Psyllid ID: psy16342

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MSSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Secondary Structure (PSIPRED)
cccccccEEEEEEEEEEEcccccccccccccccccccccccccccccEEEEEEEEEEEcccccccEEEEHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEEccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEEEEEEEEEccccccccHHHHHHHHHHHHccccEEEEEEEEEEEEEEccccccccccHHHHHHHHHHHcHHHHccEEHHHHcHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEEEEcccccEEEEccc
Coil and Loop (DISEMBL)
mssskvpigylTRVEkfsachrlhsphltdeenkitygkcnnfhghghnyTVEVTlkgpiskergmvlNINDLKVYMVDAimvpmdhknldkdvpyfaDVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYetdknivlyrge
Flexible Loop (DISEMBL)
MSSSKVPIGYLTRVekfsachrlhsphltdeenKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLyevklyetdknivlyrge
Low Complexity Region (SEG)
MSSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Disordered region (IsUnstruct)
******PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLY***
Disordered Region (DISOPRED)
******P***LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Disordered Region (DISEMBL)
MSSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Disordered Region (DISPRO)
****KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
P48611	168	6-pyruvoyl tetrahydrobiop	yes	N/A	0.972	0.827	0.625	8e-50
Q90W95	147	6-pyruvoyl tetrahydrobiop	N/A	N/A	0.944	0.918	0.647	1e-48
Q03393	145	6-pyruvoyl tetrahydrobiop	yes	N/A	0.923	0.910	0.616	7e-42
Q5REZ5	145	6-pyruvoyl tetrahydrobiop	yes	N/A	0.923	0.910	0.616	8e-42
P27213	144	6-pyruvoyl tetrahydrobiop	yes	N/A	0.888	0.881	0.632	1e-41
Q9R1Z7	144	6-pyruvoyl tetrahydrobiop	yes	N/A	0.888	0.881	0.625	3e-41
O02058	140	Putative 6-pyruvoyl tetra	yes	N/A	0.958	0.978	0.507	2e-34
Q1ZXI0	135	6-pyruvoyl tetrahydrobiop	yes	N/A	0.902	0.955	0.503	2e-31
P80081	103	6-pyruvoyl tetrahydrobiop	N/A	N/A	0.629	0.873	0.426	4e-19
P65872	121	6-carboxy-5,6,7,8-tetrahy	yes	N/A	0.769	0.909	0.299	1e-05

>sp|P48611|PTPS_DROME 6-pyruvoyl tetrahydrobiopterin synthase OS=Drosophila melanogaster GN=pr PE=1 SV=1

 Score =  195 bits (495), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 87/139 (62%), Positives = 112/139 (80%)

Query: 4   SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
           S+ P+ +LTR E FSACHRLHSP L+D EN   +GKCNNFHGHGHNYTVE+T++GPI + 
Sbjct: 2   SQQPVAFLTRRETFSACHRLHSPQLSDAENLEVFGKCNNFHGHGHNYTVEITVRGPIDRR 61

Query: 64  RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
            GMVLNI +LK  +   IM  +DHKNLDKDV YFA+  ST+EN+A++IW+N++  +K+PE
Sbjct: 62  TGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWDNIRLQLKKPE 121

Query: 124 LLYEVKLYETDKNIVLYRG 142
           LLYEVK++ET KNI+ YRG
Sbjct: 122 LLYEVKIHETPKNIISYRG 140

Required for pigment and biopterin synthesis.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: 1EC: 2

>sp|Q90W95|PTPS_POERE 6-pyruvoyl tetrahydrobiopterin synthase OS=Poecilia reticulata GN=pts PE=2 SV=1

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 112/136 (82%), Gaps = 1/136 (0%)

Query: 8   IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
           IGY+TRV+ FSACHRLHS  L+DEENK  YGKCNN +GHGHNY VEVT++G I    GMV
Sbjct: 13  IGYITRVQSFSACHRLHSLRLSDEENKEVYGKCNNPYGHGHNYKVEVTVRGKIDPVTGMV 72

Query: 68  LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
           +N+ DLK  + + IM+P+DHKNLDKDVPYFADVVST+EN+A++IW+N+ K +    L YE
Sbjct: 73  MNLTDLKKCIEEVIMIPLDHKNLDKDVPYFADVVSTTENLAVYIWDNMAKALPA-SLPYE 131

Query: 128 VKLYETDKNIVLYRGE 143
           ++++ETDKNIV+YRGE
Sbjct: 132 IRIHETDKNIVVYRGE 147

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Poecilia reticulata (taxid: 8081)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q03393|PTPS_HUMAN 6-pyruvoyl tetrahydrobiopterin synthase OS=Homo sapiens GN=PTS PE=1 SV=1

 Score =  169 bits (427), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 1/133 (0%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           ++R   FSA HRL+S  L+DEEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct: 14  VSRRISFSASHRLYSKFLSDEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPATGMVMNL 73

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
            DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++    +LY+VK+
Sbjct: 74  ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLP-VGVLYKVKV 132

Query: 131 YETDKNIVLYRGE 143
           YETD NIV+Y+GE
Sbjct: 133 YETDNNIVVYKGE 145

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q5REZ5|PTPS_PONAB 6-pyruvoyl tetrahydrobiopterin synthase OS=Pongo abelii GN=PTS PE=2 SV=1

 Score =  168 bits (426), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 1/133 (0%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           ++R   FSA HRL+S  L+DEEN   +GKC+N +GHGHNY V VT+ G I    GMV+N+
Sbjct: 14  VSRRISFSASHRLYSKFLSDEENLKLFGKCSNPNGHGHNYKVVVTVHGEIDPATGMVMNL 73

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
            DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++    +LY+VKL
Sbjct: 74  ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLP-VGVLYKVKL 132

Query: 131 YETDKNIVLYRGE 143
           YETD NIV+Y+GE
Sbjct: 133 YETDNNIVVYKGE 145

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|P27213|PTPS_RAT 6-pyruvoyl tetrahydrobiopterin synthase OS=Rattus norvegicus GN=Pts PE=1 SV=1

 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 1/128 (0%)

Query: 16  KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
            FSA HRLHSP L+ EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+ DLK 
Sbjct: 18  SFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKE 77

Query: 76  YMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
           YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++     LY+VK+YETD 
Sbjct: 78  YMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGA-LYKVKVYETDN 136

Query: 136 NIVLYRGE 143
           NIV+Y+GE
Sbjct: 137 NIVVYKGE 144

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q9R1Z7|PTPS_MOUSE 6-pyruvoyl tetrahydrobiopterin synthase OS=Mus musculus GN=Pts PE=2 SV=2

 Score =  166 bits (421), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 1/128 (0%)

Query: 16  KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
            FSA HRLHSP L+DEEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+ DLK 
Sbjct: 18  SFSASHRLHSPSLSDEENLRVFGKCNNPNGHGHNYKVVVTVHGEIDPVTGMVMNLTDLKE 77

Query: 76  YMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
           YM +AIM P+DHKNLD DVPYFAD VST+ENVA++IW +L+K++     LY+VK++ETD 
Sbjct: 78  YMEEAIMKPLDHKNLDLDVPYFADAVSTTENVAVYIWESLQKLLPVGA-LYKVKVFETDN 136

Query: 136 NIVLYRGE 143
           NIV+Y+GE
Sbjct: 137 NIVVYKGE 144

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|O02058|PTPS_CAEEL Putative 6-pyruvoyl tetrahydrobiopterin synthase OS=Caenorhabditis elegans GN=ptps-1 PE=1 SV=2

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 1/138 (0%)

Query: 5   KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
           ++PI  + RV+ FSA HRLHS  L+D ENK T+GKCNN +GHGHNY  +V L+G +    
Sbjct: 3   RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTS 62

Query: 65  GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
           GMV ++  LK  M   ++  +DH+NLDKDV +F   VSTSENVAI+++  LK +M  P +
Sbjct: 63  GMVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSV 121

Query: 125 LYEVKLYETDKNIVLYRG 142
           LY+V + ET KNI  Y+G
Sbjct: 122 LYKVTIEETPKNIFTYKG 139

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Caenorhabditis elegans (taxid: 6239)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|Q1ZXI0|PTPS_DICDI 6-pyruvoyl tetrahydrobiopterin synthase OS=Dictyostelium discoideum GN=ptsA PE=3 SV=1

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 94/133 (70%), Gaps = 4/133 (3%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           LTR E FS+ HRL+S  L+ EENK  YGKC N   HGHNY +EV++KG + ++ GM +NI
Sbjct: 7   LTRREVFSSSHRLYSDKLSLEENKKIYGKCIN--SHGHNYVLEVSIKGAVKEDIGMFMNI 64

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
            +LK  + + +M  +DHKNL+ DVP    +V+T+EN++IFIW+ L   +K  + LYEVK+
Sbjct: 65  TELKEILKEKVMDKLDHKNLENDVPELKGIVTTTENLSIFIWDQLFPSLK--DFLYEVKI 122

Query: 131 YETDKNIVLYRGE 143
            ET+ N V+YRGE
Sbjct: 123 LETENNFVVYRGE 135

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Dictyostelium discoideum (taxid: 44689)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|P80081|PTPS_SALSA 6-pyruvoyl tetrahydrobiopterin synthase (Fragments) OS=Salmo salar GN=pts PE=1 SV=2

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 46/136 (33%)

Query: 8   IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
           IGY+TRV+ F A HRLHSP L                                      V
Sbjct: 14  IGYITRVQSFCASHRLHSPTL--------------------------------------V 35

Query: 68  LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
           +NI ++K ++ + I  P+DHKNLDKDVPYFA+V     NVA++I +N+ K +    LLYE
Sbjct: 36  MNITNIKEHIEEVI--PLDHKNLDKDVPYFANV-----NVAVYIXDNMVKQLP-ANLLYE 87

Query: 128 VKLYETDKNIVLYRGE 143
           VK++ETDKNIV+YRGE
Sbjct: 88  VKIHETDKNIVVYRGE 103

Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.

Salmo salar (taxid: 8030)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 2

>sp|P65872|QUED_SHIFL 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Shigella flexneri GN=queD PE=3 SV=1

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)

Query: 17  FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
           F A HRL  PH+ +        KC   HGH  ++ V + + G +    G +++  +LK  
Sbjct: 12  FEAAHRL--PHVPEGH------KCGRLHGH--SFMVRLEITGEVDPHTGWIIDFAELKA- 60

Query: 77  MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
                   +DH  L+ D+P   +   TSE +A +IW+ +K ++    LL  V + ET   
Sbjct: 61  AFKPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 114

Query: 137 IVLYRGE 143
             +YRGE
Sbjct: 115 GCIYRGE 121

Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
156545440	142	PREDICTED: 6-pyruvoyl tetrahydrobiopteri	0.958	0.964	0.671	2e-50
118785718	175	AGAP008730-PA [Anopheles gambiae str. PE	0.979	0.8	0.671	1e-49
321478828	143	hypothetical protein DAPPUDRAFT_230142 [	0.972	0.972	0.654	1e-49
348502297	148	PREDICTED: 6-pyruvoyl tetrahydrobiopteri	0.986	0.952	0.640	3e-49
157121013	170	6-pyruvoyltetrahydropterin synthase, put	0.958	0.805	0.664	5e-49
383856655	143	PREDICTED: 6-pyruvoyl tetrahydrobiopteri	0.958	0.958	0.686	7e-49
432925255	147	PREDICTED: 6-pyruvoyl tetrahydrobiopteri	0.986	0.959	0.633	9e-49
213513360	148	6-pyruvoyl tetrahydropterin synthase [Sa	0.944	0.912	0.669	2e-48
380023554	142	PREDICTED: 6-pyruvoyl tetrahydrobiopteri	0.958	0.964	0.664	2e-48
195115874	168	GI12528 [Drosophila mojavensis] gi|19391	0.972	0.827	0.625	2e-48

>gi|156545440|ref|XP_001606725.1| PREDICTED: 6-pyruvoyl tetrahydrobiopterin synthase-like [Nasonia vitripennis]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 115/137 (83%)

Query: 7   PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGM 66
           P+ YLTR E  S+CHRLHSPHL+DEEN   YGKCNN+ GHGHNYTVEVT++GP+    GM
Sbjct: 4   PVAYLTRKESISSCHRLHSPHLSDEENAKIYGKCNNYWGHGHNYTVEVTVRGPVDPTTGM 63

Query: 67  VLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLY 126
           V+NI+DLKVYM   +M  +DHKNLDKDV YF +VVST+ENVAI++++ +KK++ +PELLY
Sbjct: 64  VMNISDLKVYMKKILMDQLDHKNLDKDVDYFKNVVSTTENVAIYVFDEIKKLLPQPELLY 123

Query: 127 EVKLYETDKNIVLYRGE 143
           EVK+YETD NIV+YRGE
Sbjct: 124 EVKIYETDNNIVIYRGE 140

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118785718|ref|XP_314842.3| AGAP008730-PA [Anopheles gambiae str. PEST] gi|116127868|gb|EAA10120.3| AGAP008730-PA [Anopheles gambiae str. PEST]

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 114/140 (81%)

Query: 4   SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
           S  P  YLTR E FSACHRLHSP L++E N+  YGKCNN +GHGHNYTVEVT++GP+  +
Sbjct: 2   SSRPQVYLTRKECFSACHRLHSPFLSEEANRQVYGKCNNPNGHGHNYTVEVTVRGPVDGK 61

Query: 64  RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
            GMV+NI DLK YM  AIM  +DH NLDKDVPYF ++ ST+ENVAIFIW++LK IM +PE
Sbjct: 62  TGMVMNITDLKEYMNQAIMKKLDHLNLDKDVPYFKNLASTTENVAIFIWDSLKLIMDKPE 121

Query: 124 LLYEVKLYETDKNIVLYRGE 143
           LLYE+K++ETDKN V+YRGE
Sbjct: 122 LLYEIKIHETDKNAVIYRGE 141

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321478828|gb|EFX89785.1| hypothetical protein DAPPUDRAFT_230142 [Daphnia pulex]

 Score =  200 bits (509), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 91/139 (65%), Positives = 116/139 (83%)

Query: 5   KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
           + PI YLTR E FSA HRLHSP LTDEEN+  + KCNN +GHGHNYTVEVT++GPI ++ 
Sbjct: 3   RRPIAYLTRRETFSASHRLHSPLLTDEENRKIFSKCNNPNGHGHNYTVEVTIRGPIDQKT 62

Query: 65  GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
           GMV+N++DLK+YM ++IM  MDHKNLDKDVP+F ++VST+ENVA+FIWN+L   +    L
Sbjct: 63  GMVMNLSDLKIYMEESIMKVMDHKNLDKDVPHFHNLVSTTENVAVFIWNSLSAQLPNSSL 122

Query: 125 LYEVKLYETDKNIVLYRGE 143
           LYEVK++ETDKNI++YRGE
Sbjct: 123 LYEVKVFETDKNIMVYRGE 141

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348502297|ref|XP_003438704.1| PREDICTED: 6-pyruvoyl tetrahydrobiopterin synthase-like [Oreochromis niloticus]

