Psyllid ID: psy16208

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MFSVMDTLQKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGTSKPVRRKASTPSLKSNSLANLDLFNNKMNMINYNSTR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHcccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccEcccccccccccccccccc
Coil and Loop (DISEMBL)
mfsvmdtlqkdedetdnpelgidnvGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCygtskpvrrkastpslksnslanldlfnnkmnminynstr
Flexible Loop (DISEMBL)
mfsvmdtlqkdedetdnpelGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGtskpvrrkastpslksnslanldlfnnkmnminynstr
Low Complexity Region (SEG)
MFSVMDTLQKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGTSKPVRRKASTPSLKSNSLANLDLFNNKMNMINYNSTR
Disordered region (IsUnstruct)
*******************LGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGT*************************************
Disordered Region (DISOPRED)
*F*********************NVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIR*****************************************
Disordered Region (DISEMBL)
MFSVMDTLQKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGTSK***********KSNSLANLDLFNNKMNMINYNSTR
Disordered Region (DISPRO)
******************ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGT******************ANLDLFNNKMN********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFSVMDTLQKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGTSKPVRRKASTPSLKSNSLANLDLFNNKMNMINYNSTR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q38PU2	919	Glutamate receptor ionotr	N/A	N/A	0.801	0.101	0.309	3e-08
Q13003	919	Glutamate receptor ionotr	yes	N/A	0.801	0.101	0.309	3e-08
Q01812	956	Glutamate receptor ionotr	yes	N/A	0.655	0.079	0.397	4e-08
B1AS29	919	Glutamate receptor ionotr	yes	N/A	0.801	0.101	0.298	5e-08
Q63273	979	Glutamate receptor ionotr	no	N/A	0.594	0.070	0.371	5e-08
Q61626	979	Glutamate receptor ionotr	no	N/A	0.594	0.070	0.371	5e-08
P42264	919	Glutamate receptor ionotr	no	N/A	0.801	0.101	0.298	5e-08
Q91755	285	Glutamate receptor ionotr	N/A	N/A	0.801	0.326	0.309	6e-08
Q16478	980	Glutamate receptor ionotr	no	N/A	0.594	0.070	0.357	6e-08
P39087	908	Glutamate receptor ionotr	no	N/A	0.801	0.102	0.309	6e-08

>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis GN=GRIK3 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LGI  +GG+F+VL AG  +S L ++ EF++ +RK A  E+ S       E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEI 866

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           +F++ C    + V+ K   P + K++++ N+  FN++
Sbjct: 867 RFSLTC---QRRVKHKPQPPMMVKTDAVINMHTFNDR 900

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.
Macaca fascicularis (taxid: 9541)

>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3 PE=2 SV=3

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LGI  +GG+F+VL AG  +S L ++ EF++ +RK A  E+ S       E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLRKTAEREQRSFCSTVADEI 866

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           +F++ C    + V+ K   P + K++++ N+  FN++
Sbjct: 867 RFSLTC---QRRVKHKPQPPMMVKTDAVINMHTFNDR 900

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.

Homo sapiens (taxid: 9606)

>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus GN=Grik4 PE=2 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           K+ED      LG++N+GG+FVVLI G  V+   ++LEFLW +R     E +S  +  M E
Sbjct: 791 KEEDHRAK-GLGMENIGGIFVVLICGLIVAIFMAMLEFLWTLRHSEASE-VSVCQEMMTE 848

Query: 70  LKFAIRCYGTSKPVRRKA 87
           L+  I C     P RR++
Sbjct: 849 LRSIILCQDNIHPRRRRS 866

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds kainate > quisqualate > glutamate >> AMPA.

Rattus norvegicus (taxid: 10116)

>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3 PE=2 SV=1

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LGI  +GG+F+VL AG  +S L ++ EF++ +RK A  E+ S       E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRKTAEREQRSFCSTVADEI 866

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           +F++ C    + ++ K   P + K++++ N+  FN++
Sbjct: 867 RFSLTC---QRRLKHKPQPPMMVKTDAVINMHTFNDR 900

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.

