Psyllid ID: psy15831

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQEDDEHPEFNY
ccEEEEcccHHHHHHHHHHHHHHHHcccccHHHcccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHccccEEEEccHHHcccccccccccccccccccccccccccccHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHcccccccccccccccccc
cccEEEEEcHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccccHHHHHHHccccccccHHHHHHHHcccEEEEEEcccHHcccccccccccEEccccccccEccccccHHHHHHHHcccccEEEEEEcccccHHHHHHcccEEEEcccccEccccEccccHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccccccccccccccccHccc
MLNAVVDERFNLALEEAKQVDILLAASTKSveeigrdtpllgvpltvkESVAvkgcsnnagrikpkeriatddAETVRLLRQAGAIILCVtntpelcmnwetfnkatgttnnpydtrrtpggssggeaALLSSGASIVGVASdiagscripamftgvfghkpspgfvsnvghmpssedkmwNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYmeddgsctltdgvdlDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMngincpyqeddehpefny
MLNAVVDERFNLALEEAKQVDILLAASTksveeigrdtpllgvpltvkesvavkgcsnnagrikpkeriatddaETVRLLRQAGAIILCVTNTPELCMNWETFnkatgttnnpydTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHleykqgikaqkvniDLEDVFELVSMVLLKMNGincpyqeddehpefny
MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPggssggeaallssgasIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQEDDEHPEFNY
******DERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRI****RIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKAT**************************GASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVG******DKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPY***********
MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPY***********
MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQED********
MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSS********SGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQEDDEH*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQEDDEHPEFNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query304 2.2.26 [Sep-21-2011]
Q6GMR7 532 Fatty-acid amide hydrolas yes N/A 0.878 0.501 0.429 2e-53
Q6DH69 532 Fatty-acid amide hydrolas yes N/A 0.878 0.501 0.411 4e-46
Q05AM4 526 Fatty-acid amide hydrolas no N/A 0.878 0.507 0.418 5e-43
Q17449 572 Fatty acid amide hydrolas no N/A 0.5 0.265 0.393 1e-26
Q46E35 475 Glutamyl-tRNA(Gln) amidot yes N/A 0.802 0.513 0.306 6e-26
Q8THJ1 476 Glutamyl-tRNA(Gln) amidot yes N/A 0.838 0.535 0.292 8e-26
Q8PXJ1 476 Glutamyl-tRNA(Gln) amidot yes N/A 0.753 0.481 0.316 2e-25
O59805 533 Putative amidase C550.07 yes N/A 0.542 0.309 0.391 4e-25
B8I601 486 Glutamyl-tRNA(Gln) amidot yes N/A 0.769 0.481 0.311 9e-24
Q9RTA9 482 Glutamyl-tRNA(Gln) amidot yes N/A 0.601 0.379 0.378 1e-23
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1 Back     alignment and function desciption
 Score =  209 bits (532), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/270 (42%), Positives = 156/270 (57%), Gaps = 3/270 (1%)

Query: 1   MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNA 60
           M+N +V  RF  A++EA  VD  LA   +    +    P LGVPLTVKE+  ++G  N++
Sbjct: 84  MINGIVKYRFEEAMKEAHAVDQKLAEKQEDEATLENKWPFLGVPLTVKEAFQLQGMPNSS 143

Query: 61  GRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTP 120
           G +  ++ IA  DA  V LL+ AGAI L +TN  ELCM +E+ NK  G +NNPYD +   
Sbjct: 144 GLMNRRDAIAKTDATVVALLKGAGAIPLGITNCSELCMWYESSNKIYGRSNNPYDLQHIV 203

Query: 121 GGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKM 180
           GGSSGGE   L++  S++GV SDI GS R+PA F G+FGHKPSPG V N G  P +    
Sbjct: 204 GGSSGGEGCTLAAACSVIGVGSDIGGSIRMPAFFNGIFGHKPSPGVVPNKGQFPLAVGAQ 263

Query: 181 WNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTD 240
              +   G + RYAEDL  +L +M       K L+L   V ++D+K ++ME DG   L  
Sbjct: 264 -ELFLCTGPMCRYAEDLAPMLKVMAG--PGIKRLKLDTKVHLKDLKFYWMEHDGGSFLMS 320

Query: 241 GVDLDIKEGIRKAVHHLEYKQGIKAQKVNI 270
            VD D+    +K V HLE   G   Q V +
Sbjct: 321 KVDQDLIMTQKKVVVHLETILGASVQHVKL 350
Degrades bioactive fatty acid amides like oleamide, the endogenous cannabinoid, anandamide and myristic amide to their corresponding acids, thereby serving to terminate the signaling functions of these molecules. Hydrolyzes monounsaturated substrate anandamide preferentially as compared to polyunsaturated substrates.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 9EC: 9
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1 Back     alignment and function description
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1 Back     alignment and function description
>sp|Q17449|FAAH1_CAEEL Fatty acid amide hydrolase 1 OS=Caenorhabditis elegans GN=faah-1 PE=2 SV=1 Back     alignment and function description
>sp|Q46E35|GATA_METBF Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q8THJ1|GATA_METAC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q8PXJ1|GATA_METMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|O59805|YJV7_SCHPO Putative amidase C550.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.07 PE=3 SV=1 Back     alignment and function description
>sp|B8I601|GATA_CLOCE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=gatA PE=3 SV=1 Back     alignment and function description
>sp|Q9RTA9|GATA_DEIRA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=gatA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
340722805 525 PREDICTED: fatty-acid amide hydrolase 2- 0.930 0.539 0.505 3e-79
350424271 508 PREDICTED: fatty-acid amide hydrolase 2- 0.875 0.523 0.514 8e-78
170030527 551 amidase [Culex quinquefasciatus] gi|1678 0.960 0.529 0.493 1e-74
383864475 542 PREDICTED: fatty-acid amide hydrolase 2- 0.930 0.522 0.520 4e-74
332026705 519 Fatty-acid amide hydrolase 2 [Acromyrmex 0.960 0.562 0.476 3e-73
347966408 559 AGAP001699-PA [Anopheles gambiae str. PE 0.937 0.509 0.488 2e-72
347966410 519 AGAP001699-PB [Anopheles gambiae str. PE 0.937 0.549 0.481 2e-72
157112536 553 amidase [Aedes aegypti] gi|108878046|gb| 0.960 0.528 0.486 7e-72
357622782 527 hypothetical protein KGM_07427 [Danaus p 0.980 0.565 0.450 9e-72
307192601 475 Fatty-acid amide hydrolase 2 [Harpegnath 0.967 0.618 0.5 3e-70
>gi|340722805|ref|XP_003399792.1| PREDICTED: fatty-acid amide hydrolase 2-like [Bombus terrestris] Back     alignment and taxonomy information
 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 145/287 (50%), Positives = 201/287 (70%), Gaps = 4/287 (1%)