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 118/142 (83%), Gaps = 1/142 (0%)

Query: 2   SSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPIS 61
           SS+   IGY++R+E FSACHRLHS HL+DEENK  YGKCNN +GHGHNY VEVT++G I 
Sbjct: 8   SSTAERIGYISRIESFSACHRLHSIHLSDEENKKVYGKCNNPNGHGHNYKVEVTVRGKID 67

Query: 62  KERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKE 121
            + GMV+N+ DLK  + + IM+P+DHKNLDKDVPYF  VVST+ENVA++IW+N+ K++  
Sbjct: 68  AKTGMVMNLTDLKKCIEEVIMIPLDHKNLDKDVPYFTTVVSTTENVAVYIWDNMVKVLP- 126

Query: 122 PELLYEVKLYETDKNIVLYRGE 143
           P LLYE+K++ETDKN+V+YRGE
Sbjct: 127 PGLLYEIKIHETDKNVVVYRGE 148

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|157121013|ref|XP_001653731.1| 6-pyruvoyltetrahydropterin synthase, putative [Aedes aegypti] gi|157121015|ref|XP_001653732.1| 6-pyruvoyltetrahydropterin synthase, putative [Aedes aegypti] gi|108882978|gb|EAT47203.1| AAEL001642-PA [Aedes aegypti] gi|403182440|gb|EJY57388.1| AAEL001642-PB [Aedes aegypti]

 Score =  198 bits (504), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 91/137 (66%), Positives = 113/137 (82%)

Query: 7   PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGM 66
           P+ YLTR E FSACHRLHSP L++E N+  YGKCNN +GHGHNYTVEVT++GP+  + GM
Sbjct: 4   PLVYLTRKECFSACHRLHSPFLSEEANRQVYGKCNNPNGHGHNYTVEVTVRGPVDPKTGM 63

Query: 67  VLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLY 126
           V+NI DLK YM   IM  +DH NLDKDVPYF ++ ST+ENVAIFIW++LK +M +P+LLY
Sbjct: 64  VMNITDLKKYMDQTIMKKLDHLNLDKDVPYFKNLASTTENVAIFIWDSLKLVMPKPDLLY 123

Query: 127 EVKLYETDKNIVLYRGE 143
           EVK+YETDKN V+YRG+
Sbjct: 124 EVKIYETDKNSVIYRGQ 140

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856655|ref|XP_003703823.1| PREDICTED: 6-pyruvoyl tetrahydrobiopterin synthase-like [Megachile rotundata]

 Score =  198 bits (503), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 94/137 (68%), Positives = 115/137 (83%)

Query: 7   PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGM 66
           PI YLTR E  S+CHRLH+ +L+DEENK TYGKCNN+ GHGHNYTVEVT+ GP+    GM
Sbjct: 4   PIAYLTRKEVISSCHRLHNNNLSDEENKNTYGKCNNYWGHGHNYTVEVTVCGPVDPVTGM 63

Query: 67  VLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLY 126
           V+N++ LK+YM   +M  +DHKNLDKDVPYF +VVST+ENVAI+I+N LKK+M  PELLY
Sbjct: 64  VMNLSHLKLYMKKVLMDQLDHKNLDKDVPYFKNVVSTTENVAIYIYNELKKVMPCPELLY 123

Query: 127 EVKLYETDKNIVLYRGE 143
           EVK+YETDKNIV+Y+GE
Sbjct: 124 EVKIYETDKNIVVYKGE 140

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432925255|ref|XP_004080720.1| PREDICTED: 6-pyruvoyl tetrahydrobiopterin synthase-like [Oryzias latipes]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 90/142 (63%), Positives = 118/142 (83%), Gaps = 1/142 (0%)

Query: 2   SSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPIS 61
           SS+   +GY+TR++ FSACHRLHS HL+DEEN   YGKCNN +GHGHNYTVEVT++G I 
Sbjct: 7   SSAAERVGYITRLQSFSACHRLHSVHLSDEENAKVYGKCNNPNGHGHNYTVEVTVRGKID 66

Query: 62  KERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKE 121
           +  GMV+N+ DLK  + + IM+P+DHKNLDKDVPYFA VVST+EN+A++IW+N+ K++  
Sbjct: 67  RVTGMVMNLTDLKRCIEEVIMIPLDHKNLDKDVPYFATVVSTTENLAVYIWDNMVKVLP- 125

Query: 122 PELLYEVKLYETDKNIVLYRGE 143
           P  LYE+K++ETDKNIV+YRGE
Sbjct: 126 PGQLYEIKIHETDKNIVVYRGE 147

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|213513360|ref|NP_001134835.1| 6-pyruvoyl tetrahydropterin synthase [Salmo salar] gi|209736438|gb|ACI69088.1| 6-pyruvoyl tetrahydrobiopterin synthase [Salmo salar] gi|209737562|gb|ACI69650.1| 6-pyruvoyl tetrahydrobiopterin synthase [Salmo salar]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 115/136 (84%), Gaps = 1/136 (0%)

Query: 8   IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
           IGY+TRV+ FSACHRLHSP L+DE NK  +GKCNN +GHGHNY VEVT++G I +  GMV
Sbjct: 14  IGYITRVQSFSACHRLHSPTLSDEVNKRIFGKCNNPNGHGHNYKVEVTVRGKIDRHTGMV 73

Query: 68  LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
           +NI DLK ++ + IM+P+DHKNLDKDVPYFA+VVST+ENVA++IW+N+ K +    LLYE
Sbjct: 74  MNITDLKQHIEEVIMIPLDHKNLDKDVPYFANVVSTTENVAVYIWDNMVKQLP-ANLLYE 132

Query: 128 VKLYETDKNIVLYRGE 143
           VK++ETDKNIV+YRGE
Sbjct: 133 VKIHETDKNIVVYRGE 148

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380023554|ref|XP_003695583.1| PREDICTED: 6-pyruvoyl tetrahydrobiopterin synthase-like [Apis florea]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/137 (66%), Positives = 114/137 (83%)

Query: 7   PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGM 66
           PI YLTR E  S+CHRLH+ +LT+EENK  YGKCNN+ GHGHNYTVEVT+ GP+    GM
Sbjct: 4   PIAYLTRKEVISSCHRLHNENLTEEENKKIYGKCNNYWGHGHNYTVEVTVCGPVDSITGM 63

Query: 67  VLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLY 126
           V+NI+DLK+YM   +M  +DHKNLDKDVPYF +V+ST+ENVAI+++N LKKIM   +LLY
Sbjct: 64  VMNISDLKLYMKKVLMDQLDHKNLDKDVPYFKNVISTTENVAIYVFNELKKIMPNSDLLY 123

Query: 127 EVKLYETDKNIVLYRGE 143
           EVK++ETDKN+V+YRGE
Sbjct: 124 EVKIFETDKNVVIYRGE 140

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195115874|ref|XP_002002481.1| GI12528 [Drosophila mojavensis] gi|193913056|gb|EDW11923.1| GI12528 [Drosophila mojavensis]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/139 (62%), Positives = 112/139 (80%)

Query: 4   SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
           S+ P+ +LTR E FSACHRLHSP L+D EN   +GKCNNFHGHGHNYTVE+T++GPI + 
Sbjct: 2   SQQPVAFLTRRETFSACHRLHSPQLSDAENLEIFGKCNNFHGHGHNYTVELTVRGPIDQR 61

Query: 64  RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
            GMVLNI +LK  +   IM  +DHKNLDKDV YFA + ST+EN+A++IW+N++  +K+PE
Sbjct: 62  TGMVLNITELKDAIETVIMKRLDHKNLDKDVEYFAKIPSTTENLAVYIWDNIRTHLKKPE 121

Query: 124 LLYEVKLYETDKNIVLYRG 142
           LLYEVK++ET KNI+ YRG
Sbjct: 122 LLYEVKIFETPKNIITYRG 140

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
FB|FBgn0003141	168	pr "purple" [Drosophila melano	0.972	0.827	0.625	3.3e-47
ZFIN|ZDB-GENE-070615-3	143	pts "6-pyruvoyltetrahydropteri	0.930	0.930	0.634	1.3e-45
UNIPROTKB|F1NL99	153	PTS "Uncharacterized protein"	0.993	0.928	0.608	2.4e-44
RGD|68367	144	Pts "6-pyruvoyl-tetrahydropter	0.923	0.916	0.624	8.4e-42
MGI|MGI:1338783	144	Pts "6-pyruvoyl-tetrahydropter	0.923	0.916	0.616	1.7e-41
UNIPROTKB|F1SM93	146	PTS "6-pyruvoyl tetrahydrobiop	0.923	0.904	0.616	3.6e-41
UNIPROTKB|E2RTE8	150	PTS "Uncharacterized protein"	0.923	0.88	0.616	5.9e-41
UNIPROTKB|F1MX94	145	PTS "6-pyruvoyl tetrahydrobiop	0.923	0.910	0.601	7.5e-41
UNIPROTKB|Q03393	145	PTS "6-pyruvoyl tetrahydrobiop	0.923	0.910	0.616	7.5e-41
WB|WBGene00015010	140	ptps-1 [Caenorhabditis elegans	0.958	0.978	0.507	7.4e-34

FB|FBgn0003141 pr "purple" [Drosophila melanogaster (taxid:7227)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 87/139 (62%), Positives = 112/139 (80%)

Query:     4 SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
             S+ P+ +LTR E FSACHRLHSP L+D EN   +GKCNNFHGHGHNYTVE+T++GPI + 
Sbjct:     2 SQQPVAFLTRRETFSACHRLHSPQLSDAENLEVFGKCNNFHGHGHNYTVEITVRGPIDRR 61

Query:    64 RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
              GMVLNI +LK  +   IM  +DHKNLDKDV YFA+  ST+EN+A++IW+N++  +K+PE
Sbjct:    62 TGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWDNIRLQLKKPE 121

Query:   124 LLYEVKLYETDKNIVLYRG 142
             LLYEVK++ET KNI+ YRG
Sbjct:   122 LLYEVKIHETPKNIISYRG 140

GO:0006728 "pteridine biosynthetic process" evidence=IDA

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=ISS;NAS

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA;NAS

ZFIN|ZDB-GENE-070615-3 pts "6-pyruvoyltetrahydropterin synthase" [Danio rerio (taxid:7955)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 85/134 (63%), Positives = 112/134 (83%)

Query:     8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
             + ++TRV  FSACHRLHS  L+DEENK T+GKCNN +GHGHNYTVEVT++G I K  GMV
Sbjct:    11 VAFITRVCSFSACHRLHSKCLSDEENKRTFGKCNNPNGHGHNYTVEVTVRGKIDKNTGMV 70

Query:    68 LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
             +N+ DLK ++ +A+M P+DHKNLD DVPYFADVVST+EN+++FIW+ L+K++   + LYE
Sbjct:    71 MNLTDLKEFIEEAVMKPLDHKNLDLDVPYFADVVSTTENLSVFIWDGLQKLLPH-DSLYE 129

Query:   128 VKLYETDKNIVLYR 141
             +K+YET KNIV+YR
Sbjct:   130 IKVYETAKNIVIYR 143

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

UNIPROTKB|F1NL99 PTS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 87/143 (60%), Positives = 110/143 (76%)

Query:     1 MSSSKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI 60
             M+     +  L+R   FSACHRLHS  L+DEEN   +GKCNN +GHGHNY V VT++G I
Sbjct:     6 MAPPAARLARLSRTASFSACHRLHSKSLSDEENLKLFGKCNNPNGHGHNYKVIVTVRGEI 65

Query:    61 SKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMK 120
                 GMV+N+ DLK YM  AIM P+DHKNLDKDVPYFA+VVST+ENVA+FIW NLK+++ 
Sbjct:    66 DPVSGMVINLTDLKEYMQQAIMEPLDHKNLDKDVPYFAEVVSTTENVAVFIWENLKRLLP 125

Query:   121 EPELLYEVKLYETDKNIVLYRGE 143
                +LY+VK+YETD+NIV+Y+GE
Sbjct:   126 AG-MLYKVKVYETDQNIVVYKGE 147

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

RGD|68367 Pts "6-pyruvoyl-tetrahydropterin synthase" [Rattus norvegicus (taxid:10116)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 83/133 (62%), Positives = 104/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             L+R+  FSA HRLHSP L+ EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct:    13 LSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNL 72

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++    L Y+VK+
Sbjct:    73 TDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGAL-YKVKV 131

Query:   131 YETDKNIVLYRGE 143
             YETD NIV+Y+GE
Sbjct:   132 YETDNNIVVYKGE 144

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=ISO;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA;ISO;TAS

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:1338783 Pts "6-pyruvoyl-tetrahydropterin synthase" [Mus musculus (taxid:10090)]

 Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
 Identities = 82/133 (61%), Positives = 104/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             L+R+  FSA HRLHSP L+DEEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct:    13 LSRLVSFSASHRLHSPSLSDEENLRVFGKCNNPNGHGHNYKVVVTVHGEIDPVTGMVMNL 72

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFAD VST+ENVA++IW +L+K++    L Y+VK+
Sbjct:    73 TDLKEYMEEAIMKPLDHKNLDLDVPYFADAVSTTENVAVYIWESLQKLLPVGAL-YKVKV 131

Query:   131 YETDKNIVLYRGE 143
             +ETD NIV+Y+GE
Sbjct:   132 FETDNNIVVYKGE 144

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005739 "mitochondrion" evidence=IDA

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IDA

GO:0016829 "lyase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO;IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1SM93 PTS "6-pyruvoyl tetrahydrobiopterin synthase" [Sus scrofa (taxid:9823)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 82/133 (61%), Positives = 104/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             ++R+  FSA HRLHS  L++EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct:    15 VSRLASFSASHRLHSKSLSNEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPVTGMVMNL 74

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL+K +    +LY+VK+
Sbjct:    75 TDLKKYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQKYLPAG-VLYKVKV 133

Query:   131 YETDKNIVLYRGE 143
             YETD NIV+Y+GE
Sbjct:   134 YETDNNIVVYKGE 146

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RTE8 PTS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 82/133 (61%), Positives = 104/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             ++R+  FSA HRLHS  L++EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct:    19 VSRLVSFSATHRLHSKSLSNEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPVTGMVMNL 78

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL+K +    +LY+VK+
Sbjct:    79 TDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQKFLPLG-VLYKVKV 137

Query:   131 YETDKNIVLYRGE 143
             YETD NIV+Y+GE
Sbjct:   138 YETDNNIVVYKGE 150

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

UNIPROTKB|F1MX94 PTS "6-pyruvoyl tetrahydrobiopterin synthase" [Bos taurus (taxid:9913)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 80/133 (60%), Positives = 104/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             ++R+  FSA HRLHS  L++EEN   +GKCNN +GHGHNY V VT+ G +    GMV+N+
Sbjct:    14 VSRLVSFSATHRLHSKSLSNEENLKLFGKCNNPNGHGHNYKVVVTVHGEVDPVTGMVMNL 73

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFAD+VST+ENVA++IW NL+K +    +LY+VK+
Sbjct:    74 TDLKKYMEEAIMKPLDHKNLDLDVPYFADIVSTTENVAVYIWENLQKFLPVG-VLYKVKV 132

