Psyllid ID: psy16169

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MNVVPKGICLRLCSSSSSASTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRSRSMSLIRWPIKDTIVPI
Secondary Structure (PSIPRED)
ccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccEEccc
Coil and Loop (DISEMBL)
MNVVPKGICLRlcsssssastkydvdLLKSDVALARDRVSRLKRELEQIRTEMnytqrglvpmgTRLAEMARMRLEYDETRKRIQIIQTQLADleekvtpgqaesdkdRLILFQEKEQLLRSRSMSlirwpikdtivpi
Flexible Loop (DISEMBL)
MNVVPKGICLRLcsssssastkydvdllksdvalardRVSRLKREleqirtemnytqrglvpmgtRLAEMARMRLEYDETRKRIQIIQTqladleekvtpgqaesdkdrlILFQEKeqllrsrsmslirwpikdtivpi
Low Complexity Region (SEG)
MNVVPKGICLRLCsssssasTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRSRSMSLIRWPIKDTIVPI
Disordered region (IsUnstruct)
******GICLRLC*********YDVDLLKSDVALARDRV******LEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLA*****************LILFQ****LL***SMSLIRWPIKDT****
Disordered Region (DISOPRED)
*****KGICLRLCSS*******************************************************************RIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL*****************VPI
Disordered Region (DISEMBL)
MNVVPKGICLRLCSSSSSASTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLE**********DKDRLILFQEKEQLLRSRSMSLIRWPIKDTIVPI
Disordered Region (DISPRO)
*NVVPKGICLRLCSSSSSASTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRSRSMSLIRWPIKDTIVPI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNVVPKGICLRLCSSSSSASTKYDxxxxxxxxxxxxxxxxxxxxxxxxxxxxMNYTQRGLVPMGTRLAExxxxxxxxxxxxxxxxxxxxxxxxxxxxVTPGQAESDKDRLILFQEKEQLLRSRSMSLIRWPIKDTIVPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
B4NAD3	1288	Protein kibra OS=Drosophi	N/A	N/A	0.532	0.057	0.52	5e-13
B3LWS4	1271	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.050	0.569	6e-13
B4K6I9	1264	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.050	0.569	6e-13
B4PSQ2	1288	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.049	0.569	6e-13
B3P3M8	1283	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.049	0.569	6e-13
B4M5X4	1276	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.050	0.569	6e-13
B4HEJ6	1295	Protein kibra OS=Drosophi	N/A	N/A	0.460	0.049	0.569	1e-12
Q9VFG8	1288	Protein kibra OS=Drosophi	yes	N/A	0.460	0.049	0.553	2e-12
Q8IX03	1113	Protein KIBRA OS=Homo sap	yes	N/A	0.482	0.060	0.441	4e-08
Q5SXA9	1104	Protein KIBRA OS=Mus musc	yes	N/A	0.482	0.060	0.441	4e-08

>sp|B4NAD3|KIBRA_DROWI Protein kibra OS=Drosophila willistoni GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 329 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 388

Query: 123 RSMSLIRWPIKDTIV 137
            S+SL    +++T V
Sbjct: 389 NSISLKSRSLEETQV 403

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.
Drosophila willistoni (taxid: 7260)

>sp|B3LWS4|KIBRA_DROAN Protein kibra OS=Drosophila ananassae GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 322 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 381

Query: 123 RSMSL 127
            S+SL
Sbjct: 382 NSISL 386

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila ananassae (taxid: 7217)

>sp|B4K6I9|KIBRA_DROMO Protein kibra OS=Drosophila mojavensis GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 315 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 374

Query: 123 RSMSL 127
            S+SL
Sbjct: 375 NSISL 379

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila mojavensis (taxid: 7230)

>sp|B4PSQ2|KIBRA_DROYA Protein kibra OS=Drosophila yakuba GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 331 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 390

Query: 123 RSMSL 127
            S+SL
Sbjct: 391 NSISL 395

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila yakuba (taxid: 7245)

>sp|B3P3M8|KIBRA_DROER Protein kibra OS=Drosophila erecta GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 330 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 389

Query: 123 RSMSL 127
            S+SL
Sbjct: 390 NSISL 394

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila erecta (taxid: 7220)

>sp|B4M5X4|KIBRA_DROVI Protein kibra OS=Drosophila virilis GN=Kibra PE=3 SV=1

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 323 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 382

Query: 123 RSMSL 127
            S+SL
Sbjct: 383 NSISL 387

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila virilis (taxid: 7244)

>sp|B4HEJ6|KIBRA_DROSE Protein kibra OS=Drosophila sechellia GN=Kibra PE=3 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+  L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 330 GARFAEMAKTTLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 389

Query: 123 RSMSL 127
            S+SL
Sbjct: 390 NSISL 394

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila sechellia (taxid: 7238)

>sp|Q9VFG8|KIBRA_DROME Protein kibra OS=Drosophila melanogaster GN=kibra PE=1 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
           G R AEMA+ + +Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct: 331 GARFAEMAKTKWQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 390

Query: 123 RSMSL 127
            S+SL
Sbjct: 391 NSISL 395

Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.

Drosophila melanogaster (taxid: 7227)

>sp|Q8IX03|KIBRA_HUMAN Protein KIBRA OS=Homo sapiens GN=WWC1 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             +LAE  R+RL Y+E ++RI  ++ QLA L+ +  PG  +S++DRLIL  EKE+LL+  
Sbjct: 295 NNQLAEKVRLRLRYEEAKRRIANLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEM 354

Query: 123 RSMSLIRW 130
           R +S  +W
Sbjct: 355 RFISPRKW 362

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with NF2 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. Acts as a transcriptional coactivator of ESR1 which plays an essential role in DYNLL1-mediated ESR1 transactivation. Regulates collagen-stimulated activation of the ERK/MAPK cascade. Modulates directional migration of podocytes. Acts as a substrate for PRKCZ and may be associated with memory performance.

Homo sapiens (taxid: 9606)

>sp|Q5SXA9|KIBRA_MOUSE Protein KIBRA OS=Mus musculus GN=Wwc1 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 64  GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             +LAE  R+RL Y+E ++RI  ++ QLA L+ +  PG  +S++DRLIL  EKE+LL+  
Sbjct: 295 NNQLAEKVRLRLRYEEAKRRIANLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEM 354

Query: 123 RSMSLIRW 130
           R +S  +W
Sbjct: 355 RFISPRKW 362

Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with NF2 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. Acts as a transcriptional coactivator of ESR1 which plays an essential role in DYNLL1-mediated ESR1 transactivation. Regulates collagen-stimulated activation of the ERK/MAPK cascade. Modulates directional migration of podocytes. Acts as a substrate for PRKCZ and may be associated with memory performance (By similarity). Regulates collagen-stimulated activation of the ERK/MAPK cascade.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
242019008	1256	myosin-2 heavy chain, non muscle, putati	0.482	0.053	0.808	4e-23
350420833	1342	PREDICTED: protein kibra-like [Bombus im	0.424	0.043	0.870	4e-23
340724078	1342	PREDICTED: protein kibra-like [Bombus te	0.424	0.043	0.870	4e-23
383863282	1278	PREDICTED: protein kibra-like isoform 2	0.424	0.046	0.870	5e-23
383863280	1284	PREDICTED: protein kibra-like isoform 1	0.424	0.045	0.870	5e-23
328781578	1270	PREDICTED: protein kibra-like isoform 1	0.424	0.046	0.870	5e-23
328698384	1002	PREDICTED: protein kibra-like isoform 2	0.388	0.053	0.887	5e-23
380011086	1278	PREDICTED: protein kibra-like [Apis flor	0.424	0.046	0.870	6e-23
110755844	1278	PREDICTED: protein kibra-like isoform 2	0.424	0.046	0.870	6e-23
328698382	1061	PREDICTED: protein kibra-like isoform 1	0.388	0.050	0.887	6e-23

>gi|242019008|ref|XP_002429959.1| myosin-2 heavy chain, non muscle, putative [Pediculus humanus corporis] gi|212515010|gb|EEB17221.1| myosin-2 heavy chain, non muscle, putative [Pediculus humanus corporis]

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/68 (80%), Positives = 63/68 (92%), Gaps = 1/68 (1%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMAR RL+YDE RKR+Q++Q +LADLEEKVTPGQAESDKDRL+LFQEKEQL
Sbjct: 285 LVPIGTRLAEMARTRLQYDEARKRVQLVQRKLADLEEKVTPGQAESDKDRLLLFQEKEQL 344

Query: 120 LRS-RSMS 126
           LR  RSM+
Sbjct: 345 LRELRSMT 352

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420833|ref|XP_003492641.1| PREDICTED: protein kibra-like [Bombus impatiens]

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 288 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 347

Query: 120 LR 121
           LR
Sbjct: 348 LR 349

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724078|ref|XP_003400412.1| PREDICTED: protein kibra-like [Bombus terrestris]

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 288 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 347

Query: 120 LR 121
           LR
Sbjct: 348 LR 349

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863282|ref|XP_003707110.1| PREDICTED: protein kibra-like isoform 2 [Megachile rotundata]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 282 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 341

Query: 120 LR 121
           LR
Sbjct: 342 LR 343

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863280|ref|XP_003707109.1| PREDICTED: protein kibra-like isoform 1 [Megachile rotundata]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 288 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 347

Query: 120 LR 121
           LR
Sbjct: 348 LR 349

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781578|ref|XP_003249999.1| PREDICTED: protein kibra-like isoform 1 [Apis mellifera]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 280 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 339

Query: 120 LR 121
           LR
Sbjct: 340 LR 341

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698384|ref|XP_003240627.1| PREDICTED: protein kibra-like isoform 2 [Acyrthosiphon pisum]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/62 (88%), Positives = 57/62 (91%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           L+PMGTRLAEMARMRLEYDE RKRIQ IQ QLADLEEKV PGQ ESDKDRL+LFQEKEQL
Sbjct: 234 LMPMGTRLAEMARMRLEYDEARKRIQNIQQQLADLEEKVMPGQEESDKDRLLLFQEKEQL 293

Query: 120 LR 121
           LR
Sbjct: 294 LR 295

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011086|ref|XP_003689644.1| PREDICTED: protein kibra-like [Apis florea]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 288 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 347

Query: 120 LR 121
           LR
Sbjct: 348 LR 349

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110755844|ref|XP_396884.3| PREDICTED: protein kibra-like isoform 2 [Apis mellifera]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 54/62 (87%), Positives = 58/62 (93%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           LVP+GTRLAEMARMRL+YDE RKRIQ IQ QLADLEEKVTPGQ ESDKD+L+LFQEKEQL
Sbjct: 288 LVPIGTRLAEMARMRLQYDEARKRIQHIQQQLADLEEKVTPGQTESDKDKLLLFQEKEQL 347

Query: 120 LR 121
           LR
Sbjct: 348 LR 349

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698382|ref|XP_001946853.2| PREDICTED: protein kibra-like isoform 1 [Acyrthosiphon pisum]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 55/62 (88%), Positives = 57/62 (91%)

Query: 60  LVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQL 119
           L+PMGTRLAEMARMRLEYDE RKRIQ IQ QLADLEEKV PGQ ESDKDRL+LFQEKEQL
Sbjct: 293 LMPMGTRLAEMARMRLEYDEARKRIQNIQQQLADLEEKVMPGQEESDKDRLLLFQEKEQL 352

Query: 120 LR 121
           LR
Sbjct: 353 LR 354

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
UNIPROTKB|B4NAD3	1288	Kibra "Protein kibra" [Drosoph	0.532	0.057	0.52	2.5e-12
UNIPROTKB|B4K6I9	1264	Kibra "Protein kibra" [Drosoph	0.460	0.050	0.569	5.1e-12
UNIPROTKB|B3LWS4	1271	Kibra "Protein kibra" [Drosoph	0.460	0.050	0.569	5.1e-12
UNIPROTKB|B4M5X4	1276	Kibra "Protein kibra" [Drosoph	0.460	0.050	0.569	5.1e-12
UNIPROTKB|B3P3M8	1283	Kibra "Protein kibra" [Drosoph	0.460	0.049	0.569	5.2e-12
UNIPROTKB|B4PSQ2	1288	Kibra "Protein kibra" [Drosoph	0.460	0.049	0.569	5.2e-12
UNIPROTKB|B4HEJ6	1295	Kibra "Protein kibra" [Drosoph	0.460	0.049	0.569	1.1e-11
FB|FBgn0262127	1288	kibra "kibra ortholog" [Drosop	0.460	0.049	0.553	2.3e-11
UNIPROTKB|E1BZA4	1125	WWC1 "Uncharacterized protein"	0.748	0.092	0.358	1.4e-10
UNIPROTKB|H0YBE8	889	WWC1 "Protein KIBRA" [Homo sap	0.748	0.116	0.339	3.2e-09

UNIPROTKB|B4NAD3 Kibra "Protein kibra" [Drosophila willistoni (taxid:7260)]

 Score = 179 (68.1 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 39/75 (52%), Positives = 53/75 (70%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   329 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 388

Query:   123 RSMSLIRWPIKDTIV 137
              S+SL    +++T V
Sbjct:   389 NSISLKSRSLEETQV 403

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B4K6I9 Kibra "Protein kibra" [Drosophila mojavensis (taxid:7230)]

 Score = 176 (67.0 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   315 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 374

Query:   123 RSMSL 127
              S+SL
Sbjct:   375 NSISL 379

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B3LWS4 Kibra "Protein kibra" [Drosophila ananassae (taxid:7217)]

 Score = 176 (67.0 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   322 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 381

Query:   123 RSMSL 127
              S+SL
Sbjct:   382 NSISL 386

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B4M5X4 Kibra "Protein kibra" [Drosophila virilis (taxid:7244)]

 Score = 176 (67.0 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   323 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 382

Query:   123 RSMSL 127
              S+SL
Sbjct:   383 NSISL 387

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B3P3M8 Kibra "Protein kibra" [Drosophila erecta (taxid:7220)]

 Score = 176 (67.0 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   330 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 389

Query:   123 RSMSL 127
              S+SL
Sbjct:   390 NSISL 394

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B4PSQ2 Kibra "Protein kibra" [Drosophila yakuba (taxid:7245)]

 Score = 176 (67.0 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 37/65 (56%), Positives = 48/65 (73%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ +L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   331 GARFAEMAKTKLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 390

Query:   123 RSMSL 127
              S+SL
Sbjct:   391 NSISL 395

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

UNIPROTKB|B4HEJ6 Kibra "Protein kibra" [Drosophila sechellia (taxid:7238)]

 Score = 173 (66.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+  L+Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   330 GARFAEMAKTTLQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 389

Query:   123 RSMSL 127
              S+SL
Sbjct:   390 NSISL 394

GO:0035330 "regulation of hippo signaling cascade" evidence=ISS

FB|FBgn0262127 kibra "kibra ortholog" [Drosophila melanogaster (taxid:7227)]

 Score = 170 (64.9 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 36/65 (55%), Positives = 47/65 (72%)

Query:    64 GTRLAEMARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS- 122
             G R AEMA+ + +Y E RK I+ +Q QLAD  E++ PGQ ESDKDR++L QEKE+LL   
Sbjct:   331 GARFAEMAKTKWQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL 390

Query:   123 RSMSL 127
              S+SL
Sbjct:   391 NSISL 395

GO:0035330 "regulation of hippo signaling cascade" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0001745 "compound eye morphogenesis" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0045177 "apical part of cell" evidence=IDA

GO:0060253 "negative regulation of glial cell proliferation" evidence=IMP

UNIPROTKB|E1BZA4 WWC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 38/106 (35%), Positives = 62/106 (58%)

Query:    26 DLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQ 85
             DL  S V+L     S L R+   + ++ + +   +     +LAE  R+RL Y+E ++RI 
Sbjct:   258 DLWASSVSLESSSPS-LPRQYLDVSSQTDVSGNFITSSNNQLAEKVRLRLRYEEAKRRIG 316

Query:    86 IIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS-RSMSLIRW 130
              ++ QLA L+ +  PG  +S++DRLIL  EKE+LL+  R +S  +W
Sbjct:   317 NLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEMRFISPRKW 362

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0035330 "regulation of hippo signaling cascade" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|H0YBE8 WWC1 "Protein KIBRA" [Homo sapiens (taxid:9606)]

 Score = 148 (57.2 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 36/106 (33%), Positives = 61/106 (57%)

Query:    26 DLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQ 85
             DL  S  +L        K+ L+ + ++ + +    +    +LAE  R+RL Y+E ++RI 
Sbjct:    35 DLWSSSSSLESSSFPLPKQYLD-VSSQTDISGSFGINSNNQLAEKVRLRLRYEEAKRRIA 93

Query:    86 IIQTQLADLEEKVTPGQAESDKDRLILFQEKEQLLRS-RSMSLIRW 130
              ++ QLA L+ +  PG  +S++DRLIL  EKE+LL+  R +S  +W
Sbjct:    94 NLKIQLAKLDSEAWPGVLDSERDRLILINEKEELLKEMRFISPRKW 139

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VFG8	KIBRA_DROME	No assigned EC number	0.5538	0.4604	0.0496	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
PF12443	106	AKNA: AT-hook-containing transcription factor; Int	88.55
PF09789	319	DUF2353: Uncharacterized coiled-coil protein (DUF2	88.09
PF12325	120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	87.99
PF13870	177	DUF4201: Domain of unknown function (DUF4201)	86.91
PF07888	546	CALCOCO1: Calcium binding and coiled-coil domain (	86.73
PF15290	305	Syntaphilin: Golgi-localised syntaxin-1-binding cl	86.27
TIGR02977	219	phageshock_pspA phage shock protein A. Members of	84.82
PRK10884	206	SH3 domain-containing protein; Provisional	83.8
PF10186	302	Atg14: UV radiation resistance protein and autopha	81.33

>PF12443 AKNA: AT-hook-containing transcription factor; InterPro: IPR022150 This domain family is found in eukaryotes, and is approximately 110 amino acids in length

Probab=88.55  E-value=0.92  Score=34.42  Aligned_cols=41  Identities=12%  Similarity=0.183  Sum_probs=35.5

Q ss_pred             CCCCCCCccCh-HHHHHHHHHHHHhHHHHHHHHHHHHHhHhH
Q psy16169         15 SSSSASTKYDV-DLLKSDVALARDRVSRLKRELEQIRTEMNY   55 (139)
Q Consensus        15 ~sSs~stKyDP-d~lkaeia~ar~Rv~rLKrEl~q~~~El~y   55 (139)
                      +++|++.+||| -.++++|..-+.|+..||-.+.+.++++.+
T Consensus        36 ~s~~sp~~f~~~~ege~~~qkL~eqteeLK~kvqe~sk~i~~   77 (106)
T PF12443_consen   36 DSSGSPGIFDKIREGEQMIQKLGEQTEELKDKVQEFSKRIEQ   77 (106)
T ss_pred             CCCCCccccCcchHHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Confidence            33446789999 799999999999999999999999888764

This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function

Probab=88.09  E-value=4.9  Score=35.31  Aligned_cols=73  Identities=22%  Similarity=0.363  Sum_probs=54.7

Q ss_pred             ChHHHHHHHHHHHHhHHHHHHHHHHHHHhHh--------Hhc-----c-CcCCCCC--cHHHHHHHHHhHHHHHHHHHHH
Q psy16169         24 DVDLLKSDVALARDRVSRLKRELEQIRTEMN--------YTQ-----R-GLVPMGT--RLAEMARMRLEYDETRKRIQII   87 (139)
Q Consensus        24 DPd~lkaeia~ar~Rv~rLKrEl~q~~~El~--------yke-----~-G~~~~~~--~LaEkvRl~lqYeEArkrv~~i   87 (139)
                      +-..|-..+..+|++...|+.|+..++|.+.        +++     + |+...++  ..-|+..+-.|.|.+++++.+|
T Consensus        66 ~~~~La~lL~~sre~Nk~L~~Ev~~Lrqkl~E~qGD~KlLR~~la~~r~~~~~~~~~~~~~ere~lV~qLEk~~~q~~qL  145 (319)
T PF09789_consen   66 ENKNLAQLLSESREQNKKLKEEVEELRQKLNEAQGDIKLLREKLARQRVGDEGIGARHFPHEREDLVEQLEKLREQIEQL  145 (319)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhhhhccccccccchHHHHHHHHHHHHHHHHHHH
Confidence            3456777889999999999999999998874        111     1 1222222  2279999999999999999999


Q ss_pred             HHHHHhhhh
Q psy16169         88 QTQLADLEE   96 (139)
Q Consensus        88 q~qLa~le~   96 (139)
                      +..+..+-+
T Consensus       146 e~d~qs~lD  154 (319)
T PF09789_consen  146 ERDLQSLLD  154 (319)
T ss_pred             HHHHHHHHH
Confidence            998876544

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []

Probab=87.99  E-value=8.2  Score=29.32  Aligned_cols=71  Identities=21%  Similarity=0.419  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHhHhHhccCcCCCCCcHHHHHHHHHhH---HHHHHHHHHHHHHHHhhhhccCCCCc
Q psy16169         27 LLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEY---DETRKRIQIIQTQLADLEEKVTPGQA  103 (139)
Q Consensus        27 ~lkaeia~ar~Rv~rLKrEl~q~~~El~yke~G~~~~~~~LaEkvRl~lqY---eEArkrv~~iq~qLa~le~e~wPG~~  103 (139)
                      ++-.|+++.+.++.+|..+=..+..|+                 ++|-..-   ....+++..++.++++|+.+-     
T Consensus        27 ~~E~E~~~l~~el~~l~~~r~~l~~Ei-----------------v~l~~~~e~~~~~~~~~~~L~~el~~l~~ry-----   84 (120)
T PF12325_consen   27 RLEGELASLQEELARLEAERDELREEI-----------------VKLMEENEELRALKKEVEELEQELEELQQRY-----   84 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            345677777777777777777777765                 3444444   444566888888888888731     


Q ss_pred             cCCcchhhhhHHHHHHHhh
Q psy16169        104 ESDKDRLILFQEKEQLLRS  122 (139)
Q Consensus       104 e~drDrL~Li~EKE~LL~E  122 (139)
                         -.-|.|+-||.+...|
T Consensus        85 ---~t~LellGEK~E~veE  100 (120)
T PF12325_consen   85 ---QTLLELLGEKSEEVEE  100 (120)
T ss_pred             ---HHHHHHhcchHHHHHH
Confidence               1238999999999888

The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].

>PF13870 DUF4201: Domain of unknown function (DUF4201)

Probab=86.91  E-value=9.3  Score=29.34  Aligned_cols=73  Identities=23%  Similarity=0.408  Sum_probs=51.5

Q ss_pred             hHHHHHHHHHHHHhHHHHHHHHHHHHHhHh---------HhccCcCCCCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q psy16169         25 VDLLKSDVALARDRVSRLKRELEQIRTEMN---------YTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLE   95 (139)
Q Consensus        25 Pd~lkaeia~ar~Rv~rLKrEl~q~~~El~---------yke~G~~~~~~~LaEkvRl~lqYeEArkrv~~iq~qLa~le   95 (139)
                      -..++.+|+.....+.+++.++.+++.+-.         -.+.|++....=+.|..+..-.+++-++.|..++...+.++
T Consensus        93 ~~~l~~~l~~~~~~~~~~r~~l~~~k~~r~k~~~~~~~l~~~~~~~~~P~ll~Dy~~~~~~~~~l~~~i~~l~rk~~~l~  172 (177)
T PF13870_consen   93 LERLKQELKDREEELAKLREELYRVKKERDKLRKQNKKLRQQGGLLGVPALLRDYDKTKEEVEELRKEIKELERKVEILE  172 (177)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356777888887778888877777777644         22345554444445788888888888888888888877776


Q ss_pred             hc
Q psy16169         96 EK   97 (139)
Q Consensus        96 ~e   97 (139)
                      ..
T Consensus       173 ~~  174 (177)
T PF13870_consen  173 MR  174 (177)
T ss_pred             Hh
Confidence            53

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)

Probab=86.73  E-value=3  Score=39.07  Aligned_cols=72  Identities=29%  Similarity=0.412  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHhHhHh---ccCcCCCCCc-HHHHHHHHHhHHHHHHHHHHHHHHHHhhhhcc
Q psy16169         27 LLKSDVALARDRVSRLKRELEQIRTEMNYT---QRGLVPMGTR-LAEMARMRLEYDETRKRIQIIQTQLADLEEKV   98 (139)
Q Consensus        27 ~lkaeia~ar~Rv~rLKrEl~q~~~El~yk---e~G~~~~~~~-LaEkvRl~lqYeEArkrv~~iq~qLa~le~e~   98 (139)
                      .|+.++...+.+|.+|+.+|.+.+.++.-=   .+++...... -.|..-|..++++++.||..+...+..+..+.
T Consensus       161 ~Le~e~~~l~~~v~~l~~eL~~~~ee~e~L~~~~kel~~~~e~l~~E~~~L~~q~~e~~~ri~~LEedi~~l~qk~  236 (546)
T PF07888_consen  161 QLEEEVEQLREEVERLEAELEQEEEEMEQLKQQQKELTESSEELKEERESLKEQLAEARQRIRELEEDIKTLTQKE  236 (546)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677777777777777777766665411   1112211112 25677888999999999999999999888766

This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].

>PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp

Probab=86.27  E-value=4.8  Score=35.52  Aligned_cols=35  Identities=26%  Similarity=0.402  Sum_probs=26.0

Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHhhhhccCCCCccCCcc
Q psy16169         70 MARMRLEYDETRKRIQIIQTQLADLEEKVTPGQAESDKD  108 (139)
Q Consensus        70 kvRl~lqYeEArkrv~~iq~qLa~le~e~wPG~~e~drD  108 (139)
                      +|...|-..||||.|+.|++-+.-.-+    .++|.|++
T Consensus       112 RVEAQLALKEARkEIkQLkQvieTmrs----sL~ekDkG  146 (305)
T PF15290_consen  112 RVEAQLALKEARKEIKQLKQVIETMRS----SLAEKDKG  146 (305)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh----hhchhhhh
Confidence            788888999999999999987655443    44454544

>TIGR02977 phageshock_pspA phage shock protein A

Probab=84.82  E-value=6.9  Score=31.35  Aligned_cols=70  Identities=16%  Similarity=0.293  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhHh-HhccC---cCCCCCcHHHH------------HHHHHhHHHHHHHHHHHHHHH
Q psy16169         28 LKSDVALARDRVSRLKRELEQIRTEMN-YTQRG---LVPMGTRLAEM------------ARMRLEYDETRKRIQIIQTQL   91 (139)
Q Consensus        28 lkaeia~ar~Rv~rLKrEl~q~~~El~-yke~G---~~~~~~~LaEk------------vRl~lqYeEArkrv~~iq~qL   91 (139)
                      .+..++.+...-.++++++.+...... |..+.   +-.+...||..            .+|.-+|+..+..|..++.+|
T Consensus        43 ar~~lA~~~a~~k~~e~~~~~~~~~~~~~~~~A~~Al~~G~EdLAr~Al~~k~~~~~~~~~l~~~~~~~~~~v~~l~~~l  122 (219)
T TIGR02977        43 VRTTSARTIADKKELERRVSRLEAQVADWQEKAELALSKGREDLARAALIEKQKAQELAEALERELAAVEETLAKLQEDI  122 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344455555555666666666666665 33333   34455555543            467778888888899999888


Q ss_pred             Hhhhhc
Q psy16169         92 ADLEEK   97 (139)
Q Consensus        92 a~le~e   97 (139)
                      ..|+.+
T Consensus       123 ~~L~~k  128 (219)
T TIGR02977       123 AKLQAK  128 (219)
T ss_pred             HHHHHH
Confidence            888774

Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by PFAM model pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects.

>PRK10884 SH3 domain-containing protein; Provisional

Probab=83.80  E-value=4.3  Score=33.13  Aligned_cols=21  Identities=24%  Similarity=0.480  Sum_probs=12.3

Q ss_pred             HHHHhHHHHHHHHHHHHHhHh
Q psy16169         34 LARDRVSRLKRELEQIRTEMN   54 (139)
Q Consensus        34 ~ar~Rv~rLKrEl~q~~~El~   54 (139)
                      .++.|+.+|.+|++..+.+|.
T Consensus        90 ~~~~rlp~le~el~~l~~~l~  110 (206)
T PRK10884         90 SLRTRVPDLENQVKTLTDKLN  110 (206)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH
Confidence            455666666666666655554

>PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking

Probab=81.33  E-value=11  Score=29.74  Aligned_cols=38  Identities=21%  Similarity=0.498  Sum_probs=30.3

Q ss_pred             ccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHhHhccC
Q psy16169         22 KYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRG   59 (139)
Q Consensus        22 KyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~yke~G   59 (139)
                      .-.-..++.++...+.|+..|+.++.+++.++.-+...
T Consensus        55 ~~~~~~~~~~~~~~~~r~~~l~~~i~~~~~~i~~~r~~   92 (302)
T PF10186_consen   55 LLEIQQLKREIEELRERLERLRERIERLRKRIEQKRER   92 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456788889999999999998888888888766655

In yeast, two distinct PI3-kinase complexes are known: complex I (Vps34, Vps15, Vps30/Atg6, and Atg14) is involved in autophagy, and complex II (Vps34, Vps15, Vps30/Atg6, and Vps38) functions in the vacuolar protein sorting pathway. In mammals, the counterparts of Vps34, Vps15, and Vps30/Atg6 are Vps34, p150, and Beclin 1, respectively. Mammalian UV irradiation resistance-associated gene (UVRAG) has been identified as identical to yeast Vps38 []. The Atg14 (autophagy-related protein 14) proteins are hydrophilic proteins and have a coiled-coil motif at the N terminus region. Yeast cells with mutant Atg14 are defective not only in autophagy but also in sorting of carboxypeptidase Y (CPY), a vacuolar-soluble hydrolase, to the vacuole []. This entry represents Atg14 and UVRAG, which bind Beclin 1 to forms two distinct PI3-kinase complexes. This entry also includes Bakor (beclin-1-associated autophagy-related key regulator), also known as autophagy-related protein 14-like protein, which share sequence similarity to the yeast Atg14 protein []. Barkor positively regulates autophagy through its interaction with Beclin-1, with decreased levels of autophagosome formation observed when Barkor expression is eliminated []. Autophagy mediates the cellular response to nutrient deprivation, protein aggregation, and pathogen invasion in humans, and malfunction of autophagy has been implicated in multiple human diseases including cancer. ; GO: 0010508 positive regulation of autophagy

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 13  CSSSSSASTKYD--VDLLKSDV-ALARDRVSR------LKRELEQIRTEMNYTQRGLVPM 63
               S  +  Y    D L +D    A+  VSR      L++ L ++R   N    G++  
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS 161

Query: 64  G-TRLA-EMAR--------------MRL-EYDETRKRIQIIQTQLADLEEKVTPGQAESD 106
           G T +A ++                + L   +     ++++Q  L  ++   T     S 
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 107 KDRLILFQEKEQLLR 121
             +L +   + +L R
Sbjct: 222 NIKLRIHSIQAELRR 236

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
2f1m_A	277	Acriflavine resistance protein A; helical hairpin,	92.37
4dk0_A	369	Putative MACA; alpha-hairpin, lipoyl, beta-barrel,	91.37
3hnw_A	138	Uncharacterized protein; coiled-coil, structural g	87.65
3fpp_A	341	Macrolide-specific efflux protein MACA; hexameric	86.92
1use_A	45	VAsp, vasodilator-stimulated phosphoprotein; signa	84.6
2yy0_A	53	C-MYC-binding protein; conserved hypothetical prot	84.3

>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}

Probab=92.37  E-value=1.3  Score=33.61  Aligned_cols=74  Identities=8%  Similarity=0.056  Sum_probs=49.3

Q ss_pred             ccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHhHhccCcCCCCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhhh
Q psy16169         22 KYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLE   95 (139)
Q Consensus        22 KyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~yke~G~~~~~~~LaEkvRl~lqYeEArkrv~~iq~qLa~le   95 (139)
                      .+|+..+.++++.++..+...+.++...+.++.=.+.=+-.+..--.+.-....+|+.|+..++..+.+|+.+.
T Consensus        52 ~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~  125 (277)
T 2f1m_A           52 QIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETAR  125 (277)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999998888877522111111112233445556677777777766666665443

>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A

Probab=91.37  E-value=1.3  Score=34.95  Aligned_cols=73  Identities=10%  Similarity=0.191  Sum_probs=45.6

Q ss_pred             ccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHhHhccC------c-CCCCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy16169         22 KYDVDLLKSDVALARDRVSRLKRELEQIRTEMNYTQRG------L-VPMGTRLAEMARMRLEYDETRKRIQIIQTQLADL   94 (139)
Q Consensus        22 KyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~yke~G------~-~~~~~~LaEkvRl~lqYeEArkrv~~iq~qLa~l   94 (139)
                      .+|+..+..++..++..+..++.++.+.+.++...+.-      + -.+...-.+.-....+|+.|+..++.++.++..+
T Consensus        62 ~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~~~~~~~~l~~~  141 (369)
T 4dk0_A           62 EIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQA  141 (369)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999888888888888888888888777744432      1 1111112233334455666666665555554443

>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}

Probab=87.65  E-value=3.6  Score=30.60  Aligned_cols=56  Identities=14%  Similarity=0.303  Sum_probs=37.2

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHhHh-HhccCcCCCCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy16169         30 SDVALARDRVSRLKRELEQIRTEMN-YTQRGLVPMGTRLAEMARMRLEYDETRKRIQIIQTQLADLEE   96 (139)
Q Consensus        30 aeia~ar~Rv~rLKrEl~q~~~El~-yke~G~~~~~~~LaEkvRl~lqYeEArkrv~~iq~qLa~le~   96 (139)
                      .|.-.++..+..|..++..+..|+. ||.           |-+.+..+|+++++.+..++.++..|+.
T Consensus        68 dEl~k~~~~~~~L~~~l~~~~kE~~~lK~-----------el~~~~~k~e~~~~e~~~l~~~~~~l~~  124 (138)
T 3hnw_A           68 DDYFKAKKMADSLSLDIENKDKEIYDLKH-----------ELIAAQIKAESSAKEIKELKSEINKYQK  124 (138)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3555666677777777777777765 443           4667777787777776666666655554

>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}

Probab=86.92  E-value=2.5  Score=32.98  Aligned_cols=34  Identities=12%  Similarity=0.213  Sum_probs=27.5

Q ss_pred             ccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHhH
Q psy16169         22 KYDVDLLKSDVALARDRVSRLKRELEQIRTEMNY   55 (139)
Q Consensus        22 KyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~y   55 (139)
                      .+|+..+.+++..++..+..++.++.+.+.++..
T Consensus        61 ~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~   94 (341)
T 3fpp_A           61 VIDPEQAENQIKEVEATLMELRAQRQQAEAELKL   94 (341)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7899988888888888888888888777777653

>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A

Probab=84.60  E-value=0.88  Score=29.16  Aligned_cols=30  Identities=23%  Similarity=0.491  Sum_probs=24.7

Q ss_pred             CCCccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHh
Q psy16169         19 ASTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMN   54 (139)
Q Consensus        19 ~stKyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~   54 (139)
                      +.+-.|-|.+|.||      +..+|+|+.+||+|+-
T Consensus         3 ~~~~~dle~~KqEI------L~E~RkElqK~K~EII   32 (45)
T 1use_A            3 SSDYSDLQRVKQEL------LEEVKKELQKVKEEII   32 (45)
T ss_dssp             CCCHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence            45568899999999      5688999999998874

>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}

Probab=84.30  E-value=1.6  Score=28.06  Aligned_cols=36  Identities=11%  Similarity=0.374  Sum_probs=31.5

Q ss_pred             CCCccChHHHHHHHHHHHHhHHHHHHHHHHHHHhHh
Q psy16169         19 ASTKYDVDLLKSDVALARDRVSRLKRELEQIRTEMN   54 (139)
Q Consensus        19 ~stKyDPd~lkaeia~ar~Rv~rLKrEl~q~~~El~   54 (139)
                      +++.-|-|-||.|++..|.|+..|+.++...+..|-
T Consensus        15 ~p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~   50 (53)
T 2yy0_A           15 TPENPEIELLRLELAEMKEKYEAIVEENKKLKAKLA   50 (53)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456679999999999999999999999999888764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00