Psyllid ID: psy16503
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 244 | 2.2.26 [Sep-21-2011] | |||||||
| P36514 | 502 | UDP-glucuronosyltransfera | yes | N/A | 0.971 | 0.472 | 0.383 | 1e-47 | |
| Q9Y4X1 | 527 | UDP-glucuronosyltransfera | no | N/A | 0.893 | 0.413 | 0.406 | 3e-46 | |
| Q5RFJ3 | 527 | UDP-glucuronosyltransfera | no | N/A | 0.971 | 0.449 | 0.379 | 4e-46 | |
| Q6K1J1 | 530 | UDP-glucuronosyltransfera | no | N/A | 0.885 | 0.407 | 0.397 | 4e-46 | |
| Q6UWM9 | 527 | UDP-glucuronosyltransfera | no | N/A | 0.971 | 0.449 | 0.375 | 1e-45 | |
| P36512 | 531 | UDP-glucuronosyltransfera | no | N/A | 0.877 | 0.403 | 0.406 | 3e-45 | |
| Q8BWQ1 | 534 | UDP-glucuronosyltransfera | no | N/A | 0.975 | 0.445 | 0.373 | 5e-45 | |
| O97951 | 529 | UDP-glucuronosyltransfera | N/A | N/A | 0.922 | 0.425 | 0.381 | 7e-45 | |
| O77649 | 530 | UDP-glucuronosyltransfera | N/A | N/A | 0.922 | 0.424 | 0.390 | 9e-45 | |
| Q9GLD9 | 529 | UDP-glucuronosyltransfera | no | N/A | 0.922 | 0.425 | 0.385 | 1e-44 |
| >sp|P36514|UD2C1_RABIT UDP-glucuronosyltransferase 2C1 (Fragment) OS=Oryctolagus cuniculus GN=UGT2C1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 148/240 (61%), Gaps = 3/240 (1%)
Query: 5 DIKKFLDESVN-GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S N GV+ F++GS+IQ + ++ A QIPQ+V+W++ G+ +
Sbjct: 264 ELEEFVQSSGNDGVVVFTLGSMIQ--NLTEERSNLIASALAQIPQKVLWRYTGKKPATLG 321
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP + FI+HGG G EA+Y GVP++GIP+FGDQ NI V+
Sbjct: 322 PNTRLFEWIPQNDLLGHPKTRAFITHGGTNGLYEAIYHGVPMVGIPLFGDQPDNIARVKA 381
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V + +T ++L AL+ V+ NPSYK+ A K++R+ D+P+ PLD A++WIE V+
Sbjct: 382 KGAAVDVDLRIMTTSSLLKALKDVINNPSYKENAMKLSRIHHDQPLKPLDRAVFWIEFVM 441
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKR 243
RH G HLR A+ +L W+QY LDV++ L+ +A +++ + + + T + +KR
Sbjct: 442 RHKGARHLRVAAHDLTWFQYYSLDVVVFLLTCVATIIFLAKKCCLFFYRRFCKTGNKRKR 501
|
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Oryctolagus cuniculus (taxid: 9986) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 7 |
| >sp|Q9Y4X1|UD2A1_HUMAN UDP-glucuronosyltransferase 2A1 OS=Homo sapiens GN=UGT2A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 142/229 (62%), Gaps = 11/229 (4%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S NGV+ FS+GS++ K+ +K A QIPQ+V+W+++G+ +
Sbjct: 289 EMEEFIQSSGKNGVVVFSLGSMV--KNLTEEKANLIASALAQIPQKVLWRYKGKKPATLG 346
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
+ L W PQ D+L HP K FI+HGG G EA+Y GVP++G+PMF DQ NI ++
Sbjct: 347 NNTQLFDWIPQNDLLGHPKTKAFITHGGTNGIYEAIYHGVPMVGVPMFADQPDNIAHMKA 406
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V + + +T +L ALRTV+ PSYK+ A +++R+ D+P+ PLD A++WIE V+
Sbjct: 407 KGAAVEVNLNTMTSVDLLSALRTVINEPSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVM 466
Query: 184 RHGGGAHLRPASLELYWWQYILLDVI--------IALILLIAAMVWSIQ 224
RH G HLR A+ +L W+QY LDVI A+ L+I ++S Q
Sbjct: 467 RHKGAKHLRVAAHDLTWFQYHSLDVIGFLLVCVTTAIFLVIQCCLFSCQ 515
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Active on odorants and seems to be involved in olfaction; it could help clear lipophilic odorant molecules from the sensory epithelium. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q5RFJ3|UD2A3_PONAB UDP-glucuronosyltransferase 2A3 OS=Pongo abelii GN=UGT2A3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 143/240 (59%), Gaps = 3/240 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
+++ F+ S +G++ FS+GS+ Q + +K A QIPQ+V+W+++G+ S
Sbjct: 289 EMENFVQSSGEDGIVVFSLGSLFQNVT--EEKANIIASALAQIPQKVLWRYKGKKPSTLG 346
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP K FI+HGG G EA+Y GVP++G+P+FGDQ NI ++
Sbjct: 347 TNTRLYDWIPQNDLLGHPKTKAFITHGGMNGIYEAIYHGVPMVGVPIFGDQLDNIAHMKA 406
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V + + +T E +L ALRTV N SYK+ A +++R+ D+P+ PLD A++WIE V+
Sbjct: 407 KGAAVEINFKTMTSEDLLRALRTVTTNSSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVM 466
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKR 243
RH G HLR A+ L W+Q+ +DVI L+ +A ++ ++ + T +KR
Sbjct: 467 RHKGAKHLRSAAHNLTWFQHYSIDVIGFLLACVATAIFLFTKCCLFSCQKFNKTRKIEKR 526
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q6K1J1|UDB31_CANFA UDP-glucuronosyltransferase 2B31 OS=Canis familiaris GN=UGT2B31 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 138/219 (63%), Gaps = 3/219 (1%)
Query: 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK 62
T++++F+ S NG++ FS+GS++ + ++ A QIPQ+V+W+++G+
Sbjct: 291 TEMEEFVQSSGENGIVVFSLGSMVNNMT--EERANVIASALAQIPQKVLWRFDGKKPDTL 348
Query: 63 IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 122
L W PQ D+L HP K FI+HGG G EA+Y G+P++GIP+F DQ NI ++
Sbjct: 349 GPNTRLYKWLPQNDLLGHPKTKAFITHGGTNGIYEAIYHGIPMVGIPLFADQADNIVHMK 408
Query: 123 KAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHV 182
G + L + ++ +L ALR V+ +PSYK+ A K++ + D+P+ PLD A++WIE+V
Sbjct: 409 AKGAAIRLDFSTMSSADLLNALRMVINDPSYKENAMKLSGIHHDQPIKPLDRAVFWIEYV 468
Query: 183 IRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVW 221
+RH G HLRPAS +L W+QY LDVI L+ +A ++
Sbjct: 469 MRHQGAKHLRPASHDLTWFQYHSLDVIGFLLACVATAIF 507
|
UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme has glucuronidating capacity on phenols, opioids, and carboxylic acid-containing drugs. Canis familiaris (taxid: 9615) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q6UWM9|UD2A3_HUMAN UDP-glucuronosyltransferase 2A3 OS=Homo sapiens GN=UGT2A3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 145/240 (60%), Gaps = 3/240 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
+++ F+ S +G++ FS+GS+ Q + +K A QIPQ+V+W+++G+ S
Sbjct: 289 EMENFVQSSGEDGIVVFSLGSLFQNVT--EEKANIIASALAQIPQKVLWRYKGKKPSTLG 346
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP K FI+HGG G EA+Y GVP++G+P+FGDQ NI ++
Sbjct: 347 ANTRLYDWIPQNDLLGHPKTKAFITHGGMNGIYEAIYHGVPMVGVPIFGDQLDNIAHMKA 406
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V + + +T E +L ALRTV+ + SYK+ A +++R+ D+P+ PLD A++WIE V+
Sbjct: 407 KGAAVEINFKTMTSEDLLRALRTVITDSSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVM 466
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKR 243
RH G HLR A+ +L W+Q+ +DVI L+ +A ++ ++ + T +KR
Sbjct: 467 RHKGAKHLRSAAHDLTWFQHYSIDVIGFLLACVATAIFLFTKCFLFSCQKFNKTRKIEKR 526
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|P36512|UDB13_RABIT UDP-glucuronosyltransferase 2B13 OS=Oryctolagus cuniculus GN=UGT2B13 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 134/219 (61%), Gaps = 5/219 (2%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQR 75
GV+ FS+GS+I + ++ A Q+PQ+V+W++EG+ L W PQ
Sbjct: 305 GVVVFSLGSMIS--NLTEERANVIASALAQLPQKVLWRFEGKKPDMLGSNTRLYKWIPQN 362
Query: 76 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135
D+L HP K FI+HGG G EA+Y G+P++G+P+FGDQ NI ++ G V L +
Sbjct: 363 DLLGHPKTKAFITHGGANGVFEAIYHGIPMVGLPLFGDQLDNIVYMKAKGAAVKLNLKTM 422
Query: 136 TEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPAS 195
+ +L AL+TV+ +PSYK+ A ++R+ D+PM PLD A++WIE+V+RH G HLR A+
Sbjct: 423 SSADLLNALKTVINDPSYKENAMTLSRIHHDQPMKPLDRAVFWIEYVMRHKGAKHLRVAA 482
Query: 196 LELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITY 234
+L W+QY LDVI L+ +A + I V+ L+ Y
Sbjct: 483 HDLTWYQYHSLDVIGFLLACVAITTYLI---VKCCLLVY 518
|
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Acts on small phenolic agents such as 2-beta-naphthol and 4-methylumbelliferone as well as bulky phenolic compounds like 2-hydroxy- and 4-hydroxybiphenyl. In contrast to 2B16 it is active toward octylgallate. Oryctolagus cuniculus (taxid: 9986) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q8BWQ1|UD2A3_MOUSE UDP-glucuronosyltransferase 2A3 OS=Mus musculus GN=Ugt2a3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (458), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S +GV+ FS+GS++ K+ +K QIPQ+V+W++ G+ +
Sbjct: 291 EMEEFVQSSGEHGVVVFSLGSMV--KNLTEEKANLIASVLAQIPQKVLWRYSGKKPATLG 348
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L +W PQ D+L HP K FI+HGG G EA+Y GVP++G+PM GDQ NI +E
Sbjct: 349 SNTRLFNWIPQNDLLGHPKTKAFITHGGTNGIYEAIYHGVPMVGVPMLGDQPHNIAHMEA 408
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G + + +T +L A+R V+ PSYK+ A +++R+ D+P+ PLD A++WIE V+
Sbjct: 409 KGAALKVSISTMTSTDLLSAVRAVINEPSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVM 468
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKR 243
RH G HLR A+ +L W+QY LDVI L+L + + + I + Y K
Sbjct: 469 RHKGAKHLRVAAHDLSWFQYHSLDVIGFLLLCVVTLTFIITKFCLFVCQKLYMKESKKMG 528
Query: 244 N 244
N
Sbjct: 529 N 529
|
UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|O97951|UDB18_MACFA UDP-glucuronosyltransferase 2B18 OS=Macaca fascicularis GN=UGT2B18 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (457), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 140/228 (61%), Gaps = 3/228 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S NGV+ FS+GS++ + ++ A QIPQ+V+W+++G+
Sbjct: 291 EMEEFVQSSGENGVVVFSLGSMVT--NMKEERANVIASALAQIPQKVLWRFDGKKPDTLG 348
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP + FI+HGG G EA+Y GVP++GIP+F DQ NI ++
Sbjct: 349 LNTRLYKWIPQNDLLGHPKTRAFITHGGSNGIYEAIYHGVPMVGIPLFADQPDNIAHMKA 408
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V L +D ++ ++ AL+TV+ +P YK+ K++R+ D+P+ PLD A++WIE V+
Sbjct: 409 KGAAVRLDFDTMSSTDLVNALKTVINDPLYKENVMKLSRIQHDQPVKPLDRAVFWIEFVM 468
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYAL 231
RH G HLRPA+ +L W+QY LDVI L+ +A +++ I +
Sbjct: 469 RHKGAKHLRPAAHDLTWFQYHSLDVIGFLLACVATVIFIIMKCCLFCF 516
|
UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme displays activity toward 3-hydroxyandrogens. It is principally active on C19 steroids having an hydroxyl group at position 3-alpha of the steroid molecule and also active on planar phenols and bile acids. Macaca fascicularis (taxid: 9541) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|O77649|UDB20_MACFA UDP-glucuronosyltransferase 2B20 OS=Macaca fascicularis GN=UGT2B20 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (456), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 138/228 (60%), Gaps = 3/228 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S NGV+ FS+GS+I S ++ A QIPQ+V+WK++G+ +
Sbjct: 292 EMEEFVQSSGENGVVVFSLGSMISNMS--EERANMIASALAQIPQKVLWKFDGKKPNTLG 349
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP K FI+HGG G EA+Y G+P++GIP+F DQ NI ++
Sbjct: 350 SNTRLYKWLPQNDLLGHPKTKAFITHGGTNGIYEAIYHGIPMVGIPLFADQHDNIVHMKV 409
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G +++ ++ +L AL++V+ P YK+ A K++R+ D+PM PLD A++WIE V+
Sbjct: 410 KGAALSVDIRTMSSRDLLNALKSVINEPIYKENAMKLSRIHHDQPMKPLDRAVFWIEFVM 469
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYAL 231
RH G HLR A+ L W QY LDVI L+ +AA+++ I +
Sbjct: 470 RHKGAKHLRVAAHNLTWIQYHSLDVIAFLLACVAAVIFIITKCCLFCF 517
|
UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme has glucuronidating capacity with androgens, such as testosterone, dihydrotestosterone (DHT) and 3-alpha-diol. It is also active on catecholoestrogens including 1,3,5,10-oestratriene-3,4-diol-17-one. Macaca fascicularis (taxid: 9541) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q9GLD9|UDB33_MACMU UDP-glucuronosyltransferase 2B33 OS=Macaca mulatta GN=UGT2B33 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 139/228 (60%), Gaps = 3/228 (1%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F+ S NGV+ F++GS+I + ++ A QIPQ+V+W+++G
Sbjct: 291 EMEEFVQSSGENGVVVFTLGSMIT--NMKEERANVIASALAQIPQKVLWRFDGNKPDTLG 348
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP K FI+HGG G EA+Y GVP++GIP+F DQ NI ++
Sbjct: 349 VNTRLYKWIPQNDLLGHPKTKAFITHGGANGIYEAIYHGVPMVGIPLFADQPDNIAHMKT 408
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G V L +D ++ + AL+TV+ +P YK+ K++R+ +D+P+ PLD A++WIE V+
Sbjct: 409 RGAAVQLDFDTMSSTDLANALKTVINDPLYKENVMKLSRIQRDQPVKPLDRAVFWIEFVM 468
Query: 184 RHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYAL 231
RH G HLRPA+ +L W+QY LDVI L+ +A +++ I +
Sbjct: 469 RHKGAKHLRPAAHDLTWFQYHSLDVIGFLLACVATVIFIIMKCCLFCF 516
|
UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme has glucuronidating capacity on estriol and does not catalyze the glucuronidation of beta-estradiol. Capable of conjugating 4-hydroxyestrone, androsterone, diclofenac, and hyodeoxycholic acid. Macaca mulatta (taxid: 9544) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 244 | ||||||
| 328714170 | 519 | PREDICTED: UDP-glucuronosyltransferase 2 | 0.918 | 0.431 | 0.488 | 6e-67 | |
| 193678784 | 516 | PREDICTED: UDP-glucuronosyltransferase 2 | 0.979 | 0.463 | 0.462 | 6e-66 | |
| 189236219 | 515 | PREDICTED: similar to glucosyl/glucurono | 0.971 | 0.460 | 0.481 | 6e-66 | |
| 193713623 | 514 | PREDICTED: UDP-glucuronosyltransferase 2 | 0.979 | 0.464 | 0.462 | 4e-65 | |
| 157134141 | 521 | glucosyl/glucuronosyl transferases [Aede | 0.885 | 0.414 | 0.518 | 8e-65 | |
| 270006529 | 504 | hypothetical protein TcasGA2_TC030780 [T | 0.856 | 0.414 | 0.523 | 7e-64 | |
| 157134143 | 526 | glucosyl/glucuronosyl transferases [Aede | 0.979 | 0.454 | 0.471 | 2e-62 | |
| 91090214 | 519 | PREDICTED: similar to glucosyl/glucurono | 0.840 | 0.394 | 0.512 | 9e-62 | |
| 189240914 | 524 | PREDICTED: similar to glucosyl/glucurono | 0.840 | 0.391 | 0.536 | 1e-61 | |
| 270013462 | 983 | hypothetical protein TcasGA2_TC012061 [T | 0.840 | 0.208 | 0.536 | 1e-61 |
| >gi|328714170|ref|XP_001946621.2| PREDICTED: UDP-glucuronosyltransferase 2B15-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
Query: 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK 62
E DI+K++DE+ NGVIYF MGS+++G++F +KR+ FL F++IPQR++WKWEGE + GK
Sbjct: 279 EEDIQKYIDEAENGVIYFCMGSLLRGETFSPEKRQMFLNVFKKIPQRILWKWEGE-LPGK 337
Query: 63 IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 122
++++ W PQRDIL HPNVK+FISHGG LGTTEA+Y GVPI+ +P+FGDQ NI+ V
Sbjct: 338 PSNVMIRKWMPQRDILAHPNVKLFISHGGLLGTTEAVYEGVPILSMPIFGDQMTNIKAVV 397
Query: 123 KAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHV 182
G + Y + E+ + + + ++L NP Y+++A++++ F+DRPM PL+TA+YW E+V
Sbjct: 398 SKGAAEMINYGDLNEDDIFIKITSMLTNPKYRQKAKELSEAFRDRPMSPLETAVYWTEYV 457
Query: 183 IRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLV 227
IRH G HLR A++ + W+QY L+DV++ + L I M +L+
Sbjct: 458 IRHKGAPHLRSAAVGMPWYQYCLIDVLVVIFLSITTMFVLFYYLI 502
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193678784|ref|XP_001951823.1| PREDICTED: UDP-glucuronosyltransferase 2B14-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
DI+K++DE+ NGVIYF MGS+++G++F +KR+ FL F++IPQR++WKWEGE + GK
Sbjct: 278 DIQKYIDEAENGVIYFCMGSLLRGETFSPEKRQMFLNVFKKIPQRILWKWEGE-LPGKPS 336
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
++++ W PQRDIL HPNVK+FISHGG LGTTEA+Y GVPI+ +P+FGDQ NI+ V
Sbjct: 337 NVMIRKWMPQRDILAHPNVKLFISHGGLLGTTEAVYEGVPILSMPIFGDQMTNIKAVVNK 396
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G + Y + E+ + + + ++L NP Y+++A++++ F+DRPM PL+TA+YW E+VIR
Sbjct: 397 GAAEMMNYGDLNEDDIFIKITSMLTNPKYRQKAKELSEAFRDRPMSPLETAVYWTEYVIR 456
Query: 185 HGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKRN 244
H G HLR A++ + W+QY L+DV++ + L I + + +L+ + N KK++
Sbjct: 457 HKGAPHLRSAAVGMPWYQYYLIDVLVVISLSITTIFVLVYYLIFKVISRLLNRKSKKKQS 516
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|189236219|ref|XP_971626.2| PREDICTED: similar to glucosyl/glucuronosyl transferases [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 180/239 (75%), Gaps = 2/239 (0%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
+++K+++ES +GVIYFS+GS+I+G +FP +KR FL+AF ++PQRV+WKWE E MSGK D
Sbjct: 277 NLEKWINESAHGVIYFSLGSMIKGHTFPDEKRSEFLKAFGRLPQRVLWKWENETMSGKPD 336
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
++++ W PQ DIL HPNVK FISHGG LGTTEA++ GVP++ +P +GDQ N R +E
Sbjct: 337 NVMIQKWMPQLDILCHPNVKAFISHGGLLGTTEAVHCGVPVVVMPQYGDQFTNARALEAN 396
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G GV L + TEE + AL+T+L +P ++K+A++++ F+DRP+PPL+TAIYW+E+V R
Sbjct: 397 GGGVILHLSEATEERIYDALKTIL-DPRFQKQAKELSARFRDRPLPPLETAIYWVEYVAR 455
Query: 185 HGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKR 243
H G H+R A++++ ++Y+LLDV IA ++L+A +++++ + A++ T DK++
Sbjct: 456 HRGAHHMRTAAVDMPLYKYLLLDV-IAFLVLVAGLLFALFFYATRAILRKLFTKRDKQK 513
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193713623|ref|XP_001945411.1| PREDICTED: UDP-glucuronosyltransferase 2A1-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 171/240 (71%), Gaps = 1/240 (0%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
