Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value
Query 93
pfam12330 99
pfam12330, DUF3635, Domain of unknown function (DU
1e-11
COG5072 488
COG5072, ALK1, Serine/threonine kinase of the hasp
3e-11
>gnl|CDD|204885 pfam12330, DUF3635, Domain of unknown function (DUF3635)
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Score = 55.3 bits (133), Expect = 1e-11
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 37 EELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNALDIDGLIESSQLLD 85
E+LF G+GDYQF++YR+MRK+ +N W F P N L + L +LLD
Sbjct: 1 EDLFNGKGDYQFEIYRLMRKELKNRWSEFEPYTNVLWLHYLS--DKLLD 47
This family may be a potential Haspin-related leucine-zipper. A leucine zipper was proposed to be present towards the C-terminus of human Haspin, (up-stream of the current family); however, as this domain would appear to span several helices and be largely within a loop structure, the actual zipper might be further downstream, and be this family, which is the very C-terminal part of the Sch. pombe sequence. Length = 99
>gnl|CDD|227404 COG5072, ALK1, Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
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Score = 57.2 bits (138), Expect = 3e-11
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 16 NFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNALDID 75
+F +SR + I Y+ +LF G DYQF++YR+MR+ + W F P N L +
Sbjct: 364 DFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPITNVLWLY 423
Query: 76 GLIES 80
L
Sbjct: 424 YLSHQ 428
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
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Probab=99.96 E-value=1.1e-30 Score=214.05 Aligned_cols=80 Identities=33% Similarity=0.573 Sum_probs=73.2
Q ss_pred cCCeEEEEeccccccccCCceEEecCCCCccccccCCchhhHHHHHHHHhhcCCCCCCCchhHHHHHHHHHhhhhhhhcc
Q psy15902 8 RTQHFQVENFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNALDIDGLIESSQLLDVD 87 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~~~f~dL~~d~~~F~G~gD~QfdiYr~MR~~~~~~W~~f~P~TNvlWL~YL~~~l~Ll~~k 87 (93)
..++||||||+|||+..++++++++..+||.||+|.+||||||||.||.+++++|+.|+|.|||||||||.+ +||.++
T Consensus 356 d~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~l~~g~wa~F~P~TNvlWL~yLs~--~llkk~ 433 (488)
T COG5072 356 DEGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPITNVLWLYYLSH--QLLKKK 433 (488)
T ss_pred ecCceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHHHhcCcHHhcccchhhHHHHHHHH--HHHhhc
Confidence 389999999999999999988877777899999999999999999999999999999999999999999999 666555
Q ss_pred CC
Q psy15902 88 GL 89 (93)
Q Consensus 88 gl 89 (93)
-+
T Consensus 434 ~~ 435 (488)
T COG5072 434 NL 435 (488)
T ss_pred cc
Confidence 43
>PF12330 DUF3635: Domain of unknown function (DUF3635); InterPro: IPR024604 This domain may be a potential Haspin-related leucine-zipper
Back Show alignment and domain information
Probab=99.95 E-value=2.6e-28 Score=165.55 Aligned_cols=53 Identities=51% Similarity=0.923 Sum_probs=43.1
Q ss_pred ccccccCCchhhHHHHHHHHhhcCCCCCCCchhHHHHHHHHHhhhhhhhccCCcc
Q psy15902 37 EELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNALDIDGLIESSQLLDVDGLIE 91 (93)
Q Consensus 37 ~~~F~G~gD~QfdiYr~MR~~~~~~W~~f~P~TNvlWL~YL~~~l~Ll~~kgl~~ 91 (93)
++||+|+|||||||||+||++++++|+.|+|+|||||||||++ +|+.+++.+.
T Consensus 1 ~~~F~g~gD~QfdiYr~Mr~~~~~~W~~f~P~TNvlWL~YL~~--kLl~~~~~~~ 53 (98)
T PF12330_consen 1 EELFEGRGDYQFDIYRLMRSLTKNDWSEFEPKTNVLWLHYLAD--KLLDKKKYKK 53 (98)
T ss_dssp SGGGS--SSHHHHHHHHHHHHHTT-TTS--THHHHHHHHHHHH--HHHHS--BSS
T ss_pred CccccCCCccHHHHHHHHHHHhhCcchhcCCHHHHHHHHHHHH--HHHHHccCCC
Confidence 5899999999999999999999999999999999999999999 8887777654
A leucine zipper was proposed to be present towards the C terminus of human Haspin, (up-stream of the current family) []; however, as this domain would appear to span several helices and be largely within a loop structure [], the actual zipper might be further downstream, and be represented by this entry, which is the very C-terminal part of the Schizosaccharomyces pombe sequence.; PDB: 2WB8_A 3F2N_A 3FMD_A 3DLZ_A 2VUW_A 3IQ7_A 3E7V_A.
>KOG2464|consensus
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Probab=97.95 E-value=2.8e-06 Score=64.31 Aligned_cols=73 Identities=23% Similarity=0.344 Sum_probs=63.9
Q ss_pred ecccCCeEEEEeccccccccCCceEEecCCCCccccccCCchhhHHHHHHHHhhcCCCCCCCchhHHHHHHHHHh
Q psy15902 5 TDIRTQHFQVENFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNALDIDGLIE 79 (93)
Q Consensus 5 ~~~~g~~vTIIDftLSR~~~~~~~~f~dL~~d~~~F~G~gD~QfdiYr~MR~~~~~~W~~f~P~TNvlWL~YL~~ 79 (93)
-|++.++|=|-..+ |...+....+.+..++...+.+.++.|+|+|+.|+......|..|.|.+|+.|++|+.+
T Consensus 162 rdl~~gnili~k~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (246)
T KOG2464|consen 162 RDLHLGNILIKKTG--RLLIPLIKDSINLKDDAKKIKGNGNGVFDIYRLMFVKFDMSASLFKPADNLLWLDYLSD 234 (246)
T ss_pred cccCcCcEEEeccc--ccccccceeEecchhhhhhhcccceeEEEEeeecccccCcceeccccchhHHHHHHhhc
Confidence 46667777666666 66667778888888899999999999999999999999999999999999999999998
>KOG0192|consensus
Back Show alignment and domain information
Probab=89.41 E-value=0.24 Score=39.91 Aligned_cols=49 Identities=27% Similarity=0.417 Sum_probs=32.6
Q ss_pred ceecccCCeEEEEeccccccccCCc---e----EEecCCCCccccccC---CchhhHHHHH
Q psy15902 3 ALTDIRTQHFQVENFTISRCFVGEK---I----CYYDLSQDEELFEGE---GDYQFDMYRM 53 (93)
Q Consensus 3 ~~~~~~g~~vTIIDftLSR~~~~~~---~----~f~dL~~d~~~F~G~---gD~QfdiYr~ 53 (93)
.|++-++..+.|+|||+||...... . -+.=. =||+|+++ -+-.-|||--
T Consensus 174 iLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wM--APEv~~~~~~~~~~K~DvySF 232 (362)
T KOG0192|consen 174 ILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWM--APEVLRGEKSPYTEKSDVYSF 232 (362)
T ss_pred EEEcCCCCEEEECCCccceeeccccccccCCCCCcccc--ChhhhcCCCCcCCccchhhhH
Confidence 3566667899999999999887421 0 11112 58999964 4566666653
>KOG0593|consensus
Back Show alignment and domain information
Probab=80.04 E-value=0.66 Score=38.56 Aligned_cols=26 Identities=15% Similarity=0.234 Sum_probs=18.9
Q ss_pred ccCCeEEEEeccccccccCCceEEec
Q psy15902 7 IRTQHFQVENFTISRCFVGEKICYYD 32 (93)
Q Consensus 7 ~~g~~vTIIDftLSR~~~~~~~~f~d 32 (93)
++++.|.|||||+.|.-.+.+-.|+|
T Consensus 135 t~~gvvKLCDFGFAR~L~~pgd~YTD 160 (396)
T KOG0593|consen 135 TQNGVVKLCDFGFARTLSAPGDNYTD 160 (396)
T ss_pred ecCCcEEeccchhhHhhcCCcchhhh
Confidence 46788999999999987744334443