Mus musculus (taxid: 10090)

>sp|Q63273|GRIK5_RAT Glutamate receptor ionotropic, kainate 5 OS=Rattus norvegicus GN=Grik5 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query: 70  LKFAIRCYGT 79
           L+ A+ C  T
Sbjct: 849 LRHAVSCRKT 858

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds kainate > quisqualate > glutamate >> AMPA.

Rattus norvegicus (taxid: 10116)

>sp|Q61626|GRIK5_MOUSE Glutamate receptor ionotropic, kainate 5 OS=Mus musculus GN=Grik5 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query: 70  LKFAIRCYGT 79
           L+ A+ C  T
Sbjct: 849 LRHAVSCRKT 858

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds kainate > quisqualate = glutamate >> AMPA.

Mus musculus (taxid: 10090)

>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus GN=Grik3 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LGI  +GG+F+VL AG  +S L ++ EF++ +RK A  E+ S       E+
Sbjct: 807 EEENKEASALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLRKTAEREQRSFCSTVADEI 866

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           +F++ C    + ++ K   P + K++++ N+  FN++
Sbjct: 867 RFSLTC---QRRLKHKPQPPMMVKTDAVINMHTFNDR 900

Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.

Rattus norvegicus (taxid: 10116)

>sp|Q91755|GRIK2_XENLA Glutamate receptor ionotropic, kainate 2 (Fragment) OS=Xenopus laevis GN=grik2 PE=2 SV=1

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LG+ N+GG+F+VL AG  +S   ++ EFL+  +K A  EK S   A + EL
Sbjct: 183 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 242

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           + +++C    + ++ K   P + K+  + N+  FN++
Sbjct: 243 RMSLKC---QRRLKHKPQPPVIVKTEEVINMHTFNDR 276

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.

Xenopus laevis (taxid: 8355)

>sp|Q16478|GRIK5_HUMAN Glutamate receptor ionotropic, kainate 5 OS=Homo sapiens GN=GRIK5 PE=2 SV=2

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           K+ED      LG++N+GG+F+VLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct: 790 KEEDHRAK-GLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query: 70  LKFAIRCYGT 79
           L+ A+ C  T
Sbjct: 849 LRHAVSCRKT 858

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds kainate > quisqualate > domoate > L-glutamate >> AMPA >> NMDA = 1S,3R-ACPD.

Homo sapiens (taxid: 9606)

>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2 PE=1 SV=4

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 11  DEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLEL 70
           +E+  +   LG+ N+GG+F+VL AG  +S   ++ EFL+  +K A  EK S   A + EL
Sbjct: 806 EEESKEASALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKSKKNAQLEKRSFCSAMVEEL 865

Query: 71  KFAIRCYGTSKPVRRKASTPSL-KSNSLANLDLFNNK 106
           + +++C    + ++ K   P + K+  + N+  FN++
Sbjct: 866 RMSLKC---QRRLKHKPQAPVIVKTEEVINMHTFNDR 899

Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. May be involved in the transmission of light information from the retina to the hypothalamus. Modulates cell surface expression of NETO2.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
328705128	897	PREDICTED: glutamate receptor, ionotropi	0.732	0.094	0.540	2e-21
328705130	943	PREDICTED: glutamate receptor, ionotropi	0.732	0.090	0.540	3e-21
328705126	897	PREDICTED: glutamate receptor, ionotropi	0.732	0.094	0.540	3e-21
307192444	933	Glutamate receptor, ionotropic kainate 2	0.655	0.081	0.551	1e-18
157129703	929	glutamate receptor, ionotropic kainate 1	0.560	0.069	0.676	9e-18
312383630	878	hypothetical protein AND_03133 [Anophele	0.663	0.087	0.607	1e-17
158289672	939	AGAP000803-PA [Anopheles gambiae str. PE	0.663	0.082	0.620	1e-17
170068371	968	glutamate receptor [Culex quinquefasciat	0.681	0.081	0.569	2e-17
307180037	920	Glutamate receptor, ionotropic kainate 2	0.724	0.091	0.529	3e-17
328792543	927	PREDICTED: glutamate receptor, ionotropi	0.663	0.083	0.532	4e-17

