Psyllid ID: psy16174

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
LHDQTVSEVLSSRKRRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
cccccccEEEccccccccccHHHHHHHHHcccEEEccccccccHHHccccccccccccEEccccEEEEEcccccEEEEEEEcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccHHHHHHHHHcc
ccccEEEEEcccccccccccHHHHHHHHHcccEEEcccccccccccccEEccccccccccccccEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccHHHHHHHHHHcc
LHDQTVSEVLSSRkrrqgrnqpfrertlsvqnnirpgresnpgpsadkegketmrlpkltalpdvtlrkLSTDWEFLVIACDGiwdvmtneEVSDFVRMRigsgmepeeICEDLMtrclapdcqmgglgcdnMTVVIVCFLhgnpysslvnkcallq
lhdqtvsevlssrkrrqgrnqpfrertlsvqnnirpgresnpgpsadkegketmrlpkltalpdvtlrKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
LHDQTVSEVLSSRKRRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
**********************************************************LTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCAL**
******S*******************TLSVQNNIRPGRESNPGPSADKEGKETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPY***VNKCAL**
**********************FRERTLSVQNNIRPGR*************ETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
*HDQTVSEVLSSRKRRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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LHDQTVSEVLSSRKRRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRLPKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCALLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query157 2.2.26 [Sep-21-2011]
P49596356 Probable protein phosphat yes N/A 0.611 0.269 0.645 5e-33
Q09173 414 Protein phosphatase 2C ho yes N/A 0.611 0.231 0.5 6e-21
Q09172370 Protein phosphatase 2C ho no N/A 0.624 0.264 0.470 2e-20
Q4R4V2547 Protein phosphatase 1G OS N/A N/A 0.522 0.149 0.488 2e-19
O15355546 Protein phosphatase 1G OS yes N/A 0.522 0.150 0.488 2e-19
Q61074542 Protein phosphatase 1G OS yes N/A 0.522 0.151 0.488 2e-19
P79126543 Protein phosphatase 1G OS yes N/A 0.522 0.151 0.488 2e-18
O81716355 Probable protein phosphat yes N/A 0.770 0.340 0.392 1e-17
Q9SZ53357 Probable protein phosphat no N/A 0.770 0.338 0.392 1e-17
Q7K4Q5662 Probable protein phosphat no N/A 0.605 0.143 0.444 5e-17
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=3 SV=2 Back     alignment and function desciption
 Score =  139 bits (351), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 75/96 (78%)

Query: 59  LTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRC 118
           +TA PDV   KL+ D EF+V+ACDGIWDVMTN+EV DFVR ++    +P+ ICE+L+TRC
Sbjct: 205 VTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRC 264

Query: 119 LAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCA 154
           LAPDCQMGGLGCDNMTVV+V  LHG    +L  KCA
Sbjct: 265 LAPDCQMGGLGCDNMTVVLVGLLHGQSPDTLFTKCA 300

Caenorhabditis elegans (taxid: 6239)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q09173|PP2C3_SCHPO Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc3 PE=3 SV=1 Back     alignment and function description
>sp|Q09172|PP2C2_SCHPO Protein phosphatase 2C homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ptc2 PE=3 SV=1 Back     alignment and function description
>sp|Q4R4V2|PPM1G_MACFA Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1 Back     alignment and function description
>sp|O15355|PPM1G_HUMAN Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1 Back     alignment and function description
>sp|Q61074|PPM1G_MOUSE Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3 Back     alignment and function description
>sp|P79126|PPM1G_BOVIN Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2 Back     alignment and function description
>sp|O81716|P2C21_ARATH Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZ53|P2C60_ARATH Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1 Back     alignment and function description
>sp|Q7K4Q5|Y0417_DROME Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
242006833 310 protein phosphatase 2C, putative [Pedicu 0.611 0.309 0.729 2e-37
21357195 371 CG17746, isoform A [Drosophila melanogas 0.605 0.256 0.705 1e-35
241155743 347 PP2C, putative [Ixodes scapularis] gi|21 0.611 0.276 0.677 2e-35
427787967 350 Putative protein phosphatase 2c [Rhipice 0.611 0.274 0.677 2e-35
195454859 391 GK10512 [Drosophila willistoni] gi|19417 0.605 0.242 0.705 2e-35
195174379 375 GL21276 [Drosophila persimilis] gi|19846 0.605 0.253 0.694 6e-35
195125305 328 GI12760 [Drosophila mojavensis] gi|19391 0.611 0.292 0.687 8e-35
195587436 370 GD13337 [Drosophila simulans] gi|1941954 0.605 0.256 0.694 9e-35
195337110 370 GM14062 [Drosophila sechellia] gi|194128 0.605 0.256 0.694 9e-35
194866036 370 GG14269 [Drosophila erecta] gi|190653508 0.605 0.256 0.694 9e-35
>gi|242006833|ref|XP_002424249.1| protein phosphatase 2C, putative [Pediculus humanus corporis] gi|212507618|gb|EEB11511.1| protein phosphatase 2C, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 81/96 (84%)

Query: 59  LTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRC 118
           +TA PDV  R ++ +WEF+V+ACDGIWDVMTNEEV DFVR RIG GM PE+ICEDLM+RC
Sbjct: 205 ITAYPDVQTRTITPEWEFIVMACDGIWDVMTNEEVVDFVRNRIGGGMCPEDICEDLMSRC 264

Query: 119 LAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKCA 154
           LAPD QMGGLGCDNMTV+I+ FLHG PY +L  KCA
Sbjct: 265 LAPDIQMGGLGCDNMTVIIIAFLHGEPYENLCAKCA 300

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|21357195|ref|NP_647794.1| CG17746, isoform A [Drosophila melanogaster] gi|24656655|ref|NP_728844.1| CG17746, isoform B [Drosophila melanogaster] gi|7292339|gb|AAF47746.1| CG17746, isoform A [Drosophila melanogaster] gi|7292340|gb|AAF47747.1| CG17746, isoform B [Drosophila melanogaster] gi|17944258|gb|AAL48023.1| LD28127p [Drosophila melanogaster] gi|220946950|gb|ACL86018.1| CG17746-PA [synthetic construct] gi|220956508|gb|ACL90797.1| CG17746-PA [synthetic construct] Back     alignment and taxonomy information
>gi|241155743|ref|XP_002407635.1| PP2C, putative [Ixodes scapularis] gi|215494155|gb|EEC03796.1| PP2C, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|427787967|gb|JAA59435.1| Putative protein phosphatase 2c [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|195454859|ref|XP_002074440.1| GK10512 [Drosophila willistoni] gi|194170525|gb|EDW85426.1| GK10512 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|195174379|ref|XP_002027954.1| GL21276 [Drosophila persimilis] gi|198463081|ref|XP_001352676.2| GA14642 [Drosophila pseudoobscura pseudoobscura] gi|194115664|gb|EDW37707.1| GL21276 [Drosophila persimilis] gi|198151107|gb|EAL30175.2| GA14642 [Drosophila pseudoobscura pseudoobscura] Back     alignment and taxonomy information
>gi|195125305|ref|XP_002007121.1| GI12760 [Drosophila mojavensis] gi|193918730|gb|EDW17597.1| GI12760 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195587436|ref|XP_002083468.1| GD13337 [Drosophila simulans] gi|194195477|gb|EDX09053.1| GD13337 [Drosophila simulans] Back     alignment and taxonomy information
>gi|195337110|ref|XP_002035173.1| GM14062 [Drosophila sechellia] gi|194128266|gb|EDW50309.1| GM14062 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|194866036|ref|XP_001971725.1| GG14269 [Drosophila erecta] gi|190653508|gb|EDV50751.1| GG14269 [Drosophila erecta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query157
FB|FBgn0035425371 CG17746 [Drosophila melanogast 0.605 0.256 0.705 1.9e-35
WB|WBGene00011953356 ppm-2 [Caenorhabditis elegans 0.611 0.269 0.645 1.6e-31
FB|FBgn0035143352 Ppm1 "Ppm1" [Drosophila melano 0.656 0.292 0.509 1.8e-25
POMBASE|SPCC1223.11370 ptc2 "protein phosphatase 2C P 0.617 0.262 0.475 1.2e-20
POMBASE|SPAC2G11.07c 414 ptc3 "protein phosphatase 2c h 0.611 0.231 0.5 2.6e-20
ASPGD|ASPL0000056464 420 AN1358 [Emericella nidulans (t 0.611 0.228 0.479 4.6e-20
UNIPROTKB|O15355546 PPM1G "Protein phosphatase 1G" 0.522 0.150 0.488 2e-19
TAIR|locus:2116777357 AT4G31860 [Arabidopsis thalian 0.770 0.338 0.4 1.2e-18
UNIPROTKB|F1LNI5145 Ppm1g "Protein Ppm1g" [Rattus 0.522 0.565 0.488 1.4e-18
TAIR|locus:2047344355 AT2G25070 [Arabidopsis thalian 0.770 0.340 0.392 4.6e-18
FB|FBgn0035425 CG17746 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 67/95 (70%), Positives = 77/95 (81%)

Query:    59 LTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRC 118
             +TA PDV  RK+  DWEF+V+ACDGIWDVM+N EV +F R RIG GM PEEICE+LM  C
Sbjct:   203 VTAFPDVETRKIMDDWEFIVLACDGIWDVMSNAEVLEFCRTRIGMGMFPEEICEELMNHC 262

Query:   119 LAPDCQMGGLGCDNMTVVIVCFLHGNPYSSLVNKC 153
             LAPDCQMGGLG DNMTVV+VC LHG PYS L+ +C
Sbjct:   263 LAPDCQMGGLGGDNMTVVLVCLLHGRPYSDLIARC 297
GO:0006470 "protein dephosphorylation" evidence=IEA;NAS
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;NAS
WB|WBGene00011953 ppm-2 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0035143 Ppm1 "Ppm1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
POMBASE|SPCC1223.11 ptc2 "protein phosphatase 2C Ptc2" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPAC2G11.07c ptc3 "protein phosphatase 2c homolog 3" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|O15355 PPM1G "Protein phosphatase 1G" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2116777 AT4G31860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1LNI5 Ppm1g "Protein Ppm1g" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49596PP2C2_CAEEL3, ., 1, ., 3, ., 1, 60.64580.61140.2696yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-23
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-21
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-19
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-12
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-10
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 0.002
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score = 90.8 bits (226), Expect = 4e-23
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)

Query: 57  PKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMT 116
           P ++A PDVT+ KL+ D +FL++A DG+WDV++N+E  D VR  +      +E  ++L+ 
Sbjct: 178 PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKED-LQEAAQELVD 236

Query: 117 RCLAPDCQMGGLGCDNMTVVIVCF 140
             L           DN+TVV+V  
Sbjct: 237 LALRRG------SHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 157
KOG0697|consensus379 99.97
KOG0698|consensus330 99.96
PLN03145365 Protein phosphatase 2c; Provisional 99.95
KOG0699|consensus542 99.95
PTZ00224381 protein phosphatase 2C; Provisional 99.93
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.93
KOG0700|consensus390 99.82
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 99.79
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.74
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 99.74
KOG0618|consensus 1081 99.65
PRK14559645 putative protein serine/threonine phosphatase; Pro 99.55
KOG1323|consensus493 99.51
KOG1379|consensus330 98.9
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 98.32
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 98.18
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 97.73
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.33
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 95.98
>KOG0697|consensus Back     alignment and domain information 
Probab=99.97  E-value=9e-31  Score=207.52  Aligned_cols=126  Identities=31%  Similarity=0.530  Sum_probs=117.8

Q ss_pred             hhcCCChhhHHHHHHCCCEEecCCCCCCcccccccCCCCCC--------CCCeeeeceEEEEEecCCCeEEEEecCCccc
Q psy16174         15 RRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMR--------LPKLTALPDVTLRKLSTDWEFLVIACDGIWD   86 (157)
Q Consensus        15 ~r~~~~~~E~~Ri~~~gg~i~~~R~~g~g~~sr~~gd~~~k--------~~~vs~~Pdv~~~~l~~~d~flilaSDGlwd   86 (157)
                      ...+-++.|++||+.+||.+.-.|++|.+.+||++||+.+|        ++.||++|||........|+|+||||||+||
T Consensus       163 DHKP~~p~EkeRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwD  242 (379)
T KOG0697|consen  163 DHKPYLPKEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWD  242 (379)
T ss_pred             CCCCCChHHHHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhh
Confidence            34567889999999999999999999999999999999876        4699999999999999888899999999999


Q ss_pred             ccCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCCCCCCCCeeEEEEEecCCCCc
Q psy16174         87 VMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGNPY  146 (157)
Q Consensus        87 ~ls~~~~~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~DNiTvivv~~~~~~~~  146 (157)
                      +|+++|++++|++.+.-..++.++|+.+++.|+.+|+      +||||+++|.|..+|..
T Consensus       243 VMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGS------RDNMsivlvcfp~APkv  296 (379)
T KOG0697|consen  243 VMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGS------RDNMSIVLVCFPGAPKV  296 (379)
T ss_pred             hcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccC------ccCceEEEEecCCCCCC
Confidence            9999999999999998889999999999999999999      99999999999988754

>KOG0698|consensus Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0700|consensus Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 3e-18
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 9e-12
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-11
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-09
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-05
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-04
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-04
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-04
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-04
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-04
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-04
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 3e-04
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-04
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-04
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-04
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-04
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 59  LTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGS-GMEPEEICEDLMTR 117
           ++ALPD+    +  + EF+V+ACDGIW+ MT+E+V  FV+ RI   GM+  +ICE+L   
Sbjct: 221 ISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDH 280
Query: 118 CLAPDCQMGGLGCDNMTVVIVCF 140
           CLAP  +  G GCDNMT +IV F
Sbjct: 281 CLAPHTRGDGTGCDNMTAIIVQF 303
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query157
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-38
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-38
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-35
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-33
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-31
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-29
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 7e-29
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-28
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 9e-27
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 5e-26
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-24
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-23
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-16
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
 Score =  132 bits (333), Expect = 1e-38
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 6/91 (6%)

Query: 57  PKLTALPDVTLRKLSTDWEFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMT 116
             ++  P+V     + + EF+++ACDGIWDVM+NEE+ ++V+ R+    + E +C  ++ 
Sbjct: 220 QLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVD 279

Query: 117 RCLAPDCQMGGLGCDNMTVVIVCFLHGNPYS 147
            CL           DNM++V+VCF +   + 
Sbjct: 280 TCLHKGS------RDNMSIVLVCFSNEGHHH 304
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query157
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 99.94
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.94
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 99.93
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.93
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.93
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 99.92
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 99.92
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.92
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.92
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.91
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.91
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.91
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 99.9
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 99.77
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 99.73
1txo_A237 Putative bacterial enzyme; serine/threonine protei 99.73
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 99.71
3rnr_A211 Stage II sporulation E family protein; structural 99.51
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 98.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 98.69
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 98.6
3f79_A255 Probable two-component response regulator; adaptor 98.51
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 97.57
3eq2_A394 Probable two-component response regulator; adaptor 95.8
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=99.94  E-value=1.7e-27  Score=192.48  Aligned_cols=128  Identities=27%  Similarity=0.475  Sum_probs=110.5

Q ss_pred             CccccccccchhhhcCCChhhHHHHHHCCCEEecCCCCCCcccccccCCCCCCC--------CCeeeeceEEEEEecCCC
Q psy16174          3 DQTVSEVLSSRKRRQGRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRL--------PKLTALPDVTLRKLSTDW   74 (157)
Q Consensus         3 ~~t~~~~l~~e~~r~~~~~~E~~Ri~~~gg~i~~~R~~g~g~~sr~~gd~~~k~--------~~vs~~Pdv~~~~l~~~d   74 (157)
                      ++|.||.+.        ...|+.||...||.+.+.|++|...++|++||..+|.        |+|+++|++..+++.++|
T Consensus       166 ~lT~DH~~~--------~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d  237 (307)
T 2p8e_A          166 FSTQDHKPC--------NPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEED  237 (307)
T ss_dssp             EECCCCCTT--------SHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTE
T ss_pred             cCCCCCCCC--------CHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCC
Confidence            455555543        3569999999999999999998888999999987663        578999999999999888


Q ss_pred             eEEEEecCCcccccCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCCCCCCCCeeEEEEEecCCC
Q psy16174         75 EFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGN  144 (157)
Q Consensus        75 ~flilaSDGlwd~ls~~~~~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~DNiTvivv~~~~~~  144 (157)
                      +|||||||||||+++++++++++.+.+....+++++|+.|++.|+.+++      .||||||||+|...+
T Consensus       238 ~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~------~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          238 EFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGS------RDNMSIVLVCFSNEG  301 (307)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTC------CSCEEEEEEEC----
T ss_pred             eEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC------CCCeEEEEEECCCCC
Confidence            8999999999999999999999998766567899999999999999998      999999999997653
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 157
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-17
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-08
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (182), Expect = 2e-17
 Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 7/79 (8%)

Query: 63  PDVTLRKLSTDW-EFLVIACDGIWDVMTNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAP 121
           P+V   + S +  +F+++ACDGIWDVM NEE+ DFVR R+    + E++C +++  CL  
Sbjct: 218 PEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK 277

Query: 122 DCQMGGLGCDNMTVVIVCF 140
                    DNM+V+++CF
Sbjct: 278 G------SRDNMSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query157
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 99.96
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 99.77
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-29  Score=199.79  Aligned_cols=121  Identities=31%  Similarity=0.543  Sum_probs=111.2

Q ss_pred             CCChhhHHHHHHCCCEEecCCCCCCcccccccCCCCCCC--------CCeeeeceEEEEEec-CCCeEEEEecCCccccc
Q psy16174         18 GRNQPFRERTLSVQNNIRPGRESNPGPSADKEGKETMRL--------PKLTALPDVTLRKLS-TDWEFLVIACDGIWDVM   88 (157)
Q Consensus        18 ~~~~~E~~Ri~~~gg~i~~~R~~g~g~~sr~~gd~~~k~--------~~vs~~Pdv~~~~l~-~~d~flilaSDGlwd~l   88 (157)
                      +....|+.||.+.||.+...|++|...++|++||..+|.        ++|+++|+|..+++. ++++|||||||||||+|
T Consensus       165 ~~~~~E~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l  244 (295)
T d1a6qa2         165 PSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVM  244 (295)
T ss_dssp             TTSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTS
T ss_pred             cccHHHHhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccC
Confidence            356789999999999999999999999999999987763        469999999999987 77889999999999999


Q ss_pred             CHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhCCCCCCCCCCCCeeEEEEEecCCC
Q psy16174         89 TNEEVSDFVRMRIGSGMEPEEICEDLMTRCLAPDCQMGGLGCDNMTVVIVCFLHGN  144 (157)
Q Consensus        89 s~~~~~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~DNiTvivv~~~~~~  144 (157)
                      +++++++++++.+..+.+++.+|+.|++.|+.+++      .||||||||+|+..|
T Consensus       245 ~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs------~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         245 GNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGS------RDNMSVILICFPNAP  294 (295)
T ss_dssp             CHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTC------CSCEEEEEEECTTSC
T ss_pred             CHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCC------CCCeEEEEEeccCCC
Confidence            99999999999888888999999999999999999      999999999998754
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure