Psyllid ID: psy16001

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MVDNSQTEIHLVPICSSQDIDLESQANSLDHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccHcccccccccccccEccccccccEEEEccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccEEEcccccEEEEcccEccccccccccHHHHHHHHHHHHHHHHHHHHHccccEcEEEEEEcccccEEEEcccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mvdnsqteihlvpicssqdidlesqansldhfvpafklvdstngsngfcllgkdessnskghQMKVYANLFDflssnsgidhplceeCTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLnkfkstnvfnatfhiwhsghfgtinnfrlgtlpsapvdwseiNAAWGQTALLLTALARKLNLTFqryrivpygnhsyiedttehknlplfasggakffwdtKFDMAMVAFLDCLQQFKEELekgdsefhlpynmdskgkiedettgntySVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Flexible Loop (DISEMBL)
mvdnsqteiHLVPICSSQDIDLESQANSLDHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Low Complexity Region (SEG)
MVDNSQTEIHLVPICSSQDIDLESQANSLDHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTlelqlqyslsqlNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQtallltalarklnltFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Disordered region (IsUnstruct)
********IHLVPICSSQDIDLE*QANSLDHFVPAFKLVDSTNGSNGFCLLG***********MKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEEL************************GNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQ********
Disordered Region (DISOPRED)
****SQTEIHLVPICSSQDIDLESQANSLDHF**********************************************GIDHPLCE*CT*****MMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF*******
Disordered Region (DISEMBL)
********IHLVPICSSQDIDLESQANSLDHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Disordered Region (DISPRO)
********IH*******************DHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKN*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVDNSQTEIHLVPICSSQDIDLESQANSLDHFVPAFKLVDSTNGSNGFCLLGKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQFQDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	318	2.2.26 [Sep-21-2011]
Q9VCE1	422	Beclin-1-like protein OS=	yes	N/A	0.669	0.504	0.686	6e-87
Q91XJ1	448	Beclin-1 OS=Rattus norveg	yes	N/A	0.682	0.484	0.695	2e-86
Q14457	450	Beclin-1 OS=Homo sapiens	yes	N/A	0.682	0.482	0.690	4e-86
Q4A1L5	448	Beclin-1 OS=Sus scrofa GN	yes	N/A	0.682	0.484	0.690	6e-86
Q4A1L4	448	Beclin-1 OS=Bos taurus GN	yes	N/A	0.682	0.484	0.690	6e-86
Q5R878	450	Beclin-1 OS=Pongo abelii	yes	N/A	0.682	0.482	0.690	9e-86
Q5ZKS6	447	Beclin-1 OS=Gallus gallus	yes	N/A	0.682	0.485	0.695	1e-85
O88597	448	Beclin-1 OS=Mus musculus	yes	N/A	0.682	0.484	0.690	1e-85
Q6GP52	445	Beclin-1 OS=Xenopus laevi	N/A	N/A	0.682	0.487	0.695	1e-85
Q4A1L3	445	Beclin-1 OS=Xenopus tropi	yes	N/A	0.682	0.487	0.690	3e-85

>sp|Q9VCE1|BECN1_DROME Beclin-1-like protein OS=Drosophila melanogaster GN=Atg6 PE=2 SV=1

 Score =  321 bits (822), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 147/214 (68%), Positives = 176/214 (82%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    +++     D  ++LE Q+ YS  QL+K + TN+FN TFHIWH+GHFGTINNFRL
Sbjct: 207 REYTKHRRELMLTEDDKRSLECQIAYSKQQLDKLRDTNIFNITFHIWHAGHFGTINNFRL 266

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPS  VDWSEINAAWGQT LLL+ALARK+ LTF+RYR+VP+GNHSY+E   E++ LPL
Sbjct: 267 GRLPSVSVDWSEINAAWGQTVLLLSALARKIGLTFERYRVVPFGNHSYVEVLGENRELPL 326

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KFFWDTKFD AMVAFLDCL QF++E+EK D+EF LPY M+ KGKI D +TGN+Y
Sbjct: 327 YGSGGFKFFWDTKFDAAMVAFLDCLTQFQKEVEKRDTEFLLPYKME-KGKIIDPSTGNSY 385

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF
Sbjct: 386 SIKIQFNSEEQWTKALKFMLTNLKWGLAWVSSQF 419

Drosophila melanogaster (taxid: 7227)

>sp|Q91XJ1|BECN1_RAT Beclin-1 OS=Rattus norvegicus GN=Becn1 PE=1 SV=1

 Score =  319 bits (817), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 178/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPSAPV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 289 GRLPSAPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Rattus norvegicus (taxid: 10116)

>sp|Q14457|BECN1_HUMAN Beclin-1 OS=Homo sapiens GN=BECN1 PE=1 SV=2

 Score =  318 bits (814), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 178/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+ +QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 231 REYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 290

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 291 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 350

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 351 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 410

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 411 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 450

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense. Protects against infection by a neurovirulent strain of Sindbis virus.

Homo sapiens (taxid: 9606)

>sp|Q4A1L5|BECN1_PIG Beclin-1 OS=Sus scrofa GN=BECN1 PE=2 SV=1

 Score =  317 bits (813), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Sus scrofa (taxid: 9823)

>sp|Q4A1L4|BECN1_BOVIN Beclin-1 OS=Bos taurus GN=BECN1 PE=2 SV=1

 Score =  317 bits (813), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Bos taurus (taxid: 9913)

>sp|Q5R878|BECN1_PONAB Beclin-1 OS=Pongo abelii GN=BECN1 PE=2 SV=1

 Score =  317 bits (811), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 231 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 290

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 291 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 350

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 351 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 410

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 411 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 450

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Pongo abelii (taxid: 9601)

>sp|Q5ZKS6|BECN1_CHICK Beclin-1 OS=Gallus gallus GN=BECN1 PE=2 SV=1

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 228 KEYCEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 287

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 288 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 347

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 348 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 407

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 408 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 447

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Gallus gallus (taxid: 9031)

>sp|O88597|BECN1_MOUSE Beclin-1 OS=Mus musculus GN=Becn1 PE=1 SV=3

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 229 REYSEFKRQQLELDDELKSVENQVRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+  K LP
Sbjct: 289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct: 349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Mus musculus (taxid: 10090)

>sp|Q6GP52|BECN1_XENLA Beclin-1 OS=Xenopus laevis GN=becn1 PE=2 SV=1

 Score =  316 bits (810), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 226 KEYSEFKRQQLELDDDLKSVENQMRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 285

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR+VP+GNHSY+E  T+  K LP
Sbjct: 286 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLQFQRYRLVPFGNHSYLESLTDKSKELP 345

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKGD+ F LPY MD  KGKIED   +G
Sbjct: 346 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGDTGFCLPYRMDVDKGKIEDTGGSG 405

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 406 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 445

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Xenopus laevis (taxid: 8355)

>sp|Q4A1L3|BECN1_XENTR Beclin-1 OS=Xenopus tropicalis GN=becn1 PE=2 SV=1

 Score =  315 bits (807), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/220 (69%), Positives = 177/220 (80%), Gaps = 3/220 (1%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+   E  D LK++E Q++Y+  QL+K K TNVFNATFHIWHSG FGTINNFRL
Sbjct: 226 KEYSEFKRQQLELDDDLKSVENQMRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 285

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PV+W+EINAAWGQT LLL ALA K+ L FQRYR++P+GNHSY+E  T+  K LP
Sbjct: 286 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLQFQRYRLMPFGNHSYLESLTDKSKELP 345

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTG 274
           L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKGD+ F LPY MD  KGKIED   +G
Sbjct: 346 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGDTGFCLPYRMDVEKGKIEDTGGSG 405

Query: 275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
            +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 406 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 445

Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.

Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
156551676	448	PREDICTED: beclin-1-like protein isoform	0.669	0.475	0.738	1e-91
340714196	430	PREDICTED: beclin-1-like protein-like [B	0.669	0.495	0.742	1e-91
383852730	431	PREDICTED: beclin-1-like protein-like [M	0.669	0.494	0.742	1e-91
48095924	430	PREDICTED: autophagy-specific gene 6 [Ap	0.669	0.495	0.742	1e-91
380026093	430	PREDICTED: beclin-1-like protein-like [A	0.669	0.495	0.742	1e-91
332020147	431	Beclin-1-like protein [Acromyrmex echina	0.669	0.494	0.733	3e-90
307179111	431	Beclin-1-like protein [Camponotus florid	0.669	0.494	0.728	1e-89
307206903	430	Beclin-1-like protein [Harpegnathos salt	0.669	0.495	0.728	2e-89
405962807	434	Beclin-1 [Crassostrea gigas]	0.679	0.497	0.711	9e-89
242017269	374	beclin, putative [Pediculus humanus corp	0.669	0.569	0.720	3e-87

>gi|156551676|ref|XP_001601439.1| PREDICTED: beclin-1-like protein isoform 1 [Nasonia vitripennis] gi|345489928|ref|XP_003426264.1| PREDICTED: beclin-1-like protein isoform 2 [Nasonia vitripennis]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/214 (73%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           +E    ++D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 REFSRHRRDLILAEDECRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLLTALARK+NLTFQR+R+VP+GNHSYIE   +HK LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLTALARKMNLTFQRFRLVPFGNHSYIEVLDQHKELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY M+ +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRME-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714196|ref|XP_003395617.1| PREDICTED: beclin-1-like protein-like [Bombus terrestris] gi|350422324|ref|XP_003493129.1| PREDICTED: beclin-1-like protein-like [Bombus impatiens]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHKRDLILAEDEYRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLLTALARK+NLTF+R+R+VP+GNHSYIE   +H+ LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLTALARKMNLTFKRFRLVPFGNHSYIEALDQHRELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852730|ref|XP_003701878.1| PREDICTED: beclin-1-like protein-like [Megachile rotundata]

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 212 KEYSKHKRDLILAEDEYRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 271

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLLTALARK+NLTF+R+R+VP+GNHSYIE   +H+ LPL
Sbjct: 272 GRLPSAPVDWSEINAAWGQTTLLLTALARKMNLTFKRFRLVPFGNHSYIEALDQHRELPL 331

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 332 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDSATGNSY 390

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 391 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 424

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48095924|ref|XP_392365.1| PREDICTED: autophagy-specific gene 6 [Apis mellifera]

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHKRDLILAEDEYRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLLTALARK+NLTF+R+R+VP+GNHSYIE   +H+ LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLTALARKMNLTFKRFRLVPFGNHSYIEALDQHRELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026093|ref|XP_003696795.1| PREDICTED: beclin-1-like protein-like [Apis florea]

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHKRDLILAEDEYRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLLTALARK+NLTF+R+R+VP+GNHSYIE   +H+ LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLTALARKMNLTFKRFRLVPFGNHSYIEALDQHRELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020147|gb|EGI60591.1| Beclin-1-like protein [Acromyrmex echinatior]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 157/214 (73%), Positives = 180/214 (84%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    ++D     D  ++L+ QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHRRDLMLADDECRSLDNQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLL ALARK+NLTF+R+R+VP+GNHSYIE   ++K LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLVALARKMNLTFKRFRLVPFGNHSYIEALDQNKELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDSEF LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSEFCLPYRMD-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307179111|gb|EFN67583.1| Beclin-1-like protein [Camponotus floridanus]

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    ++D     D  ++L+ QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHRRDLMLAEDECRSLDNQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPSAPVDWSEINAAWGQT LLL ALARK+NLTF+R+R+VP+GNHSYIE   ++K LPL
Sbjct: 271 GRLPSAPVDWSEINAAWGQTTLLLVALARKMNLTFKRFRLVPFGNHSYIEALDQNKELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDSATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206903|gb|EFN84749.1| Beclin-1-like protein [Harpegnathos saltator]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 156/214 (72%), Positives = 179/214 (83%), Gaps = 1/214 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+D     D  ++LE QL Y+ SQL + K TNVFNATFHIWHSGHFGTIN+FRL
Sbjct: 211 KEYSKHKRDALLAEDECRSLECQLAYAASQLERLKKTNVFNATFHIWHSGHFGTINSFRL 270

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLPL 217
           G LPS PVDWSEINAAWGQT LLL++LARK+NLTF+R+R+VP+GNHSYIE   ++K LPL
Sbjct: 271 GRLPSVPVDWSEINAAWGQTTLLLSSLARKMNLTFKRFRLVPFGNHSYIEALDQNKELPL 330

Query: 218 FASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTY 277
           + SGG KF WDTKFD AMVAFLDCLQQFKE++EKGDS F LPY MD +GKIED  TGN+Y
Sbjct: 331 YGSGGFKFLWDTKFDAAMVAFLDCLQQFKEQVEKGDSGFCLPYRMD-RGKIEDTATGNSY 389

Query: 278 SVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           S+K QFNS+EQWTKALKF+LTNLKWGLAWVSSQF
Sbjct: 390 SIKIQFNSEEQWTKALKFLLTNLKWGLAWVSSQF 423

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405962807|gb|EKC28450.1| Beclin-1 [Crassostrea gigas]

 Score =  333 bits (853), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 155/218 (71%), Positives = 183/218 (83%), Gaps = 2/218 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
           KE    K+  QE  D  ++++ QL+Y+ +QL+K K TNVFN TFHIWHSGHFGTINNFRL
Sbjct: 218 KEYNEYKRQVQELEDEQRSVDNQLKYAQTQLDKLKKTNVFNTTFHIWHSGHFGTINNFRL 277

Query: 158 GTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH-KNLP 216
           G LPS PVDW+EINAAWGQT LLL +LA+K+NLTFQRYR+VP+GNHSYIE  ++  K LP
Sbjct: 278 GRLPSVPVDWNEINAAWGQTVLLLNSLAKKMNLTFQRYRLVPFGNHSYIESLSDKSKELP 337

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNT 276
           L+ SGG +FFWDTKFD AMVAFLDCLQQFKEE+EKGD+ F LPY M+ KGKIED +TG +
Sbjct: 338 LYGSGGFRFFWDTKFDQAMVAFLDCLQQFKEEVEKGDTGFCLPYKME-KGKIEDSSTGTS 396

Query: 277 YSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
           YS+K QFNS+EQWTKALK+MLTNLKWGLAWVSSQF N+
Sbjct: 397 YSIKIQFNSEEQWTKALKYMLTNLKWGLAWVSSQFANK 434

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|242017269|ref|XP_002429114.1| beclin, putative [Pediculus humanus corporis] gi|212513978|gb|EEB16376.1| beclin, putative [Pediculus humanus corporis]

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/215 (72%), Positives = 178/215 (82%), Gaps = 2/215 (0%)

Query: 98  KELKNTKQDFQEYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSG-HFGTINNFR 156
           +E  + ++D     D  K+LE QL Y+ SQL K K TNVFNATFHIWHSG HFGTINNFR
Sbjct: 152 REYSHHRRDLMVAEDESKSLECQLAYTQSQLEKLKKTNVFNATFHIWHSGGHFGTINNFR 211

Query: 157 LGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKNLP 216
           LG LPSAPVDWSEINAAWGQTALLL+ALARK+NLTFQRY++VP+GNHSYIE   +HK LP
Sbjct: 212 LGRLPSAPVDWSEINAAWGQTALLLSALARKINLTFQRYKVVPFGNHSYIEVLEDHKELP 271

Query: 217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNT 276
           L+ SGG ++ WD+KFD AMVAFLDCLQQFK E+EKG+SEF LPY MD KGKIED  TG +
Sbjct: 272 LYGSGGIRYLWDSKFDAAMVAFLDCLQQFKNEMEKGNSEFCLPYKMD-KGKIEDSATGIS 330

Query: 277 YSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQF 311
           +S+K  FNS+EQWTKALKF+LTNLKW LAWV SQF
Sbjct: 331 FSIKTHFNSEEQWTKALKFLLTNLKWALAWVFSQF 365

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	318
FB|FBgn0264325	422	Atg6 "Autophagy-specific gene	0.572	0.431	0.693	1.6e-92
RGD|620190	448	Becn1 "beclin 1, autophagy rel	0.682	0.484	0.631	6.3e-89
UNIPROTKB|E2RNW7	463	AARSD1 "Uncharacterized protei	0.682	0.468	0.627	1e-88
UNIPROTKB|Q4A1L4	448	BECN1 "Beclin-1" [Bos taurus (	0.682	0.484	0.627	1.7e-88
MGI|MGI:1891828	448	Becn1 "beclin 1, autophagy rel	0.682	0.484	0.627	1.7e-88
UNIPROTKB|Q14457	450	BECN1 "Beclin-1" [Homo sapiens	0.682	0.482	0.627	2.7e-88
UNIPROTKB|F1P5F5	447	BECN1 "Beclin-1" [Gallus gallu	0.682	0.485	0.631	2.7e-88
UNIPROTKB|Q5ZKS6	447	BECN1 "Beclin-1" [Gallus gallu	0.682	0.485	0.631	2.7e-88
UNIPROTKB|F1S1F6	448	BECN1 "Beclin-1" [Sus scrofa (	0.682	0.484	0.627	2.7e-88
UNIPROTKB|Q4A1L5	448	BECN1 "Beclin-1" [Sus scrofa (	0.682	0.484	0.627	2.7e-88