>gi|328705128|ref|XP_003242706.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 2 [Acyrthosiphon pisum]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           ++EDE+D  ELG   +GGVFVVL+ GC ++F+FS+LEFLWN+RKVA+EE+++P EA +LE
Sbjct: 810 EEEDESD--ELGFTKIGGVFVVLVLGCLIAFMFSILEFLWNIRKVAIEEEITPKEALILE 867

Query: 70  LKFAIRCYGTSKPVRRKASTPSLKSNS 96
            KFA++C G  KP+RR+    +  +NS
Sbjct: 868 WKFAMKCDGGVKPLRRRHHIDTGTNNS 894

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328705130|ref|XP_003242707.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 3 [Acyrthosiphon pisum]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           ++EDE+D  ELG   +GGVFVVL+ GC ++F+FS+LEFLWN+RKVA+EE+++P EA +LE
Sbjct: 856 EEEDESD--ELGFTKIGGVFVVLVLGCLIAFMFSILEFLWNIRKVAIEEEITPKEALILE 913

Query: 70  LKFAIRCYGTSKPVRRKASTPSLKSNS 96
            KFA++C G  KP+RR+    +  +NS
Sbjct: 914 WKFAMKCDGGVKPLRRRHHIDTGTNNS 940

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328705126|ref|XP_003242705.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 1 [Acyrthosiphon pisum]

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 68/87 (78%), Gaps = 2/87 (2%)

Query: 10  KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           ++EDE+D  ELG   +GGVFVVL+ GC ++F+FS+LEFLWN+RKVA+EE+++P EA +LE
Sbjct: 810 EEEDESD--ELGFTKIGGVFVVLVLGCLIAFMFSILEFLWNIRKVAIEEEITPKEALILE 867

Query: 70  LKFAIRCYGTSKPVRRKASTPSLKSNS 96
            KFA++C G  KP+RR+    +  +NS
Sbjct: 868 WKFAMKCDGGVKPLRRRHHIDTGTNNS 894

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192444|gb|EFN75660.1| Glutamate receptor, ionotropic kainate 2 [Harpegnathos saltator]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 59/78 (75%), Gaps = 2/78 (2%)

Query: 9   QKDEDE--TDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAF 66
           +KD+ E   +  ELG+ NVGGVF+VL+ GCG SF+ ++ EFLWN+RKVAV EK++P EA 
Sbjct: 802 KKDDTEKTVNTSELGLPNVGGVFLVLMCGCGASFIIAICEFLWNIRKVAVREKITPREAL 861

Query: 67  MLELKFAIRCYGTSKPVR 84
           M ELKFA+  +  +KPV+
Sbjct: 862 MAELKFAVNVWAVTKPVK 879

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157129703|ref|XP_001655464.1| glutamate receptor, ionotropic kainate 1, 2, 3 (glur5, glur6, glur7) [Aedes aegypti] gi|108882065|gb|EAT46290.1| AAEL002506-PA [Aedes aegypti]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/65 (67%), Positives = 52/65 (80%)

Query: 19  ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYG 78
           ELGIDNVGGVFVVL  GC  +F+  +LEFLWNVRKVAVEEK++P+EA   ELKFA+    
Sbjct: 813 ELGIDNVGGVFVVLAFGCFCAFILGILEFLWNVRKVAVEEKVTPWEALQAELKFALNLSI 872

Query: 79  TSKPV 83
           T+KPV
Sbjct: 873 TTKPV 877

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312383630|gb|EFR28642.1| hypothetical protein AND_03133 [Anopheles darlingi]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 19  ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYG 78
           ELGI NVGGVFVVL  GC  +F+  +LEFLWNVRKVAVEEK++P++A   ELKFA+    
Sbjct: 761 ELGIGNVGGVFVVLAIGCSCAFIIGILEFLWNVRKVAVEEKITPWDALKAELKFALNISV 820

Query: 79  TSKPVRR--KASTPSLKSN 95
           TSKPV      ST S KS+
Sbjct: 821 TSKPVHNTLSESTASGKSS 839

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158289672|ref|XP_311343.4| AGAP000803-PA [Anopheles gambiae str. PEST] gi|157018630|gb|EAA06913.4| AGAP000803-PA [Anopheles gambiae str. PEST]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 19  ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYG 78
           ELGI NVGGVFVVL  GC  +FL  +LEFLWNVRKVAVEEK++P++A   ELKFA+    
Sbjct: 822 ELGIGNVGGVFVVLALGCFCAFLIGILEFLWNVRKVAVEEKVTPWDALKAELKFALNIAV 881

Query: 79  TSKPVRR--KASTPSLKSN 95
           TSKPV      ST S KS+
Sbjct: 882 TSKPVHNTLSESTASGKSS 900

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170068371|ref|XP_001868841.1| glutamate receptor [Culex quinquefasciatus] gi|167864409|gb|EDS27792.1| glutamate receptor [Culex quinquefasciatus]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/79 (56%), Positives = 56/79 (70%)

Query: 19  ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYG 78
           ELGIDNVGGVFVVL  GC  +F+  +LEFLWNVRKVAV+EK++P+EA   ELKFA+    
Sbjct: 849 ELGIDNVGGVFVVLAFGCFCAFVIGILEFLWNVRKVAVDEKVTPWEALKAELKFALNLSI 908

Query: 79  TSKPVRRKASTPSLKSNSL 97
           T+KPV    S      +S+
Sbjct: 909 TTKPVHNTLSESESAKSSM 927

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180037|gb|EFN68113.1| Glutamate receptor, ionotropic kainate 2 [Camponotus floridanus]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)

Query: 11  DEDETDNP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
           D+ ET N  ELG+ NVGGVF+VL+ GCG S + +++EFLWNVR VAV EK++P EA   E
Sbjct: 792 DDTETANTGELGMANVGGVFLVLMLGCGASLILAIVEFLWNVRDVAVREKITPGEALKAE 851

Query: 70  LKFAIRCYGTSKPVRRKASTPSLKS 94
           L+FA+  + T KPV+   S+ S  S
Sbjct: 852 LRFAVNIWETKKPVKIAKSSSSATS 876

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792543|ref|XP_394264.3| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Apis mellifera]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 59/77 (76%)

Query: 13  DETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKF 72
           + T + ELG+ NVGGVF+VL+ GC  SF+ ++ EFLWNVRKVAV+EK++P+EA + ELKF
Sbjct: 803 EPTSSSELGLANVGGVFLVLLIGCCGSFIIAVFEFLWNVRKVAVKEKVTPWEALVAELKF 862

Query: 73  AIRCYGTSKPVRRKAST 89
           A+  +  +KPV+   S+
Sbjct: 863 AVNIWAETKPVKISKSS 879

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
FB|FBgn0026255	1002	clumsy "clumsy" [Drosophila me	0.758	0.087	0.488	4.9e-15
FB|FBgn0004620	907	GluRIIA "Glutamate receptor II	0.698	0.089	0.457	1.2e-12
UNIPROTKB|F1RGG3	558	LOC100737141 "Uncharacterized	0.836	0.173	0.343	3.7e-10
FB|FBgn0020429	913	GluRIIB "Glutamate receptor II	0.870	0.110	0.326	5.8e-10
UNIPROTKB|Q38PU0	891	GRIK5 "KA2" [Macaca fascicular	0.836	0.108	0.343	7.2e-10
UNIPROTKB|E1BKL6	972	GRIK5 "Uncharacterized protein	0.836	0.099	0.343	8.1e-10
MGI|MGI:95818	979	Grik5 "glutamate receptor, ion	0.836	0.099	0.343	8.2e-10
RGD|2735	979	Grik5 "glutamate receptor, ion	0.836	0.099	0.343	8.2e-10
UNIPROTKB|E2RFB5	980	GRIK5 "Uncharacterized protein	0.836	0.098	0.343	8.2e-10
UNIPROTKB|J9P242	980	GRIK5 "Uncharacterized protein	0.836	0.098	0.343	8.2e-10

FB|FBgn0026255 clumsy "clumsy" [Drosophila melanogaster (taxid:7227)]

 Score = 203 (76.5 bits), Expect = 4.9e-15, P = 4.9e-15
 Identities = 43/88 (48%), Positives = 57/88 (64%)

Query:     9 QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFML 68
             + DED  D PELG++NVGGVF+VL  G   + +    EFLWNV+ VA+EEK+S  EAF  
Sbjct:   797 KSDEDGGDTPELGLENVGGVFLVLGLGLLSAMVLGCTEFLWNVKSVAIEEKISLKEAFKS 856

Query:    69 ELKFAIRCYGTSKPVRRKASTPSLKSNS 96
             E  FA R + T+KPV   + + S  S+S
Sbjct:   857 EALFAARIWITTKPVHTSSESGSSNSSS 884

GO:0015277 "kainate selective glutamate receptor activity" evidence=ISS

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0060025 "regulation of synaptic activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

FB|FBgn0004620 GluRIIA "Glutamate receptor IIA" [Drosophila melanogaster (taxid:7227)]

 Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 38/83 (45%), Positives = 55/83 (66%)

Query:    14 ETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFA 73
             E D  EL I  +GGVF+VL  G  +  +  + EFLWNV+ VAVEE+++P++AF  EL FA
Sbjct:   807 EVDGDELSIIELGGVFLVLAGGVLIGVILGIFEFLWNVQNVAVEERVTPWQAFKAELIFA 866

Query:    74 IRCYGTSKPVRRKASTPSLKSNS 96
             ++ +   KP+R   S+ S KS+S
Sbjct:   867 LKFWVRKKPMR--ISSSSDKSSS 887

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0008066 "glutamate receptor activity" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0015277 "kainate selective glutamate receptor activity" evidence=ISS

GO:0007268 "synaptic transmission" evidence=IDA;IMP

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:1900075 "positive regulation of neuromuscular synaptic transmission" evidence=IMP

GO:0008328 "ionotropic glutamate receptor complex" evidence=IPI

GO:0004970 "ionotropic glutamate receptor activity" evidence=IMP

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:0051968 "positive regulation of synaptic transmission, glutamatergic" evidence=IMP

GO:0014069 "postsynaptic density" evidence=IDA

GO:0046928 "regulation of neurotransmitter secretion" evidence=IGI

GO:0060025 "regulation of synaptic activity" evidence=IMP;IDA

UNIPROTKB|F1RGG3 LOC100737141 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 154 (59.3 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   368 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 426

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   427 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 468

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

FB|FBgn0020429 GluRIIB "Glutamate receptor IIB" [Drosophila melanogaster (taxid:7227)]

 Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
 Identities = 33/101 (32%), Positives = 55/101 (54%)

Query:    16 DNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIR 75
             D+ +  +D+VGG+FVVLI G  V  +  + EFLW+V++++V+EK+ P  A   E  F IR
Sbjct:   809 DDGQFDMDSVGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKIPPMLALKAEFYFVIR 868

Query:    76 CYGTSKPVRRKASTPSLKSNSLANLDLFNNKMNMINYNSTR 116
              + T KP+     +    S   ++L+   +  +      TR
Sbjct:   869 FWLTRKPLHTYRQSRDSTSTGYSSLEQITSASSAKKKKKTR 909

GO:0008066 "glutamate receptor activity" evidence=IDA

GO:0031594 "neuromuscular junction" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS

GO:0015277 "kainate selective glutamate receptor activity" evidence=ISS

GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0051968 "positive regulation of synaptic transmission, glutamatergic" evidence=IMP

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:1900075 "positive regulation of neuromuscular synaptic transmission" evidence=IMP