Query:   131 YETDKNIVLYRGE 143
             YETD NIV+Y+GE
Sbjct:   133 YETDNNIVVYKGE 145

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q03393 PTS "6-pyruvoyl tetrahydrobiopterin synthase" [Homo sapiens (taxid:9606)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 82/133 (61%), Positives = 105/133 (78%)

Query:    11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
             ++R   FSA HRL+S  L+DEEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct:    14 VSRRISFSASHRLYSKFLSDEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPATGMVMNL 73

Query:    71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
              DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++    +LY+VK+
Sbjct:    74 ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLPVG-VLYKVKV 132

Query:   131 YETDKNIVLYRGE 143
             YETD NIV+Y+GE
Sbjct:   133 YETDNNIVVYKGE 145

GO:0046872 "metal ion binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=TAS

GO:0007417 "central nervous system development" evidence=TAS

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046209 "nitric oxide metabolic process" evidence=TAS

GO:0050999 "regulation of nitric-oxide synthase activity" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

WB|WBGene00015010 ptps-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 70/138 (50%), Positives = 95/138 (68%)

Query:     5 KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
             ++PI  + RV+ FSA HRLHS  L+D ENK T+GKCNN +GHGHNY  +V L+G +    
Sbjct:     3 RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTS 62

Query:    65 GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
             GMV ++  LK  M   ++  +DH+NLDKDV +F   VSTSENVAI+++  LK +M  P +
Sbjct:    63 GMVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSV 121

Query:   125 LYEVKLYETDKNIVLYRG 142
             LY+V + ET KNI  Y+G
Sbjct:   122 LYKVTIEETPKNIFTYKG 139

GO:0003874 "6-pyruvoyltetrahydropterin synthase activity" evidence=IEA

GO:0006729 "tetrahydrobiopterin biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P27213	PTPS_RAT	4, ., 2, ., 3, ., 1, 2	0.6328	0.8881	0.8819	yes	N/A
O02058	PTPS_CAEEL	4, ., 2, ., 3, ., 1, 2	0.5072	0.9580	0.9785	yes	N/A
Q5REZ5	PTPS_PONAB	4, ., 2, ., 3, ., 1, 2	0.6165	0.9230	0.9103	yes	N/A
Q1ZXI0	PTPS_DICDI	4, ., 2, ., 3, ., 1, 2	0.5037	0.9020	0.9555	yes	N/A
Q90W95	PTPS_POERE	4, ., 2, ., 3, ., 1, 2	0.6470	0.9440	0.9183	N/A	N/A
P48611	PTPS_DROME	4, ., 2, ., 3, ., 1, 2	0.6258	0.9720	0.8273	yes	N/A
Q9R1Z7	PTPS_MOUSE	4, ., 2, ., 3, ., 1, 2	0.625	0.8881	0.8819	yes	N/A
Q03393	PTPS_HUMAN	4, ., 2, ., 3, ., 1, 2	0.6165	0.9230	0.9103	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.2.3	0.976
3rd Layer	4.2.3.12	0.991

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
cd00470	135	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthas	6e-66
TIGR00039	124	TIGR00039, 6PTHBS, 6-pyruvoyl tetrahydropterin syn	2e-39
pfam01242	121	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synth	5e-39
COG0720	127	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synt	2e-19
TIGR03367	91	TIGR03367, queuosine_QueD, queuosine biosynthesis	1e-16

>gnl|CDD|238264 cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)

 Score =  196 bits (499), Expect = 6e-66
 Identities = 88/136 (64%), Positives = 109/136 (80%), Gaps = 1/136 (0%)

Query: 8   IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
              LTR   FSACHRLHSP L+DEEN   +GKCNN +GHGHNY VEVT++G I    GMV
Sbjct: 1   SATLTRRFSFSACHRLHSPPLSDEENLEVFGKCNNPNGHGHNYKVEVTVRGEIDPVTGMV 60

Query: 68  LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
           +N+ DLK  + +AIM P+DHKNLD DVPYFADVVST+EN+A++IW+NL+K++    LLYE
Sbjct: 61  MNLTDLKKAIEEAIMKPLDHKNLDDDVPYFADVVSTTENLAVYIWDNLQKVLPV-GLLYE 119

Query: 128 VKLYETDKNIVLYRGE 143
           VK++ETDKNIV+YRGE
Sbjct: 120 VKVHETDKNIVVYRGE 135

Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits. Length = 135

>gnl|CDD|232793 TIGR00039, 6PTHBS, 6-pyruvoyl tetrahydropterin synthase/QueD family protein

 Score =  129 bits (325), Expect = 2e-39
 Identities = 52/133 (39%), Positives = 73/133 (54%), Gaps = 14/133 (10%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           + +   FSA HRL              GKC N   HGH+Y V+V + G    + GMV++ 
Sbjct: 4   IHKEFSFSAAHRLPGHE----------GKCGN--LHGHSYKVDVEVSGERDPKTGMVMDF 51

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
           +DLK  + + I  P+DHK L+ DV Y      TSENVA++I++NLK+ +   E L +VK 
Sbjct: 52  SDLKKIVKEVIDEPLDHKLLNDDVNY--LENPTSENVAVYIFDNLKEYLIPVENLVKVKE 109

Query: 131 YETDKNIVLYRGE 143
            ET   I +YRG 
Sbjct: 110 EETPAEIRIYRGP 122

This model has been downgraded from hypothetical_equivalog to subfamily. The animal enzymes are known to be 6-pyruvoyl tetrahydropterin synthase. The function of the bacterial branch of the sequence lineage had been thought to be the same, but many are now taken to be QueD, and enzyme of queuosine biosynthesis. Queuosine is a hypermodified base in the wobble position of some tRNAs in most species. A new model is built to be the QueD equivalog model [Protein synthesis, tRNA and rRNA base modification]. Length = 124

>gnl|CDD|216384 pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase

 Score =  127 bits (321), Expect = 5e-39
 Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 15/135 (11%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            +T+   F A HRL              GKC+  HGH  NY VEVT++G    E GMV++
Sbjct: 1   TITKRFHFDAAHRLPGY----------PGKCSRLHGH--NYRVEVTVEGEELDETGMVVD 48

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL-LYEV 128
             +LK  +   ++  +DHK L+ DVP FA V  T+EN+A +IW+ LK  ++   + L++V
Sbjct: 49  FGELKKIL-KEVLERLDHKLLN-DVPEFAGVNPTAENIARYIWDRLKPRLQGGGVRLHKV 106

Query: 129 KLYETDKNIVLYRGE 143
           +++ET  N   YRGE
Sbjct: 107 RVWETPTNWAEYRGE 121

6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits. Length = 121

>gnl|CDD|223792 COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]

 Score = 77.7 bits (192), Expect = 2e-19
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 18/137 (13%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           +T+   F A HRL              GKC     HGH Y VEV ++G    E GMV++ 
Sbjct: 5   ITKRFSFDAAHRL----------PGHPGKCGR--LHGHTYKVEVEIEGEELDEHGMVVDF 52

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKE----PELLY 126
            +LK   V  I+  +DHK L+ D+  F     T+EN+A +I++ LK ++ +         
Sbjct: 53  GELKKA-VKEILDELDHKLLN-DIEEFDKENPTAENIAKWIFDRLKVVLPDEAETSAEEL 110

Query: 127 EVKLYETDKNIVLYRGE 143
              + ET  +   YR  
Sbjct: 111 REYVAETPTSGAEYRKR 127

Length = 127

>gnl|CDD|234186 TIGR03367, queuosine_QueD, queuosine biosynthesis protein QueD

 Score = 69.5 bits (171), Expect = 1e-16
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 16/107 (14%)

Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           +T+   F A HRL  P           GKC N HGH   Y VEVT+ G +  E GMV++ 
Sbjct: 1   ITKEFTFDAAHRL--PGYP--------GKCANLHGH--TYKVEVTVSGEVLDEAGMVMDF 48

Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKK 117
           +DLK   V  ++  +DH  L+ D+P   +   T+EN+A +I++ LK 
Sbjct: 49  SDLKAI-VKEVVDRLDHALLN-DIPGLENP--TAENLARWIYDRLKA 91

Members of this protein family, closely related to eukaryotic 6-pyruvoyl tetrahydrobiopterin synthase enzymes, are the QueD protein of queuosine biosynthesis. Queuosine is a hypermodified base in the wobble position of tRNAs for Tyr, His, Asp, and Asn in many species. This modification, although widespread, appears not to be important for viability. The queuosine precursor made by this enzyme may be converted instead to archeaosine as in some Archaea [Protein synthesis, tRNA and rRNA base modification]. Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
cd00470	135	PTPS 6-pyruvoyl tetrahydropterin synthase (PTPS).	100.0
TIGR00039	124	6PTHBS 6-pyruvoyl tetrahydropterin synthase/QueD f	100.0
PF01242	123	PTPS: 6-pyruvoyl tetrahydropterin synthase; InterP	100.0
COG0720	127	6-pyruvoyl-tetrahydropterin synthase [Coenzyme met	100.0
TIGR03112	113	6_pyr_pter_rel 6-pyruvoyl tetrahydropterin synthas	100.0
KOG4105|consensus	141		100.0
TIGR03367	92	queuosine_QueD queuosine biosynthesis protein QueD	100.0
COG1539	121	FolB Dihydroneopterin aldolase [Coenzyme metabolis	87.0

>cd00470 PTPS 6-pyruvoyl tetrahydropterin synthase (PTPS)

Probab=100.00  E-value=4.1e-47  Score=278.46  Aligned_cols=134  Identities=66%  Similarity=1.067  Sum_probs=124.4

Q ss_pred             EEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342          9 GYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus         9 ~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .+|+|++.|+|||+|+.++||+++|++.+|||+++++|||||+|+|+|+|+.++..||||||++||++++++|.+.|||+
T Consensus         2 ~~i~~~~~F~aaH~l~~~~~~~~~n~~~~gkC~~~~lHGH~y~v~v~v~g~~~~~~GmviDF~~lk~~l~~~i~~~lDH~   81 (135)
T cd00470           2 ATLTRRFSFSACHRLHSPPLSDEENLEVFGKCNNPNGHGHNYKVEVTVRGEIDPVTGMVMNLTDLKKAIEEAIMKPLDHK   81 (135)
T ss_pred             EEEEEEEEEecccccCCCccchhhcccCCCcCCCCCccCCCeEEEEEEEEeEcCCCCEEEEHHHHHHHHHHHHHhhcCCc
Confidence            57999999999999999999999999999999944489999999999999988778999999999999988899999999


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      +||+..|+|...+||+|+||+|||++|++.|+. ..+.+|+|||||+++|+|+++
T Consensus        82 ~Ln~~~~~~~~~~PTaEniA~~i~~~l~~~l~~-~~l~~V~v~Et~~~~a~y~~~  135 (135)
T cd00470          82 NLDDDVPYFADVVSTTENLAVYIWDNLQKVLPV-GLLYEVKVHETDKNIVVYRGE  135 (135)
T ss_pred             eeccccccccCCCCCHHHHHHHHHHHHHhhcCC-CeEEEEEEEeCCCCEEEEecC
Confidence            999556778778999999999999999999985 669999999999999999975

Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.

>TIGR00039 6PTHBS 6-pyruvoyl tetrahydropterin synthase/QueD family protein

Probab=100.00  E-value=3.4e-41  Score=243.69  Aligned_cols=122  Identities=41%  Similarity=0.600  Sum_probs=109.1

Q ss_pred             EEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCc
Q psy16342          8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDH   87 (143)
Q Consensus         8 ~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH   87 (143)
                      |+.|+++++|+|||++++++          |+|++  +|||||+|+|+|+|+.++..||||||++||+++++++.+.|||
T Consensus         1 ~~~i~~~~~F~aaH~l~~~~----------g~c~~--lHGH~y~v~v~v~g~~~~~~G~viDf~~lk~~~~~~~~~~lDH   68 (124)
T TIGR00039         1 MFGIHKEFSFSAAHRLPGHE----------GKCGN--LHGHSYKVDVEVSGERDPKTGMVMDFSDLKKIVKEVIDEPLDH   68 (124)
T ss_pred             CEEEEEEEEEeCCCCcCCCC----------CCCCC--ccCCcEEEEEEEEEeeCCCceEEEEHHHHHHHHHHHhccCCCC
Confidence            68999999999999998864          89998  8999999999999988888999999999999999944444999


Q ss_pred             ccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         88 KNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        88 ~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ++|| +.+.+ ..+||+|+||+||+++|++.++.++++++|+|||||+++|+|+++
T Consensus        69 ~~Ln-~~~~~-~~~pT~Enia~~i~~~l~~~l~~~~~~~~V~v~Et~~~~a~y~~~  122 (124)
T TIGR00039        69 KLLN-DDVNY-LENPTSENVAVYIFDNLKEYLIPVENLVKVKEEETPAEIRIYRGP  122 (124)
T ss_pred             ceec-cCCCC-CCCCCHHHHHHHHHHHHHHhcCCCCeEEEEEEEECCCcEEEEeCC
Confidence            9999 44332 358999999999999999998777889999999999999999874

This model has been downgraded from hypothetical_equivalog to subfamily. The animal enzymes are known to be 6-pyruvoyl tetrahydropterin synthase. The function of the bacterial branch of the sequence lineage had been thought to be the same, but many are now taken to be QueD, and enzyme of queuosine biosynthesis. Queuosine is a hypermodified base in the wobble position of some tRNAs in most species. A new model is built to be the QueD equivalog model.

>PF01242 PTPS: 6-pyruvoyl tetrahydropterin synthase; InterPro: IPR007115 The complex organic chemistry involved in the transformation of GTP to tetrahydrobiopterin is catalysed by only three enzymes: GTP cyclohydrolase I, 6-pyruvoyltetrahydropterin synthase and sepiapterin reductase

Probab=100.00  E-value=4.6e-42  Score=247.07  Aligned_cols=121  Identities=43%  Similarity=0.670  Sum_probs=107.8

Q ss_pred             EEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCccc
Q psy16342         10 YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKN   89 (143)
Q Consensus        10 ~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH~~   89 (143)
                      +|+|+++|+|||++++++          |+|++  ||||||+|+|+|+|+.++++|||+||++||+++++ |++.|||++
T Consensus         1 ~I~~~~~f~aaH~l~~~~----------g~c~~--lHGH~y~v~v~v~g~~~~~~g~v~DF~~lk~~~~~-i~~~lDh~~   67 (123)
T PF01242_consen    1 YITKKFKFSAAHRLPGHD----------GKCER--LHGHSYRVEVEVEGEELDEDGMVVDFGDLKKIIKE-IDDQLDHKF   67 (123)
T ss_dssp             EEEEEEEEEEEE--TTTT----------GGGGS--SEEEEEEEEEEEEEESSTTTSSSS-HHHHHHHHHH-HHHHHTTEE
T ss_pred             CEEEEEEEEeEEecCCCC----------CCccc--ccCCEEEEEEEEEEeeCCCCCEEEEHHHHHHHHHH-HHHHhCccc
Confidence            689999999999999764          99999  79999999999999988889999999999999999 999999999


Q ss_pred             ccCcCCCCCCCC-CCHHHHHHHHHHHHHhhc-CCCceEEEEEEEecCCCEEEEecC
Q psy16342         90 LDKDVPYFADVV-STSENVAIFIWNNLKKIM-KEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        90 Ln~d~~~f~~~~-pT~E~lA~~i~~~l~~~l-~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ||.++|.|+..+ ||+|+||+||+++|++.+ +.++++.+|+|+|||+++|+|++|
T Consensus        68 Ln~~~~~~~~~~~pT~E~lA~~i~~~l~~~l~~~~~~l~~V~v~Et~~~~a~~~~e  123 (123)
T PF01242_consen   68 LNEDDPEFDDINNPTAENLARWIFERLKEKLSPPGVRLVKVEVYETPNNWAEYEGE  123 (123)
T ss_dssp             GGHHSGCGCSSTS--HHHHHHHHHHHHHHHHHHTTTTEEEEEEEEETTEEEEEEE-
T ss_pred             ccCCChhhhccCCCCHHHHHHHHHHHHHHHhcccccEEEEEEEEECCCCEEEEecC
Confidence            987889887665 999999999999999999 558889999999999999999986

Tetrahydrobiopterin is the cofactor for several aromatic amino acid monooxygenases and the nitric oxide synthases. 6-Pyruvoyl tetrahydropterin synthase (PTPS) [] is a Zn-dependent metalloprotein, transforms dihydroneopterin triphosphate into 6-pyruvoyltetrahydropterin in the presence of Mg(II) and for which the crystal structure is known. The enzyme is a homohexameric, composed of a dimer of trimers. A transition metal binding site formed by the three histidine residues 23, 48 and 50 is present in each subunit, and bound Zn(II) is responsible for the enzymatic activity. Site-directed mutagenesis of each of these three histidine residues results in a complete loss of metal binding and enzymatic activity [, ]. The function of the bacterial branch of the sequence lineage appears not to have been established.; GO: 0003874 6-pyruvoyltetrahydropterin synthase activity, 0046872 metal ion binding, 0006729 tetrahydrobiopterin biosynthetic process; PDB: 3QNA_E 3QN9_A 3QN0_B 1Y13_C 3D7J_A 3I2B_J 2OBA_D 3M0N_A 2A0S_A 3LZE_A ....

>COG0720 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]

Probab=100.00  E-value=9.7e-38  Score=226.75  Aligned_cols=121  Identities=36%  Similarity=0.566  Sum_probs=108.1

Q ss_pred             EEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCc
Q psy16342          8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDH   87 (143)
Q Consensus         8 ~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH   87 (143)
                      ++.|+++|+|+|||+|+.++          +||++  ||||||.|+|+|+|+.++..|||+||++||++++. |++.|||
T Consensus         2 ~~~i~~~f~F~AaH~l~~~~----------~kC~~--lHGHty~veV~i~ge~~d~~Gmv~DF~~lk~~~k~-i~~~~DH   68 (127)
T COG0720           2 MRGITKRFSFDAAHRLPGHP----------GKCGR--LHGHTYKVEVEIEGEELDEHGMVVDFGELKKAVKE-ILDELDH   68 (127)
T ss_pred             eEEEEEEEEEecccccCCCC----------CcccC--CcCcceEEEEEEEEeeecCCCEEEEHHHHHHHHHH-hhhccCh
Confidence            68999999999999999875          68999  89999999999999999877999999999998887 9999999


Q ss_pred             ccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCC--CceEEEEEEE--ecCCCEEEEec
Q psy16342         88 KNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKE--PELLYEVKLY--ETDKNIVLYRG  142 (143)
Q Consensus        88 ~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~--~~~l~~V~v~--Et~~~~a~y~~  142 (143)
                      ++|| +.+.+...+||+|++|+||+++++..||.  ......++.|  |||+++|+|++
T Consensus        69 ~~Ln-~~~~~~~~~pt~E~~a~~i~~~~~~~l~~~~~~s~~~~~~~~~Et~~~~~e~~~  126 (127)
T COG0720          69 KLLN-DIEEFDKENPTAENIAKWIFDRLKVVLPDEAETSAEELREYVAETPTSGAEYRK  126 (127)
T ss_pred             Hhhc-CCccccccCchHHHHHHHHHHHHHHhcCCcccccHHhhhhheecCCCceEEEee
Confidence            9999 66666557999999999999999999984  4555555555  99999999986

>TIGR03112 6_pyr_pter_rel 6-pyruvoyl tetrahydropterin synthase-related domain

Probab=100.00  E-value=2.4e-37  Score=220.63  Aligned_cols=107  Identities=21%  Similarity=0.316  Sum_probs=98.1

Q ss_pred             EEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCcccccC
Q psy16342         13 RVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDK   92 (143)
Q Consensus        13 k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH~~Ln~   92 (143)
                      .++.|+|||+++.           .|||++  +|||||+|+|+|+|+.   .|| |||++||+++++ +++.|||++|| 
T Consensus         3 ~~~~f~AaH~l~~-----------~gkc~~--lHGHty~vev~v~g~~---~g~-vDf~~lk~~l~~-v~~~~DH~~LN-   63 (113)
T TIGR03112         3 FKFYLNASHSIII-----------NGVRGN--KHPHTWEITIFVIKKE---DKF-ILFNDVEKKVEK-YLKPYQNKYLN-   63 (113)
T ss_pred             eeEEEeCeeeCCC-----------CCCcCC--cCCCcEEEEEEEEecC---CeE-EEHHHHHHHHHH-HHHcCCCceec-
Confidence            3689999999962           399999  7999999999999976   587 899999999999 99999999999 


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhcCC-CceEEEEEEEecCCCEE
Q psy16342         93 DVPYFADVVSTSENVAIFIWNNLKKIMKE-PELLYEVKLYETDKNIV  138 (143)
Q Consensus        93 d~~~f~~~~pT~E~lA~~i~~~l~~~l~~-~~~l~~V~v~Et~~~~a  138 (143)
                      ++|+|.+.+||+||||+|||++|++.|++ ++++.+|+|||||++.-
T Consensus        64 dv~~f~~~~PTaEniA~~i~~~l~~~l~~~~~~l~~V~l~Et~~~~~  110 (113)
T TIGR03112        64 DLEPFDKINPTLENIGDYFFDEIKKLLKEKGWKLHSIEISETPTRTY  110 (113)
T ss_pred             cCCccCCCCCCHHHHHHHHHHHHHHhhccCCceEEEEEEEECCCceE
Confidence            89999888999999999999999999976 78999999999998764

Members of this family are small proteins, or small domains of larger proteins, that occur in certain Firmicutes in the same regions as members of families TIGR03110 and TIGR03111. Members of TIGR03110 resemble exosortase, a proposed protein sorting transpeptidase (see TIGR02602). TIGR03111 represents a small clade among the group 2 glycosyltransferases. Members of the current protein family resemble eukaryotic known and prokaryotic predicted 6-pyruvoyl tetrahydropterin synthases.

>KOG4105|consensus

Probab=100.00  E-value=2e-37  Score=218.67  Aligned_cols=140  Identities=56%  Similarity=0.914  Sum_probs=134.3

Q ss_pred             CCCcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhc
Q psy16342          4 SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMV   83 (143)
Q Consensus         4 ~~~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~   83 (143)
                      +++|...++++..|+|||||..+.|||++|.+.||||.+++.|||||.|.|+|+|+.++..|||+|..+||+.+...|..
T Consensus         2 s~~p~a~~~Rr~sFSA~HRLhS~~LSDaENle~FGKCNN~nGHGHNY~v~vtvrGeiDp~tGMV~nla~LKk~me~vim~   81 (141)
T KOG4105|consen    2 SRMPIATMERRDSFSAAHRLHSEKLSDAENLETFGKCNNSNGHGHNYVVKVTVRGEIDPTTGMVYNLAKLKKEMELVIMT   81 (141)
T ss_pred             CcCCceeeeeehhhhHHHhhcccccCchhhhHHhhccCCCCCCCcceEEEEEEecccCCccceeEEHHHHHHHHHHHHhc
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999998999


Q ss_pred             cCCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         84 PMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        84 ~lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      +|||+.|..|+|+|.....|+||+|.|||+.|+..|+.+--+.+|.|.|||.+-.+|+|+
T Consensus        82 ~ldhknld~dv~yfa~tvSTtENvAvYiwdnl~~vl~~p~vLYkVki~ETpkNI~~YkG~  141 (141)
T KOG4105|consen   82 RLDHKNLDKDVEYFATTVSTTENVAVYIWDNLKSVLSNPSVLYKVKIEETPKNIFTYKGC  141 (141)
T ss_pred             ccccccccccchhhcccccccccEEeeehhhHHhhcCCCceEEEEEEEeCCCceEEecCC
Confidence            999999999999999999999999999999999999876559999999999999999985

>TIGR03367 queuosine_QueD queuosine biosynthesis protein QueD

Probab=100.00  E-value=5.2e-35  Score=201.61  Aligned_cols=92  Identities=42%  Similarity=0.691  Sum_probs=85.7

Q ss_pred             EEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCccc
Q psy16342         10 YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKN   89 (143)
Q Consensus        10 ~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH~~   89 (143)
                      +|+|+++|+|||++++++          |+|++  +|||||+|+|+|+|+.++..|||+||++||+++++ |++.|||++
T Consensus         1 ~i~~~~~f~aaH~l~~~~----------g~c~~--lHGH~y~v~v~~~~~~l~~~g~v~Df~~lk~~~~~-i~~~lDh~~   67 (92)
T TIGR03367         1 EITKEFTFDAAHRLPGYP----------GKCAN--LHGHTYKVEVTVSGEVLDEAGMVMDFSDLKAIVKE-VVDRLDHAL   67 (92)
T ss_pred             CEEEEEEEEeeeEcCCCC----------CCccC--cCCccEEEEEEEEEeecCCccEEEEHHHHHHHHHH-HHHhCCCcE
Confidence            489999999999999864          89999  79999999999999998889999999999999998 999999999


Q ss_pred             ccCcCCCCCCCCCCHHHHHHHHHHHHHh
Q psy16342         90 LDKDVPYFADVVSTSENVAIFIWNNLKK  117 (143)
Q Consensus        90 Ln~d~~~f~~~~pT~E~lA~~i~~~l~~  117 (143)
                      || ++|.|.  +||+|+||+|||++|++
T Consensus        68 Ln-e~~~~~--~pT~E~ia~~i~~~l~~   92 (92)
T TIGR03367        68 LN-DVPGLE--NPTAENLARWIYDRLKA   92 (92)
T ss_pred             ee-CCCCCC--CCCHHHHHHHHHHHHhC
Confidence            99 888875  99999999999999864

Members of this protein family, closely related to eukaryotic 6-pyruvoyl tetrahydrobiopterin synthase enzymes, are the QueD protein of queuosine biosynthesis. Queuosine is a hypermodified base in the wobble position of tRNAs for Tyr, His, Asp, and Asn in many species. This modification, although widespread, appears not to be important for viability. The queuosine precursor made by this enzyme may be converted instead to archeaosine as in some Archaea.

>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]

Probab=87.00  E-value=9.2  Score=27.40  Aligned_cols=92  Identities=20%  Similarity=0.160  Sum_probs=63.3

Q ss_pred             EEEEEEE-EEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhh
Q psy16342          8 IGYLTRV-EKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAI   81 (143)
Q Consensus         8 ~~~i~k~-~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i   81 (143)
                      |.+|..+ +.|.+=|=+...              ++  .=|-.+.|.+++.-+.     .|+..-.+|++++-+.+++++
T Consensus         2 md~v~i~~l~~~~~iGv~~~--------------E~--~~~Q~~~Vdl~l~~d~~~A~~~Ddl~dtl~Y~~v~~~i~~~v   65 (121)
T COG1539           2 MDRVFIENLEFFAYIGVLDE--------------ER--KLGQKFVVDLTLGYDLRKAAESDDLADTLNYAEVSELIKEIV   65 (121)
T ss_pred             ccEEEEcceEEEEEEcCCHH--------------Hh--ccCCeEEEEEEEeccchhhcCccchhheecHHHHHHHHHHHH
Confidence            3444444 778777755321              22  4677889999988654     244778999999999999855


Q ss_pred             hccCCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEE
Q psy16342         82 MVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLY  131 (143)
Q Consensus        82 ~~~lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~  131 (143)
                      ...          + |    -..|.+|..|.+.+....+ .+...+|+|.
T Consensus        66 ~~~----------~-~----~LiE~lA~~ia~~l~~~~~-~v~~~~v~v~   99 (121)
T COG1539          66 EGK----------R-F----ALIETLAEEIADLLLARFP-RVELVEVKVT   99 (121)
T ss_pred             hCC----------c-c----chHHHHHHHHHHHHHhhCC-ccEEEEEEEE
Confidence            332          1 1    3589999999999999886 3556666664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
3i2b_A	141	The Crystal Structure Of Human 6 Pyruvoyl Tetrahydr		8e-43
1gtq_A	140	6-Pyruvoyl Tetrahydropterin Synthase Length = 140		2e-42
2g64_A	140	Structure Of Caenorhabditis Elegans 6-Pyruvoyl Tetr		2e-35
2oba_A	138	Pseudomonas Aeruginosa 6-Pyruvoyl Tetrahydrobiopter		6e-08
3qn0_A	141	Structure Of 6-Pyruvoyltetrahydropterin Synthase Le		1e-06
3qna_A	141	Crystal Structure Of A 6-Pyruvoyltetrahydropterin S		1e-05

>pdb|3I2B|A Chain A, The Crystal Structure Of Human 6 Pyruvoyl Tetrahydrobiopterin Synthase Length = 141

Iteration: 1
 Score =  168 bits (426), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 11  LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
           ++R   FSA HRL+S  L+DEEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+
Sbjct: 10  VSRRISFSASHRLYSKFLSDEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPATGMVMNL 69
Query: 71  NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
            DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++    +LY+VK+
Sbjct: 70  ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLP-VGVLYKVKV 128
Query: 131 YETDKNIVLYRGE 143
           YETD NIV+Y+GE
Sbjct: 129 YETDNNIVVYKGE 141

>pdb|1GTQ|A Chain A, 6-Pyruvoyl Tetrahydropterin Synthase Length = 140

Iteration: 1
 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/127 (63%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 17  FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
           FSA HRLHSP L+ EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N+ DLK Y
Sbjct: 15  FSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEY 74
Query: 77  MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
           M +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++     LY+VK+YETD N
Sbjct: 75  MEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGA-LYKVKVYETDNN 133
Query: 137 IVLYRGE 143
           IV+Y+GE
Sbjct: 134 IVVYKGE 140

>pdb|2G64|A Chain A, Structure Of Caenorhabditis Elegans 6-Pyruvoyl Tetrahydropterin Synthase Length = 140

Iteration: 1
 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 5   KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
           ++PI  + RV+ FSA HRLHS  L+D ENK T+GKCNN +GHGHNY  +V L+G +    
Sbjct: 3   RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTS 62
Query: 65  GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
           GMV ++  LK  M   ++  +DH+NLDKDV +F   VSTSENVAI+++  LK +M  P +
Sbjct: 63  GMVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSV 121
Query: 125 LYEVKLYETDKNIVLYRG 142
           LY+V + ET KNI  Y+G
Sbjct: 122 LYKVTIEETPKNIFTYKG 139

>pdb|2OBA|A Chain A, Pseudomonas Aeruginosa 6-Pyruvoyl Tetrahydrobiopterin Synthase Length = 138

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 17/127 (13%)
Query: 17  FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
           F + HRL  PH+ +        KC   HGH  ++ V + ++G +    G + +  ++K  
Sbjct: 29  FESAHRL--PHVPEGH------KCGRLHGH--SFRVAIHIEGEVDPHTGWIRDFAEIKA- 77
Query: 77  MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
           +   I   +DH  L+ D+P   +   TSEN+  +IW  LK ++ E   L +V+++ET  +
Sbjct: 78  IFKPIYEQLDHNYLN-DIPGLEN--PTSENLCRWIWQQLKPLLPE---LSKVRVHETCTS 131
Query: 137 IVLYRGE 143
              YRG+
Sbjct: 132 GCEYRGD 138

>pdb|3QN0|A Chain A, Structure Of 6-Pyruvoyltetrahydropterin Synthase Length = 141

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 17  FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
           F A HRL  PH+ +        KC   HGH  ++ V + + G +    G +++  +LK  
Sbjct: 32  FEAAHRL--PHVPEGH------KCGRLHGH--SFMVRLEITGEVDPHTGWIIDFAELKAA 81
Query: 77  MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
                   +DH  L+ D+P   +   TSE +A +IW+ +K ++    LL  V + ET   
Sbjct: 82  F-KPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 134
Query: 137 IVLYRGE 143
             +YRGE
Sbjct: 135 GCIYRGE 141

>pdb|3QNA|A Chain A, Crystal Structure Of A 6-Pyruvoyltetrahydropterin Synthase Homologue From Esherichia Coli Complexed Sepiapterin Length = 141

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 17  FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
           F A HRL  PH+ +       G+      HGH++ V + + G +    G +++  +LK  
Sbjct: 32  FEAAHRL--PHVPEGHKA---GRL-----HGHSFMVRLEITGEVDPHTGWIIDFAELKAA 81
Query: 77  MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
                   +DH  L+ D+P   +   TSE +A +IW+ +K ++    LL  V + ET   
Sbjct: 82  F-KPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 134
Query: 137 IVLYRGE 143
             +YRGE
Sbjct: 135 GCIYRGE 141

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
1b66_A	140	6-pyruvoyl tetrahydropterin synthase; tetrahydrobi	5e-51
2g64_A	140	Putative 6-pyruvoyl tetrahydrobiopterin synthase;	7e-51
3d7j_A	152	Uncharacterized protein SCO6650; T-fold, unknown f	4e-35
2oba_A	138	Probable 6-pyruvoyl tetrahydrobiopterin synthase;	2e-34
2dj6_A	115	Hypothetical protein PH0634; 6-pyruvoyl tetrahydro	5e-33
3jyg_A	188	Uncharacterized protein; structural genomics, unkn	1e-27
3lx3_A	180	6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP	8e-17
1y13_A	181	PTPS, 6-pyruvoyl tetrahydropterin synthase; struct	8e-16

>1b66_A 6-pyruvoyl tetrahydropterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, PTE synthesis; HET: BIO; 1.90A {Rattus rattus} SCOP: d.96.1.2 PDB: 1b6z_A 1gtq_A 3i2b_A Length = 140

 Score =  158 bits (400), Expect = 5e-51
 Identities = 83/134 (61%), Positives = 104/134 (77%), Gaps = 1/134 (0%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            L+R+  FSA HRLHSP L+ EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N
Sbjct: 8   RLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMN 67

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVK 129
           + DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++     LY+VK
Sbjct: 68  LTDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGA-LYKVK 126

Query: 130 LYETDKNIVLYRGE 143
           +YETD NIV+Y+GE
Sbjct: 127 VYETDNNIVVYKGE 140

>2g64_A Putative 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, PTE synthesis; 1.80A {Caenorhabditis elegans} SCOP: d.96.1.2 Length = 140

 Score =  157 bits (399), Expect = 7e-51
 Identities = 69/139 (49%), Positives = 95/139 (68%), Gaps = 1/139 (0%)

Query: 4   SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
            ++PI  + RV+ FSA HRLHS  L+D ENK T+GKCNN +GHGHNY  +V L+G +   
Sbjct: 2   FRMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPT 61

Query: 64  RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
            GMV ++  LK   +  ++  +DH+NLDKDV +F   VSTSENVAI+++  LK +M  P 
Sbjct: 62  SGMVYDLAKLK-KEMSLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPS 120

Query: 124 LLYEVKLYETDKNIVLYRG 142
           +LY+V + ET KNI  Y+G
Sbjct: 121 VLYKVTIEETPKNIFTYKG 139

>3d7j_A Uncharacterized protein SCO6650; T-fold, unknown function; 1.45A {Streptomyces coelicolor} Length = 152

 Score =  118 bits (296), Expect = 4e-35
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 21/142 (14%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            +T  +     H               +G     HG    + V+ T +     E  +V++
Sbjct: 23  SITVRDHIMIAHSFRGDV---------FGPAQRLHGA--TFLVDATFRREQLDEDNIVVD 71

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL----- 124
           I       + A++  ++++NLD + P FA V +++E +A  I + L + + +  L     
Sbjct: 72  IGLATQ-ELGAVVGALNYRNLD-NEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGAR 129

Query: 125 ---LYEVKLYETDKNIVLYRGE 143
                 V L+E+      Y   
Sbjct: 130 GLAGLTVTLHESHVAWASYERA 151

>2oba_A Probable 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, PTP synthase, PTPS, lyase; 2.33A {Pseudomonas aeruginosa} PDB: 3qn0_A 3qn9_A 3qna_A* Length = 138

 Score =  116 bits (292), Expect = 2e-34
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 17/134 (12%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            L +   F + HRL         +     KC   HGH  ++ V + ++G +    G + +
Sbjct: 22  ELFKEFTFESAHRLP--------HVPEGHKCGRLHGH--SFRVAIHIEGEVDPHTGWIRD 71

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVK 129
             ++K  +   I   +DH  L+ D+P   +   TSEN+  +IW  LK ++ E   L +V+
Sbjct: 72  FAEIKA-IFKPIYEQLDHNYLN-DIPGLEN--PTSENLCRWIWQQLKPLLPE---LSKVR 124

Query: 130 LYETDKNIVLYRGE 143
           ++ET  +   YRG+
Sbjct: 125 VHETCTSGCEYRGD 138

>2dj6_A Hypothetical protein PH0634; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS), structural G NPPSFA; 2.10A {Pyrococcus horikoshii} PDB: 2dtt_A* Length = 115

 Score =  111 bits (280), Expect = 5e-33
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 21/131 (16%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            +     F A H +                  + HGH   + +EV ++G I  + G V++
Sbjct: 4   RIIVRTSFDAAHAVKV-----------GDHWEDVHGH--TFFLEVAIEGEI--KNGYVMD 48

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVK 129
             +L+  +V+ I   +DH+NL+           T+EN+A++I   ++  +     L  V 
Sbjct: 49  FLELRK-IVEEITKELDHRNLNNIFEN-----PTTENIALWIGERIRDKLPPYVKLKRVV 102

Query: 130 LYETDKNIVLY 140
           L+E   N V  
Sbjct: 103 LWEGKDNGVEL 113

>3jyg_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; 1.95A {Wolinella succinogenes} Length = 188

 Score =  100 bits (249), Expect = 1e-27
 Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 50/180 (27%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            + +   F   HR+ S  L  + +      C + HGH     V V L+     +RGMV +
Sbjct: 6   QIAKEFDFCYGHRVWSQELNPDFSLDPCLSCRHLHGH--QGKVIVHLESR-ELQRGMVTD 62

Query: 70  INDLKVYMVDAIMVPMDHKNL-DKDVPYFA------------------------------ 98
              L  +    I   +DH+ + D D P F                               
Sbjct: 63  FAHLN-WFKRFIDEVLDHRFIIDIDDPLFPTLLPHFADKSALVWMEEGYARVDFERIKGE 121

Query: 99  --------------DVVSTSENVAIFIWNNLKKIMKEPEL-LYEVKLYETDKNIVLYRGE 143
                           V TSE++A ++   L+  ++   + +  V+  ET K+      E
Sbjct: 122 SSPILELYESFVVVRFVPTSESIASWLLELLRSRIQPLGVKVSSVEFLETPKSRARVYNE 181

>3lx3_A 6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP synthase, PTPS, metal-binding, tetrahydrobiopterin biosynthesis, folate biosynthesis; HET: XTN; 1.55A {Plasmodium vivax} PDB: 2a0s_A* 3m0n_A* 3lze_A* Length = 180

 Score = 71.9 bits (176), Expect = 8e-17
 Identities = 30/164 (18%), Positives = 50/164 (30%), Gaps = 51/164 (31%)

Query: 16  KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
            F+  H +              G     HGH  NY V + L+G I    G V++ + LK 
Sbjct: 31  SFNCAHFIAF-----------KGFRETLHGH--NYNVSLRLRGNIQ-GDGYVIDFSILKE 76

Query: 76  YMVDAIMVPMDHKNL------------------------------DKDVPYFADVVSTSE 105
             V  +   +DH  +                               +D        S++E
Sbjct: 77  K-VRKVCKQLDHHFILPMYSDVLNIQEVNDNFKITCEDNSEYSFPKRDCVQIPIKHSSTE 135

Query: 106 NVAIFIWNNLKKIMKEPEL------LYEVKLYETDKNIVLYRGE 143
            + ++I N L + +  P L        EV + E+          
Sbjct: 136 EIGLYILNQLIEEIDLPFLKTRSVNYMEVTVSESPSQKATVHRN 179

>1y13_A PTPS, 6-pyruvoyl tetrahydropterin synthase; structural genomics of pathogenic protozoa consortium, SGPP, structural genomics, PSI; HET: BIO; 2.20A {Plasmodium falciparum} SCOP: d.96.1.2 Length = 181

 Score = 69.2 bits (169), Expect = 8e-16
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 15/125 (12%)

Query: 16  KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
            F+  H +              G     HGH  NY V + ++G +  + G V++ + LK 
Sbjct: 32  SFNCAHFIAYN-----------GFRETLHGH--NYNVSLKVRGYVR-DDGYVIDFSILKE 77

Query: 76  YMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
             V  +   +DH  +           +   N+ I   +N +    E + +     + + +
Sbjct: 78  K-VKKVCNKLDHHFILPIYSDVLKFENVKNNIKIICEDNSEYSFPERDCIKLPIKHSSTE 136

Query: 136 NIVLY 140
            I  Y
Sbjct: 137 EIGQY 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
1b66_A	140	6-pyruvoyl tetrahydropterin synthase; tetrahydrobi	100.0
2g64_A	140	Putative 6-pyruvoyl tetrahydrobiopterin synthase;	100.0
3d7j_A	152	Uncharacterized protein SCO6650; T-fold, unknown f	100.0
3jyg_A	188	Uncharacterized protein; structural genomics, unkn	100.0
2oba_A	138	Probable 6-pyruvoyl tetrahydrobiopterin synthase;	100.0
2dj6_A	115	Hypothetical protein PH0634; 6-pyruvoyl tetrahydro	100.0
1y13_A	181	PTPS, 6-pyruvoyl tetrahydropterin synthase; struct	100.0
3lx3_A	180	6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP	100.0
3o1k_A	132	Dihydroneopterin aldolase FOLB, putative; structur	90.37
1sql_A	146	Dihydroneopterin aldolase; tetrahydrofolate biosyn	87.6
3v9o_A	143	Dihydroneopterin aldolase; structural genomics, se	87.52
3r2e_A	143	Dihydroneopterin aldolase; structural genomics, ID	83.55
1z9w_A	133	DHNA, dihydroneopterin aldolase; FOLB, structural	82.57
1nbu_A	119	DHNA, probable dihydroneopterin aldolase; anti-par	81.22
2cg8_A	270	Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dih	80.13

>1b66_A 6-pyruvoyl tetrahydropterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, PTE synthesis; HET: BIO; 1.90A {Rattus rattus} SCOP: d.96.1.2 PDB: 1b6z_A 1gtq_A 3i2b_A

Probab=100.00  E-value=6.4e-50  Score=293.82  Aligned_cols=139  Identities=60%  Similarity=0.988  Sum_probs=131.1

Q ss_pred             CCCcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhc
Q psy16342          4 SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMV   83 (143)
Q Consensus         4 ~~~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~   83 (143)
                      |+++|++|+|+++|+|||+|++++||+++|+.++|||++++.|||||+|+|+|+|+.++..|||+||++||++++++|++
T Consensus         2 ~~~~~~~i~~~~~F~AAH~l~~~~~s~~~n~~~~gkC~~l~~HGH~y~v~V~v~g~~d~~~GmV~Df~~lK~~i~~~i~~   81 (140)
T 1b66_A            2 GLRRRARLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEYMEEAIMK   81 (140)
T ss_dssp             -CCCEEEEEEEEEEEEEECCCCTTSCHHHHHHHHGGGGCTTCEEEEEEEEEEEEEECCTTTCCSSCHHHHHHHHHHHTHH
T ss_pred             CCCCEEEEEEEEEEEeeeEcCCCcCChhhccccCCcccCCCCcCccEEEEEEEEeccCCCCCEEEEHHHHHHHHHHHHhh
Confidence            78889999999999999999999999999999999999933399999999999999887899999999999999988999


Q ss_pred             cCCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         84 PMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        84 ~lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      .|||++||+|+|.|+..+||+|+||+|||++|++.||+ +++.+|+|||||+++|+|+++
T Consensus        82 ~lDH~~Ln~dvp~f~~~~pTaEnlA~~i~~~l~~~l~~-~~l~~V~v~Et~~~~a~y~~~  140 (140)
T 1b66_A           82 PLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPV-GALYKVKVYETDNNIVVYKGE  140 (140)
T ss_dssp             HHTTEEHHHHCGGGTSSCCCHHHHHHHHHHHHHHHSCT-TCEEEEEEEEETTEEEEECCC
T ss_pred             cCCCCcccccCcccCCCCCCHHHHHHHHHHHHHHhcCC-CeEEEEEEEeCCCCEEEEecC
Confidence            99999999889999889999999999999999999995 789999999999999999985

>2g64_A Putative 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, phosphate elimination, PTE synthesis; 1.80A {Caenorhabditis elegans} SCOP: d.96.1.2

Probab=100.00  E-value=1.8e-48  Score=286.00  Aligned_cols=137  Identities=51%  Similarity=0.867  Sum_probs=130.0

Q ss_pred             CcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccC
Q psy16342          6 VPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPM   85 (143)
Q Consensus         6 ~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~l   85 (143)
                      |+|++|+|+++|+|||+|++++||+++|+.++|+|+++++|||||+|+|+|+|+.+++.|||+||++||++++ +|++.|
T Consensus         4 m~~~~i~~~~~F~aaH~L~~~~~s~~~n~~~~gkC~~l~~HGH~y~v~V~v~g~~d~~~Gmv~Df~~lk~~~~-~i~~~l   82 (140)
T 2g64_A            4 MPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKLKKEMS-LVLDTV   82 (140)
T ss_dssp             CCEEEEEEEEEEEEEECCCCTTSCHHHHHHHHGGGGCTTCEEEEEEEEEEEEEECCTTTCCSSCHHHHHHHHH-HHHHTT
T ss_pred             CcEEEEEEEEEEEeeeecCCCCcChhhccccCCccCCcCCcCccEEEEEEEEeccCCCCCEEEEHHHHHHHHH-HHHhcC
Confidence            6789999999999999999999999999999999999444999999999999998767999999999999999 499999


Q ss_pred             CcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         86 DHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        86 DH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ||++||.++|+|.+.+||+|+||+|||++|++.||+++++.+|+|||||+++|+|+++
T Consensus        83 DH~~Ln~dv~~f~~~~pT~EnlA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  140 (140)
T 2g64_A           83 DHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKGS  140 (140)
T ss_dssp             TTEEHHHHCGGGGTSCCCHHHHHHHHHHHHHHHCSSGGGEEEEEEEEETTEEEEECCC
T ss_pred             CCcccchhhcccCCCCCCHHHHHHHHHHHHHHhcccCceEEEEEEEECCCCEEEEecC
Confidence            9999998899998899999999999999999999987889999999999999999985

>3d7j_A Uncharacterized protein SCO6650; T-fold, unknown function; 1.45A {Streptomyces coelicolor}

Probab=100.00  E-value=1.4e-45  Score=274.01  Aligned_cols=125  Identities=20%  Similarity=0.259  Sum_probs=116.6

Q ss_pred             CcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccC
Q psy16342          6 VPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPM   85 (143)
Q Consensus         6 ~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~l   85 (143)
                      .+|++|+|+++|+|||+|+++.         +|||++  +|||||+|+|+|+|+.+++.|||+||++||+++++ |++.|
T Consensus        19 ~~m~~i~k~~~F~AAH~L~~~~---------~gkC~~--lHGH~y~V~V~v~g~~l~~~GmVvDF~~lK~~ik~-i~~~l   86 (152)
T 3d7j_A           19 SHMFSITVRDHIMIAHSFRGDV---------FGPAQR--LHGATFLVDATFRREQLDEDNIVVDIGLATQELGA-VVGAL   86 (152)
T ss_dssp             CEEEEEEEEEEEEEEECCCSGG---------GGGGGS--SEEEEEEEEEEEEESSCCTTSSSSCHHHHHHHHHH-HHHTT
T ss_pred             ceEEEEEEEEEEEeeeecCCCC---------CCcccC--cCCCcEEEEEEEEecccCCCCEEEEHHHHHHHHHH-HHHhc
Confidence            5689999999999999998852         599999  79999999999999988889999999999999999 99999


Q ss_pred             CcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcC--------CCceEEEEEEEecCCCEEEEecC
Q psy16342         86 DHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMK--------EPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        86 DH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~--------~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ||++|| ++|.|+..|||+||||+|||++|++.||        .++++.+|+|||||+++|+|+++
T Consensus        87 DH~~Ln-~~p~f~~~npTaEnlA~~i~~~L~~~L~~~~~~~~~~~v~l~~V~v~ET~~~~a~Y~~~  151 (152)
T 3d7j_A           87 NYRNLD-NEPDFAGVNTSTEFLAKVIADRLAERVHKGALGEGARGLAGLTVTLHESHVAWASYERA  151 (152)
T ss_dssp             TTEEGG-GCGGGTTSCCCHHHHHHHHHHHHHHHHHTTTTCGGGGGCCEEEEEEECSSSEEEEEEEE
T ss_pred             CCcccc-cccccCCCCCCHHHHHHHHHHHHHHhccccccccccCCeEEEEEEEEECCCcEEEEecc
Confidence            999999 8899988899999999999999999998        35789999999999999999974

>3jyg_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; 1.95A {Wolinella succinogenes}

Probab=100.00  E-value=5.5e-44  Score=273.50  Aligned_cols=132  Identities=27%  Similarity=0.328  Sum_probs=122.1

Q ss_pred             EEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCc
Q psy16342          8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDH   87 (143)
Q Consensus         8 ~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH   87 (143)
                      ||+|+|+++|+|||+|+++.||+++|..++|||++  +|||||+|+|+|+|+.++ .|||+||++|| +++++|++.|||
T Consensus         4 m~~i~k~~~F~AAH~L~~~~~s~~~n~~~~gkC~~--lHGHny~v~V~v~g~~~~-~GmV~Df~~lk-~i~~~i~~~lDH   79 (188)
T 3jyg_A            4 IYQIAKEFDFCYGHRVWSQELNPDFSLDPCLSCRH--LHGHQGKVIVHLESRELQ-RGMVTDFAHLN-WFKRFIDEVLDH   79 (188)
T ss_dssp             EEEEEEEEEEEEEECCTTCCCCHHHHSCCCCGGGS--SEEEEEEEEEEEEESSCB-TTBSSCGGGGH-HHHHHHHHHTTT
T ss_pred             EEEEEEEEEEEeeeEcCCcccchhhccCCCCcccC--ccCCcEEEEEEEEeccCC-CCeEEEHHHHH-HHHHHHhhhCCc
Confidence            79999999999999999999999999999999999  799999999999999998 99999999999 999989999999


Q ss_pred             ccccC--c------CCCC-------------------------------------CCCCCCHHHHHHHHHHHHHhhcCC-
Q psy16342         88 KNLDK--D------VPYF-------------------------------------ADVVSTSENVAIFIWNNLKKIMKE-  121 (143)
Q Consensus        88 ~~Ln~--d------~~~f-------------------------------------~~~~pT~E~lA~~i~~~l~~~l~~-  121 (143)
                      ++||.  |      +|.|                                     .+.+||+||||+|||++|++.|+. 
T Consensus        80 ~~Ln~~~Dp~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~vv~~~~nPTaEnlA~~i~~~L~~~L~~~  159 (188)
T 3jyg_A           80 RFIIDIDDPLFPTLLPHFADKSALVWMEEGYARVDFERIKGESSPILELYESFVVVRFVPTSESIASWLLELLRSRIQPL  159 (188)
T ss_dssp             EEEEETTCTTHHHHSGGGTTSCSEEECTTSEEEECGGGGTTCCHHHHHHHHHEEEESSCCCHHHHHHHHHHHHHHHCGGG
T ss_pred             cccCCCCChhhhhhhhhhcccccccccccccccccccccccccccccccccceeccCCCcCHHHHHHHHHHHHHHhhccc
Confidence            99983  2      4444                                     147999999999999999999954 


Q ss_pred             CceEEEEEEEecCCCEEEEecC
Q psy16342        122 PELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus       122 ~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ++++.+|+|||||+++|+|+.+
T Consensus       160 ~v~l~~V~v~ETp~~~a~~~~~  181 (188)
T 3jyg_A          160 GVKVSSVEFLETPKSRARVYNE  181 (188)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEEECCCcEEEEeCC
Confidence            8999999999999999999854

>2oba_A Probable 6-pyruvoyl tetrahydrobiopterin synthase; tetrahydrobiopterin biosynthesis, PTP synthase, PTPS, lyase; 2.33A {Pseudomonas aeruginosa} PDB: 3qn0_A 3qn9_A 3qna_A*

Probab=100.00  E-value=1.3e-42  Score=254.35  Aligned_cols=121  Identities=30%  Similarity=0.500  Sum_probs=110.9

Q ss_pred             CcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccC
Q psy16342          6 VPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPM   85 (143)
Q Consensus         6 ~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~l   85 (143)
                      ..|++|+|++.|+|||+|++.+        +.|+|++  ||||||+|+|+|+|+.+++.|||+||++||+++++ +++.|
T Consensus        18 ~~~~~i~k~~~F~aAH~L~~~~--------~~gkC~~--lHGH~y~v~V~v~g~~~~~~GmV~Df~~lk~~~~~-vi~~l   86 (138)
T 2oba_A           18 GSHMELFKEFTFESAHRLPHVP--------EGHKCGR--LHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKP-IYEQL   86 (138)
T ss_dssp             -CCEEEEEEEEEEEEECCSSSC--------TTCGGGS--SEEEEEEEEEEEEECCCTTTSSSSCHHHHHHHHHH-HHHHH
T ss_pred             ceEEEEEEEEEEEeEeecCCCC--------CCCcccC--ccCCcEEEEEEEEeccCCCCCEEEeHHHHHHHHHH-HHHhC
Confidence            4579999999999999998721        2499999  79999999999999999889999999999999999 77999


Q ss_pred             CcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         86 DHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        86 DH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      ||++|| ++|.|  .|||+||||+|||++|++.||.   +.+|+|||||+++|+|+++
T Consensus        87 DH~~Ln-dv~~~--~~pTaEnlA~~i~~~L~~~lp~---l~~V~v~Et~~~~a~y~~~  138 (138)
T 2oba_A           87 DHNYLN-DIPGL--ENPTSENLCRWIWQQLKPLLPE---LSKVRVHETCTSGCEYRGD  138 (138)
T ss_dssp             TTSBGG-GSTTC--SSCCHHHHHHHHHHHHGGGCTT---EEEEEEESSTTEEEEECCC
T ss_pred             CCccch-hcCCC--CCCCHHHHHHHHHHHHHHhCCC---eEEEEEEECCCCEEEEecC
Confidence            999999 88876  3999999999999999999996   8999999999999999986

>2dj6_A Hypothetical protein PH0634; 6-pyruvoyl tetrahydrobiopterin synthase (PTPS), structural G NPPSFA; 2.10A {Pyrococcus horikoshii} PDB: 2dtt_A*

Probab=100.00  E-value=8.3e-42  Score=242.93  Aligned_cols=113  Identities=27%  Similarity=0.432  Sum_probs=97.7

Q ss_pred             EEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCc
Q psy16342          8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDH   87 (143)
Q Consensus         8 ~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH   87 (143)
                      |++|+++++|+|||+|++           +|+|++  +|||||.|+|+|+| .+++ |||+||++||+.+++ |++.|||
T Consensus         2 ~~~i~~~~~F~aaH~l~~-----------~g~C~~--lHGH~y~v~v~v~g-~ld~-gmv~Df~~lk~~~~~-i~~~lDH   65 (115)
T 2dj6_A            2 KSRIIVRTSFDAAHAVKV-----------GDHWED--VHGHTFFLEVAIEG-EIKN-GYVMDFLELRKIVEE-ITKELDH   65 (115)
T ss_dssp             EEEEEEEEEEEEBCC-----------------------CCEEEEEEEEEEC-CCBT-TBSSCHHHHHHHHHH-HHTTTTT
T ss_pred             EEEEEEEEEEEeeccCCC-----------CCCccC--cCCCCEEEEEEEEe-ccCC-CceeeHHHHHHHHHH-HHHcCCC
Confidence            799999999999999986           399999  79999999999999 5555 999999999999999 9999999


Q ss_pred             ccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEe
Q psy16342         88 KNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYR  141 (143)
Q Consensus        88 ~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~  141 (143)
                      ++|| ++  |  .|||+|+||+||+++|++.||.++++.+|+|||||+++|+|+
T Consensus        66 ~~Ln-~v--~--~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~  114 (115)
T 2dj6_A           66 RNLN-NI--F--ENPTTENIALWIGERIRDKLPPYVKLKRVVLWEGKDNGVELE  114 (115)
T ss_dssp             SBHH-HH--C--SSCCHHHHHHHHHHHHHHHCCTTCEEEEEEEEESSSEEEEEE
T ss_pred             cchh-he--E--CCCCHHHHHHHHHHHHHHhccCCceEEEEEEEECCCCEEEEe
Confidence            9999 66  4  699999999999999999999889999999999999999997

>1y13_A PTPS, 6-pyruvoyl tetrahydropterin synthase; structural genomics of pathogenic protozoa consortium, SGPP, structural genomics, PSI; HET: BIO; 2.20A {Plasmodium falciparum} SCOP: d.96.1.2

Probab=100.00  E-value=1.2e-39  Score=247.84  Aligned_cols=124  Identities=22%  Similarity=0.291  Sum_probs=108.5

Q ss_pred             CCCcEEEEEE---EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhh
Q psy16342          4 SKVPIGYLTR---VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDA   80 (143)
Q Consensus         4 ~~~~~~~i~k---~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~   80 (143)
                      +.+++|+|++   +++|+|||++++           .|+|++  ||||||+|+|+|+|+.+ +.|||+||++||+++++ 
T Consensus        17 ~~~~~~~i~v~~~~~~F~aAH~l~~-----------~gkC~~--lHGH~y~V~V~v~G~~~-~~GmV~DF~~lK~~ik~-   81 (181)
T 1y13_A           17 SDNSSAEVSVESPSFSFNCAHFIAY-----------NGFRET--LHGHNYNVSLKVRGYVR-DDGYVIDFSILKEKVKK-   81 (181)
T ss_dssp             --CCEEEEEEEEEEEEEEEEECCEE-----------TTEECC--CEEEEEEEEEEEEEECC-TTSCSSCHHHHHHHHHH-
T ss_pred             cCCcEEEEEEEeeEEEEeccccCCC-----------CCCccC--cCCCCEEEEEEEEeccC-CCCEEEEHHHHHHHHHH-
Confidence            3466899988   899999999975           389999  79999999999999998 69999999999999999 


Q ss_pred             hhccCCccccc---CcC---------------------------CCCCCCCCCHHHHHHHHHHHHHhhcCC------Cce
Q psy16342         81 IMVPMDHKNLD---KDV---------------------------PYFADVVSTSENVAIFIWNNLKKIMKE------PEL  124 (143)
Q Consensus        81 i~~~lDH~~Ln---~d~---------------------------~~f~~~~pT~E~lA~~i~~~l~~~l~~------~~~  124 (143)
                      |++.|||++|+   +++                           +.|...|||+|+||+||+++|++.||.      +++
T Consensus        82 i~~~lDH~~L~~~~~d~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~pTaEnlA~~i~~~L~~~L~~~~l~~~~v~  161 (181)
T 1y13_A           82 VCNKLDHHFILPIYSDVLKFENVKNNIKIICEDNSEYSFPERDCIKLPIKHSSTEEIGQYILNQLIEEMDVSLLKSRHIH  161 (181)
T ss_dssp             HHHHHSSSEEEETTCSSEEEEEETTEEEEEETTSCEEEEEGGGEEEESCSSCCHHHHHHHHHHHHHHHHCHHHHHHTTCC
T ss_pred             HHHhCChhhhCCCCCchhhhhhccccceeeeccCceeccccccEeECCCCCCCHHHHHHHHHHHHHHhccccccccCCeE
Confidence            99999999993   121                           223346999999999999999999873      788


Q ss_pred             EEEEEEEecCCCEEEEec
Q psy16342        125 LYEVKLYETDKNIVLYRG  142 (143)
Q Consensus       125 l~~V~v~Et~~~~a~y~~  142 (143)
                      +++|+|||||+++|+|++
T Consensus       162 ~~~V~v~Et~~~~A~y~~  179 (181)
T 1y13_A          162 YIEISVSESPTQKAIVHK  179 (181)
T ss_dssp             EEEEEEEEETTEEEEEEE
T ss_pred             EEEEEEEeCCCCEEEEEE
Confidence            999999999999999986

>3lx3_A 6-pyruvoyl tetrahydrobiopterin synthase; PTS, PTP synthase, PTPS, metal-binding, tetrahydrobiopterin biosynthesis, folate biosynthesis; HET: XTN; 1.55A {Plasmodium vivax} SCOP: d.96.1.2 PDB: 2a0s_A* 3m0n_A* 3lze_A*

Probab=100.00  E-value=1.3e-38  Score=242.19  Aligned_cols=123  Identities=24%  Similarity=0.311  Sum_probs=105.8

Q ss_pred             CcEEEEE---EEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhh
Q psy16342          6 VPIGYLT---RVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIM   82 (143)
Q Consensus         6 ~~~~~i~---k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~   82 (143)
                      .+||+|+   |+|+|+|||+++.           .|+|++  ||||||+|+|+|+|+.+ +.|||+||++||+++++ |+
T Consensus        18 ~~~~~v~v~~k~~~F~aaH~l~~-----------~g~c~~--lHGH~y~v~v~v~g~ld-~~Gmv~Df~~lk~~~~~-i~   82 (180)
T 3lx3_A           18 DQIAELLVESPLFSFNCAHFIAF-----------KGFRET--LHGHNYNVSLRLRGNIQ-GDGYVIDFSILKEKVRK-VC   82 (180)
T ss_dssp             CCEEEEEEEEEEEEEEEEECCEE-----------TTEECC--CEEEEEEEEEEEEEECC-TTSCSSCHHHHHHHHHH-HH
T ss_pred             CCeEEEEEeccEEEEEEEeecCC-----------CCCccC--ccCceEEEEEEEEeccC-CCCeEEEHHHHHHHHHH-HH
Confidence            5677773   5689999999953           499999  89999999999999655 69999999999999998 99


Q ss_pred             ccCCccccc---CcCCCCC---------------------------CCCCCHHHHHHHHHHHHHhhcCC------CceEE
Q psy16342         83 VPMDHKNLD---KDVPYFA---------------------------DVVSTSENVAIFIWNNLKKIMKE------PELLY  126 (143)
Q Consensus        83 ~~lDH~~Ln---~d~~~f~---------------------------~~~pT~E~lA~~i~~~l~~~l~~------~~~l~  126 (143)
                      +.|||++||   ++++.|.                           ..|||+|+||+||+++|++.||+      +++++
T Consensus        83 ~~lDH~~L~p~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lLp~~npTaEnlA~~i~~~L~~~Lp~~~l~~~~v~~~  162 (180)
T 3lx3_A           83 KQLDHHFILPMYSDVLNIQEVNDNFKITCEDNSEYSFPKRDCVQIPIKHSSTEEIGLYILNQLIEEIDLPFLKTRSVNYM  162 (180)
T ss_dssp             HHHSSSEEEETTCSSEEEEEETTEEEEEETTCCEEEEEGGGEEEESCSSCCHHHHHHHHHHHHHHHHCHHHHHHTTCCEE
T ss_pred             HcCCccccCCCCCcchhhhhcCCceeeeecccceecCchhheeecCCCCCCHHHHHHHHHHHHHHhccccccccCCeEEE
Confidence            999999995   2333331                           15899999999999999999973      78999


Q ss_pred             EEEEEecCCCEEEEecC
Q psy16342        127 EVKLYETDKNIVLYRGE  143 (143)
Q Consensus       127 ~V~v~Et~~~~a~y~~~  143 (143)
                      +|+|||||+++|+|+++
T Consensus       163 ~V~v~Etp~~~A~Y~~~  179 (180)
T 3lx3_A          163 EVTVSESPSQKATVHRN  179 (180)
T ss_dssp             EEEEEEETTEEEEEEEE
T ss_pred             EEEEEeCCCCEEEEEec
Confidence            99999999999999864

>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}

Probab=90.37  E-value=3.1  Score=29.00  Aligned_cols=91  Identities=9%  Similarity=0.026  Sum_probs=62.3

Q ss_pred             EEEEE-EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhhh
Q psy16342          9 GYLTR-VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAIM   82 (143)
Q Consensus         9 ~~i~k-~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i~   82 (143)
                      -.|.. .+.|.+-|=+.              .-++  .-|-.+.|.+++.-+.     .|+-.-.+|++.|-+.+++.+ 
T Consensus        17 D~I~i~~L~~~a~iGv~--------------~~Er--~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~I~~~v-   79 (132)
T 3o1k_A           17 DKVFIEQLEVITTIGVY--------------DWEQ--QIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHI-   79 (132)
T ss_dssp             CEEEEEEEEEEEEECSS--------------TTGG--GSCEEEEEEEEEECCCHHHHHHCCGGGSCCHHHHHHHHHHHH-
T ss_pred             cEEEECceEEEEEEcCC--------------HHHh--ccCceEEEEEEEEEcchhcccccccccccCHHHHHHHHHHHH-
Confidence            34444 48898877442              1233  6899999999998653     123456899999999888733 


Q ss_pred             ccCCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEe
Q psy16342         83 VPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYE  132 (143)
Q Consensus        83 ~~lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~E  132 (143)
                      +.          ..|    -+.|.||..|.+.+....+  +.-++|+|.-
T Consensus        80 ~~----------~~~----~LiE~lA~~Ia~~ll~~~~--v~~v~V~V~K  113 (132)
T 3o1k_A           80 EQ----------GRF----LLVERVAEEVAELIMTRFA--VPWLRIRLTK  113 (132)
T ss_dssp             HT----------CEE----SCHHHHHHHHHHHHHHHHC--CSEEEEEEEE
T ss_pred             hc----------CCc----ccHHHHHHHHHHHHHHhCC--ccEEEEEEEC
Confidence            22          112    3689999999999888765  5667777764

>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3

Probab=87.60  E-value=5.1  Score=28.44  Aligned_cols=87  Identities=16%  Similarity=0.069  Sum_probs=60.4

Q ss_pred             EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342         14 VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus        14 ~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .+.|.+=|=+..              -++  ..|-.+.|.+++.-+.     .|+-.-.+|+..|-+.+++.+ .     
T Consensus        28 ~L~~~a~iGv~~--------------~Er--~~~Q~~~vdl~l~~d~~~A~~sDdl~~tvdY~~v~~~I~~~v-~-----   85 (146)
T 1sql_A           28 GLKFYGFHGAIA--------------EER--TLGQMFLVDIDAWVSLKKAGESDNLEDTISYVDIFSLAKEIV-E-----   85 (146)
T ss_dssp             EEEEEECCCSSH--------------HHH--HHCEEEEEEEEEECCCHHHHHHCCGGGSCCHHHHHHHHHHHH-T-----
T ss_pred             CeEEEEEECCCH--------------HHh--ccCCEEEEEEEEEEcchhcccccCchhccCHHHHHHHHHHHH-H-----
Confidence            488888774421              123  5899999999997653     133566899999999988733 2     


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEe
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYE  132 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~E  132 (143)
                           -..|    -+.|.+|..|.+.+....|. +.-++|+|.-
T Consensus        86 -----~~~f----~LiE~lA~~Ia~~il~~fp~-v~~v~V~V~K  119 (146)
T 1sql_A           86 -----GSPR----NLLETVAELIASKTLEKFHQ-INAVRVKLSK  119 (146)
T ss_dssp             -----SSCC----SCHHHHHHHHHHHHHHHCTT-CCEEEEEEEE
T ss_pred             -----cCCc----chHHHHHHHHHHHHHHHCCC-ceEEEEEEEC
Confidence                 1122    46899999999999888763 5566777653

>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}

Probab=87.52  E-value=5.9  Score=27.98  Aligned_cols=92  Identities=11%  Similarity=0.008  Sum_probs=60.1

Q ss_pred             EEEEEEE-EEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC------CCCCCeEeehHHHHHHHHhh
Q psy16342          8 IGYLTRV-EKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI------SKERGMVLNINDLKVYMVDA   80 (143)
Q Consensus         8 ~~~i~k~-~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~------~~~~g~viDF~~lk~~i~~~   80 (143)
                      +-+|..+ +.|.+-|=+..              -++  ..|-.+.|.+++.-+.      .|+-.-.+||..|-+.+++.
T Consensus        22 ~D~I~I~~L~~~a~iGv~~--------------~Er--~~~Q~~~vdl~l~~d~~~A~~~sDdl~~tvdY~~v~~~I~~~   85 (143)
T 3v9o_A           22 CRRLYLRNHEVYMNIGAFE--------------HEK--RGEQRVVINVDLFVPLALTTPVEDKLREVVDYDLMKQSVAQC   85 (143)
T ss_dssp             EEEEEEEEEEEEECCCC----------------------CCEEEEEEEEEEEEGGGSCCSSCCGGGSCCTHHHHHHHHHH
T ss_pred             CCEEEEcceEEEEEECCCH--------------HHH--CCCCeEEEEEEEEEcchhccCCCccchhccCHHHHHHHHHHH
Confidence            5555544 89988774421              233  6899999999987542      13345689999999999883


Q ss_pred             hhccCCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEe
Q psy16342         81 IMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYE  132 (143)
Q Consensus        81 i~~~lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~E  132 (143)
                      + +.          ..|    -+.|.||..|.+.+... + .+.-++|+|.-
T Consensus        86 v-~~----------~~~----~LlE~lAe~Ia~~il~~-~-~v~~v~V~V~K  120 (143)
T 3v9o_A           86 V-AR----------GHI----HLQETLCDAIAASLLAH-D-AVRAVRVSTEK  120 (143)
T ss_dssp             H-HT----------CCC----CSHHHHHHHHHHHHHSS-T-TCCEEEEEEEE
T ss_pred             H-hc----------CCc----chHHHHHHHHHHHHHhc-C-CccEEEEEEEC
Confidence            3 22          112    36899999999988875 4 45566666653

>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}

Probab=83.55  E-value=9.6  Score=26.91  Aligned_cols=86  Identities=10%  Similarity=0.059  Sum_probs=60.2

Q ss_pred             EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342         14 VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus        14 ~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .+.|.+-|=+..              -++  .-|-.+.|.+++.-+.     .|+-.-.+|++.|-+.+++.+ +.    
T Consensus        32 ~L~~~a~iGv~~--------------~Er--~~~Q~~~vdl~l~~d~~~A~~sDdl~~tvdY~~v~~~I~~~v-~~----   90 (143)
T 3r2e_A           32 ELSVITTIGVYD--------------WEQ--TIQQKLVFDIEMGWDNRKAAGSDDVNDCLSYADISEAVIQHV-GS----   90 (143)
T ss_dssp             EEEEEEEECSSH--------------HHH--TSEEEEEEEEEEEECHHHHHTCCCTTSSCCHHHHHHHHHHHH-HS----
T ss_pred             ceEEEEEECCCH--------------HHc--ccCceEEEEEEEEEcchhcccccccccccCHHHHHHHHHHHH-hc----
Confidence            488888664421              233  5899999999998642     233566899999999998833 22    


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEe
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYE  132 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~E  132 (143)
                           -+ |    -+.|.||..|.+.+....+  +.-++|+|.-
T Consensus        91 -----~~-f----~LlE~LAe~Ia~~ll~~~~--v~~v~V~V~K  122 (143)
T 3r2e_A           91 -----QR-F----ALVERVAEEVAELLLRRFN--SPWVRIKVSK  122 (143)
T ss_dssp             -----SE-E----SCHHHHHHHHHHHHHHHHC--CSEEEEEEEC
T ss_pred             -----CC-c----ccHHHHHHHHHHHHHHhCC--ccEEEEEEEC
Confidence                 11 2    3689999999999888776  5567777754

>1z9w_A DHNA, dihydroneopterin aldolase; FOLB, structural genomics, TB ST genomics; 2.50A {Mycobacterium tuberculosis H37RV} SCOP: d.96.1.3

Probab=82.57  E-value=9.9  Score=26.35  Aligned_cols=85  Identities=13%  Similarity=0.077  Sum_probs=52.7

Q ss_pred             EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCC-----CCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342         14 VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPIS-----KERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus        14 ~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~-----~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .+.|.+=|=+..              -++  ..|-.+.|.+++.-+..     |+-.-.+|+..+-+.+++.+..     
T Consensus         9 ~L~~~a~iGv~~--------------~Er--~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~i~~~v~~-----   67 (133)
T 1z9w_A            9 GLTVHGRHGVYD--------------HER--VAGQRFVIDVTVWIDLAEAANSDDLADTYDYVRLASRAAEIVAG-----   67 (133)
T ss_dssp             EEEEEC---------------------------CCEEEEEEEEEECCCCGGGCSSHHHHSCHHHHHHHHHHHHHS-----
T ss_pred             CeEEEEEECCCH--------------HHH--ccCCEEEEEEEEEEcchhcccccCchhccCHHHHHHHHHHHHhc-----
Confidence            478888774422              233  68999999999986532     2234578999999998873321     


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEE
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLY  131 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~  131 (143)
                            ..|    -+.|.||..|.+.+.. .|. +.-++|+|.
T Consensus        68 ------~~~----~LiE~lA~~Ia~~il~-~~~-v~~v~V~v~   98 (133)
T 1z9w_A           68 ------PPR----KLIETVGAEIADHVMD-DQR-VHAVEVAVH   98 (133)
T ss_dssp             ------SSC----CCHHHHHHHHHHHHHH-STT-EEEEEEEEE
T ss_pred             ------CCc----chHHHHHHHHHHHHhc-CCC-ccEEEEEEE
Confidence                  122    4689999999999988 763 445566554

>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*

Probab=81.22  E-value=10  Score=25.62  Aligned_cols=86  Identities=14%  Similarity=0.084  Sum_probs=59.7

Q ss_pred             EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342         14 VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus        14 ~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .+.|.+=|=+.                ...+..|-.+.|.+++.-+.     .|+-.-.+|++.+-+.+++.+..     
T Consensus         9 ~l~~~~~iGv~----------------~~Er~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~i~~~v~~-----   67 (119)
T 1nbu_A            9 GLTVHGRHGVY----------------DHERVAGQRFVIDVTVWIDLAEAANSDDLADTYDYVRLASRAAEIVAG-----   67 (119)
T ss_dssp             EEEEEECCCSS----------------TTHHHHCEEEEEEEEEECCCHHHHHHCCGGGSCCHHHHHHHHHHHHHS-----
T ss_pred             CeEEEEEECCC----------------HHHhccCCEEEEEEEEEEcchhccccccchhccCHHHHHHHHHHHHhc-----
Confidence            47888877442                22226899999999997653     13355678999999888873311     


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEe
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYE  132 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~E  132 (143)
                            ..|    -+.|.+|..|.+.+.. .|. +.-++|+|.-
T Consensus        68 ------~~~----~LiE~lA~~Ia~~~l~-~~~-v~~v~V~v~K   99 (119)
T 1nbu_A           68 ------PPR----KLIETVGAEIADHVMD-DQR-VHAVEVAVHK   99 (119)
T ss_dssp             ------SCC----SCHHHHHHHHHHHHHT-STT-CCEEEEEEEC
T ss_pred             ------CCc----ccHHHHHHHHHHHHhc-CCC-ccEEEEEEEC
Confidence                  122    4689999999999988 763 5567777754

>2cg8_A Dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase; lyase/transferase, folate biosynthesis, pyrophosphokinase, lyase; 2.9A {Streptococcus pneumoniae}

Probab=80.13  E-value=14  Score=28.84  Aligned_cols=86  Identities=13%  Similarity=0.022  Sum_probs=55.8

Q ss_pred             EEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeC-----CCCCCeEeehHHHHHHHHhhhhccCCcc
Q psy16342         14 VEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPI-----SKERGMVLNINDLKVYMVDAIMVPMDHK   88 (143)
Q Consensus        14 ~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~-----~~~~g~viDF~~lk~~i~~~i~~~lDH~   88 (143)
                      .++|.|-|=+..              -++  ..|-.+.|.+++.-+.     .|+-.-.+|++.|.+.|.+.+ +     
T Consensus         8 ~L~~~a~iGV~~--------------~Er--~~~Q~~~vdv~l~~d~~~a~~sDdl~~tvdY~~v~~~I~~~~-~-----   65 (270)
T 2cg8_A            8 DLEMFAYHGLFP--------------SEK--ELGQKFIVSAILSYDMTKAATDLDLTASVHYGELCQQWTTWF-Q-----   65 (270)
T ss_dssp             EEEEEECCCSSH--------------HHH--HHCEEEEEEEEEEECCHHHHC-------CCHHHHHHHHHHHH-H-----
T ss_pred             CeEEEEEeCCCH--------------HHH--ccCcEEEEEEEEEEchhhccccCCccccccHHHHHHHHHHHH-H-----
Confidence            478888775421              123  5889999999997542     223455799999999988733 2     


Q ss_pred             cccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEE
Q psy16342         89 NLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLY  131 (143)
Q Consensus        89 ~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~  131 (143)
                           -..|    -+.|.+|..|.+.+....|. +.-++|+|.
T Consensus        66 -----~~~f----~LiE~lA~~Ia~~ll~~~~~-v~~V~V~v~   98 (270)
T 2cg8_A           66 -----ETSE----DLIETVAYKLVERTFESYPL-VQEMKLELK   98 (270)
T ss_dssp             -----SCCC----SCHHHHHHHHHHHHHHHCTT-CCEEEEEEE
T ss_pred             -----cCCc----chHHHHHHHHHHHHHHhcCC-ceEEEEEEe
Confidence                 1122    47899999999999887763 445666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d2g64a1	139	d.96.1.2 (A:1-139) 6-pyruvoyl tetrahydropterin syn	3e-52
d1b66a_	138	d.96.1.2 (A:) 6-pyruvoyl tetrahydropterin synthase	2e-51
d2a0sa1	163	d.96.1.2 (A:18-180) 6-pyruvoyl tetrahydropterin sy	8e-18

>d2g64a1 d.96.1.2 (A:1-139) 6-pyruvoyl tetrahydropterin synthase {Caenorhabditis elegans [TaxId: 6239]} Length = 139

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  160 bits (405), Expect = 3e-52
 Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 1/138 (0%)

Query: 5   KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
           ++PI  + RV+ FSA HRLHS  L+D ENK T+GKCNN +GHGHNY  +V L+G +    
Sbjct: 3   RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTS 62

Query: 65  GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
           GMV ++  LK   +  ++  +DH+NLDKDV +F   VSTSENVAI+++  LK +M  P +
Sbjct: 63  GMVYDLAKLK-KEMSLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSV 121

Query: 125 LYEVKLYETDKNIVLYRG 142
           LY+V + ET KNI  Y+G
Sbjct: 122 LYKVTIEETPKNIFTYKG 139

>d1b66a_ d.96.1.2 (A:) 6-pyruvoyl tetrahydropterin synthase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  157 bits (399), Expect = 2e-51
 Identities = 83/134 (61%), Positives = 104/134 (77%), Gaps = 1/134 (0%)

Query: 10  YLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN 69
            L+R+  FSA HRLHSP L+ EEN   +GKCNN +GHGHNY V VT+ G I    GMV+N
Sbjct: 6   RLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMN 65

Query: 70  INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVK 129
           + DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++     LY+VK
Sbjct: 66  LTDLKEYMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGA-LYKVK 124

Query: 130 LYETDKNIVLYRGE 143
           +YETD NIV+Y+GE
Sbjct: 125 VYETDNNIVVYKGE 138

>d2a0sa1 d.96.1.2 (A:18-180) 6-pyruvoyl tetrahydropterin synthase {Plasmodium vivax [TaxId: 5855]} Length = 163

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Plasmodium vivax [TaxId: 5855]

 Score = 72.8 bits (178), Expect = 8e-18
 Identities = 29/162 (17%), Positives = 50/162 (30%), Gaps = 51/162 (31%)

Query: 16  KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
            F+  H +              G     HGH  NY V + L+G I    G V++ + LK 
Sbjct: 14  SFNCAHFIAFK-----------GFRETLHGH--NYNVSLRLRGNIQ-GDGYVIDFSILKE 59

Query: 76  YMVDAIMVPMDHKNL------------------------------DKDVPYFADVVSTSE 105
            +   +   +DH  +                               +D        S++E
Sbjct: 60  KV-RKVCKQLDHHFILPMYSDVLNIQEVNDNFKITCEDNSEYSFPKRDCVQIPIKHSSTE 118

Query: 106 NVAIFIWNNLKKIMKEPEL------LYEVKLYETDKNIVLYR 141
            + ++I N L + +  P L        EV + E+        
Sbjct: 119 EIGLYILNQLIEEIDLPFLKTRSVNYMEVTVSESPSQKATVH 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d2g64a1	139	6-pyruvoyl tetrahydropterin synthase {Caenorhabdit	100.0
d1b66a_	138	6-pyruvoyl tetrahydropterin synthase {Rat (Rattus	100.0
d2a0sa1	163	6-pyruvoyl tetrahydropterin synthase {Plasmodium v	100.0

>d2g64a1 d.96.1.2 (A:1-139) 6-pyruvoyl tetrahydropterin synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-50  Score=295.15  Aligned_cols=137  Identities=51%  Similarity=0.866  Sum_probs=131.5

Q ss_pred             CCcEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhcc
Q psy16342          5 KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVP   84 (143)
Q Consensus         5 ~~~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~   84 (143)
                      +|||++|+|+++|+|||||+++++++++|++.+|||+++.+|||||.|+|+|+|+.+++.||||||++||+++++ |++.
T Consensus         3 ~m~~~~itr~~~F~AaH~l~~~~~~~~~n~~~~GkC~~~~~HGH~y~vev~v~g~~~~~~G~viDF~~lk~~~~~-i~~~   81 (139)
T d2g64a1           3 RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTSGMVYDLAKLKKEMSL-VLDT   81 (139)
T ss_dssp             CCCEEEEEEEEEEEEEECCCCTTSCHHHHHHHHGGGGCTTCEEEEEEEEEEEEEECCTTTCCSSCHHHHHHHHHH-HHHT
T ss_pred             cCcEEEEEEEEEEEcccccCCCCcccccCcccCCcCCCCCCCCCeEEEEEEEEeecCCcCCEEEEHHHHHhHHHH-HHHH
Confidence            799999999999999999999999999999999999985579999999999999999889999999999999986 9999


Q ss_pred             CCcccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEec
Q psy16342         85 MDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRG  142 (143)
Q Consensus        85 lDH~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~  142 (143)
                      |||++||.++|+|+..|||+|+||+||+++|++.|+.+..+.+|+|||||++||+|+|
T Consensus        82 lDH~~Ln~~~~~f~~~nPTaEnla~~i~~~l~~~l~~~~~L~~V~v~ET~~~~a~Y~G  139 (139)
T d2g64a1          82 VDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSVLYKVTIEETPKNIFTYKG  139 (139)
T ss_dssp             TTTEEHHHHCGGGGTSCCCHHHHHHHHHHHHHHHCSSGGGEEEEEEEEETTEEEEECC
T ss_pred             hhhhhhcccchhhcccCchHHHHHHHHHHHHHHhcCCCceEEEEEEEeCCCcEEEEEC
Confidence            9999999889999989999999999999999999998788999999999999999987

>d1b66a_ d.96.1.2 (A:) 6-pyruvoyl tetrahydropterin synthase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-50  Score=294.03  Aligned_cols=136  Identities=61%  Similarity=1.019  Sum_probs=129.7

Q ss_pred             cEEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCC
Q psy16342          7 PIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMD   86 (143)
Q Consensus         7 ~~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lD   86 (143)
                      ++++|+|+++|+|||||+++++++++|+.++|||+++++|||||+|+|+|+|+.+++.|||+||++||++++.+|.+.||
T Consensus         3 ~~~~ltr~~~F~AaHrl~~~~~s~~~n~~~~GkC~~~~~HGH~y~veV~v~g~~~~~~G~v~Df~~lk~~~~~~I~~~lD   82 (138)
T d1b66a_           3 RRARLSRLVSFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKEYMEEAIMKPLD   82 (138)
T ss_dssp             CEEEEEEEEEEEEEECCCCTTSCHHHHHHHHGGGGCTTCEEEEEEEEEEEEEECCTTTCCSSCHHHHHHHHHHHTHHHHT
T ss_pred             ceEEEEEEEEEEcccCcCCCCCChhhcccccCcCCCCCCCCCEEEEEEEEEeecCCcCCeEEEHHHHHHHHHHhhhhhhh
Confidence            57899999999999999999999999999999999966699999999999999998899999999999999988999999


Q ss_pred             cccccCcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEEEEecCCCEEEEecC
Q psy16342         87 HKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKNIVLYRGE  143 (143)
Q Consensus        87 H~~Ln~d~~~f~~~~pT~E~lA~~i~~~l~~~l~~~~~l~~V~v~Et~~~~a~y~~~  143 (143)
                      |++||.++|+|.+.+||+|+||+|||++|++.||. .++.+|+|||||++||+|+||
T Consensus        83 H~~Ln~~~p~~~~~~PTaEniA~~i~~~l~~~l~~-~~l~~V~v~ET~~~~a~Y~ge  138 (138)
T d1b66a_          83 HKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPV-GALYKVKVYETDNNIVVYKGE  138 (138)
T ss_dssp             TEEHHHHCGGGTSSCCCHHHHHHHHHHHHHHHSCT-TCEEEEEEEEETTEEEEECCC
T ss_pred             hhhccccChhhccCCchHHHHHHHHHHHHHhhCCc-cceEEEEEEECCCCEEEEeCC
Confidence            99999889999989999999999999999999985 468999999999999999986

>d2a0sa1 d.96.1.2 (A:18-180) 6-pyruvoyl tetrahydropterin synthase {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a+b)
fold: T-fold
superfamily: Tetrahydrobiopterin biosynthesis enzymes-like
family: 6-pyruvoyl tetrahydropterin synthase
domain: 6-pyruvoyl tetrahydropterin synthase
species: Plasmodium vivax [TaxId: 5855]

Probab=100.00  E-value=2e-38  Score=235.30  Aligned_cols=121  Identities=21%  Similarity=0.270  Sum_probs=103.9

Q ss_pred             EEEEEEEEEEeeceecCCCCCCcccchhccCCCCCCCCceeeEEEEEEEEeeCCCCCCeEeehHHHHHHHHhhhhccCCc
Q psy16342          8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDH   87 (143)
Q Consensus         8 ~~~i~k~~~F~aAH~l~~~~~~~~~~~~~~g~c~~~~lHGH~y~v~v~v~g~~~~~~g~viDF~~lk~~i~~~i~~~lDH   87 (143)
                      |+..++.|+|+|||+++.           .|+|++  ||||||+|+|+++|+.++ +|||+||++||++++. +++.|||
T Consensus         6 ~~~~~~~f~F~aaH~l~~-----------~g~C~~--lHGH~y~v~v~l~g~ld~-~gmv~DF~~lK~~i~~-i~d~lDH   70 (163)
T d2a0sa1           6 LLVESPLFSFNCAHFIAF-----------KGFRET--LHGHNYNVSLRLRGNIQG-DGYVIDFSILKEKVRK-VCKQLDH   70 (163)
T ss_dssp             EEEEEEEEEEEEEECCEE-----------TTEECC--CEEEEEEEEEEEEEECCT-TSCSSCHHHHHHHHHH-HHHHHSS
T ss_pred             EEEEcceEEEeCCccCCC-----------CCCcCC--ccCCCEEEEEEEEEEcCC-ccccccHHHHHHHHHH-HHHhcCH
Confidence            566677799999999964           389999  899999999999998665 8999999999999998 7888999


Q ss_pred             cccc-CcCCC-----------------------------CCCCCCCHHHHHHHHHHHHHhhcCC------CceEEEEEEE
Q psy16342         88 KNLD-KDVPY-----------------------------FADVVSTSENVAIFIWNNLKKIMKE------PELLYEVKLY  131 (143)
Q Consensus        88 ~~Ln-~d~~~-----------------------------f~~~~pT~E~lA~~i~~~l~~~l~~------~~~l~~V~v~  131 (143)
                      ++|+ .+.|.                             +...|||+|+||+||+++|.+.++.      ++++++|+||
T Consensus        71 ~~l~~~~d~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~lp~~~pTaE~lA~~i~~~l~~~l~~~~~~~~~v~~~~V~v~  150 (163)
T d2a0sa1          71 HFILPMYSDVLNIQEVNDNFKITCEDNSEYSFPKRDCVQIPIKHSSTEEIGLYILNQLIEEIDLPFLKTRSVNYMEVTVS  150 (163)
T ss_dssp             SEEEETTCSSCEEEEETTEEEEECTTCCEEEEEGGGEEEESCSSCCHHHHHHHHHHHHHHHHCHHHHHHTTCCEEEEEEE
T ss_pred             HHhcccCCcchhhhhccccceeeecccceecccCCcEEEcCCCCccHHHHHHHHHHHHHHhhcccccCccceEEEEEEEE
Confidence            9995 22221                             1135799999999999999999984      7899999999


Q ss_pred             ecCCCEEEEecC
Q psy16342        132 ETDKNIVLYRGE  143 (143)
Q Consensus       132 Et~~~~a~y~~~  143 (143)
                      |||+++|+|+.+
T Consensus       151 Etp~~~A~y~~~  162 (163)
T d2a0sa1         151 ESPSQKATVHRN  162 (163)
T ss_dssp             EETTEEEEEEEE
T ss_pred             eCCCCEEEEEec
Confidence            999999999863