Psyllid ID: psy1603

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MQMFQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEccccccEEcccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccEEEccccccEEEEEEcccccccccEEEcccEEcccccccccccccccccccccHHHcHHHHHHHcccHHHHcccHHHHccHHHHccccccccHHHHHccccccHcccccEEcccccHEEEEEEcccccccccc
Coil and Loop (DISEMBL)
MQMFQLALLTCLLVAVqagdypsvayvtpsyahsavgsqsqsvvrsldgnsvhsvyskavdtpfssvrkydsrvsndaiayahapvyhapvysapvvksvapvtyaaapvlkyaapypyhapvvksiahpvayspvayhapvsagvapyavkapyspaavvshvdfdgygvhyaf
Flexible Loop (DISEMBL)
MQMFQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSvyskavdtpfssvRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Low Complexity Region (SEG)
MQMFQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Disordered region (IsUnstruct)
***FQLALLTCLLVAVQAGDYPSVAYVTPSYAHSA****************VHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHY**
Disordered Region (DISOPRED)
***FQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAV***********DGNSV**VY****************RVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYA*
Disordered Region (DISEMBL)
MQMFQLALLTCLLVAVQAGDYPSVAYVTPSY****************DGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Disordered Region (DISPRO)
*QMFQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQMFQLALLTCLLVAVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
P80686	211	Larval/pupal cuticle prot	N/A	N/A	0.702	0.582	0.477	5e-19
Q94804	231	Cuticle protein LPCP-23 O	N/A	N/A	0.708	0.536	0.462	5e-17
P80685	211	Pupal cuticle protein G1A	N/A	N/A	0.685	0.568	0.431	7e-17
P80684	161	Pupal cuticle protein C1B	N/A	N/A	0.337	0.366	0.483	6e-06
P80233	104	Cuticle protein 67, isofo	N/A	N/A	0.251	0.423	0.568	4e-05
P80231	98	Cuticle protein 67, isofo	N/A	N/A	0.251	0.448	0.568	8e-05
P82167	200	Cuticle protein 21.3 OS=L	N/A	N/A	0.297	0.26	0.444	0.0009

>sp|P80686|CUH1C_TENMO Larval/pupal cuticle protein H1C OS=Tenebrio molitor GN=LPCP-22 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 86/157 (54%), Gaps = 34/157 (21%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSA 94
           AVG+  QSVVRSL GN   S YSKAVD+ FSSVRK+D+RV+NDA+A AHAPV     ++A
Sbjct: 73  AVGASHQSVVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRVTNDALAVAHAPVVSTYAHAA 132

Query: 95  PVVKSVAPVTYA-AAPVLK---------------YAAPYPYHAPVVKSIAHPVAYSPVAY 138
           PVV      TYA AAPV+                  A Y  HAPV          +  A 
Sbjct: 133 PVVS-----TYAHAAPVVSSYAAHAPVAAYAAHAPVATYAAHAPV----------ATYAA 177

Query: 139 HAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           HAPV   VA       YSPAAVVSH  F G G  YA+
Sbjct: 178 HAPV---VATRTSAVAYSPAAVVSHASFSGLGASYAW 211

Component of the hard and soft cuticles of the larva and pupa of Tenebrio molitor.
Tenebrio molitor (taxid: 7067)

>sp|Q94804|CU23_TENMO Cuticle protein LPCP-23 OS=Tenebrio molitor GN=LPCP-23 PE=3 SV=2

 Score = 87.4 bits (215), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 93/175 (53%), Gaps = 51/175 (29%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDA---------------- 78
           AVG+  QSVVRSL GN   S YSKAVD+ FSSVRK+D+R++NDA                
Sbjct: 74  AVGASHQSVVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRITNDALLRAHAPVAVAHAAPV 133

Query: 79  ---IAYAHAPVY----HAPVYS-----APVVKSV---APV--TYAA-APVLKYAAPYPYH 120
              +  AHAPV     HAP+ S     AP+V S    AP+  +YAA APVL  A  Y  H
Sbjct: 134 VVHLTAAHAPVVSSYAHAPLVSSYAAHAPLVSSYAAHAPLVSSYAAHAPVLSTA--YAAH 191

Query: 121 APVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           APVV S A PV    VA  A V            YSPAAVVSH  F G G  YA+
Sbjct: 192 APVVSSYAAPV----VARTAAVG-----------YSPAAVVSHTSFTGLGASYAW 231

Component of the cuticle of Tenebrio molitor.

Tenebrio molitor (taxid: 7067)

>sp|P80685|CUG1A_TENMO Pupal cuticle protein G1A OS=Tenebrio molitor PE=1 SV=1

 Score = 86.7 bits (213), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 90/176 (51%), Gaps = 56/176 (31%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAI--------------- 79
           AVG+  Q++VRSL GN   S YSKAVD+ FSSVRK+D+R++NDA+               
Sbjct: 57  AVGASHQAIVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRITNDALLHAPVAVAHAAPVVS 116

Query: 80  ----------AYAHAPVY-----HAPVYS-----APVVKSVAPVTYAAAPVLKYAAPYPY 119
                     +YAHAP+      HAP+ S     AP+V S A    A APVL  A  Y  
Sbjct: 117 TYAAHAPVVSSYAHAPLVSSYAAHAPLVSSYAAHAPLVSSYA----AHAPVLSTA--YAA 170

Query: 120 HAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           HAPVV S A PV    VA  A V            YSPAAVVSH  F G G  YA+
Sbjct: 171 HAPVVSSYAAPV----VARTAAVG-----------YSPAAVVSHTSFTGLGASYAW 211

Component of the cuticle of the pupa of Tenebrio molitor.

Tenebrio molitor (taxid: 7067)

>sp|P80684|CUC1B_TENMO Pupal cuticle protein C1B OS=Tenebrio molitor PE=1 SV=1

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 22 PSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAY 81
          P V+Y  P  A  A+ SQS +++RS       S YSK +DTPFSSVRK D RVSN  + +
Sbjct: 26 PVVSYGAP-LAAPAITSQSSNILRSFGNLGQVSTYSKTIDTPFSSVRKADIRVSNPGVRF 84

Component of the cuticle of the pupa of Tenebrio molitor.

Tenebrio molitor (taxid: 7067)

>sp|P80233|CU67B_LOCMI Cuticle protein 67, isoform B OS=Locusta migratoria PE=1 SV=1

 Score = 47.8 bits (112), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 31/44 (70%)

Query: 38 SQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAY 81
          SQS +++RS       S Y+K VDTP+SSV K D RVSNDAIA+
Sbjct: 40 SQSSNILRSYGNLGQVSTYTKTVDTPYSSVTKSDVRVSNDAIAH 83

Component of the cuticle of migratory locust which contains more than 100 different structural proteins.

Locusta migratoria (taxid: 7004)

>sp|P80231|CU67A_LOCMI Cuticle protein 67, isoform A OS=Locusta migratoria PE=1 SV=1

 Score = 46.6 bits (109), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 31/44 (70%)

Query: 38 SQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAY 81
          SQS +++RS       S Y+K VDTP+SSV K D RVSNDAIA+
Sbjct: 34 SQSSNILRSYGNLGQVSTYTKTVDTPYSSVTKSDVRVSNDAIAH 77

Component of the cuticle of migratory locust which contains more than 100 different structural proteins.

Locusta migratoria (taxid: 7004)

>sp|P82167|CU213_LOCMI Cuticle protein 21.3 OS=Locusta migratoria PE=1 SV=1

 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 2/54 (3%)

Query: 34 SAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSND--AIAYAHAP 85
           AVG+  +S  + L G +  + +SKAVD+P SSVR  +SRVSND  ++ Y   P
Sbjct: 16 GAVGATLESTSKGLGGLNTITQFSKAVDSPTSSVRISNSRVSNDYGSLGYGALP 69

Component of the cuticle of migratory locust which contains more than 100 different structural proteins.

Locusta migratoria (taxid: 7004)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
984255	220	cuticular protein [Tenebrio molitor] gi|	0.748	0.595	0.506	9e-19
3123202	211	RecName: Full=Larval/pupal cuticle prote	0.702	0.582	0.477	2e-17
3121955	231	RecName: Full=Cuticle protein LPCP-23; A	0.708	0.536	0.462	2e-15
1706198	211	RecName: Full=Pupal cuticle protein G1A;	0.685	0.568	0.431	3e-15
91077694	216	PREDICTED: similar to cuticular protein	0.788	0.638	0.506	1e-13
195375752	175	GJ12359 [Drosophila virilis] gi|19415382	0.891	0.891	0.386	9e-11
170034185	205	conserved hypothetical protein [Culex qu	0.788	0.673	0.401	5e-10
125978421	255	GA21149 [Drosophila pseudoobscura pseudo	0.96	0.658	0.334	6e-10
195163001	255	GL26496 [Drosophila persimilis] gi|19410	0.96	0.658	0.334	8e-10
157111650	265	hypothetical protein AaeL_AAEL000890 [Ae	0.84	0.554	0.412	8e-10

>gi|984255|emb|CAA61238.1| cuticular protein [Tenebrio molitor] gi|1587208|prf||2206329A cuticular protein

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 90/158 (56%), Gaps = 27/158 (17%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSA 94
           AVG+  QSVVRSL GN   S YSKAVD+ FSSVRK+D+RV+NDA+A AHAPV     ++A
Sbjct: 73  AVGASHQSVVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRVTNDALAVAHAPVVSTYAHAA 132

Query: 95  PVVKSVAPVTYA-AAPVLK---------------YAAPYPYHAPVVKSIAH-PVAYSPVA 137
           PVV      TYA AAPV+                  A Y  HAPV    AH PVA    A
Sbjct: 133 PVVS-----TYAHAAPVVSSYAAHAPVAAYAAHAPVATYAAHAPVATYAAHAPVA--TYA 185

Query: 138 YHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
            HAPV   VA       YSPAAVVSH  F G G  YA+
Sbjct: 186 AHAPV---VATRTSAVAYSPAAVVSHASFSGLGASYAW 220

Source: Tenebrio molitor

Species: Tenebrio molitor

Genus: Tenebrio

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|3123202|sp|P80686.2|CUH1C_TENMO RecName: Full=Larval/pupal cuticle protein H1C; AltName: Full=TM-PCP H1C; Short=TM-H1C; AltName: Full=TMLPCP-22; Flags: Precursor gi|2281991|emb|CAA70342.1| cuticular protein [Tenebrio molitor]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 86/157 (54%), Gaps = 34/157 (21%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSA 94
           AVG+  QSVVRSL GN   S YSKAVD+ FSSVRK+D+RV+NDA+A AHAPV     ++A
Sbjct: 73  AVGASHQSVVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRVTNDALAVAHAPVVSTYAHAA 132

Query: 95  PVVKSVAPVTYA-AAPVLK---------------YAAPYPYHAPVVKSIAHPVAYSPVAY 138
           PVV      TYA AAPV+                  A Y  HAPV          +  A 
Sbjct: 133 PVVS-----TYAHAAPVVSSYAAHAPVAAYAAHAPVATYAAHAPV----------ATYAA 177

Query: 139 HAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           HAPV   VA       YSPAAVVSH  F G G  YA+
Sbjct: 178 HAPV---VATRTSAVAYSPAAVVSHASFSGLGASYAW 211

Source: Tenebrio molitor

Species: Tenebrio molitor

Genus: Tenebrio

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|3121955|sp|Q94804.2|CU23_TENMO RecName: Full=Cuticle protein LPCP-23; AltName: Full=TMLPCP-23; Flags: Precursor gi|2281990|emb|CAA70341.1| cuticular protein [Tenebrio molitor]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 93/175 (53%), Gaps = 51/175 (29%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDA---------------- 78
           AVG+  QSVVRSL GN   S YSKAVD+ FSSVRK+D+R++NDA                
Sbjct: 74  AVGASHQSVVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRITNDALLRAHAPVAVAHAAPV 133

Query: 79  ---IAYAHAPVY----HAPVYS-----APVVKSV---APV--TYAA-APVLKYAAPYPYH 120
              +  AHAPV     HAP+ S     AP+V S    AP+  +YAA APVL  A  Y  H
Sbjct: 134 VVHLTAAHAPVVSSYAHAPLVSSYAAHAPLVSSYAAHAPLVSSYAAHAPVLSTA--YAAH 191

Query: 121 APVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           APVV S A PV    VA  A V            YSPAAVVSH  F G G  YA+
Sbjct: 192 APVVSSYAAPV----VARTAAVG-----------YSPAAVVSHTSFTGLGASYAW 231

Source: Tenebrio molitor

Species: Tenebrio molitor

Genus: Tenebrio

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|1706198|sp|P80685.1|CUG1A_TENMO RecName: Full=Pupal cuticle protein G1A; AltName: Full=TM-PCP G1A; Short=TM-G1A

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 90/176 (51%), Gaps = 56/176 (31%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAI--------------- 79
           AVG+  Q++VRSL GN   S YSKAVD+ FSSVRK+D+R++NDA+               
Sbjct: 57  AVGASHQAIVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRITNDALLHAPVAVAHAAPVVS 116

Query: 80  ----------AYAHAPVY-----HAPVYS-----APVVKSVAPVTYAAAPVLKYAAPYPY 119
                     +YAHAP+      HAP+ S     AP+V S A    A APVL  A  Y  
Sbjct: 117 TYAAHAPVVSSYAHAPLVSSYAAHAPLVSSYAAHAPLVSSYA----AHAPVLSTA--YAA 170

Query: 120 HAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
           HAPVV S A PV    VA  A V            YSPAAVVSH  F G G  YA+
Sbjct: 171 HAPVVSSYAAPV----VARTAAVG-----------YSPAAVVSHTSFTGLGASYAW 211

Source: Tenebrio molitor

Species: Tenebrio molitor

Genus: Tenebrio

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077694|ref|XP_974760.1| PREDICTED: similar to cuticular protein [Tribolium castaneum] gi|270002202|gb|EEZ98649.1| hypothetical protein TcasGA2_TC001177 [Tribolium castaneum]

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/148 (50%), Positives = 91/148 (61%), Gaps = 10/148 (6%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPV--YHAPVY 92
           A+GS  QSVVRS  GN   S YSKAVD+ FSSVRKYD+R++NDA+A AHAPV   +A   
Sbjct: 72  AIGSSHQSVVRSFGGNQAVSTYSKAVDSAFSSVRKYDTRITNDALAVAHAPVVSTYAAHA 131

Query: 93  SAPVVKSVAPVTYA-AAPVLKYAAPYPYHAPVVKSIAH-PV---AYSPVAYHAPVSAGVA 147
                 +    TYA AAPV+     Y + APVV + AH PV   A++PVA +A  +  VA
Sbjct: 132 PVVAHAAPVVSTYAHAAPVVS---TYAHAAPVVSTYAHAPVATYAHAPVATYAAHAPVVA 188

Query: 148 PYAVKAPYSPAAVVSHVDFDGYGVHYAF 175
             A    YSPAAVVSH  F G G  YA+
Sbjct: 189 TKAAAVAYSPAAVVSHATFSGLGASYAW 216

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195375752|ref|XP_002046664.1| GJ12359 [Drosophila virilis] gi|194153822|gb|EDW69006.1| GJ12359 [Drosophila virilis]

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 33/189 (17%)

Query: 4   FQLALLT-CLLVAVQAGDY----PSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSK 58
           F+  LL+ C L+   +  +    P+     P Y   AVG+  Q+VVRS  G    S YSK
Sbjct: 3   FKYVLLSFCALLGATSAGFLAPAPATYVAQPHY--DAVGTTQQNVVRSFGGTV--STYSK 58

Query: 59  AVDTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYP 118
            V TP+SSV K DSR +N+   Y    VY AP  +A V KSV      AAP + YAAP P
Sbjct: 59  NVVTPYSSVSKVDSRTTNNV--YTPKTVYSAP--AAVVTKSVY-----AAPAVTYAAPAP 109

Query: 119 YHAPVVKSIAHPVAYSPVAYHAPVSAGVAPYAVKA------------PYSPAAVVSHVDF 166
             A  V   A  V Y   A H+PV A        A             YSPA  V+HV F
Sbjct: 110 VLAKTVSYAAPAVTY---AAHSPVIAKTYAAPAVAYAAPAAAPTAYVKYSPAIGVAHVSF 166

Query: 167 DGYGVHYAF 175
           DG+G H+ +
Sbjct: 167 DGFGSHWGY 175

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170034185|ref|XP_001844955.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167875467|gb|EDS38850.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 90/167 (53%), Gaps = 29/167 (17%)

Query: 23  SVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDA---- 78
           +VAY +P     A+GS  +S +R  D    H  +SKAVDT FSSVRK D+R++N+A    
Sbjct: 54  TVAYSSP-----AIGSTHESTIRGHDATVSH--HSKAVDTAFSSVRKSDTRITNEAPKLA 106

Query: 79  ---------IAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAH 129
                      YAHAPV     ++APV      V+YAA  V  YA    + AP V + AH
Sbjct: 107 YTSYAAPALTTYAHAPVA-TYAHAAPVATYAKQVSYAAPAVTTYA----HAAPAVATYAH 161

Query: 130 PVAYSPVAYHAPVSAGVAPYAVKA-PYSPAAVVSHVDFDGYGVHYAF 175
               +PVA +A  +  VA +A K   YSPA  V+HV ++G   HYA+
Sbjct: 162 A---APVATYAHAAPVVAAHATKTLTYSPAVEVAHVSYEGAHAHYAW 205

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125978421|ref|XP_001353243.1| GA21149 [Drosophila pseudoobscura pseudoobscura] gi|54641997|gb|EAL30746.1| GA21149 [Drosophila pseudoobscura pseudoobscura]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 104/257 (40%), Gaps = 89/257 (34%)

Query: 4   FQLALLTCLLVA-VQAGDYPS-VAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVD 61
           F+  +  C LVA  QAG   S VA   PS    AV S  Q+VVRS  G    S YSKAVD
Sbjct: 3   FRYLITLCALVAYAQAGLLASHVAVANPSV--DAVASTQQNVVRSFAGTV--SSYSKAVD 58

Query: 62  TPFSSVRKYDSRVSND-----------------------AIAYAHAPVYHAPVYSAP--- 95
           TP+SSVRK D+R+ N+                       A    HAPV    VY+AP   
Sbjct: 59  TPYSSVRKSDTRIQNNVYTPAVAKTTYAAPLYTQATPVVAKTLVHAPVVQKTVYAAPAPV 118

Query: 96  VVKSV---------------APVTYAAAPVLK---YAAPYPYHAPVVKSIAH-------- 129
           + K+V                 V  A APVL    Y+AP P  A  V S           
Sbjct: 119 LAKTVYSAPAPVYAPAPVYAKTVYSAPAPVLAKTVYSAPAPVLAKTVYSAPAPVYAPAPV 178

Query: 130 ----------PVAYSPVAYHAPVSA-------------------GVAPY--AVKAPYSPA 158
                     PV    V+Y AP++                    GV+ Y  A    YSPA
Sbjct: 179 VAKAVYAAPAPVLAKTVSYAAPLATTNVNHGPSATTYTHNAPALGVSSYGSAQTVQYSPA 238

Query: 159 AVVSHVDFDGYGVHYAF 175
             VSH+ FDG+G H+ F
Sbjct: 239 TSVSHMSFDGFGTHWGF 255

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195163001|ref|XP_002022342.1| GL26496 [Drosophila persimilis] gi|194104303|gb|EDW26346.1| GL26496 [Drosophila persimilis]

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 104/257 (40%), Gaps = 89/257 (34%)

Query: 4   FQLALLTCLLVA-VQAGDYPS-VAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVD 61
           F+  +  C LVA  QAG   S VA   PS    AV S  Q+VVRS  G    S YSKAVD
Sbjct: 3   FRYLITLCALVAYAQAGLLASHVAVANPSV--DAVASTQQNVVRSFAGTV--SSYSKAVD 58

Query: 62  TPFSSVRKYDSRVSND-----------------------AIAYAHAPVYHAPVYSAP--- 95
           TP+SSVRK D+R+ N+                       A    HAPV    VY+AP   
Sbjct: 59  TPYSSVRKSDTRIQNNVYTPAVAKTTYAAPLYTQATPVVAKTLVHAPVVQKTVYAAPAPV 118

Query: 96  VVKSV---------------APVTYAAAPVLK---YAAPYPYHAPVVKSIAH-------- 129
           + K+V                 V  A APVL    Y+AP P  A  V S           
Sbjct: 119 LAKAVYSAPAPVYAPAPVYAKTVYSAPAPVLAKTVYSAPAPVLAKTVYSAPAPVYAPAPV 178

Query: 130 ----------PVAYSPVAYHAPVSA-------------------GVAPY--AVKAPYSPA 158
                     PV    V+Y AP++                    GV+ Y  A    YSPA
Sbjct: 179 VTKAVYAAPAPVLAKTVSYAAPLATTNVNHGPSATTYTHNAPALGVSSYGSAQTVQYSPA 238

Query: 159 AVVSHVDFDGYGVHYAF 175
             VSH+ FDG+G H+ F
Sbjct: 239 TSVSHMSFDGFGTHWGF 255

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157111650|ref|XP_001651665.1| hypothetical protein AaeL_AAEL000890 [Aedes aegypti] gi|108883839|gb|EAT48064.1| AAEL000890-PA [Aedes aegypti]

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 99/189 (52%), Gaps = 42/189 (22%)

Query: 27  VTPSYAHS--AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDA--IAYA 82
           V  +YA+S  AVGS  +S +RS D    H   SKA+DT FSSVRK D+R++N+A  +AYA
Sbjct: 79  VAKTYAYSSPAVGSTHESTIRSHDATISHQ--SKAIDTAFSSVRKSDTRITNEAPKLAYA 136

Query: 83  H--APVYH----APVYSAPVVKSVAPV--TYA-AAPVLK---YAAP----YPYHAPVVKS 126
              AP  H    APV  A  V   AP   TYA AAP ++   +AAP    Y + AP  ++
Sbjct: 137 SYAAPAVHTSYAAPVAVAKQVSYAAPAYQTYAHAAPAIQTYAHAAPAYQTYSHAAPAYQT 196

Query: 127 IAH--PVAYSPVAYHAP-------VSAGVAPYAVKAP-----------YSPAAVVSHVDF 166
            AH  PV    V+Y AP        +  VA YA  AP           YSPA  V+HV +
Sbjct: 197 YAHAAPVVTKQVSYAAPAIQTYAHAAPAVATYAHAAPVVSAHATKTLTYSPAVEVAHVSY 256

Query: 167 DGYGVHYAF 175
           DG   HY +
Sbjct: 257 DGTHAHYGW 265

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
FB|FBgn0035787	219	CG8543 [Drosophila melanogaste	0.811	0.648	0.436	4.1e-17
FB|FBgn0035788	275	CG8541 [Drosophila melanogaste	0.857	0.545	0.435	2.9e-16
FB|FBgn0035792	197	CG7548 [Drosophila melanogaste	0.885	0.786	0.337	7.4e-11
FB|FBgn0035280	194	Cpr62Bb "Cuticular protein 62B	0.834	0.752	0.337	1.6e-06
FB|FBgn0004780	199	Ccp84Ad "Ccp84Ad" [Drosophila	0.84	0.738	0.329	1.8e-06
ZFIN|ZDB-GENE-070912-73	462	si:ch211-140m22.7 "si:ch211-14	0.588	0.222	0.376	2.8e-06
FB|FBgn0259223	259	CG42323 [Drosophila melanogast	0.897	0.606	0.306	4.9e-06
FB|FBgn0085362	578	Vml "Vitelline membrane-like"	0.788	0.238	0.367	6.7e-06
FB|FBgn0035552	456	CG11350 [Drosophila melanogast	0.822	0.315	0.325	9.7e-06
FB|FBgn0004782	221	Ccp84Ab "Ccp84Ab" [Drosophila	0.748	0.592	0.335	1.2e-05

FB|FBgn0035787 CG8543 [Drosophila melanogaster (taxid:7227)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 69/158 (43%), Positives = 86/158 (54%)

Query:    18 AGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSND 77
             A   P VA V   + + AVG+  Q+VVRS  G +V S YSK V TP+SSV K DSR++N+
Sbjct:    30 AASIPVVAKVAQPH-YDAVGTTQQNVVRSF-GGTV-STYSKNVVTPYSSVSKVDSRITNN 86

Query:    78 AIA----Y-AHAPVYHAPVYSAPVVKSVAPVTYAAAPVLK--YAAPYPYHA---PVV-KS 126
                    Y A APV     Y+A     VA   Y+A PV K  YAAP P +A   PVV K+
Sbjct:    87 VYTPKTLYSAPAPVITKSFYAAAPAPVVAKTVYSA-PVAKAVYAAPAPVYAAPAPVVAKT 145

Query:   127 I-AHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSH 163
             + + PVA +  A  APV +  AP   K  YS  A V H
Sbjct:   146 VYSAPVAKAVYAAPAPVYSAPAPVVAKTVYSAPAPVYH 183

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0035788 CG8541 [Drosophila melanogaster (taxid:7227)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 74/170 (43%), Positives = 89/170 (52%)

Query:     4 FQLALLTCLLVA-VQAGDYPS-VAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVD 61
             F+  +  C LVA   AG   S VA   PS    AV S  Q+VVRS  G +V S YSKAVD
Sbjct:     3 FRYLISLCALVACANAGLLASHVAIANPSV--DAVASTQQNVVRSFAG-TVSS-YSKAVD 58

Query:    62 TPFSSVRKYDSRVSNDAIAYA-HAPVYHA-PVYS--APVVKSVAPVTYAAAPVLK---YA 114
             TP+SSVRK D+R+ N+    A     Y A P+Y+   P+V     + +A APV++   YA
Sbjct:    59 TPYSSVRKSDTRIQNNVYTPAIKTTTYGAAPLYTQATPIVSKT--LVHAPAPVVEKTVYA 116

Query:   115 A-PYPYHAPVVKSIAHPVAYSPVAYHAP--VSAGVAPYAVKAPYS-PAAV 160
             A P P  A  V S   PV    V Y AP  V A  AP   K  YS PA V
Sbjct:   117 AAPAPVLAKTVYSAPAPVVAKHV-YSAPAQVYAPAAPVVAKTVYSAPAPV 165

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0035792 CG7548 [Drosophila melanogaster (taxid:7227)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 60/178 (33%), Positives = 86/178 (48%)

Query:     1 MQMFQLALLTCLLVAVQAGDYPS-VAYVTPSYAHS--AVGSQSQSVVRSLDGNSVHSVYS 57
             M  FQ   +   L+ + A  +   +A  T +YA +  AV    Q+VVRS DG   H  Y+
Sbjct:     1 MAYFQFLSVASSLLLLLAPTWAGLIAQPTITYAGNEHAVAHTQQNVVRSFDGTVSH--YA 58

Query:    58 KAVDTPFSSVRKYDSRVSND----AIA----YAHAPVYHAPVYSAPVVKSVAPVTYAAAP 109
             K++ TP+S V K D+R+SN+    A+A    YA AP   APVY+    +    +   A+P
Sbjct:    59 KSLATPYSQVHKQDTRISNNVYQPAVAKTFSYATAP---APVYTHQAHQEPKNLFTQASP 115

Query:   110 VLKYAAPYPYHAPVVKSIAHPVAYSPVAYHAP--VSAGVAPYAVKAP--YSPAAVVSH 163
             V +  A +     V +  AH    +P  YH P  V +   P  V+AP  Y   A  SH
Sbjct:   116 VYQQDA-HVQTPSVYQQAAH--VQTPSVYHQPAQVQSYHQPGHVEAPSVYQQNAHYSH 170

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0035280 Cpr62Bb "Cuticular protein 62Bb" [Drosophila melanogaster (taxid:7227)]

 Score = 120 (47.3 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 58/172 (33%), Positives = 81/172 (47%)

Query:     6 LALLTCLLVAVQAGDYPSVAYVTPSYAHS-AVGSQSQSVVRSL----DGNSVHSVYSKAV 60
             L+L     VAV    Y    Y  P YA +  V   S   V+S     DG+ V   YS  V
Sbjct:    10 LSLALFASVAVARPGYALDYYDHPKYAFNYGVADHSTGDVKSQHETRDGDVVKGQYS-LV 68

Query:    61 DTPFSSVRKYDSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYH 120
             + P  S+R  D   + D+I   +A V      S P V + A V   A+P++ +     ++
Sbjct:    69 E-PDGSIRTVD--YTADSIHGFNAVV----TKSGPTVHAQAVV---ASPIVAHKPVLTHY 118

Query:   121 AP-VVKSIAHPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVS-HVDFD-GY 169
              P VVK +A PVA++P+   +P     APY  K  Y+PAA    H D+D GY
Sbjct:   119 EPQVVKHVA-PVAHAPLVVASP-----APYVAKH-YAPAAAAPIHYDYDDGY 163

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

FB|FBgn0004780 Ccp84Ad "Ccp84Ad" [Drosophila melanogaster (taxid:7227)]

 Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 51/155 (32%), Positives = 69/155 (44%)

Query:    13 LVAVQAGDY-PSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYD 71
             ++A  A +Y P   Y        ++   S+S V   DG+ V   YS      +    +Y 
Sbjct:    48 VLAKAAEEYDPHPQYKYAYDVQDSLSGDSKSQVEERDGDVVRGEYSLIDADGYKRTVQYT 107

Query:    72 SRVSNDAIAYAHA-PVYHAPVYSAPVVKSVA-PVTYAAAP-VLKYAAPYPYHAPVVKSIA 128
             +   N   A  +  P+  A V  APVVK+VA PV + AAP V  YAAP       V  +A
Sbjct:   108 ADPINGFNAVVNREPLVKA-VAVAPVVKTVAAPVAHYAAPAVAHYAAPAV--VKTVAPVA 164

Query:   129 HPVAYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSH 163
             H  A + V   APV+   AP A    Y+  AV  H
Sbjct:   165 HYAAPAVVKTVAPVAHYAAP-ATYTSYAAPAVAYH 198

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

GO:0032504 "multicellular organism reproduction" evidence=IEP

GO:0005615 "extracellular space" evidence=IDA

ZFIN|ZDB-GENE-070912-73 si:ch211-140m22.7 "si:ch211-140m22.7" [Danio rerio (taxid:7955)]

 Score = 124 (48.7 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 41/109 (37%), Positives = 55/109 (50%)

Query:    62 TPFSSVRKYDSRVSNDA-IAYAHAPVYHA--PVYSA-PVVKSVAPVTYAAAPVLKYAAPY 117
             +P  ++      ++  A +  A APV  A  PV +A PVV++ APV  AAAPV++ A P 
Sbjct:   127 SPVEAISPVAEEIAAAAPVVEAAAPVVEAATPVEAATPVVEAAAPVE-AAAPVVEAATPV 185

Query:   118 PYHAPVVKSIAHPV-AYSPVAYHAPVSAGVAPYAVKAPYSPAAVVSHVD 165
                APVV++ A  V A +PV   APV    AP    AP    A     D
Sbjct:   186 EAAAPVVEAAAPVVEASAPVEADAPVVEAAAPVEADAPVVETAAPVETD 234

GO:0015986 "ATP synthesis coupled proton transport" evidence=IEA

GO:0000276 "mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

FB|FBgn0259223 CG42323 [Drosophila melanogaster (taxid:7227)]

 Score = 120 (47.3 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 56/183 (30%), Positives = 73/183 (39%)

Query:     8 LLTCLLVAVQAGDYPSVAYV--TPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFS 65
             +L  L+  VQA      AY    PS  H++VGS  +  V+   G S  S Y+  V T  S
Sbjct:    10 VLVALIACVQAKPGGPAAYSISAPSVDHASVGSTQEHTVKGHYGQSSQSDYASQVQTAHS 69

Query:    66 SVRKYDSRVSNDA----IA---YAHAPVYH--APVYSAPVVKSVAPVTYAAAPVLKYAAP 116
                   S +SNDA    +A   YA AP +   AP YS       AP   A    + Y   
Sbjct:    70 QSHVQRSSISNDAGLAPVAAHGYAAAPAHAIAAPAYSLGYAGHTAP---AQIQGVAYGGH 126

Query:   117 YPYHAPVVK--SIAHPVAYSPVAYHAPVSAGVAPYAVKA-----PYSPAAVVSHVDFDGY 169
             Y   AP V+   + H +     +     S G+  Y          YS A V+SH    GY
Sbjct:   127 YAASAPAVQISGLGHSLGLGH-SLGLGQSLGLGGYGGYGYGGYGSYSAAPVISH----GY 181

Query:   170 GVH 172
               H
Sbjct:   182 LAH 184

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0085362 Vml "Vitelline membrane-like" [Drosophila melanogaster (taxid:7227)]

 Score = 123 (48.4 bits), Expect = 6.7e-06, P = 6.7e-06
 Identities = 57/155 (36%), Positives = 73/155 (47%)

Query:    15 AVQAGDYPSVAYVTPSYAHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRV 74
             A++A  Y + A   PSY+  A  S S S   S   +   S YS A   P  S  K  S  
Sbjct:   281 ALKAPSYSAPA--APSYSAPAAPSYSSSASPSYS-SPASSSYS-APAAPTYSAPKAQSYS 336

Query:    75 SNDAIAYAHAPVYHAPVYSAPVVKSV-APV--TYAAAPVLKYAAPY-P-YHAPVVKSIAH 129
             +  A +Y+ AP   AP YSAP   S  AP   +Y+A     Y+AP  P Y AP   S + 
Sbjct:   337 APAAPSYS-APA--APSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASSSYSA 393

Query:   130 PVA--YS-PVA--YHAPVSAGVAPYAVKAPYSPAA 159
             P A  YS P A  Y AP S+  +  A  +  +PAA
Sbjct:   394 PAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAA 428

GO:0009950 "dorsal/ventral axis specification" evidence=IGI

GO:0060388 "vitelline envelope" evidence=IDA

GO:0007305 "vitelline membrane formation involved in chorion-containing eggshell formation" evidence=ISM

GO:0008316 "structural constituent of vitelline membrane" evidence=ISM

GO:0035805 "egg coat" evidence=ISM

FB|FBgn0035552 CG11350 [Drosophila melanogaster (taxid:7227)]

 Score = 121 (47.7 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 54/166 (32%), Positives = 75/166 (45%)

Query:     9 LTCLLVAVQAGDY---PSVAYVTPSY--AHSAVGSQSQ-SVVRSLDGNSVHSVYSKAVDT 62
             L C  +A  A D    PS  Y+ P    A + V S S  S   S++ ++  + YS  V++
Sbjct:     5 LFCAFIAAVAADVSHLPSSQYLPPGRGAASAPVASYSAPSQSYSVEASAPVASYSAPVES 64

Query:    63 PFSSVRKYDSRVSNDAIAYAHAPV-YHAPV--YSAPVVKSVAPVTYAAAPVLKYAAP-YP 118
              +S         S  A++YA   V Y AP   YSAP     A    A+AP + YAAP   
Sbjct:    65 SYSVA------ASAPAVSYAAPAVSYAAPAQSYSAPAATYTAA---ASAPAVSYAAPAQS 115

Query:   119 YHAPVVKSIAHPVAYSP-VAYHAPVSAGVAPYAVKAPYSPAAVVSH 163
             Y AP     A   A +P V+Y AP  +  AP A     + A  V++
Sbjct:   116 YSAPAATYTA--AASAPAVSYAAPAQSYSAPAATYTAAASAPAVTY 159

GO:0022008 "neurogenesis" evidence=IMP

FB|FBgn0004782 Ccp84Ab "Ccp84Ab" [Drosophila melanogaster (taxid:7227)]

 Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 48/143 (33%), Positives = 64/143 (44%)

Query:    40 SQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPV--YHAPVYSAPVV 97
             S  V   L G++   V  +  D         D+      + Y   P+  ++A V   P+V
Sbjct:    65 SYGVDDKLTGDNKGQVEERDGDVVRGEYSLIDADGYKRTVQYTADPINGFNAVVNREPLV 124

Query:    98 KSVA--PVTYA-AAPVLKYAAPYPYH--AP-VVKSIAHPVAYSPVAYHAPVSAGVAPYAV 151
             K+VA  PV    AAPV +YAAP   H  AP VVK++A PVA+          A VA YA 
Sbjct:   125 KAVAVAPVVKTVAAPVAQYAAPAVAHYAAPAVVKTVA-PVAHYAAPAVVKTVAPVAHYAA 183

Query:   152 KAPYSPAAVVSHVDFDGYGVHYA 174
              A Y+  A  +H        HYA
Sbjct:   184 PAAYATYAAPTHY---AAPAHYA 203

GO:0008010 "structural constituent of chitin-based larval cuticle" evidence=ISS

GO:0005214 "structural constituent of chitin-based cuticle" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	175
pfam11018	164	pfam11018, Cuticle_3, Pupal cuticle protein C1	2e-06
TIGR02813	2582	TIGR02813, omega_3_PfaA, polyketide-type polyunsat	2e-04

>gnl|CDD|220944 pfam11018, Cuticle_3, Pupal cuticle protein C1

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 64/161 (39%), Positives = 75/161 (46%), Gaps = 20/161 (12%)

Query: 35  AVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAH----------- 83
           AVGS  Q+ VRS  G    S YSKAVDTP+SSVRK D+R+SN+A   A+           
Sbjct: 4   AVGSTHQNTVRSFGGLGTVSHYSKAVDTPYSSVRKSDTRISNNAYQPAYAKTAYAYAAPA 63

Query: 84  -----APVYHAPVYSAPVVKSVAPVTYAAAPVLKYAAPYPYHAPVVKSIAHPVAYSPVAY 138
                APVY A  Y+AP V   A   YAA    KYA   P         A    Y     
Sbjct: 64  VYAAAAPVYAAHAYAAPAVHYAAAAHYAAPAYAKYAYAAPAVTAKAAYAAPAPVYKTAYA 123

Query: 139 HAPVSAGVAPYAVKAP----YSPAAVVSHVDFDGYGVHYAF 175
            A  +       V A     YSPAA VSH+ + G G HYA+
Sbjct: 124 AAAPAVYAHAAPVVATATVAYSPAAAVSHMSYAGLGAHYAW 164

Insect cuticles are composite structures whose mechanical properties are optimised for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species. Length = 164

>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 71   DSRVSNDAIAYAHAPVYHAPVYSAPVVKSVAPVTYAAAPVLK--YAAPYPYHAPVVKSIA 128
            DS +   +     APV  + V  APVV+    V   AAPVL    + P    AP      
Sbjct: 1113 DSNIVKLSPLATQAPVIKSVVTQAPVVQVTISVA-PAAPVLPAVVSPPVVSAAPAQSVAT 1171

Query: 129  ----HPVAYSPVAYHAPVSAGVAPYAVKA 153
                 PVA  P+A   PV   V      A
Sbjct: 1172 AVAMAPVAEVPIA--VPVQQSVDYMPSVA 1198

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PF11018	174	Cuticle_3: Pupal cuticle protein C1; InterPro: IPR	100.0
PF04527	66	Retinin_C: Drosophila Retinin like protein; InterP	96.05

>PF11018 Cuticle_3: Pupal cuticle protein C1; InterPro: IPR022727 Insect cuticles are composite structures whose mechanical properties are optimised for biological function

Probab=100.00  E-value=1.8e-34  Score=236.92  Aligned_cols=137  Identities=51%  Similarity=0.746  Sum_probs=95.2

Q ss_pred             ccCcccceecceeeecCCcceeeeecccccCCCcceeeecccccccccccccccc--------cccceecCCccc-ee-c
Q psy1603          32 AHSAVGSQSQSVVRSLDGNSVHSVYSKAVDTPFSSVRKYDSRVSNDAIAYAHAPV--------YHAPVYSAPVVK-SV-A  101 (175)
Q Consensus        32 a~pAv~at~~sivrs~~~~a~VstysKaI~Tp~Ssv~k~d~rVsn~a~~~a~a~v--------~k~~~yaaPv~~-tY-~  101 (175)
                      +.++|++|||||+|+++  ++||+|+|+|||||||+||+|+||+||++++++++.        .+...+++|+.. .| +
T Consensus         1 ~~~av~~t~~~~~r~~~--~~vS~yskav~tp~Ssv~k~d~risN~~~~~a~A~~~~~a~~~~a~~~a~aAPvv~~s~aA   78 (174)
T PF11018_consen    1 SAPAVGSTQENTVRSFG--GTVSHYSKAVDTPYSSVRKSDTRISNDAYTPAYAAPAYAAPAPYAKPYAAAAPVVAKSYAA   78 (174)
T ss_pred             CCccccccccceeeccC--cceeeeccCCCCCcceeEecccceecCccccccccccccccccccccccccCcceeeeccc
Confidence            46899999999999999  599999999999999999999999999999877531        122346677664 33 2


Q ss_pred             cc--cccc-ccccccc-------CC----CCccCCc---cccccCCC-CC-------CCc--ccccccccccCCcccccc
Q psy1603         102 PV--TYAA-APVLKYA-------AP----YPYHAPV---VKSIAHPV-AY-------SPV--AYHAPVSAGVAPYAVKAP  154 (175)
Q Consensus       102 ~~--~Ya~-ap~~~YA-------AP----~~y~ap~---~~~~ah~~-~~-------ap~--a~aAP~~a~~~~~~~~v~  154 (175)
                      |+  ++.. +|...|.       +|    ..|.+|.   ...++.++ ++       +|.  +++||++     ..+.|+
T Consensus        79 Pv~~~~~~AaPa~~~a~~~~~aaAP~~~~~a~aAPa~~~~~~yAa~apv~~~~~~~~a~~~Ya~aAPvv-----a~~~V~  153 (174)
T PF11018_consen   79 PVVAKYAYAAPAVVYAKAAYAAAAPAYAKTAYAAPAVYAQTTYAAPAPVYAQTYAAAAPAVYAHAAPVV-----AAATVS  153 (174)
T ss_pred             cccccccccCcccccccccccccCcceeeeeecccccccceeeccCCcccccccccccccccccccccc-----ccccee
Confidence            22  1111 3332221       34    2245554   12223222 21       122  4567764     278999


Q ss_pred             ccCCceeceeeccCCCccCCC
Q psy1603         155 YSPAAVVSHVDFDGYGVHYAF  175 (175)
Q Consensus       155 YspA~~vsh~s~~g~g~~yg~  175 (175)
                      |||+++||||||||||.||||
T Consensus       154 YSpA~~VsH~s~~g~g~~yg~  174 (174)
T PF11018_consen  154 YSPAPAVSHMSFDGFGAHYGW  174 (174)
T ss_pred             eccCCeeEEEeecCCcccccC
Confidence            999999999999999999999

The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.

>PF04527 Retinin_C: Drosophila Retinin like protein; InterPro: IPR007614 This entry consists of a number of Drosophila proteins which share a conserved C-terminal region related to that of the fly Retinin protein

Probab=96.05  E-value=0.0047  Score=44.43  Aligned_cols=47  Identities=32%  Similarity=0.352  Sum_probs=38.5

Q ss_pred             cceeeeecccccCCCc---ceeeeccc-ccccccccccccccccceecCCcccee
Q psy1603          50 NSVHSVYSKAVDTPFS---SVRKYDSR-VSNDAIAYAHAPVYHAPVYSAPVVKSV  100 (175)
Q Consensus        50 ~a~VstysKaI~Tp~S---sv~k~d~r-Vsn~a~~~a~a~v~k~~~yaaPv~~tY  100 (175)
                      ++.|+...|.++|+.|   +.+.+|+| |..|.+    +|++|++...+|+++++
T Consensus         7 va~VG~vv~~vPtAVSHQS~T~VH~~a~vv~pvv----aPvVkttvv~~Pv~~~~   57 (66)
T PF04527_consen    7 VAKVGAVVKSVPTAVSHQSSTQVHSKAPVVTPVV----APVVKTTVVAAPVVKTT   57 (66)
T ss_pred             ccccceEEEecCccccccceeEEEccCceeeeee----cceEEEEEecCCceeee
Confidence            5678889999999996   77788884 888888    67788887788988764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00