Psyllid ID: psy1625

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGNEEVSERKTEIEQDENSVQED
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgssagagsgefHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQklknkpkkvktegkeeeeeseddsksedensdkdednkegneeVSERKTeieqdensvqed
Flexible Loop (DISEMBL)
mgssagagsgefhvYRHLRRKEYARQKHIQeksekelldeeFQQKIqekrqtfedktakkrakrlkrkqklknkpkkvktegkeeeeeseddsksedensdkdednkegneevserkteieqdensvqed
Low Complexity Region (SEG)
MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDktakkrakrlkrkqklknkpkkvkTegkeeeeeseddsksedensdkdednkegneeVSERKTEIEQDENSVQED
Disordered region (IsUnstruct)
**********************************************************************************************************************************
Disordered Region (DISOPRED)
******A*SGEFHVYRHLRRKEYARQ********************************************************************************************************
Disordered Region (DISEMBL)
*********GEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQ*******************************************************************************
Disordered Region (DISPRO)
**********EFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQK************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGxxxxxxxxxxxxxxxxxxxxx
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q28IN9	173	PRKR-interacting protein	yes	N/A	0.469	0.352	0.639	3e-16
Q568A0	182	PRKR-interacting protein	yes	N/A	0.446	0.318	0.637	2e-15
Q6GNG8	173	PRKR-interacting protein	N/A	N/A	0.469	0.352	0.606	3e-15
Q5ZKU0	189	PRKR-interacting protein	yes	N/A	0.446	0.306	0.620	5e-15
Q5R5J3	184	PRKR-interacting protein	yes	N/A	0.446	0.315	0.586	2e-14
Q9H875	184	PRKR-interacting protein	yes	N/A	0.446	0.315	0.586	2e-14
Q9CWV6	186	PRKR-interacting protein	yes	N/A	0.446	0.311	0.586	2e-14
Q2KIT1	186	PRKR-interacting protein	yes	N/A	0.446	0.311	0.568	7e-14
P41880	189	Uncharacterized protein F	yes	N/A	0.553	0.380	0.5	7e-10

>sp|Q28IN9|PKRI1_XENTR PRKR-interacting protein 1 homolog OS=Xenopus tropicalis GN=prkrip1 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 50/61 (81%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           MGSSAGAGSGEFHVYRHLRR+EY RQ+ +   SEK  LD++FQ+K+ E ++  E+KTAK+
Sbjct: 67  MGSSAGAGSGEFHVYRHLRRREYQRQEFLDRVSEKHNLDDDFQRKLMENKKLEEEKTAKR 126

Query: 61  R 61
           R
Sbjct: 127 R 127

Binds double-stranded RNA.
Xenopus tropicalis (taxid: 8364)

>sp|Q568A0|PKRI1_DANRE PRKR-interacting protein 1 homolog OS=Danio rerio GN=prkrip1 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/58 (63%), Positives = 48/58 (82%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ  ++  SEK+ LDEE+++K+ E ++  ED+TA
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRREYQRQDFLERLSEKQKLDEEYKEKLIENQKAAEDRTA 125

Binds double-stranded RNA.

Danio rerio (taxid: 7955)

>sp|Q6GNG8|PKRI1_XENLA PRKR-interacting protein 1 homolog OS=Xenopus laevis GN=prkrip1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 50/61 (81%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           MGSSAGAGSGEFHVYRHLRR+EY RQ+ +   SEK+ LDEE+++K+ + +   E++TAK+
Sbjct: 67  MGSSAGAGSGEFHVYRHLRRREYQRQEFLDGMSEKQRLDEEYKKKLIQNKMLEEERTAKR 126

Query: 61  R 61
           R
Sbjct: 127 R 127

Binds double-stranded RNA.

Xenopus laevis (taxid: 8355)

>sp|Q5ZKU0|PKRI1_CHICK PRKR-interacting protein 1 homolog OS=Gallus gallus GN=PRKRIP1 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 46/58 (79%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ  +   +EK+ LDEEFQ+K++  +   E++TA
Sbjct: 66  MGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEEQTA 123

Binds double-stranded RNA.

Gallus gallus (taxid: 9031)

>sp|Q5R5J3|PKRI1_PONAB PRKR-interacting protein 1 OS=Pongo abelii GN=PRKRIP1 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 47/58 (81%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E++TA
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125

Binds double-stranded RNA. Inhibits EIF2AK2 kinase activity.

Pongo abelii (taxid: 9601)

>sp|Q9H875|PKRI1_HUMAN PRKR-interacting protein 1 OS=Homo sapiens GN=PRKRIP1 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 47/58 (81%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E++TA
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125

Binds double-stranded RNA. Inhibits EIF2AK2 kinase activity.

Homo sapiens (taxid: 9606)

>sp|Q9CWV6|PKRI1_MOUSE PRKR-interacting protein 1 OS=Mus musculus GN=Prkrip1 PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 47/58 (81%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E++TA
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEEQTA 125

Binds double-stranded RNA. Inhibits EIF2AK2 kinase activity.

Mus musculus (taxid: 10090)

>sp|Q2KIT1|PKRI1_BOVIN PRKR-interacting protein 1 OS=Bos taurus GN=PRKRIP1 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 46/58 (79%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTA 58
           MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ L+ EFQ++++  +   E++TA
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIAAEEQTA 125

Binds double-stranded RNA. Inhibits EIF2AK2 kinase activity.

Bos taurus (taxid: 9913)

>sp|P41880|YPT2_CAEEL Uncharacterized protein F37A4.2 OS=Caenorhabditis elegans GN=F37A4.2 PE=4 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 51/72 (70%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           +GSSA AGS EFH+YR+ RRKE  R  +I   ++KE LD+ ++ K+++  +  E KTAKK
Sbjct: 59  VGSSAAAGSAEFHIYRNNRRKEQNRLDYIDAVAKKEELDDAYRHKVEKLEKEEESKTAKK 118

Query: 61  RAKRLKRKQKLK 72
           RAKRL++K   K
Sbjct: 119 RAKRLRQKAAAK 130


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.296    0.119    0.298 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,979,628
Number of Sequences: 539616
Number of extensions: 2415262
Number of successful extensions: 104219
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4226
Number of HSP's successfully gapped in prelim test: 3256
Number of HSP's that attempted gapping in prelim test: 29980
Number of HSP's gapped (non-prelim): 45133
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
S2: 55 (25.8 bits)

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
157110223	256	hypothetical protein AaeL_AAEL000785 [Ae	0.438	0.222	0.789	2e-19
240849497	166	PRKR-interacting protein 1-like [Acyrtho	0.753	0.590	0.646	2e-19
332017134	224	PRKR-interacting protein 1-like protein	0.438	0.254	0.754	3e-18
383860146	262	PREDICTED: uncharacterized protein LOC10	0.438	0.217	0.754	4e-18
242003626	174	axoneme-associated protein mst101, putat	0.807	0.603	0.641	5e-18
307175614	224	PRKR-interacting protein 1-like protein	0.438	0.254	0.719	2e-17
312381122	228	hypothetical protein AND_06654 [Anophele	0.438	0.25	0.736	2e-17
357623094	197	hypothetical protein KGM_18005 [Danaus p	0.438	0.289	0.771	2e-17
350400397	186	PREDICTED: PRKR-interacting protein 1 ho	0.438	0.306	0.754	3e-17
194882615	260	GG22295 [Drosophila erecta] gi|190658593	0.807	0.403	0.543	3e-17

>gi|157110223|ref|XP_001651008.1| hypothetical protein AaeL_AAEL000785 [Aedes aegypti] gi|108883959|gb|EAT48184.1| AAEL000785-PA [Aedes aegypti]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/57 (78%), Positives = 51/57 (89%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKS  E LD+EFQQK+++ +Q  ED+T
Sbjct: 66  MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSRSEQLDDEFQQKLEQNKQDAEDRT 122

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|240849497|ref|NP_001155369.1| PRKR-interacting protein 1-like [Acyrthosiphon pisum] gi|239791369|dbj|BAH72159.1| ACYPI000164 [Acyrthosiphon pisum]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 79/99 (79%), Gaps = 1/99 (1%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           MGSSAGAGSGEFHVYRHLRRKEYARQKHIQ K+EKELL+E ++QKI E +Q  E +TAKK
Sbjct: 63  MGSSAGAGSGEFHVYRHLRRKEYARQKHIQVKAEKELLEEAYRQKILENKQMAEGRTAKK 122

Query: 61  RAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDEN 99
           RAKRLKRK+ L+ K  K+  +    +  SE+DS S+D++
Sbjct: 123 RAKRLKRKKVLREK-SKMSKKNNTADSVSENDSTSDDDD 160

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017134|gb|EGI57933.1| PRKR-interacting protein 1-like protein [Acromyrmex echinatior]

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 50/57 (87%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEK+ KELLD+E+ QK++E R+  E+ T
Sbjct: 59  MGSSAGAGSGEFHVYRHLRRKEYARQKFIQEKAYKELLDDEYHQKLEENRRLAEETT 115

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860146|ref|XP_003705552.1| PREDICTED: uncharacterized protein LOC100876439 [Megachile rotundata]

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 50/57 (87%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEK +KELLDEE+ +K++E R+  E+ T
Sbjct: 59  MGSSAGAGSGEFHVYRHLRRKEYARQKFIQEKGQKELLDEEYHRKLEENRRIAEEIT 115

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003626|ref|XP_002422803.1| axoneme-associated protein mst101, putative [Pediculus humanus corporis] gi|212505661|gb|EEB10065.1| axoneme-associated protein mst101, putative [Pediculus humanus corporis]

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 91/106 (85%), Gaps = 1/106 (0%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           MGSSAGAGSGEFHVYRHLRRKEYARQK+IQ+KSEKE+LDE +++K++E  +  E++TAKK
Sbjct: 68  MGSSAGAGSGEFHVYRHLRRKEYARQKYIQQKSEKEMLDEAYKKKLEENAKISEERTAKK 127

Query: 61  RAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDN 106
           RAKRLK+K+K+KN+ KK K E +  +++SE+D   ED +SDKDE++
Sbjct: 128 RAKRLKKKEKMKNRKKKPKIENETLKQKSENDDTDED-SSDKDEND 172

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175614|gb|EFN65523.1| PRKR-interacting protein 1-like protein [Camponotus floridanus]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 50/57 (87%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEK+ KELLD+E+ QK+++ ++  E+ T
Sbjct: 58  MGSSAGAGSGEFHVYRHLRRKEYARQKFIQEKAHKELLDDEYHQKLEDNKRLAEEAT 114

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312381122|gb|EFR26941.1| hypothetical protein AND_06654 [Anopheles darlingi]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 49/57 (85%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEKS  E LD++FQQK++  R+  E++T
Sbjct: 66  MGSSAGAGSGEFHVYRHLRRKEYARQKQIQEKSRSEQLDDDFQQKLENNRKAAEERT 122

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623094|gb|EHJ74384.1| hypothetical protein KGM_18005 [Danaus plexippus]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/57 (77%), Positives = 52/57 (91%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEKSEKE LDEE+Q+K++E ++  ++KT
Sbjct: 90  MGSSAGAGSGEFHVYRHLRRKEYARQKFIQEKSEKEKLDEEYQRKLEENKKIADEKT 146

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400397|ref|XP_003485821.1| PREDICTED: PRKR-interacting protein 1 homolog [Bombus impatiens]

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKT 57
           MGSSAGAGSGEFHVYRHLRRKEYARQK IQEK  KELLDEE+ +KI+E ++  E+ T
Sbjct: 59  MGSSAGAGSGEFHVYRHLRRKEYARQKFIQEKGHKELLDEEYHRKIEENKRIAEEIT 115

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194882615|ref|XP_001975406.1| GG22295 [Drosophila erecta] gi|190658593|gb|EDV55806.1| GG22295 [Drosophila erecta]

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 83/114 (72%), Gaps = 9/114 (7%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
           MGSSAGAGSGEFHVYRHLRRKEYARQK+IQ +S +E+ DE +QQK+ + R+  E+KTAKK
Sbjct: 85  MGSSAGAGSGEFHVYRHLRRKEYARQKNIQNQSAREVADEAYQQKLDDNRRAAEEKTAKK 144

Query: 61  RAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGNEEVS 114
           RAKR+K+KQ+ K KP+        E+++   +  SE  N+D +E+  + N E S
Sbjct: 145 RAKRMKKKQRAK-KPR--------EDKKPLANEASEASNTDSEEEPTKENAETS 189

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
ZFIN|ZDB-GENE-111011-2	182	prkrip1 "PRKR interacting prot	0.423	0.302	0.636	6.9e-15
UNIPROTKB|Q5ZKU0	189	PRKRIP1 "PRKR-interacting prot	0.423	0.291	0.618	2.3e-14
UNIPROTKB|Q9H875	184	PRKRIP1 "PRKR-interacting prot	0.423	0.298	0.581	1.3e-13
MGI|MGI:1914051	186	Prkrip1 "Prkr interacting prot	0.423	0.295	0.581	1.3e-13
RGD|1595708	186	Prkrip1 "Prkr interacting prot	0.423	0.295	0.581	1.3e-13
UNIPROTKB|F1MC68	186	PRKRIP1 "PRKR-interacting prot	0.423	0.295	0.581	1.6e-13
UNIPROTKB|F1RKF6	189	PRKRIP1 "Uncharacterized prote	0.423	0.291	0.581	1.6e-13
UNIPROTKB|Q2KIT1	186	PRKRIP1 "PRKR-interacting prot	0.423	0.295	0.563	4.4e-13
ASPGD|ASPL0000035011	208	AN3135 [Emericella nidulans (t	0.384	0.240	0.54	4.7e-09
TAIR|locus:2049088	194	AT2G15270 "AT2G15270" [Arabido	0.415	0.278	0.425	3.7e-06

ZFIN|ZDB-GENE-111011-2 prkrip1 "PRKR interacting protein 1 (IL11 inducible)" [Danio rerio (taxid:7955)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 35/55 (63%), Positives = 45/55 (81%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ  ++  SEK+ LDEE+++K+ E ++  ED
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDFLERLSEKQKLDEEYKEKLIENQKAAED 122

GO:0005634 "nucleus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|Q5ZKU0 PRKRIP1 "PRKR-interacting protein 1 homolog" [Gallus gallus (taxid:9031)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 34/55 (61%), Positives = 43/55 (78%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ  +   +EK+ LDEEFQ+K++  +   E+
Sbjct:    66 MGSSAGAGSGEFHVYRHLRRREYQRQDFMDAMAEKQRLDEEFQKKLERNKMIAEE 120

GO:0005730 "nucleolus" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

UNIPROTKB|Q9H875 PRKRIP1 "PRKR-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 32/55 (58%), Positives = 44/55 (80%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEE 122

GO:0003725 "double-stranded RNA binding" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

MGI|MGI:1914051 Prkrip1 "Prkr interacting protein 1 (IL11 inducible)" [Mus musculus (taxid:10090)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 32/55 (58%), Positives = 44/55 (80%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEE 122

GO:0003725 "double-stranded RNA binding" evidence=IDA

GO:0004860 "protein kinase inhibitor activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0006469 "negative regulation of protein kinase activity" evidence=IDA

GO:0019901 "protein kinase binding" evidence=IDA

GO:0042326 "negative regulation of phosphorylation" evidence=IDA

RGD|1595708 Prkrip1 "Prkr interacting protein 1 (IL11 inducible)" [Rattus norvegicus (taxid:10116)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 32/55 (58%), Positives = 44/55 (80%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ+++++ +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLEKNKIAAEE 122

GO:0003725 "double-stranded RNA binding" evidence=IEA;ISO

GO:0004860 "protein kinase inhibitor activity" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO

GO:0019901 "protein kinase binding" evidence=IEA;ISO

GO:0042326 "negative regulation of phosphorylation" evidence=ISO

UNIPROTKB|F1MC68 PRKRIP1 "PRKR-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 32/55 (58%), Positives = 43/55 (78%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ++++  +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLERNKIAAEE 122

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

UNIPROTKB|F1RKF6 PRKRIP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 32/55 (58%), Positives = 43/55 (78%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ LD EFQ++++  +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLDAEFQKRLERNKIAAEE 122

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0004860 "protein kinase inhibitor activity" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

UNIPROTKB|Q2KIT1 PRKRIP1 "PRKR-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 31/55 (56%), Positives = 43/55 (78%)

Query:     1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             MGSSAGAGSGEFHVYRHLRR+EY RQ ++   +EK+ L+ EFQ++++  +   E+
Sbjct:    68 MGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEKQKLEAEFQKRLERNKIAAEE 122

GO:0005730 "nucleolus" evidence=IEA

ASPGD|ASPL0000035011 AN3135 [Emericella nidulans (taxid:162425)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/50 (54%), Positives = 38/50 (76%)

Query:     2 GSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQ 51
             GSSAGAGSGEFHVY+  RR+EY R + +QE+ ++E    E+Q+K +E R+
Sbjct:    73 GSSAGAGSGEFHVYKASRRREYERLRLMQEEVDREKEGAEWQRKQEEVRR 122

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2049088 AT2G15270 "AT2G15270" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query:     2 GSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFED 55
             GSSAG+GSG+FH YR +RR+E  R   +     K L   EF  + +EK++  E+
Sbjct:    72 GSSAGSGSGDFHQYRQMRRREQDRLTRMDIDYNKRLKMAEFTIRREEKQKAAEE 125


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.124   0.321    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130        74   0.00091  102 3  10 23  0.44    29
                                                     29  0.46    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  469 (50 KB)
  Total size of DFA:  107 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.88u 0.10s 17.98t   Elapsed:  00:00:13
  Total cpu time:  17.88u 0.10s 17.98t   Elapsed:  00:00:13
  Start:  Thu Aug 15 11:08:56 2013   End:  Thu Aug 15 11:09:09 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q568A0	PKRI1_DANRE	No assigned EC number	0.6379	0.4461	0.3186	yes	N/A
Q2KIT1	PKRI1_BOVIN	No assigned EC number	0.5689	0.4461	0.3118	yes	N/A
Q5R5J3	PKRI1_PONAB	No assigned EC number	0.5862	0.4461	0.3152	yes	N/A
Q28IN9	PKRI1_XENTR	No assigned EC number	0.6393	0.4692	0.3526	yes	N/A
Q5ZKU0	PKRI1_CHICK	No assigned EC number	0.6206	0.4461	0.3068	yes	N/A
Q9H875	PKRI1_HUMAN	No assigned EC number	0.5862	0.4461	0.3152	yes	N/A
Q9CWV6	PKRI1_MOUSE	No assigned EC number	0.5862	0.4461	0.3118	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	130
pfam06658	142	pfam06658, DUF1168, Protein of unknown function (D	5e-18

>gnl|CDD|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)

 Score = 74.3 bits (183), Expect = 5e-18
 Identities = 65/116 (56%), Positives = 82/116 (70%)

Query: 1   MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKK 60
            GSSAGAGSGEFHVYR LRR+EY R + + EK +KE  DEEFQQK +EK++  E+KTAKK
Sbjct: 27  QGSSAGAGSGEFHVYRALRRREYERLELMDEKWKKETEDEEFQQKREEKKRKDEEKTAKK 86

Query: 61  RAKRLKRKQKLKNKPKKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGNEEVSER 116
           RAKR K+KQK K K K  K   KEE+E S+   +S DE  + +ED +E   E+ E+
Sbjct: 87  RAKRQKKKQKKKKKKKAKKGNKKEEKEGSKSSEESSDEEEEGEEDKQEEPVEIMEK 142

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PF06658	142	DUF1168: Protein of unknown function (DUF1168); In	100.0
KOG4055|consensus	213		100.0

>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function

Probab=100.00  E-value=6.5e-39  Score=245.12  Aligned_cols=72  Identities=63%  Similarity=0.876  Sum_probs=71.3

Q ss_pred             CCCCCCCCCchhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1625           1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLK   72 (130)
Q Consensus         1 mGSSAGAGSGEFHvYR~~RRrE~eRl~~Me~~~~ke~e~~eF~~kree~~~~~eeKTaKkR~KR~KkK~kk~   72 (130)
                      ||||||||||||||||++|||||+||.+|+..|+++.++.+|+.++++++++++++|+|||+||+|+|++++
T Consensus        27 ~GSSAGAGSGeFHvYR~~RRrE~~Rl~~me~~~~~e~~~~eF~~kree~~~~~eekTaKkR~KR~KkK~kk~   98 (142)
T PF06658_consen   27 QGSSAGAGSGEFHVYRASRRREYERLEYMEEEAKKEKEDEEFQRKREERKKEAEEKTAKKRAKRQKKKQKKK   98 (142)
T ss_pred             cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999999999999999999999887

>KOG4055|consensus

Probab=100.00  E-value=6.1e-34  Score=228.93  Aligned_cols=84  Identities=57%  Similarity=0.817  Sum_probs=75.2

Q ss_pred             CCCCCCCCCchhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCccc
Q psy1625           1 MGSSAGAGSGEFHVYRHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLK--NKPKKV   78 (130)
Q Consensus         1 mGSSAGAGSGEFHvYR~~RRrE~eRl~~Me~~~~ke~e~~eF~~kree~~~~~eeKTaKkR~KR~KkK~kk~--~~~Kk~   78 (130)
                      ||||||||||+||||||+|||||.||.+|+.++.++.++++|+.+++.+..+++++|+|+|+||+|+|++++  +++|+.
T Consensus        71 ~GSSAgaGSgeFHvYR~lRRrEq~Rl~~md~~a~Ke~~daefq~r~ek~~kaaEeKTaKKRaKRqk~Kq~akkkklakk~  150 (213)
T KOG4055|consen   71 MGSSAGAGSGEFHVYRHLRRREQDRLDYMDADANKELLDAEFQIRLEKNQKAAEEKTAKKRAKRQKKKQKAKKKKLAKKT  150 (213)
T ss_pred             ccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence            899999999999999999999999999999999999999999999999999999999999999999999554  244444


Q ss_pred             cccccc
Q psy1625          79 KTEGKE   84 (130)
Q Consensus        79 K~~~~~   84 (130)
                      ..+..+
T Consensus       151 ~ee~~k  156 (213)
T KOG4055|consen  151 TEEEVK  156 (213)
T ss_pred             chhhhc
Confidence            444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	130
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 18/114 (15%), Positives = 45/114 (39%), Gaps = 3/114 (2%)

Query: 16   RHLRRKEYARQKHIQEKSEKELLDEEFQQKIQEKRQTFEDKTAKKRAKRLKRKQKLKNKP 75
            R + ++E  + K      E+    ++    ++ K    + K  ++  +     +K+ N  
Sbjct: 899  RMMAKRELKKLKIEARSVERY---KKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLE 955

Query: 76   KKVKTEGKEEEEESEDDSKSEDENSDKDEDNKEGNEEVSERKTEIEQDENSVQE 129
                TE ++   + E    SE+E  +         EE+++ + E+ Q +   + 
Sbjct: 956  ITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKT 1009

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00