Query: 1   MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNA 60
           ++NA+VD RFN A++EA++VD LLA++TK+ EE+  +TP LGVP+TVKES AV+G S   
Sbjct: 81  VINAIVDSRFNAAIQEAQEVDKLLASTTKTEEELAHETPFLGVPITVKESFAVEGMSYMV 140

Query: 61  GRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTP 120
           G  K   + AT++A  V L+R+AGAI+L V+NTPELC+NWET NK TGTT NPYDTR+TP
Sbjct: 141 GVKKKSSQKATENASVVSLVRKAGAIVLLVSNTPELCLNWETNNKVTGTTKNPYDTRKTP 200

Query: 121 GGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKM 180
           GGSSGGEAAL+SS ASI G+ SDIAGS R+PAMF GVFGH+P+ G VS  GH P S D+ 
Sbjct: 201 GGSSGGEAALISSAASIAGIVSDIAGSARLPAMFCGVFGHRPTSGLVSAEGHRPYSHDES 260

Query: 181 WNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTD 240
           +  Y+T G + RYAEDL L++ +M    E  K     + V ++DIK +Y+ED   C +T+
Sbjct: 261 FTVYYTPGAMVRYAEDLSLMMRIMCRSEETRKKFE--QKVCLKDIKFYYLED--CCVITN 316

Query: 241 GVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELVSMVLLKMN 287
            ++ D+K+ ++K   ++E   G K +K  +   +    +S  +L +N
Sbjct: 317 SINKDVKQAMKKLRTYIETTYGFKVEKARLPAMEFALNISAFMLSIN 363

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350424271|ref|XP_003493741.1| PREDICTED: fatty-acid amide hydrolase 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|170030527|ref|XP_001843140.1| amidase [Culex quinquefasciatus] gi|167867381|gb|EDS30764.1| amidase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|383864475|ref|XP_003707704.1| PREDICTED: fatty-acid amide hydrolase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|332026705|gb|EGI66814.1| Fatty-acid amide hydrolase 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|347966408|ref|XP_321392.5| AGAP001699-PA [Anopheles gambiae str. PEST] gi|333470071|gb|EAA00887.6| AGAP001699-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|347966410|ref|XP_003435909.1| AGAP001699-PB [Anopheles gambiae str. PEST] gi|333470072|gb|EGK97504.1| AGAP001699-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|157112536|ref|XP_001651825.1| amidase [Aedes aegypti] gi|108878046|gb|EAT42271.1| AAEL006181-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357622782|gb|EHJ74177.1| hypothetical protein KGM_07427 [Danaus plexippus] Back     alignment and taxonomy information
>gi|307192601|gb|EFN75789.1| Fatty-acid amide hydrolase 2 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
FB|FBgn0038803 552 CG5191 [Drosophila melanogaste 0.963 0.530 0.417 5.1e-58
FB|FBgn0037547 530 CG7910 [Drosophila melanogaste 0.973 0.558 0.388 2.9e-48
FB|FBgn0033717 529 CG8839 [Drosophila melanogaste 0.881 0.506 0.391 6e-48
FB|FBgn0037548 536 CG7900 [Drosophila melanogaste 0.970 0.550 0.392 1.2e-44
UNIPROTKB|Q6GMR7 532 FAAH2 "Fatty-acid amide hydrol 0.927 0.530 0.386 3.9e-44
ZFIN|ZDB-GENE-040718-453 532 faah2a "fatty acid amide hydro 0.904 0.516 0.369 3.2e-42
WB|WBGene00013164 535 Y53F4B.18 [Caenorhabditis eleg 0.950 0.540 0.361 4e-42
ZFIN|ZDB-GENE-061027-358 526 faah2b "fatty acid amide hydro 0.871 0.503 0.385 9.6e-41
FB|FBgn0039341 523 CG5112 [Drosophila melanogaste 0.838 0.487 0.342 3.8e-32
UNIPROTKB|Q0C2J1 454 HNE_1334 "Amidase family prote 0.677 0.453 0.362 6.2e-23
FB|FBgn0038803 CG5191 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 127/304 (41%), Positives = 182/304 (59%)

Query:     1 MLNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNA 60
             ++NA+V +RF  ALEEA+++D ++A    SVE +   TPLLG+P+TVKES+AVKG +N A
Sbjct:    99 LINAIVQDRFEEALEEAREIDNVIAMGINSVESMEELTPLLGIPVTVKESIAVKGMTNQA 158

Query:    61 GRIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTP 120
             GR+    +IA  DA  V  ++++G IIL V+NTPELC+ WET+N  TG T NPYD +RTP
Sbjct:   159 GRVFKTPQIAKSDAPVVEQIKRSGGIILLVSNTPELCLLWETYNNVTGQTKNPYDLKRTP 218

Query:   121 XXXXXXXXXXXXXXXXIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKM 180
                             ++G+ SDI GS R+PAMF+G++GHKP+P  VS  GH P+S+   
Sbjct:   219 GGSSGGEAALLASGASLLGLTSDIGGSSRLPAMFSGIWGHKPTPYAVSFKGHHPTSDFPK 278

Query:   181 WNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVIVQDIKVFYMEDDGSCTLTD 240
             W  +FTI  + RYA+DLPL+L  M SD    K L L  P+ V  I+ F+M++DG   +  
Sbjct:   279 WGDFFTIAPMTRYAKDLPLLLKCM-SDPTGPK-LTLDRPISVNGIRFFFMDNDGPSGMMR 336

Query:   241 GVDLDIKEGIRKAVHHLEYKQ-GIKAQKVNIDLEDVFELVSMVLLKMNGINCPYQ--EDD 297
              +  D+   I +       K+  I+  K ++D+     L +M  L M  I   Y   E+ 
Sbjct:   337 PLSRDLHAAINRVATDFNAKRVNIRKMKWSLDIS----LSAM--LTMKNIETIYHKTEEG 390

Query:   298 EHPE 301
             E P+
Sbjct:   391 EQPK 394
GO:0050567 "glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity" evidence=ISS
FB|FBgn0037547 CG7910 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0033717 CG8839 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0037548 CG7900 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GMR7 FAAH2 "Fatty-acid amide hydrolase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-453 faah2a "fatty acid amide hydrolase 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00013164 Y53F4B.18 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061027-358 faah2b "fatty acid amide hydrolase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0039341 CG5112 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q0C2J1 HNE_1334 "Amidase family protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.1.99LOW CONFIDENCE prediction!
3rd Layer3.5.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
pfam01425 431 pfam01425, Amidase, Amidase 2e-61
PRK06170 490 PRK06170, PRK06170, amidase; Provisional 6e-57
COG0154 475 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransf 3e-55
PRK07487 469 PRK07487, PRK07487, amidase; Provisional 1e-39
PRK07488 472 PRK07488, PRK07488, indole acetimide hydrolase; Va 2e-38
PRK12470 462 PRK12470, PRK12470, amidase; Provisional 2e-38
PRK06061 483 PRK06061, PRK06061, amidase; Provisional 1e-35
PRK00012 459 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransf 2e-34
TIGR00132 460 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) a 2e-29
TIGR02715 452 TIGR02715, amido_AtzE, amidohydrolase, AtzE family 5e-29
PRK09201 465 PRK09201, PRK09201, amidase; Provisional 5e-29
PRK06529 482 PRK06529, PRK06529, amidase; Provisional 1e-28
PRK07486 484 PRK07486, PRK07486, amidase; Provisional 2e-28
PRK06169 466 PRK06169, PRK06169, putative amidase; Provisional 2e-28
PRK07042 464 PRK07042, PRK07042, amidase; Provisional 4e-24
PRK07056 454 PRK07056, PRK07056, amidase; Provisional 7e-24
PRK08137 497 PRK08137, PRK08137, amidase; Provisional 2e-23
PRK06707 536 PRK06707, PRK06707, amidase; Provisional 1e-20
TIGR02713 561 TIGR02713, allophanate_hyd, allophanate hydrolase 1e-19
PRK05962 424 PRK05962, PRK05962, amidase; Validated 1e-19
PRK07235 502 PRK07235, PRK07235, amidase; Provisional 2e-19
PRK07869 468 PRK07869, PRK07869, amidase; Provisional 3e-19
PRK06828 491 PRK06828, PRK06828, amidase; Provisional 1e-18
PRK08310 395 PRK08310, PRK08310, amidase; Provisional 1e-18
PRK08186 600 PRK08186, PRK08186, allophanate hydrolase; Provisi 2e-17
PRK06102 452 PRK06102, PRK06102, hypothetical protein; Provisio 2e-17
PLN02722 422 PLN02722, PLN02722, indole-3-acetamide amidohydrol 6e-16
PRK11910 615 PRK11910, PRK11910, amidase; Provisional 2e-15
PRK07139 439 PRK07139, PRK07139, amidase; Provisional 2e-14
PRK06565 566 PRK06565, PRK06565, amidase; Validated 1e-13
>gnl|CDD|216494 pfam01425, Amidase, Amidase Back     alignment and domain information 
 Score =  200 bits (511), Expect = 2e-61
 Identities = 91/265 (34%), Positives = 127/265 (47%), Gaps = 25/265 (9%)

Query: 2   LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAG 61
           LNA V   F  AL +AK  D   A   K         PL GVP+++K+++ VKG    AG
Sbjct: 17  LNAFVTVFFEEALAQAKAADKRRARKEKG--------PLHGVPISLKDNIDVKGVPTTAG 68

Query: 62  RIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPG 121
               +      DA  V  LR AGA+IL  TN  E  M   T N A G T NP+D  RTPG
Sbjct: 69  SKALEGYPPPYDATVVERLRAAGAVILGKTNMDEFAMGSTTENSAFGPTRNPWDLSRTPG 128

Query: 122 GSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMW 181
           GSSGG AA +++G   + + +D  GS RIPA F G+ G KP+ G VS  G +P S     
Sbjct: 129 GSSGGSAAAVAAGLVPLAIGTDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPYS----- 183

Query: 182 NTYFTIGLLARYAEDLPLVLHLMI--------SDREQAKSLRLLEPVIVQDIKVFYMEDD 233
           ++   +G LAR  ED  L+L ++         S               ++ +++    +D
Sbjct: 184 SSLDHVGPLARTVEDAALLLDVIAGYDPADPTSAPSPVPDFAEPLKKSLKGLRIGVPRED 243

Query: 234 GSCTLTDGVDLDIKEGIRKAVHHLE 258
              +L      +++  +RKA   LE
Sbjct: 244 FYFSLDP----EVQRAVRKAAAALE 264

Length = 431
>gnl|CDD|235723 PRK06170, PRK06170, amidase; Provisional Back     alignment and domain information
>gnl|CDD|223232 COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|236029 PRK07487, PRK07487, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236030 PRK07488, PRK07488, indole acetimide hydrolase; Validated Back     alignment and domain information
>gnl|CDD|171524 PRK12470, PRK12470, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235686 PRK06061, PRK06061, amidase; Provisional Back     alignment and domain information
>gnl|CDD|234572 PRK00012, gatA, aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>gnl|CDD|232842 TIGR00132, gatA, aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit Back     alignment and domain information
>gnl|CDD|233982 TIGR02715, amido_AtzE, amidohydrolase, AtzE family Back     alignment and domain information
>gnl|CDD|236409 PRK09201, PRK09201, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180608 PRK06529, PRK06529, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236028 PRK07486, PRK07486, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180437 PRK06169, PRK06169, putative amidase; Provisional Back     alignment and domain information
>gnl|CDD|235915 PRK07042, PRK07042, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235921 PRK07056, PRK07056, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235855 PRK06707, PRK06707, amidase; Provisional Back     alignment and domain information
>gnl|CDD|233981 TIGR02713, allophanate_hyd, allophanate hydrolase Back     alignment and domain information
>gnl|CDD|168315 PRK05962, PRK05962, amidase; Validated Back     alignment and domain information
>gnl|CDD|235979 PRK07235, PRK07235, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181154 PRK07869, PRK07869, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180715 PRK06828, PRK06828, amidase; Provisional Back     alignment and domain information
>gnl|CDD|181375 PRK08310, PRK08310, amidase; Provisional Back     alignment and domain information
>gnl|CDD|236177 PRK08186, PRK08186, allophanate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|235698 PRK06102, PRK06102, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|166363 PLN02722, PLN02722, indole-3-acetamide amidohydrolase Back     alignment and domain information
>gnl|CDD|183377 PRK11910, PRK11910, amidase; Provisional Back     alignment and domain information
>gnl|CDD|235945 PRK07139, PRK07139, amidase; Provisional Back     alignment and domain information
>gnl|CDD|180626 PRK06565, PRK06565, amidase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
COG0154 475 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su 100.0
PF01425 441 Amidase: Amidase; InterPro: IPR000120 Amidase sign 100.0
PRK07487 469 amidase; Provisional 100.0
PRK00012 459 gatA aspartyl/glutamyl-tRNA amidotransferase subun 100.0
PRK05962 424 amidase; Validated 100.0
PRK06170 490 amidase; Provisional 100.0
PRK06169 466 putative amidase; Provisional 100.0
TIGR00132 460 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) 100.0
PRK07056 454 amidase; Provisional 100.0
PRK06102 452 hypothetical protein; Provisional 100.0
PRK07488 472 indole acetimide hydrolase; Validated 100.0
PRK07042 464 amidase; Provisional 100.0
PRK07486 484 amidase; Provisional 100.0
PRK08137 497 amidase; Provisional 100.0
TIGR02715 452 amido_AtzE amidohydrolase, AtzE family. Members of 100.0
PRK12470 462 amidase; Provisional 100.0
PRK09201 465 amidase; Provisional 100.0
PRK07869 468 amidase; Provisional 100.0
PRK06061 483 amidase; Provisional 100.0
PRK06529 482 amidase; Provisional 100.0
PRK07235 502 amidase; Provisional 100.0
TIGR02713 561 allophanate_hyd allophanate hydrolase. Allophanate 100.0
PRK08186 600 allophanate hydrolase; Provisional 100.0
PRK06828 491 amidase; Provisional 100.0
PRK11910 615 amidase; Provisional 100.0
PRK06707 536 amidase; Provisional 100.0
PRK07139 439 amidase; Provisional 100.0
PRK06565 566 amidase; Validated 100.0
PRK08310 395 amidase; Provisional 100.0
PLN02722 422 indole-3-acetamide amidohydrolase 100.0
KOG1211|consensus 506 100.0
KOG1212|consensus 560 100.0
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=8.2e-72  Score=546.74  Aligned_cols=276  Identities=34%  Similarity=0.454  Sum_probs=241.2

Q ss_pred             eeEEEecCHHHHHH--HHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHH
Q psy15831          2 LNAVVDERFNLALE--EAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRL   79 (304)
Q Consensus         2 lna~~~~~~~~al~--~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~   79 (304)
                      +||++....|+++.  +|+++|+++++|+       ..+||+||||+|||||+++|++||+||+.++++++++|+++|+|
T Consensus        41 ~na~~~~~~e~a~~~~~A~~~d~~~~~g~-------~~gpL~GvPiavKDn~~~~G~~Tt~gS~~l~~~~p~~DA~vV~r  113 (475)
T COG0154          41 LNAFVAVDPEAALALAEAAAADARLAAGE-------PLGPLAGVPIAVKDNIDTAGLPTTAGSKALEDYVPPYDATVVER  113 (475)
T ss_pred             CCEEEEeChhhcchHHHHHHHHHHHhcCC-------CCCCcCCceEEEeeccccCCCccCccChhhccCCCCcCcHHHHH
Confidence            69999999998866  9999999999884       25899999999999999999999999999999999999999999


Q ss_pred             HHHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCcee
Q psy15831         80 LRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFG  159 (304)
Q Consensus        80 L~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~g  159 (304)
                      |+++|||++|||||+||+|+..++|++||+|+||||+.|+|||||||||+|||++++++++|||||||||+||+||||||
T Consensus       114 L~~aGaviiGKTNm~Efa~g~~~~~s~~G~t~NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGGSIR~PAa~cGvvG  193 (475)
T COG0154         114 LRAAGAVILGKTNMDEFAMGSSTENSAFGPTRNPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGGSIRIPAAFCGLVG  193 (475)
T ss_pred             HHHCCCEEEeecCCchhhcCCCCCCCCCCCCCCCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCCchhhhhhhhCcee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCcccccccc----C---CccccCCcEEEEECC
Q psy15831        160 HKPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRL----L---EPVIVQDIKVFYMED  232 (304)
Q Consensus       160 lkPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~----~---~~~~~~~lrig~~~~  232 (304)
                      ||||+||||+.|++|.++     ++|++|||+|||+|+++++++|.+.|+...+...    .   .....+++|||++.+
T Consensus       194 lKPT~Grvsr~g~~~~a~-----sld~~GplartV~D~a~l~~v~~g~D~~d~~~~~~~~~~~~~~~~~~~~lrigv~~~  268 (475)
T COG0154         194 LKPTYGRVSRYGVVPLAS-----SLDQIGPLARTVRDAALLLDVIAGPDPRDSPLPPPPPVPPALAGKDLKGLRIGVPKE  268 (475)
T ss_pred             eCCCCCccCCCCCccccC-----CcCccCcccCCHHHHHHHHHHHcCCCCcccccccccCccchhhccCCCCcEEEEECc
Confidence            999999999999999998     8999999999999999999999996322111111    1   122567899999988


Q ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChH--HHHHHHHHHHhcccCccccccc
Q psy15831        233 DGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLE--DVFELVSMVLLKMNGINCPYQE  295 (304)
Q Consensus       233 ~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~--~~~~~~~~~~~~~~g~~~~~~~  295 (304)
                      ..   ...+.+++++++++++++.|+++ |++|+++++ .+.  ..+..|.  +..++++.+.++.
T Consensus       269 ~~---~~~~~~~~v~~~~~~a~~~l~~~-Ga~v~~v~lp~~~~~~~~~~~~--~~~~~~~~~~~~~  328 (475)
T COG0154         269 LG---GGGPLDPDVRAAFEAAVKALEAA-GAEVVEVSLPLLSDDYALAAYY--LARFDGERYGLRA  328 (475)
T ss_pred             cc---ccCCCcHHHHHHHHHHHHHHHHC-CCEEEeccCCchhhhhhhhHHH--HHHhhhhhhhhcc
Confidence            53   22467899999999999999995 999999987 233  3333442  4555666666553

>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence Back     alignment and domain information
>PRK07487 amidase; Provisional Back     alignment and domain information
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed Back     alignment and domain information
>PRK05962 amidase; Validated Back     alignment and domain information
>PRK06170 amidase; Provisional Back     alignment and domain information
>PRK06169 putative amidase; Provisional Back     alignment and domain information
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit Back     alignment and domain information
>PRK07056 amidase; Provisional Back     alignment and domain information
>PRK06102 hypothetical protein; Provisional Back     alignment and domain information
>PRK07488 indole acetimide hydrolase; Validated Back     alignment and domain information
>PRK07042 amidase; Provisional Back     alignment and domain information
>PRK07486 amidase; Provisional Back     alignment and domain information
>PRK08137 amidase; Provisional Back     alignment and domain information
>TIGR02715 amido_AtzE amidohydrolase, AtzE family Back     alignment and domain information
>PRK12470 amidase; Provisional Back     alignment and domain information
>PRK09201 amidase; Provisional Back     alignment and domain information
>PRK07869 amidase; Provisional Back     alignment and domain information
>PRK06061 amidase; Provisional Back     alignment and domain information
>PRK06529 amidase; Provisional Back     alignment and domain information
>PRK07235 amidase; Provisional Back     alignment and domain information
>TIGR02713 allophanate_hyd allophanate hydrolase Back     alignment and domain information
>PRK08186 allophanate hydrolase; Provisional Back     alignment and domain information
>PRK06828 amidase; Provisional Back     alignment and domain information
>PRK11910 amidase; Provisional Back     alignment and domain information
>PRK06707 amidase; Provisional Back     alignment and domain information
>PRK07139 amidase; Provisional Back     alignment and domain information
>PRK06565 amidase; Validated Back     alignment and domain information
>PRK08310 amidase; Provisional Back     alignment and domain information
>PLN02722 indole-3-acetamide amidohydrolase Back     alignment and domain information
>KOG1211|consensus Back     alignment and domain information
>KOG1212|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
3h0l_A 478 Structure Of Trna-Dependent Amidotransferase Gatcab 4e-19
2dc0_A 434 Crystal Structure Of Amidase Length = 434 8e-17
3kfu_E 471 Crystal Structure Of The Transamidosome Length = 47 1e-13
3al0_A 475 Crystal Structure Of The Glutamine Transamidosome F 3e-12
3a1k_A 521 Crystal Structure Of Rhodococcus Sp. N771 Amidase L 4e-12
3a1i_A 521 Crystal Structure Of Rhodococcus Sp. N-771 Amidase 9e-12
1m21_A 503 Crystal Structure Analysis Of The Peptide Amidase P 2e-11
3a2p_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 4e-11
3a2q_A 493 Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolas 9e-11
2gi3_A 476 Crystal Structure Of Glutamyl-Trna(Gln) Amidotransf 6e-10
2df4_A 485 Structure Of Trna-Dependent Amidotransferase Gatcab 2e-09
1mt5_A 537 Crystal Structure Of Fatty Acid Amide Hydrolase Len 3e-08
2vya_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Con 3e-08
2wap_A 543 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 3e-08
4do3_A 571 Structure Of Faah With A Non-steroidal Anti-inflamm 3e-08
4hbp_A 550 Crystal Structure Of Faah In Complex With Inhibitor 3e-08
3qk5_A 587 Crystal Structure Of Fatty Acid Amide Hydrolase Wit 3e-08
2wj1_A 573 3d-Crystal Structure Of Humanized-Rat Fatty Acid Am 3e-08
4gyr_A 621 Granulibacter Bethesdensis Allophanate Hydrolase Ap 1e-07
>pdb|3H0L|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab From Aquifex Aeolicus Length = 478 Back     alignment and structure 
Iteration: 1

 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 12/224 (5%)
Query: 8   ERFNLALEEAKQ-VDILLAASTKSVEEIG-RDTPLLGVPLTVKESVAVKGCSNNAGRIKP 65
           +R+N   E+ K  +  L   + K  E +  R+ PL G+P+ VK+++ V+G          
Sbjct: 30  DRYNQTEEKVKAYITPLYGKALKQAESLKERELPLFGIPIAVKDNILVEGEKTTCASKIL 89
Query: 66  KERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPXXXXX 125
           +  +A  DA  +  L++AGA+I+  TN  E  M   T   A   T NP+D  R P     
Sbjct: 90  ENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSG 149
Query: 126 XXXXXXXXXXXIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVG--HMPSSEDKMWNT 183
                       V + SD  GS R PA F GV G KP+ G VS  G     SS D+    
Sbjct: 150 GSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQ---- 205
Query: 184 YFTIGLLARYAEDLPLVLHLMIS-DREQAKSLRLLEPVIVQDIK 226
              IG+  R  ED+ LVL ++   D + + S ++  P   +++K
Sbjct: 206 ---IGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVPEWSEEVK 246
>pdb|2DC0|A Chain A, Crystal Structure Of Amidase Length = 434 Back     alignment and structure
>pdb|3KFU|E Chain E, Crystal Structure Of The Transamidosome Length = 471 Back     alignment and structure
>pdb|3AL0|A Chain A, Crystal Structure Of The Glutamine Transamidosome From Thermotoga Maritima In The Glutamylation State Length = 475 Back     alignment and structure
>pdb|3A1K|A Chain A, Crystal Structure Of Rhodococcus Sp. N771 Amidase Length = 521 Back     alignment and structure
>pdb|3A1I|A Chain A, Crystal Structure Of Rhodococcus Sp. N-771 Amidase Complexed With Benzamide Length = 521 Back     alignment and structure
>pdb|1M21|A Chain A, Crystal Structure Analysis Of The Peptide Amidase Pam In Complex With The Competitive Inhibitor Chymostatin Length = 503 Back     alignment and structure
>pdb|3A2P|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Length = 493 Back     alignment and structure
>pdb|3A2Q|A Chain A, Structure Of 6-Aminohexanoate Cyclic Dimer Hydrolase Complexed With Substrate Length = 493 Back     alignment and structure
>pdb|2GI3|A Chain A, Crystal Structure Of Glutamyl-Trna(Gln) Amidotransferase Subunit A (Tm1272) From Thermotoga Maritima At 1.80 A Resolution Length = 476 Back     alignment and structure
>pdb|2DF4|A Chain A, Structure Of Trna-Dependent Amidotransferase Gatcab Complexed With Mn2+ Length = 485 Back     alignment and structure
>pdb|1MT5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Length = 537 Back     alignment and structure
>pdb|2VYA|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase Conjugated With The Drug-Like Inhibitor Pf-750 Length = 587 Back     alignment and structure
>pdb|2WAP|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With The Drug-Like Urea Inhibitor Pf-3845 Length = 543 Back     alignment and structure
>pdb|4DO3|A Chain A, Structure Of Faah With A Non-steroidal Anti-inflammatory Drug Length = 571 Back     alignment and structure
>pdb|4HBP|A Chain A, Crystal Structure Of Faah In Complex With Inhibitor Length = 550 Back     alignment and structure
>pdb|3QK5|A Chain A, Crystal Structure Of Fatty Acid Amide Hydrolase With Small Molecule Inhibitor Length = 587 Back     alignment and structure
>pdb|2WJ1|A Chain A, 3d-Crystal Structure Of Humanized-Rat Fatty Acid Amide Hydrolase (Faah) Conjugated With 7-Phenyl-1-(4-(Pyridin-2- Yl)oxazol-2-Yl)heptan-1-One, An Alpha-Ketooxazole Length = 573 Back     alignment and structure
>pdb|4GYR|A Chain A, Granulibacter Bethesdensis Allophanate Hydrolase Apo Length = 621 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 5e-79
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 3e-54
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 1e-39
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 3e-36
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 6e-36
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 1e-34
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 1e-33
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 5e-33
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 2e-31
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 5e-30
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Length = 573 Back     alignment and structure
 Score =  249 bits (638), Expect = 5e-79
 Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 29/295 (9%)

Query: 2   LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAG 61
            N V     +   + ++                 R   L GVP+++KE  + KG  +  G
Sbjct: 105 TNCVTSYLTDCETQLSQ---------------APRQGLLYGVPVSLKECFSYKGHDSTLG 149

Query: 62  RIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPG 121
               +   +  D   V++L+  GA+    TN P+   +++  N   G T NP+ + ++PG
Sbjct: 150 LSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSSKSPG 209

Query: 122 GSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMW 181
           GSSGGE AL+ SG S +G+ +DI GS R P+ F G+ G KP+   +S  G          
Sbjct: 210 GSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCV-YGQT 268

Query: 182 NTYFTIGLLARYAEDLPLVLHLMISDREQAK-------SLRLLEPVIVQDIKVFYMEDDG 234
               ++G +AR  E L L L  ++ +              R       + ++V Y E D 
Sbjct: 269 AVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDN 328

Query: 235 SCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELVSMVLLKMNG 288
                      ++  + +    LE   G         ++    E++S   L  +G
Sbjct: 329 YTM----PSPAMRRALIETKQRLE-AAGHTLIPFLPNNIPYALEVLSTGGLFSDG 378
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Length = 493 Back     alignment and structure
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Length = 434 Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Length = 414 Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Length = 521 Back     alignment and structure
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Length = 485 Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Length = 478 Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Length = 503 Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Length = 471 Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Length = 476 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
3ip4_A 485 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
2dc0_A 434 Probable amidase; structural genomics, NPPSFA, nat 100.0
3h0l_A 478 Glutamyl-tRNA(Gln) amidotransferase subunit A; mul 100.0
1m22_A 503 Peptide amidase, PAM; eleven-stranded beta sheet, 100.0
3kfu_E 471 Glutamyl-tRNA(Gln) amidotransferase subunit A; ASP 100.0
3a2q_A 493 6-aminohexanoate-cyclic-dimer hydrolase; alpha/bet 100.0
2gi3_A 476 Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1 100.0
3ppm_A 573 Fatty-acid amide hydrolase 1; protein-inhibitor co 100.0
3a1k_A 521 Amidase; AS family enzyme, hydrolase; 2.17A {Rhodo 100.0
1o9p_A 414 Malonamidase E2; malonate; 1.8A {Bradyrhizobium ja 100.0
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A Back     alignment and structure
Probab=100.00  E-value=4.4e-73  Score=558.19  Aligned_cols=259  Identities=25%  Similarity=0.369  Sum_probs=235.6

Q ss_pred             eeEEEecCHHHHHHHHHHHhHHH-HcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHH
Q psy15831          2 LNAVVDERFNLALEEAKQVDILL-AASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLL   80 (304)
Q Consensus         2 lna~~~~~~~~al~~A~~~d~~~-~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L   80 (304)
                      +||+++.++|+|+++|+++|+++ ++|+       . +|||||||+|||+|+++|++||+||..+.++++.+|+++|++|
T Consensus        40 lna~~~~~~~~Al~~A~~~d~~~~~~g~-------~-gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~dA~vV~rL  111 (485)
T 3ip4_A           40 IKSFLALDKENAIKKAQELDELQAKDQM-------D-GKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKL  111 (485)
T ss_dssp             HCCEEEECHHHHHHHHHHHHHHHHTTCC-------C-STTTTCEEEEETTBCBTTBCCCTTSGGGTTCCCSSCCHHHHHH
T ss_pred             ceEEEEECHHHHHHHHHHHHHHHHhcCC-------C-CCcCCCEEEEEcCcccCCCccCCCChhhcCCCCCCCcHHHHHH
Confidence            79999999999999999999988 6664       3 8999999999999999999999999999999999999999999


Q ss_pred             HHcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceee
Q psy15831         81 RQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGH  160 (304)
Q Consensus        81 ~~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~gl  160 (304)
                      +++|||++||||||||+++.++.|++||+|+||||+.|+|||||||||++||+|++++++|||+|||||+||+|||||||
T Consensus       112 r~AGAii~GKTn~~Efa~~~~t~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~Gl  191 (485)
T 3ip4_A          112 HKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGM  191 (485)
T ss_dssp             HHTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEE
T ss_pred             HHCCCEEEEecCCcccccCCCCCCCCCCCcCCccccCcCCCCCccHHHHHhhcCCCceeeeccCCcchhhhHHHhCCeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCCc---------cccCCcEEEEEC
Q psy15831        161 KPSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEP---------VIVQDIKVFYME  231 (304)
Q Consensus       161 kPT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~~---------~~~~~lrig~~~  231 (304)
                      |||+|+||+.|++|.++     ++|++|||+|||+|+++++++|.+.| ..++.....+         ...+++||||+.
T Consensus       192 KPT~Grvs~~G~~p~~~-----sld~~Gp~aRsv~D~a~~l~vl~g~d-~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~  265 (485)
T 3ip4_A          192 KPTYGRVSRFGLVAFAS-----SLDQIGPLTRNVKDNAIVLEAISGAD-VNDSTSAPVDDVDFTSEIGKDIKGLKVALPK  265 (485)
T ss_dssp             ECCTTSBCCTTBCCSCT-----TTCCEEEEESSHHHHHHHHHHHBSCC-TTCTTSCCCCCCCCSTTTTCCCTTCEEEEEG
T ss_pred             cCCCCcccCCCCCCccc-----ccceeccccCCHHHHHHHHHHhcCCC-cccccccccCccchhhhhccCccCcEEEEEC
Confidence            99999999999999987     99999999999999999999999963 3333222111         146789999998


Q ss_pred             CCCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHHH
Q psy15831        232 DDGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFELV  279 (304)
Q Consensus       232 ~~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~~  279 (304)
                      +.    +...++|+++++++++++.|++ +||+|+++++ .+++...+|
T Consensus       266 ~~----~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~~p~~~~~~~~~  309 (485)
T 3ip4_A          266 EY----LGEGVADDVKEAVQNAVETLKS-LGAVVEEVSLPNTKFGIPSY  309 (485)
T ss_dssp             GG----GSTTSCHHHHHHHHHHHHHHHH-TTCEEEEECCTTGGGHHHHH
T ss_pred             Cc----ccCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCcHHHHHHHH
Confidence            63    2356899999999999999999 5999999998 666666555
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus} Back     alignment and structure
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A* Back     alignment and structure
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A* Back     alignment and structure
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus} Back     alignment and structure
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A Back     alignment and structure
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A* Back     alignment and structure
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A* Back     alignment and structure
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A Back     alignment and structure
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 304
d2f2aa1 485 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransf 1e-36
d2gi3a1 475 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransf 3e-32
d1mt5a_ 537 c.117.1.1 (A:) Fatty acid amide hydrolase (oleamid 9e-20
d1m22a_ 490 c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomon 2e-19
d1ocka_ 412 c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium jap 9e-09
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Length = 485 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

 Score =  134 bits (338), Expect = 1e-36
 Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 27/286 (9%)

Query: 2   LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAG 61
           + + +      A+++A+++D L A           D  L G+P+ +K+++   G      
Sbjct: 40  IKSFLALDKENAIKKAQELDELQAKDQ-------MDGKLFGIPMGIKDNIITNGLETTCA 92

Query: 62  RIKPKERIATDDAETVRLLRQAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPG 121
               +  +   ++  +  L +  A+++   N  E  M   T       T NP+D +  PG
Sbjct: 93  SKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPG 152

Query: 122 GSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHKPSPGFVSNVGHMPSSEDKMW 181
           GSSGG AA +++G   + + SD  GS R PA + GV G KP+ G VS  G +        
Sbjct: 153 GSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVA-----FA 207

Query: 182 NTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLEPVI--------VQDIKVFYMEDD 233
           ++   IG L R  +D  +VL  +        +   ++ V         ++ +KV   ++ 
Sbjct: 208 SSLDQIGPLTRNVKDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEY 267

Query: 234 GSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNIDLEDVFELV 279
                 +GV  D+KE ++ AV  L+   G  A    + L +    +
Sbjct: 268 L----GEGVADDVKEAVQNAVETLK-SLG--AVVEEVSLPNTKFGI 306
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Length = 475 Back     information, alignment and structure
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 537 Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Length = 490 Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Length = 412 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
d2f2aa1 485 Glutamyl-tRNA(Gln) amidotransferase subunit A {Sta 100.0
d1mt5a_ 537 Fatty acid amide hydrolase (oleamide hydrolase) {R 100.0
d2gi3a1 475 Glutamyl-tRNA(Gln) amidotransferase subunit A {The 100.0
d1m22a_ 490 Peptide amidase Pam {Stenotrophomonas maltophilia 100.0
d1ocka_ 412 Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 100.0
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Amidase signature (AS) enzymes
superfamily: Amidase signature (AS) enzymes
family: Amidase signature (AS) enzymes
domain: Glutamyl-tRNA(Gln) amidotransferase subunit A
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.9e-70  Score=535.07  Aligned_cols=259  Identities=26%  Similarity=0.372  Sum_probs=236.3

Q ss_pred             eeEEEecCHHHHHHHHHHHhHHHHcCCCcccccCCCCCcccceEEeecCCCCCCccCCCCCCCCCCCCCCcchHHHHHHH
Q psy15831          2 LNAVVDERFNLALEEAKQVDILLAASTKSVEEIGRDTPLLGVPLTVKESVAVKGCSNNAGRIKPKERIATDDAETVRLLR   81 (304)
Q Consensus         2 lna~~~~~~~~al~~A~~~d~~~~~~~~~~~~~~~~~pL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~da~~V~~L~   81 (304)
                      +||+++.++|+|+++|+++|+++++++       .++||+||||+|||+|+++|++||+||..+.++.+.+|+++|++|+
T Consensus        40 lna~~~~~~~~a~~~A~~~d~~~~~~~-------~~gpL~GiPi~vKD~~~v~g~~tt~Gs~~~~~~~~~~d~~~v~~l~  112 (485)
T d2f2aa1          40 IKSFLALDKENAIKKAQELDELQAKDQ-------MDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLH  112 (485)
T ss_dssp             HCCEEEECHHHHHHHHHHHHHHHHTTC-------CCSTTTTCEEEEETTBCBTTBCCCTTCGGGTTCCCSSCCHHHHHHH
T ss_pred             ccEEEEeCHHHHHHHHHHHHHHHHCCC-------CCCCcCcCeEEEEcccccCCCccCCcChhhccCCcccccccccccc
Confidence            799999999999999999999998885       3699999999999999999999999999999999999999999999


Q ss_pred             HcCCeEEEEcCcCccccccCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCcceeEeccCCCcccccccccCceeec
Q psy15831         82 QAGAIILCVTNTPELCMNWETFNKATGTTNNPYDTRRTPGGSSGGEAALLSSGASIVGVASDIAGSCRIPAMFTGVFGHK  161 (304)
Q Consensus        82 ~aGai~igkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsaaavaag~~~~alGtD~gGSiR~PAa~~Gv~glk  161 (304)
                      ++|||++|||||+||+++.++.|..||+++||||+.++|||||||||++||+|++++|+|||+|||||+||+||||||||
T Consensus       113 ~~Gai~~gkt~~~e~~~~~~~~n~~~g~~~NP~~~~~~~GGSSgGsaaavA~g~~~~alGtDt~GSiR~PAa~~Gl~G~k  192 (485)
T d2f2aa1         113 KENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMK  192 (485)
T ss_dssp             HTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBTTBCCCSSSHHHHHHHHTTSCSCEEEECSSSTTHHHHHHTTCEEEE
T ss_pred             ccccccccccchhhhcccccccCccccCcCCCCCcccccCCccccchhhHHhccCceEEecCCCchhhhhHHHhCceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCccCCCCceeeccccCCcchHHHHHHHHcCCCccccccccCC---------ccccCCcEEEEECC
Q psy15831        162 PSPGFVSNVGHMPSSEDKMWNTYFTIGLLARYAEDLPLVLHLMISDREQAKSLRLLE---------PVIVQDIKVFYMED  232 (304)
Q Consensus       162 PT~g~vs~~G~~p~~~~~~~~~~~~~G~~arsv~Dl~~~~~~l~~~~~~~~~~~~~~---------~~~~~~lrig~~~~  232 (304)
                      ||+|+||+.|++|.++     ++|++|||||+|+|+++++++|.+. +..++.+...         ..+.+++||||+.+
T Consensus       193 Pt~G~is~~g~~~~~~-----~~d~~Gpmar~v~D~~~ll~~~~g~-~~~d~~~~~~~~~~~~~~~~~~~~~lrig~~~~  266 (485)
T d2f2aa1         193 PTYGRVSRFGLVAFAS-----SLDQIGPLTRNVKDNAIVLEAISGA-DVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKE  266 (485)
T ss_dssp             CCTTSBCCTTBCCSCT-----TTCCEEEEESSHHHHHHHHHHHBSC-BTTBTTSCCCCCCCCSTTTTCCCTTCEEEEEGG
T ss_pred             CCCCCCCCCCCCCCcc-----cCCeeccccCCHHHHHHHHhhcccc-cccccccCCCCccchhhhhcCCccCCEEEEEcc
Confidence            9999999999999998     9999999999999999999999996 3333322211         12468899999987


Q ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecC-ChHHHHHH
Q psy15831        233 DGSCTLTDGVDLDIKEGIRKAVHHLEYKQGIKAQKVNI-DLEDVFEL  278 (304)
Q Consensus       233 ~g~~~~~~~~~~~v~~a~~~a~~~L~~~lG~~v~~~~~-~~~~~~~~  278 (304)
                      +.    ...++++++++++++++.|++ +|++|+++++ ++......
T Consensus       267 ~~----~~~~~~~i~~a~~~a~~~L~~-~G~~v~ev~lp~~~~~~~~  308 (485)
T d2f2aa1         267 YL----GEGVADDVKEAVQNAVETLKS-LGAVVEEVSLPNTKFGIPS  308 (485)
T ss_dssp             GG----STTSCHHHHHHHHHHHHHHHH-TTCEEEEECCTTGGGHHHH
T ss_pred             cc----cCcCCHHHHHHHHHHHHHHHH-CCCEEEEeCCCchhhhHHH
Confidence            43    567899999999999999999 5999999998 55444443
>d1mt5a_ c.117.1.1 (A:) Fatty acid amide hydrolase (oleamide hydrolase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2gi3a1 c.117.1.1 (A:1-475) Glutamyl-tRNA(Gln) amidotransferase subunit A {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m22a_ c.117.1.1 (A:) Peptide amidase Pam {Stenotrophomonas maltophilia [TaxId: 40324]} Back     information, alignment and structure
>d1ocka_ c.117.1.1 (A:) Malonamidase E2 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure