e~~~~~~~~~~~~  803 (986)
                      |+||+....   +.....|.++.|+.++++++..++++|||+|+|+++|++.+++.+++                     
T Consensus       647 L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~---------------------  705 (810)
T 3now_A          647 LCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILA---------------------  705 (810)
T ss_dssp             HHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHT---------------------
T ss_pred             HHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHH---------------------
Confidence            999994333   33333689999999999999999999999999999988877765543                     


Q ss_pred             HHHHhcCCCCCcccCCCCcccccccccchhhhhhhhcccCCCCcccchhhhccCchHHHHHHHHhcCCchhhHHHHHHHH
Q psy15604        804 NYLVDSGIHSGVNTNAPSLTGKEEDMDGDQLMFEMDQGFGQGFTQDQVTVCQVGGVEALVQTIVNAGDREEITEPAVCAL  883 (986)
Q Consensus       804 ~~l~~~~~~~~L~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~~l~~~~~~~v~e~a~~~l  883 (986)
                                                                         ..|+++.|.  -+..+.++++++.|+.++
T Consensus       706 ---------------------------------------------------~~g~I~~Lv--~LL~s~d~~vq~~A~~aL  732 (810)
T 3now_A          706 ---------------------------------------------------IASWLDILH--TLIANPSPAVQHRGIVII  732 (810)
T ss_dssp             ---------------------------------------------------STTHHHHHH--HHHTCSSHHHHHHHHHHH
T ss_pred             ---------------------------------------------------HcCCHHHHH--HHHCCCCHHHHHHHHHHH
Confidence                                                               147888888  556789999999999999


Q ss_pred             HHhhcCCchHHHHHHHHHhhhChHHHHHhhCCC--CCchHHHHHHHHHHhhhh
Q psy15604        884 RHLTSRHVESEMAQNAVRLNYGIQTIVNLLNPP--SRWPLVKAVIGLIRNLAL  934 (986)
Q Consensus       884 ~~l~~~~~~~~~~~~~v~~~~~l~~l~~ll~~~--~~~~~~~~~~~~l~nl~~  934 (986)
                      .|++.+++  +. ...+.+.+|+++|.++|+.+  .+..++..+..+|.|+-.
T Consensus       733 ~NL~~~s~--e~-~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~  782 (810)
T 3now_A          733 LNMINAGE--EI-AKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAER  782 (810)
T ss_dssp             HHHHTTCH--HH-HHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCH--HH-HHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHh
Confidence            99998652  33 45666789999999999754  356699999999999843
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1 Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Back     alignment and structure
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16 Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Back     alignment and structure
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A Back     alignment and structure
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic} Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} Back     alignment and structure
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9 Back     alignment and structure
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N Back     alignment and structure
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Back     alignment and structure
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus} Back     alignment and structure
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Back     alignment and structure
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9 Back     alignment and structure
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} Back     alignment and structure
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Back     alignment and structure
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster} Back     alignment and structure
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Back     alignment and structure
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16 Back     alignment and structure
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} Back     alignment and structure
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Back     alignment and structure
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B Back     alignment and structure
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Back     alignment and structure
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Back     alignment and structure
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Back     alignment and structure
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Back     alignment and structure
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Back     alignment and structure
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Back     alignment and structure
>1dow_B Beta-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} Back     alignment and structure
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Back     alignment and structure
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens} Back     alignment and structure
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens} Back     alignment and structure
>3oc3_A Helicase MOT1, MOT1; regulation of transcription, hydrolase-transc complex; HET: MES; 3.10A {Encephalitozoon cuniculi} Back     alignment and structure
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B Back     alignment and structure
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} Back     alignment and structure
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens} Back     alignment and structure
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae} Back     alignment and structure
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} Back     alignment and structure
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 Back     alignment and structure
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans} Back     alignment and structure
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} Back     alignment and structure
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens} Back     alignment and structure
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5 Back     alignment and structure
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Back     alignment and structure
>1upk_A MO25 protein; transferase, armadillo; HET: MSE; 1.85A {Homo sapiens} SCOP: a.118.1.15 PDB: 1upl_A 2wtk_A* 3gni_A* Back     alignment and structure
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A* Back     alignment and structure
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A Back     alignment and structure
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A Back     alignment and structure
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} Back     alignment and structure
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans} Back     alignment and structure
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B* Back     alignment and structure
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} Back     alignment and structure
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1 Back     alignment and structure
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B* Back     alignment and structure
>3c2g_A SYS-1 protein; beta-catenin, phylogeny, SYS-1, developmental protein, DNA-binding, nucleus; 2.50A {Caenorhabditis elegans} PDB: 3c2h_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 986
d1jdha_529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 9e-58
d1jdha_529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 2e-57
d1jdha_529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 5e-19
d1jdha_529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 7e-16
d1jdha_529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 7e-13
d1jdha_ 529 a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) 0.002
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 1e-25
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 2e-22
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 7e-20
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 3e-15
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 3e-14
d1xm9a1457 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo 3e-09
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 3e-15
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 5e-15
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 3e-12
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 7e-12
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 2e-11
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 1e-09
d1q1sc_434 a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus 2e-07
d1wa5b_503 a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S 7e-15
d1wa5b_503 a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S 2e-14
d1wa5b_503 a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S 1e-11
d1wa5b_503 a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S 1e-09
d1wa5b_503 a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (S 2e-07
d1u6gc_ 1207 a.118.1.2 (C:) Cullin-associated NEDD8-dissociated 2e-11
d1u6gc_ 1207 a.118.1.2 (C:) Cullin-associated NEDD8-dissociated 4e-07
d1u6gc_1207 a.118.1.2 (C:) Cullin-associated NEDD8-dissociated 0.002
d2vglb_579 a.118.1.10 (B:) Adaptin beta subunit N-terminal fr 2e-09
d2vglb_579 a.118.1.10 (B:) Adaptin beta subunit N-terminal fr 2e-08
d1xqra1264 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (Hsp 5e-09
d1xqra1264 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (Hsp 4e-07
d1xqra1264 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (Hsp 2e-06
d2vgla_584 a.118.1.10 (A:) Adaptin alpha C subunit N-terminal 4e-08
d2vgla_584 a.118.1.10 (A:) Adaptin alpha C subunit N-terminal 6e-08
d2vgla_584 a.118.1.10 (A:) Adaptin alpha C subunit N-terminal 1e-04
d1b3ua_588 a.118.1.2 (A:) Constant regulatory domain of prote 8e-06
d1oyza_276 a.118.1.16 (A:) Hypothetical protein YibA {Escheri 3e-05
d1lrva_233 a.118.1.5 (A:) Leucine-rich repeat variant {Azotob 0.001
d1lrva_233 a.118.1.5 (A:) Leucine-rich repeat variant {Azotob 0.002
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: beta-Catenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (522), Expect = 9e-58
 Identities = 258/547 (47%), Positives = 311/547 (56%), Gaps = 38/547 (6%)

Query: 113 QDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAI 172
           QDDA+LATRAIPEL KLLNDEDQVVV++AA+MVHQLSKKEASRHAIM SPQMV+A+V  +
Sbjct: 9   QDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTM 68

Query: 173 SNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNL 232
            N+ND+ET +   GTLHNLSHHR+GLLAIFKSGGIPALVK+L SPV+SVLFYAITTLHNL
Sbjct: 69  QNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNL 128

Query: 233 LLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPV 292
           LLHQEG+KMAVRLAGGLQKMV LL + NVKFLAI TDCLQILAYGNQESKLIILAS GP 
Sbjct: 129 LLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQ 188

Query: 293 ELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCL 352
            LV IMR+Y YEKLLW TSRVLKVLSVCSSNKPAIVEAGGMQAL +HL  PSQRLVQNCL
Sbjct: 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCL 248

Query: 353 WTLRNLSDAGTK-----------VSLLFNEIENIQRVAAGLLCE-LAQDKEGAETIEAEG 400
           WTLRNLSDA TK           V LL ++  N+   AAG+L      + +    +   G
Sbjct: 249 WTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG 308

Query: 401 ATAPLTDLLHSRNEGVEILIQGVHKIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQ 460
               L   +    +  +I    +  +  +   +           L  G+ +         
Sbjct: 309 GIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPS 368

Query: 461 PTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLNDEDQVVVSQAAMMVHQL 520
              + + T            L            AIP L++LL    Q    + +      
Sbjct: 369 HWPLIKATVGLIRNL----ALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTS------ 418

Query: 521 SKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIP 580
                          M       +      E  +G  G LH L+      + I     IP
Sbjct: 419 ---------------MGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIP 463

Query: 581 ALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVT 640
             V+LL SP+E++   A   L  L   +E ++      G    +  LL   N        
Sbjct: 464 LFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA-EGATAPLTELLHSRNEGVATYAA 522

Query: 641 DCLQILA 647
             L  ++
Sbjct: 523 AVLFRMS 529
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Length = 529 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 457 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 434 Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503 Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503 Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503 Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503 Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 503 Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 264 Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 264 Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 264 Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 Back     information, alignment and structure
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} Length = 276 Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Length = 233 Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Length = 233 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query986
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 99.97
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 99.96
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 99.96
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 99.93
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 99.88
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.76
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.75
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 99.68
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 99.65
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 99.51
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 99.49
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 99.49
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 99.43
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 99.13
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 99.12
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 99.11
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 99.07
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.89
d1oyza_276 Hypothetical protein YibA {Escherichia coli [TaxId 98.78
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 98.76
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.71
d1oyza_276 Hypothetical protein YibA {Escherichia coli [TaxId 98.66
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 98.54
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.52
d1ho8a_477 Regulatory subunit H of the V-type ATPase {Baker's 98.44
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 98.3
d1ho8a_477 Regulatory subunit H of the V-type ATPase {Baker's 97.96
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 97.57
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 97.38
d1wa5c_959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 95.75
d1lsha1336 Lipovitellin-phosvitin complex, superhelical domai 95.54
d1lrva_233 Leucine-rich repeat variant {Azotobacter vinelandi 93.1
d1lrva_233 Leucine-rich repeat variant {Azotobacter vinelandi 92.94
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 92.66
d1wa5c_ 959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 91.8
d1upka_330 Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} 91.67
d1lsha1336 Lipovitellin-phosvitin complex, superhelical domai 88.94
d2bnxa1343 Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) { 85.45
d2bnxa1343 Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) { 84.1
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: beta-Catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=372.22  Aligned_cols=501  Identities=50%  Similarity=0.688  Sum_probs=419.8

Q ss_pred             HHhCCCHHHHHHHHccCCHHHHHHHHHHHHHhcccCcchhHhhhCCchHHHHHHHHhcCCCHHHHHHHHHHHHhhccCcc
Q psy15604        117 DLATRAIPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQ  196 (986)
Q Consensus       117 i~~~g~i~~L~~ll~~~~~~~~~~a~~~L~~la~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~~~~~~a~~~L~~ls~~~~  196 (986)
                      ....++||.|+++|+++|..++..|+.++.+++.++..+..+...+++++.|+++|++..++++++.|+.+|.+++.+++
T Consensus        13 ~~~~~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~   92 (529)
T d1jdha_          13 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE   92 (529)
T ss_dssp             ----CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCch
Confidence            45578999999999999999999999999999999889998888877899999999987889999999999999999999


Q ss_pred             chHHHHhcCChHHHHHhhCCCCHhHHHHHHHHHHHHhcCCCCchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhc
Q psy15604        197 GLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAY  276 (986)
Q Consensus       197 ~~~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~a~~aL~~La~  276 (986)
                      ++..+++.|++|.|+.+|++++++++..|+.+|++++.+++..+..+.+.|+++.|+.+++++++.++..++.+|.+++.
T Consensus        93 ~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~  172 (529)
T d1jdha_          93 GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAY  172 (529)
T ss_dssp             HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999998888889999999999999999999999999999999999999


Q ss_pred             cChhhHHHHHhCCCHHHHHHHHhcCChHHHHHHHHHHHHHhhhCCCChHHHHHhccHHHHHHHhCCCCHHHHHHHHHHHh
Q psy15604        277 GNQESKLIILASQGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLR  356 (986)
Q Consensus       277 ~~~~~~~~~~~~g~v~~L~~ll~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~L~~ll~~~~~~~~~~~~~~L~  356 (986)
                      .+++.+..+...|+++.|+.+++.++.+.+++.+..++.+++.+++++..+.+.|+++.|..++.+++++++..+++++.
T Consensus       173 ~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~  252 (529)
T d1jdha_         173 GNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLR  252 (529)
T ss_dssp             TCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhccccccchhhhhhhhhhHHHHhcccchhhhhhhhhHHH
Confidence            88889999999999999999999888777899999999999999999999999999999999999999999999999999


Q ss_pred             cccccccc-----------cccccCCchHHHHHHHHHHHHHhh-ChhhHHHHHhcCCcHHHHHHhccCchhHHHHHHHHH
Q psy15604        357 NLSDAGTK-----------VSLLFNEIENIQRVAAGLLCELAQ-DKEGAETIEAEGATAPLTDLLHSRNEGVEILIQGVH  424 (986)
Q Consensus       357 ~ls~~~~~-----------i~ll~~~~~~~~~~a~~~L~~l~~-~~~~~~~l~~~g~l~~Lv~ll~~~~~~~~~~~~~~~  424 (986)
                      +++.....           +.++.++++.++..++.+|.+++. +++.+..+.+.|+++.|+.++.....          
T Consensus       253 ~ls~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~----------  322 (529)
T d1jdha_         253 NLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGD----------  322 (529)
T ss_dssp             HHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTT----------
T ss_pred             hccccccchhhhhhcchhhhhhcccccHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHHHHhhhc----------
Confidence            98765532           677788999999999999999985 45777778788888888776643221          


Q ss_pred             HHHhhccccccccccccccchhhccCCCCCCCCCchhHHHHhcCCCcHHHHHHHHHHhcCCchhhhhcCCHHHHHHHhcC
Q psy15604        425 KIFKIHKINIHRGCLMFPETLEEGIEIPSTQFDTAQPTAVQRLTEPSQMLKHAVVNLINYQDDADLATRAIPELIKLLND  504 (986)
Q Consensus       425 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~a~~~l~~~~~~~~~~~~~i~~L~~ll~~  504 (986)
                                                                                                      
T Consensus       323 --------------------------------------------------------------------------------  322 (529)
T d1jdha_         323 --------------------------------------------------------------------------------  322 (529)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCHHHHHHHHHHHHHhhhcccc----chhhhcccCcHHHHHHhhcCCCCHHHHHHHHHHHHHhhCCccchhhhhccCChH
Q psy15604        505 EDQVVVSQAAMMVHQLSKKEAS----RHAIMNSPQMVAALVHAISNSNDLETTKGAVGTLHNLSHHRQGLLAIFKSGGIP  580 (986)
Q Consensus       505 ~~~~~~~~a~~~L~~l~~~~~~----~~~l~~~~~~i~~L~~lL~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~~~i~  580 (986)
                       .++++..++.+|.+++.....    ...+.. .+.++.++.++....+..++..+++++.+++.+++++..+.+.|+++
T Consensus       323 -~~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~-~~~l~~L~~ll~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~~g~i~  400 (529)
T d1jdha_         323 -REDITEPAICALRHLTSRHQEAEMAQNAVRL-HYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIP  400 (529)
T ss_dssp             -CHHHHHHHHHHHHHHTSSSTTHHHHHHHHHH-TTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHH
T ss_pred             -chhHHHHHHHHhhcccchhhcchhhhhhHHh-cccchhHHHHHhccchHHHHHHHHHHHhhcchhhhhhhhhhhcccHH
Confidence             223333444444444332221    122222 47899999999877777889999999999999989999999999999


Q ss_pred             HHHHhcCCCCHhHHHHHHHHHHHhhcCCCCChHHHHHhCcHHHHHHhhcCCCHhHHHHHHHHHHHHhcCCcccHHHHHhC
Q psy15604        581 ALVKLLSSPVESVLFYAITTLHNLLLHQEGSKMAVRLAGGLQKMVLLLGRNNVKFLAIVTDCLQILAYGNQESKLIILAS  660 (986)
Q Consensus       581 ~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~v~~~g~v~~Lv~ll~~~~~~v~~~a~~aL~~L~~~~~~~~~~~~~~  660 (986)
                      .++.+|.+.+.+++..+.+...........                    ..+++...++.++.+++.. +..+..+.+.
T Consensus       401 ~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~al~~la~~-~~~r~~~~~~  459 (529)
T d1jdha_         401 RLVQLLVRAHQDTQRRTSMGGTQQQFVEGV--------------------RMEEIVEGCTGALHILARD-VHNRIVIRGL  459 (529)
T ss_dssp             HHHHHHHHHHHHHC-----------CBTTB--------------------CHHHHHHHHHHHHHHHTTS-HHHHHHHHHT
T ss_pred             HHHHHHhcCCHHHHHHHHhhhhhHHhhccc--------------------chHHHHHHHHHHHHHHccC-HHHHHHHHHC
Confidence            999999887777777766554433322111                    1234566778889999875 6778888889


Q ss_pred             CChHHHHHHHhcCChhHHHHHHHHHHHHhhcCCCCchhHHhcCcHHHHHHhhCCCCHHHHHHHHHHHHHhh
Q psy15604        661 QGPVELVRIMRSYDYEKLLWCTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGHPSQRLVQNCLWTLRNLS  731 (986)
Q Consensus       661 ~~~~~L~~ll~~~~~~~~~~~~~~~L~~Ls~~~~~~~~l~~~g~~~~L~~ll~~~~~~v~~~al~~L~nLs  731 (986)
                      ++++.|+++|.+++ +.++..++++|.+|+..++.+..+.+.|+++.|++++.++++.++..+..+|.+||
T Consensus       460 ~~i~~Lv~lL~~~~-~~v~~~a~~aL~~L~~~~~~~~~i~~~g~~~~L~~Ll~s~n~~v~~~a~~aL~~ls  529 (529)
T d1jdha_         460 NTIPLFVQLLYSPI-ENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS  529 (529)
T ss_dssp             TCHHHHHHGGGCSC-HHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHhCCCC-HHHHHHHHHHHHHHhcChhhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhC
Confidence            99999999999877 67788999999999988888899999999999999999999999999999999986
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} Back     information, alignment and structure
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure