Psyllid ID: psy16062

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390------
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
cEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEc
cEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccccccccccccccHcHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccccHcccHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccccccccccccccccccEHEEEEEEEEEEEEEEc
mlmffgcmslvqgfsqtpipsmqpglmfGFVVSTVICIFghisgahlnpsvSVSAFLLEMITMVELVLYVCSQVLGCLIGVGlvniitpeeilfpvssaglsngfcttvphaSLTTVQAFLAEFFSTSLLVFTCcgvwdsrnakfgdsVAIKFALVIALCSitvgpytgasmnparslapaiysNVWTAHWIYWVAPILGSIVSTLLYKYVFskdhdgknrpeqlspadvetslgqikpprfGKRAVKLLELCLGEVLGTSMLMFFGCMslvqgfsqtpipsmqpglmfGFVVSTVICIFghisgahlnpsVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGlvniitpeeilfpvgsaglsngfcttvphaSLTTVQAFLAEFFSTsllvftcc
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDgknrpeqlspadvetslgqikpprfGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
**MFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFS***************************RFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTC*
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPE*LSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRRRRRRiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooRRRRRRRRRRRRRRRRRooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiRRRRRRRRRRRRRRRRRiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiii
SSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
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MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLLELCLGEVLGTSMLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMLELVLYVCSQVLGCLIGVGLVNIITPEEILFPVGSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query396 2.2.26 [Sep-21-2011]
Q5I4F9326 Aquaporin-4 OS=Notomys al N/A N/A 0.588 0.714 0.336 2e-34
P47863323 Aquaporin-4 OS=Rattus nor yes N/A 0.588 0.721 0.340 2e-34
P55088323 Aquaporin-4 OS=Mus muscul yes N/A 0.588 0.721 0.336 3e-34
P55087323 Aquaporin-4 OS=Homo sapie yes N/A 0.535 0.656 0.361 9e-34
Q923J4324 Aquaporin-4 OS=Dipodomys N/A N/A 0.535 0.654 0.361 1e-33
O77750323 Aquaporin-4 OS=Bos taurus yes N/A 0.535 0.656 0.357 2e-33
Q25074251 Aquaporin OS=Haematobia i N/A N/A 0.527 0.832 0.368 1e-28
Q9NHW7249 Aquaporin AQPAe.a OS=Aede N/A N/A 0.484 0.771 0.341 2e-28
P41181271 Aquaporin-2 OS=Homo sapie no N/A 0.510 0.745 0.344 1e-27
O62735271 Aquaporin-2 OS=Ovis aries N/A N/A 0.510 0.745 0.349 2e-27
>sp|Q5I4F9|AQP4_NOTAL Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1 Back     alignment and function desciption
 Score =  146 bits (369), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 127/244 (52%), Gaps = 11/244 (4%)

Query: 13  GFSQTPIP--SMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYV 70
           G S+ P+P   +   L FG  ++T++  FGHISG H+NP+V+V+      I++ + V Y+
Sbjct: 63  GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYI 122

Query: 71  CSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLL 130
            +Q LG +IG G++ ++TP  ++          G   T  H +LT     L E   T  L
Sbjct: 123 TAQCLGAIIGAGILYLVTPPNVV---------GGLGVTTVHGNLTAGHGLLVELIITFQL 173

Query: 131 VFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAH 190
           VFT     DS+      S+A+     +A+  +    YTGASMNPARS  PA+    W  H
Sbjct: 174 VFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENH 233

Query: 191 WIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLL 250
           WIYWV PI+G++++  LY+YVF  D + K R ++      + + G        +  V+  
Sbjct: 234 WIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSYTEVEDNRSQVETE 293

Query: 251 ELCL 254
           +L L
Sbjct: 294 DLIL 297
Forms a water-specific channel. Osmoreceptor which regulates body water balance and mediates water flow within the central nervous system.
Notomys alexis (taxid: 184396)
>sp|P47863|AQP4_RAT Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1 Back     alignment and function description
>sp|P55088|AQP4_MOUSE Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2 Back     alignment and function description
>sp|P55087|AQP4_HUMAN Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2 Back     alignment and function description
>sp|Q923J4|AQP4_DIPME Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1 Back     alignment and function description
>sp|O77750|AQP4_BOVIN Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3 Back     alignment and function description
>sp|Q25074|AQP_HAEIX Aquaporin OS=Haematobia irritans exigua PE=2 SV=1 Back     alignment and function description
>sp|Q9NHW7|AQP_AEDAE Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2 Back     alignment and function description
>sp|P41181|AQP2_HUMAN Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1 Back     alignment and function description
>sp|O62735|AQP2_SHEEP Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
170046689262 nodulin-26 [Culex quinquefasciatus] gi|1 0.535 0.809 0.488 1e-52
345485863275 PREDICTED: aquaporin AQPAn.G-like [Nason 0.580 0.836 0.440 5e-51
195455246270 GK23178 [Drosophila willistoni] gi|19417 0.570 0.837 0.426 3e-49
198458565266 GA24838 [Drosophila pseudoobscura pseudo 0.547 0.815 0.453 3e-49
195154645266 GL17598 [Drosophila persimilis] gi|19411 0.547 0.815 0.457 4e-49
195026129259 GH21221 [Drosophila grimshawi] gi|193902 0.560 0.857 0.449 7e-49
380020606272 PREDICTED: aquaporin AQPcic-like [Apis f 0.590 0.860 0.431 2e-48
194755124266 GF11832 [Drosophila ananassae] gi|190621 0.553 0.823 0.450 3e-48
307194454278 Aquaporin AQPcic [Harpegnathos saltator] 0.595 0.848 0.416 4e-48
328783763272 PREDICTED: aquaporin AQPcic-like isoform 0.590 0.860 0.427 8e-48
>gi|170046689|ref|XP_001850886.1| nodulin-26 [Culex quinquefasciatus] gi|167869382|gb|EDS32765.1| nodulin-26 [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 105/215 (48%), Positives = 146/215 (67%), Gaps = 3/215 (1%)

Query: 1   MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM 60
           MLMF GCM  V GF  TP  ++  G+ FGF V  VI  FG +SGAH+NPSVS++AF+ ++
Sbjct: 28  MLMFLGCMCCVAGFGNTPT-NVSGGIGFGFTVMMVIHTFGVVSGAHINPSVSIAAFIYDL 86

Query: 61  ITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAF 120
           +T   L+LY+ +Q  G + G GL+  ++P ++       G  NG C T PHA L+T +AF
Sbjct: 87  VTFPMLILYIIAQFAGAICGYGLLMAVSPYKVFTAALDEG--NGSCVTAPHADLSTWEAF 144

Query: 121 LAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAP 180
             EFF T++L++ CCG+WD RNAK  DS +IKFAL++A  SI  GPYTGASMN AR+ AP
Sbjct: 145 GVEFFITTILIWNCCGLWDPRNAKNTDSTSIKFALIVAGLSIAAGPYTGASMNTARTFAP 204

Query: 181 AIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215
           A+++  +   WIY+VAP L  ++  L+YKYVF ++
Sbjct: 205 AVWNGSYKGLWIYFVAPPLAGLIMPLIYKYVFRRE 239

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|345485863|ref|XP_001601253.2| PREDICTED: aquaporin AQPAn.G-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|195455246|ref|XP_002074630.1| GK23178 [Drosophila willistoni] gi|194170715|gb|EDW85616.1| GK23178 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|198458565|ref|XP_002138558.1| GA24838 [Drosophila pseudoobscura pseudoobscura] gi|198136388|gb|EDY69116.1| GA24838 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195154645|ref|XP_002018232.1| GL17598 [Drosophila persimilis] gi|194114028|gb|EDW36071.1| GL17598 [Drosophila persimilis] Back     alignment and taxonomy information
>gi|195026129|ref|XP_001986188.1| GH21221 [Drosophila grimshawi] gi|193902188|gb|EDW01055.1| GH21221 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|380020606|ref|XP_003694173.1| PREDICTED: aquaporin AQPcic-like [Apis florea] Back     alignment and taxonomy information
>gi|194755124|ref|XP_001959842.1| GF11832 [Drosophila ananassae] gi|190621140|gb|EDV36664.1| GF11832 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|307194454|gb|EFN76752.1| Aquaporin AQPcic [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|328783763|ref|XP_624194.2| PREDICTED: aquaporin AQPcic-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query396
FB|FBgn0034885261 CG4019 [Drosophila melanogaste 0.525 0.796 0.460 1.2e-47
FB|FBgn0034883265 CG17664 [Drosophila melanogast 0.532 0.796 0.427 2.1e-45
FB|FBgn0034884274 CG17662 [Drosophila melanogast 0.530 0.766 0.366 3.4e-38
MGI|MGI:107387323 Aqp4 "aquaporin 4" [Mus muscul 0.563 0.690 0.368 9.2e-36
RGD|2143323 Aqp4 "aquaporin 4" [Rattus nor 0.532 0.653 0.385 1.2e-35
UNIPROTKB|F1LQ18333 Aqp4 "Aquaporin-4" [Rattus nor 0.532 0.633 0.385 1.2e-35
UNIPROTKB|F1PEB5293 AQP4 "Uncharacterized protein" 0.532 0.720 0.385 3.1e-35
UNIPROTKB|P55087323 AQP4 "Aquaporin-4" [Homo sapie 0.532 0.653 0.363 8.3e-35
UNIPROTKB|O77750323 AQP4 "Aquaporin-4" [Bos taurus 0.532 0.653 0.372 1.1e-34
UNIPROTKB|F1NJZ6313 AQP4 "Uncharacterized protein" 0.542 0.686 0.340 1.2e-33
FB|FBgn0034885 CG4019 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 99/215 (46%), Positives = 136/215 (63%)

Query:     1 MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM 60
             +L+F GCM  V+     P   +Q  L FGF V   I  FG +SGAHLNP+V+V+A++ EM
Sbjct:    33 ILVFLGCMGCVKT-DLFPNNHLQIVLNFGFAVLIAIQCFGCVSGAHLNPAVTVAAYIYEM 91

Query:    61 ITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAF 120
             +T+     Y  +Q+LG  IG GL+ ++ P     P  + G   G C T+PH S+TT QA 
Sbjct:    92 VTLRMAFAYFAAQMLGAFIGYGLLMVLLPS----PTLTVGA--GLCVTLPHTSVTTGQAL 145

Query:   121 LAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAP 180
               EF  TS+LV  CCGVWD RN+KF DSV I+F L IA  +   GP+TG SMNPARS AP
Sbjct:   146 GIEFVITSILVIVCCGVWDPRNSKFHDSVGIRFGLAIACLACAAGPFTGGSMNPARSFAP 205

Query:   181 AIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD 215
             A+++  + ++WIYW+AP+  S ++   YK VF ++
Sbjct:   206 ALWNKHFESNWIYWLAPLSSSAITAYAYKVVFRRE 240
GO:0015250 "water channel activity" evidence=ISS
GO:0003014 "renal system process" evidence=IEP
GO:0015267 "channel activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=ISS
GO:0055085 "transmembrane transport" evidence=ISS
FB|FBgn0034883 CG17664 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0034884 CG17662 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:107387 Aqp4 "aquaporin 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|2143 Aqp4 "aquaporin 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ18 Aqp4 "Aquaporin-4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEB5 AQP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P55087 AQP4 "Aquaporin-4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|O77750 AQP4 "Aquaporin-4" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJZ6 AQP4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 9e-44
pfam00230218 pfam00230, MIP, Major intrinsic protein 9e-40
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 3e-39
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 5e-33
PRK05420231 PRK05420, PRK05420, aquaporin Z; Provisional 2e-28
PLN00026298 PLN00026, PLN00026, aquaporin NIP; Provisional 1e-23
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 3e-23
PLN00184296 PLN00184, PLN00184, aquaporin NIP1; Provisional 9e-23
PLN00182283 PLN00182, PLN00182, putative aquaporin NIP4; Provi 4e-21
PLN00027252 PLN00027, PLN00027, aquaporin TIP; Provisional 7e-20
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 3e-19
PLN00183274 PLN00183, PLN00183, putative aquaporin NIP7; Provi 8e-19
pfam00230218 pfam00230, MIP, Major intrinsic protein 6e-18
PLN00166250 PLN00166, PLN00166, aquaporin TIP2; Provisional 7e-18
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 2e-17
PTZ00016294 PTZ00016, PTZ00016, aquaglyceroporin; Provisional 3e-15
PLN00167256 PLN00167, PLN00167, aquaporin TIP5; Provisional 1e-12
PRK05420231 PRK05420, PRK05420, aquaporin Z; Provisional 3e-12
cd00333228 cd00333, MIP, Major intrinsic protein (MIP) superf 9e-12
PLN00184296 PLN00184, PLN00184, aquaporin NIP1; Provisional 4e-10
PLN00183274 PLN00183, PLN00183, putative aquaporin NIP7; Provi 5e-10
pfam00230218 pfam00230, MIP, Major intrinsic protein 2e-09
COG0580241 COG0580, GlpF, Glycerol uptake facilitator and rel 6e-07
PLN00182 283 PLN00182, PLN00182, putative aquaporin NIP4; Provi 6e-07
PLN00026298 PLN00026, PLN00026, aquaporin NIP; Provisional 1e-06
PLN00183274 PLN00183, PLN00183, putative aquaporin NIP7; Provi 3e-06
PTZ00016294 PTZ00016, PTZ00016, aquaglyceroporin; Provisional 4e-06
TIGR00861216 TIGR00861, MIP, MIP family channel proteins 5e-05
PLN00027252 PLN00027, PLN00027, aquaporin TIP; Provisional 3e-04
PLN00182283 PLN00182, PLN00182, putative aquaporin NIP4; Provi 0.001
PLN00166250 PLN00166, PLN00166, aquaporin TIP2; Provisional 0.001
PLN00027252 PLN00027, PLN00027, aquaporin TIP; Provisional 0.003
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information 
 Score =  151 bits (384), Expect = 9e-44
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 6/217 (2%)

Query: 1   MLMFFGCMSLVQ--GFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLL 58
           +L+FFGC S++            +   L +GF +  ++   GHISG H+NP+V+++  + 
Sbjct: 12  LLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVG 71

Query: 59  EMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQ 118
               ++ ++ Y+ +Q+LG ++G  L+  +     L  + +  +  G   T P   ++   
Sbjct: 72  GRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGN 131

Query: 119 AFLAEFFSTSLLVFTCCGVWD-SRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARS 177
           AF  EF  T +LV       D       G    +   L++A   +  GP TGASMNPARS
Sbjct: 132 AFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARS 191

Query: 178 LAPAIYSN---VWTAHWIYWVAPILGSIVSTLLYKYV 211
           L PA+++     W   W+YWV P++G+I   L+Y YV
Sbjct: 192 LGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228

Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms. Length = 228
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional Back     alignment and domain information
>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional Back     alignment and domain information
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional Back     alignment and domain information
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional Back     alignment and domain information
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional Back     alignment and domain information
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information
>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional Back     alignment and domain information
>gnl|CDD|215085 PLN00167, PLN00167, aquaporin TIP5; Provisional Back     alignment and domain information
>gnl|CDD|235453 PRK05420, PRK05420, aquaporin Z; Provisional Back     alignment and domain information
>gnl|CDD|238204 cd00333, MIP, Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>gnl|CDD|177778 PLN00184, PLN00184, aquaporin NIP1; Provisional Back     alignment and domain information
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional Back     alignment and domain information
>gnl|CDD|215807 pfam00230, MIP, Major intrinsic protein Back     alignment and domain information
>gnl|CDD|223653 COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional Back     alignment and domain information
>gnl|CDD|177663 PLN00026, PLN00026, aquaporin NIP; Provisional Back     alignment and domain information
>gnl|CDD|215092 PLN00183, PLN00183, putative aquaporin NIP7; Provisional Back     alignment and domain information
>gnl|CDD|240230 PTZ00016, PTZ00016, aquaglyceroporin; Provisional Back     alignment and domain information
>gnl|CDD|233156 TIGR00861, MIP, MIP family channel proteins Back     alignment and domain information
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional Back     alignment and domain information
>gnl|CDD|165748 PLN00182, PLN00182, putative aquaporin NIP4; Provisional Back     alignment and domain information
>gnl|CDD|165733 PLN00166, PLN00166, aquaporin TIP2; Provisional Back     alignment and domain information
>gnl|CDD|177664 PLN00027, PLN00027, aquaporin TIP; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 396
KOG0223|consensus238 100.0
KOG0224|consensus316 100.0
COG0580241 GlpF Glycerol uptake facilitator and related perme 100.0
PLN00184296 aquaporin NIP1; Provisional 100.0
PTZ00016294 aquaglyceroporin; Provisional 100.0
PRK05420231 aquaporin Z; Provisional 100.0
PLN00182283 putative aquaporin NIP4; Provisional 100.0
PLN00026298 aquaporin NIP; Provisional 100.0
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 100.0
PLN00166250 aquaporin TIP2; Provisional 100.0
PLN00027252 aquaporin TIP; Provisional 100.0
PLN00167256 aquaporin TIP5; Provisional 100.0
cd00333228 MIP Major intrinsic protein (MIP) superfamily. Mem 100.0
PLN00183274 putative aquaporin NIP7; Provisional 100.0
TIGR00861216 MIP MIP family channel proteins. processes. Some m 100.0
KOG0224|consensus 316 100.0
PLN00026298 aquaporin NIP; Provisional 100.0
PLN00183274 putative aquaporin NIP7; Provisional 99.98
PLN00182283 putative aquaporin NIP4; Provisional 99.97
cd00333228 MIP Major intrinsic protein (MIP) superfamily. Mem 99.97
PLN00184296 aquaporin NIP1; Provisional 99.97
COG0580241 GlpF Glycerol uptake facilitator and related perme 99.97
TIGR00861216 MIP MIP family channel proteins. processes. Some m 99.96
PLN00166250 aquaporin TIP2; Provisional 99.96
KOG0223|consensus238 99.95
PTZ00016294 aquaglyceroporin; Provisional 99.95
PLN00027252 aquaporin TIP; Provisional 99.95
PLN00167256 aquaporin TIP5; Provisional 99.95
PRK05420231 aquaporin Z; Provisional 99.95
PF00230227 MIP: Major intrinsic protein; InterPro: IPR000425 99.94
PF03773307 DUF318: Predicted permease; InterPro: IPR005524 Th 91.31
COG2116265 FocA Formate/nitrite family of transporters [Inorg 84.54
>KOG0223|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.7e-48  Score=357.03  Aligned_cols=204  Identities=36%  Similarity=0.682  Sum_probs=188.5

Q ss_pred             CEEEEeecceecccc-CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHH
Q psy16062          1 MLMFFGCMSLVQGFS-QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLI   79 (396)
Q Consensus         1 ~lv~~g~g~~~~~~~-~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~   79 (396)
                      +|+|+||+++..+.. ..+.+.+++++++|+++++.+|+++++||||+|||||+++++.|++++.+++.|+.+|++|+++
T Consensus        23 ~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~vaQ~lGa~~  102 (238)
T KOG0223|consen   23 LFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIVAQLLGAIA  102 (238)
T ss_pred             HHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHHHHHHHHHH
Confidence            367889999998772 3445899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHH-hccCCCCCCCCchhHHHHHHHH
Q psy16062         80 GVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCG-VWDSRNAKFGDSVAIKFALVIA  158 (396)
Q Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~-~~~~~~~~~~~~~~~~ig~~v~  158 (396)
                      |+++++.+.+.+..        ..+.+.+.+.++.+.+|+++.|++.||.|+++++. .+|+|+.   .+.|+.||+++.
T Consensus       103 g~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---~~a~l~IG~~v~  171 (238)
T KOG0223|consen  103 GAALLKVVTPGQYN--------RKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---ELAPLAIGFSVG  171 (238)
T ss_pred             HHHHHheecCcccc--------cCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---ccHHHHHHHHHH
Confidence            99999999997522        23557777888899999999999999999999999 7788876   699999999999


Q ss_pred             HHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcC
Q psy16062        159 LCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKD  215 (396)
Q Consensus       159 ~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~  215 (396)
                      ..++..+++||++|||||+|||+++.++|++|||||+||++|+++++++|++++.++
T Consensus       172 ~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~  228 (238)
T KOG0223|consen  172 LNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD  228 (238)
T ss_pred             HHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence            999999999999999999999999999999999999999999999999999998887

>KOG0224|consensus Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>KOG0224|consensus Back     alignment and domain information
>PLN00026 aquaporin NIP; Provisional Back     alignment and domain information
>PLN00183 putative aquaporin NIP7; Provisional Back     alignment and domain information
>PLN00182 putative aquaporin NIP4; Provisional Back     alignment and domain information
>cd00333 MIP Major intrinsic protein (MIP) superfamily Back     alignment and domain information
>PLN00184 aquaporin NIP1; Provisional Back     alignment and domain information
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00861 MIP MIP family channel proteins Back     alignment and domain information
>PLN00166 aquaporin TIP2; Provisional Back     alignment and domain information
>KOG0223|consensus Back     alignment and domain information
>PTZ00016 aquaglyceroporin; Provisional Back     alignment and domain information
>PLN00027 aquaporin TIP; Provisional Back     alignment and domain information
>PLN00167 aquaporin TIP5; Provisional Back     alignment and domain information
>PRK05420 aquaporin Z; Provisional Back     alignment and domain information
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ] Back     alignment and domain information
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins Back     alignment and domain information
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
2d57_A301 Double Layered 2d Crystal Structure Of Aquaporin-4 1e-35
2d57_A 301 Double Layered 2d Crystal Structure Of Aquaporin-4 1e-12
3iyz_A340 Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res 3e-35
3iyz_A 340 Structure Of Aquaporin-4 S180d Mutant At 10.0 A Res 1e-12
2zz9_A301 Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso 3e-35
2zz9_A 301 Structure Of Aquaporin-4 S180d Mutant At 2.8 A Reso 1e-12
3gd8_A223 Crystal Structure Of Human Aquaporin 4 At 1.8 And I 1e-32
3gd8_A223 Crystal Structure Of Human Aquaporin 4 At 1.8 And I 3e-12
2b6o_A263 Electron Crystallographic Structure Of Lens Aquapor 3e-26
2b6o_A 263 Electron Crystallographic Structure Of Lens Aquapor 7e-10
1sor_A235 Aquaporin-0 Membrane Junctions Reveal The Structure 4e-26
1sor_A235 Aquaporin-0 Membrane Junctions Reveal The Structure 7e-10
3m9i_A220 Electron Crystallographic Structure Of Lens Aquapor 5e-26
3m9i_A220 Electron Crystallographic Structure Of Lens Aquapor 3e-09
1ymg_A263 The Channel Architecture Of Aquaporin O At 2.2 Angs 5e-26
1ymg_A 263 The Channel Architecture Of Aquaporin O At 2.2 Angs 1e-08
1fqy_A269 Structure Of Aquaporin-1 At 3.8 A Resolution By Ele 6e-22
1fqy_A 269 Structure Of Aquaporin-1 At 3.8 A Resolution By Ele 5e-07
1j4n_A271 Crystal Structure Of The Aqp1 Water Channel Length 7e-21
1j4n_A 271 Crystal Structure Of The Aqp1 Water Channel Length 2e-06
3d9s_A266 Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St 3e-20
3d9s_A 266 Human Aquaporin 5 (Aqp5) - High Resolution X-Ray St 2e-08
2evu_A246 Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut 1e-17
2evu_A246 Crystal Structure Of Aquaporin Aqpm At 2.3a Resolut 6e-09
3cn6_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 1e-15
3cn6_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 5e-05
2b5f_A303 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-15
2b5f_A 303 Crystal Structure Of The Spinach Aquaporin Sopip2;1 4e-05
3cn5_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-15
3cn5_A304 Crystal Structure Of The Spinach Aquaporin Sopip2;1 8e-05
1z98_A281 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-15
1z98_A281 Crystal Structure Of The Spinach Aquaporin Sopip2;1 4e-05
3cll_A300 Crystal Structure Of The Spinach Aquaporin Sopip2;1 2e-15
3cll_A300 Crystal Structure Of The Spinach Aquaporin Sopip2;1 8e-05
3ne2_A246 Archaeoglobus Fulgidus Aquaporin Length = 246 3e-15
3ne2_A246 Archaeoglobus Fulgidus Aquaporin Length = 246 3e-05
3nka_A234 Crystal Structure Of Aqpz H174g,T183f Length = 234 4e-15
3nka_A234 Crystal Structure Of Aqpz H174g,T183f Length = 234 1e-09
1rc2_B231 2.5 Angstrom Resolution X-Ray Structure Of Aquapori 4e-15
1rc2_B231 2.5 Angstrom Resolution X-Ray Structure Of Aquapori 1e-09
1ldf_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 4e-15
1ldf_A 281 Crystal Structure Of The E. Coli Glycerol Facilitat 9e-08
3nkc_A234 Crystal Structure Of Aqpz F43w,H174g,T183f Length = 1e-14
3nkc_A234 Crystal Structure Of Aqpz F43w,H174g,T183f Length = 3e-09
3nk5_A234 Crystal Structure Of Aqpz Mutant F43w Length = 234 3e-14
3nk5_A234 Crystal Structure Of Aqpz Mutant F43w Length = 234 6e-09
1fx8_A281 Crystal Structure Of The E. Coli Glycerol Facilitat 3e-14
1fx8_A 281 Crystal Structure Of The E. Coli Glycerol Facilitat 2e-07
2o9d_A234 Crystal Structure Of Aqpz Mutant T183c. Length = 23 4e-14
2o9d_A234 Crystal Structure Of Aqpz Mutant T183c. Length = 23 8e-09
2o9e_A234 Crystal Structure Of Aqpz Mutant T183c Complexed Wi 5e-14
2o9e_A234 Crystal Structure Of Aqpz Mutant T183c Complexed Wi 9e-09
2o9f_A234 Crystal Structure Of Aqpz Mutant L170c Length = 234 1e-13
2o9f_A234 Crystal Structure Of Aqpz Mutant L170c Length = 234 8e-09
3llq_A256 Aquaporin Structure From Plant Pathogen Agrobacteri 9e-12
2w1p_A279 1.4 Angstrom Crystal Structure Of P.Pastoris Aquapo 3e-11
3c02_A258 X-Ray Structure Of The Aquaglyceroporin From Plasmo 8e-04
>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure 
Iteration: 1

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 11/244 (4%)
Query: 13  GFSQTPIP--SMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYV 70
           G S+ P+P   +   L FG  ++T++  FGHISG H+NP+V+V+      I++ + V Y+
Sbjct: 38  GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYI 97
Query: 71  CSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLL 130
            +Q LG +IG G++ ++TP  ++          G   T  H +LT     L E   T  L
Sbjct: 98  TAQCLGAIIGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQL 148
Query: 131 VFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAPAIYSNVWTAH 190
           VFT     DS+      SVA+     +A+  +    YTGASMNPARS  PA+    W  H
Sbjct: 149 VFTIFASCDSKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENH 208
Query: 191 WIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQIKPPRFGKRAVKLL 250
           WIYWV PI+G++++  LY+YVF  D + K R ++      + + G        +  V+  
Sbjct: 209 WIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSYMEVEDNRSQVETE 268
Query: 251 ELCL 254
           +L L
Sbjct: 269 DLIL 272
>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4 (Aqp4m23) At 3.2 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340 Back     alignment and structure
>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution From Electron Micrograph Length = 340 Back     alignment and structure
>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution By Electron Crystallography Length = 301 Back     alignment and structure
>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223 Back     alignment and structure
>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its Mechanism Of Conductance Length = 223 Back     alignment and structure
>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263 Back     alignment and structure
>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore State Length = 263 Back     alignment and structure
>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235 Back     alignment and structure
>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A Closed Water Pore Length = 235 Back     alignment and structure
>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220 Back     alignment and structure
>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0 (Aqp Mip) In E. Coli Polar Lipids Length = 220 Back     alignment and structure
>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263 Back     alignment and structure
>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom Resolution Length = 263 Back     alignment and structure
>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269 Back     alignment and structure
>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography Length = 269 Back     alignment and structure
>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271 Back     alignment and structure
>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel Length = 271 Back     alignment and structure
>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266 Back     alignment and structure
>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure Length = 266 Back     alignment and structure
>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246 Back     alignment and structure
>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution Length = 246 Back     alignment and structure
>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304 Back     alignment and structure
>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e Mutant Length = 304 Back     alignment and structure
>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303 Back     alignment and structure
>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An Open Conformation To 3.9 Resolution Length = 303 Back     alignment and structure
>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304 Back     alignment and structure
>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e, S274e Mutant Length = 304 Back     alignment and structure
>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281 Back     alignment and structure
>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A Closed Conformation Length = 281 Back     alignment and structure
>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300 Back     alignment and structure
>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e Mutant Length = 300 Back     alignment and structure
>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin Length = 246 Back     alignment and structure
>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin Length = 246 Back     alignment and structure
>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f Length = 234 Back     alignment and structure
>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f Length = 234 Back     alignment and structure
>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z Length = 231 Back     alignment and structure
>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z Length = 231 Back     alignment and structure
>pdb|1LDF|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48f, F200t Length = 281 Back     alignment and structure
>pdb|1LDF|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48f, F200t Length = 281 Back     alignment and structure
>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f Length = 234 Back     alignment and structure
>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f Length = 234 Back     alignment and structure
>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w Length = 234 Back     alignment and structure
>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w Length = 234 Back     alignment and structure
>pdb|1FX8|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol Length = 281 Back     alignment and structure
>pdb|1FX8|A Chain A, Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol Length = 281 Back     alignment and structure
>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c. Length = 234 Back     alignment and structure
>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c. Length = 234 Back     alignment and structure
>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With Mercury Length = 234 Back     alignment and structure
>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With Mercury Length = 234 Back     alignment and structure
>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c Length = 234 Back     alignment and structure
>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c Length = 234 Back     alignment and structure
>pdb|3LLQ|A Chain A, Aquaporin Structure From Plant Pathogen Agrobacterium Tumerfaciens Length = 256 Back     alignment and structure
>pdb|2W1P|A Chain A, 1.4 Angstrom Crystal Structure Of P.Pastoris Aquaporin, Aqy1, In A Closed Conformation At Ph 8.0 Length = 279 Back     alignment and structure
>pdb|3C02|A Chain A, X-Ray Structure Of The Aquaglyceroporin From Plasmodium Falciparum Length = 258 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query396
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 1e-69
3iyz_A 340 Aquaporin-4; water transport, water channel, two-d 7e-32
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 4e-14
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 2e-68
2zz9_A 301 Aquaporin-4; water transport, water channel, two-d 3e-31
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 1e-13
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 3e-66
2b6o_A 263 Aquaporin-0, lens fiber major intrinsic protein; a 3e-31
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 6e-13
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 1e-64
1j4n_A 271 Aquaporin 1; membrane protein, channel protein, tr 5e-29
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 2e-12
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 3e-64
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 3e-30
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 2e-12
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 3e-64
3d9s_A 266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 2e-31
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 3e-13
2o9g_A234 Aquaporin Z; integral membrane protein, structural 1e-58
2o9g_A234 Aquaporin Z; integral membrane protein, structural 5e-30
2o9g_A234 Aquaporin Z; integral membrane protein, structural 3e-11
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 4e-58
3cn5_A 304 Aquaporin; membrane protein, transmembrane, transp 6e-29
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 6e-12
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 1e-55
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 4e-28
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 1e-12
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 4e-52
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 2e-25
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 6e-11
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 2e-43
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 6e-21
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 2e-11
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 4e-41
3c02_A 258 Aquaglyceroporin; membrane protein, glycerol, wate 4e-21
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 6e-14
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 2e-40
1ldf_A 281 Glycerol uptake facilitator protein; glycerol-cond 4e-22
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340 Back     alignment and structure
 Score =  221 bits (565), Expect = 1e-69
 Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 12/257 (4%)

Query: 1   MLMFFGCMSLV---QGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFL 57
           + +     S +      +  P+  +   L FG  ++T++  FGHISG H+NP+V+V+   
Sbjct: 64  IFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVC 123

Query: 58  LEMITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTV 117
              I++ + V Y+ +Q LG +IG G++ ++TP  +           G   T  H +LT  
Sbjct: 124 TRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV---------VGGLGVTTVHGNLTAG 174

Query: 118 QAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARS 177
              L E   T  LVFT     D +      SVA+     +A+  +    YTGASMNPARS
Sbjct: 175 HGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARS 234

Query: 178 LAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHDGKNRPEQLSPADVETSLGQI 237
             PA+    W  HWIYWV PI+G++++  LY+YVF  D + K R ++      + + G  
Sbjct: 235 FGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSY 294

Query: 238 KPPRFGKRAVKLLELCL 254
                 +  V+  +L L
Sbjct: 295 MEVEDNRSQVETEDLIL 311
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340 Back     alignment and structure
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Length = 340 Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301 Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301 Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Length = 301 Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263 Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263 Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Length = 263 Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271 Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271 Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Length = 271 Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223 Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223 Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Length = 223 Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266 Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266 Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Length = 266 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Length = 234 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Length = 304 Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256 Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256 Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Length = 256 Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279 Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279 Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Length = 279 Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246 Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246 Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Length = 246 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Length = 258 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Length = 281 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
3iyz_A340 Aquaporin-4; water transport, water channel, two-d 100.0
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 100.0
3d9s_A266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 100.0
2zz9_A301 Aquaporin-4; water transport, water channel, two-d 100.0
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 100.0
1ldf_A281 Glycerol uptake facilitator protein; glycerol-cond 100.0
1j4n_A271 Aquaporin 1; membrane protein, channel protein, tr 100.0
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 100.0
2o9g_A234 Aquaporin Z; integral membrane protein, structural 100.0
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 100.0
3cn5_A304 Aquaporin; membrane protein, transmembrane, transp 100.0
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 100.0
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 100.0
3llq_A256 Aquaporin Z 2; aquaporin tetramer, membrane protei 99.97
2w2e_A279 AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating 99.97
3cn5_A 304 Aquaporin; membrane protein, transmembrane, transp 99.97
3gd8_A223 Aquaporin-4; proton exclusion, structural genomics 99.97
3iyz_A 340 Aquaporin-4; water transport, water channel, two-d 99.97
2zz9_A 301 Aquaporin-4; water transport, water channel, two-d 99.96
2f2b_A246 Aquaporin AQPM; protein, integral membrane protein 99.96
2b6o_A263 Aquaporin-0, lens fiber major intrinsic protein; a 99.96
1ldf_A 281 Glycerol uptake facilitator protein; glycerol-cond 99.96
3d9s_A 266 Aquaporin-5, AQP-5; aquaglyceroporin, membrane pro 99.96
1j4n_A 271 Aquaporin 1; membrane protein, channel protein, tr 99.96
2o9g_A234 Aquaporin Z; integral membrane protein, structural 99.95
3c02_A258 Aquaglyceroporin; membrane protein, glycerol, wate 99.94
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
Probab=100.00  E-value=4e-49  Score=378.16  Aligned_cols=208  Identities=36%  Similarity=0.680  Sum_probs=185.8

Q ss_pred             CEEEEeecceecccc---CCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhH
Q psy16062          1 MLMFFGCMSLVQGFS---QTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGC   77 (396)
Q Consensus         1 ~lv~~g~g~~~~~~~---~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa   77 (396)
                      +|+|+|||++++...   ..+.+++.++++||+++++++|+++++||||+|||||+++++.|+++|++++.||++|++||
T Consensus        64 lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA  143 (340)
T 3iyz_A           64 IFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGA  143 (340)
T ss_pred             HHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            467889999886432   12348899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHH
Q psy16062         78 LIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVI  157 (396)
Q Consensus        78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v  157 (396)
                      ++|++++|.++++...         ...+.+.+.++.+..++|+.|+++||+|+++++.+.|+++....+..|+.||+++
T Consensus       144 ~~GA~lv~~~~~~~~~---------~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v  214 (340)
T 3iyz_A          144 IIGAGILYLVTPPSVV---------GGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV  214 (340)
T ss_pred             HHHHHHHHHhcchhhc---------CceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHH
Confidence            9999999999886542         2345566667789999999999999999999999998877655568899999999


Q ss_pred             HHHHHhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCCC
Q psy16062        158 ALCSITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDHD  217 (396)
Q Consensus       158 ~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~~  217 (396)
                      .+.+..++++||++||||||||||++.++|+++||||+||++|+++|+++|++++.|+++
T Consensus       215 ~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p~~~  274 (340)
T 3iyz_A          215 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVE  274 (340)
T ss_pred             HHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence            888888889999999999999999999999999999999999999999999999987754
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str} Back     alignment and structure
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A* Back     alignment and structure
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A Back     alignment and structure
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens} Back     alignment and structure
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus} Back     alignment and structure
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A Back     alignment and structure
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A* Back     alignment and structure
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A* Back     alignment and structure
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A* Back     alignment and structure
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens} Back     alignment and structure
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A Back     alignment and structure
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A* Back     alignment and structure
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 396
d1ymga1234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 6e-35
d1ymga1234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 3e-15
d1ymga1234 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [ 2e-07
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 2e-34
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 2e-14
d1j4na_249 f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId 4e-10
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 4e-33
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 3e-16
d1rc2a_231 f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId 6e-09
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 2e-31
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 1e-15
d1fx8a_254 f.19.1.1 (A:) Glycerol uptake facilitator protein 2e-11
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  126 bits (318), Expect = 6e-35
 Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 10/212 (4%)

Query: 1   MLMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEM 60
             +FFG  + ++  +  P+  +Q  L FG  ++T++   GHISGAH+NP+V+ +  +   
Sbjct: 17  FYVFFGLGASLRW-APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ 75

Query: 61  ITMVELVLYVCSQVLGCLIGVGLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAF 120
           ++++  + Y+ +Q+LG + G  ++  +TP  +   ++   L  G             QA 
Sbjct: 76  MSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVG---------QAT 126

Query: 121 LAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCSITVGPYTGASMNPARSLAP 180
           + E F T   V      +D R      SVA+     + L  +    YTGA MNPARS AP
Sbjct: 127 IVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAP 186

Query: 181 AIYSNVWTAHWIYWVAPILGSIVSTLLYKYVF 212
           AI +  +T HW+YWV P++G+ + +LLY ++ 
Sbjct: 187 AILTRNFTNHWVYWVGPVIGAGLGSLLYDFLL 218
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Length = 234 Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Length = 249 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Length = 231 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Length = 254 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query396
d1ymga1234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1fx8a_254 Glycerol uptake facilitator protein GlpF {Escheric 100.0
d1rc2a_231 Aquaporin Z {Escherichia coli [TaxId: 562]} 100.0
d1j4na_249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 100.0
d1ymga1234 Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} 99.95
d1j4na_249 Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} 99.94
d1rc2a_231 Aquaporin Z {Escherichia coli [TaxId: 562]} 99.93
d1fx8a_254 Glycerol uptake facilitator protein GlpF {Escheric 99.93
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Aquaporin-like
superfamily: Aquaporin-like
family: Aquaporin-like
domain: Aquaporin-0
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-46  Score=346.03  Aligned_cols=205  Identities=31%  Similarity=0.559  Sum_probs=182.7

Q ss_pred             EEEEeecceeccccCCCCCchHHHHHHHHHHHHHHHHHhccCccccChHHHHHHHHhcCCChhHHHHHHHHHhhhHHHHH
Q psy16062          2 LMFFGCMSLVQGFSQTPIPSMQPGLMFGFVVSTVICIFGHISGAHLNPSVSVSAFLLEMITMVELVLYVCSQVLGCLIGV   81 (396)
Q Consensus         2 lv~~g~g~~~~~~~~~~~~~~~~a~~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~   81 (396)
                      |+|+|||+++.....+ .+.+.++++||+++++++++++++||||+|||||+++++.|++++++++.|+++|++||++|+
T Consensus        18 lvf~g~gs~~~~~~~~-~~~~~ial~~G~~v~~~i~~~g~iSGaH~NPAVTla~~~~g~i~~~~~~~Yi~aQ~lGa~~ga   96 (234)
T d1ymga1          18 YVFFGLGASLRWAPGP-LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGA   96 (234)
T ss_dssp             HHHHHHHHHCSCC-CH-HHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCC-cchHHHHHHHHHHHHHHHHHHhccccCccCchhhHHHHhccCCChhheeeeeehHHHHHHHHH
Confidence            5678898877655433 377889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccccccccCCCCCccceEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCchhHHHHHHHHHHH
Q psy16062         82 GLVNIITPEEILFPVSSAGLSNGFCTTVPHASLTTVQAFLAEFFSTSLLVFTCCGVWDSRNAKFGDSVAIKFALVIALCS  161 (396)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~lv~~il~~~~~~~~~~~~~~~~~ig~~v~~~~  161 (396)
                      ++++.+++++..+         ......+.++.+..++++.|++.|++++++++...|++++...+..|+.+|+.+....
T Consensus        97 ~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~E~~~t~~lv~~i~~~~~~~~~~~~~~~~l~ig~~v~~~~  167 (234)
T d1ymga1          97 AVLYSVTPPAVRG---------NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGH  167 (234)
T ss_dssp             HHHHHHSCTTTCT---------TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCSCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCccccc---------cccccccCccchhhHHHHHHHHHHHHHHHhheeeecCCccCcCcceeEeehHHHHHHH
Confidence            9999999876542         1112234456889999999999999999999999998887766688999999999999


Q ss_pred             HhccCCccCccchhhhhHHHHhhccccccchhhhhhHHHHHHHHHHHHHHhhcCC
Q psy16062        162 ITVGPYTGASMNPARSLAPAIYSNVWTAHWIYWVAPILGSIVSTLLYKYVFSKDH  216 (396)
Q Consensus       162 ~~~~~~tG~~lNPAr~lg~~~~~~~~~~~wvy~v~p~~Ga~la~~l~~~~~~~~~  216 (396)
                      ...+++||+++||||||||++++++|+++|+||++|++|+++++++|++++.|+.
T Consensus       168 ~~~~~~tG~~~NPAR~~gp~v~~~~~~~~wiy~vgP~~Ga~laa~ly~~~~~~~~  222 (234)
T d1ymga1         168 LFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPRL  222 (234)
T ss_dssp             HHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCC
T ss_pred             HHhcccccccccchhhhhHHHhccCccCeeeeehHHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999999999987664
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ymga1 f.19.1.1 (A:6-239) Aquaporin-0 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1j4na_ f.19.1.1 (A:) Aquaporin-1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1rc2a_ f.19.1.1 (A:) Aquaporin Z {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fx8a_ f.19.1.1 (A:) Glycerol uptake facilitator protein GlpF {Escherichia coli [TaxId: 562]} Back     information, alignment and structure