GO:0008328 "ionotropic glutamate receptor complex" evidence=IPI

GO:0004970 "ionotropic glutamate receptor activity" evidence=IMP

GO:0060025 "regulation of synaptic activity" evidence=ISS

UNIPROTKB|Q38PU0 GRIK5 "KA2" [Macaca fascicularis (taxid:9541)]

 Score = 154 (59.3 bits), Expect = 7.2e-10, P = 7.2e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   790 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   849 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 890

GO:0005622 "intracellular" evidence=IDA

GO:0030424 "axon" evidence=IDA

GO:0043197 "dendritic spine" evidence=IDA

UNIPROTKB|E1BKL6 GRIK5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 154 (59.3 bits), Expect = 8.1e-10, P = 8.1e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   791 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 849

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   850 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 891

GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0042734 "presynaptic membrane" evidence=IEA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA

GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA

GO:0031630 "regulation of synaptic vesicle fusion to presynaptic membrane" evidence=IEA

GO:0015277 "kainate selective glutamate receptor activity" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

MGI|MGI:95818 Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma 2)" [Mus musculus (taxid:10090)]

 Score = 154 (59.3 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   790 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   849 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 890

GO:0004872 "receptor activity" evidence=IEA

GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IEA

GO:0006621 "protein retention in ER lumen" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0007165 "signal transduction" evidence=ISO

GO:0007268 "synaptic transmission" evidence=ISO

GO:0008066 "glutamate receptor activity" evidence=ISO

GO:0008328 "ionotropic glutamate receptor complex" evidence=ISO

GO:0014069 "postsynaptic density" evidence=ISO

GO:0015277 "kainate selective glutamate receptor activity" evidence=ISO;IGI

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030424 "axon" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0031630 "regulation of synaptic vesicle fusion to presynaptic membrane" evidence=IMP

GO:0032983 "kainate selective glutamate receptor complex" evidence=IPI

GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO;IGI

GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP

GO:0042391 "regulation of membrane potential" evidence=IGI

GO:0042734 "presynaptic membrane" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043113 "receptor clustering" evidence=ISO

GO:0043195 "terminal bouton" evidence=ISO

GO:0043204 "perikaryon" evidence=ISO

GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISO

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=IDA

GO:0051649 "establishment of localization in cell" evidence=ISO

GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IMP

RGD|2735 Grik5 "glutamate receptor, ionotropic, kainate 5" [Rattus norvegicus (taxid:10116)]

 Score = 154 (59.3 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   790 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   849 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 890

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006621 "protein retention in ER lumen" evidence=IMP

GO:0007268 "synaptic transmission" evidence=IDA

GO:0008066 "glutamate receptor activity" evidence=IDA

GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA

GO:0014069 "postsynaptic density" evidence=IDA

GO:0015277 "kainate selective glutamate receptor activity" evidence=ISO;IDA

GO:0016020 "membrane" evidence=ISO

GO:0017124 "SH3 domain binding" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IPI

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0031630 "regulation of synaptic vesicle fusion to presynaptic membrane" evidence=IEA;ISO

GO:0032983 "kainate selective glutamate receptor complex" evidence=IEA;ISO

GO:0035235 "ionotropic glutamate receptor signaling pathway" evidence=ISO

GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO

GO:0042391 "regulation of membrane potential" evidence=ISO

GO:0042734 "presynaptic membrane" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=IPI

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043113 "receptor clustering" evidence=IDA

GO:0043195 "terminal bouton" evidence=IDA

GO:0043204 "perikaryon" evidence=IDA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IMP

GO:0045211 "postsynaptic membrane" evidence=IEA;ISO

GO:0051649 "establishment of localization in cell" evidence=IMP

GO:0060079 "regulation of excitatory postsynaptic membrane potential" evidence=IEA;ISO

GO:0071333 "cellular response to glucose stimulus" evidence=IEP

UNIPROTKB|E2RFB5 GRIK5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 154 (59.3 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   790 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   849 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 890

