Psyllid ID: psy15675


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MFYAPFWSKTFLENTLVDDDTTPFGEEELSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMSTVSSMSSGLFFSQ
cccccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccEEEEcEEEEEEcccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccc
cccccccccccccccccccccccccHHcccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHEEEEcccHHHEEEEEEEEEEccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccccHHHHHHHHHHHHHHcc
mfyapfwsktflentlvdddttpfgeeelsrrgtlvhpyvTFFHLFFRSMAILSYMFTglfsssgfIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWnyvddqgkshwvfesrkgdlqnrvngteaRIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMkckmggnsdkSLMSTVSSmssglffsq
mfyapfwsktflentlvdddttpfgeeelsrrgtlvHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFesrkgdlqnrvNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMSTVSSMSSGLFFSQ
MFYAPFWSKTFLENTLVDDDTTPFGEEELSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNsdkslmstvssmssglffsQ
*FYAPFWSKTFLENTLVDDDTTPFGEEELSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKM***********************
************************************HPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVF***************ARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKM****************SGLFFS*
MFYAPFWSKTFLENTLVDDDTTPFGEEELSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMSTVSSMSSGLFFSQ
********************************GTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMS****MSSGLFF**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
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MFYAPFWSKTFLENTLVDDDTTPFGEEELSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMSTVSSMSSGLFFSQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query202 2.2.26 [Sep-21-2011]
Q8IQC1223 Uncharacterized Golgi app yes N/A 0.900 0.816 0.645 2e-54
Q29S14208 Golgi apparatus membrane yes N/A 0.851 0.826 0.516 5e-48
Q9D8T4205 Golgi apparatus membrane yes N/A 0.900 0.887 0.5 5e-48
Q5R9I4205 Golgi apparatus membrane no N/A 0.851 0.839 0.510 1e-47
A6NH52213 Golgi apparatus membrane yes N/A 0.846 0.802 0.527 1e-47
Q9NYZ1205 Golgi apparatus membrane no N/A 0.900 0.887 0.505 1e-47
Q96ET8276 Golgi apparatus membrane no N/A 0.688 0.503 0.523 9e-37
Q54LC9261 Uncharacterized Golgi app yes N/A 0.752 0.582 0.461 5e-33
Q18449247 Uncharacterized Golgi app yes N/A 0.688 0.562 0.457 5e-29
Q0UV43194 Golgi apparatus membrane N/A N/A 0.693 0.721 0.450 8e-28
>sp|Q8IQC1|TVP23_DROME Uncharacterized Golgi apparatus membrane protein-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2 Back     alignment and function desciption
 Score =  212 bits (539), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/189 (64%), Positives = 135/189 (71%), Gaps = 7/189 (3%)

Query: 8   SKTFLENTLVDDDTTPFGEEE----LSRRGT-LVHPYVTFFHLFFRSMAILSYMFTGLFS 62
           S T     L+DDDT PFGEE+     SR G    HPYVTFFHLFFR  AIL YMF G FS
Sbjct: 3   SATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWFS 62

Query: 63  SSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGD-LQNR 121
            S FI SFVF+VL LS DFWTVKNISGRL+VGLRWWNYVDD G SHWVFES+  +  Q+R
Sbjct: 63  DS-FITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSR 121

Query: 122 VNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGG 181
           VN  E RIFW  LI+CPV W LF L ALFG  FKW+LLV IA+ LN ANLYGY+KC  G 
Sbjct: 122 VNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMIAIALNAANLYGYVKCNYGA 181

Query: 182 NSDKSLMST 190
           N D +  +T
Sbjct: 182 NKDLNSAAT 190





Drosophila melanogaster (taxid: 7227)
>sp|Q29S14|TV23B_BOVIN Golgi apparatus membrane protein TVP23 homolog B OS=Bos taurus GN=TVP23B PE=2 SV=1 Back     alignment and function description
>sp|Q9D8T4|TV23B_MOUSE Golgi apparatus membrane protein TVP23 homolog B OS=Mus musculus GN=Tvp23b PE=1 SV=1 Back     alignment and function description
>sp|Q5R9I4|TV23B_PONAB Golgi apparatus membrane protein TVP23 homolog B OS=Pongo abelii GN=TVP23B PE=2 SV=1 Back     alignment and function description
>sp|A6NH52|TV23A_HUMAN Golgi apparatus membrane protein TVP23 homolog A OS=Homo sapiens GN=TVP23A PE=2 SV=3 Back     alignment and function description
>sp|Q9NYZ1|TV23B_HUMAN Golgi apparatus membrane protein TVP23 homolog B OS=Homo sapiens GN=TVP23B PE=2 SV=2 Back     alignment and function description
>sp|Q96ET8|TV23C_HUMAN Golgi apparatus membrane protein TVP23 homolog C OS=Homo sapiens GN=TVP23C PE=2 SV=3 Back     alignment and function description
>sp|Q54LC9|TV23B_DICDI Uncharacterized Golgi apparatus membrane protein-like protein 2 OS=Dictyostelium discoideum GN=DDB_G0286703 PE=3 SV=1 Back     alignment and function description
>sp|Q18449|YC2L_CAEEL Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4 OS=Caenorhabditis elegans GN=C34D4.4 PE=2 SV=1 Back     alignment and function description
>sp|Q0UV43|TVP23_PHANO Golgi apparatus membrane protein TVP23 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=TVP23 PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
332020570209 Uncharacterized FAM18-like protein [Acro 0.866 0.837 0.670 1e-63
383854488215 PREDICTED: uncharacterized FAM18-like pr 0.841 0.790 0.676 1e-62
307201904206 Uncharacterized FAM18-like protein CG502 0.886 0.868 0.638 1e-62
307166144205 Uncharacterized FAM18-like protein CG502 0.856 0.843 0.657 7e-62
110763012215 PREDICTED: uncharacterized FAM18-like pr 0.861 0.809 0.659 8e-62
380015144215 PREDICTED: uncharacterized FAM18-like pr 0.861 0.809 0.653 2e-61
340724028215 PREDICTED: uncharacterized FAM18-like pr 0.861 0.809 0.653 2e-61
350427854215 PREDICTED: uncharacterized FAM18-like pr 0.866 0.813 0.65 2e-61
332372636213 unknown [Dendroctonus ponderosae] 0.866 0.821 0.631 6e-59
242019645204 conserved hypothetical protein [Pediculu 0.811 0.803 0.654 2e-58
>gi|332020570|gb|EGI60978.1| Uncharacterized FAM18-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 142/179 (79%), Gaps = 4/179 (2%)

Query: 16  LVDDDTTPFGEEE-LSRRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIV 74
           L+DDDT  FGEEE +     L HPYVT FHL FR  AI+ Y+F GLFS+S FIASFV +V
Sbjct: 4   LMDDDTIAFGEEEEVQNSNKLKHPYVTLFHLAFRIAAIIVYLFCGLFSNS-FIASFVTVV 62

Query: 75  LLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSL 134
           LLLSMDFWTVKNI+GRLMVGLRWWNYVDD GKSHW+FES+KG  QNR+N TEARIFW +L
Sbjct: 63  LLLSMDFWTVKNITGRLMVGLRWWNYVDDDGKSHWIFESKKGAQQNRINATEARIFWLAL 122

Query: 135 IVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGGNSDKSLMSTVSS 193
           I+CP  W++  + ALFGF FKW+LLV IA+ LN ANLYGY+KCKMG  +DK++ +  S 
Sbjct: 123 ILCPFFWSMLFIAALFGFKFKWLLLVCIAIVLNGANLYGYVKCKMG--NDKNISTATSD 179




Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854488|ref|XP_003702753.1| PREDICTED: uncharacterized FAM18-like protein CG5021-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307201904|gb|EFN81533.1| Uncharacterized FAM18-like protein CG5021 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307166144|gb|EFN60393.1| Uncharacterized FAM18-like protein CG5021 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|110763012|ref|XP_392046.3| PREDICTED: uncharacterized FAM18-like protein CG5021-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380015144|ref|XP_003691569.1| PREDICTED: uncharacterized FAM18-like protein CG5021-like [Apis florea] Back     alignment and taxonomy information
>gi|340724028|ref|XP_003400387.1| PREDICTED: uncharacterized FAM18-like protein CG5021-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350427854|ref|XP_003494903.1| PREDICTED: uncharacterized FAM18-like protein CG5021-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332372636|gb|AEE61460.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|242019645|ref|XP_002430270.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212515377|gb|EEB17532.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
FB|FBgn0035944223 CG5021 [Drosophila melanogaste 0.861 0.780 0.668 1.3e-59
ZFIN|ZDB-GENE-050417-235199 zgc:112148 "zgc:112148" [Danio 0.811 0.824 0.520 4.2e-47
UNIPROTKB|F1NAL9220 FAM18A "Uncharacterized protei 0.816 0.75 0.543 5.4e-47
UNIPROTKB|A6NH52213 TVP23A "Golgi apparatus membra 0.836 0.793 0.528 5.4e-47
ZFIN|ZDB-GENE-050522-404203 tvp23b "trans-golgi network ve 0.801 0.798 0.550 8.8e-47
UNIPROTKB|E2QZU1205 FAM18B2 "Uncharacterized prote 0.797 0.785 0.553 2.3e-46
UNIPROTKB|E2RGA4205 FAM18B2 "Uncharacterized prote 0.797 0.785 0.553 2.3e-46
UNIPROTKB|F1PJM4213 FAM18A "Uncharacterized protei 0.811 0.769 0.543 2.3e-46
RGD|1566405222 Tvp23a "trans-golgi network ve 0.816 0.743 0.545 3e-46
UNIPROTKB|Q29S14208 TVP23B "Golgi apparatus membra 0.797 0.774 0.541 1e-45
FB|FBgn0035944 CG5021 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 121/181 (66%), Positives = 132/181 (72%)

Query:     8 SKTFLENTLVDDDTTPFGEE-EL---SRRGT-LVHPYVTFFHLFFRSMAILSYMFTGLFS 62
             S T     L+DDDT PFGEE E+   SR G    HPYVTFFHLFFR  AIL YMF G FS
Sbjct:     3 SATVRNVPLLDDDTIPFGEEDEMRDPSRAGQKYTHPYVTFFHLFFRGAAILIYMFCGWFS 62

Query:    63 SSGFIASFVFIVLLLSMDFWTVKNISGRLMVGLRWWNYVDDQGKSHWVFESRKGD-LQNR 121
              S FI SFVF+VL LS DFWTVKNISGRL+VGLRWWNYVDD G SHWVFES+  +  Q+R
Sbjct:    63 DS-FITSFVFVVLFLSADFWTVKNISGRLLVGLRWWNYVDDDGVSHWVFESKNSESYQSR 121

Query:   122 VNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLNFANLYGYMKCKMGG 181
             VN  E RIFW  LI+CPV W LF L ALFG  FKW+LLV IA+ LN ANLYGY+KC  G 
Sbjct:   122 VNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMIAIALNAANLYGYVKCNYGA 181

Query:   182 N 182
             N
Sbjct:   182 N 182




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0016021 "integral to membrane" evidence=IEA;NAS
ZFIN|ZDB-GENE-050417-235 zgc:112148 "zgc:112148" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NAL9 FAM18A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|A6NH52 TVP23A "Golgi apparatus membrane protein TVP23 homolog A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-404 tvp23b "trans-golgi network vesicle protein 23 homolog B (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2QZU1 FAM18B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2RGA4 FAM18B2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PJM4 FAM18A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1566405 Tvp23a "trans-golgi network vesicle protein 23 homolog A (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q29S14 TVP23B "Golgi apparatus membrane protein TVP23 homolog B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LEK2TVP23_ARATHNo assigned EC number0.38510.72770.7903yesN/A
A3LRT4TVP23_PICSTNo assigned EC number0.33890.80690.6848yesN/A
Q74ZP5TVP23_ASHGONo assigned EC number0.35250.73260.7363yesN/A
Q6FM91TVP23_CANGANo assigned EC number0.32230.73260.7551yesN/A
Q6BVH1TVP23_DEBHANo assigned EC number0.36150.80690.7180yesN/A
P38962TVP23_YEASTNo assigned EC number0.35060.72270.7336yesN/A
Q6CTK9TVP23_KLULANo assigned EC number0.34020.68810.7128yesN/A
Q4WQJ5TVP23_ASPFUNo assigned EC number0.41350.76730.8115yesN/A
Q9D8T4TV23B_MOUSENo assigned EC number0.50.90090.8878yesN/A
Q9NYZ1TV23B_HUMANNo assigned EC number0.50510.90090.8878noN/A
Q2UUK2TVP23_ASPORNo assigned EC number0.41950.68810.7164yesN/A
Q8IQC1TVP23_DROMENo assigned EC number0.64550.90090.8161yesN/A
Q29S14TV23B_BOVINNo assigned EC number0.51640.85140.8269yesN/A
A2Q9P5TVP23_ASPNCNo assigned EC number0.41250.68810.7239yesN/A
Q9Y7K7TVP23_SCHPONo assigned EC number0.41130.68310.6301yesN/A
A6NH52TV23A_HUMANNo assigned EC number0.52770.84650.8028yesN/A
Q5R9I4TV23B_PONABNo assigned EC number0.51090.85140.8390noN/A
B2ALT5TVP23_PODANNo assigned EC number0.36660.79200.8376yesN/A
Q6C7V5TVP23_YARLINo assigned EC number0.42330.77220.8666yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
pfam05832141 pfam05832, DUF846, Eukaryotic protein of unknown f 7e-54
>gnl|CDD|218768 pfam05832, DUF846, Eukaryotic protein of unknown function (DUF846) Back     alignment and domain information
 Score =  168 bits (427), Expect = 7e-54
 Identities = 75/142 (52%), Positives = 96/142 (67%), Gaps = 3/142 (2%)

Query: 36  VHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNISGRLMVGL 95
            HP   FFHL F+ +AIL Y+  GLFS + FI  F+ I+LLLS+DFW  KNI+GRL+VGL
Sbjct: 3   SHPVACFFHLLFKLLAILLYLLGGLFSDN-FILQFIIIILLLSLDFWLTKNITGRLLVGL 61

Query: 96  RWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFK 155
           RWWN VD+ G+S WVFESR        N  ++ +FW +L V P+ W +  +  L  F FK
Sbjct: 62  RWWNEVDEDGESKWVFESR--PPPFVPNAIDSNLFWLALYVSPLFWVVLAIINLISFKFK 119

Query: 156 WMLLVWIALTLNFANLYGYMKC 177
           W+LLV+IAL LN  NLYG+ KC
Sbjct: 120 WLLLVFIALFLNGTNLYGFYKC 141


This family consists of several of unknown function from a variety of eukaryotic organisms. Length = 141

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 202
KOG3195|consensus213 100.0
PF05832142 DUF846: Eukaryotic protein of unknown function (DU 100.0
>KOG3195|consensus Back     alignment and domain information
Probab=100.00  E-value=3e-67  Score=442.32  Aligned_cols=178  Identities=50%  Similarity=0.956  Sum_probs=167.1

Q ss_pred             cccccCCCCCCCCccc----cc-cCCCCCChHHHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHhhhhhheecc
Q psy15675         13 ENTLVDDDTTPFGEEE----LS-RRGTLVHPYVTFFHLFFRSMAILSYMFTGLFSSSGFIASFVFIVLLLSMDFWTVKNI   87 (202)
Q Consensus        13 ~~~~~~~d~~~~~~~~----~~-~~~~~~HP~~~~fhl~fK~~ai~~Yl~~~~f~~~~fv~~Fvi~ilLla~DFW~vKNI   87 (202)
                      ..++.+||+++++.||    +. ..+|++||++++||++||.+||++|++|.+|+++ |+.+||++++|+|+|||+||||
T Consensus         5 ~~~~~~~~v~~~d~~~~~~~~~r~~qk~~hP~~~fFHL~Fr~aAi~~Yil~~~f~nS-Fi~~fv~ivlLLs~DFW~VKNv   83 (213)
T KOG3195|consen    5 DSNLDVDNVSKFDAEEEITDPPRNFQKSSHPVALFFHLFFRGAAIVFYILCELFSNS-FITQFVVIVLLLSCDFWTVKNV   83 (213)
T ss_pred             ccCcchhccccCChhhhhhchhhhhhhccCchHHHHHHHhhhHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhheeecc
Confidence            4578888999999766    22 3378999999999999999999999999999999 9999999999999999999999


Q ss_pred             ccceeeeeeeeeeeCCCCceEEEEEeccCCCCCCCCccchhhhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q psy15675         88 SGRLMVGLRWWNYVDDQGKSHWVFESRKGDLQNRVNGTEARIFWTSLIVCPVMWALFLLTALFGFNFKWMLLVWIALTLN  167 (202)
Q Consensus        88 tGR~LVGLRWWnevde~G~s~W~FES~~~~~~~~~n~~ds~~FW~~L~~~p~~W~i~~i~~l~~l~~~wl~l~ii~l~L~  167 (202)
                      |||+||||||||++|+||+|||+|||+|++.+ .+|++|||+||++||++|++|+++++.+++++++.||+++++|++|+
T Consensus        84 tGRlLVGLRWWN~id~dG~ShW~FES~k~~s~-~~n~~dsriFWlgL~~~pv~W~if~v~al~~fk~~wL~lv~vg~~l~  162 (213)
T KOG3195|consen   84 TGRLLVGLRWWNEIDVDGESHWVFESAKQSSP-NVNAIDSRIFWLGLYLCPVIWIIFAVFALFRFKFKWLILVVVGIALN  162 (213)
T ss_pred             cccEEEeeeeeeecCCCCceeEEEeccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999997554 49999999999999999999999999999999999999999999999


Q ss_pred             hhhhheeeeeCCCCccchhhhhhhh
Q psy15675        168 FANLYGYMKCKMGGNSDKSLMSTVS  192 (202)
Q Consensus       168 ~~Nl~gy~kC~~~~k~~~~~~a~~~  192 (202)
                      ++|+|||.||+++++++.++.+++.
T Consensus       163 ~aN~~Gy~rC~~~a~~~~~q~~~ds  187 (213)
T KOG3195|consen  163 SANLYGYSRCDKDAKKKFQQVASDS  187 (213)
T ss_pred             hhhhheeeecCCccchhHHHHHHHH
Confidence            9999999999999999999988765



>PF05832 DUF846: Eukaryotic protein of unknown function (DUF846); InterPro: IPR008564 This family consists of a number of conserved eukaryotic proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00