Psyllid ID: psy16482

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
Protein Sequence
MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccccccEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccEcccccccccccccccEEcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccEEcEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHccccccccccEEEEEEHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccc
Coil and Loop (DISEMBL)
mvlthnfslptyeeleqeevplssaALKAGAfhfgktcelenneFVLCRQElndprkcitegkavTSCALSFFRKVKESCFDEFQVYANcvdksstnfdltpcrntQAVFDKCmndklgidrpvynyflrpfvhdsnrpkpkpsdplvfsgvpkklddneprtpakyggrnhgAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRIcygenhgarrslgveyslsHSRRYELQELIKFLNKMAVERKLhgnglmmsvkgSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMlkpdvplnsrvtkqwqtigfqgddpktdfrgmgilgLDNLLHfaseypttAQHVLQHSLHPQYGYAFAIVGINLTSLAYHlfqddaaktivynsckslpsinvfhHFYCYLFYEFDRVwmeskpcvmdfsnvktkFENNIRSLLSnssvllktdlsidiv
Flexible Loop (DISEMBL)
mvlthnfslptyeeLEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVdksstnfdltpcRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVhdsnrpkpkpsdplvfsgvpkklddneprtpakyggrnhgaFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRIcygenhgarrsLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVtkqwqtigfqgddpkTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNirsllsnssvllktdlsidiv
Low Complexity Region (SEG)
MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV
Disordered region (IsUnstruct)
************************AALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVH**********************************GRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLK********
Disordered Region (DISOPRED)
****HNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDS*********************************RNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGA****************ELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKP**********QWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSI***
Disordered Region (DISEMBL)
MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV
Disordered Region (DISPRO)
**LTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDI*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	493	2.2.26 [Sep-21-2011]
Q3V1U8	326	ELMO domain-containing pr	yes	N/A	0.578	0.874	0.401	1e-63
Q0IIE6	326	ELMO domain-containing pr	yes	N/A	0.578	0.874	0.398	9e-63
Q8IZ81	293	ELMO domain-containing pr	yes	N/A	0.576	0.969	0.42	1e-62
Q5NVD7	326	ELMO domain-containing pr	no	N/A	0.578	0.874	0.398	3e-62
Q8N336	334	ELMO domain-containing pr	no	N/A	0.578	0.853	0.389	1e-61
Q08DZ3	293	ELMO domain-containing pr	no	N/A	0.578	0.972	0.415	2e-61
Q8BGF6	293	ELMO domain-containing pr	no	N/A	0.576	0.969	0.411	6e-60
Q54VR8	284	ELMO domain-containing pr	yes	N/A	0.515	0.894	0.336	5e-35
Q9DCJ5	172	NADH dehydrogenase [ubiqu	no	N/A	0.302	0.866	0.428	3e-27
Q0MQB1	172	NADH dehydrogenase [ubiqu	no	N/A	0.275	0.790	0.442	1e-26

>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2 SV=2

 Score =  244 bits (622), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 188/326 (57%), Gaps = 41/326 (12%)

Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
           V +++Y + +W  +         K+++RK T  CELQRICYG   GA R++ +E SL  S
Sbjct: 11  VCLYFYCKFLWRCM---------KFVMRKLTGRCELQRICYGTKPGASRTMKIETSLRDS 61

Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
           +   LQ  +           +H +    +++ ++D I+ +KKINP ++     ++  C+ 
Sbjct: 62  KSKLLQTSVS----------VHPD----AIEKTIDDIMELKKINPDINPQLGISLQACLL 107

Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
            I GYR L  ++  L R  YD++N +HEE LL+LW++LKP+ PL SRV+KQW  IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGD 167

Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
           DPKTDFRGMG+LGL NL +FA    T AQ VL  S+HP+                  GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIGYS 227

Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
           FAIVGIN+T LAY+L    A KT  YN     P+++ F   +CYL +EF + W+E  P  
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287

Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
           +M+F+ V+ KF   I   L N  + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.
Mus musculus (taxid: 10090)

>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1

 Score =  241 bits (615), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 185/326 (56%), Gaps = 41/326 (12%)

Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
           V +F+Y + +W  +         K+++RK T  CELQRICY    GA R++ +E SL  S
Sbjct: 11  VCLFFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61

Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
           +   LQ  +           +H +    +++ ++D I+ +KKINP ++     ++  C+ 
Sbjct: 62  KSKLLQTSVS----------VHPD----AIEKTIDDIMELKKINPDINPQLGISLQACLL 107

Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
            I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRRESYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167

Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
           DPKTDFRGMG+LGL NL +FA      AQ VL  SLHP+                  GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYS 227

Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
           FAIVGIN+T LAY+L    A KT  YN     P+++ F   +CYL +EF + W+E  P  
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287

Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
           +M+F+ V+ KF   I   L N  + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score =  241 bits (615), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/300 (42%), Positives = 179/300 (59%), Gaps = 16/300 (5%)

Query: 186 VWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELI 245
           +W   Y  + R   KW+LR+ T  CELQRI +    GA+R+  +E SL++S+   LQ+  
Sbjct: 5   LWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVLQKAT 63

Query: 246 KFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLK 305
             +                 V   VD I+  K INP    SF   +  C+  I GY+QL 
Sbjct: 64  HVVQS--------------EVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLY 109

Query: 306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
            ++  + +  YD++N +HEE L++LW +L P   LN+R++KQW  IGFQGDDPKTDFRGM
Sbjct: 110 LDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGM 169

Query: 366 GILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
           GILGL NL++F+  Y + A  +L  S HP+ GY++AIVGINLT +AY L + +A K  +Y
Sbjct: 170 GILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLY 229

Query: 426 NSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVLL 484
           N    +P++  FH FYCYL YEFD+ W E +P  +M F+  + KF   I+ LL + +V L
Sbjct: 230 NLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVAL 289

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2 SV=1

 Score =  239 bits (611), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 186/326 (57%), Gaps = 41/326 (12%)

Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
           V +++Y + +W  +         K+++RK T  CELQRICY    GA R++ +E SL  S
Sbjct: 11  VCLYFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61

Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
           +   LQ  +           +H +    +++ +++ I+ +KKINP V+     ++  C+ 
Sbjct: 62  KSKLLQTSVS----------VHPD----AIEKTIEDIMELKKINPDVNPQLGISLQACLL 107

Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
            I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167

Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ-----------------YGYA 399
           DPKTDFRGMG+LGL NL +FA    T AQ VL  SLHP+                  GY+
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYS 227

Query: 400 FAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC- 458
           FAIVGIN+T LAY+L    A KT  YN     P+++ F   +CYL +EF + W+E  P  
Sbjct: 228 FAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMD 287

Query: 459 VMDFSNVKTKFENNIRSLLSNSSVLL 484
           +M+F+ V+ KF   I   L N  + L
Sbjct: 288 IMEFNRVREKFRKRIIKQLQNPDMAL 313

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Pongo abelii (taxid: 9601)

>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2 SV=3

 Score =  237 bits (605), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 186/334 (55%), Gaps = 49/334 (14%)

Query: 177 VIMFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHS 236
           V +++Y + +W  +         K+++RK T  CELQRICY    GA R++ +E SL  S
Sbjct: 11  VCLYFYCKFLWRCL---------KFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRDS 61

Query: 237 RRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIE 296
           +   LQ  +           +H +    +++ +++ I+ +KKINP V+     ++  C+ 
Sbjct: 62  KSKLLQTSVS----------VHPD----AIEKTIEDIMELKKINPDVNPQLGISLQACLL 107

Query: 297 HIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGD 356
            I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQGD
Sbjct: 108 QIVGYRNLIADVEKLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGD 167

Query: 357 DPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ--------------------- 395
           DPKTDFRGMG+LGL NL +FA    T AQ VL  SLHP+                     
Sbjct: 168 DPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKR 227

Query: 396 ----YGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRV 451
                GY+FAIVGIN+T LAY+L    A KT  YN     P+++ F   +CYL +EF + 
Sbjct: 228 MDKAIGYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKF 287

Query: 452 WMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLL 484
           W+E  P  +M+F+ V+ KF   I   L N  + L
Sbjct: 288 WIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMAL 321

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Homo sapiens (taxid: 9606)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score =  236 bits (603), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/301 (41%), Positives = 181/301 (60%), Gaps = 16/301 (5%)

Query: 185 PVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQEL 244
            +W   Y  + R   KW+LR+ T  CELQRI +    GA+R+  +E SL++S+   LQ+ 
Sbjct: 4   ALWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSKNKVLQK- 61

Query: 245 IKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQL 304
                 + V+ +         V   V+ I+  K INP    SF   +  C+  I GY+QL
Sbjct: 62  ----ATLVVQSE---------VDRCVEDIMKEKNINPEKDASFKICMKACLLQISGYKQL 108

Query: 305 KQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRG 364
             ++  + +  YD++N +HE+ L++LW +L P   L +R++KQW  IGFQGDDPKTDFRG
Sbjct: 109 YLDVESVRKKPYDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRG 168

Query: 365 MGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIV 424
           MGILGL NL++F+  Y + A  +L  S HP+ GY++AIVGINLT +AY L + +A K  +
Sbjct: 169 MGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHL 228

Query: 425 YNSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVL 483
           YN    +P++  FH FYCYL YEFD+ W E KP  +M F+  + KF   I+ LL + +V 
Sbjct: 229 YNFVPGIPTMEHFHQFYCYLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLLDCNVS 288

Query: 484 L 484
           L
Sbjct: 289 L 289

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score =  232 bits (591), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 182/306 (59%), Gaps = 22/306 (7%)

Query: 186 VWYSVYFSYVRPLFKWILRKTTRLCELQRI--CYGENHGARRSLGVEYSLSHSRRYELQE 243
           +W   Y  + R   KW+LR+ T  CELQRI   YG   GA+R+  +E SL++S+   LQ 
Sbjct: 5   LWEFFYGHFFRFWMKWLLRQMTGKCELQRIFDTYG---GAQRTYRIENSLTYSKNKVLQN 61

Query: 244 LIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQ 303
             + + +  ++R              +  I+  K I      SF   +  C+  I GY+Q
Sbjct: 62  ATR-VAQSELDR-------------CIANIMKEKNICSEKDTSFQICMRTCLLQITGYKQ 107

Query: 304 LKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFR 363
           L  ++  + +  YD+ NA+HE+ LL+LW +L P   L +R++KQW  IGFQGDDPKTDFR
Sbjct: 108 LYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFR 167

Query: 364 GMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTI 423
           GMGILGL NL++F+  Y + A  +L  S HP+ GY++AIVGINLT +AY L + +A K  
Sbjct: 168 GMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLH 227

Query: 424 VYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLL--SNS 480
           +YN    +P++  FH FYCYL YEFD+ W+E +P  +M F+  + KF   I+ LL   N+
Sbjct: 228 LYNFVPGVPTMEHFHQFYCYLVYEFDKFWLEEEPESIMYFNLYREKFHERIKGLLMDCNA 287

Query: 481 SVLLKT 486
            + LKT
Sbjct: 288 VLTLKT 293

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score =  149 bits (376), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 154/285 (54%), Gaps = 31/285 (10%)

Query: 198 LFKWILRKTTRLCELQRICYG-ENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERK 256
           ++K+I+   T   E++RICY  E     R   +E S+ +S+     +L+     M  E  
Sbjct: 10  IYKYIVHLFTGRSEIERICYNIELKSLDRLALIETSVDYSK-----QLVHIKKDMKSEFD 64

Query: 257 LHGNGL-MMSVKG------SVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEIT 309
                + ++ +KG      + D+I+L   I+    +S  + + + IE        KQ+I 
Sbjct: 65  PGDVAIKIVEIKGFNQELLAFDSIILPNLISALEPISLFQGLKKSIEK-------KQKIP 117

Query: 310 LLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILG 369
                 YD  N EHE  L RLW+ L PDV  ++R++K+W T+GFQG DP TDFRGMGILG
Sbjct: 118 ------YDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILG 171

Query: 370 LDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCK 429
           LDNL++F++++   A+ +L++S + +  Y FAI GIN+T+L  +L      K   + +  
Sbjct: 172 LDNLIYFSTQHSEDAREILKNS-NSKCCYPFAITGINITALVLNLIDKPHFKIYFFKNGS 230

Query: 430 SLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNI 473
           +L     F+  Y  +F  FDR +   KP  +M+F+ +K +FE  I
Sbjct: 231 TLTQ---FNELYSLVFISFDRFYQSKKPKSIMEFNTIKKEFETKI 272

Dictyostelium discoideum (taxid: 44689)

>sp|Q9DCJ5|NDUA8_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Mus musculus GN=Ndufa8 PE=1 SV=3

 Score =  123 bits (309), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 92/175 (52%), Gaps = 26/175 (14%)

Query: 8   SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
            LPT EEL+ EEV +SSA LKA A H+G  C+  N EF+LCR E  DPR+C+ EGK V  
Sbjct: 6   ELPTLEELKVEEVKVSSAVLKAAAHHYGAQCDKTNKEFMLCRWEEKDPRRCLKEGKLVNG 65

Query: 68  CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
           CAL+FFR++K  C + F  Y  C+D S+       CR  QA FD+C+ DKLG  RP    
Sbjct: 66  CALNFFRQIKSHCAEPFTEYWTCLDYSNMQL-FRHCRQQQAKFDQCVLDKLGWVRPDLGQ 124

Query: 128 FL--------RPF----VHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGR 170
                     RP      H   RP+P P    V  G  K         PAK+G R
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRARPEPNP----VIEGDLK---------PAKHGTR 166

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Mus musculus (taxid: 10090)

>sp|Q0MQB1|NDUA8_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan troglodytes GN=NDUFA8 PE=2 SV=3

 Score =  121 bits (303), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 11/147 (7%)

Query: 8   SLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTS 67
            LPT EEL+ +EV +SSA LKA A H+G  C+  N EF+LCR E  DPR+C+ EGK V  
Sbjct: 6   ELPTLEELKVDEVKISSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNK 65

Query: 68  CALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNY 127
           CAL FFR++K  C + F  Y  C+D +        CR  QA FD+C+ DKLG  RP    
Sbjct: 66  CALDFFRQIKRHCAEPFTEYWTCIDYTGQQL-FRHCRKQQAKFDECVLDKLGWVRPDLGE 124

Query: 128 FL--------RPFVHDS--NRPKPKPS 144
                     RP   +   +RP+P PS
Sbjct: 125 LSKVTKVKTDRPLPENPYHSRPRPDPS 151

Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.

Pan troglodytes (taxid: 9598)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	493
110671440	177	putative mitochondrial NADH:ubiquinone o	0.359	1.0	1.0	1e-101
350422549	312	PREDICTED: ELMO domain-containing protei	0.630	0.996	0.563	9e-99
322798075	312	hypothetical protein SINV_06231 [Solenop	0.604	0.955	0.561	2e-98
350422551	314	PREDICTED: ELMO domain-containing protei	0.602	0.945	0.577	2e-97
332018496	312	ELMO domain-containing protein 2 [Acromy	0.604	0.955	0.561	3e-97
345493243	312	PREDICTED: ELMO domain-containing protei	0.626	0.990	0.563	1e-96
383855956	312	PREDICTED: ELMO domain-containing protei	0.630	0.996	0.556	3e-96
340717767	312	PREDICTED: ELMO domain-containing protei	0.630	0.996	0.566	6e-95
340717769	313	PREDICTED: ELMO domain-containing protei	0.602	0.948	0.580	5e-94
307173769	312	ELMO domain-containing protein 2 [Campon	0.626	0.990	0.541	5e-93

>gi|110671440|gb|ABG81971.1| putative mitochondrial NADH:ubiquinone oxidoreductase 19 kDa subunit [Diaphorina citri]

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/177 (100%), Positives = 177/177 (100%)

Query: 1   MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCIT 60
           MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCIT
Sbjct: 1   MVLTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCIT 60

Query: 61  EGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGI 120
           EGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGI
Sbjct: 61  EGKAVTSCALSFFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGI 120

Query: 121 DRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTV 177
           DRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTV
Sbjct: 121 DRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGRNHGAFTV 177

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422549|ref|XP_003493199.1| PREDICTED: ELMO domain-containing protein 2-like isoform 1 [Bombus impatiens]

 Score =  367 bits (941), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 178/316 (56%), Positives = 229/316 (72%), Gaps = 5/316 (1%)

Query: 179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRR 238
           MF Y     +S+   Y RP+ KW+LR TTR+CELQRICYGE  GA R+L VE SL  SR 
Sbjct: 1   MFIYF----WSLVCWYFRPIVKWLLRHTTRMCELQRICYGELPGAPRTLAVEESLKLSRN 56

Query: 239 YELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHI 298
             ++ LI +LN +A +  +        +K ++ TIL+ KK+NPT H  F K+  +CIE I
Sbjct: 57  ANIKTLIVYLNDLADQCAITKQTKQKILKEAIITILVTKKVNPTAHPDFAKSFGKCIELI 116

Query: 299 WGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDP 358
           WGYRQL  E   L +T YDA+N+EHE +LL+LW +L P  PL++RVTKQWQ IGFQGDDP
Sbjct: 117 WGYRQLCVECEELRKTPYDADNSEHEFQLLKLWNLLMPYEPLDARVTKQWQHIGFQGDDP 176

Query: 359 KTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD 418
           KTDFRGMGILGL+NL++FA EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D 
Sbjct: 177 KTDFRGMGILGLENLVYFAQEYPSAATHVLSHSTHPRYGYAFAIVGINLTSMALRLLRDG 236

Query: 419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLL 477
           +AKT +YNS K  P+I  FH  YCYLFYEFD  W++SKP  +M+FS+++ KFEN+IR  L
Sbjct: 237 SAKTHIYNSSKGFPTIRAFHQLYCYLFYEFDGFWIDSKPSNMMEFSSIQEKFENSIRMAL 296

Query: 478 SNSSVLLKTDLSIDIV 493
           ++SS + + ++SID V
Sbjct: 297 TDSSTVFRINISIDNV 312

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322798075|gb|EFZ19914.1| hypothetical protein SINV_06231 [Solenopsis invicta]

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 168/299 (56%), Positives = 221/299 (73%), Gaps = 1/299 (0%)

Query: 194 YVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAV 253
           Y RPL KW LR TT++CELQRICYG+  GA RS  VE +L  SR   ++ L+ +LN +A 
Sbjct: 12  YFRPLIKWFLRHTTQMCELQRICYGQPSGAPRSFAVEEALGQSRNTNIRTLVAYLNNVAD 71

Query: 254 ERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLAR 313
            R +        ++ ++ T+L+ KKINPT H  F K+  +C+E IWGYRQL  E   L +
Sbjct: 72  HRGITTKTERKILEDAIRTVLVTKKINPTAHPDFAKSFGKCVELIWGYRQLCVECEELRK 131

Query: 314 TQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNL 373
           T Y A+N +HE+KLL+LW +L P  PL++RVTKQWQ IGFQGDDPKTDFRGMGILGL+NL
Sbjct: 132 TSYSADNPDHEQKLLKLWNLLMPYEPLDARVTKQWQEIGFQGDDPKTDFRGMGILGLENL 191

Query: 374 LHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPS 433
           ++FA EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D +AKT +YNS K+LP+
Sbjct: 192 IYFAQEYPSMATHVLSHSHHPRYGYAFAIVGINLTSMALKLLRDGSAKTHIYNSSKTLPT 251

Query: 434 INVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLLKTDLSID 491
           +  FH FYCYLFYEFD  W+ESKP  +M+FS+++ KFEN+IR  L+N S + + ++++D
Sbjct: 252 VRAFHQFYCYLFYEFDGFWIESKPSNMMEFSSIQEKFENSIRMALANPSTVFRINVAVD 310

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422551|ref|XP_003493200.1| PREDICTED: ELMO domain-containing protein 2-like isoform 2 [Bombus impatiens]

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 172/298 (57%), Positives = 221/298 (74%), Gaps = 1/298 (0%)

Query: 197 PLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERK 256
           P+ KW+LR TTR+CELQRICYGE  GA R+L VE SL  SR   ++ LI +LN +A +  
Sbjct: 17  PIVKWLLRHTTRMCELQRICYGELPGAPRTLAVEESLKLSRNANIKTLIVYLNDLADQCA 76

Query: 257 LHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQY 316
           +        +K ++ TIL+ KK+NPT H  F K+  +CIE IWGYRQL  E   L +T Y
Sbjct: 77  ITKQTKQKILKEAIITILVTKKVNPTAHPDFAKSFGKCIELIWGYRQLCVECEELRKTPY 136

Query: 317 DAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHF 376
           DA+N+EHE +LL+LW +L P  PL++RVTKQWQ IGFQGDDPKTDFRGMGILGL+NL++F
Sbjct: 137 DADNSEHEFQLLKLWNLLMPYEPLDARVTKQWQHIGFQGDDPKTDFRGMGILGLENLVYF 196

Query: 377 ASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINV 436
           A EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D +AKT +YNS K  P+I  
Sbjct: 197 AQEYPSAATHVLSHSTHPRYGYAFAIVGINLTSMALRLLRDGSAKTHIYNSSKGFPTIRA 256

Query: 437 FHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV 493
           FH  YCYLFYEFD  W++SKP  +M+FS+++ KFEN+IR  L++SS + + ++SID V
Sbjct: 257 FHQLYCYLFYEFDGFWIDSKPSNMMEFSSIQEKFENSIRMALTDSSTVFRINISIDNV 314

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018496|gb|EGI59086.1| ELMO domain-containing protein 2 [Acromyrmex echinatior]

 Score =  362 bits (928), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 168/299 (56%), Positives = 219/299 (73%), Gaps = 1/299 (0%)

Query: 194 YVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAV 253
           Y RPL KW L  TT++CELQRICYG+  GA R+  VE +L  SR   ++ L+ +LN +A 
Sbjct: 12  YFRPLIKWFLHHTTQMCELQRICYGQPSGAPRAFAVEETLEQSRNANIRTLVAYLNDIAD 71

Query: 254 ERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLAR 313
            R++        ++ ++ T+L+ KKINPT H  F K   +C+E IWGYRQL  E   L +
Sbjct: 72  HRRITTKTERKILEDAIRTVLVTKKINPTAHPDFAKMFGKCVELIWGYRQLCVECEELRK 131

Query: 314 TQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNL 373
           T Y A+N EHE+KLL+LW +L P  PL++RVTKQWQ IGFQGDDPKTDFRGMGILGL+NL
Sbjct: 132 TPYSADNLEHEQKLLKLWNLLMPYEPLDTRVTKQWQEIGFQGDDPKTDFRGMGILGLENL 191

Query: 374 LHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPS 433
           ++FA EYP  A HVL HS HP+YGYAFAIVGINLTS+A  L +D +AKT +YNS K+LP+
Sbjct: 192 VYFAQEYPGMAMHVLSHSNHPRYGYAFAIVGINLTSMALKLLRDGSAKTHIYNSSKTLPT 251

Query: 434 INVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLLKTDLSID 491
           I  FH FYCYLFYEFD  W+ESKP  +M+FS+++ KFEN+IR  L+N S + + ++++D
Sbjct: 252 IRAFHQFYCYLFYEFDGFWIESKPSNMMEFSSIQEKFENSIRIALANPSTVFRINVAVD 310

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493243|ref|XP_003427029.1| PREDICTED: ELMO domain-containing protein 2-like [Nasonia vitripennis]

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 177/314 (56%), Positives = 230/314 (73%), Gaps = 5/314 (1%)

Query: 179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRR 238
           MF Y+    +S+   Y+RP  KWILR TT +CELQRICYGE  GA R+  VEYSL  SR 
Sbjct: 1   MFRYI----WSLISWYLRPFIKWILRHTTHMCELQRICYGEPSGAPRTYAVEYSLRLSRN 56

Query: 239 YELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHI 298
            +++ L+ +L+ +A +R +      + ++ ++ T+L+ KKINPT H  F KA  +C+E I
Sbjct: 57  PDIKSLLSYLDDIANQRGITVRSERVMLEEAIRTVLITKKINPTAHPDFAKAFGKCVELI 116

Query: 299 WGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDP 358
           WGYRQL  E   L +T YD+EN  HE  LL+LW +L P  PL +R+TKQWQ IGFQGDDP
Sbjct: 117 WGYRQLCVECEELRQTPYDSENQAHEGLLLKLWDLLMPYDPLEARITKQWQDIGFQGDDP 176

Query: 359 KTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD 418
           KTDFRGMG+LGL+NL++FA EYP+ A HVL HS+HP+YGYAFAIVGINLTS+A  L +D 
Sbjct: 177 KTDFRGMGMLGLENLVYFAKEYPSAATHVLSHSMHPRYGYAFAIVGINLTSMALRLLKDG 236

Query: 419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLL 477
           +AKT +YNS K+LPSI  FH FYCYLFYEFD  W+ESKP  +M+FS+++ KFENNIR  L
Sbjct: 237 SAKTHIYNSSKTLPSIRAFHQFYCYLFYEFDGFWIESKPSNIMEFSSIQEKFENNIRMAL 296

Query: 478 SNSSVLLKTDLSID 491
           +N S + + +LS+D
Sbjct: 297 ANPSTVFRINLSVD 310

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855956|ref|XP_003703476.1| PREDICTED: ELMO domain-containing protein 2-like [Megachile rotundata]

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 176/316 (55%), Positives = 231/316 (73%), Gaps = 5/316 (1%)

Query: 179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRR 238
           MF Y     +S+ + Y RP+ KW+LR+TT++CELQRICYGE  GARR+L +E SL  SR 
Sbjct: 1   MFVYF----WSLVWWYFRPVIKWLLRQTTQMCELQRICYGEPSGARRTLAIEQSLKLSRN 56

Query: 239 YELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHI 298
             ++ L+  LN +A +  +        ++ ++ T+L+ KKINPT H  F K+  +CIE I
Sbjct: 57  ANIKTLVAHLNDLADQHAITTKTERKILEEAIRTVLVTKKINPTAHPDFAKSFGKCIELI 116

Query: 299 WGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDP 358
           WGYRQL  E   L +T YDA+N EHE  LL+LW +L P  PL++RVTKQWQ IGFQGDDP
Sbjct: 117 WGYRQLCMECEELRKTPYDADNPEHELLLLKLWNLLMPYEPLDARVTKQWQEIGFQGDDP 176

Query: 359 KTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD 418
           KTDFRGMGILGL+NL++FA EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D 
Sbjct: 177 KTDFRGMGILGLENLVYFAQEYPSAATHVLSHSTHPRYGYAFAIVGINLTSMALRLLRDG 236

Query: 419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLL 477
            AKT +YNS K+LP+I  FH FYCYLFYEFD  W++SKP  +M+FS+++ KFEN+IR  L
Sbjct: 237 TAKTHIYNSSKTLPTIRAFHQFYCYLFYEFDGFWIDSKPSNMMEFSSIQEKFENSIRMAL 296

Query: 478 SNSSVLLKTDLSIDIV 493
           ++SS + + ++S+D V
Sbjct: 297 ADSSTVFRINISVDNV 312

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717767|ref|XP_003397347.1| PREDICTED: ELMO domain-containing protein 2-like isoform 1 [Bombus terrestris]

 Score =  354 bits (908), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 179/316 (56%), Positives = 229/316 (72%), Gaps = 5/316 (1%)

Query: 179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRR 238
           MF Y     +S+   Y RP+ KW+LR TTR+CELQRICYGE  GA R+L VE SL  SR 
Sbjct: 1   MFIYF----WSLVCWYFRPIVKWLLRHTTRMCELQRICYGELPGAPRTLAVEESLKLSRN 56

Query: 239 YELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHI 298
             ++ LI +LN +A +R +        +K ++ TIL+ KK+NPT H  F K+  +CIE I
Sbjct: 57  ANIKTLIVYLNDLADQRAITKQTKQKILKEAIITILVTKKVNPTAHPDFAKSFGKCIELI 116

Query: 299 WGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDP 358
           WGYRQL  E   L +T YDA+N+EHE  LL+LW +L P  PL++RVTKQWQ IGFQGDDP
Sbjct: 117 WGYRQLCVECEELRKTPYDADNSEHEFLLLKLWNLLMPYEPLDARVTKQWQHIGFQGDDP 176

Query: 359 KTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD 418
           KTDFRGMGILGL+NL++FA EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D 
Sbjct: 177 KTDFRGMGILGLENLVYFAQEYPSAATHVLSHSTHPRYGYAFAIVGINLTSMALRLLRDG 236

Query: 419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLL 477
           +AKT +YNS K  P+I  FH  YCYLFYEFD  W++SKP  +M+FS+++ KFEN+IR  L
Sbjct: 237 SAKTHIYNSSKGFPTIRAFHQLYCYLFYEFDGFWIDSKPSNMMEFSSIQEKFENSIRMAL 296

Query: 478 SNSSVLLKTDLSIDIV 493
           ++SS + + ++SID V
Sbjct: 297 TDSSTVFRINISIDNV 312

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717769|ref|XP_003397348.1| PREDICTED: ELMO domain-containing protein 2-like isoform 2 [Bombus terrestris]

 Score =  351 bits (900), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 173/298 (58%), Positives = 221/298 (74%), Gaps = 1/298 (0%)

Query: 197 PLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERK 256
           P+ KW+LR TTR+CELQRICYGE  GA R+L VE SL  SR   ++ LI +LN +A +R 
Sbjct: 16  PIVKWLLRHTTRMCELQRICYGELPGAPRTLAVEESLKLSRNANIKTLIVYLNDLADQRA 75

Query: 257 LHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQY 316
           +        +K ++ TIL+ KK+NPT H  F K+  +CIE IWGYRQL  E   L +T Y
Sbjct: 76  ITKQTKQKILKEAIITILVTKKVNPTAHPDFAKSFGKCIELIWGYRQLCVECEELRKTPY 135

Query: 317 DAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHF 376
           DA+N+EHE  LL+LW +L P  PL++RVTKQWQ IGFQGDDPKTDFRGMGILGL+NL++F
Sbjct: 136 DADNSEHEFLLLKLWNLLMPYEPLDARVTKQWQHIGFQGDDPKTDFRGMGILGLENLVYF 195

Query: 377 ASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSLPSINV 436
           A EYP+ A HVL HS HP+YGYAFAIVGINLTS+A  L +D +AKT +YNS K  P+I  
Sbjct: 196 AQEYPSAATHVLSHSTHPRYGYAFAIVGINLTSMALRLLRDGSAKTHIYNSSKGFPTIRA 255

Query: 437 FHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDIV 493
           FH  YCYLFYEFD  W++SKP  +M+FS+++ KFEN+IR  L++SS + + ++SID V
Sbjct: 256 FHQLYCYLFYEFDGFWIDSKPSNMMEFSSIQEKFENSIRMALTDSSTVFRINISIDNV 313

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173769|gb|EFN64556.1| ELMO domain-containing protein 2 [Camponotus floridanus]

 Score =  348 bits (892), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 170/314 (54%), Positives = 226/314 (71%), Gaps = 5/314 (1%)

Query: 179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRR 238
           MF Y   +W  VY+ Y RP  KW LR TT++CELQRICYG+  GA R+  +E SL  SR 
Sbjct: 1   MFKY---IWTLVYW-YFRPFVKWFLRHTTQMCELQRICYGQPSGAPRAFAIEESLKQSRN 56

Query: 239 YELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHI 298
             ++ L+ +LN +A +R++        ++ ++ T+L+ K INPT H +F K+  +C+E I
Sbjct: 57  ANIRTLVAYLNDIADQRRITTKTERKILEDAIKTVLVTKNINPTAHPTFAKSFGKCVELI 116

Query: 299 WGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDP 358
           WGYRQL  E   L +T Y  EN +HE+ LL+LW +L P   L +RVTKQWQ IGFQGDDP
Sbjct: 117 WGYRQLCVECEELRKTSYSPENPDHEQLLLKLWSLLMPYESLEARVTKQWQKIGFQGDDP 176

Query: 359 KTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD 418
           KTDFRGMGILGL+NL++FA EYP+TA HVL HS HP+YGYAFAIVGINLTS+A  L +D 
Sbjct: 177 KTDFRGMGILGLENLVYFAQEYPSTATHVLSHSNHPRYGYAFAIVGINLTSMALKLLRDG 236

Query: 419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLL 477
           +AKT +YNS K+LP I  FH FYCYLFY+FD  W+ESKP  +M+FS+++ KFEN+IR  L
Sbjct: 237 SAKTHIYNSSKTLPMIRAFHQFYCYLFYQFDGFWIESKPSNMMEFSSIQEKFENSIRMAL 296

Query: 478 SNSSVLLKTDLSID 491
           +N S + + ++++D
Sbjct: 297 ANPSTVFRINVAVD 310

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	493
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.608	0.949	0.485	2.7e-75
UNIPROTKB|E1C0P7	303	ELMOD1 "Uncharacterized protei	0.565	0.920	0.446	2.1e-61
ZFIN|ZDB-GENE-070112-262	328	elmod1 "ELMO/CED-12 domain con	0.413	0.621	0.441	5.4e-61
MGI|MGI:3583900	326	Elmod1 "ELMO/CED-12 domain con	0.409	0.619	0.443	8.8e-61
UNIPROTKB|E1C592	297	ELMOD2 "Uncharacterized protei	0.576	0.956	0.426	1.5e-60
UNIPROTKB|Q8IZ81	293	ELMOD2 "ELMO domain-containing	0.576	0.969	0.423	5e-60
RGD|1564186	320	Elmod1 "ELMO/CED-12 domain con	0.387	0.596	0.443	6.1e-60
UNIPROTKB|Q0IIE6	326	ELMOD1 "ELMO domain-containing	0.411	0.622	0.431	7.8e-60
UNIPROTKB|Q8N336	334	ELMOD1 "ELMO domain-containing	0.409	0.604	0.438	9.9e-60
UNIPROTKB|Q5NVD7	326	ELMOD1 "ELMO domain-containing	0.409	0.619	0.438	9.9e-60

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 149/307 (48%), Positives = 197/307 (64%)

Query:   192 FSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKM 251
             FSY+RP  KW L   TRL ELQRICYG   GA R+  VE SL+ S+R +++ L+  L++ 
Sbjct:    12 FSYIRPFIKWFLHAFTRLSELQRICYGAKAGASRTSQVERSLTLSKRPQIRRLVLDLDEA 71

Query:   252 AVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLL 311
             A    +    L+     +   ++  K+I   VH  F +    C+  IWGYR+L  ++  L
Sbjct:    72 APY--VSNAELLDFAPRAARIVMQAKRIKNNVHPDFARLFGTCVTSIWGYRRLMHQVEQL 129

Query:   312 ARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLD 371
                +YD++N +HE+KLLRLWQ+L PD PL  RVTKQWQ IGFQGDDPKTDFRGMG+LGL+
Sbjct:   130 RAEKYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTDFRGMGMLGLE 189

Query:   372 NLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSC--- 428
             NLL+FA+ Y   A+HVL HS+HP  GY +AIVGINLTS+A++L +  AAKT  YN     
Sbjct:   190 NLLYFATAYNDAAKHVLLHSMHPTLGYTYAIVGINLTSMAFNLVKTGAAKTHFYNLVVQH 249

Query:   429 -KSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLLKT 486
              +   ++  FH  YCYLF+EFDR WMES P  +MDF  +   FE      L N S + KT
Sbjct:   250 RQDFSTVEDFHKLYCYLFFEFDRFWMESDPRNIMDFREIYQSFEITKLEALHNDSTIFKT 309

Query:   487 DLSIDIV 493
             +L ++ V
Sbjct:   310 NLVVESV 316

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

UNIPROTKB|E1C0P7 ELMOD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 134/300 (44%), Positives = 186/300 (62%)

Query:   190 VYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIK 246
             +YF Y + L+   K+++RK T  CELQRICY    GA R++ +E SL  S+   LQ  + 
Sbjct:     7 LYF-YCKCLWRCLKFVVRKLTGRCELQRICYNTKPGAARTMKIEASLKGSKSKRLQTSVS 65

Query:   247 FLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQ 306
              ++  A+E+             ++D I+ +KKINP ++     ++  C+  I GYR L  
Sbjct:    66 -VHPDAIEK-------------TIDDIMELKKINPDINPQLGVSLQACLLQIVGYRNLIV 111

Query:   307 EITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMG 366
             E+  L R  YD+EN +HEE LL+LW+ LKP+ PL +R++KQW  IGFQGDDPKTDFRGMG
Sbjct:   112 EVEKLRREPYDSENLQHEEMLLKLWKCLKPNSPLKARISKQWCEIGFQGDDPKTDFRGMG 171

Query:   367 ILGLDNLLHFASEYPT-TAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
             +LGL NL++FA E+ T  AQ VL  SLHP+Y Y+FAIVGIN+T LAY+L    A KT  Y
Sbjct:   172 LLGLYNLVYFA-EWDTEVAQQVLSDSLHPKYSYSFAIVGINITDLAYNLLVSGALKTHFY 230

Query:   426 NSCKSLPSINVFHHFYCYLFYEFDRVWMESKPC-VMDFSNVKTKFENNIRSLLSNSSVLL 484
             N     P++  F   +CYL +EF + W+E  P  +M+F+ V+ KF   I   L N  + L
Sbjct:   231 NVAPEAPTLTHFQQTFCYLMHEFHKFWIEEDPLDIMEFNRVREKFHKRILKQLQNPEMAL 290

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-070112-262 elmod1 "ELMO/CED-12 domain containing 1" [Danio rerio (taxid:7955)]

 Score = 426 (155.0 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
 Identities = 98/222 (44%), Positives = 133/222 (59%)

Query:   179 MFYYLRPVWYSVYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGV-EYSLS 234
             M ++LR +   + F Y + L+   K+++RK T  CELQRICY    GARR+L + E SL 
Sbjct:     1 MKHFLRVLTQFLVFLYCKCLWRGLKFVIRKVTGRCELQRICYNNKPGARRTLKIAESSLR 60

Query:   235 HSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRC 294
              S+   LQ  I           +H +    SV+ S+D I+ +KKIN   +     ++  C
Sbjct:    61 CSKHELLQSAIS----------VHPD----SVEKSIDDIMALKKINLDTNPQLGISLQAC 106

Query:   295 IEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQ 354
             +  I GYR L  E+  L R  YD EN  HEE L++LW+ L+PD PL+ R++KQW  IGFQ
Sbjct:   107 LLQIVGYRNLVVEVEKLRREPYDCENPAHEEMLMKLWKELRPDSPLSGRISKQWCEIGFQ 166

Query:   355 GDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQY 396
             G+DPKTDFRGMG+LGL NLL+FA     TA  VL  SL P++
Sbjct:   167 GNDPKTDFRGMGLLGLHNLLYFAEHDKATALQVLHDSLQPKH 208

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:3583900 Elmod1 "ELMO/CED-12 domain containing 1" [Mus musculus (taxid:10090)]

 Score = 444 (161.4 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
 Identities = 98/221 (44%), Positives = 139/221 (62%)

Query:   179 MFYYLRP-VWYSVYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGVEYSLS 234
             M ++LR  +   +YF Y + L+   K+++RK T  CELQRICYG   GA R++ +E SL 
Sbjct:     1 MKHFLRMLIQVCLYF-YCKFLWRCMKFVMRKLTGRCELQRICYGTKPGASRTMKIETSLR 59

Query:   235 HSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRC 294
              S+   LQ  +  ++  A+E+             ++D I+ +KKINP ++     ++  C
Sbjct:    60 DSKSKLLQTSVS-VHPDAIEK-------------TIDDIMELKKINPDINPQLGISLQAC 105

Query:   295 IEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQ 354
             +  I GYR L  ++  L R  YD++N +HEE LL+LW++LKP+ PL SRV+KQW  IGFQ
Sbjct:   106 LLQIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQ 165

Query:   355 GDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ 395
             GDDPKTDFRGMG+LGL NL +FA    T AQ VL  S+HP+
Sbjct:   166 GDDPKTDFRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPK 206

GO:0005096 "GTPase activator activity" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=ISO

UNIPROTKB|E1C592 ELMOD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 128/300 (42%), Positives = 179/300 (59%)

Query:   186 VWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELI 245
             +W  +Y SY R   KW+ R  T  CELQR+  G   GARR+LG+E SL  S+   L+   
Sbjct:     5 LWGFLYSSYFRFWLKWLWRLLTGKCELQRVFEGAKEGARRTLGIERSLGSSKSKVLRNA- 63

Query:   246 KFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLK 305
               LN    E           ++  V  ++  KKI     + F   +   +  I GY++L 
Sbjct:    64 --LNADETE-----------IEKCVRDVMKEKKIEQK-DIRFKTNLHMSLLQITGYKKLY 109

Query:   306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
              ++  L +  YD++N EHEE+L+ LW +L P   L +R+TKQW  IGFQGDDPKTDFRGM
Sbjct:   110 LDVENLRKVTYDSDNEEHEEQLIELWNLLMPHENLKARITKQWCDIGFQGDDPKTDFRGM 169

Query:   366 GILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
             G+LGL NL++F+  Y   A+ +L HS HP+ GY++AIVGINLT +AY L ++ A K+ +Y
Sbjct:   170 GLLGLVNLVYFSKHYTNEARQILSHSNHPKLGYSYAIVGINLTEMAYSLLKNGALKSHLY 229

Query:   426 NSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVLL 484
             N    LP +  FH FYCYL YEFD+ W E +P  +M F+  + KF + I+ LL +  V+L
Sbjct:   230 NMVPGLPQMEHFHQFYCYLVYEFDKFWFEEEPESIMHFNQYREKFHDKIKGLLLDYDVIL 289

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0050688 "regulation of defense response to virus" evidence=IEA

UNIPROTKB|Q8IZ81 ELMOD2 "ELMO domain-containing protein 2" [Homo sapiens (taxid:9606)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 127/300 (42%), Positives = 183/300 (61%)

Query:   186 VWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELI 245
             +W   Y  + R   KW+LR+ T  CELQRI +    GA+R+  +E SL++S+        
Sbjct:     5 LWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTYSK-------- 55

Query:   246 KFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLK 305
                NK+ +++  H   +   V   VD I+  K INP    SF   +  C+  I GY+QL 
Sbjct:    56 ---NKV-LQKATHV--VQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLY 109

Query:   306 QEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGM 365
              ++  + +  YD++N +HEE L++LW +L P   LN+R++KQW  IGFQGDDPKTDFRGM
Sbjct:   110 LDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGM 169

Query:   366 GILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVY 425
             GILGL NL++F+  Y + A  +L  S HP+ GY++AIVGINLT +AY L + +A K  +Y
Sbjct:   170 GILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKFHLY 229

Query:   426 NSCKSLPSINVFHHFYCYLFYEFDRVWMESKP-CVMDFSNVKTKFENNIRSLLSNSSVLL 484
             N    +P++  FH FYCYL YEFD+ W E +P  +M F+  + KF   I+ LL + +V L
Sbjct:   230 NLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLDCNVAL 289

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0051607 "defense response to virus" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IDA

GO:0050688 "regulation of defense response to virus" evidence=IDA

GO:0043547 "positive regulation of GTPase activity" evidence=IDA

RGD|1564186 Elmod1 "ELMO/CED-12 domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 436 (158.5 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
 Identities = 91/205 (44%), Positives = 128/205 (62%)

Query:   191 YFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNK 250
             Y  ++    K+++RK T  CELQRICYG   GA R++ +E SL  S+   LQ  +  ++ 
Sbjct:    10 YCKFLWRCMKFVMRKLTGRCELQRICYGTKPGASRTMKIETSLRDSKSKLLQTSVS-VHP 68

Query:   251 MAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITL 310
              A+E+             ++D I+ +KKINP ++     ++  C+  I GYR L  ++  
Sbjct:    69 DAIEK-------------TIDDIMELKKINPDINPQLGISLQACLLQIVGYRNLIADVEK 115

Query:   311 LARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGL 370
             L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQGDDPKTDFRGMG+LGL
Sbjct:   116 LRREPYDSDNPQHEEMLLKLWEFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGL 175

Query:   371 DNLLHFASEYPTTAQHVLQHSLHPQ 395
              NL +FA    T AQ VL  S+HP+
Sbjct:   176 YNLQYFAERDATVAQQVLCDSVHPK 200

GO:0005096 "GTPase activator activity" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q0IIE6 ELMOD1 "ELMO domain-containing protein 1" [Bos taurus (taxid:9913)]

 Score = 435 (158.2 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
 Identities = 95/220 (43%), Positives = 134/220 (60%)

Query:   179 MFYYLRPVWYSVYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGVEYSLSH 235
             M ++LR +     F Y + L+   K+++RK T  CELQRICY    GA R++ +E SL  
Sbjct:     1 MKHFLRMLIQVCLFFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 60

Query:   236 SRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCI 295
             S+   LQ  +  ++  A+E+             ++D I+ +KKINP ++     ++  C+
Sbjct:    61 SKSKLLQTSVS-VHPDAIEK-------------TIDDIMELKKINPDINPQLGISLQACL 106

Query:   296 EHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQG 355
               I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQG
Sbjct:   107 LQIVGYRNLIADVEKLRRESYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQG 166

Query:   356 DDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ 395
             DDPKTDFRGMG+LGL NL +FA      AQ VL  SLHP+
Sbjct:   167 DDPKTDFRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPK 206

GO:0005096 "GTPase activator activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

UNIPROTKB|Q8N336 ELMOD1 "ELMO domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 434 (157.8 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 97/221 (43%), Positives = 137/221 (61%)

Query:   179 MFYYLRP-VWYSVYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGVEYSLS 234
             M ++LR  +   +YF Y + L+   K+++RK T  CELQRICY    GA R++ +E SL 
Sbjct:     1 MKHFLRMLIQVCLYF-YCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLR 59

Query:   235 HSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRC 294
              S+   LQ  +  ++  A+E+             +++ I+ +KKINP V+     ++  C
Sbjct:    60 DSKSKLLQTSVS-VHPDAIEK-------------TIEDIMELKKINPDVNPQLGISLQAC 105

Query:   295 IEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQ 354
             +  I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQ
Sbjct:   106 LLQIVGYRNLIADVEKLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQ 165

Query:   355 GDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ 395
             GDDPKTDFRGMG+LGL NL +FA    T AQ VL  SLHP+
Sbjct:   166 GDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPK 206

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IDA

GO:0043547 "positive regulation of GTPase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|Q5NVD7 ELMOD1 "ELMO domain-containing protein 1" [Pongo abelii (taxid:9601)]

 Score = 434 (157.8 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 97/221 (43%), Positives = 137/221 (61%)

Query:   179 MFYYLRP-VWYSVYFSYVRPLF---KWILRKTTRLCELQRICYGENHGARRSLGVEYSLS 234
             M ++LR  +   +YF Y + L+   K+++RK T  CELQRICY    GA R++ +E SL 
Sbjct:     1 MKHFLRMLIQVCLYF-YCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLR 59

Query:   235 HSRRYELQELIKFLNKMAVERKLHGNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRC 294
              S+   LQ  +  ++  A+E+             +++ I+ +KKINP V+     ++  C
Sbjct:    60 DSKSKLLQTSVS-VHPDAIEK-------------TIEDIMELKKINPDVNPQLGISLQAC 105

Query:   295 IEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQ 354
             +  I GYR L  ++  L R  YD++N +HEE LL+LW+ LKP+ PL SR++KQW  IGFQ
Sbjct:   106 LLQIVGYRNLIADVEKLRREPYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQ 165

Query:   355 GDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQ 395
             GDDPKTDFRGMG+LGL NL +FA    T AQ VL  SLHP+
Sbjct:   166 GDDPKTDFRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPK 206

GO:0005096 "GTPase activator activity" evidence=ISS

GO:0043547 "positive regulation of GTPase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	493
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	4e-61

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  197 bits (503), Expect = 4e-61
 Identities = 71/170 (41%), Positives = 97/170 (57%), Gaps = 5/170 (2%)

Query: 303 QLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDF 362
                +  L +T +D EN EH   L  LW+ L PD PL+SRV+++W+ +GFQGDDP TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 363 RGMGILGLDNLLHFASEYPTTAQHVLQHSLHP--QYGYAFAIVGINLTSLAYHLFQDDAA 420
           RG G+LGL NLL+FA  YP   Q +L  S H   ++ Y FA+  IN+TS+ Y L +    
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 421 KTIVYNSCKSL---PSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKT 467
               Y +       P++  F   YC LF+ FDR W E +  +MDF+ V  
Sbjct: 121 DQEDYKNYGFPLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	493
KOG2998|consensus	302		100.0
KOG3458|consensus	170		100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999|consensus	713		99.9
PF06747	35	CHCH: CHCH domain; InterPro: IPR010625 A conserved	97.56
PF08583	69	Cmc1: Cytochrome c oxidase biogenesis protein Cmc1	89.99

>KOG2998|consensus

Probab=100.00  E-value=5.6e-74  Score=568.31  Aligned_cols=297  Identities=38%  Similarity=0.601  Sum_probs=282.5

Q ss_pred             HHHHhcccchhHHHHhhhhHHHHHHHhhcchhHHHHHhhCCCCCCchhHHHHHHHhhhccHHHHHHHHHhhHHHHhhhhc
Q psy16482        179 MFYYLRPVWYSVYFSYVRPLFKWILRKTTRLCELQRICYGENHGARRSLGVEYSLSHSRRYELQELIKFLNKMAVERKLH  258 (493)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~Kw~lr~~T~~cElqRIc~~~~~ga~rt~~iE~Sl~~sk~~~~~~~~~~~~~~~~~~~~~  258 (493)
                      |+...|.   ++|.+++|++.||.+|.+||.|||||||++++.|+.|+.++|.|+..+|....+++.++.+..       
T Consensus         2 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~lq~~~~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~-------   71 (302)
T KOG2998|consen    2 RLSAGYE---PFYDKSVRAFDKWPLSELKGHGELQRICTDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPG-------   71 (302)
T ss_pred             cchhhhh---hHHHHHHHHHhcccHHHHcCchHHHHHHhcCCCCCcceeecchhhhhhhhhhhcccccccChh-------
Confidence            3466677   999999999999999999999999999999999999999999999999998888888877766       


Q ss_pred             CCCcccchhhHHHHHHHhhCCCCCCCccHHHHHHHHHHHhhhHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHhCCCC
Q psy16482        259 GNGLMMSVKGSVDTILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDAENAEHEEKLLRLWQMLKPDV  338 (493)
Q Consensus       259 ~~~~~~~~~~~~~~i~~~K~I~~~~~~~f~~~l~~cL~qi~gy~~L~~~ve~l~~~~~D~~n~~H~~lL~~Lw~~l~p~~  338 (493)
                             ....++.||..|+|++..+.++...+..|..++.||+++...++++|++|||++|++|+++|++||++++|++
T Consensus        72 -------~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~~~~~~yDs~n~~H~e~L~~lwk~~~p~~  144 (302)
T KOG2998|consen   72 -------LISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEELRQEPYDSDNPDHEELLLDLWKLLYPDK  144 (302)
T ss_pred             -------hhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHhCCCC
Confidence                   3445566999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccccccccCCCCCCCccccchhhhHhhHHHHHhhChHHHHHHHHhhcCCCCccchhhHHHHHHHHHHHHhhhc
Q psy16482        339 PLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTAQHVLQHSLHPQYGYAFAIVGINLTSLAYHLFQDD  418 (493)
Q Consensus       339 ~~~~r~s~~W~~IGFQg~DP~TDFRG~GlLGL~nLlyF~~~~~~~a~~il~~S~~~~~~yPFAivgINIT~ll~~lLk~g  418 (493)
                      ++++++|+||++|||||+||+|||||||+|||+||+||+++||+.|+++|.+|.||..+|||||||||||+|++++|+.|
T Consensus       145 ~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~s~~~r~eYpfAVvgINIT~m~~qmL~~e  224 (302)
T KOG2998|consen  145 ELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLKSRHPRWEYPFAVVGINITFMAIQMLDLE  224 (302)
T ss_pred             ccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHhcCCCccCCceEEEeecHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCChhhhHHHHHHHHHHHHHHHHhhCCCCccchHHHHHHHHHHHHHHhcCCCceeeecccccC
Q psy16482        419 AAKTIVYNSCKSLPSINVFHHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLKTDLSIDI  492 (493)
Q Consensus       419 ~l~~~fyN~~~~~~~~~~F~eLyc~~F~~Fd~~W~e~~~timDF~~V~~~fr~~i~~~L~~~~~~l~~~~~~~~  492 (493)
                      ++++++||....++++.+|+.|||++|.+||++|.+++++|||||.|++.|+.++++.|.+.++.+..++++.+
T Consensus       225 al~~~~~~~~~~~~~~~~F~~lYc~af~~~d~~Wl~~~~simefn~Vlk~~~~qler~L~~~d~~~~~~lp~~~  298 (302)
T KOG2998|consen  225 ALKKHFNNIVKVFETEPAFDLLYCYAFLEFDKQWLEQRATIMEFNTVLKSFRRQLERELSLDDVLLITDLPAFN  298 (302)
T ss_pred             hccccccccccccccHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhhhhhhhcccccchhhh
Confidence            99999999877789999999999999999999999999999999999999999999999999999999987654

>KOG3458|consensus

Probab=100.00  E-value=3.3e-63  Score=446.02  Aligned_cols=168  Identities=49%  Similarity=0.814  Sum_probs=162.3

Q ss_pred             cccccCCCCccCCCCCccCCchhhHhhhchHhhhhchhhhhhhhcccCcCCCcchhHHhCcchhhhHHHHHHHHHhhcHH
Q psy16482          3 LTHNFSLPTYEELEQEEVPLSSAALKAGAFHFGKTCELENNEFVLCRQELNDPRKCITEGKAVTSCALSFFRKVKESCFD   82 (493)
Q Consensus         3 ~~~~~~~p~~~el~v~e~~~ssa~L~aaa~~~g~~C~~~n~~FmlCk~e~~dP~~CL~eG~~Vt~Ca~~~~~~i~~~C~~   82 (493)
                      +|++++||+++||||+||++|||+|+|+|+|||++|+++|+|||+||+|+.|||+||+||++||+||++|||+||.+|.+
T Consensus         1 it~~te~ps~~eltv~ei~lSsavLkA~A~h~g~~Ceken~eFmlcrke~~dPr~cL~eGk~vT~C~l~flr~lkr~C~~   80 (170)
T KOG3458|consen    1 ITKDTELPSAEELTVQEIPLSSAVLKASAKHIGKQCEKENNEFMLCRKEDPDPRACLEEGKAVTRCALDFLRDLKRSCLE   80 (170)
T ss_pred             CCCcccCcchhhcccccccccHHHHHHhhHHHHHhhchhhHHHHhHhhcCCCHHHHHHhchHHHHHHHHHHHHHHHHhhH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccCCCCcccccCchhhHHHHHHHHHhcCCCCCCCCcccCccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy16482         83 EFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLGIDRPVYNYFLRPFVHDSNRPKPKPSDPLVFSGVPKKLDDNEPR  162 (493)
Q Consensus        83 ef~~~~~Cld~~~~~~~~~~CRk~q~~~~~C~~~~l~~~r~~~g~~~~~~~~~~~rp~p~~~~~~~~~~~~~~~~~~~~~  162 (493)
                      ||++||+||||++ +++|++|||+|++||+|+.+||||.||.+|||||++|++|+||.|+++....+||+.|.+|.|.+ 
T Consensus        81 e~~~y~~C~dyss-t~~f~~Crk~Q~~fdkcv~~kl~w~RP~lGyfSk~~v~~sar~aPe~~~k~~~pd~~pelp~Dy~-  158 (170)
T KOG3458|consen   81 EFTKYATCMDYSS-TNEFSHCRKEQEAFDKCVPDKLNWTRPKLGYFSKLHVYDSARAAPEVKYKAEAPDVLPELPADYH-  158 (170)
T ss_pred             HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHhHhhcCCCCccccccceeeeeeccccCCCCccccCCCCCCCCCCcccC-
Confidence            9999999999998 46899999999999999999999999999999999999999999999988889999888887766 


Q ss_pred             CCCCCCCcccc
Q psy16482        163 TPAKYGGRNHG  173 (493)
Q Consensus       163 ~~~~~~~~~~~  173 (493)
                       |||||||||-
T Consensus       159 -pakygsrfy~  168 (170)
T KOG3458|consen  159 -PAKYGSRFYN  168 (170)
T ss_pred             -ccccCceeee
Confidence             9999999984

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=2.5e-45  Score=342.52  Aligned_cols=163  Identities=42%  Similarity=0.756  Sum_probs=151.8

Q ss_pred             HHHHHHHhcccCCCCCHHHHHHHHHHHHHhCCCCCCCccccccccccccCCCCCCCccccchhhhHhhHHHHHhhChHHH
Q psy16482        305 KQEITLLARTQYDAENAEHEEKLLRLWQMLKPDVPLNSRVTKQWQTIGFQGDDPKTDFRGMGILGLDNLLHFASEYPTTA  384 (493)
Q Consensus       305 ~~~ve~l~~~~~D~~n~~H~~lL~~Lw~~l~p~~~~~~r~s~~W~~IGFQg~DP~TDFRG~GlLGL~nLlyF~~~~~~~a  384 (493)
                      +..|..++++|||++|++|+++|++||++++|+.+.+++.+++|+.|||||+||+|||||+|+|||.||+||+++|++.+
T Consensus         3 l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~~   82 (170)
T PF04727_consen    3 LNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDEF   82 (170)
T ss_pred             HHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHHH
Confidence            35678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCC--CccchhhHHHHHHHHHHHHhhhcccccccccccC---CCChhhhHHHHHHHHHHHHHHHHhhCCCCc
Q psy16482        385 QHVLQHSLHPQ--YGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCK---SLPSINVFHHFYCYLFYEFDRVWMESKPCV  459 (493)
Q Consensus       385 ~~il~~S~~~~--~~yPFAivgINIT~ll~~lLk~g~l~~~fyN~~~---~~~~~~~F~eLyc~~F~~Fd~~W~e~~~ti  459 (493)
                      ++|+.++.++.  .+||||++|||||.+++++|+.|.++.+++....   .++.+.+|++|||++|..|+++|+++++++
T Consensus        83 ~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~at~  162 (170)
T PF04727_consen   83 RRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSEFYKRINFLSFFSSLEAFEELFCACFQLFDRTWKEMNATI  162 (170)
T ss_pred             HHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHHHhhcccccccCccHHHHHHHHHHHHHHHHHHHccCCCCH
Confidence            99999998766  8999999999999999999999998877555321   478899999999999999999999999999


Q ss_pred             cchHHHHH
Q psy16482        460 MDFSNVKT  467 (493)
Q Consensus       460 mDF~~V~~  467 (493)
                      |||++|++
T Consensus       163 ~dF~~V~~  170 (170)
T PF04727_consen  163 MDFNKVLK  170 (170)
T ss_pred             HHHHhhcC
Confidence            99999974

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999|consensus

Probab=99.90  E-value=1.2e-23  Score=222.75  Aligned_cols=189  Identities=20%  Similarity=0.334  Sum_probs=165.2

Q ss_pred             HhhhHHHHHHHH-HHHhcccCCCCCHHHHHHHHHHHHHhCCCCCC-----------CccccccccccccCC-CCCCCccc
Q psy16482        297 HIWGYRQLKQEI-TLLARTQYDAENAEHEEKLLRLWQMLKPDVPL-----------NSRVTKQWQTIGFQG-DDPKTDFR  363 (493)
Q Consensus       297 qi~gy~~L~~~v-e~l~~~~~D~~n~~H~~lL~~Lw~~l~p~~~~-----------~~r~s~~W~~IGFQg-~DP~TDFR  363 (493)
                      |++..|.|...+ +....++.|+.+.+..++++.+...++.++..           ....+...+.+||-. .||+.||-
T Consensus       277 ~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~df~  356 (713)
T KOG2999|consen  277 QLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQDFG  356 (713)
T ss_pred             HHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHhcc
Confidence            677778787665 44557999999999999999999998865322           234567899999999 89999996


Q ss_pred             cc--hhhhHhhHHHHHhhChHHHHHHHHh--hcCCCCccchhhHHHHHHHHHHHHhhhccccccccccc--CCCChhhhH
Q psy16482        364 GM--GILGLDNLLHFASEYPTTAQHVLQH--SLHPQYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSC--KSLPSINVF  437 (493)
Q Consensus       364 G~--GlLGL~nLlyF~~~~~~~a~~il~~--S~~~~~~yPFAivgINIT~ll~~lLk~g~l~~~fyN~~--~~~~~~~~F  437 (493)
                      .+  |+|+|+||+||+++||+.+++|+.+  |+.+++.|||+-++|.+|.|++++|+.|.+..+..|..  ..|.+...|
T Consensus       357 etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~p~E~~~df~pmfFthd~~F  436 (713)
T KOG2999|consen  357 ETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEPPDELDRDFIPMFFTHDTPF  436 (713)
T ss_pred             cCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCCchhhcCccceeeecCCCcH
Confidence            65  9999999999999999999999998  35678999999999999999999999999988766632  256788999


Q ss_pred             HHHHHHHHHHHHHHHhhCCCCccchHHHHHHHHHHHHHHhcCCCceee
Q psy16482        438 HHFYCYLFYEFDRVWMESKPCVMDFSNVKTKFENNIRSLLSNSSVLLK  485 (493)
Q Consensus       438 ~eLyc~~F~~Fd~~W~e~~~timDF~~V~~~fr~~i~~~L~~~~~~l~  485 (493)
                      +||||.+.++|+++|++|+||-.||++|+..+++|+.++|...+..|+
T Consensus       437 ee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~kp~sld  484 (713)
T KOG2999|consen  437 EELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRKPQSLD  484 (713)
T ss_pred             HHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccCCccHH
Confidence            999999999999999999999999999999999999999999888764

>PF06747 CHCH: CHCH domain; InterPro: IPR010625 A conserved motif was identified in the LOC118487 protein was called the CHCH motif

Probab=97.56  E-value=5.2e-05  Score=53.25  Aligned_cols=34  Identities=24%  Similarity=0.715  Sum_probs=30.6

Q ss_pred             cHHHHHHHHhhhccCCCCcccccCchhhHHHHHHHH
Q psy16482         80 CFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMN  115 (493)
Q Consensus        80 C~~ef~~~~~Cld~~~~~~~~~~CRk~q~~~~~C~~  115 (493)
                      |.+|+.+|+.|++.|+.  +.+.||++..+|.+|+.
T Consensus         1 C~~e~~~~~~Cl~~n~~--~~~~C~~~~~~~~~C~~   34 (35)
T PF06747_consen    1 CAEEMKAYLACLKENNF--DWSKCRKEFKAYKECRM   34 (35)
T ss_dssp             THHHHHHHHHHHHCH-S--STCCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHCCC--cHHhhHHHHHHHHHHhh
Confidence            89999999999999875  57889999999999985

Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11 kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation []. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit []. The CHCH domain was previously called DUF657 []. ; PDB: 2ZXT_A 3A3C_A 2L0Y_A 2K3J_A.

>PF08583 Cmc1: Cytochrome c oxidase biogenesis protein Cmc1 like; InterPro: IPR013892 Cmc1 is a metallo-chaperone like protein which is known to localise to the inner mitochondrial membrane in Saccharomyces cerevisiae

Probab=89.99  E-value=0.34  Score=38.63  Aligned_cols=44  Identities=18%  Similarity=0.563  Sum_probs=36.8

Q ss_pred             HHHhhcHHHHHHHHhhhccCCCCcccccCchhhHHHHHHHHHhcC
Q psy16482         75 KVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMNDKLG  119 (493)
Q Consensus        75 ~i~~~C~~ef~~~~~Cld~~~~~~~~~~CRk~q~~~~~C~~~~l~  119 (493)
                      .....|.++.++|.+|...+.. .-++.||++..++++|+.+...
T Consensus         8 ~~~~~C~~~i~~~~~C~~~~~~-~~~~~C~~~~~~m~~Cl~~~~~   51 (69)
T PF08583_consen    8 EAHKKCADEIEAFAECHKDRTF-KFVGKCREEKKAMNECLKEERN   51 (69)
T ss_pred             HHHHHhHHHHHHHHHHHhcchH-HHHHhhhHHHHHHHHHHHHHHh
Confidence            4668999999999999998433 3578999999999999987643

It is essential for full expression of cytochrome c oxidase and respiration []. Cmc1 contains two Cx9C motifs and is able to bind copper(I). Cmc1 is thought to play a role in mitochondrial copper trafficking and transfer to cytochrome c oxidase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	493
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 2e-08
 Identities = 66/445 (14%), Positives = 111/445 (24%), Gaps = 150/445 (33%)

Query: 62  GKAVTSCALSFFRKVKESCFDEFQVY----ANCVDKSSTNFDLTPCRNTQAVFDKCMNDK 117
           GK  T  AL      K  C  +F+++     NC   +S    L   +      D   N  
Sbjct: 162 GK--TWVALDVCLSYKVQCKMDFKIFWLNLKNC---NSPETVLEMLQKLLYQIDP--NWT 214

Query: 118 LGIDRPVYNYFLRPFVHDSN-------RPKPKPSDPLVFSGVPKKLDDNEPRTPAKYGGR 170
              D    N  LR  +H          + KP  +  LV       L +            
Sbjct: 215 SRSDHS-SNIKLR--IHSIQAELRRLLKSKPYENCLLV-------LLN------------ 252

Query: 171 NHGAFTVIMFYYLRPVWYSVYFSYVRPLFKWILRK---------TTRLCELQRICYGENH 221
                          V                            TTR  ++         
Sbjct: 253 ---------------VQN-----------AKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 222 GARRSLGVEYSLSHSRRYELQELIKFLNKMAV----ERKLHGNGLMMSV-----KGSVDT 272
                     +L+      L  L+K+L+           L  N   +S+     +  + T
Sbjct: 287 THISLDHHSMTLTPDEVKSL--LLKYLD-CRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 273 ILLVKKINPTVHVSFVKAISRCIEHIWGYRQLKQEITLLARTQYDA-----ENAEHEEKL 327
               K +N          I   +        L+       R  +D       +A     L
Sbjct: 344 WDNWKHVN---CDKLTTIIESSLN------VLEPAEY---RKMFDRLSVFPPSAHIPTIL 391

Query: 328 L-RLWQMLKPDVPLN--------SRVTKQWQTIGFQGDDPKTDFRGMGILGLDNL--LH- 375
           L  +W  +     +         S V KQ +           + +    + L+N   LH 
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK----VKLENEYALHR 447

Query: 376 -FASEYPTTAQHVLQHSLHP---QYGYAFAIVGINLTSLAYHLFQDDAAKTIVYNSCKSL 431
                Y           + P   QY Y+          + +HL   +  +          
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSH---------IGHHLKNIEHPE---------- 488

Query: 432 PSINVFHHFYCYLFYEFDRVWMESK 456
             + +F   +       D  ++E K
Sbjct: 489 -RMTLFRMVF------LDFRFLEQK 506

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	493
2lql_A	113	Coiled-coil-helix-coiled-coil-helix domain-contai	99.95
2lql_A	113	Coiled-coil-helix-coiled-coil-helix domain-contai	83.7

>2lql_A Coiled-coil-helix-coiled-coil-helix domain-contai protein 5; CHCH domain, mitochondrial import, MIA40-dependent disulfide system; NMR {Homo sapiens}

Probab=99.95  E-value=1.5e-29  Score=221.99  Aligned_cols=100  Identities=16%  Similarity=0.384  Sum_probs=74.8

Q ss_pred             hhHhhhchHhhhhchhhhhhhhcccC--cCCCcchhHHhCcchhhhHHH--HHHHHHhhcHHHHHHHHhhhccCCCCccc
Q psy16482         25 AALKAGAFHFGKTCELENNEFVLCRQ--ELNDPRKCITEGKAVTSCALS--FFRKVKESCFDEFQVYANCVDKSSTNFDL  100 (493)
Q Consensus        25 a~L~aaa~~~g~~C~~~n~~FmlCk~--e~~dP~~CL~eG~~Vt~Ca~~--~~~~i~~~C~~ef~~~~~Cld~~~~~~~~  100 (493)
                      +.|.||++++|++|..+|++||+|+.  |++||++||+||++||+||.+  +|++|+++|.+||++||+||++|++  ++
T Consensus         2 ~~l~aa~~~vak~C~~~~~~f~~C~~~~~~~dp~~Cl~eg~~vt~Ca~~~p~~~~I~~~C~~ef~~y~~CL~~n~~--~~   79 (113)
T 2lql_A            2 SHMQAALEVTARYCGRELEQYGQCVAAKPESWQRDCHYLKMSIAQCTSSHPIIRQIRQACAQPFEAFEECLRQNEA--AV   79 (113)
T ss_dssp             ------------CCHHHHHHHHHHHHHCTTHHHHTCSHHHHHHHHHHHTCCCCHHHHHHTHHHHHHHHHHHHHCTT--CT
T ss_pred             cHHHHHHHHHHHHccHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHhHHHHHHHHHHHHHccc--cH
Confidence            57899999999999999999999964  567899999999999999999  9999999999999999999999876  56


Q ss_pred             ccCchhhHHHHHHHHHhcCCCCCCCC
Q psy16482        101 TPCRNTQAVFDKCMNDKLGIDRPVYN  126 (493)
Q Consensus       101 ~~CRk~q~~~~~C~~~~l~~~r~~~g  126 (493)
                      ..||++|++|++|+.+++++++|..+
T Consensus        80 ~~Cr~~~~~f~~Cae~v~~~~~p~~~  105 (113)
T 2lql_A           80 GNCAEHMRRFLQCAEQVQPPRSPATV  105 (113)
T ss_dssp             TTCCSHHHHHHHHHTTC---------
T ss_pred             HHHHHHHHHHHHHHHHhccccCCCCc
Confidence            78999999999999999999998855

>2lql_A Coiled-coil-helix-coiled-coil-helix domain-contai protein 5; CHCH domain, mitochondrial import, MIA40-dependent disulfide system; NMR {Homo sapiens}

Probab=83.70  E-value=0.48  Score=41.15  Aligned_cols=44  Identities=16%  Similarity=0.371  Sum_probs=30.2

Q ss_pred             HHHHHHhhcHHHHHHHHhhhccCCCCcccccCchhhHHHHHHHHH
Q psy16482         72 FFRKVKESCFDEFQVYANCVDKSSTNFDLTPCRNTQAVFDKCMND  116 (493)
Q Consensus        72 ~~~~i~~~C~~ef~~~~~Cld~~~~~~~~~~CRk~q~~~~~C~~~  116 (493)
                      .+..|-++|.++|.+|..|...+..+ +-..|.+++.+..+|+.+
T Consensus         7 a~~~vak~C~~~~~~f~~C~~~~~~~-dp~~Cl~eg~~vt~Ca~~   50 (113)
T 2lql_A            7 ALEVTARYCGRELEQYGQCVAAKPES-WQRDCHYLKMSIAQCTSS   50 (113)
T ss_dssp             -------CCHHHHHHHHHHHHHCTTH-HHHTCSHHHHHHHHHHHT
T ss_pred             HHHHHHHHccHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHHhc
Confidence            34567788999999999998654322 466799999999999764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00