Psyllid ID: psy15626


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEPN
ccEEEEEcccccHHHHHHHHHHHccEEEEEcccccccccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
ccEEEEEEcHHHHHHHHHHHHHccEEEEEcccccHHHHcccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
malcqlfiqpeaayssvstlgeagivqfrDVSITLDTQFnrfqeerpmCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKegvqiqenstfpnapnpreIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTqtffhepn
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFqrkfvsevrrcdeleRKIRYIEaeinkegvqiqenstfpnapnpREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLektqtffhepn
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHEPN
**LCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGV******************************ILELSQNAINLKSNYLELTELKHVLEKTQTF*****
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQI************REIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFH***
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKT********
MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFH***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPRExxxxxxxxxxxxxxxxxxxxxxxxxxxxYLELTELKHVLEKTQTFFHEPN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query153 2.2.26 [Sep-21-2011]
P30628 905 Probable V-type proton AT yes N/A 0.862 0.145 0.483 8e-34
Q9I8D0 838 V-type proton ATPase 116 yes N/A 0.862 0.157 0.490 2e-32
Q29466 838 V-type proton ATPase 116 yes N/A 0.862 0.157 0.490 2e-32
Q5R422 837 V-type proton ATPase 116 yes N/A 0.862 0.157 0.490 2e-32
Q93050 837 V-type proton ATPase 116 yes N/A 0.862 0.157 0.490 2e-32
Q8AVM5 831 V-type proton ATPase 116 N/A N/A 0.862 0.158 0.490 2e-32
Q9Z1G4 839 V-type proton ATPase 116 yes N/A 0.862 0.157 0.490 3e-32
A1A5G6 837 V-type proton ATPase 116 yes N/A 0.862 0.157 0.483 6e-32
P25286 838 V-type proton ATPase 116 yes N/A 0.862 0.157 0.483 5e-31
Q9HBG4 840 V-type proton ATPase 116 no N/A 0.836 0.152 0.493 1e-28
>sp|P30628|VPP1_CAEEL Probable V-type proton ATPase 116 kDa subunit a OS=Caenorhabditis elegans GN=unc-32 PE=2 SV=3 Back     alignment and function desciption
 Score =  142 bits (358), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 19/151 (12%)

Query: 1   MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRK 60
           M L QL++Q +A+Y  V+ LGE G+VQFRD                   LN  +++FQRK
Sbjct: 22  MCLAQLYLQSDASYQCVAELGELGLVQFRD-------------------LNPDVSSFQRK 62

Query: 61  FVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILE 120
           +V+EVRRCDE+ERK+RY+E EI K+ + + +    P+AP PRE+IDLE   E+ E+E+ E
Sbjct: 63  YVNEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPREMIDLEATFEKLENELRE 122

Query: 121 LSQNAINLKSNYLELTELKHVLEKTQTFFHE 151
           +++N   LK N+ ELTELKH+L KTQTFF E
Sbjct: 123 VNKNEETLKKNFSELTELKHILRKTQTFFEE 153




Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.
Caenorhabditis elegans (taxid: 6239)
>sp|Q9I8D0|VPP1_CHICK V-type proton ATPase 116 kDa subunit a isoform 1 OS=Gallus gallus GN=ATP6V0A1 PE=1 SV=1 Back     alignment and function description
>sp|Q29466|VPP1_BOVIN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1 Back     alignment and function description
>sp|Q5R422|VPP1_PONAB V-type proton ATPase 116 kDa subunit a isoform 1 OS=Pongo abelii GN=ATP6V0A1 PE=2 SV=1 Back     alignment and function description
>sp|Q93050|VPP1_HUMAN V-type proton ATPase 116 kDa subunit a isoform 1 OS=Homo sapiens GN=ATP6V0A1 PE=1 SV=3 Back     alignment and function description
>sp|Q8AVM5|VPP1_XENLA V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus laevis GN=atp6v0a1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z1G4|VPP1_MOUSE V-type proton ATPase 116 kDa subunit a isoform 1 OS=Mus musculus GN=Atp6v0a1 PE=1 SV=3 Back     alignment and function description
>sp|A1A5G6|VPP1_XENTR V-type proton ATPase 116 kDa subunit a isoform 1 OS=Xenopus tropicalis GN=atp6v0a1 PE=2 SV=1 Back     alignment and function description
>sp|P25286|VPP1_RAT V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus GN=Atp6v0a1 PE=2 SV=1 Back     alignment and function description
>sp|Q9HBG4|VPP4_HUMAN V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
347966205 831 AGAP001587-PA [Anopheles gambiae str. PE 0.862 0.158 0.673 7e-51
157138700 831 vacuolar proton atpases [Aedes aegypti] 0.862 0.158 0.684 1e-50
19577376 849 putative V-ATPase [Anopheles gambiae] 0.862 0.155 0.673 1e-50
170034276 833 vacuolar proton translocating ATPase 116 0.862 0.158 0.671 6e-50
312375499 821 hypothetical protein AND_14091 [Anophele 0.862 0.160 0.660 2e-49
340715857 995 PREDICTED: v-type proton ATPase 116 kDa 0.862 0.132 0.677 6e-49
350396756 834 PREDICTED: V-type proton ATPase 116 kDa 0.862 0.158 0.677 6e-49
322779447 848 hypothetical protein SINV_02691 [Solenop 0.862 0.155 0.677 6e-49
383862020 812 PREDICTED: V-type proton ATPase 116 kDa 0.862 0.162 0.671 7e-49
383862012 837 PREDICTED: V-type proton ATPase 116 kDa 0.862 0.157 0.671 7e-49
>gi|347966205|ref|XP_321521.2| AGAP001587-PA [Anopheles gambiae str. PEST] gi|333470164|gb|EAA43151.2| AGAP001587-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/153 (67%), Positives = 118/153 (77%), Gaps = 21/153 (13%)

Query: 1   MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRK 60
           MALCQ+FIQPEAAY+SVS LGE G VQFRD                   LN+ +NAFQRK
Sbjct: 10  MALCQMFIQPEAAYTSVSELGETGAVQFRD-------------------LNADVNAFQRK 50

Query: 61  FVSEVRRCDELERKIRYIEAEINKEGVQIQENST--FPNAPNPREIIDLENHLERTESEI 118
           FVSEVRRCDE+ERK+RY+E E+ K+ VQI E S   +P APNPREIIDLE  LE+TE+EI
Sbjct: 51  FVSEVRRCDEMERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDLEARLEKTENEI 110

Query: 119 LELSQNAINLKSNYLELTELKHVLEKTQTFFHE 151
           LELSQNA+NLKSNYLELTELKHVLE+TQ+FF E
Sbjct: 111 LELSQNAVNLKSNYLELTELKHVLERTQSFFFE 143




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157138700|ref|XP_001657344.1| vacuolar proton atpases [Aedes aegypti] gi|108869446|gb|EAT33671.1| AAEL014053-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|19577376|emb|CAD27758.1| putative V-ATPase [Anopheles gambiae] Back     alignment and taxonomy information
>gi|170034276|ref|XP_001845000.1| vacuolar proton translocating ATPase 116 kDa subunit a 1 [Culex quinquefasciatus] gi|167875633|gb|EDS39016.1| vacuolar proton translocating ATPase 116 kDa subunit a 1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|312375499|gb|EFR22861.1| hypothetical protein AND_14091 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|340715857|ref|XP_003396424.1| PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350396756|ref|XP_003484655.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|322779447|gb|EFZ09639.1| hypothetical protein SINV_02691 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|383862020|ref|XP_003706482.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 7 [Megachile rotundata] Back     alignment and taxonomy information
>gi|383862012|ref|XP_003706478.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like isoform 3 [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query153
FB|FBgn0028670 834 Vha100-2 "Vacuolar H[+] ATPase 0.666 0.122 0.689 7.5e-33
FB|FBgn0038613 844 Vha100-4 "Vacuolar H[+] ATPase 0.666 0.120 0.611 1.5e-28
FB|FBgn0028671 855 Vha100-1 "Vacuolar H[+] ATPase 0.666 0.119 0.607 1.6e-28
WB|WBGene00006768 905 unc-32 [Caenorhabditis elegans 0.666 0.112 0.549 1.8e-25
UNIPROTKB|P30628 905 unc-32 "Probable V-type proton 0.666 0.112 0.549 1.8e-25
ZFIN|ZDB-GENE-030131-3027 834 atp6v0a1a "ATPase, H+ transpor 0.666 0.122 0.529 3e-24
UNIPROTKB|F1PVS8 801 ATP6V0A1 "Uncharacterized prot 0.666 0.127 0.519 1.2e-23
UNIPROTKB|F1MH43 832 LOC785923 "Uncharacterized pro 0.666 0.122 0.519 1.3e-23
UNIPROTKB|F1S1D6 832 LOC100523018 "Uncharacterized 0.666 0.122 0.519 1.3e-23
UNIPROTKB|F5H569 837 ATP6V0A1 "V-type proton ATPase 0.666 0.121 0.519 1.3e-23
FB|FBgn0028670 Vha100-2 "Vacuolar H[+] ATPase 100kD subunit 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 368 (134.6 bits), Expect = 7.5e-33, P = 7.5e-33
 Identities = 71/103 (68%), Positives = 85/103 (82%)

Query:    50 LNSRMNAFQRKFVSEVRRCDELERKIRYIEAEINKEGVQIQE-NSTFPNAPNPREIIDLE 108
             LN  +NAFQRKFV+EVRRCDELERKIRYIE EI K+G+ + +     P APNPREIIDLE
Sbjct:    40 LNVNVNAFQRKFVTEVRRCDELERKIRYIETEIKKDGIVLPDIQDDIPRAPNPREIIDLE 99

Query:   109 NHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHE 151
              HLE+TESE++EL+QN +N+KSNYLELTEL+ VLE TQ FF +
Sbjct:   100 AHLEKTESEMIELAQNEVNMKSNYLELTELRKVLENTQGFFSD 142


GO:0000220 "vacuolar proton-transporting V-type ATPase, V0 domain" evidence=ISS
GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=ISS
GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA
GO:0033181 "plasma membrane proton-transporting V-type ATPase complex" evidence=IMP
GO:0005886 "plasma membrane" evidence=IDA
FB|FBgn0038613 Vha100-4 "Vacuolar H[+] ATPase 100kD subunit 4" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0028671 Vha100-1 "Vacuolar H[+] ATPase 100kD subunit 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00006768 unc-32 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P30628 unc-32 "Probable V-type proton ATPase 116 kDa subunit a" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3027 atp6v0a1a "ATPase, H+ transporting, lysosomal V0 subunit a isoform 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PVS8 ATP6V0A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MH43 LOC785923 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S1D6 LOC100523018 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F5H569 ATP6V0A1 "V-type proton ATPase 116 kDa subunit a isoform 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
pfam01496 707 pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni 1e-25
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family Back     alignment and domain information
 Score =  100 bits (252), Expect = 1e-25
 Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 19/135 (14%)

Query: 17  VSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIR 76
           V  LGE G+VQ RD                   LN  ++AFQRKFV+EVRRCDE+ERK+R
Sbjct: 1   VDALGELGLVQIRD-------------------LNEDVSAFQRKFVNEVRRCDEVERKLR 41

Query: 77  YIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELT 136
            +E++I K G+ +++    P+ P  +E +DLE  +   E+EI E+ +N  +L+    EL 
Sbjct: 42  KLESKIKKLGIPLKDTGGKPDVPPSKEFLDLEEEILDLEAEIKEVEENLESLEKEINELE 101

Query: 137 ELKHVLEKTQTFFHE 151
           E  +VL++ ++F  E
Sbjct: 102 EWLNVLDEEKSFLDE 116


This family consists of the 116kDa V-type ATPase (vacuolar (H+)-ATPases) subunits, as well as V-type ATP synthase subunit i. The V-type ATPases family are proton pumps that acidify intracellular compartments in eukaryotic cells for example yeast central vacuoles, clathrin-coated and synaptic vesicles. They have important roles in membrane trafficking processes. The 116kDa subunit (subunit a) in the V-type ATPase is part of the V0 functional domain responsible for proton transport. The a subunit is a transmembrane glycoprotein with multiple putative transmembrane helices it has a hydrophilic amino terminal and a hydrophobic carboxy terminal. It has roles in proton transport and assembly of the V-type ATPase complex. This subunit is encoded by two homologous gene in yeast VPH1 and STV1. Length = 707

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 153
KOG2189|consensus 829 100.0
PF01496 759 V_ATPase_I: V-type ATPase 116kDa subunit family ; 99.77
PRK05771 646 V-type ATP synthase subunit I; Validated 98.37
COG1269 660 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [E 94.89
PF14257262 DUF4349: Domain of unknown function (DUF4349) 92.92
PF10805106 DUF2730: Protein of unknown function (DUF2730); In 89.6
>KOG2189|consensus Back     alignment and domain information
Probab=100.00  E-value=3.4e-43  Score=320.87  Aligned_cols=132  Identities=61%  Similarity=0.939  Sum_probs=129.7

Q ss_pred             CceEEEEeccCcHHHHHHHhhhccceeeecccccchhhhcccccccccccCCCCChhhhchhhhhcchHHHHHHHHHHHH
Q psy15626          1 MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRKFVSEVRRCDELERKIRYIEA   80 (153)
Q Consensus         1 M~L~qL~ip~E~A~~~V~eLGelG~vqF~D~~~~~~~~~~~~~~~~~~~LN~~v~~fqR~fv~evrRcdemeRklr~l~~   80 (153)
                      |+|||||+|+|+||+||++||++|+|||||                   ||++|+||||+||+||||||||||+|||+++
T Consensus        10 M~L~Ql~l~~eaAy~~vaeLGelGlvqFrD-------------------LN~~v~afQR~fv~evrRcdemeRklrfl~~   70 (829)
T KOG2189|consen   10 MCLVQLFLQSEAAYQCVAELGELGLVQFRD-------------------LNPDVSAFQRKFVNEVRRCDEMERKLRFLES   70 (829)
T ss_pred             ceeeEEEecHHHHHHHHHHhhccCeeEeee-------------------CCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999                   9999999999999999999999999999999


Q ss_pred             HHHHcCCcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhccccCC
Q psy15626         81 EINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQTFFHE  151 (153)
Q Consensus        81 ei~k~~i~i~~~~~~~~~~~~~~id~le~~l~~le~~l~~l~~n~e~L~~~~~~l~E~~~VL~~~~~ff~~  151 (153)
                      ||.|+++++++.++.+++|++++|+++|++++++|+|++++++|.++|++++++|+|+++||++|+.||+.
T Consensus        71 ei~k~~i~~~~~~~~~~~p~~~~i~dle~~l~klE~el~eln~n~~~L~~n~~eL~E~~~vl~~t~~Ff~~  141 (829)
T KOG2189|consen   71 EIKKAGIPLPDLDESPPAPPPREIIDLEEQLEKLESELRELNANKEALKANYNELLELKYVLEKTDEFFST  141 (829)
T ss_pred             HHHhcCCCCCCccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence            99999999998888888999999999999999999999999999999999999999999999999999985



>PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PRK05771 V-type ATP synthase subunit I; Validated Back     alignment and domain information
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information
>PF14257 DUF4349: Domain of unknown function (DUF4349) Back     alignment and domain information
>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query153
3rrk_A 357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 1e-15
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Length = 357 Back     alignment and structure
 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 21/153 (13%), Positives = 37/153 (24%), Gaps = 23/153 (15%)

Query: 1   MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQRK 60
           M    +      A   ++ L +AG+V                       L        R 
Sbjct: 14  MEKLIVAGPKRLARELLAELQKAGVVHIDP-------------------LRPDELGEYRL 54

Query: 61  FVSEVRRCDELERKIRYIEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILE 120
             +E       E  +   E  +   G+         + P    + + E  L    S    
Sbjct: 55  SPTEEAELKRWEAVVSQAEQSLTVVGLATVP----SSKPFTGSLEEAEAVLRPVASRAEV 110

Query: 121 LSQNAINLKSNYLELTELKHVLEKTQTFFHEPN 153
           L +    L+     +       EK     H  +
Sbjct: 111 LGKERAALEEEIQTIELFGKAAEKLAALAHGLD 143


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query153
3rrk_A 357 V-type ATPase 116 kDa subunit; alpha beta fold, pr 99.53
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber} Back     alignment and structure
Probab=99.53  E-value=1.1e-13  Score=116.32  Aligned_cols=120  Identities=15%  Similarity=0.103  Sum_probs=101.9

Q ss_pred             CceEEEEeccCcHHHHHHHhhhccceeeecccccchhhhcccccccccccCCCCChhh--hchh-hhhcchHHHHHHHHH
Q psy15626          1 MALCQLFIQPEAAYSSVSTLGEAGIVQFRDVSITLDTQFNRFQEERPMCLNSRMNAFQ--RKFV-SEVRRCDELERKIRY   77 (153)
Q Consensus         1 M~L~qL~ip~E~A~~~V~eLGelG~vqF~D~~~~~~~~~~~~~~~~~~~LN~~v~~fq--R~fv-~evrRcdemeRklr~   77 (153)
                      |+.++|++|.+.++++|.+||++|.|||+|                   +|++++.|+  ++|. +++++|+++.+++++
T Consensus        14 M~kv~l~~~~~~~~~vl~~L~~lg~vhi~d-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~   74 (357)
T 3rrk_A           14 MEKLIVAGPKRLARELLAELQKAGVVHIDP-------------------LRPDELGEYRLSPTEEAELKRWEAVVSQAEQ   74 (357)
T ss_dssp             CEEEEEEECGGGHHHHHHHHHHHTCEEEEE-------------------ECGGGGGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeEHHHHHHHHHHHHHcCcEEEEe-------------------ccccccccccCCccchHHHhHHHHHHHHHHH
Confidence            999999999999999999999999999999                   999999999  8876 689999999999999


Q ss_pred             HHHHHHHcCCcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc
Q psy15626         78 IEAEINKEGVQIQENSTFPNAPNPREIIDLENHLERTESEILELSQNAINLKSNYLELTELKHVLEKTQ  146 (153)
Q Consensus        78 l~~ei~k~~i~i~~~~~~~~~~~~~~id~le~~l~~le~~l~~l~~n~e~L~~~~~~l~E~~~VL~~~~  146 (153)
                      +...+.++..+..       .+....++++++.+.+++.++.++.+....|+.+..++.+.+.|+....
T Consensus        75 ~~~~L~~~~~~~~-------~~~~~~~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~  136 (357)
T 3rrk_A           75 SLTVVGLATVPSS-------KPFTGSLEEAEAVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLA  136 (357)
T ss_dssp             HHHHHTCCCCCCS-------SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcccccccc-------cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence            9999987642210       1112348888888999999999999999999999999988866666544




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00