DI+K++DE+ NGVIYF MGS+++G+SF ++KR+ FL F++IPQR++WKWEGE + GK
Sbjct: 276 DIQKYIDEAENGVIYFCMGSLLRGESFAAEKRQMFLNVFDKIPQRILWKWEGE-LPGKPS 334
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
++++ W PQRDIL HPNVK+FISHGG LGTTEA++ GVPI+ +P+ DQ NI+ V
Sbjct: 335 NVMIRKWMPQRDILAHPNVKLFISHGGLLGTTEAVHEGVPILSMPLSADQITNIKSVVSK 394
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G + Y + E+ +L+ + ++L NP YK++A++++ F+DRPM PL+TA+YW E+VIR
Sbjct: 395 GAAEMMNYGDLNEKEILIKITSMLTNPIYKQKAKELSEAFRDRPMSPLETAVYWTEYVIR 454
Query: 185 HGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYNTVDDKKRN 244
H G HLR A++ + W+QY L+DV++ + L I + + LV ++ N +K++
Sbjct: 455 HKGAPHLRSAAVGMPWYQYYLIDVLVVVFLCITTIFVLLYCLVFKVILRLLNRRSKEKQS 514
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157134141|ref|XP_001663166.1| glucosyl/glucuronosyl transferases [Aedes aegypti] gi|108881418|gb|EAT45643.1| AAEL003102-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 156/216 (72%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D++K+LDE+ +GVIYF MGS I+ FP +KR AFL+ F ++ QRV+WK+E ENM +
Sbjct: 279 DLQKYLDEAKDGVIYFCMGSTIKSTHFPEEKRNAFLKTFSKLKQRVLWKFEDENMPNQPS 338
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+++K+W PQ DIL HPNVK+FI+HGG LG TEALY G P++GIP+FGDQ NI ++
Sbjct: 339 NLMIKAWMPQNDILAHPNVKLFITHGGLLGMTEALYHGKPMVGIPIFGDQPMNIEKAVRS 398
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
GF V L YD I E+TV A+ VL NPSY K ++V+ F+D+PM P +TA++W E+VIR
Sbjct: 399 GFAVFLDYDDINEDTVDKAINEVLNNPSYAKNVKQVSDRFRDKPMTPKETAVFWTEYVIR 458
Query: 185 HGGGAHLRPASLELYWWQYILLDVIIALILLIAAMV 220
H G HLR +L+L +QY LLDV +++++ A+V
Sbjct: 459 HRGAPHLRSTALDLSLFQYQLLDVYAVMLVMLVAIV 494
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270006529|gb|EFA02977.1| hypothetical protein TcasGA2_TC030780 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 163/210 (77%), Gaps = 1/210 (0%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
+++K+++ES +GVIYFS+GS+I+G +FP +KR FL+AF ++PQRV+WKWE E MSGK D
Sbjct: 274 NLEKWINESAHGVIYFSLGSMIKGHTFPDEKRSEFLKAFGRLPQRVLWKWENETMSGKPD 333
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
++++ W PQ DIL HPNVK FISHGG LGTTEA++ GVP++ +P +GDQ N R +E
Sbjct: 334 NVMIQKWMPQLDILCHPNVKAFISHGGLLGTTEAVHCGVPVVVMPQYGDQFTNARALEAN 393
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G GV L + TEE + AL+T+L +P ++K+A++++ F+DRP+PPL+TAIYW+E+V R
Sbjct: 394 GGGVILHLSEATEERIYDALKTIL-DPRFQKQAKELSARFRDRPLPPLETAIYWVEYVAR 452
Query: 185 HGGGAHLRPASLELYWWQYILLDVIIALIL 214
H G H+R A++++ ++Y+LLDVI L+L
Sbjct: 453 HRGAHHMRTAAVDMPLYKYLLLDVIAFLVL 482
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157134143|ref|XP_001663167.1| glucosyl/glucuronosyl transferases [Aedes aegypti] gi|108881419|gb|EAT45644.1| AAEL003099-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 165/242 (68%), Gaps = 3/242 (1%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D++K+LDE+ GV+YF MGS I+ FP +KR AFL+ F ++ QRV+WK+E ENM+ +
Sbjct: 283 DLQKYLDEAKEGVVYFCMGSNIKSIHFPEEKRNAFLKVFSKLKQRVLWKFEDENMANQPS 342
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+++K+W PQ DIL HPNVK+FI+HGG LGTTEAL+ G P+IGIP+FGDQ N++ ++
Sbjct: 343 NLMIKAWMPQNDILAHPNVKLFITHGGLLGTTEALFHGKPMIGIPIFGDQPMNVQKAVRS 402
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+ V L YD I EE V AL VL +PSY + A+ V+ F+D+PM P +TA++W E+VIR
Sbjct: 403 GYAVLLDYDDINEENVDKALSAVLNDPSYARNAKLVSERFRDKPMTPKETAVFWTEYVIR 462
Query: 185 HGGGAHLRPASLELYWWQYILLD---VIIALILLIAAMVWSIQWLVRYALITYYNTVDDK 241
H G HLR ++++L QY LLD V++ + L + A+ I + + +VD K
Sbjct: 463 HRGAPHLRSSAMDLSLIQYHLLDVYAVMLVMALAVVALNICIAMKILRKVFGRKPSVDKK 522
Query: 242 KR 243
K+
Sbjct: 523 KK 524
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91090214|ref|XP_967924.1| PREDICTED: similar to glucosyl/glucuronosyl transferases [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 149/205 (72%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D+++FLD + +GVIYFSMGS ++ P+DKR A L+ F ++ Q+++WKWE EN+ GK
Sbjct: 279 DLQEFLDGAKDGVIYFSMGSNLKSADLPNDKRDAILKTFAKLKQKILWKWEDENLPGKPP 338
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+ W PQ+DIL HPNVK+FI+HGG L TTE +Y GVPI+ +P+FGDQK N R K
Sbjct: 339 NVKTAKWLPQQDILAHPNVKLFITHGGLLSTTETIYHGVPILAVPIFGDQKLNARSAVKG 398
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+GV LPY+++ EET+ ++ VL N YK+ +K ++LF DR + P+DT YW+E+V+R
Sbjct: 399 GYGVHLPYEELNEETLTNSINEVLSNKKYKENVQKRSKLFHDRLVSPIDTLTYWVEYVVR 458
Query: 185 HGGGAHLRPASLELYWWQYILLDVI 209
H G HLR A+L+L W++Y+LLDVI
Sbjct: 459 HRGAPHLRVAALDLPWYKYLLLDVI 483
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|189240914|ref|XP_967845.2| PREDICTED: similar to glucosyl/glucuronosyl transferases [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 148/205 (72%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D+++FLD + +GVIYFSMGS ++ P+DKR A L+ F ++ Q+V+WKWE E++ GK
Sbjct: 281 DLQEFLDGAKDGVIYFSMGSNLKSAELPNDKRDAILKTFAKLKQKVLWKWEEEDLPGKSP 340
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+ W PQ+DIL HPNVK+FI+HGG L T E +Y GVPI+ IP+FGDQK N R K+
Sbjct: 341 NVKTAKWLPQQDILAHPNVKLFITHGGLLSTIETIYHGVPILAIPIFGDQKMNARSAVKS 400
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+GV L Y +I EET+ ++ VL N YK +K ++LF DR + PLDTAIYWIE+VIR
Sbjct: 401 GYGVYLAYSEIKEETLTNSINEVLNNQKYKDNVQKRSKLFHDRIVSPLDTAIYWIEYVIR 460
Query: 185 HGGGAHLRPASLELYWWQYILLDVI 209
H G HLR A+L+L W++Y+LLDVI
Sbjct: 461 HKGAPHLRVAALDLPWYKYLLLDVI 485
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270013462|gb|EFA09910.1| hypothetical protein TcasGA2_TC012061 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 148/205 (72%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D+++FLD + +GVIYFSMGS ++ P+DKR A L+ F ++ Q+V+WKWE E++ GK
Sbjct: 740 DLQEFLDGAKDGVIYFSMGSNLKSAELPNDKRDAILKTFAKLKQKVLWKWEEEDLPGKSP 799
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+ W PQ+DIL HPNVK+FI+HGG L T E +Y GVPI+ IP+FGDQK N R K+
Sbjct: 800 NVKTAKWLPQQDILAHPNVKLFITHGGLLSTIETIYHGVPILAIPIFGDQKMNARSAVKS 859
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+GV L Y +I EET+ ++ VL N YK +K ++LF DR + PLDTAIYWIE+VIR
Sbjct: 860 GYGVYLAYSEIKEETLTNSINEVLNNQKYKDNVQKRSKLFHDRIVSPLDTAIYWIEYVIR 919
Query: 185 HGGGAHLRPASLELYWWQYILLDVI 209
H G HLR A+L+L W++Y+LLDVI
Sbjct: 920 HKGAPHLRVAALDLPWYKYLLLDVI 944
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 244 | ||||||
| FB|FBgn0040256 | 517 | Ugt86Dd "Ugt86Dd" [Drosophila | 0.811 | 0.382 | 0.449 | 1.2e-47 | |
| FB|FBgn0027073 | 532 | CG4302 [Drosophila melanogaste | 0.811 | 0.372 | 0.449 | 2.6e-47 | |
| FB|FBgn0040259 | 528 | Ugt86Da "Ugt86Da" [Drosophila | 0.815 | 0.376 | 0.427 | 1e-45 | |
| FB|FBgn0034605 | 530 | CG15661 [Drosophila melanogast | 0.815 | 0.375 | 0.417 | 1.3e-45 | |
| FB|FBgn0038886 | 537 | CG6475 [Drosophila melanogaste | 0.811 | 0.368 | 0.419 | 1.3e-45 | |
| FB|FBgn0040257 | 521 | Ugt86Dc "Ugt86Dc" [Drosophila | 0.946 | 0.443 | 0.392 | 1.3e-45 | |
| FB|FBgn0032684 | 530 | CG10178 [Drosophila melanogast | 0.918 | 0.422 | 0.376 | 9.1e-45 | |
| ZFIN|ZDB-GENE-080227-13 | 535 | ugt1b4 "UDP glucuronosyltransf | 0.807 | 0.368 | 0.43 | 1.9e-44 | |
| ZFIN|ZDB-GENE-080227-11 | 531 | ugt1b2 "UDP glucuronosyltransf | 0.807 | 0.370 | 0.43 | 1.9e-44 | |
| ZFIN|ZDB-GENE-080227-14 | 528 | ugt1b5 "UDP glucuronosyltransf | 0.807 | 0.373 | 0.43 | 1.9e-44 |
| FB|FBgn0040256 Ugt86Dd "Ugt86Dd" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 89/198 (44%), Positives = 136/198 (68%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
DIK+F++ S +GVIYFSMGS ++ K P + R L+ F ++ QRV+WK+E ++M GK
Sbjct: 275 DIKQFIEGSPHGVIYFSMGSNVKSKDLPQETRDTLLKTFAKLKQRVLWKFEDDDMPGKPA 334
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+L+K W PQ DIL HPNVK+FISHGG L +TE++Y G PI+G+P F DQ N++ ++
Sbjct: 335 NVLIKKWYPQPDILAHPNVKLFISHGGLLSSTESVYFGKPILGLPCFYDQHMNVQRAQRV 394
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
GFG+ L + + +E + A++T+L +PSY K + ++ ++D+P +D A++W E+VIR
Sbjct: 395 GFGLGLDLNNLKQEDLEKAIQTLLTDPSYAKASLAISERYRDQPQSAVDRAVWWTEYVIR 454
Query: 185 HGGGAHLRPASLELYWWQ 202
H G HLR S +L + Q
Sbjct: 455 HNGAPHLRATSRDLNFIQ 472
|
|
| FB|FBgn0027073 CG4302 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 89/198 (44%), Positives = 131/198 (66%)
Query: 6 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDK 65
++KFLD + +G IYFS+GS ++ P +K K FL F + QRV+WK+E E++
Sbjct: 293 LQKFLDGATHGAIYFSLGSQVRSADLPPEKLKVFLEVFGSLKQRVLWKFEDESLPNLPAN 352
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG 125
+ ++SW PQ DIL HPNVKVFI+HGG GT EA+Y+GVPI+G+P++ DQ NI + A
Sbjct: 353 VKVQSWLPQGDILAHPNVKVFIAHGGLFGTQEAVYNGVPILGMPVYCDQHQNINQGKSAE 412
Query: 126 FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 185
+ + L Y ++T E + L ++ NP Y+ +K +R+F+DRP+ +DTAIYWI +VI H
Sbjct: 413 YALGLDYRKVTVEELRGLLMELIENPKYRNNIKKASRIFRDRPLGAMDTAIYWINYVIEH 472
Query: 186 GGGAHLRPASLELYWWQY 203
G HL A + L W+Q+
Sbjct: 473 RGAPHLVAAGVHLPWYQF 490
|
|
| FB|FBgn0040259 Ugt86Da "Ugt86Da" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 85/199 (42%), Positives = 133/199 (66%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
DI +F++ + +GVIYFSMGS ++ K+ P +KR+A + F Q+ QRV+WK+E ++ GK
Sbjct: 280 DILEFIEGAEHGVIYFSMGSNLKSKTLPLEKRQALIDTFAQLKQRVLWKFEDTDLPGKPA 339
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+ + W PQ DIL H NV FI+HGG L TTE++Y P +GIP+FGDQ N+ E+
Sbjct: 340 NVFISDWFPQDDILAHDNVLAFITHGGLLSTTESIYHRKPFVGIPIFGDQFLNMARAEQN 399
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+GVT+ Y++++ +L A++ ++ NP +R ++ ++D+ PL+ A+YW+EHV R
Sbjct: 400 GYGVTVHYEELSSAKLLAAIQKIINNPEATQRVRDMSDRYRDQQQTPLERAVYWVEHVSR 459
Query: 185 HGGGAHLRPASLELYWWQY 203
H G +LR AS +L + QY
Sbjct: 460 HKGAKYLRSASQDLNFIQY 478
|
|
| FB|FBgn0034605 CG15661 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 83/199 (41%), Positives = 133/199 (66%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
D++ LD + G I+FS+GS +Q K P + + FL+ F + QRV+WK+E E++S D
Sbjct: 292 DMQALLDGATEGAIFFSLGSNVQSKDMPVEMLRLFLQVFGSLKQRVLWKFEDESISQLPD 351
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
++++ W PQ DIL H +VKVFI+HGG GT E ++ VP++GIP + DQ N+
Sbjct: 352 NVMVRKWLPQADILAHRHVKVFITHGGLFGTQEGVHYAVPMLGIPFYCDQHLNMNKAVLG 411
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+ ++L + ITEE + +L ++ N +YK+ ++V+ +F+DRP+ P +A+YWIE+VIR
Sbjct: 412 GYAISLHFQSITEEILRHSLDQLIHNVTYKENVQRVSDIFRDRPLEPRKSAVYWIEYVIR 471
Query: 185 HGGGAHLRPASLELYWWQY 203
H G +H+R A L+L W+Q+
Sbjct: 472 HRGASHMRSAGLDLNWFQF 490
|
|
| FB|FBgn0038886 CG6475 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 83/198 (41%), Positives = 128/198 (64%)
Query: 6 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDK 65
IK +LD + +G IYFS+GS ++ P++K + FL F + QRV+WK+E + + D
Sbjct: 297 IKNYLDNAEHGAIYFSLGSQVRSADMPAEKLQIFLDVFASLKQRVLWKFEDDQLPNLPDN 356
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG 125
+ ++ W PQ DIL HPNVKVFI+HGG G EA+Y VP++G+P + DQ NI+ + AG
Sbjct: 357 VKVEKWLPQADILAHPNVKVFIAHGGLFGMQEAVYHAVPVLGMPFYFDQDINIKAGQAAG 416
Query: 126 FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 185
+ + L Y I+++ + AL +L +P Y+ K +R+F+DRP+ +DTA+YWI +V+ H
Sbjct: 417 YAIGLDYRTISKDQLKSALHALLKDPKYQANMMKASRIFRDRPLGAMDTAMYWINYVVEH 476
Query: 186 GGGAHLRPASLELYWWQY 203
G HL A + L W+Q+
Sbjct: 477 RGAPHLVAAGVHLPWYQF 494
|
|
| FB|FBgn0040257 Ugt86Dc "Ugt86Dc" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 91/232 (39%), Positives = 137/232 (59%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID 64
+I+KF++E+ +GVIYFS+GS + K P +KRKA + + RVIWK+E E K D
Sbjct: 278 NIRKFIEEAEHGVIYFSLGSNLNSKDLPENKRKAIVETLRGLKYRVIWKYEEETFVDKPD 337
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+L+ +W PQ DIL H V FI+HGG L T E++Y G P++GIP FGDQ N+ E+
Sbjct: 338 NVLISNWLPQDDILAHEKVIAFITHGGLLSTMESIYHGKPVVGIPFFGDQFMNMARAEQM 397
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G+G+T+ Y Q+T A+ + +PS+ +R + ++ ++D+ PL+ A+YW+EHV R
Sbjct: 398 GYGITVKYAQLTASLFRSAIERITSDPSFTERVKVISSQYRDQKETPLERAVYWVEHVTR 457
Query: 185 HGGGAHLRPASLELYWWQYXXXXXXXXXXXXXXXMVWSIQWLVRYALITYYN 236
H G +LR A +L + QY V + LVR+ L+T N
Sbjct: 458 HKGAKYLRSACQDLNFIQYHNLDVLATFFSVIGLTVIFVFLLVRF-LVTIVN 508
|
|
| FB|FBgn0032684 CG10178 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 85/226 (37%), Positives = 137/226 (60%)
Query: 4 TDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
TD++ FLD + GVIYFSMGS ++ P +K L+AF Q+ Q+VIWK+E +++
Sbjct: 284 TDLQNFLDNATYGVIYFSMGSYVKSTDLPQEKTALILKAFGQLKQQVIWKFENDSIGDLP 343
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
+++K W PQ DIL HPNVK+FI+HGG GT E +Y GVP++ +P++GDQ N +
Sbjct: 344 SNVMIKKWMPQNDILAHPNVKLFITHGGIFGTQEGIYWGVPMLCVPLYGDQHRNTIKSVR 403
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G+ +L + ++T + ++ + T++ +P YK+ A +V++ F+D P+ PLD A +WIE++I
Sbjct: 404 EGYARSLVFSKLTTDDLVRNIETLINDPQYKRSALEVSQRFRDNPIHPLDEATFWIEYII 463
Query: 184 RHGGGAHLRPASLELYWWQYXXXXXXXXXXXXXXXMVWSIQW-LVR 228
RH G HL+ + QY +W + W ++R
Sbjct: 464 RHRGARHLKSHGAFIPLHQYLLLDVLGCLLLGAFLAIW-LPWRMIR 508
|
|
| ZFIN|ZDB-GENE-080227-13 ugt1b4 "UDP glucuronosyltransferase 1 family, polypeptide B4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 86/200 (43%), Positives = 129/200 (64%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F++ S +G++ FS+GS++ S P +K F +AF IPQRV+W++ GE +
Sbjct: 297 EVEEFVNGSGEHGIVVFSLGSLVS--SMPKEKADIFFKAFSMIPQRVLWRYTGEIPNNVP 354
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
+ + L W PQ D+L HP + FI+HGG G E + GVP++ +P+FGDQ N+ V
Sbjct: 355 ENVKLMKWLPQNDLLGHPKARAFITHGGTHGIYEGICHGVPMVMLPLFGDQADNVHRVAT 414
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G GV L IT ET+L AL +V+ N SYK++ +K++ + DRP+ PLD A++W E V+
Sbjct: 415 RGVGVILSIHDITVETLLDALNSVINNSSYKQKMQKLSAIHNDRPIQPLDLAVFWTEFVM 474
Query: 184 RHGGGAHLRPASLELYWWQY 203
RH G HLRPA+ EL W QY
Sbjct: 475 RHKGADHLRPAAHELNWLQY 494
|
|
| ZFIN|ZDB-GENE-080227-11 ugt1b2 "UDP glucuronosyltransferase 1 family, polypeptide B2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 86/200 (43%), Positives = 129/200 (64%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F++ S +G++ FS+GS++ S P +K F +AF IPQRV+W++ GE +
Sbjct: 293 EVEEFVNGSGEHGIVVFSLGSLVS--SMPKEKADIFFKAFSMIPQRVLWRYTGEIPNNVP 350
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
+ + L W PQ D+L HP + FI+HGG G E + GVP++ +P+FGDQ N+ V
Sbjct: 351 ENVKLMKWLPQNDLLGHPKARAFITHGGTHGIYEGICHGVPMVMLPLFGDQADNVHRVAT 410
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G GV L IT ET+L AL +V+ N SYK++ +K++ + DRP+ PLD A++W E V+
Sbjct: 411 RGVGVILSIHDITVETLLDALNSVINNSSYKQKMQKLSAIHNDRPIQPLDLAVFWTEFVM 470
Query: 184 RHGGGAHLRPASLELYWWQY 203
RH G HLRPA+ EL W QY
Sbjct: 471 RHKGADHLRPAAHELNWLQY 490
|
|
| ZFIN|ZDB-GENE-080227-14 ugt1b5 "UDP glucuronosyltransferase 1 family, polypeptide B5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 86/200 (43%), Positives = 129/200 (64%)
Query: 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
++++F++ S +G++ FS+GS++ S P +K F +AF IPQRV+W++ GE +
Sbjct: 290 EVEEFVNGSGEHGIVVFSLGSLVS--SMPKEKADIFFKAFSMIPQRVLWRYTGEIPNNVP 347
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
+ + L W PQ D+L HP + FI+HGG G E + GVP++ +P+FGDQ N+ V
Sbjct: 348 ENVKLMKWLPQNDLLGHPKARAFITHGGTHGIYEGICHGVPMVMLPLFGDQADNVHRVAT 407
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183
G GV L IT ET+L AL +V+ N SYK++ +K++ + DRP+ PLD A++W E V+
Sbjct: 408 RGVGVILSIHDITVETLLDALNSVINNSSYKQKMQKLSAIHNDRPIQPLDLAVFWTEFVM 467
Query: 184 RHGGGAHLRPASLELYWWQY 203
RH G HLRPA+ EL W QY
Sbjct: 468 RHKGADHLRPAAHELNWLQY 487
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 244 | |||
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 2e-60 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 9e-53 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 6e-24 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 1e-22 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 2e-19 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 4e-12 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 6e-12 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 2e-10 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 2e-10 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 4e-10 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 7e-10 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 1e-09 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 1e-09 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 2e-09 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 3e-09 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 5e-09 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 8e-09 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 4e-08 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 5e-08 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 3e-07 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 3e-07 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 4e-07 | |
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 5e-07 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 7e-06 | |
| COG0707 | 357 | COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acety | 7e-05 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 2e-04 | |
| TIGR00661 | 321 | TIGR00661, MJ1255, conserved hypothetical protein | 0.001 | |
| pfam13528 | 317 | pfam13528, Glyco_trans_1_3, Glycosyl transferase f | 0.001 | |
| TIGR01133 | 348 | TIGR01133, murG, undecaprenyldiphospho-muramoylpen | 0.001 | |
| cd03785 | 350 | cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl | 0.003 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 2e-60
Identities = 85/206 (41%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Query: 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQ 74
+GV+ FS+GS++ + P +K A QIPQ+V+W+++G S L W PQ
Sbjct: 276 HGVVVFSLGSMV--SNIPEEKANEIASALAQIPQKVLWRFDGTKPSTLGRNTRLVKWLPQ 333
Query: 75 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134
D+L HP + F++H G G EA+ GVP++G+P+FGDQ N + +E G VTL
Sbjct: 334 NDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLNVLT 393
Query: 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPA 194
+T E +L AL+TV+ +PSYK+ +++ + D+P+ PLD A++WIE V+RH G HLRPA
Sbjct: 394 MTSEDLLNALKTVINDPSYKENIMRLSSIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRPA 453
Query: 195 SLELYWWQYILLDVIIALILLIAAMV 220
+ +L W+QY LDVI L+ +A +
Sbjct: 454 AHDLTWYQYHSLDVIGFLLACVATVA 479
|
Length = 500 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 9e-53
Identities = 70/216 (32%), Positives = 122/216 (56%), Gaps = 2/216 (0%)
Query: 6 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI-D 64
+++FL+ S NGV+Y S GS I ++ + LR F+++P V+WK++GE + +
Sbjct: 287 LEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPA 346
Query: 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA 124
+L + W PQR +L H NVK F++ GG T EA+ + VP++G+PM GDQ N +
Sbjct: 347 NVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL 406
Query: 125 GFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
G G L ++ +++A+ V+ NP Y+K +++ L + +PM PL AI++ EHVIR
Sbjct: 407 GIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVIR 466
Query: 185 HGGGA-HLRPASLELYWWQYILLDVIIALILLIAAM 219
+ G L+ + + + Y + +++ L+
Sbjct: 467 NKHGNTSLKTKAANVSYSDYFMSYILVPLVTFTVMN 502
|
Length = 507 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 6e-24
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI--DKILLKSWAP 73
++Y S+G++ L A + RVI G + D +++ + P
Sbjct: 238 PIVYVSLGTVGNAVEL----LAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVP 293
Query: 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133
Q ++L P I HGG T+EALY+GVP++ IP DQ N VE+ G G+ LP++
Sbjct: 294 QLELL--PRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFE 351
Query: 134 QITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGG 188
++TEE + A+ VL + SY++ AE++A F + A +E R
Sbjct: 352 ELTEERLRAAVNEVLADDSYRRAAERLAEEF--KEEDGPAKAADLLEEFAREKKK 404
|
Length = 406 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-22
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGENMSGKIDKILLKSWAPQ 74
+Y GS+ P + + A + QR I W G D + + + P
Sbjct: 241 PVYVGFGSM--VVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVPH 298
Query: 75 RDILDHPNVKVFISHGGFLGTT-EALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133
+L P + HGG GTT AL +GVP + +P FGDQ V + G G L
Sbjct: 299 DWLL--PRCAAVVHHGGA-GTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPR 355
Query: 134 QITEETVLVALRTVLGNPSYKKRAEKVARL 163
++T E + ALR +L PS ++ A + R+
Sbjct: 356 ELTAERLAAALRRLLDPPSRRRAAALLRRI 385
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 2e-19
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK-ID---------KI 66
V+ S+G++ + PS R + AF + V+ G+ +D +
Sbjct: 227 VVLISLGTVFN--NQPSFYR-TCVEAFRDLDWHVVL------SVGRGVDPADLGELPPNV 277
Query: 67 LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGF 126
++ W PQ +IL + FI+HGG T EAL++GVP++ +P DQ R + + G
Sbjct: 278 EVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGL 335
Query: 127 GVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLF 164
G LP +++T E + A+ VL +P Y +R K+
Sbjct: 336 GRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEI 373
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 4e-12
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 30/180 (16%)
Query: 6 IKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK-- 62
I ++LD+ + V++ GS+ S P+ + K +A E + R +W N +
Sbjct: 270 IMRWLDDQPESSVVFLCFGSL---GSLPAPQIKEIAQALELVGCRFLWSIR-TNPAEYAS 325
Query: 63 -------------IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP 109
+ + L+ WAPQ +IL H + F+SH G+ E+L+ GVPI P
Sbjct: 326 PYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP 385
Query: 110 MFGDQKAN-IRVVEKAGFGVTLPYDQITEETVLV-------ALRTVL--GNPSYKKRAEK 159
M+ +Q+ N +V++ G V L D ++ +V A+R+++ + KK E
Sbjct: 386 MYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEI 445
|
Length = 475 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 6e-12
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 2 NETDIKKFLDESVNGVIYFSMGS--------IIQGKSFPSDKRKAFLRAFEQIPQRVIWK 53
N++ I+ + N VI+ S+GS +++ S + FL P V
Sbjct: 251 NKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIR--PGSVRGS 308
Query: 54 WEGENMSGKIDKILLK-----SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGI 108
E++ + KI+ WAPQ+++L HP V F SH G+ T E++ GVP+I
Sbjct: 309 EWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICK 368
Query: 109 PMFGDQKANIRVVE 122
P DQK N R +E
Sbjct: 369 PFSSDQKVNARYLE 382
|
Length = 451 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 59.9 bits (145), Expect = 2e-10
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 34/192 (17%)
Query: 1 MNETDIKKFLD-ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW------- 52
++E + K+LD + + VIY S GS SF +++ E Q IW
Sbjct: 270 IDEQECLKWLDSKKPDSVIYLSFGS---VASFKNEQLFEIAAGLEGSGQNFIWVVRKNEN 326
Query: 53 -----KW--EG--ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGV 103
+W EG E GK ++++ WAPQ ILDH F++H G+ E + +G+
Sbjct: 327 QGEKEEWLPEGFEERTKGK--GLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGL 384
Query: 104 PIIGIPMFGDQKANIRVVEK---------AGFGVTLPYDQITEETVLVALRTVLGNPSY- 153
P++ P+ +Q N ++V + A V + D I+ E V A+R V+
Sbjct: 385 PMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAE 444
Query: 154 --KKRAEKVARL 163
+ RA+K+A +
Sbjct: 445 ERRLRAKKLAEM 456
|
Length = 482 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 2e-10
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 70 SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN 117
+WAPQ++IL H V F++H G+ E+L+ GVP+ P++ +Q N
Sbjct: 345 TWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLN 392
|
Length = 480 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 4e-10
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 2 NETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS 60
NE D ++LD V+Y S+GS + S D+ A LR R +W GE
Sbjct: 260 NEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGV---RFLWVARGEASR 316
Query: 61 GKI---DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN 117
K D L+ W Q +L H +V F +H G+ T EA+++GVP++ P+F DQ N
Sbjct: 317 LKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376
Query: 118 IR-VVE--KAGFGVTLPYDQITEETVLV 142
+ +VE K G+ V ++ EET++
Sbjct: 377 SKLIVEDWKIGWRVK---REVGEETLVG 401
|
Length = 459 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 7e-10
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 31/174 (17%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW----------KWEGENMSGKIDKI 66
VIY S G++++ + + RA + + +W K EGE + +I+KI
Sbjct: 263 VIYVSFGTMVE---LSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEET-EIEKI 318
Query: 67 -----------LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQK 115
++ SW Q ++L H V F++H G+ + E+L GVP++ PM+ DQ
Sbjct: 319 AGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQP 378
Query: 116 ANIRVVE---KAGFGVTLPYDQITEE-TVLVALRTVLGNPSYKKR--AEKVARL 163
AN +++E K G V + + E + L V+ S + R AEK RL
Sbjct: 379 ANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRL 432
|
Length = 455 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 1e-09
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKA 124
+L+K WAPQ IL HP + F++H G+ T E + SGVP+I P+F +Q N + +VE
Sbjct: 346 LLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVL 405
Query: 125 GFGVTL 130
GV +
Sbjct: 406 RIGVRV 411
|
Length = 491 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 1e-09
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN 117
DK + W PQ +L HP+V F++H G+ T EAL SGVP++ P +GDQ +
Sbjct: 337 DKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTD 390
|
Length = 480 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 2e-09
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 5 DIKKFLDESVNG-VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS--- 60
++ K+LD+ V++ GS+ K E R +W E ++
Sbjct: 264 ELMKWLDDQPEASVVFLCFGSM---GRLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDD 320
Query: 61 ----GKIDKI----LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG 112
G +D++ ++ W+PQ +IL H V F+SH G+ E+L+ GVPI+ PM+
Sbjct: 321 LLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYA 380
Query: 113 DQKAN-IRVVEKAGFGVTLPYDQ-------ITEETVLVALRTVLG--NPSYKKRAEKVAR 162
+Q+ N +V++ V L D + + A+R V+ N +KR +++
Sbjct: 381 EQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQ 440
Query: 163 LFQ 165
+ Q
Sbjct: 441 MIQ 443
|
Length = 468 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 56.1 bits (135), Expect = 3e-09
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 67 LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAG 125
++ SWAPQ +IL H V F++H G+ T E++ GVP+I P+F +Q N ++ ++ G
Sbjct: 341 VVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELG 400
Query: 126 FGVTL--PYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
V P + I+ + +R V+ ++ KV +L
Sbjct: 401 IAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKL 440
|
Length = 481 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 5e-09
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 70 SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN-IRVVEKAGFGV 128
WAPQ +L P + F++H G+ E+L+ GVP+ P++ +QK N +VE+ G V
Sbjct: 348 GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAV 407
Query: 129 ----TLPYDQITEETVLV 142
D + E V
Sbjct: 408 EIRKYWRGDLLAGEMETV 425
|
Length = 481 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 8e-09
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Query: 8 KFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW----KWEGENMSG- 61
++LD+ + V+Y S GS+++ ++ + +A + +W K + +N+
Sbjct: 261 EWLDKQARSSVVYISFGSMLESLE---NQVETIAKALKNRGVPFLWVIRPKEKAQNVQVL 317
Query: 62 ----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN 117
K + ++ W+PQ IL H + F++H G+ T E + +GVP++ P + DQ +
Sbjct: 318 QEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPID 377
Query: 118 IR-VVEKAGFGVTLPYDQITEE 138
R +V+ G GV + D + E
Sbjct: 378 ARLLVDVFGIGVRMRNDAVDGE 399
|
Length = 456 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 4e-08
Identities = 21/66 (31%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN-IRVVEKA 124
+++KSWAPQ +L+H V F++H G+ EA+ +GVP++ P++ +Q+ N + +V++
Sbjct: 336 MVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEI 395
Query: 125 GFGVTL 130
+++
Sbjct: 396 KIAISM 401
|
Length = 451 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 5e-08
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 4 TDIKKFLD-ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK 62
IK++LD + VN V+Y ++G+ S ++ E+ W E + +
Sbjct: 266 VRIKEWLDKQRVNSVVYVALGT---EASLRREEVTELALGLEKSETPFFWVLRNEPGTTQ 322
Query: 63 IDKILLKS---------------WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIG 107
+L W PQ IL H +V F++H G+ E L G +I
Sbjct: 323 NALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLIL 382
Query: 108 IPMFGDQKANIRVVEKAGFGVTLPYDQ----ITEETVLVALRTVL---GNPSYKKRAEKV 160
P+ +Q N R++ G+ +P D+ T ++V ++R + + +A+++
Sbjct: 383 FPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEM 442
Query: 161 ARLFQDR 167
LF D
Sbjct: 443 RNLFGDM 449
|
Length = 472 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 50.5 bits (120), Expect = 3e-07
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG 125
+++ WAPQ +IL H ++ F+SH G+ E+L GVPI+ P++ +Q N ++ +
Sbjct: 337 LVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEE- 395
Query: 126 FGVTLPYDQITEETVL 141
GV + ++ E V+
Sbjct: 396 IGVAVRTSELPSEKVI 411
|
Length = 470 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 3e-07
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKAN---IRV 120
DK L+ W+PQ +L + + F++H G+ T E L GVP++ +P + DQ N I+
Sbjct: 317 DKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQD 376
Query: 121 VEKAGFGV 128
V K G V
Sbjct: 377 VWKVGVRV 384
|
Length = 449 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 4e-07
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW----KWEGENMSGKIDKIL--- 67
N VIY S GS + + A E + IW W G ++++
Sbjct: 273 NSVIYISFGSWVS--PIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQG 330
Query: 68 -LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAG 125
+ SWAPQ ++L H V +++H G+ T EA+ ++ P+ GDQ N +V+
Sbjct: 331 KVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWK 390
Query: 126 FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPM 169
GV + ++ V LR V+ + +R K+ ++R M
Sbjct: 391 IGVRI--SGFGQKEVEEGLRKVMEDSGMGERLMKL----RERAM 428
|
Length = 448 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 5e-07
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV 121
++++ WAPQ IL H V F++H G+ E L +GVP++ PM DQ N ++
Sbjct: 345 LVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLL 400
|
Length = 477 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 7e-06
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 71 WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV 121
W Q IL HP+V F+SH GF E+L S I+ +P GDQ N R++
Sbjct: 324 WVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLL 374
|
Length = 453 |
| >gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 87 ISHGGFLGTTEALYSGVPIIGIP----MFGDQKANIRVVEKAGFGVTLPYDQITEETVLV 142
IS G L E L GVP I +P G Q+ N + +EKAG + + ++T E +
Sbjct: 257 ISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAE 316
Query: 143 ALRTVLGNPS-YKKRAEKVARLFQ 165
+ +L NP K AE +L +
Sbjct: 317 LILRLLSNPEKLKAMAENAKKLGK 340
|
Length = 357 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 2e-04
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 66 ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV 121
I+ + W Q IL HP+V F++H GF E+L S I+ IP DQ R++
Sbjct: 314 IVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLL 369
|
Length = 446 |
| >gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.001
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPY 132
N ++ I+HGGF +EAL G P+I IP G +Q N +E G G+ L Y
Sbjct: 247 NAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases [Hypothetical proteins, Conserved]. Length = 321 |
| >gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 86 FISHGGFLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETV 140
I + GF +EALY G P++ +P+ G +Q +N +E+ G+G+ + + + +
Sbjct: 253 VICNAGFELLSEALYLGKPLLLVPLDGQFEQTSNALYLERLGYGIVMDMEDLDPAVL 309
|
Length = 317 |
| >gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 87 ISHGGFLGTTEALYSGVPIIGIPM---FGDQKANIRVVEKAGFGVTLPYDQITEETVLVA 143
IS G E +GVP I IP DQ N + +E G G+ + ++ E +L A
Sbjct: 255 ISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEA 314
Query: 144 LRTVLGNP----SYKKRAEKVAR 162
L +L +P + + A K+A+
Sbjct: 315 LLKLLLDPANLEAMAEAARKLAK 337
|
RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 348 |
| >gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Score = 37.8 bits (89), Expect = 0.003
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 97 EALYSGVPIIGIP----MFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152
E G+P I IP Q AN R + KAG V +P +++T E + AL +L +P
Sbjct: 267 ELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPE 326
Query: 153 YKKRAEKVAR 162
K + AR
Sbjct: 327 RLKAMAEAAR 336
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 244 | |||
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| KOG1192|consensus | 496 | 100.0 | ||
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.98 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 99.98 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 99.98 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 99.97 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 99.97 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 99.97 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 99.97 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 99.97 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 99.97 | |
| PLN02764 | 453 | glycosyltransferase family protein | 99.97 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 99.97 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 99.97 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 99.97 | |
| PLN00414 | 446 | glycosyltransferase family protein | 99.97 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 99.96 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 99.95 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.95 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 99.95 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.73 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.73 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.72 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.69 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.68 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.61 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.43 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.42 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.37 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.3 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.29 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.13 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.13 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.02 | |
| KOG3349|consensus | 170 | 99.01 | ||
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 98.89 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.84 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.82 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 98.69 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 98.6 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 98.55 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 98.54 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 98.53 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 98.49 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 98.48 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 98.44 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.43 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 98.42 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 98.42 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 98.39 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.35 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.33 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.33 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.32 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 98.32 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.29 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 98.29 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 98.25 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 98.24 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.23 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 98.23 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.21 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 98.2 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 98.19 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.17 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 98.15 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.11 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.11 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.09 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 98.09 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.08 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.05 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 97.99 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.97 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 97.96 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.95 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 97.93 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 97.92 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 97.92 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 97.89 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.88 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 97.86 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 97.85 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 97.84 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 97.83 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 97.82 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 97.82 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 97.66 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 97.6 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 97.53 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 97.52 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 97.46 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 97.44 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 97.27 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.26 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.19 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 97.14 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.1 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 97.08 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 97.07 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.95 | |
| KOG4626|consensus | 966 | 96.94 | ||
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 96.93 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 96.86 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 96.84 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 96.75 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 96.69 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 96.64 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 96.62 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 96.58 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 96.57 | |
| PLN00142 | 815 | sucrose synthase | 96.39 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 96.31 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 96.22 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 96.02 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 96.01 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 95.89 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.19 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 95.15 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 95.1 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 95.06 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 94.75 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 94.62 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 94.55 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 94.49 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.3 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 94.25 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 94.06 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 93.15 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 93.04 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 92.98 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 92.98 | |
| PLN02316 | 1036 | synthase/transferase | 92.66 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 92.47 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 92.42 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 91.87 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 91.45 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 91.44 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 90.44 | |
| PRK02155 | 291 | ppnK NAD(+)/NADH kinase family protein; Provisiona | 90.27 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 90.11 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 89.83 | |
| TIGR00730 | 178 | conserved hypothetical protein, DprA/Smf-related, | 89.34 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 88.95 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 88.53 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 87.95 | |
| PRK14077 | 287 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 87.9 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 87.74 | |
| TIGR00725 | 159 | conserved hypothetical protein, DprA/Smf-related, | 87.58 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 87.32 | |
| KOG0853|consensus | 495 | 87.13 | ||
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 87.09 | |
| PRK04885 | 265 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 86.43 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 86.26 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 86.08 | |
| PRK02649 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 84.19 | |
| PRK03372 | 306 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 83.75 | |
| PRK01231 | 295 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 83.1 | |
| PRK03378 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 82.39 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 81.14 | |
| PRK01911 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 80.76 |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-60 Score=434.80 Aligned_cols=232 Identities=47% Similarity=0.863 Sum_probs=142.9
Q ss_pred chHHHHHHhc-CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCC
Q psy16503 3 ETDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP 81 (244)
Q Consensus 3 p~~l~~~l~~-~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~ 81 (244)
|++++.|+++ +++|+|||||||... .++.+..+.++++|+++|++|||++++......|+|+++.+|+||.++|+||
T Consensus 263 ~~~~~~~~~~~~~~~vv~vsfGs~~~--~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l~~n~~~~~W~PQ~~lL~hp 340 (500)
T PF00201_consen 263 PEELWNFLDSSGKKGVVYVSFGSIVS--SMPEEKLKEIAEAFENLPQRFIWKYEGEPPENLPKNVLIVKWLPQNDLLAHP 340 (500)
T ss_dssp HHHHHHHTSTTTTTEEEEEE-TSSST--T-HHHHHHHHHHHHHCSTTEEEEEETCSHGCHHHTTEEEESS--HHHHHTST
T ss_pred ccccchhhhccCCCCEEEEecCcccc--hhHHHHHHHHHHHHhhCCCcccccccccccccccceEEEeccccchhhhhcc
Confidence 5789999998 568999999999974 4788889999999999999999999985556678999999999999999999
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
++++||||||+||+.||+++|||+|++|+++||+.||+++++.|+|+.++.++++.++|.++|+++++|++|++||++++
T Consensus 341 ~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~y~~~a~~ls 420 (500)
T PF00201_consen 341 RVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENPSYKENAKRLS 420 (500)
T ss_dssp TEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred cceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCChHHHHHHHHHHHHHcCCCCCCCcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy16503 162 RLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALITYYN 236 (244)
Q Consensus 162 ~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (244)
++++++|.+|.++|++|+||++||+|++||++.+.+|+|||||+|||+++++++++++++++++++++++++..+
T Consensus 421 ~~~~~~p~~p~~~~~~~ie~v~~~~~~~~l~~~~~~l~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (500)
T PF00201_consen 421 SLFRDRPISPLERAVWWIEYVARHGGAPHLRSPARDLSFYQYYLLDVIAFLLLIILLIIYIIFKICRFVCRKCVK 495 (500)
T ss_dssp HTTT-----------------------------------------------------------------------
T ss_pred HHHhcCCCCHHHHHHHHHHHHHhcCCCcccCChhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999988888777777777766665555433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-53 Score=391.34 Aligned_cols=211 Identities=33% Similarity=0.673 Sum_probs=200.6
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCC-CCCCCEEEeccCChhhhhCCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-GKIDKILLKSWAPQRDILDHP 81 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~-~~~~nv~~~~~~pq~~lL~h~ 81 (244)
|+++++|++++++|+|||||||...+..++.+.++.+++++++++++|||+++++..+ +.|+|+++.+|+||.++|+||
T Consensus 284 ~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp 363 (507)
T PHA03392 284 DDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHK 363 (507)
T ss_pred CHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCC
Confidence 5789999998877899999999987667899999999999999999999999865444 678999999999999999999
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
++++||||||.||++||+++|||+|++|+++||+.||++++++|+|+.++..+++.++|.++|+++++|++|+++|++++
T Consensus 364 ~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls 443 (507)
T PHA03392 364 NVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKELR 443 (507)
T ss_pred CCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCChHHHHHHHHHHHHHcC-CCCCCCcccCCccHHHHHHHHHHHHHH
Q psy16503 162 RLFQDRPMPPLDTAIYWIEHVIRHG-GGAHLRPASLELYWWQYILLDVIIALI 213 (244)
Q Consensus 162 ~~~~~~~~~~~~~a~~~ie~~~~~~-~~~~l~~~~~~~~~~~~~~lDv~~~~~ 213 (244)
+.++++|.+|.++|++|+||++||+ |++|||+++.+|+|||||+|||+++++
T Consensus 444 ~~~~~~p~~~~~~av~~iE~v~r~~~g~~~lr~~~~~l~~~qy~~lDv~~~~~ 496 (507)
T PHA03392 444 HLIRHQPMTPLHKAIWYTEHVIRNKHGNTSLKTKAANVSYSDYFMSYILVPLV 496 (507)
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhCCCCcccccccccCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999986653
|
|
| >KOG1192|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=303.31 Aligned_cols=207 Identities=36% Similarity=0.741 Sum_probs=188.1
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCCC-------CCC-CCCCEEEeccCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGEN-------MSG-KIDKILLKSWAP 73 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~~-------~~~-~~~nv~~~~~~p 73 (244)
+.++.++++.+.+++|||||||...+..++++...+++.+++++ +.+|+|++.... .++ .+.||...+|+|
T Consensus 265 ~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~P 344 (496)
T KOG1192|consen 265 PLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAP 344 (496)
T ss_pred cHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCC
Confidence 34566666654458999999999877789999999999999999 568999998632 223 256899999999
Q ss_pred hhhh-hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 74 QRDI-LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 74 q~~l-L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
|.++ |.|+++++||||||+||+.|++++|||++++|+++||+.||+++++.|.|.++++.+++.+++.+++.+++.+++
T Consensus 345 Q~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~ 424 (496)
T KOG1192|consen 345 QNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEE 424 (496)
T ss_pred cHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChH
Confidence 9998 589999999999999999999999999999999999999999999999999999888877779999999999999
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCCCcccCCccHHHHHHHHHHHH
Q psy16503 153 YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIA 211 (244)
Q Consensus 153 y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~ 211 (244)
|+++++++++.++++|.+| +.+++|+|++.++++++++++. .+++|++|+++|++.+
T Consensus 425 y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~~~~~~~~~l~~~-~~~~~~~~~~~d~~~~ 481 (496)
T KOG1192|consen 425 YKEAAKRLSEILRDQPISP-ELAVKWVEFVARHGGAKHLKEA-AHLSFIEYGSLDVIAF 481 (496)
T ss_pred HHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHhcCCCcccCcc-ccCChhhhhhhHHHHH
Confidence 9999999999999999999 9999999999999999999998 8999999999999977
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=260.87 Aligned_cols=177 Identities=23% Similarity=0.412 Sum_probs=151.5
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-C-----CCCCCCC---------EE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N-----MSGKIDK---------IL 67 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~-----~~~~~~n---------v~ 67 (244)
+++.+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|++... . ....|++ +.
T Consensus 266 ~~~~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~v 342 (472)
T PLN02670 266 VRIKEWLDKQRVNSVVYVALGTEAS---LRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMI 342 (472)
T ss_pred HHHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeE
Confidence 46889999975 7999999999964 889999999999999999999999742 1 1123433 78
Q ss_pred EeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC----CCCHHHHHHH
Q psy16503 68 LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD----QITEETVLVA 143 (244)
Q Consensus 68 ~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~----~~~~~~l~~a 143 (244)
+.+|+||.++|.|+.+++||||||+||+.||+++|||||++|+++||+.||+++++.|+|+.++.. .++.+++.++
T Consensus 343 v~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~a 422 (472)
T PLN02670 343 HVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAES 422 (472)
T ss_pred EeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999999653 3889999999
Q ss_pred HHHHhCCh---hHHHHHHHHHHHHhCCCCChHHHHHHH-HHHHHHc
Q psy16503 144 LRTVLGNP---SYKKRAEKVARLFQDRPMPPLDTAIYW-IEHVIRH 185 (244)
Q Consensus 144 i~~ll~~~---~y~~~a~~~s~~~~~~~~~~~~~a~~~-ie~~~~~ 185 (244)
|+++|.++ +||++|+++++.+++++. .+.+++- +.++.+.
T Consensus 423 v~~vm~~~~g~~~r~~a~~l~~~~~~~~~--~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 423 VRLAMVDDAGEEIRDKAKEMRNLFGDMDR--NNRYVDELVHYLREN 466 (472)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHhCcch--hHHHHHHHHHHHHHh
Confidence 99999876 799999999999999653 4445544 4444443
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=256.87 Aligned_cols=180 Identities=23% Similarity=0.471 Sum_probs=149.4
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-----------------CCC---
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-----------------MSG--- 61 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-----------------~~~--- 61 (244)
++++.+|+++.+ +++|||||||... ++.+.+++++.+|+..+++|||+++... ++.
T Consensus 261 ~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~ 337 (481)
T PLN02554 261 QSEILRWLDEQPPKSVVFLCFGSMGG---FSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFL 337 (481)
T ss_pred chHHHHHHhcCCCCcEEEEecccccc---CCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHH
Confidence 357999999875 6899999999843 7889999999999999999999986410 111
Q ss_pred --CCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHH-HHHHcCceeecCC------
Q psy16503 62 --KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAGFGVTLPY------ 132 (244)
Q Consensus 62 --~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~-~~~~~G~g~~l~~------ 132 (244)
.++|.++.+|+||.++|.|+.+++||||||+||+.||+++|||||++|+++||+.||+ ++++.|+|+.++.
T Consensus 338 ~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~ 417 (481)
T PLN02554 338 DRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDL 417 (481)
T ss_pred HHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccc
Confidence 3457788999999999999999999999999999999999999999999999999995 5778899999863
Q ss_pred -----CCCCHHHHHHHHHHHhC-ChhHHHHHHHHHHHHhC---CCCChHHHHHHHHHHHHHc
Q psy16503 133 -----DQITEETVLVALRTVLG-NPSYKKRAEKVARLFQD---RPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 133 -----~~~~~~~l~~ai~~ll~-~~~y~~~a~~~s~~~~~---~~~~~~~~a~~~ie~~~~~ 185 (244)
..++.++|.++|+++|. |++||++++++++.+++ ...+........|+.+.++
T Consensus 418 ~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 418 LAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred cccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 35799999999999996 78999999999998874 2223333444555555443
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=249.73 Aligned_cols=160 Identities=28% Similarity=0.522 Sum_probs=140.9
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------CC-C----CCCCEEEecc
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------MS-G----KIDKILLKSW 71 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~~-~----~~~nv~~~~~ 71 (244)
+++.+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|++++.. ++ + .++|..+.+|
T Consensus 263 ~~~~~WLd~~~~~sVVyvSfGS~~~---~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W 339 (468)
T PLN02207 263 DELMKWLDDQPEASVVFLCFGSMGR---LRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGW 339 (468)
T ss_pred hHHHHHHhcCCCCcEEEEEeccCcC---CCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEe
Confidence 57999999875 6999999999864 7899999999999999999999998421 11 1 3567888999
Q ss_pred CChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecC------CC-CCCHHHHHHH
Q psy16503 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLP------YD-QITEETVLVA 143 (244)
Q Consensus 72 ~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~------~~-~~~~~~l~~a 143 (244)
+||.++|.|+++++||||||+||+.||+++|||||++|+++||+.||+++++ .|+|+.+. .+ .++.++|.++
T Consensus 340 ~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~a 419 (468)
T PLN02207 340 SPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETA 419 (468)
T ss_pred CCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998877 79998653 22 3488999999
Q ss_pred HHHHhC--ChhHHHHHHHHHHHHhC
Q psy16503 144 LRTVLG--NPSYKKRAEKVARLFQD 166 (244)
Q Consensus 144 i~~ll~--~~~y~~~a~~~s~~~~~ 166 (244)
|+++|. +++||++|++++++.++
T Consensus 420 v~~vm~~~~~~~r~~a~~l~~~a~~ 444 (468)
T PLN02207 420 IRCVMNKDNNVVRKRVMDISQMIQR 444 (468)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHH
Confidence 999997 68999999999998873
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=250.11 Aligned_cols=160 Identities=21% Similarity=0.430 Sum_probs=142.5
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--------CCCC-CC---------C
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--------NMSG-KI---------D 64 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--------~~~~-~~---------~ 64 (244)
++..+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|+++.. ...+ .| .
T Consensus 258 ~~c~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~ 334 (451)
T PLN03004 258 VSCLNWLDSQPEKSVVFLCFGSLGL---FSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDK 334 (451)
T ss_pred hHHHHHHHhCCCCceEEEEeccccc---CCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCC
Confidence 35789999874 7999999999944 899999999999999999999999842 1122 34 6
Q ss_pred CEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCC---CCCHHHH
Q psy16503 65 KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYD---QITEETV 140 (244)
Q Consensus 65 nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~---~~~~~~l 140 (244)
|+++.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++++ .|+|+.++.+ .++.++|
T Consensus 335 g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l 414 (451)
T PLN03004 335 GMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEV 414 (451)
T ss_pred cEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999986 5999999754 4699999
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHhC
Q psy16503 141 LVALRTVLGNPSYKKRAEKVARLFQD 166 (244)
Q Consensus 141 ~~ai~~ll~~~~y~~~a~~~s~~~~~ 166 (244)
.++|++++.|++|++++++++++.+.
T Consensus 415 ~~av~~vm~~~~~r~~a~~~~~~a~~ 440 (451)
T PLN03004 415 EKRVQEIIGECPVRERTMAMKNAAEL 440 (451)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876653
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=241.55 Aligned_cols=176 Identities=22% Similarity=0.327 Sum_probs=140.9
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHH--HhcCCCeEEEEecCC---CCCCCC---------CCEE
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRA--FEQIPQRVIWKWEGE---NMSGKI---------DKIL 67 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~a--l~~~~~~viw~~~~~---~~~~~~---------~nv~ 67 (244)
++++.+|||+.+ +++|||||||... ++.+.+.+++.. ++..|..++|+.+.. .....| .|+.
T Consensus 238 ~~~~~~wLd~~~~~sVvyvSfGS~~~---l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~ 314 (442)
T PLN02208 238 EEQWSHFLSGFPPKSVVFCSLGSQII---LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVV 314 (442)
T ss_pred HHHHHHHHhcCCCCcEEEEecccccc---CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcE
Confidence 467999999875 7999999999974 777766666665 455555666665411 112234 6899
Q ss_pred EeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCCC---CCHHHHHHH
Q psy16503 68 LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQ---ITEETVLVA 143 (244)
Q Consensus 68 ~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~~---~~~~~l~~a 143 (244)
+.+|+||.++|.|+++++||||||+||++||+++|||||++|+++||+.||+++++ .|+|+.++.++ ++.++|.++
T Consensus 315 v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~a 394 (442)
T PLN02208 315 WGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNA 394 (442)
T ss_pred eeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998776 79999997654 899999999
Q ss_pred HHHHhCChh-----HHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q psy16503 144 LRTVLGNPS-----YKKRAEKVARLFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 144 i~~ll~~~~-----y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~ 182 (244)
|++++.+++ +|++++++++.... +.+........++.+
T Consensus 395 i~~~m~~~~e~g~~~r~~~~~~~~~~~~-~gsS~~~l~~~v~~l 437 (442)
T PLN02208 395 IKSVMDKDSDLGKLVRSNHTKLKEILVS-PGLLTGYVDKFVEEL 437 (442)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 999997653 89999999888865 334444444445544
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=242.60 Aligned_cols=158 Identities=25% Similarity=0.384 Sum_probs=140.1
Q ss_pred HHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---CCCC-----CCCCEEEeccCChhh
Q psy16503 6 IKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---NMSG-----KIDKILLKSWAPQRD 76 (244)
Q Consensus 6 l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---~~~~-----~~~nv~~~~~~pq~~ 76 (244)
..+||++.+ +++|||||||.. ..++.+.+++++.+|+..+++|||++... .++. .++|+++.+|+||.+
T Consensus 263 c~~wLd~~~~~svvyvsfGS~~--~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~ 340 (448)
T PLN02562 263 CLGWLQEQKPNSVIYISFGSWV--SPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLE 340 (448)
T ss_pred HHHHHhcCCCCceEEEEecccc--cCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHH
Confidence 459999975 689999999985 24689999999999999999999998631 2332 467899999999999
Q ss_pred hhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 77 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 77 lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
+|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.+. +++.+++.++|+++|.|++||+
T Consensus 341 iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~~l~~~~~r~ 418 (448)
T PLN02562 341 VLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRKVMEDSGMGE 418 (448)
T ss_pred HhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999999999999999999999999999999875 8887774 5789999999999999999999
Q ss_pred HHHHHHHHHhCC
Q psy16503 156 RAEKVARLFQDR 167 (244)
Q Consensus 156 ~a~~~s~~~~~~ 167 (244)
+++++++.....
T Consensus 419 ~a~~l~~~~~~~ 430 (448)
T PLN02562 419 RLMKLRERAMGE 430 (448)
T ss_pred HHHHHHHHHHhc
Confidence 999998887653
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-31 Score=240.20 Aligned_cols=158 Identities=25% Similarity=0.445 Sum_probs=139.8
Q ss_pred HHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-----C----CCC-----CCCCEEEe
Q psy16503 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-----N----MSG-----KIDKILLK 69 (244)
Q Consensus 5 ~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-----~----~~~-----~~~nv~~~ 69 (244)
+..+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|+++.. + +++ .++|..+.
T Consensus 253 ~~~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~ 329 (451)
T PLN02410 253 SCIEWLNKQKKNSVIFVSLGSLAL---MEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIV 329 (451)
T ss_pred HHHHHHHhCCCCcEEEEEcccccc---CCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEE
Confidence 4578999975 7899999999964 788999999999999999999998732 1 221 34778999
Q ss_pred ccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHh
Q psy16503 70 SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 70 ~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
+|+||.++|.|+++++||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.++ ..++.++|.++|+++|
T Consensus 330 ~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~v~~av~~lm 408 (451)
T PLN02410 330 KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDRGAVERAVKRLM 408 (451)
T ss_pred ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999877 9999997 6789999999999999
Q ss_pred CCh---hHHHHHHHHHHHHhC
Q psy16503 149 GNP---SYKKRAEKVARLFQD 166 (244)
Q Consensus 149 ~~~---~y~~~a~~~s~~~~~ 166 (244)
.++ .||++++++++.++.
T Consensus 409 ~~~~~~~~r~~a~~l~~~~~~ 429 (451)
T PLN02410 409 VEEEGEEMRKRAISLKEQLRA 429 (451)
T ss_pred cCCcHHHHHHHHHHHHHHHHH
Confidence 775 588888888877764
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.8e-31 Score=239.56 Aligned_cols=160 Identities=26% Similarity=0.507 Sum_probs=136.1
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---------C-------CCC----C
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---------N-------MSG----K 62 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---------~-------~~~----~ 62 (244)
.++.+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|||++++. . .++ .
T Consensus 249 ~~~~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~ 325 (455)
T PLN02152 249 SSYTLWLDSKTESSVIYVSFGTMVE---LSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL 325 (455)
T ss_pred hHHHHHhhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhc
Confidence 36899999975 6999999999964 899999999999999999999998741 0 011 3
Q ss_pred CCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-Cceeec--CCC-CCCHH
Q psy16503 63 IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTL--PYD-QITEE 138 (244)
Q Consensus 63 ~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l--~~~-~~~~~ 138 (244)
++|.++.+|+||.++|.|+++++||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.+ +.+ .++.+
T Consensus 326 ~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e 405 (455)
T PLN02152 326 EEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERG 405 (455)
T ss_pred cCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHH
Confidence 56788899999999999999999999999999999999999999999999999999999983 555444 333 35899
Q ss_pred HHHHHHHHHhCChh--HHHHHHHHHHHHhC
Q psy16503 139 TVLVALRTVLGNPS--YKKRAEKVARLFQD 166 (244)
Q Consensus 139 ~l~~ai~~ll~~~~--y~~~a~~~s~~~~~ 166 (244)
+|.++|+++|.|+. +|++++++++..+.
T Consensus 406 ~l~~av~~vm~~~~~~~r~~a~~~~~~~~~ 435 (455)
T PLN02152 406 EIRRCLEAVMEEKSVELRESAEKWKRLAIE 435 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999999997654 79999777766553
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-31 Score=240.01 Aligned_cols=159 Identities=24% Similarity=0.442 Sum_probs=136.5
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC------------------C-CC-CC
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE------------------N-MS-GK 62 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~------------------~-~~-~~ 62 (244)
++..+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|||++... + .. ..
T Consensus 251 ~~c~~wLd~~~~~sVvyvsfGS~~~---l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 327 (481)
T PLN02992 251 HPVLDWLNKQPNESVLYISFGSGGS---LSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYL 327 (481)
T ss_pred HHHHHHHHcCCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhC
Confidence 35889999874 7999999999944 899999999999999999999999521 0 01 13
Q ss_pred CC---------CEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCC
Q psy16503 63 ID---------KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPY 132 (244)
Q Consensus 63 ~~---------nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~ 132 (244)
|+ ++.+.+|+||.++|.|+++.+||||||+||+.||+++|||||++|+++||+.||++++ +.|+|+.++.
T Consensus 328 p~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 407 (481)
T PLN02992 328 PEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDD 407 (481)
T ss_pred CHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecC
Confidence 43 5899999999999999999999999999999999999999999999999999999995 8899999976
Q ss_pred C--CCCHHHHHHHHHHHhCCh---hHHHHHHHHHHHHh
Q psy16503 133 D--QITEETVLVALRTVLGNP---SYKKRAEKVARLFQ 165 (244)
Q Consensus 133 ~--~~~~~~l~~ai~~ll~~~---~y~~~a~~~s~~~~ 165 (244)
. .++.++|.++|++++.++ .++++++++++..+
T Consensus 408 ~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~ 445 (481)
T PLN02992 408 PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAE 445 (481)
T ss_pred CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 3 489999999999999763 56677766665554
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=239.56 Aligned_cols=161 Identities=29% Similarity=0.462 Sum_probs=138.9
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--------CCCC------CCCCEE
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--------NMSG------KIDKIL 67 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--------~~~~------~~~nv~ 67 (244)
++++.+|+++.+ +++|||||||... ++.+.+.+++.+|+..+++|+|+++.. .+++ .+.|++
T Consensus 272 ~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~ 348 (482)
T PLN03007 272 EQECLKWLDSKKPDSVIYLSFGSVAS---FKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLI 348 (482)
T ss_pred hhHHHHHHhcCCCCceEEEeecCCcC---CCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEE
Confidence 467899999874 7899999999954 677889999999999999999998742 1232 356899
Q ss_pred EeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH---HcCceeec------CCCCCCHH
Q psy16503 68 LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE---KAGFGVTL------PYDQITEE 138 (244)
Q Consensus 68 ~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~---~~G~g~~l------~~~~~~~~ 138 (244)
+.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||++++ +.|+|+.. +...++.+
T Consensus 349 v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 428 (482)
T PLN03007 349 IRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISRE 428 (482)
T ss_pred EecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHH
Confidence 9999999999999999999999999999999999999999999999999999886 45666532 33567999
Q ss_pred HHHHHHHHHhCCh---hHHHHHHHHHHHHhC
Q psy16503 139 TVLVALRTVLGNP---SYKKRAEKVARLFQD 166 (244)
Q Consensus 139 ~l~~ai~~ll~~~---~y~~~a~~~s~~~~~ 166 (244)
+|.++|++++.++ +||++++++++..++
T Consensus 429 ~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~ 459 (482)
T PLN03007 429 KVEKAVREVIVGEEAEERRLRAKKLAEMAKA 459 (482)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 899999999887764
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=236.16 Aligned_cols=179 Identities=25% Similarity=0.379 Sum_probs=148.3
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---------CCC-----CCCCCEEE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---------NMS-----GKIDKILL 68 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---------~~~-----~~~~nv~~ 68 (244)
+++.+||++.+ +++|||||||... ++.+.+.+++.+++..+++|||+++.. .++ ..++|..+
T Consensus 265 ~~~~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v 341 (480)
T PLN02555 265 DDCIEWLDSKPPSSVVYISFGTVVY---LKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKI 341 (480)
T ss_pred hhHHHHHhCCCCCceeEEEeccccC---CCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEE
Confidence 56889999975 6799999999864 788999999999999999999997621 122 23468899
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecC-----CCCCCHHHHHH
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLP-----YDQITEETVLV 142 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~-----~~~~~~~~l~~ 142 (244)
.+|+||.++|.|+++++||||||+||+.||+++|||||++|+++||+.||+++++. |+|+.+. ...++.+++.+
T Consensus 342 ~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~ 421 (480)
T PLN02555 342 VQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAE 421 (480)
T ss_pred EecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987 9999993 34678999999
Q ss_pred HHHHHhCC---hhHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHc
Q psy16503 143 ALRTVLGN---PSYKKRAEKVARLFQDR---PMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 143 ai~~ll~~---~~y~~~a~~~s~~~~~~---~~~~~~~a~~~ie~~~~~ 185 (244)
+|+++|.+ ..+|++|++++++.+.- ..+.-......|+++.+.
T Consensus 422 ~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 422 CLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99999976 46899999988775431 123334445566666544
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=238.42 Aligned_cols=160 Identities=26% Similarity=0.499 Sum_probs=137.5
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------CCCCCCC--------EEE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------MSGKIDK--------ILL 68 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~~~~~~n--------v~~ 68 (244)
+++.+||++.+ +++|||||||... ++.+.+++++.+|+..+++|||+++... ....|++ .++
T Consensus 268 ~~~~~wld~~~~~svvyvsfGS~~~---~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v 344 (475)
T PLN02167 268 DRIMRWLDDQPESSVVFLCFGSLGS---LPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLV 344 (475)
T ss_pred HHHHHHHhcCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeee
Confidence 57899999875 6899999999844 6888999999999999999999987421 1123443 367
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHH-HHHcCceeecCC-------CCCCHHHH
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV-VEKAGFGVTLPY-------DQITEETV 140 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~-~~~~G~g~~l~~-------~~~~~~~l 140 (244)
.+|+||.++|.|+.+++||||||+||+.||+++|||||++|+++||+.||++ +++.|+|+.+.. ..++.++|
T Consensus 345 ~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l 424 (475)
T PLN02167 345 CGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEI 424 (475)
T ss_pred eccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHH
Confidence 8999999999999999999999999999999999999999999999999976 678899998853 24689999
Q ss_pred HHHHHHHhCCh-hHHHHHHHHHHHHhC
Q psy16503 141 LVALRTVLGNP-SYKKRAEKVARLFQD 166 (244)
Q Consensus 141 ~~ai~~ll~~~-~y~~~a~~~s~~~~~ 166 (244)
.++|+++|.++ .||++++++++..+.
T Consensus 425 ~~av~~~m~~~~~~r~~a~~~~~~~~~ 451 (475)
T PLN02167 425 AGAVRSLMDGEDVPRKKVKEIAEAARK 451 (475)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999765 799999999887654
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=234.23 Aligned_cols=179 Identities=23% Similarity=0.378 Sum_probs=147.2
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-----CCCC---------CCCEEE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-----MSGK---------IDKILL 68 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-----~~~~---------~~nv~~ 68 (244)
+++.+||++.+ +++|||||||... ++.+.+++++.+|+..+.+|+|+++... .... +.++++
T Consensus 271 ~~~~~WLd~~~~~svVyvsfGS~~~---~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v 347 (477)
T PLN02863 271 DDVMTWLDTCEDHKVVYVCFGSQVV---LTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVI 347 (477)
T ss_pred HHHHHHHhcCCCCceEEEEeeceec---CCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEe
Confidence 57899999875 6899999999965 6788899999999999999999997421 1122 346888
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCC---CCCCHHHHHHHH
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPY---DQITEETVLVAL 144 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai 144 (244)
.+|+||.++|.|+.+++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.+.. ...+.+++.+++
T Consensus 348 ~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v 427 (477)
T PLN02863 348 RGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVF 427 (477)
T ss_pred cCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999765 699999843 235789999999
Q ss_pred HHHh-CChhHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHc
Q psy16503 145 RTVL-GNPSYKKRAEKVARLFQDR---PMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 145 ~~ll-~~~~y~~~a~~~s~~~~~~---~~~~~~~a~~~ie~~~~~ 185 (244)
++++ .+++||++|++++++.++- ..+........++.+.+.
T Consensus 428 ~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 428 MESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 9998 6789999999999874431 123344445556665544
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=235.07 Aligned_cols=159 Identities=23% Similarity=0.478 Sum_probs=137.6
Q ss_pred HHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----C---CCC--CCCEEEeccCCh
Q psy16503 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----M---SGK--IDKILLKSWAPQ 74 (244)
Q Consensus 5 ~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~---~~~--~~nv~~~~~~pq 74 (244)
+..+|+|+.+ +++|||||||... .+.+.+++++.+|+..+.+|+|.++... . .+. +++..+.+|+||
T Consensus 258 ~~~~wld~~~~~svvyvsfGS~~~---~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ 334 (456)
T PLN02210 258 CCMEWLDKQARSSVVYISFGSMLE---SLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQ 334 (456)
T ss_pred HHHHHHhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhccCCCeEEEecCCH
Confidence 4679999865 6899999999865 6789999999999999999999986421 1 111 355578899999
Q ss_pred hhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCC----CCCHHHHHHHHHHHhC
Q psy16503 75 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYD----QITEETVLVALRTVLG 149 (244)
Q Consensus 75 ~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~----~~~~~~l~~ai~~ll~ 149 (244)
.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++++ .|+|+.+..+ .++.++|.++|+++|.
T Consensus 335 ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~ 414 (456)
T PLN02210 335 EKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTE 414 (456)
T ss_pred HHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999998 7999998642 5899999999999998
Q ss_pred Chh---HHHHHHHHHHHHhC
Q psy16503 150 NPS---YKKRAEKVARLFQD 166 (244)
Q Consensus 150 ~~~---y~~~a~~~s~~~~~ 166 (244)
+++ +|++++++++..+.
T Consensus 415 ~~~g~~~r~~a~~l~~~a~~ 434 (456)
T PLN02210 415 GPAAADIRRRAAELKHVARL 434 (456)
T ss_pred CchHHHHHHHHHHHHHHHHH
Confidence 764 99999988876654
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=233.00 Aligned_cols=160 Identities=23% Similarity=0.471 Sum_probs=134.9
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC-----------C-CCCCC-----
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-----------S-GKIDK----- 65 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~-----------~-~~~~n----- 65 (244)
+++.+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|+++.... . ..|+|
T Consensus 260 ~~~~~wLd~~~~~svvyvsfGS~~~---~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 336 (480)
T PLN00164 260 HECVRWLDAQPPASVVFLCFGSMGF---FDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERT 336 (480)
T ss_pred HHHHHHHHhCCCCceEEEEeccccc---CCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHh
Confidence 56899999975 6899999999844 78888999999999999999999874210 0 13333
Q ss_pred ----EEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCCC-----CC
Q psy16503 66 ----ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYD-----QI 135 (244)
Q Consensus 66 ----v~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~~-----~~ 135 (244)
+.+.+|+||.++|.|+.+.+||||||+||+.||+++|||+|++|+++||+.||++++ +.|+|+.+..+ .+
T Consensus 337 ~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~ 416 (480)
T PLN00164 337 KGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFV 416 (480)
T ss_pred cCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcC
Confidence 777899999999999999999999999999999999999999999999999999885 47999998532 36
Q ss_pred CHHHHHHHHHHHhCChh-----HHHHHHHHHHHHhC
Q psy16503 136 TEETVLVALRTVLGNPS-----YKKRAEKVARLFQD 166 (244)
Q Consensus 136 ~~~~l~~ai~~ll~~~~-----y~~~a~~~s~~~~~ 166 (244)
+.++|.++|+++|.+++ +|+++++++++.++
T Consensus 417 ~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~ 452 (480)
T PLN00164 417 EAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRK 452 (480)
T ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Confidence 89999999999997654 57777777766654
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-30 Score=230.38 Aligned_cols=178 Identities=22% Similarity=0.292 Sum_probs=148.4
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--------CCCC------CCCCEEE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--------NMSG------KIDKILL 68 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--------~~~~------~~~nv~~ 68 (244)
++..+|||+.+ +++|||||||... ++.+.+.++..+|+..+..|+|.+... .+++ ....+.+
T Consensus 245 ~~cl~WLD~q~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~ 321 (453)
T PLN02764 245 ERWVKWLSGYEPDSVVFCALGSQVI---LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVW 321 (453)
T ss_pred hHHHHHHhCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEE
Confidence 46889999874 8899999999965 788999999999998899999998731 1211 1345677
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCC---CCCHHHHHHHH
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYD---QITEETVLVAL 144 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~---~~~~~~l~~ai 144 (244)
.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|++.||+.||+++++ .|+|+.+..+ .++.++|++++
T Consensus 322 ~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av 401 (453)
T PLN02764 322 GGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAI 401 (453)
T ss_pred eCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999964 7999887543 58999999999
Q ss_pred HHHhCCh-----hHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 145 RTVLGNP-----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 145 ~~ll~~~-----~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+++|.++ ++|++++++++.+++. .+.-......++++.+.
T Consensus 402 ~~vm~~~~~~g~~~r~~a~~~~~~~~~~-GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 402 NSVMKRDSEIGNLVKKNHTKWRETLASP-GLLTGYVDNFIESLQDL 446 (453)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHh
Confidence 9999774 2899999999999764 33444555667777665
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=233.01 Aligned_cols=160 Identities=24% Similarity=0.442 Sum_probs=138.4
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCC-CCCCEEEeccCChhhhhC
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSG-KIDKILLKSWAPQRDILD 79 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~-~~~nv~~~~~~pq~~lL~ 79 (244)
.++.+|+++.+ +++|||||||... ++.+.+++++++|+..+.+|+|++... .+.+ .+.|.++.+|+||.++|.
T Consensus 262 ~~~~~wl~~~~~~~vvyvsfGs~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~ 338 (459)
T PLN02448 262 PDYFQWLDSQPEGSVLYVSLGSFLS---VSSAQMDEIAAGLRDSGVRFLWVARGEASRLKEICGDMGLVVPWCDQLKVLC 338 (459)
T ss_pred hHHHHHHcCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhHhccCCEEEeccCCHHHHhc
Confidence 37889999875 6899999999864 678899999999999999999987643 2222 235889999999999999
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCC-----CCCCHHHHHHHHHHHhCCh--
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPY-----DQITEETVLVALRTVLGNP-- 151 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~-----~~~~~~~l~~ai~~ll~~~-- 151 (244)
|+.+.+||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.+.. ..++.++|.++++++|.++
T Consensus 339 h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~ 418 (459)
T PLN02448 339 HSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESE 418 (459)
T ss_pred cCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCch
Confidence 999999999999999999999999999999999999999999984 88887742 2468999999999999764
Q ss_pred ---hHHHHHHHHHHHHhC
Q psy16503 152 ---SYKKRAEKVARLFQD 166 (244)
Q Consensus 152 ---~y~~~a~~~s~~~~~ 166 (244)
++|+++++++++.+.
T Consensus 419 ~~~~~r~~a~~~~~~~~~ 436 (459)
T PLN02448 419 EGKEMRRRAKELQEICRG 436 (459)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 689999998887764
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=231.79 Aligned_cols=160 Identities=26% Similarity=0.456 Sum_probs=137.5
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC------------CCC-CCCCC----
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE------------NMS-GKIDK---- 65 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~------------~~~-~~~~n---- 65 (244)
+++.+|||+.+ +++|||||||... ++.+.+++++.+|+..+++|+|++... ... ..|+|
T Consensus 255 ~~~~~WLd~~~~~sVvyvsFGS~~~---~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er 331 (470)
T PLN03015 255 NSIFEWLDKQGERSVVYVCLGSGGT---LTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDR 331 (470)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCCc---CCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHh
Confidence 46999999974 7999999999954 899999999999999999999999621 111 24555
Q ss_pred -----EEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeecC----CCCC
Q psy16503 66 -----ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTLP----YDQI 135 (244)
Q Consensus 66 -----v~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l~----~~~~ 135 (244)
+.+.+|+||.++|.|+.+.+||||||+||+.||+++||||+++|+++||+.||+++ +..|+|+.+. ...+
T Consensus 332 ~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v 411 (470)
T PLN03015 332 TRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI 411 (470)
T ss_pred hccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence 77889999999999999999999999999999999999999999999999999999 5679999985 2357
Q ss_pred CHHHHHHHHHHHhC-----ChhHHHHHHHHHHHHhC
Q psy16503 136 TEETVLVALRTVLG-----NPSYKKRAEKVARLFQD 166 (244)
Q Consensus 136 ~~~~l~~ai~~ll~-----~~~y~~~a~~~s~~~~~ 166 (244)
+.+++.++|+++|. ....|++|++++++.+.
T Consensus 412 ~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~ 447 (470)
T PLN03015 412 GREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSER 447 (470)
T ss_pred CHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHH
Confidence 89999999999994 24678888888776654
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=226.78 Aligned_cols=156 Identities=24% Similarity=0.457 Sum_probs=132.1
Q ss_pred HHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---CCCC------CCCCEEEeccCCh
Q psy16503 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---NMSG------KIDKILLKSWAPQ 74 (244)
Q Consensus 5 ~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---~~~~------~~~nv~~~~~~pq 74 (244)
+..+||++.+ +++|||||||... ++.+.+.+++.+|. +..|+|++... .+++ .++|+++.+|+||
T Consensus 253 ~c~~WLd~~~~~svvyvsfGS~~~---~~~~~~~ela~gLs--~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ 327 (449)
T PLN02173 253 LCTDWLDKRPQGSVVYIAFGSMAK---LSSEQMEEIASAIS--NFSYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQ 327 (449)
T ss_pred HHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHhc--CCCEEEEEeccchhcccchHHHhhcCCceEEeCCCCH
Confidence 4789999876 6799999999864 78899999999994 45699998631 1221 1578999999999
Q ss_pred hhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCC----CCCHHHHHHHHHHHhC
Q psy16503 75 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYD----QITEETVLVALRTVLG 149 (244)
Q Consensus 75 ~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~----~~~~~~l~~ai~~ll~ 149 (244)
.++|.|+.+.+||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.+..+ .++.+++.++++++|.
T Consensus 328 ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~ 407 (449)
T PLN02173 328 LQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVME 407 (449)
T ss_pred HHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999986 888887543 2589999999999997
Q ss_pred Ch---hHHHHHHHHHHHHh
Q psy16503 150 NP---SYKKRAEKVARLFQ 165 (244)
Q Consensus 150 ~~---~y~~~a~~~s~~~~ 165 (244)
++ .+|+++++++++.+
T Consensus 408 ~~~~~~~r~~a~~~~~~a~ 426 (449)
T PLN02173 408 GEKSKEMKENAGKWRDLAV 426 (449)
T ss_pred CChHHHHHHHHHHHHHHHH
Confidence 74 45777777766655
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=227.32 Aligned_cols=179 Identities=20% Similarity=0.287 Sum_probs=146.0
Q ss_pred hHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----C-CCCCC---------CCEEE
Q psy16503 4 TDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----N-MSGKI---------DKILL 68 (244)
Q Consensus 4 ~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~-~~~~~---------~nv~~ 68 (244)
++..+|||+.+ +.+|||||||... ++.+.+.++...|+..+..|+|.+... . ....| ....+
T Consensus 240 ~~~~~WLD~q~~~sVvyvsfGS~~~---~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv 316 (446)
T PLN00414 240 DRWNHWLNGFEPGSVVFCAFGTQFF---FEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVW 316 (446)
T ss_pred HHHHHHHhcCCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEE
Confidence 35789999875 7899999999965 778889999999999999999998641 1 01123 34566
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCCC---CCCHHHHHHHH
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYD---QITEETVLVAL 144 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~~---~~~~~~l~~ai 144 (244)
.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|++.||+.||++++ +.|+|+.+..+ .++.+++.+++
T Consensus 317 ~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v 396 (446)
T PLN00414 317 EGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTV 396 (446)
T ss_pred eccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999996 57999999643 38999999999
Q ss_pred HHHhCChh-----HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcC
Q psy16503 145 RTVLGNPS-----YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHG 186 (244)
Q Consensus 145 ~~ll~~~~-----y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~~~ 186 (244)
+++|.+++ +|++++++++.+.+...+ .......++.+.+..
T Consensus 397 ~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~-ss~l~~~v~~~~~~~ 442 (446)
T PLN00414 397 KSVMDKDSEIGNLVKRNHKKLKETLVSPGLL-SGYADKFVEALENEV 442 (446)
T ss_pred HHHhcCChhhHHHHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHhc
Confidence 99997643 899999999888663221 333455666665443
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=223.07 Aligned_cols=167 Identities=31% Similarity=0.523 Sum_probs=153.9
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CCCCCCCEEEeccCChhhhhCCCCeeEEEecC
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKSWAPQRDILDHPNVKVFISHG 90 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ithg 90 (244)
.++++||+|+||.... .++++.+++++..++.+||...++.+ ..+.|.|+.+.+|+||..++ +++++|||||
T Consensus 235 ~d~~~vyvslGt~~~~----~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l--~~ad~vI~hG 308 (406)
T COG1819 235 ADRPIVYVSLGTVGNA----VELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELL--PRADAVIHHG 308 (406)
T ss_pred CCCCeEEEEcCCcccH----HHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCCHHHHh--hhcCEEEecC
Confidence 4579999999999642 78999999999999999999887622 45789999999999999999 8999999999
Q ss_pred ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCC
Q psy16503 91 GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMP 170 (244)
Q Consensus 91 G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~ 170 (244)
|+||++||+++|||++++|...||+.||.++++.|.|+.+..+.++.+.|.++|+++|+|+.|+++++++++.++. ..
T Consensus 309 G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~--~~ 386 (406)
T COG1819 309 GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFKE--ED 386 (406)
T ss_pred CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhh--cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987 66
Q ss_pred hHHHHHHHHHHHHHcCC
Q psy16503 171 PLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 171 ~~~~a~~~ie~~~~~~~ 187 (244)
+.+.+++++|...+.++
T Consensus 387 g~~~~a~~le~~~~~~~ 403 (406)
T COG1819 387 GPAKAADLLEEFAREKK 403 (406)
T ss_pred cHHHHHHHHHHHHhccc
Confidence 78889999999887643
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=216.26 Aligned_cols=176 Identities=25% Similarity=0.432 Sum_probs=142.3
Q ss_pred HHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-------C--CC-----C-CCCCEEE
Q psy16503 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-------N--MS-----G-KIDKILL 68 (244)
Q Consensus 5 ~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-------~--~~-----~-~~~nv~~ 68 (244)
+..+|||+.+ +++|||||||... ++.+.+.+++.+|+..+++|+|+++.. . ++ . .+.++++
T Consensus 272 ~cl~wLd~~~~~sVvyvsfGS~~~---~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v 348 (491)
T PLN02534 272 QCLEWLDSMKPRSVIYACLGSLCR---LVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLI 348 (491)
T ss_pred HHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeec
Confidence 5779999986 6999999999964 778889999999999999999999831 0 11 1 3568888
Q ss_pred eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCC---------C----C
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPY---------D----Q 134 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~---------~----~ 134 (244)
.+|+||.++|.|+.+.+||||||+||++||+++|||+|++|++.||+.||+++++. |+|+.+.. + .
T Consensus 349 ~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~ 428 (491)
T PLN02534 349 KGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVL 428 (491)
T ss_pred cCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999744 88887631 1 2
Q ss_pred CCHHHHHHHHHHHhC-----ChhHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLG-----NPSYKKRAEKVARLFQDR---PMPPLDTAIYWIEHVI 183 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~-----~~~y~~~a~~~s~~~~~~---~~~~~~~a~~~ie~~~ 183 (244)
++.+++.++|+++|. ..++|++|++++++.+.- ..++.......|+.+.
T Consensus 429 v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~ 485 (491)
T PLN02534 429 VKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVL 485 (491)
T ss_pred cCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 689999999999995 257899999988766542 1233333444455444
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=209.82 Aligned_cols=171 Identities=26% Similarity=0.375 Sum_probs=147.3
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC--CCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~--~~~~~nv~~~~~~pq~~lL~h 80 (244)
++++..|++.. +++|||++||... ..+....+.+++++...+.+++|..+.... ...++|+++.+|+|+.++|
T Consensus 228 ~~~~~~~~~~~-~~~v~v~~Gs~~~--~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p~~~ll-- 302 (401)
T cd03784 228 PPELWLFLAAG-RPPVYVGFGSMVV--RDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVPHDWLL-- 302 (401)
T ss_pred CHHHHHHHhCC-CCcEEEeCCCCcc--cCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCCHHHHh--
Confidence 35678888764 5899999999853 245678889999999888899999886432 2467899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+.|++||||||+||++||+++|||+|++|...||+.||+++++.|+|+.++..+++.++|.+++++++++ .+++++.+.
T Consensus 303 ~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~-~~~~~~~~~ 381 (401)
T cd03784 303 PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP-PSRRRAAAL 381 (401)
T ss_pred hhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH-HHHHHHHHH
Confidence 7799999999999999999999999999999999999999999999999998888999999999999975 466667777
Q ss_pred HHHHhCCCCChHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~ 181 (244)
.+.++. .++.+.+++.||.
T Consensus 382 ~~~~~~--~~g~~~~~~~ie~ 400 (401)
T cd03784 382 LRRIRE--EDGVPSAADVIER 400 (401)
T ss_pred HHHHHh--ccCHHHHHHHHhh
Confidence 777765 6788999888874
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-27 Score=209.40 Aligned_cols=170 Identities=25% Similarity=0.445 Sum_probs=149.3
Q ss_pred HHHhc-CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCC
Q psy16503 8 KFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 8 ~~l~~-~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
.|.+. .++++||||+||... ...+.++.+++++.+.+.+++|..+.. .+...++|+.+.+|+|+.++| +.
T Consensus 217 ~~~~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~~ll--~~ 291 (392)
T TIGR01426 217 SWERPGDGRPVVLISLGTVFN---NQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQLEIL--KK 291 (392)
T ss_pred CCCCCCCCCCEEEEecCccCC---CCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCHHHHH--hh
Confidence 35544 347899999999743 234588899999999998999887653 233467899999999999999 67
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
++++|||||.||+.||+++|+|+|++|...||..||+++++.|+|+.+...+++.++|.++|+++++|++|+++++++++
T Consensus 292 ~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~ 371 (392)
T TIGR01426 292 ADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRA 371 (392)
T ss_pred CCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
.+.. .++.+.++++++.+++
T Consensus 372 ~~~~--~~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 372 EIRE--AGGARRAADEIEGFLA 391 (392)
T ss_pred HHHH--cCCHHHHHHHHHHhhc
Confidence 9987 6688999999998764
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-16 Score=140.87 Aligned_cols=154 Identities=21% Similarity=0.264 Sum_probs=113.2
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC--CCeEEEEecCCCCCC---CCCCEEEeccC-Chh-hhhCCCCeeEE
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI--PQRVIWKWEGENMSG---KIDKILLKSWA-PQR-DILDHPNVKVF 86 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~--~~~viw~~~~~~~~~---~~~nv~~~~~~-pq~-~lL~h~~~~l~ 86 (244)
++++|+|..||... ..+-+.+.+++..+ +.+++|.+|.+.... ...++...+|+ +.+ +++ ..+|++
T Consensus 184 ~~~~iLv~GGS~Ga-----~~in~~~~~~l~~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~--~~adlv 256 (352)
T PRK12446 184 KKPVITIMGGSLGA-----KKINETVREALPELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDIL--AITDFV 256 (352)
T ss_pred CCcEEEEECCccch-----HHHHHHHHHHHHhhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHH--HhCCEE
Confidence 36799999999853 22223333333332 368999998643221 11355667887 434 667 789999
Q ss_pred EecCChhhHHHHHHhCCcEEecCCC-----cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh-hHHHHHHHH
Q psy16503 87 ISHGGFLGTTEALYSGVPIIGIPMF-----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP-SYKKRAEKV 160 (244)
Q Consensus 87 IthgG~~s~~Eal~~gvP~i~vP~~-----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~-~y~~~a~~~ 160 (244)
|||||.+|+.|++++|+|+|++|+. +||..||+.+++.|+|..+..++++.+.|.+++.++++|+ .|++++++
T Consensus 257 Isr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~- 335 (352)
T PRK12446 257 ISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKK- 335 (352)
T ss_pred EECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHH-
Confidence 9999999999999999999999985 4899999999999999999989999999999999999886 44443333
Q ss_pred HHHHhCCCCChHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie 180 (244)
+.. .++.+..+++++
T Consensus 336 ---~~~--~~aa~~i~~~i~ 350 (352)
T PRK12446 336 ---YNG--KEAIQTIIDHIS 350 (352)
T ss_pred ---cCC--CCHHHHHHHHHH
Confidence 332 355666666554
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-16 Score=139.09 Aligned_cols=162 Identities=20% Similarity=0.214 Sum_probs=126.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCCCCC-----CCCC-EEEeccCChhhhhCCCCeeE
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMSG-----KIDK-ILLKSWAPQRDILDHPNVKV 85 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~~~~-----~~~n-v~~~~~~pq~~lL~h~~~~l 85 (244)
++++|+|..||... ..+.+.+.+++..+. ..+++.++.+.+.. ...+ +.+.+|.+++..+. ..+|+
T Consensus 182 ~~~~ilV~GGS~Ga-----~~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~-~~ADL 255 (357)
T COG0707 182 DKKTILVTGGSQGA-----KALNDLVPEALAKLANRIQVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALL-AAADL 255 (357)
T ss_pred CCcEEEEECCcchh-----HHHHHHHHHHHHHhhhCeEEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHH-HhccE
Confidence 46899999999954 333444444444444 58899888753211 1112 88899987775443 89999
Q ss_pred EEecCChhhHHHHHHhCCcEEecCCC----cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 86 FISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 86 ~IthgG~~s~~Eal~~gvP~i~vP~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
+||++|.+|+.|++++|+|+|.+|.. +||..||..++++|+|.+++..++|.+++.+.|.++++++.-.++|.+.+
T Consensus 256 vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a 335 (357)
T COG0707 256 VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENA 335 (357)
T ss_pred EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999999999973 48999999999999999999999999999999999999988788888888
Q ss_pred HHHhCCCCChHHHHHHHHHHHH
Q psy16503 162 RLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 162 ~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
+.+.. .++.++.++.++...