FB|FBgn0264325 Atg6 "Autophagy-specific gene 6" [Drosophila melanogaster (taxid:7227)]

 Score = 710 (255.0 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
 Identities = 127/183 (69%), Positives = 147/183 (80%)

Query:   129 NKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQXXXXXXXXXXXX 188
             +K + TN+FN TFHIWH+GHFGTINNFRLG LPS  VDWSEINAAWGQ            
Sbjct:   238 DKLRDTNIFNITFHIWHAGHFGTINNFRLGRLPSVSVDWSEINAAWGQTVLLLSALARKI 297

Query:   189 XXXFQRYRIVPYGNHSYIEDTTEHKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEE 248
                F+RYR+VP+GNHSY+E   E++ LPL+ SGG KFFWDTKFD AMVAFLDCL QF++E
Sbjct:   298 GLTFERYRVVPFGNHSYVEVLGENRELPLYGSGGFKFFWDTKFDAAMVAFLDCLTQFQKE 357

Query:   249 LEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVS 308
             +EK D+EF LPY M+ KGKI D +TGN+YS+K QFNS+EQWTKALKFMLTNLKWGLAWVS
Sbjct:   358 VEKRDTEFLLPYKME-KGKIIDPSTGNSYSIKIQFNSEEQWTKALKFMLTNLKWGLAWVS 416

Query:   309 SQF 311
             SQF
Sbjct:   417 SQF 419

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0006914 "autophagy" evidence=IEA

RGD|620190 Becn1 "beclin 1, autophagy related" [Rattus norvegicus (taxid:10116)]

 Score = 728 (261.3 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
 Identities = 139/220 (63%), Positives = 159/220 (72%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPSAPV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   289 GRLPSAPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

GO:0000045 "autophagic vacuole assembly" evidence=IMP

GO:0000910 "cytokinesis" evidence=ISO;ISS

GO:0001666 "response to hypoxia" evidence=IEP

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA;ISO

GO:0006914 "autophagy" evidence=IEP;ISO;IMP

GO:0007040 "lysosome organization" evidence=IEA;ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA;ISO

GO:0016239 "positive regulation of macroautophagy" evidence=IEA;ISO

GO:0030425 "dendrite" evidence=IDA

GO:0033197 "response to vitamin E" evidence=IEP

GO:0042493 "response to drug" evidence=IEP

GO:0043234 "protein complex" evidence=IEA;ISO

GO:0048666 "neuron development" evidence=IEA;ISO

GO:0050435 "beta-amyloid metabolic process" evidence=IEA;ISO

GO:0051607 "defense response to virus" evidence=IEA

GO:0051707 "response to other organism" evidence=ISO

GO:0060548 "negative regulation of cell death" evidence=IMP

GO:0071275 "cellular response to aluminum ion" evidence=IEP

GO:0071364 "cellular response to epidermal growth factor stimulus" evidence=IEP

UNIPROTKB|E2RNW7 AARSD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 724 (259.9 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   244 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 303

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   304 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 363

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   364 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 423

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   424 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 463

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|Q4A1L4 BECN1 "Beclin-1" [Bos taurus (taxid:9913)]

 Score = 724 (259.9 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

GO:0000910 "cytokinesis" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0050435 "beta-amyloid metabolic process" evidence=IEA

GO:0048666 "neuron development" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0007040 "lysosome organization" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

MGI|MGI:1891828 Becn1 "beclin 1, autophagy related" [Mus musculus (taxid:10090)]

 Score = 724 (259.9 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   229 REYSEFKRQQLELDDELKSVENQVRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

GO:0000045 "autophagic vacuole assembly" evidence=ISO

GO:0000910 "cytokinesis" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005856 "cytoskeleton" evidence=ISS

GO:0006914 "autophagy" evidence=ISO;IMP;IDA

GO:0007040 "lysosome organization" evidence=IMP

GO:0007049 "cell cycle" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IDA

GO:0016020 "membrane" evidence=ISS

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0016239 "positive regulation of macroautophagy" evidence=IGI

GO:0030425 "dendrite" evidence=ISO

GO:0043234 "protein complex" evidence=IDA

GO:0048666 "neuron development" evidence=IMP

GO:0050435 "beta-amyloid metabolic process" evidence=IMP

GO:0051301 "cell division" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0051707 "response to other organism" evidence=IDA

GO:0060548 "negative regulation of cell death" evidence=ISO

UNIPROTKB|Q14457 BECN1 "Beclin-1" [Homo sapiens (taxid:9606)]

 Score = 725 (260.3 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   231 REYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 290

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   291 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 350

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   351 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 410

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   411 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 450

GO:0007049 "cell cycle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0007040 "lysosome organization" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0033197 "response to vitamin E" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0048666 "neuron development" evidence=IEA

GO:0050435 "beta-amyloid metabolic process" evidence=IEA

GO:0071275 "cellular response to aluminum ion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0000910 "cytokinesis" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=TAS

GO:0006968 "cellular defense response" evidence=TAS

UNIPROTKB|F1P5F5 BECN1 "Beclin-1" [Gallus gallus (taxid:9031)]

 Score = 724 (259.9 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 139/220 (63%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             KE    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   228 KEYCEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 287

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   288 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 347

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   348 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 407

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   408 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 447

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|Q5ZKS6 BECN1 "Beclin-1" [Gallus gallus (taxid:9031)]

 Score = 724 (259.9 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 139/220 (63%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             KE    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   228 KEYCEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 287

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   288 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 347

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   348 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 407

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   408 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 447

GO:0006914 "autophagy" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000910 "cytokinesis" evidence=ISS

UNIPROTKB|F1S1F6 BECN1 "Beclin-1" [Sus scrofa (taxid:9823)]

 Score = 724 (259.9 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

GO:0051707 "response to other organism" evidence=IEA

GO:0050435 "beta-amyloid metabolic process" evidence=IEA

GO:0048666 "neuron development" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0007040 "lysosome organization" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0000910 "cytokinesis" evidence=IEA

UNIPROTKB|Q4A1L5 BECN1 "Beclin-1" [Sus scrofa (taxid:9823)]

 Score = 724 (259.9 bits), Expect = 2.7e-88, Sum P(2) = 2.7e-88
 Identities = 138/220 (62%), Positives = 158/220 (71%)

Query:    98 KELKNTKQDFQEYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRL 157
             +E    K+   E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRL
Sbjct:   229 REYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRL 288

Query:   158 GTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLP 216
             G LPS PV+W+EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LP
Sbjct:   289 GRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELP 348

Query:   217 LFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDET-TG 274
             L+ SGG +FFWD KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G
Sbjct:   349 LYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSG 408

Query:   275 NTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
              +YS+K QFNS+EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct:   409 GSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK 448

GO:0000910 "cytokinesis" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R878	BECN1_PONAB	No assigned EC number	0.6909	0.6823	0.4822	yes	N/A
Q91XJ1	BECN1_RAT	No assigned EC number	0.6954	0.6823	0.4843	yes	N/A
Q9VCE1	BECN1_DROME	No assigned EC number	0.6869	0.6698	0.5047	yes	N/A
Q5ZKS6	BECN1_CHICK	No assigned EC number	0.6954	0.6823	0.4854	yes	N/A
Q14457	BECN1_HUMAN	No assigned EC number	0.6909	0.6823	0.4822	yes	N/A
Q4A1L5	BECN1_PIG	No assigned EC number	0.6909	0.6823	0.4843	yes	N/A
Q4A1L4	BECN1_BOVIN	No assigned EC number	0.6909	0.6823	0.4843	yes	N/A
Q4A1L3	BECN1_XENTR	No assigned EC number	0.6909	0.6823	0.4876	yes	N/A
O88597	BECN1_MOUSE	No assigned EC number	0.6909	0.6823	0.4843	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	318
pfam04111	356	pfam04111, APG6, Autophagy protein Apg6	1e-101
pfam04111	356	pfam04111, APG6, Autophagy protein Apg6	2e-14

>gnl|CDD|217902 pfam04111, APG6, Autophagy protein Apg6

 Score =  301 bits (772), Expect = e-101
 Identities = 143/253 (56%), Positives = 169/253 (66%), Gaps = 32/253 (12%)

Query: 93  LDMMDKELKNTKQDFQ-EYSDF----------LKTLELQLQYSLSQLNKFKSTNVFNATF 141
           L    ++L+N +  +  EY+ F          L++LELQ +YSL+QL+K + TN+FNATF
Sbjct: 103 LQEEKEQLENEELQYLREYNLFDRNNLQLEDNLQSLELQYEYSLNQLDKLRKTNIFNATF 162

Query: 142 HIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYG 201
           HI HSG F TIN  RLG LPS  V W EINAAWGQT LLL ALA+KL L F RYR+VP+G
Sbjct: 163 HISHSGPFATINGLRLGRLPSVVVPWKEINAAWGQTVLLLAALAKKLGLNFVRYRLVPFG 222

Query: 202 NHSYIEDTTEHKN-------------------LPLFASGGAKFFWDTKFDMAMVAFLDCL 242
           +HSYIE    +                     L L+ SGG KFFWDTKFD AMVAFLDCL
Sbjct: 223 SHSYIEKLMVNSVEYNNSTTNAPGDWLILPVELDLYFSGGLKFFWDTKFDKAMVAFLDCL 282

Query: 243 QQFKEELEKGDSEFHLPYNMD-SKGKIED-ETTGNTYSVKYQFNSQEQWTKALKFMLTNL 300
            QF  E+EK  ++F LPY M+  KGKI D E +G +YS+KYQFNS EQWTKALKFMLTNL
Sbjct: 283 SQFTREVEKIATQFLLPYQMESEKGKINDVENSGGSYSIKYQFNSDEQWTKALKFMLTNL 342

Query: 301 KWGLAWVSSQFKN 313
           KW LAWVSSQF  
Sbjct: 343 KWLLAWVSSQFSK 355

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway. Length = 356

>gnl|CDD|217902 pfam04111, APG6, Autophagy protein Apg6

 Score = 72.6 bits (178), Expect = 2e-14
 Identities = 29/58 (50%), Positives = 39/58 (67%)

Query: 63  QMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTLELQ 120
           Q+K   NLFD LSS + IDHPLCEEC D LL+ +D EL++ +++   Y  +L  LE Q
Sbjct: 1   QVKAMTNLFDILSSQTNIDHPLCEECADILLERLDSELRDAEKERDTYKQYLSKLESQ 58

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway. Length = 356

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	318
KOG2751|consensus	447		100.0
PF04111	314	APG6: Autophagy protein Apg6; InterPro: IPR007243	100.0
PF10186	302	Atg14: UV radiation resistance protein and autopha	98.54
KOG2896|consensus	377		98.18
KOG2751|consensus	447		96.83
PF15285	25	BH3: Beclin-1 BH3 domain, Bcl-2-interacting; PDB:	96.12

>KOG2751|consensus

Probab=100.00  E-value=1.1e-92  Score=692.89  Aligned_cols=286  Identities=55%  Similarity=0.994  Sum_probs=273.8

Q ss_pred             cccccCCcCCCccccccCCCCCceEEe---ecCCCCCCcchHHHHHHHHHHhhcCCCCCccCchHHHHHHHHHHHHHHHH
Q psy16001         25 QANSLDHFVPAFKLVDSTNGSNGFCLL---GKDESSNSKGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELK  101 (318)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~f~l~---~~~~~~~~ls~~~~~~~~lFdilS~~s~iDhPlC~eCtd~Lle~l~~~l~  101 (318)
                      ++++..+++||.|.+...+. .+|.+.   +++..+.++|+++++++++|+|||++++||||+|+||+|.|++.||++++
T Consensus        75 ~~~~~~~~~~p~r~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~f~i~~~qt~~d~PlC~eC~d~l~~~ld~e~~  153 (447)
T KOG2751|consen   75 ESSVVVYFSPPVRDSDTEHN-LSFELGENGSDGSNTKTLSATINVLTRLFDILSSQTQVDHPLCEECMDVLLNKLDKEVE  153 (447)
T ss_pred             hccceecccCcccccccccc-cccccccccchhhhhHHHHHHHHHHHHHHHHhhccCCcccchHHHHHHHHHHHHHHHHH
Confidence            45677799999999999988 789987   45667889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH----------------------------------------------------------------
Q psy16001        102 NTKQDFQEYSDFLKTL----------------------------------------------------------------  117 (318)
Q Consensus       102 ~~~~E~~~Y~~~L~~l----------------------------------------------------------------  117 (318)
                      .+++|+++|++|++.|                                                                
T Consensus       154 ~~~~e~~~Y~~~l~~Le~~~~~~~~~~~~~e~~~l~~eE~~L~q~lk~le~~~~~l~~~l~e~~~~~~~~~e~~~~~~~e  233 (447)
T KOG2751|consen  154 DAEDEVDTYKACLQRLEQQNQDVSEEDLLKELKNLKEEEERLLQQLEELEKEEAELDHQLKELEFKAERLNEEEDQYWRE  233 (447)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999887                                                                


Q ss_pred             ------------------HHHHHHHHHHHHHHHhcccCcceeeeeecCceeeeccccCCCCCCCCCChHHHHHHHHHHHH
Q psy16001        118 ------------------ELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTAL  179 (318)
Q Consensus       118 ------------------e~q~~~~~~qLd~L~ktNv~n~~F~I~hdG~fGTINGlRLGrlp~~~V~W~EINAAwGQ~~L  179 (318)
                                        |+|++|++.||++|++|||||++|||||+|+|||||||||||+|.+||+|+||||||||++|
T Consensus       234 y~~~~~q~~~~~del~Sle~q~~~s~~qldkL~ktNv~n~~F~I~~~G~fgtIN~FRLG~lp~~pVew~EINAA~GQ~vL  313 (447)
T KOG2751|consen  234 YNNFQRQLIEHQDELDSLEAQIEYSQAQLDKLRKTNVFNATFHIWHDGEFGTINNFRLGRLPSVPVEWDEINAAWGQTVL  313 (447)
T ss_pred             HHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHhhhhhhheeeEeecccccccccceeccccCCCcCHHHHHHHhhhHHH
Confidence                              68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCcccccceeeecCCCceEEecCCC--ceEeccccCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy16001        180 LLTALARKLNLTFQRYRIVPYGNHSYIEDTTEH--KNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFH  257 (318)
Q Consensus       180 LL~~la~kl~~~f~~Y~LvP~GS~S~I~~~~~~--~~l~Ly~sg~~~~f~~~kFD~AM~afL~cl~q~~~~v~~~~~~~~  257 (318)
                      ||+++++|+|++|++|+||||||||||+++..+  +.+|+|++|+++|||++|||+||+|||+||+||.++++++++++.
T Consensus       314 LL~~l~~kig~~~~~y~lvp~GshSyI~~~~~~~~~el~l~~sgg~~~f~~tkfD~amvafLd~L~qf~~e~~~k~~~~~  393 (447)
T KOG2751|consen  314 LLHTLANKIGLNFVRYRLVPMGSHSYIKKRMVNLPYELPLFQSGGLKFFWSTKFDKAMVAFLDCLKQFADELEKKDTSFN  393 (447)
T ss_pred             HHHHHHHhcCcccceeeeecccchhHHHHhccCCCccchhhcCCCceeeeccccCHHHHHHHHHHHHHHHHHHhcCcccC
Confidence            999999999999999999999999999998886  899999999999999999999999999999999999999999999


Q ss_pred             CceeeccCCccccCCCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHHHhhhcccc
Q psy16001        258 LPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ  314 (318)
Q Consensus       258 LPY~I~~kdkI~D~~~g~~~SIr~~~nsee~WTkAlK~mLtNlKw~La~~s~~~~~~  314 (318)
                      +||.|+ +|+|+|+.  +.|+|++++|++++||+||||||||+||++||+|++++++
T Consensus       394 lPy~ie-~d~i~d~~--~~y~i~~~fN~De~WTrALkFmLTnlK~~~A~vss~~~~s  447 (447)
T KOG2751|consen  394 LPYDIE-KDKLNDPS--SSYSIKVQFNSDENWTRALKFMLTNLKWLLAWVSSLFSKS  447 (447)
T ss_pred             Ccchhh-cccccCCc--cceeEEeeecchHHHHHHHHHHHhccHHHHHHHhhhhcCC
Confidence            999999 99999993  6899999999999999999999999999999999998653

>PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells

Probab=100.00  E-value=2e-87  Score=641.43  Aligned_cols=224  Identities=58%  Similarity=1.036  Sum_probs=153.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------------------------
Q psy16001         83 PLCEECTDTLLDMMDKELKNTKQDFQEYSDFLKTL---------------------------------------------  117 (318)
Q Consensus        83 PlC~eCtd~Lle~l~~~l~~~~~E~~~Y~~~L~~l---------------------------------------------  117 (318)
                      |||+||++.|+++|+.+++++++||++|..||+++                                             
T Consensus         1 PlC~eC~~~l~~~l~~~~~~~~~E~~~Y~~fL~~l~~~~~~~~~~~~~~~el~~le~Ee~~l~~eL~~LE~e~~~l~~el   80 (314)
T PF04111_consen    1 PLCQECTDLLLEQLDKQLEQAEKERDTYQEFLKKLEEESDSEEDIEELEEELEKLEQEEEELLQELEELEKEREELDQEL   80 (314)
T ss_dssp             -----------------------------------------HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999876                                             


Q ss_pred             --------------------------------------HHHHHHHHHHHHHHHhcccCcceeeeeecCceeeeccccCCC
Q psy16001        118 --------------------------------------ELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGT  159 (318)
Q Consensus       118 --------------------------------------e~q~~~~~~qLd~L~ktNv~n~~F~I~hdG~fGTINGlRLGr  159 (318)
                                                            ++|++++++||++|+||||||++|||||||+|||||||||||
T Consensus        81 ~~le~e~~~l~~eE~~~~~~~n~~~~~l~~~~~e~~sl~~q~~~~~~~L~~L~ktNv~n~~F~I~hdG~fGTINGlRLGr  160 (314)
T PF04111_consen   81 EELEEELEELDEEEEEYWREYNELQLELIEFQEERDSLKNQYEYASNQLDRLRKTNVYNDTFHIWHDGPFGTINGLRLGR  160 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHT--TTTTT--EEEETTEEEETTEEE--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhceeeEeecCCeeeECCeeecc
Confidence                                                  478899999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHcCcccccceeeecCCCceEEecCC---CceEeccccCCC---cccccccchH
Q psy16001        160 LPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTE---HKNLPLFASGGA---KFFWDTKFDM  233 (318)
Q Consensus       160 lp~~~V~W~EINAAwGQ~~LLL~~la~kl~~~f~~Y~LvP~GS~S~I~~~~~---~~~l~Ly~sg~~---~~f~~~kFD~  233 (318)
                      +|++||+|+||||||||+||||++||+++|++|++|+|+||||+|+|++..+   +.+||||++|++   ++|++++||.
T Consensus       161 l~~~~V~W~EINAA~Gq~~LLL~~la~~l~~~f~~y~l~P~Gs~S~I~~~~~~~~~~~~~ly~~~~~~~~~~f~~~~Fd~  240 (314)
T PF04111_consen  161 LPNVPVEWNEINAAWGQTALLLQTLAKKLNFKFQRYRLVPMGSFSKIEKLEGDKDKTTYPLYSSGSFSLGRLFSSRKFDK  240 (314)
T ss_dssp             BTTB---HHHHHHHHHHHHHHHHHHHHHCT---SSEEEE--GGG-EEEECS---TCEEEESS--SS----GGG--SHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCcccceeEecCCCCEEEEeccCCCCeEEecccCCCchhhhhhhhcchHH
Confidence            9999999999999999999999999999999999999999999999999984   489999999998   8999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCC-CCCCceeeccCCccccCCCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHHHhhhcc
Q psy16001        234 AMVAFLDCLQQFKEELEKGDS-EFHLPYNMDSKGKIEDETTGNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFK  312 (318)
Q Consensus       234 AM~afL~cl~q~~~~v~~~~~-~~~LPY~I~~kdkI~D~~~g~~~SIr~~~nsee~WTkAlK~mLtNlKw~La~~s~~~~  312 (318)
                      ||+|||+||+|+++++++.++ +++|||+|+ ||||+      |.||++++|++++||+||||||||+||+++|+|++++
T Consensus       241 am~~~L~~~~q~~~~~~~~~~~~~~lPy~i~-~~~I~------~~si~~~~~~~~~WT~AlK~lLtnlKw~l~~~s~~~~  313 (314)
T PF04111_consen  241 AMVAFLDCLQQLAEFVEKRDPQSFELPYKID-KDKIG------GVSIKLQFNSEEEWTKALKYLLTNLKWLLAWVSSQLS  313 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-----SS-EC-TTEEC------TCES-STTS-HHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccccceecc-CCccC------CeeeeecCCChhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999998 899999999 99995      4699999999999999999999999999999999975


Q ss_pred             c
Q psy16001        313 N  313 (318)
Q Consensus       313 ~  313 (318)
                      +
T Consensus       314 ~  314 (314)
T PF04111_consen  314 Q  314 (314)
T ss_dssp             -
T ss_pred             C
Confidence            3

In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [].; GO: 0006914 autophagy; PDB: 3Q8T_A 3VP7_A 4DDP_A.

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking

Probab=98.54  E-value=2.1e-06  Score=79.44  Aligned_cols=109  Identities=25%  Similarity=0.306  Sum_probs=80.9

Q ss_pred             ccCcceeeeee-----------cCceeeeccccCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHcCcccccceeeecCC
Q psy16001        135 NVFNATFHIWH-----------SGHFGTINNFRLGTLPS-APVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGN  202 (318)
Q Consensus       135 Nv~n~~F~I~h-----------dG~fGTINGlRLGrlp~-~~V~W~EINAAwGQ~~LLL~~la~kl~~~f~~Y~LvP~GS  202 (318)
                      .-....|.|..           .+.|. |.|+.|-...+ ...+=.+|+||+|+++.|+..+|..+++.+ .|++.|+||
T Consensus       151 ~~l~~ifpI~~~~~~~~~~~~~~~~~~-I~~~~lp~~~~~~~~~~~~isaALgyvahlv~lls~yL~v~L-py~i~~~gs  228 (302)
T PF10186_consen  151 QELSEIFPIEQVSSPRRPSDSSSSEYT-ICGLPLPNSRDFNSLPDEEISAALGYVAHLVSLLSRYLGVPL-PYPITPSGS  228 (302)
T ss_pred             HHHHHHhCceeecccccCCCCCCCCee-ecCcccCCCcccccCCHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCcccCcc
Confidence            34566899932           45676 99998876543 456668999999999999999999999997 799999999


Q ss_pred             CceEEecCC--CceEeccccCCCcccccccchHHHHHHHHHHHHHHH
Q psy16001        203 HSYIEDTTE--HKNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKE  247 (318)
Q Consensus       203 ~S~I~~~~~--~~~l~Ly~sg~~~~f~~~kFD~AM~afL~cl~q~~~  247 (318)
                      +|+|.+..+  ...++.+..+.  --...+|..|+..+..-+.|++.
T Consensus       229 ~s~i~d~~~~~~~~~~~~~~~~--~~~~~~f~~~v~lLn~nI~~L~~  273 (302)
T PF10186_consen  229 RSTIIDFSPSIDRPLPSLSYES--GVDRQRFEYAVFLLNKNIAQLCF  273 (302)
T ss_pred             ccchhhcccccCCcchhhhccc--cccHHHHHHHHHHHHHHHHHHHH
Confidence            999887211  12333222111  11246899999999999999997

In yeast, two distinct PI3-kinase complexes are known: complex I (Vps34, Vps15, Vps30/Atg6, and Atg14) is involved in autophagy, and complex II (Vps34, Vps15, Vps30/Atg6, and Vps38) functions in the vacuolar protein sorting pathway. In mammals, the counterparts of Vps34, Vps15, and Vps30/Atg6 are Vps34, p150, and Beclin 1, respectively. Mammalian UV irradiation resistance-associated gene (UVRAG) has been identified as identical to yeast Vps38 []. The Atg14 (autophagy-related protein 14) proteins are hydrophilic proteins and have a coiled-coil motif at the N terminus region. Yeast cells with mutant Atg14 are defective not only in autophagy but also in sorting of carboxypeptidase Y (CPY), a vacuolar-soluble hydrolase, to the vacuole []. This entry represents Atg14 and UVRAG, which bind Beclin 1 to forms two distinct PI3-kinase complexes. This entry also includes Bakor (beclin-1-associated autophagy-related key regulator), also known as autophagy-related protein 14-like protein, which share sequence similarity to the yeast Atg14 protein []. Barkor positively regulates autophagy through its interaction with Beclin-1, with decreased levels of autophagosome formation observed when Barkor expression is eliminated []. Autophagy mediates the cellular response to nutrient deprivation, protein aggregation, and pathogen invasion in humans, and malfunction of autophagy has been implicated in multiple human diseases including cancer. ; GO: 0010508 positive regulation of autophagy

>KOG2896|consensus

Probab=98.18  E-value=1.9e-05  Score=78.15  Aligned_cols=119  Identities=23%  Similarity=0.369  Sum_probs=84.6

Q ss_pred             HHHHHHHhcccCc---ceeeeeecC-cee--------------eeccccCCCCCCCC-CChHHHHHHHHHHHHHHHHHHH
Q psy16001        126 SQLNKFKSTNVFN---ATFHIWHSG-HFG--------------TINNFRLGTLPSAP-VDWSEINAAWGQTALLLTALAR  186 (318)
Q Consensus       126 ~qLd~L~ktNv~n---~~F~I~hdG-~fG--------------TINGlRLGrlp~~~-V~W~EINAAwGQ~~LLL~~la~  186 (318)
                      ..|...++++.--   ++|.|..+| +.-              ||-|++|--.++.. =+=.|+-||+|.+|.|++.||+
T Consensus       169 ~~l~a~re~fL~~~~~~~~~irq~~~~~s~i~~l~~~~~~~v~tIrGl~lp~~~d~~~~s~~~~aaALGylaHLv~~Is~  248 (377)
T KOG2896|consen  169 NELVAKRELFLEQRIQDTFKIRQDGSPLSKILPLQFSYCHLVFTIRGLKLPFIEDKQNKSEQETAAALGYLAHLVSMISK  248 (377)
T ss_pred             HHHHHHHHhhHhHHHhhhhhhhccCcchheeecCCcccchhhhhhhcccCCchhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence            4444555555432   589999886 333              45555554444321 1467899999999999999999


Q ss_pred             HcCcccccceeeecCCCceEEecCCC--c---eEeccccCCCcccccccchHHHHHHHHHHHHHHHHH
Q psy16001        187 KLNLTFQRYRIVPYGNHSYIEDTTEH--K---NLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEEL  249 (318)
Q Consensus       187 kl~~~f~~Y~LvP~GS~S~I~~~~~~--~---~l~Ly~sg~~~~f~~~kFD~AM~afL~cl~q~~~~v  249 (318)
                      .+.+.. +|.|++.||.|+|.+..++  .   ++|||.-+.-    ..+|+.||--+-.-+.|+..-+
T Consensus       249 ~L~~pL-RYPIl~~~Sks~I~D~i~~~~~ttr~fply~k~~~----~e~f~~glylL~qNiaqlr~~~  311 (377)
T KOG2896|consen  249 YLEVPL-RYPILLAGSKSYIRDYIPDIETTTREFPLYTKSQE----IEQFEYGLYLLNQNIAQLRYDC  311 (377)
T ss_pred             Hhcccc-ccccccccccceecccCCccccccccccCccccch----HHHHHHHHHHHhccHHHHHHHc
Confidence            999996 8999999999999976554  2   3889865543    3567888877777777776654

>KOG2751|consensus

Probab=96.83  E-value=7.1e-05  Score=75.44  Aligned_cols=216  Identities=10%  Similarity=-0.037  Sum_probs=145.4

Q ss_pred             cchHHHHHHHHHHhhcCCCCCccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHH----H-------
Q psy16001         60 KGHQMKVYANLFDFLSSNSGIDHPLCEECTDTLLDMMDKELKNTKQDFQEYSD----------FLKTL----E-------  118 (318)
Q Consensus        60 ls~~~~~~~~lFdilS~~s~iDhPlC~eCtd~Lle~l~~~l~~~~~E~~~Y~~----------~L~~l----e-------  118 (318)
                      .+.....-...++-.++++.+|||.|..|...+...+-+=...+..+.-.|.+          |.+.+    +       
T Consensus        77 ~~~~~~~~p~r~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~f~i~~~qt~~d~PlC~eC~d~l~~~ld~e~~~~~  156 (447)
T KOG2751|consen   77 SVVVYFSPPVRDSDTEHNLSFELGENGSDGSNTKTLSATINVLTRLFDILSSQTQVDHPLCEECMDVLLNKLDKEVEDAE  156 (447)
T ss_pred             cceecccCcccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence            44445556678889999999999999999998877766544444444333332          22222    1       


Q ss_pred             ----------HHHHH------------H---------------------------------HHHHHHHHhcccCcceee-
Q psy16001        119 ----------LQLQY------------S---------------------------------LSQLNKFKSTNVFNATFH-  142 (318)
Q Consensus       119 ----------~q~~~------------~---------------------------------~~qLd~L~ktNv~n~~F~-  142 (318)
                                ..++.            .                                 ....+...+.++|.+-|. 
T Consensus       157 ~e~~~Y~~~l~~Le~~~~~~~~~~~~~e~~~l~~eE~~L~q~lk~le~~~~~l~~~l~e~~~~~~~~~e~~~~~~~ey~~  236 (447)
T KOG2751|consen  157 DEVDTYKACLQRLEQQNQDVSEEDLLKELKNLKEEEERLLQQLEELEKEEAELDHQLKELEFKAERLNEEEDQYWREYNN  236 (447)
T ss_pred             HHHHHHHHHHHHHhhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                      11110            0                                 011224556677777775 


Q ss_pred             -----eeecCceeeeccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCcccccceeeecCCCceEEecCC------
Q psy16001        143 -----IWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTE------  211 (318)
Q Consensus       143 -----I~hdG~fGTINGlRLGrlp~~~V~W~EINAAwGQ~~LLL~~la~kl~~~f~~Y~LvP~GS~S~I~~~~~------  211 (318)
                           |-|+|...+|++.|.|+++...+-|.+++++||-.+.+.-.++.+.||.+-+|..+|.|..+.+....-      
T Consensus       237 ~~~q~~~~~del~Sle~q~~~s~~qldkL~ktNv~n~~F~I~~~G~fgtIN~FRLG~lp~~pVew~EINAA~GQ~vLLL~  316 (447)
T KOG2751|consen  237 FQRQLIEHQDELDSLEAQIEYSQAQLDKLRKTNVFNATFHIWHDGEFGTINNFRLGRLPSVPVEWDEINAAWGQTVLLLH  316 (447)
T ss_pred             HHHhhhcccchHHHHHHHHHHHHHHHHHHHhhhhhhheeeEeecccccccccceeccccCCCcCHHHHHHHhhhHHHHHH
Confidence                 557899999999999999999999999999999999999999999999999999999998886654321      


Q ss_pred             --------C-ceEeccccCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCCceeeccCCccccCCCCCceeEEec
Q psy16001        212 --------H-KNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDSKGKIEDETTGNTYSVKYQ  282 (318)
Q Consensus       212 --------~-~~l~Ly~sg~~~~f~~~kFD~AM~afL~cl~q~~~~v~~~~~~~~LPY~I~~kdkI~D~~~g~~~SIr~~  282 (318)
                              + ..|.|-.-|+++                       ++++++.  .+||.-..   .    .+||..+.. 
T Consensus       317 ~l~~kig~~~~~y~lvp~GshS-----------------------yI~~~~~--~~~~el~l---~----~sgg~~~f~-  363 (447)
T KOG2751|consen  317 TLANKIGLNFVRYRLVPMGSHS-----------------------YIKKRMV--NLPYELPL---F----QSGGLKFFW-  363 (447)
T ss_pred             HHHHhcCcccceeeeecccchh-----------------------HHHHhcc--CCCccchh---h----cCCCceeee-
Confidence                    0 233332223322                       1222221  26665441   1    123444432 


Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhhc
Q psy16001        283 FNSQEQWTKALKFMLTNLKWGLAWVSSQF  311 (318)
Q Consensus       283 ~nsee~WTkAlK~mLtNlKw~La~~s~~~  311 (318)
                       ++  ..-+||--.|-.|+...-.++++.
T Consensus       364 -~t--kfD~amvafLd~L~qf~~e~~~k~  389 (447)
T KOG2751|consen  364 -ST--KFDKAMVAFLDCLKQFADELEKKD  389 (447)
T ss_pred             -cc--ccCHHHHHHHHHHHHHHHHHHhcC
Confidence             32  477999999999999999988774