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA

UNIPROTKB|J9P242 GRIK5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 154 (59.3 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 35/102 (34%), Positives = 60/102 (58%)

Query:    10 KDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLE 69
             K+ED      LG++N+GG+FVVLI G  ++   +++EF+W+ R+ A  E++S  +  + E
Sbjct:   790 KEEDHRAKG-LGMENIGGIFVVLICGLIIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQE 848

Query:    70 LKFAIRCYGTSKPVRRKA-STPS---LKSNSLANLDLFNNKM 107
             L+ A+ C  TS+  RR+    PS   L   ++  + L N K+
Sbjct:   849 LRHAVSCRKTSRSRRRRRPGGPSRALLSLRAVREMRLSNGKL 890

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005234 "extracellular-glutamate-gated ion channel activity" evidence=IEA

GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG1054|consensus	897		99.23
KOG1052|consensus	656		98.2
KOG4440|consensus	993		97.15
KOG1053|consensus	1258		96.6
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	81.57

>KOG1054|consensus

Probab=99.23  E-value=8.5e-12  Score=109.40  Aligned_cols=57  Identities=32%  Similarity=0.506  Sum_probs=50.7

Q ss_pred             cccCCCCCCCCC---CCC-CcccccccceeehhhhHHHHHHHHHHHHHHHHhhhhhcccCC
Q psy16208          4 VMDTLQKDEDET---DNP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKL   60 (116)
Q Consensus         4 ~~~~g~C~~~~~---~~~-~L~l~nvgGVF~VL~~Gl~la~vvai~Efl~~~rk~a~~ekv   60 (116)
                      |||+|+|.....   +++ +|+++||+||||+|++|+++|+++|++||||++|.++++-+.
T Consensus       790 WYDkGeC~sg~~ds~~ktsaLsLSnVAGvFYIL~gGl~laMlvALiEF~yksr~Eakr~k~  850 (897)
T KOG1054|consen  790 WYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKR  850 (897)
T ss_pred             cccccccCCCCCCCCcchhhcchhhccceeeeehhhHHHHHHHHHHHHHHHhhHHHHhhhh
Confidence            999999986543   344 899999999999999999999999999999999999888773

>KOG1052|consensus

Probab=98.20  E-value=9.4e-07  Score=76.59  Aligned_cols=69  Identities=22%  Similarity=0.366  Sum_probs=54.9

Q ss_pred             CCCCCCCCCCC-CcccccccceeehhhhHHHHHHHHHHHHHHHHhhhhhcccCCChHHHHHHhhceeeeecCc
Q psy16208          8 LQKDEDETDNP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELKFAIRCYGT   79 (116)
Q Consensus         8 g~C~~~~~~~~-~L~l~nvgGVF~VL~~Gl~la~vvai~Efl~~~rk~a~~ekvs~~~al~~Elrf~l~c~~~   79 (116)
                      ..|...+  ++ .|++++++|+|+|+++|+++|+++.++|++|+.++...+++.....+...|.. ...|+..
T Consensus       578 ~~~~~~~--~~~~l~~~~~~g~F~i~~~g~~lal~vfi~E~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  647 (656)
T KOG1052|consen  578 PKCSQTE--KTKALDLESFWGLFLILLVGYLLALLVFILELLYSRRRTLLRERLERVSTSRTESV-TIPDNRS  647 (656)
T ss_pred             CCCCCcc--cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccccccccccc-ccccccc
Confidence            4565544  44 79999999999999999999999999999999999887777776766666666 5555443

>KOG4440|consensus

Probab=97.15  E-value=5.3e-05  Score=67.78  Aligned_cols=53  Identities=21%  Similarity=0.424  Sum_probs=43.4

Q ss_pred             CcccccccceeehhhhHHHHHHHHHHHHHHHHhhhhhcccCCChHHHHHHhhc
Q psy16208         19 ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLSPYEAFMLELK   71 (116)
Q Consensus        19 ~L~l~nvgGVF~VL~~Gl~la~vvai~Efl~~~rk~a~~ekvs~~~al~~Elr   71 (116)
                      .||++|++|||++..+|++.++++.++|..|+.++.++..+.-.--+-.+.+|
T Consensus       821 tLgl~NMagvFiLV~~Gia~GifLifiEv~Ykrh~~~k~kr~~ia~~a~~kWr  873 (993)
T KOG4440|consen  821 TLGLENMAGVFILVAGGIAAGIFLIFIEVAYKRHKDAKRKRMQIAFAAVNKWR  873 (993)
T ss_pred             cccccccccEEEEEecchhheeeEEEEeehhhhhhhhhhHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999877766543333333333

>KOG1053|consensus

Probab=96.60  E-value=0.0011  Score=61.28  Aligned_cols=47  Identities=32%  Similarity=0.580  Sum_probs=36.9

Q ss_pred             CCCCCCCCC-CC-CcccccccceeehhhhHHHHHHHHHHHHHH--HHhhhh
Q psy16208          8 LQKDEDETD-NP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFL--WNVRKV   54 (116)
Q Consensus         8 g~C~~~~~~-~~-~L~l~nvgGVF~VL~~Gl~la~vvai~Efl--~~~rk~   54 (116)
                      |.|-.+..+ .+ .|+++|++||||.|++|+++++++.++|=|  |+.|+.
T Consensus       807 gic~n~k~evmSsqLdIdnmaGvFymL~~amgLSllvfi~EHlvYw~Lr~~  857 (1258)
T KOG1053|consen  807 GICHNSKNEVMSSQLDIDNMAGVFYMLAVAMGLSLLVFIWEHLVYWKLRHC  857 (1258)
T ss_pred             cccccchhhhhhcccChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            456544332 34 899999999999999999999999999965  565554

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=81.57  E-value=1.8  Score=30.72  Aligned_cols=27  Identities=30%  Similarity=0.258  Sum_probs=18.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHhhhhhcc
Q psy16208         31 VLIAGCGVSFLFSLLEFLWNVRKVAVE   57 (116)
Q Consensus        31 VL~~Gl~la~vvai~Efl~~~rk~a~~   57 (116)
                      ||++++++.+++.|+=+++..+++.++
T Consensus         3 ~l~~iii~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    3 VLFAIIIVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            456666777777777777777776565

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
3kg2_A	823	Glutamate receptor 2; ION channel, membrane protei	6e-11

>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus} Length = 823

 Score = 57.1 bits (137), Expect = 6e-11
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 9   QKDEDETDNPELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEKLS 61
           +    +     L + NV GVF +L+ G G++ L +L+EF +  R  A   K  
Sbjct: 767 KDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMKGL 819

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
3kg2_A	823	Glutamate receptor 2; ION channel, membrane protei	98.22

>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}

Probab=98.22  E-value=3.7e-07  Score=77.56  Aligned_cols=55  Identities=31%  Similarity=0.579  Sum_probs=39.9

Q ss_pred             ccCCCCCCCCC---CCC-CcccccccceeehhhhHHHHHHHHHHHHHHHHhhhhhcccC
Q psy16208          5 MDTLQKDEDET---DNP-ELGIDNVGGVFVVLIAGCGVSFLFSLLEFLWNVRKVAVEEK   59 (116)
Q Consensus         5 ~~~g~C~~~~~---~~~-~L~l~nvgGVF~VL~~Gl~la~vvai~Efl~~~rk~a~~ek   59 (116)
                      .+.+.|...+.   .+. +|+++++.|+|++|++|+++|+++.++|++|+.++.+++.+
T Consensus       759 ~~~~~c~~~~~~~~~~~~~L~l~~l~g~f~il~~g~~la~~vf~~E~~~~~~~~~~~~~  817 (823)
T 3kg2_A          759 YDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMK  817 (823)
T ss_dssp             TTSCSCSSTTTSTTTCCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             cCCCCCCCCCccccccCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHcchhhhhcc
Confidence            46788986543   244 89999999999999999999999999999998887766544

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00