Psyllid ID: psy16017

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEENR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEcccccHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEcccccHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mplftrkpkkddhlldnnnvgehkskiyngtkspapvtedskpklifhcqlahgsptglisGFSNVRELYQKIAECyefpaeenr
Flexible Loop (DISEMBL)
mplftrkpkkddhlldnnnvgehkskiyngtkspaPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAEcyefpaeenr
Low Complexity Region (SEG)
MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEENR
Disordered region (IsUnstruct)
*******************************************KLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEF******
Disordered Region (DISOPRED)
*********************************************IFHCQLAHGSPTGLISGFSNVRELYQKIAECY*FP*****
Disordered Region (DISEMBL)
MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEENR
Disordered Region (DISPRO)
****************************************SKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFP*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEENR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q9Z254	333	PDZ domain-containing pro	yes	N/A	0.976	0.249	0.406	4e-12
Q9Z0G0	333	PDZ domain-containing pro	yes	N/A	0.976	0.249	0.375	7e-10
Q8R5M0	297	PDZ domain-containing pro	no	N/A	0.588	0.168	0.537	2e-09
O14908	333	PDZ domain-containing pro	yes	N/A	0.447	0.114	0.657	5e-09
Q1JQD4	313	PDZ domain-containing pro	no	N/A	0.917	0.249	0.423	3e-08
Q8TF64	312	PDZ domain-containing pro	no	N/A	0.458	0.125	0.641	6e-08
Q8TF65	315	PDZ domain-containing pro	no	N/A	0.470	0.126	0.525	1e-06
Q9Z2H7	314	PDZ domain-containing pro	no	N/A	0.682	0.184	0.444	2e-06
Q498D9	314	PDZ domain-containing pro	no	N/A	0.917	0.248	0.376	6e-06

>sp|Q9Z254|GIPC1_RAT PDZ domain-containing protein GIPC1 OS=Rattus norvegicus GN=Gipc1 PE=1 SV=2

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 13/96 (13%)

Query: 1  MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSP-------------APVTEDSKPKLIF 47
          MPL   + KK   L++N      +S +  G   P              P     +P+L+F
Sbjct: 1  MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASLRPRLVF 60

Query: 48 HCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          H QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct: 61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

May be involved in G protein-linked signaling.
Rattus norvegicus (taxid: 10116)

>sp|Q9Z0G0|GIPC1_MOUSE PDZ domain-containing protein GIPC1 OS=Mus musculus GN=Gipc1 PE=1 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 13/96 (13%)

Query: 1  MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVTEDSKPKL-------------IF 47
          MPL   + KK   L++N      +S +  G   P   +   + ++             +F
Sbjct: 1  MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSAAGESQMGLPPPPAALRPRLVF 60

Query: 48 HCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          H QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct: 61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

Inhibits endothelial cell migartion (in vitro). May be involved in G protein-linked signaling.

Mus musculus (taxid: 10090)

>sp|Q8R5M0|GIPC3_MOUSE PDZ domain-containing protein GIPC3 OS=Mus musculus GN=Gipc3 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 4/54 (7%)

Query: 30 GTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           T+ PA     ++P+L+F  QLAHGSPTG I GF+NVRELY KIAE +     E
Sbjct: 11 ATEPPA----RARPRLVFRTQLAHGSPTGRIEGFTNVRELYAKIAEAFGIAPTE 60

Required for postnatal maturation of the hair bundle and long-term survival of hair cells and spiral ganglion.

Mus musculus (taxid: 10090)

>sp|O14908|GIPC1_HUMAN PDZ domain-containing protein GIPC1 OS=Homo sapiens GN=GIPC1 PE=1 SV=2

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/38 (65%), Positives = 29/38 (76%)

Query: 46 IFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          +FH QLAHGSPTG I GF+NV+ELY KIAE +  P  E
Sbjct: 59 VFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAE 96

May be involved in G protein-linked signaling.

Homo sapiens (taxid: 9606)

>sp|Q1JQD4|GIPC2_BOVIN PDZ domain-containing protein GIPC2 OS=Bos taurus GN=GIPC2 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 1  MPLFTRKPKKDDHLLDNNNV-GEHKSKIYNGTKSP-APVTEDSKPKLIFHCQLAHGSPTG 58
          MPL  R+ KK +    +  V GEH         SP AP       +L+FH QLAHGS TG
Sbjct: 1  MPLGLRRKKKFNTKETSRLVEGEHTDAAVRSLPSPPAPAR-----RLVFHTQLAHGSATG 55

Query: 59 LISGFSNVRELYQKIAECYEFPAEE 83
           +  FS+++ELY KIA  +E P  E
Sbjct: 56 RVENFSSIQELYAKIAGVFEIPPSE 80

Bos taurus (taxid: 9913)

>sp|Q8TF64|GIPC3_HUMAN PDZ domain-containing protein GIPC3 OS=Homo sapiens GN=GIPC3 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/39 (64%), Positives = 28/39 (71%)

Query: 45 LIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          L+F  QLAHGSPTG I GF+NVRELY KIAE +     E
Sbjct: 37 LVFRTQLAHGSPTGKIEGFTNVRELYAKIAEAFGIAPTE 75

Required for postnatal maturation of the hair bundle and long-term survival of hair cells and spiral ganglion.

Homo sapiens (taxid: 9606)

>sp|Q8TF65|GIPC2_HUMAN PDZ domain-containing protein GIPC2 OS=Homo sapiens GN=GIPC2 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 44 KLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          +L+FH QLAHGS TG + GFS+++ELY +IA  +E    E
Sbjct: 41 RLVFHAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSE 80

Homo sapiens (taxid: 9606)

>sp|Q9Z2H7|GIPC2_MOUSE PDZ domain-containing protein GIPC2 OS=Mus musculus GN=Gipc2 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 5/63 (7%)

Query: 21 GEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFP 80
          GE  S        PAP       KL+FH QLAHGS TG +  FS++ ELY KIA  +E  
Sbjct: 23 GERSSGSQGVPGPPAPAR-----KLVFHAQLAHGSATGRVEDFSSISELYAKIAGVFEIA 77

Query: 81 AEE 83
            E
Sbjct: 78 PSE 80

Mus musculus (taxid: 10090)

>sp|Q498D9|GIPC2_RAT PDZ domain-containing protein GIPC2 OS=Rattus norvegicus GN=Gipc2 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 1  MPLFTRKPKKDDHLLDNNNV--GEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTG 58
          MPL  R  KK     +   +  GE           PAP       +L+FH QLAHGS TG
Sbjct: 1  MPLGLRGKKKAAKSKETARLVEGERSGGSQGVPGPPAPAR-----RLVFHAQLAHGSATG 55

Query: 59 LISGFSNVRELYQKIAECYEFPAEE 83
           +  FS++ ELY KIA  +E    E
Sbjct: 56 RVEDFSSISELYAKIAGVFEIAPSE 80

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
195153797	343	GL17375 [Drosophila persimilis] gi|19845	0.976	0.241	0.474	7e-15
307186593	834	Succinyl-CoA:3-ketoacid-coenzyme A trans	0.482	0.049	0.878	7e-15
158285226	342	AGAP007674-PB [Anopheles gambiae str. PE	0.941	0.233	0.466	1e-14
307196399	378	PDZ domain-containing protein GIPC1 [Har	0.494	0.111	0.857	1e-14
91091102	315	PREDICTED: similar to RGS-GAIP interacti	0.729	0.196	0.608	4e-14
383864095	349	PREDICTED: PDZ domain-containing protein	0.505	0.123	0.813	7e-14
350402191	344	PREDICTED: PDZ domain-containing protein	0.494	0.122	0.809	8e-14
340726871	344	PREDICTED: LOW QUALITY PROTEIN: PDZ doma	0.494	0.122	0.809	9e-14
380020563	345	PREDICTED: LOW QUALITY PROTEIN: PDZ doma	0.505	0.124	0.813	1e-13
332022943	469	PDZ domain-containing protein GIPC1 [Acr	0.6	0.108	0.727	1e-13

>gi|195153797|ref|XP_002017810.1| GL17375 [Drosophila persimilis] gi|198458102|ref|XP_001360911.2| GA11060 [Drosophila pseudoobscura pseudoobscura] gi|194113606|gb|EDW35649.1| GL17375 [Drosophila persimilis] gi|198136222|gb|EAL25486.2| GA11060 [Drosophila pseudoobscura pseudoobscura]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 14/97 (14%)

Query: 1  MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVT--------------EDSKPKLI 46
          MPLFTRK  K     DN +   + S    G  S  P T              + SKP L+
Sbjct: 1  MPLFTRKTTKPGSAADNASQNSNNSDGGKGRASGGPATIQNNNNNNNNNSSPDYSKPPLV 60

Query: 47 FHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
          FHCQLAHGSPTGLI  FS+VRELYQKIAEC++   ++
Sbjct: 61 FHCQLAHGSPTGLIHDFSSVRELYQKIAECFDISEKD 97

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186593|gb|EFN72110.1| Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial [Camponotus floridanus]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 38/41 (92%)

Query: 43  PKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           P L+FHCQLAHGSPTGLIS FSNVRELYQKIAECY+ PAEE
Sbjct: 71  PSLVFHCQLAHGSPTGLISDFSNVRELYQKIAECYDLPAEE 111

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158285226|ref|XP_308197.4| AGAP007674-PB [Anopheles gambiae str. PEST] gi|158285228|ref|XP_001687864.1| AGAP007674-PA [Anopheles gambiae str. PEST] gi|157019890|gb|EAA04121.4| AGAP007674-PB [Anopheles gambiae str. PEST] gi|157019891|gb|EDO64513.1| AGAP007674-PA [Anopheles gambiae str. PEST]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 60/103 (58%), Gaps = 23/103 (22%)

Query: 1   MPLFTRKPKK----------DDHLL-DNNNVGE---------HKSKIYNGTKSPAPVTED 40
           MPLF +K  K          D H   DNNN            H   + NG    + VT  
Sbjct: 1   MPLFNKKSTKISNPSPPMTKDPHAYHDNNNYKNPPIPTAPTIHHDSMSNGGHGESTVT-- 58

Query: 41  SKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
            KP+L+F+CQLAHGSPTG I+GF++V+ELYQKIAECY+FP +E
Sbjct: 59  -KPQLVFNCQLAHGSPTGFITGFASVKELYQKIAECYDFPMDE 100

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196399|gb|EFN77988.1| PDZ domain-containing protein GIPC1 [Harpegnathos saltator]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 38/42 (90%)

Query: 42  KPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           KP L+FHCQLAHGSP GLIS FSNVRELYQKIAECY+ PAEE
Sbjct: 98  KPSLVFHCQLAHGSPMGLISDFSNVRELYQKIAECYDLPAEE 139

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091102|ref|XP_968698.1| PREDICTED: similar to RGS-GAIP interacting protein GIPC [Tribolium castaneum] gi|270013145|gb|EFA09593.1| hypothetical protein TcasGA2_TC011711 [Tribolium castaneum]

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 7/69 (10%)

Query: 15 LDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIA 74
          ++NNNV   KSK+      P+PV+  SK  L FHCQLAHGSPT  +SGFSNV+ELYQKIA
Sbjct: 17 VENNNV--VKSKV-----PPSPVSPISKASLQFHCQLAHGSPTVFVSGFSNVKELYQKIA 69

Query: 75 ECYEFPAEE 83
          EC++FP  E
Sbjct: 70 ECFDFPPSE 78

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864095|ref|XP_003707515.1| PREDICTED: PDZ domain-containing protein GIPC1-like [Megachile rotundata]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/43 (81%), Positives = 39/43 (90%)

Query: 41  SKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           S+ +L+FHCQLAHGSPTGLISGFSNVRELYQKIAECY+   EE
Sbjct: 68  SRTRLVFHCQLAHGSPTGLISGFSNVRELYQKIAECYDLSMEE 110

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350402191|ref|XP_003486399.1| PREDICTED: PDZ domain-containing protein GIPC1-like [Bombus impatiens]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 39/42 (92%)

Query: 42  KPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           KP L+F+CQLAHGSPTGLISGF+NVRELYQKIA+CY+ P EE
Sbjct: 64  KPPLVFYCQLAHGSPTGLISGFNNVRELYQKIADCYDIPMEE 105

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726871|ref|XP_003401775.1| PREDICTED: LOW QUALITY PROTEIN: PDZ domain-containing protein GIPC1-like [Bombus terrestris]

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 39/42 (92%)

Query: 42  KPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           KP L+F+CQLAHGSPTGLISGF+NVRELYQKIA+CY+ P EE
Sbjct: 64  KPPLVFYCQLAHGSPTGLISGFNNVRELYQKIADCYDIPMEE 105

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020563|ref|XP_003694152.1| PREDICTED: LOW QUALITY PROTEIN: PDZ domain-containing protein GIPC1-like [Apis florea]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 38/43 (88%)

Query: 41  SKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
           S P  +FHCQLAHGSPTGLISGF+NVRELYQKIAECY+ P EE
Sbjct: 64  SNPLPVFHCQLAHGSPTGLISGFNNVRELYQKIAECYDIPIEE 106

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022943|gb|EGI63209.1| PDZ domain-containing protein GIPC1 [Acromyrmex echinatior]

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 44/55 (80%), Gaps = 4/55 (7%)

Query: 31  TKSPAPVTEDSKPK-LIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEEN 84
           T+SP     D +P  L+FHCQLAHGSPTGLIS FSNVRELYQKIAE Y+ PAEEN
Sbjct: 94  TRSPP---RDPRPSTLVFHCQLAHGSPTGLISDFSNVRELYQKIAERYDLPAEEN 145

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
FB|FBgn0010504	336	kermit "kermit" [Drosophila me	0.976	0.247	0.461	1.2e-15
ZFIN|ZDB-GENE-040426-921	328	gipc2 "GIPC PDZ domain contain	0.952	0.246	0.461	1.5e-14
ZFIN|ZDB-GENE-060726-1	335	gipc1 "GIPC PDZ domain contain	0.776	0.197	0.536	2.9e-12
UNIPROTKB|E1BJQ7	333	GIPC1 "Uncharacterized protein	0.6	0.153	0.574	3.7e-11
UNIPROTKB|E2R071	333	GIPC1 "Uncharacterized protein	0.6	0.153	0.574	3.7e-11
RGD|68338	333	Gipc1 "GIPC PDZ domain contain	0.976	0.249	0.406	3.7e-11
MGI|MGI:1926252	333	Gipc1 "GIPC PDZ domain contain	0.494	0.126	0.666	6.1e-11
ZFIN|ZDB-GENE-060616-326	333	zgc:136839 "zgc:136839" [Danio	0.717	0.183	0.516	7.9e-11
UNIPROTKB|O14908	333	GIPC1 "PDZ domain-containing p	0.6	0.153	0.555	1e-10
UNIPROTKB|Q1JQD4	313	GIPC2 "PDZ domain-containing p	0.917	0.249	0.423	2.4e-09

FB|FBgn0010504 kermit "kermit" [Drosophila melanogaster (taxid:7227)]

 Score = 199 (75.1 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 42/91 (46%), Positives = 57/91 (62%)

Query:     1 MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPAPVT--------EDSKPKLIFHCQLA 52
             MPLFTRK  K     D  +    +S + +G+   + ++        E +KP L+FHCQLA
Sbjct:     1 MPLFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSIPEKTKPPLVFHCQLA 60

Query:    53 HGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             HGSPTGLI  FS+VRELYQKIAEC++   ++
Sbjct:    61 HGSPTGLIHDFSSVRELYQKIAECFDISEKD 91

GO:0009966 "regulation of signal transduction" evidence=ISS

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

ZFIN|ZDB-GENE-040426-921 gipc2 "GIPC PDZ domain containing family, member 2" [Danio rerio (taxid:7955)]

 Score = 189 (71.6 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 42/91 (46%), Positives = 55/91 (60%)

Query:     1 MPLFTRKPK----KDDHLLDNNNVGEH----KSKIYNGTKSPAPVTEDSKPKLIFHCQLA 52
             MPL  RK K    +  +L++N  +G H    KS +  G   P P +   +PKL+FH QLA
Sbjct:     1 MPLGLRKKKNKSRESSNLVENEEIGGHAVVGKSAVNGGGLPPPPAS--LRPKLVFHTQLA 58

Query:    53 HGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             HGSPTG I GF+NV+ELY KIAE +    +E
Sbjct:    59 HGSPTGRIEGFTNVKELYNKIAEAFNLSPDE 89

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-060726-1 gipc1 "GIPC PDZ domain containing family, member 1" [Danio rerio (taxid:7955)]

 Score = 169 (64.5 bits), Expect = 2.9e-12, P = 2.9e-12
 Identities = 37/69 (53%), Positives = 42/69 (60%)

Query:    15 LDNNNVGEHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIA 74
             LD   VG  +   + G   P P T   +P+LIFH QLAHGSPTG I GFSNVRELY KI 
Sbjct:    35 LDGGRVGLGEGAAHEGL--PPPPTS-LRPRLIFHTQLAHGSPTGRIEGFSNVRELYAKIG 91

Query:    75 ECYEFPAEE 83
             E +  P  E
Sbjct:    92 EAFGIPPTE 100

GO:0005622 "intracellular" evidence=IMP

GO:0004707 "MAP kinase activity" evidence=IMP

GO:0001525 "angiogenesis" evidence=IMP

GO:0048844 "artery morphogenesis" evidence=IMP

GO:0048845 "venous blood vessel morphogenesis" evidence=IMP

UNIPROTKB|E1BJQ7 GIPC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 159 (61.0 bits), Expect = 3.7e-11, P = 3.7e-11
 Identities = 31/54 (57%), Positives = 37/54 (68%)

Query:    30 GTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             G   P P     +P+L+FH QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct:    46 GLPPPPPAL---RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

GO:0048167 "regulation of synaptic plasticity" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031647 "regulation of protein stability" evidence=IEA

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0017022 "myosin binding" evidence=IEA

GO:0014047 "glutamate secretion" evidence=IEA

GO:0012506 "vesicle membrane" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0007268 "synaptic transmission" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|E2R071 GIPC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 159 (61.0 bits), Expect = 3.7e-11, P = 3.7e-11
 Identities = 31/54 (57%), Positives = 37/54 (68%)

Query:    30 GTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             G   P P     +P+L+FH QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct:    46 GLPPPPPAL---RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

GO:0048167 "regulation of synaptic plasticity" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0031647 "regulation of protein stability" evidence=IEA

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA

GO:0017022 "myosin binding" evidence=IEA

GO:0014047 "glutamate secretion" evidence=IEA

GO:0012506 "vesicle membrane" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0007268 "synaptic transmission" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

RGD|68338 Gipc1 "GIPC PDZ domain containing family, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 159 (61.0 bits), Expect = 3.7e-11, P = 3.7e-11
 Identities = 39/96 (40%), Positives = 50/96 (52%)

Query:     1 MPLFTRKPKKDDHLLDNNNVGEHKSKIYNGTKSPA-------------PVTEDSKPKLIF 47
             MPL   + KK   L++N      +S +  G   P              P     +P+L+F
Sbjct:     1 MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASLRPRLVF 60

Query:    48 HCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             H QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct:    61 HTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

GO:0003779 "actin binding" evidence=IEA;ISO

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005903 "brush border" evidence=IDA

GO:0005938 "cell cortex" evidence=IEA;ISO

GO:0006605 "protein targeting" evidence=IEA;ISO

GO:0007268 "synaptic transmission" evidence=IEA;ISO

GO:0008021 "synaptic vesicle" evidence=IEA;ISO

GO:0012506 "vesicle membrane" evidence=IEA;ISO

GO:0014047 "glutamate secretion" evidence=IEA;ISO

GO:0016020 "membrane" evidence=ISO;IDA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=ISO

GO:0017022 "myosin binding" evidence=IEA;ISO

GO:0030139 "endocytic vesicle" evidence=IDA

GO:0030165 "PDZ domain binding" evidence=IPI

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IEA;ISO

GO:0031647 "regulation of protein stability" evidence=IEA;ISO

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0043197 "dendritic spine" evidence=IEA;ISO

GO:0043198 "dendritic shaft" evidence=IEA;ISO

GO:0043542 "endothelial cell migration" evidence=IEA;ISO

GO:0044445 "cytosolic part" evidence=IDA

GO:0048167 "regulation of synaptic plasticity" evidence=IEA;ISO

MGI|MGI:1926252 Gipc1 "GIPC PDZ domain containing family, member 1" [Mus musculus (taxid:10090)]

 Score = 157 (60.3 bits), Expect = 6.1e-11, P = 6.1e-11
 Identities = 28/42 (66%), Positives = 34/42 (80%)

Query:    42 KPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             +P+L+FH QLAHGSPTG I GF+NV+ELY KIAE +  PA E
Sbjct:    55 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAE 96

GO:0003779 "actin binding" evidence=IPI

GO:0005096 "GTPase activator activity" evidence=TAS

GO:0005102 "receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005903 "brush border" evidence=ISO

GO:0005938 "cell cortex" evidence=ISO

GO:0006605 "protein targeting" evidence=IMP;IPI

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=TAS

GO:0007268 "synaptic transmission" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0012506 "vesicle membrane" evidence=IDA

GO:0014047 "glutamate secretion" evidence=IMP

GO:0016020 "membrane" evidence=ISO;IDA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=ISO

GO:0017022 "myosin binding" evidence=IPI

GO:0030139 "endocytic vesicle" evidence=ISO

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IDA

GO:0031647 "regulation of protein stability" evidence=IDA

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0043197 "dendritic spine" evidence=IDA

GO:0043198 "dendritic shaft" evidence=IDA

GO:0043542 "endothelial cell migration" evidence=IMP

GO:0044445 "cytosolic part" evidence=ISO

GO:0048167 "regulation of synaptic plasticity" evidence=IMP

ZFIN|ZDB-GENE-060616-326 zgc:136839 "zgc:136839" [Danio rerio (taxid:7955)]

 Score = 156 (60.0 bits), Expect = 7.9e-11, P = 7.9e-11
 Identities = 32/62 (51%), Positives = 40/62 (64%)

Query:    22 EHKSKIYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEF-P 80
             E +S + +    P       +PKL+FH QLAHGSPTG I GF+NVRELY KIAE +   P
Sbjct:    36 ESQSTVPSAPPLPPDAAPCPRPKLVFHTQLAHGSPTGRIHGFTNVRELYAKIAEVFNISP 95

Query:    81 AE 82
             +E
Sbjct:    96 SE 97

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|O14908 GIPC1 "PDZ domain-containing protein GIPC1" [Homo sapiens (taxid:9606)]

 Score = 155 (59.6 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 30/54 (55%), Positives = 36/54 (66%)

Query:    30 GTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELYQKIAECYEFPAEE 83
             G   P P     +P+L+FH QLAHGSPTG I GF+NV+ELY KIAE +  P  E
Sbjct:    46 GLPPPPPAL---RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAE 96

GO:0005903 "brush border" evidence=IEA

GO:0030139 "endocytic vesicle" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0044445 "cytosolic part" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=NAS

GO:0005938 "cell cortex" evidence=IDA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0005829 "cytosol" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0016020 "membrane" evidence=ISS

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0031647 "regulation of protein stability" evidence=ISS

GO:0032435 "negative regulation of proteasomal ubiquitin-dependent protein catabolic process" evidence=ISS

GO:0003779 "actin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006605 "protein targeting" evidence=ISS

GO:0007268 "synaptic transmission" evidence=ISS

GO:0012506 "vesicle membrane" evidence=ISS

GO:0014047 "glutamate secretion" evidence=ISS

GO:0017022 "myosin binding" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043198 "dendritic shaft" evidence=ISS

GO:0043542 "endothelial cell migration" evidence=ISS

GO:0048167 "regulation of synaptic plasticity" evidence=ISS

GO:0008021 "synaptic vesicle" evidence=ISS

GO:0043197 "dendritic spine" evidence=ISS

UNIPROTKB|Q1JQD4 GIPC2 "PDZ domain-containing protein GIPC2" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 36/85 (42%), Positives = 46/85 (54%)

Query:     1 MPLFTRKPKKDDHLLDNNNV-GEHKSKIYNGTKSP-APVTEDSKPKLIFHCQLAHGSPTG 58
             MPL  R+ KK +    +  V GEH         SP AP       +L+FH QLAHGS TG
Sbjct:     1 MPLGLRRKKKFNTKETSRLVEGEHTDAAVRSLPSPPAPAR-----RLVFHTQLAHGSATG 55

Query:    59 LISGFSNVRELYQKIAECYEFPAEE 83
              +  FS+++ELY KIA  +E P  E
Sbjct:    56 RVENFSSIQELYAKIAGVFEIPPSE 80

GO:0005737 "cytoplasm" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O14908	GIPC1_HUMAN	No assigned EC number	0.6578	0.4470	0.1141	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
KOG3938|consensus	334		99.95

>KOG3938|consensus

Probab=99.95  E-value=6.3e-28  Score=191.46  Aligned_cols=83  Identities=43%  Similarity=0.717  Sum_probs=63.0

Q ss_pred             CCCccCCCCCCCCCCCCCCcCCCCcc----------cccCCCCCCCCCCCCCCceeeeeecccCCCceeccCccchHHHH
Q psy16017          1 MPLFTRKPKKDDHLLDNNNVGEHKSK----------IYNGTKSPAPVTEDSKPKLIFHCQLAHGSPTGLISGFSNVRELY   70 (85)
Q Consensus         1 m~l~~~k~~k~~~~~~~~~~~~~~~~----------~~~g~~~~~p~~~~~~p~LvFh~QLAHGSptg~I~gFsnvkELY   70 (85)
                      |||+.++-+|.-.......--+-.|.          +.++.+ ..+.++..+|+||||||||||||||+|+||+||+|||
T Consensus         1 M~~~~~~~~k~~~~~~~~~a~~~rs~e~~p~~~~~~~s~~~~-s~s~~~~~~p~LvF~~QLAHGSptg~Ie~fsnv~ELY   79 (334)
T KOG3938|consen    1 MPLQGRPSPKSRPRSEGRGAFNARSGETSPLQPGVPISPNEG-SPSIPPAVRPRLVFHCQLAHGSPTGRIEGFSNVRELY   79 (334)
T ss_pred             CCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCccCC-CCCCCccCCCceeEeeeeccCCccceecccccHHHHH
Confidence            89998888776665433222111111          112222 2456789999999999999999999999999999999


Q ss_pred             HhhhhhhcCCCCcC
Q psy16017         71 QKIAECYEFPAEEN   84 (85)
Q Consensus        71 ~kIae~f~i~p~e~   84 (85)
                      ++||+||+|+++|+
T Consensus        80 ~kIAe~F~Is~~dI   93 (334)
T KOG3938|consen   80 QKIAEAFDISPDDI   93 (334)
T ss_pred             HHHHHHhcCCccce
Confidence            99999999999986

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00