>PF15285 BH3: Beclin-1 BH3 domain, Bcl-2-interacting; PDB: 3BL2_C 2P1L_H 3DVU_C 2PON_A

Probab=96.12  E-value=0.00063  Score=43.33  Aligned_cols=22  Identities=27%  Similarity=0.536  Sum_probs=18.2

Q ss_pred             CCCCcchHHHHHHHHHHhhcCC
Q psy16001         56 SSNSKGHQMKVYANLFDFLSSN   77 (318)
Q Consensus        56 ~~~~ls~~~~~~~~lFdilS~~   77 (318)
                      .+.++|+|++++..+|||+|++
T Consensus         4 ~~e~ls~rlkvtg~lfdimsGq   25 (25)
T PF15285_consen    4 TMENLSRRLKVTGDLFDIMSGQ   25 (25)
T ss_dssp             HHHHHHHHHHHHHHHHCCTT--
T ss_pred             cccccchhheecccccccccCC
Confidence            4567999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	318
4ddp_A	210	Crystal Structure Of Beclin 1 Evolutionarily Conser		1e-74
3vp7_A	220	Crystal Structure Of The Beta-Alpha Repeated, Autop		4e-19

>pdb|4DDP|A Chain A, Crystal Structure Of Beclin 1 Evolutionarily Conserved Domain(Ecd) Length = 210

Iteration: 1
 Score =  276 bits (705), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 136/209 (65%), Positives = 154/209 (73%), Gaps = 3/209 (1%)
Query: 109 EYSDFLKTXXXXXXXXXXXXNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWS 168
           E  D LK+            +K K TNVFNATFHIWHSG FGTINNFRLG LPS PV+W+
Sbjct: 2   ELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWN 61
Query: 169 EINAAWGQXXXXXXXXXXXXXXXFQRYRIVPYGNHSYIEDTTEH-KNLPLFASGGAKFFW 227
           EINAAWGQ               FQRYR+VPYGNHSY+E  T+  K LPL+ SGG +FFW
Sbjct: 62  EINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFW 121
Query: 228 DTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIEDE-TTGNTYSVKYQFNS 285
           D KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G +YS+K QFNS
Sbjct: 122 DNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNS 181
Query: 286 QEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
           +EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 182 EEQWTKALKFMLTNLKWGLAWVSSQFYNK 210

>pdb|3VP7|A Chain A, Crystal Structure Of The Beta-Alpha Repeated, Autophagy-Specific (Bara) Domain Of Vps30ATG6 Length = 220

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 54/221 (24%)
Query: 135 NVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQXXXXXXXXXXXXXXXFQR 194
           N+FNATF I HSG F TIN  RLG++P + V W EINAA GQ                  
Sbjct: 2   NIFNATFKISHSGPFATINGLRLGSIPESVVPWKEINAALGQLILLLATINKNLKINLVD 61
Query: 195 YRIVPYGNHSYIE----DTTEHKNLPLFASG---------------GAKFFWDTKFDMAM 235
           Y + P G+ S I+    ++ E+ N    A G               G  F  +TKFD ++
Sbjct: 62  YELQPMGSFSKIKKRMVNSVEYNNSTTNAPGDWLILPVYYDENFNLGRIFRKETKFDKSL 121
Query: 236 VAFLDCLQQFKEEL---------------------------EKGDSEFHLPYNMDSKGKI 268
              L+ + +   +L                           E   S   LPY M+ K KI
Sbjct: 122 ETTLEIISEITRQLSTIASSYSSQTLTTSQDESSMNNANDVENSTSILELPYIMN-KDKI 180
Query: 269 EDETTGNTYSVKYQFNSQE-QWTKALKFMLTNLKWGLAWVS 308
                 N  SVK   +S   +WT A+KF+LTN+KW LA+ S
Sbjct: 181 ------NGLSVKLHGSSPNLEWTTAMKFLLTNVKWLLAFSS 215

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	318
4ddp_A	210	Beclin-1; ECD, autophagy, membrane binding, membra	6e-90
3vp7_A	220	Vacuolar protein sorting-associated protein 30; ta	4e-76

>4ddp_A Beclin-1; ECD, autophagy, membrane binding, membrane protein; 1.55A {Homo sapiens} Length = 210

 Score =  266 bits (681), Expect = 6e-90
 Identities = 149/209 (71%), Positives = 173/209 (82%), Gaps = 3/209 (1%)

Query: 109 EYSDFLKTLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWS 168
           E  D LK++E Q++Y+ +QL+K K TNVFNATFHIWHSG FGTINNFRLG LPS PV+W+
Sbjct: 2   ELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWN 61

Query: 169 EINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIEDTTEHKN-LPLFASGGAKFFW 227
           EINAAWGQT LLL ALA K+ L FQRYR+VPYGNHSY+E  T+    LPL+ SGG +FFW
Sbjct: 62  EINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFW 121

Query: 228 DTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMD-SKGKIED-ETTGNTYSVKYQFNS 285
           D KFD AMVAFLDC+QQFKEE+EKG++ F LPY MD  KGKIED   +G +YS+K QFNS
Sbjct: 122 DNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNS 181

Query: 286 QEQWTKALKFMLTNLKWGLAWVSSQFKNQ 314
           +EQWTKALKFMLTNLKWGLAWVSSQF N+
Sbjct: 182 EEQWTKALKFMLTNLKWGLAWVSSQFYNK 210

>3vp7_A Vacuolar protein sorting-associated protein 30; targeting, PI3-kinase complex I, PRE-autophagosomal structur protein transport; 2.30A {Saccharomyces cerevisiae} Length = 220

 Score =  231 bits (590), Expect = 4e-76
 Identities = 71/224 (31%), Positives = 99/224 (44%), Gaps = 54/224 (24%)

Query: 135 NVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQR 194
           N+FNATF I HSG F TIN  RLG++P + V W EINAA GQ  LLL  + + L +    
Sbjct: 2   NIFNATFKISHSGPFATINGLRLGSIPESVVPWKEINAALGQLILLLATINKNLKINLVD 61

Query: 195 YRIVPYGNHSYIEDTT---------------EHKNLPLFASG----GAKFFWDTKFDMAM 235
           Y + P G+ S I+                  +   LP++       G  F  +TKFD ++
Sbjct: 62  YELQPMGSFSKIKKRMVNSVEYNNSTTNAPGDWLILPVYYDENFNLGRIFRKETKFDKSL 121

Query: 236 VAFLDCLQQFKEELEKGDSE---------------------------FHLPYNMDSKGKI 268
              L+ + +   +L    S                              LPY M+ K KI
Sbjct: 122 ETTLEIISEITRQLSTIASSYSSQTLTTSQDESSMNNANDVENSTSILELPYIMN-KDKI 180

Query: 269 EDETTGNTYSVKYQFNSQE-QWTKALKFMLTNLKWGLAWVSSQF 311
                    SVK   +S   +WT A+KF+LTN+KW LA+ S+  
Sbjct: 181 NG------LSVKLHGSSPNLEWTTAMKFLLTNVKWLLAFSSNLL 218

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	318
4ddp_A	210	Beclin-1; ECD, autophagy, membrane binding, membra	100.0
3vp7_A	220	Vacuolar protein sorting-associated protein 30; ta	100.0
2p1l_B	31	Beclin 1; apoptosis, autophagy, BH3 domain, BCL; 2	98.56
3q8t_A	96	Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90	93.78

>4ddp_A Beclin-1; ECD, autophagy, membrane binding, membrane protein; 1.55A {Homo sapiens}

Probab=100.00  E-value=3.7e-88  Score=614.10  Aligned_cols=199  Identities=73%  Similarity=1.269  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcccCcceeeeeecCceeeeccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCcccccc
Q psy16001        116 TLELQLQYSLSQLNKFKSTNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRY  195 (318)
Q Consensus       116 ~le~q~~~~~~qLd~L~ktNv~n~~F~I~hdG~fGTINGlRLGrlp~~~V~W~EINAAwGQ~~LLL~~la~kl~~~f~~Y  195 (318)
                      ++|+|++++++|||+|+||||||++|||||||+|||||||||||+|++||+|+||||||||+||||++||+++|++|++|
T Consensus         9 sl~~q~~~~~~~L~~L~~tNv~n~~F~I~hdG~fgtINglRLGrlp~~~V~W~EINAAwGq~~LLL~tla~~l~~~f~~y   88 (210)
T 4ddp_A            9 SVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRY   88 (210)
T ss_dssp             CHHHHHHHHHHHHHTC----CCSSCCCEEEETTEEEETTEECCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHTCCCSSE
T ss_pred             HHHHHHHHHHHHHHHHHhcccccceeEEEecCCceeEcccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCccce
Confidence            44899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecCCCceEEecCCC-ceEeccccCCCcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCCceeecc-CCccccCCC
Q psy16001        196 RIVPYGNHSYIEDTTEH-KNLPLFASGGAKFFWDTKFDMAMVAFLDCLQQFKEELEKGDSEFHLPYNMDS-KGKIEDETT  273 (318)
Q Consensus       196 ~LvP~GS~S~I~~~~~~-~~l~Ly~sg~~~~f~~~kFD~AM~afL~cl~q~~~~v~~~~~~~~LPY~I~~-kdkI~D~~~  273 (318)
                      +|+||||+|+|++++++ ++||||++|++++|+++|||.||+|||+||+||++++++++++++|||+|++ ||||+|+++
T Consensus        89 ~L~P~GS~S~I~~~~~~~~~l~Ly~sg~~~~f~~~kFD~Am~afL~cl~q~~~~~~~~~~~~~lPY~I~~~~dkI~D~~~  168 (210)
T 4ddp_A           89 RLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGG  168 (210)
T ss_dssp             EEECCGGGCEEEESSCTTCCEESCCCSSCGGGCCSHHHHHHHHHHHHHHHHHHHHHCC-CCCCCSSCEETTTTEEECTTT
T ss_pred             eEEecCCcceeeEecCCCeEEeceeCCCccccccccccHHHHHHHHHHHHHHHHHhcCCCCCCCCeEEecCCCEecCccC
Confidence            99999999999999887 8999999999999999999999999999999999999999999999999943 999999876


Q ss_pred             -CCceeEEecCCCcchHHHHHHHHHHHHHHHHHHHhhhcccc
Q psy16001        274 -GNTYSVKYQFNSQEQWTKALKFMLTNLKWGLAWVSSQFKNQ  314 (318)
Q Consensus       274 -g~~~SIr~~~nsee~WTkAlK~mLtNlKw~La~~s~~~~~~  314 (318)
                       |++||||+++|++|+||+||||||||+||+|||+|+|+.+|
T Consensus       169 ~~~~~SIrl~~n~~e~WTkAlK~mLtnlKw~La~~s~~~~~~  210 (210)
T 4ddp_A          169 SGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK  210 (210)
T ss_dssp             TCCEEESCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             CCCceEEEecCCCccHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence             78999999999999999999999999999999999999764

>3vp7_A Vacuolar protein sorting-associated protein 30; targeting, PI3-kinase complex I, PRE-autophagosomal structur protein transport; 2.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-77  Score=547.71  Aligned_cols=173  Identities=40%  Similarity=0.674  Sum_probs=151.9

Q ss_pred             cccCcceeeeeecCceeeeccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCcccccceeeecCCCceEEe-----
Q psy16001        134 TNVFNATFHIWHSGHFGTINNFRLGTLPSAPVDWSEINAAWGQTALLLTALARKLNLTFQRYRIVPYGNHSYIED-----  208 (318)
Q Consensus       134 tNv~n~~F~I~hdG~fGTINGlRLGrlp~~~V~W~EINAAwGQ~~LLL~~la~kl~~~f~~Y~LvP~GS~S~I~~-----  208 (318)
                      |||||++|||||||+|||||||||||+|++||+|+||||||||+||||++||+++|++|++|+|+||||+|+|++     
T Consensus         1 tNV~Nd~F~I~hdg~fgTINglRLGrl~~~~V~W~EINAAwGq~~LLL~tla~kl~~~f~~Y~L~PmGS~S~I~~~~~~~   80 (220)
T 3vp7_A            1 INIFNATFKISHSGPFATINGLRLGSIPESVVPWKEINAALGQLILLLATINKNLKINLVDYELQPMGSFSKIKKRMVNS   80 (220)
T ss_dssp             CCTTTTTCCEEEETTEEEETTEEECCBTTBCCCHHHHHHHHHHHHHHHHHHHHHTTCCCSSEEEECCGGGCEEEEEC---
T ss_pred             CccccceeEEeecCCceeEcccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceEEeCCCcceEeeccccc
Confidence            799999999999999999999999999999999999999999999999999999999999999999999999999     


Q ss_pred             --cCC-------C-ceEeccccCCCc---cccc-ccchHHHHHHHHHHHHHHHHHhcC----------------------
Q psy16001        209 --TTE-------H-KNLPLFASGGAK---FFWD-TKFDMAMVAFLDCLQQFKEELEKG----------------------  252 (318)
Q Consensus       209 --~~~-------~-~~l~Ly~sg~~~---~f~~-~kFD~AM~afL~cl~q~~~~v~~~----------------------  252 (318)
                        +++       + .+||||++|+++   +|++ +|||+||+|||+||+||++++++.                      
T Consensus        81 ~~~~~~~~~~~~~~~~l~Ly~s~~~~lg~~f~~~~kFD~aMvafL~cl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (220)
T 3vp7_A           81 VEYNNSTTNAPGDWLILPVYYDENFNLGRIFRKETKFDKSLETTLEIISEITRQLSTIASSYSSQTLTTSQDESSMNNAN  160 (220)
T ss_dssp             ------------CEEEEESSCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred             ccccccccccCCCCeEEecccCCCcccccccccccchhHHHHHHHHHHHHHHHHHHhcCccccccccccccccccccccc
Confidence              443       2 689999999985   4754 699999999999999999998752                      


Q ss_pred             ----C-CCCCCceeeccCCccccCCCCCceeEEecC-CCcchHHHHHHHHHHHHHHHHHHHhhhccc
Q psy16001        253 ----D-SEFHLPYNMDSKGKIEDETTGNTYSVKYQF-NSQEQWTKALKFMLTNLKWGLAWVSSQFKN  313 (318)
Q Consensus       253 ----~-~~~~LPY~I~~kdkI~D~~~g~~~SIr~~~-nsee~WTkAlK~mLtNlKw~La~~s~~~~~  313 (318)
                          + ++++|||+|+ +|||+      ++|||+++ |++|+|||||||||||+||+|||+|+++.+
T Consensus       161 ~~~~~~~~l~LPY~I~-~DkI~------g~SIkl~~~~~~e~WTkAlK~~LtnlKwlLa~~S~~~~~  220 (220)
T 3vp7_A          161 DVENSTSILELPYIMN-KDKIN------GLSVKLHGSSPNLEWTTAMKFLLTNVKWLLAFSSNLLSK  220 (220)
T ss_dssp             --------CCCSSCEE-TTEET------TEESCCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             cccCCCCcccCCeEee-CCcCC------CEEEEeecCCCccHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence                1 2499999999 99995      58999998 578999999999999999999999999853

>2p1l_B Beclin 1; apoptosis, autophagy, BH3 domain, BCL; 2.50A {Homo sapiens} PDB: 3dvu_C 2pon_A

Probab=98.56  E-value=1.5e-08  Score=66.61  Aligned_cols=27  Identities=33%  Similarity=0.701  Sum_probs=18.7

Q ss_pred             CCCcchHHHHHHHHHHhhcCCCCCccC
Q psy16001         57 SNSKGHQMKVYANLFDFLSSNSGIDHP   83 (318)
Q Consensus        57 ~~~ls~~~~~~~~lFdilS~~s~iDhP   83 (318)
                      .+++|++++++++||||||++++||||
T Consensus         5 ~~~ls~~~~~~~~lFdILS~~sdIDhP   31 (31)
T 2p1l_B            5 MENLSRRLKVTGDLFDIMSGQTDVDHP   31 (31)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC-------
T ss_pred             cccHHHHHHHHHHHHHHHhCCCcCCCC
Confidence            467999999999999999999999999

>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}

Probab=93.78  E-value=0.15  Score=40.67  Aligned_cols=17  Identities=41%  Similarity=0.608  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy16001        118 ELQLQYSLSQLNKFKST  134 (318)
Q Consensus       118 e~q~~~~~~qLd~L~kt  134 (318)
                      ++||.|++.||++|+|.
T Consensus        80 ~~q~~~~~~qLdkL~K~   96 (96)
T 3q8t_A           80 ENQMRYAQMQLDKLKKK   96 (96)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhhcC
Confidence            79999999999999973

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00