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability
Query 93
d1t4ha_ 270
Protein kinase wnk1 {Human (Homo sapiens) [TaxId:
93.15
d1uwha_ 276
B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
89.41
d1mqba_ 283
epha2 receptor tyrosine kinase {Human (Homo sapien
88.6
d1a06a_ 307
Calmodulin-dependent protein kinase {Rat (Rattus n
88.21
d1fota_ 316
cAMP-dependent PK, catalytic subunit {Baker's yeas
86.33
d1xwsa_ 273
Proto-oncogene serine/threonine-protein kinase Pim
85.85
d1koba_ 352
Twitchin, kinase domain {California sea hare (Aply
82.45
d1rdqe_ 350
cAMP-dependent PK, catalytic subunit {Mouse (Mus m
81.97
d1u59a_ 285
Tyrosine-protein kinase ZAP-70 {Human (Homo sapien
81.61
d1qpca_ 272
Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax
81.33
d1opja_ 287
Abelsone tyrosine kinase (abl) {Mouse (Mus musculu
80.93
d1rjba_ 325
Fl cytokine receptor {Human (Homo sapiens) [TaxId:
80.8
d2j4za1 263
Aurora-related kinase 1 (aurora-2) {Human (Homo sa
80.5
d3bqca1 328
Protein kinase CK2, alpha subunit {Rattus norvegic
80.11
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.15 E-value=0.031 Score=38.98 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=32.6
Q ss_pred eecccCCeEEEEeccccccccCCce---EEecCCCCccccccCCchhhHHHHH
Q psy15902 4 LTDIRTQHFQVENFTISRCFVGEKI---CYYDLSQDEELFEGEGDYQFDMYRM 53 (93)
Q Consensus 4 ~~~~~g~~vTIIDftLSR~~~~~~~---~f~dL~~d~~~F~G~gD~QfdiYr~ 53 (93)
+++-...+|.|||||+|+....... +-+-.---||++++.-+..-|||-.
T Consensus 146 Ll~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSl 198 (270)
T d1t4ha_ 146 FITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAF 198 (270)
T ss_dssp EESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHH
T ss_pred eeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCCCCCCcCchhhH
Confidence 4443457899999999997654321 1111112699999877777787764
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.41 E-value=0.049 Score=37.96 Aligned_cols=46 Identities=13% Similarity=0.205 Sum_probs=25.9
Q ss_pred cCCeEEEEeccccccccCCc--eEEec-----CCCCccccccCC----chhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEK--ICYYD-----LSQDEELFEGEG----DYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~--~~f~d-----L~~d~~~F~G~g----D~QfdiYr~ 53 (93)
.+.++.|+|||+|+...... ..... .---||+|.+.. +.+-|||-.
T Consensus 139 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~ 195 (276)
T d1uwha_ 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195 (276)
T ss_dssp TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHH
T ss_pred CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhh
Confidence 45789999999998764211 11111 112588887642 556788764
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.60 E-value=0.079 Score=36.63 Aligned_cols=49 Identities=16% Similarity=0.162 Sum_probs=25.2
Q ss_pred eecccCCeEEEEeccccccccCCc-eEEe-------cCCCCccccccC-CchhhHHHHH
Q psy15902 4 LTDIRTQHFQVENFTISRCFVGEK-ICYY-------DLSQDEELFEGE-GDYQFDMYRM 53 (93)
Q Consensus 4 ~~~~~g~~vTIIDftLSR~~~~~~-~~f~-------dL~~d~~~F~G~-gD~QfdiYr~ 53 (93)
+++ ++..|.|+|||+||.-.+.. ..++ -.=--||.++++ -+..-|||-.
T Consensus 142 Ll~-~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~ 199 (283)
T d1mqba_ 142 LVN-SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199 (283)
T ss_dssp EEC-TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHH
T ss_pred EEC-CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCccccccc
Confidence 444 45689999999999754321 1111 001268888763 5677788765
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.21 E-value=0.098 Score=36.98 Aligned_cols=46 Identities=11% Similarity=0.149 Sum_probs=23.2
Q ss_pred cCCeEEEEeccccccccCCc----eEEecCCCCccccccCC-chhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEK----ICYYDLSQDEELFEGEG-DYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~----~~f~dL~~d~~~F~G~g-D~QfdiYr~ 53 (93)
.+.+|.|||||+|+....+. .+-+-.---||++.|.. +..-|||-.
T Consensus 145 ~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSl 195 (307)
T d1a06a_ 145 EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 195 (307)
T ss_dssp TTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHH
T ss_pred CCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhh
Confidence 35789999999999765432 12232233699998864 778888753
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.33 E-value=0.16 Score=35.90 Aligned_cols=46 Identities=11% Similarity=0.241 Sum_probs=29.7
Q ss_pred cCCeEEEEeccccccccCCce--EEecCCCCccccccCC-chhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEKI--CYYDLSQDEELFEGEG-DYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~~--~f~dL~~d~~~F~G~g-D~QfdiYr~ 53 (93)
+.++|.|+|||+|+...+... +-+---.-||++.|++ +..-|||-.
T Consensus 139 ~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSl 187 (316)
T d1fota_ 139 KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSF 187 (316)
T ss_dssp TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHH
T ss_pred CCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhcccc
Confidence 356899999999997654321 1111112689998863 677787643
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.85 E-value=0.1 Score=35.87 Aligned_cols=51 Identities=8% Similarity=0.066 Sum_probs=31.7
Q ss_pred ceecccCCeEEEEeccccccccCCc---eEEecCCCCccccccCC--chhhHHHHH
Q psy15902 3 ALTDIRTQHFQVENFTISRCFVGEK---ICYYDLSQDEELFEGEG--DYQFDMYRM 53 (93)
Q Consensus 3 ~~~~~~g~~vTIIDftLSR~~~~~~---~~f~dL~~d~~~F~G~g--D~QfdiYr~ 53 (93)
.+++-++..|.|||||+|+...... .+-+..-.-||++.++. +..-|||-.
T Consensus 141 Ill~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSl 196 (273)
T d1xwsa_ 141 ILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196 (273)
T ss_dssp EEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHH
T ss_pred eEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccc
Confidence 3566667899999999998655321 11122222588888754 244677753
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=82.45 E-value=0.42 Score=34.33 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=27.5
Q ss_pred cCCeEEEEeccccccccCCceEEe----cCCCCccccccCC-chhhHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEKICYY----DLSQDEELFEGEG-DYQFDMYR 52 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~~~f~----dL~~d~~~F~G~g-D~QfdiYr 52 (93)
...+|.|||||+|+.-..+....+ -.---||++.|+. +..-|||-
T Consensus 164 ~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 213 (352)
T d1koba_ 164 KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 213 (352)
T ss_dssp TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHH
T ss_pred CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHH
Confidence 457899999999987654332211 1112577777753 56666654
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.97 E-value=0.31 Score=34.94 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=27.4
Q ss_pred CCeEEEEeccccccccCCc--eEEecCCCCccccccCC-chhhHHHH
Q psy15902 9 TQHFQVENFTISRCFVGEK--ICYYDLSQDEELFEGEG-DYQFDMYR 52 (93)
Q Consensus 9 g~~vTIIDftLSR~~~~~~--~~f~dL~~d~~~F~G~g-D~QfdiYr 52 (93)
..+|.|||||+||...+.. ..-+---.-||++.|++ +..-|||-
T Consensus 177 ~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwS 223 (350)
T d1rdqe_ 177 QGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWA 223 (350)
T ss_dssp TSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHH
T ss_pred CCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccc
Confidence 4589999999999765432 12222122688888753 45556654
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.61 E-value=0.32 Score=33.84 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=27.8
Q ss_pred cCCeEEEEeccccccccCCceEEecC--------CCCccccccC-CchhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEKICYYDL--------SQDEELFEGE-GDYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~~~f~dL--------~~d~~~F~G~-gD~QfdiYr~ 53 (93)
+..+|.|+|||+||.-.......... ---||++++. -+..-|||-.
T Consensus 144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~ 198 (285)
T d1u59a_ 144 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 198 (285)
T ss_dssp ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHH
T ss_pred cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcc
Confidence 46789999999999654332111110 1157777753 4667777754
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.33 E-value=0.28 Score=33.61 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=28.7
Q ss_pred cCCeEEEEeccccccccCCce------EEecCCCCcccccc-CCchhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEKI------CYYDLSQDEELFEG-EGDYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~~------~f~dL~~d~~~F~G-~gD~QfdiYr~ 53 (93)
+..++.|+|||+||.-.++.. ..+-.-.-||++.+ .-+..-|||-.
T Consensus 144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~ 196 (272)
T d1qpca_ 144 DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196 (272)
T ss_dssp TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHH
T ss_pred cccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhh
Confidence 457899999999997653321 11111125787775 34667787754
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=80.93 E-value=0.35 Score=33.50 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=28.2
Q ss_pred cCCeEEEEeccccccccCCc------eEEecCCCCccccccC-CchhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEK------ICYYDLSQDEELFEGE-GDYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~------~~f~dL~~d~~~F~G~-gD~QfdiYr~ 53 (93)
+..+|.|+|||+||...++. +..+-.-.-|+.+.+. -+..-|||-.
T Consensus 150 ~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~ 202 (287)
T d1opja_ 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202 (287)
T ss_dssp GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHH
T ss_pred CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhH
Confidence 34689999999999765432 1111111257777653 4567777754
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.80 E-value=0.42 Score=33.51 Aligned_cols=46 Identities=9% Similarity=0.036 Sum_probs=28.7
Q ss_pred cCCeEEEEeccccccccCC-------ceEEecCCCCcccccc-CCchhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~-------~~~f~dL~~d~~~F~G-~gD~QfdiYr~ 53 (93)
++.+|.|+|||+||..... ....+-.---||++.+ .-+..-|||-.
T Consensus 199 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~ 252 (325)
T d1rjba_ 199 HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 252 (325)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccch
Confidence 5678999999999875532 1122221225776664 45677787764
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.50 E-value=0.31 Score=33.52 Aligned_cols=46 Identities=17% Similarity=0.283 Sum_probs=29.3
Q ss_pred cCCeEEEEeccccccccCCc---eEEecCCCCccccccCC-chhhHHHHH
Q psy15902 8 RTQHFQVENFTISRCFVGEK---ICYYDLSQDEELFEGEG-DYQFDMYRM 53 (93)
Q Consensus 8 ~g~~vTIIDftLSR~~~~~~---~~f~dL~~d~~~F~G~g-D~QfdiYr~ 53 (93)
+..++.|+|||+|+...++. ..-+---.-||++.|.. +..-|||-.
T Consensus 141 ~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSl 190 (263)
T d2j4za1 141 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 190 (263)
T ss_dssp TTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred CCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhH
Confidence 45689999999998655432 11121123688998864 567777654
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]
Probab=80.11 E-value=0.32 Score=33.70 Aligned_cols=51 Identities=14% Similarity=0.302 Sum_probs=32.1
Q ss_pred ceecccCCeEEEEeccccccccCCc----eEEecCCCCccccccCC--chhhHHHHH
Q psy15902 3 ALTDIRTQHFQVENFTISRCFVGEK----ICYYDLSQDEELFEGEG--DYQFDMYRM 53 (93)
Q Consensus 3 ~~~~~~g~~vTIIDftLSR~~~~~~----~~f~dL~~d~~~F~G~g--D~QfdiYr~ 53 (93)
.+++-.+..|.|||||+|+....+. .+-+..-.-||.+.+.. ++.-||+-.
T Consensus 160 ILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 216 (328)
T d3bqca1 160 VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 216 (328)
T ss_dssp EEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred eEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhh
Confidence 3566677889999999999655321 12222223677777642 566677654