T Consensus 336 ~~~~~--p~aa~~i~~~~~~~~ 355 (357)
T COG0707 336 KKLGK--PDAAERIADLLLALA 355 (357)
T ss_pred HhcCC--CCHHHHHHHHHHHHh
Confidence 87765 455666666665543
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-19 Score=139.77 Aligned_cols=136 Identities=24% Similarity=0.306 Sum_probs=99.3
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHH---HHHHhcC--CCeEEEEecCCC-------CCCCCCCEEEeccCC-hhhhhCCCCe
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAF---LRAFEQI--PQRVIWKWEGEN-------MSGKIDKILLKSWAP-QRDILDHPNV 83 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i---~~al~~~--~~~viw~~~~~~-------~~~~~~nv~~~~~~p-q~~lL~h~~~ 83 (244)
+|+|+.||... ..+.+.+ .+.+... +.+|++.+|... ..+.+.|+.+.+|.+ ..+++ ..+
T Consensus 1 tilv~gGs~g~-----~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m--~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGA-----RDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELM--AAA 73 (167)
T ss_dssp -EEEEETTTSH-----HHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHH--HHH
T ss_pred CEEEEECCCCH-----HHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHH--HHc
Confidence 58999998843 1222222 2222221 357899888632 122337899999999 55666 889
Q ss_pred eEEEecCChhhHHHHHHhCCcEEecCCCc----chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGIPMFG----DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~vP~~~----dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
|++|||||.+|++|++++|+|+|++|... +|..||..+++.|+|+.+...+.+.++|.++|.+++.++.++..+.+
T Consensus 74 DlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~~~~~~ 153 (167)
T PF04101_consen 74 DLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEKLKEMAK 153 (167)
T ss_dssp SEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-SHHHCC
T ss_pred CEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHHHHHHHH
Confidence 99999999999999999999999999987 99999999999999999998888889999999999998776444433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-16 Score=136.75 Aligned_cols=122 Identities=22% Similarity=0.357 Sum_probs=102.8
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCCCCCCCCCEEEeccC--ChhhhhCCCCeeEEEecC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGENMSGKIDKILLKSWA--PQRDILDHPNVKVFISHG 90 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~~~~~~~nv~~~~~~--pq~~lL~h~~~~l~Ithg 90 (244)
+++.|+|++|+... . .+.++++..+ .++++. +.......++|+.+.++. +..++| +.+|++||||
T Consensus 191 ~~~~iLv~~gg~~~-----~----~~~~~l~~~~~~~~~v~-g~~~~~~~~~ni~~~~~~~~~~~~~m--~~ad~vIs~~ 258 (318)
T PF13528_consen 191 DEPKILVYFGGGGP-----G----DLIEALKALPDYQFIVF-GPNAADPRPGNIHVRPFSTPDFAELM--AAADLVISKG 258 (318)
T ss_pred CCCEEEEEeCCCcH-----H----HHHHHHHhCCCCeEEEE-cCCcccccCCCEEEeecChHHHHHHH--HhCCEEEECC
Confidence 36789999999943 2 5677777777 466665 543333458899999986 455788 8899999999
Q ss_pred ChhhHHHHHHhCCcEEecCC--CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHH
Q psy16503 91 GFLGTTEALYSGVPIIGIPM--FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 91 G~~s~~Eal~~gvP~i~vP~--~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~l 147 (244)
|++|++|++++|+|++++|. +.||..||+.+++.|+|+.++.++++++.|.++|+++
T Consensus 259 G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 259 GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 99999999999999999999 7899999999999999999999999999999999875
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.1e-16 Score=135.76 Aligned_cols=126 Identities=25% Similarity=0.404 Sum_probs=98.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCCCCCCCCCEEEeccCC--hhhhhCCCCeeEEEecCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGENMSGKIDKILLKSWAP--QRDILDHPNVKVFISHGG 91 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~~~~~~~nv~~~~~~p--q~~lL~h~~~~l~IthgG 91 (244)
++.|+|.+|+.. .+.+++++.+.++ .+++...+......++|+.+.+|.| ..+.| +.|+++|||||
T Consensus 188 ~~~iLv~~g~~~---------~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~~l--~~ad~vI~~~G 256 (321)
T TIGR00661 188 EDYILVYIGFEY---------RYKILELLGKIANVKFVCYSYEVAKNSYNENVEIRRITTDNFKELI--KNAELVITHGG 256 (321)
T ss_pred CCcEEEECCcCC---------HHHHHHHHHhCCCeEEEEeCCCCCccccCCCEEEEECChHHHHHHH--HhCCEEEECCC
Confidence 477889988762 2445777877765 5552211111234568999999987 34566 89999999999
Q ss_pred hhhHHHHHHhCCcEEecCCCc--chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 92 FLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 92 ~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
.+|++||+++|+|++++|..+ ||..||+.+++.|+|+.++..++ ++.+++.++++|+.|.
T Consensus 257 ~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 257 FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH---HHHHHHHhcccccccc
Confidence 999999999999999999954 89999999999999999987765 6777888888887764
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=126.03 Aligned_cols=160 Identities=19% Similarity=0.227 Sum_probs=121.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC--eEEEEecCCC-------CCCCCCCEEEeccCC-hhhhhCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ--RVIWKWEGEN-------MSGKIDKILLKSWAP-QRDILDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~--~viw~~~~~~-------~~~~~~nv~~~~~~p-q~~lL~h~~~~ 84 (244)
.++|++..|+.. .......+.+++.++.. .++|.+|+.. .. .+-++.+.+|.+ ..+++ +.+|
T Consensus 183 ~~~i~~~gg~~~-----~~~~~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~~-~~~~v~~~g~~~~~~~~~--~~~d 254 (357)
T PRK00726 183 KPTLLVVGGSQG-----ARVLNEAVPEALALLPEALQVIHQTGKGDLEEVRAAYA-AGINAEVVPFIDDMAAAY--AAAD 254 (357)
T ss_pred CeEEEEECCcHh-----HHHHHHHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHhh-cCCcEEEeehHhhHHHHH--HhCC
Confidence 456666555542 12223333366655543 5567777521 11 222488899984 45777 8999
Q ss_pred EEEecCChhhHHHHHHhCCcEEecCC----CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 85 VFISHGGFLGTTEALYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 85 l~IthgG~~s~~Eal~~gvP~i~vP~----~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
++|+|+|.++++||+++|+|+|++|. .+||..|+..+.+.|.|..+..++++++.|.++|+++++|+++++++.+.
T Consensus 255 ~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 334 (357)
T PRK00726 255 LVICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEA 334 (357)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999997 46899999999999999999888888999999999999999999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
++.+.+ ..+.++++..++.++|
T Consensus 335 ~~~~~~--~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 335 ARALGK--PDAAERLADLIEELAR 356 (357)
T ss_pred HHhcCC--cCHHHHHHHHHHHHhh
Confidence 888865 4667777777766654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-12 Score=112.00 Aligned_cols=153 Identities=22% Similarity=0.225 Sum_probs=110.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCCC-------CCCCCCEEEeccC-ChhhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGENM-------SGKIDKILLKSWA-PQRDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~~-------~~~~~nv~~~~~~-pq~~lL~h~~~ 83 (244)
+.+|++..|+.. .....+.+.+++..+ +..+++.+|.... ....+|+.+.+|. +..++| +.+
T Consensus 181 ~~~i~~~~g~~~-----~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l--~~a 253 (350)
T cd03785 181 KPTLLVFGGSQG-----ARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAY--AAA 253 (350)
T ss_pred CeEEEEECCcHh-----HHHHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHH--Hhc
Confidence 345555555552 122222233444433 2355666665311 1124689999998 445677 789
Q ss_pred eEEEecCChhhHHHHHHhCCcEEecCC----CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~vP~----~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
|++|+++|.+++.||+++|+|++++|. .++|..|+..+.+.|.|..++.++.+.+++.++|+++++|+..++.+.+
T Consensus 254 d~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 333 (350)
T cd03785 254 DLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAE 333 (350)
T ss_pred CEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999999999999999999985 4689999999999999999987767899999999999999888888888
Q ss_pred HHHHHhCCCCChHHHHH
Q psy16503 160 VARLFQDRPMPPLDTAI 176 (244)
Q Consensus 160 ~s~~~~~~~~~~~~~a~ 176 (244)
.+..... ..+.++++
T Consensus 334 ~~~~~~~--~~~~~~i~ 348 (350)
T cd03785 334 AARSLAR--PDAAERIA 348 (350)
T ss_pred HHHhcCC--CCHHHHHH
Confidence 7776654 34455544
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.1e-11 Score=109.53 Aligned_cols=157 Identities=15% Similarity=0.185 Sum_probs=114.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHH-hcCC-CeEEEEecCCC-----C---CCCCCCEEEeccCChh-hhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAF-EQIP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQR-DILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al-~~~~-~~viw~~~~~~-----~---~~~~~nv~~~~~~pq~-~lL~h~~~ 83 (244)
+++|++..|+... ...+..+++++ +..+ .++++.+|++. + ....+++.+.+|.++. +++ ..+
T Consensus 202 ~~~ilv~~G~lg~-----~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~--~~a 274 (391)
T PRK13608 202 KQTILMSAGAFGV-----SKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWM--ASS 274 (391)
T ss_pred CCEEEEECCCccc-----chhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHH--Hhh
Confidence 5678888888742 12344445553 3333 46766666431 1 1234589999998765 466 789
Q ss_pred eEEEecCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
|++|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+.|+|+..+ +.+++.++|.++++|++.++++.+.+.
T Consensus 275 Dl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~ 350 (391)
T PRK13608 275 QLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQLTNMISTME 350 (391)
T ss_pred hEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999998888999999999999998 77777889999999999998864 688999999999999988888888887
Q ss_pred HHhCCCCChHHHHHHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
.... +.+ .+..++.++.++.
T Consensus 351 ~~~~-~~s-~~~i~~~l~~l~~ 370 (391)
T PRK13608 351 QDKI-KYA-TQTICRDLLDLIG 370 (391)
T ss_pred HhcC-CCC-HHHHHHHHHHHhh
Confidence 7754 444 4444444444443
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.7e-11 Score=107.17 Aligned_cols=156 Identities=17% Similarity=0.219 Sum_probs=115.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC-----C----CCCCCCEEEeccCChh-hhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN-----M----SGKIDKILLKSWAPQR-DILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~-----~----~~~~~nv~~~~~~pq~-~lL~h~~~ 83 (244)
++++++..|+... .+.+..+++++.+.+ .++++..+++. + ...++|+.+.+|+++. +++ ..+
T Consensus 202 ~~~il~~~G~~~~-----~k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~--~~a 274 (380)
T PRK13609 202 KKILLIMAGAHGV-----LGNVKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELF--RVT 274 (380)
T ss_pred CcEEEEEcCCCCC-----CcCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHH--Hhc
Confidence 4677777777632 122455667776554 46777666321 1 1234689999999875 677 789
Q ss_pred eEEEecCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
|++|+.+|..++.||+++|+|+|+. |..++|..|+..+.+.|+|+... +.+++.++|.++++|++.++++.+.+.
T Consensus 275 D~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~ 350 (380)
T PRK13609 275 SCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMKEAMK 350 (380)
T ss_pred cEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 9999999988999999999999985 77778889999999999998753 579999999999999988888888777
Q ss_pred HHhCCCCChHHHHHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.+... .+.+..+..++..+
T Consensus 351 ~~~~~--~s~~~i~~~i~~~~ 369 (380)
T PRK13609 351 SLYLP--EPADHIVDDILAEN 369 (380)
T ss_pred HhCCC--chHHHHHHHHHHhh
Confidence 66542 35566655555443
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-10 Score=102.38 Aligned_cols=159 Identities=13% Similarity=0.115 Sum_probs=108.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHh-----cCCCeEEEEecCCC-----CCC--CCCCEEEeccCChhhhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFE-----QIPQRVIWKWEGEN-----MSG--KIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~-----~~~~~viw~~~~~~-----~~~--~~~nv~~~~~~pq~~lL~h~~ 82 (244)
+++|++..|+... ....+.++.+.+.+. ..+.++++.+|++. +.. ...++.+.+|.++..-+. ..
T Consensus 206 ~~~il~~Gg~~g~--~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~-~a 282 (382)
T PLN02605 206 LPAVLLMGGGEGM--GPLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM-GA 282 (382)
T ss_pred CcEEEEECCCccc--ccHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH-Hh
Confidence 4667766665532 111333333333221 11245677777531 111 234788999998664333 78
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcch-hhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC-hhHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQ-KANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN-PSYKKRAEKV 160 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ-~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~-~~y~~~a~~~ 160 (244)
+|++|+.+|.+|+.||+++|+|+|+.+....| ..|+..+.+.|.|+.+. +.+++.++|.+++.| ++.++++.+.
T Consensus 283 aDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~----~~~~la~~i~~ll~~~~~~~~~m~~~ 358 (382)
T PLN02605 283 CDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFSE----SPKEIARIVAEWFGDKSDELEAMSEN 358 (382)
T ss_pred CCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999999999999999765555 47999999999998762 689999999999988 8878888887
Q ss_pred HHHHhCCCCChHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~ 182 (244)
++.... | .+.+.++..+...
T Consensus 359 ~~~~~~-~-~a~~~i~~~l~~~ 378 (382)
T PLN02605 359 ALKLAR-P-EAVFDIVHDLHEL 378 (382)
T ss_pred HHHhcC-C-chHHHHHHHHHHH
Confidence 777754 3 3445555444433
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-11 Score=106.03 Aligned_cols=101 Identities=24% Similarity=0.276 Sum_probs=85.4
Q ss_pred ChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCC---cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 73 pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+..+++ +.+|++|+++|.+++.||+++|+|+|++|.. ++|..|+..+.+.|.|..++..+.+.++|.++++++++
T Consensus 243 ~~~~~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 243 NMAAAY--AAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred CHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc
Confidence 456778 7899999999988999999999999999863 57888999999999999998877789999999999999
Q ss_pred ChhHHHHHHHHHHHHhCCCCChHHHHHH
Q psy16503 150 NPSYKKRAEKVARLFQDRPMPPLDTAIY 177 (244)
Q Consensus 150 ~~~y~~~a~~~s~~~~~~~~~~~~~a~~ 177 (244)
|+++++++.+.++.+.. ....+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~--~~~~~~i~~ 346 (348)
T TIGR01133 321 DPANLEAMAEAARKLAK--PDAAKRIAE 346 (348)
T ss_pred CHHHHHHHHHHHHhcCC--ccHHHHHHh
Confidence 99999888888876654 344555443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.2e-10 Score=95.88 Aligned_cols=133 Identities=20% Similarity=0.188 Sum_probs=107.6
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC--e-EEEEecCCCCC-----------CCCCCEEEeccCChhhhhC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ--R-VIWKWEGENMS-----------GKIDKILLKSWAPQRDILD 79 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~--~-viw~~~~~~~~-----------~~~~nv~~~~~~pq~~lL~ 79 (244)
++..|+||.|+.. ...+++...+.|-..++. + .+...|. .++ ..-+++.+..|..+..-|.
T Consensus 218 E~~~Ilvs~GGG~----dG~eLi~~~l~A~~~l~~l~~~~~ivtGP-~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll 292 (400)
T COG4671 218 EGFDILVSVGGGA----DGAELIETALAAAQLLAGLNHKWLIVTGP-FMPEAQRQKLLASAPKRPHISIFEFRNDFESLL 292 (400)
T ss_pred ccceEEEecCCCh----hhHHHHHHHHHHhhhCCCCCcceEEEeCC-CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHH
Confidence 4568999998884 468889988888776543 2 3444443 222 1237899999987664333
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEecCCC---cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
..++++|+-||+||++|-+.+|+|.+++|.. .||-.-|.++++.|+.-++.++++++..+.++|...+.-|+
T Consensus 293 -~gA~~vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~ 367 (400)
T COG4671 293 -AGARLVVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPS 367 (400)
T ss_pred -HhhheeeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCC
Confidence 7999999999999999999999999999984 49999999999999999999999999999999999996443
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-10 Score=98.86 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=75.6
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCC-C-------CCCCCCEEEeccCChh-hhhCCCCee
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGEN-M-------SGKIDKILLKSWAPQR-DILDHPNVK 84 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~-~-------~~~~~nv~~~~~~pq~-~lL~h~~~~ 84 (244)
+.|++++|+.. +......+++++.+.+ .++.+.+|... . ....+|+.+..+.+++ ++| +.+|
T Consensus 171 ~~iLi~~GG~d-----~~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm--~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGAD-----PDNLTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELM--NEAD 243 (279)
T ss_pred CeEEEEeCCcC-----CcCHHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHH--HHCC
Confidence 57999999883 3334556667776553 46777777521 1 1235689999999887 566 8999
Q ss_pred EEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHH
Q psy16503 85 VFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV 120 (244)
Q Consensus 85 l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~ 120 (244)
++||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 244 l~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 244 LAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999999 8999999999999999999999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.6e-09 Score=93.15 Aligned_cols=156 Identities=20% Similarity=0.141 Sum_probs=105.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCeEEEEe-cCCCC-------C--CC--------------CCCE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKW-EGENM-------S--GK--------------IDKI 66 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~~viw~~-~~~~~-------~--~~--------------~~nv 66 (244)
.++|++-.||... +. ...+..+++++..+ +..|++.+ ++... . +. .+++
T Consensus 205 ~~~lllLpGSR~a-e~--~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 281 (396)
T TIGR03492 205 RFRIALLPGSRPP-EA--YRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTL 281 (396)
T ss_pred CCEEEEECCCCHH-HH--HccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCce
Confidence 4577777787733 11 12234556665554 34788877 33211 1 11 1235
Q ss_pred EEeccCC-hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc----CceeecCCCCCCHHHHH
Q psy16503 67 LLKSWAP-QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA----GFGVTLPYDQITEETVL 141 (244)
Q Consensus 67 ~~~~~~p-q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~----G~g~~l~~~~~~~~~l~ 141 (244)
.+..+.. ..+++ ..+|++|+.+|..| .|+++.|+|+|.+|.-.+|. |+..+++. |.++.+... +.+.+.
T Consensus 282 ~v~~~~~~~~~~l--~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~~--~~~~l~ 355 (396)
T TIGR03492 282 EVLLGRGAFAEIL--HWADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLASK--NPEQAA 355 (396)
T ss_pred EEEechHhHHHHH--HhCCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCCC--CHHHHH
Confidence 5555544 34677 78999999999877 99999999999999878887 99888775 777777543 459999
Q ss_pred HHHHHHhCChhHHHHHH-HHHHHHhCCCCChHHHHHHHHHH
Q psy16503 142 VALRTVLGNPSYKKRAE-KVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 142 ~ai~~ll~~~~y~~~a~-~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
+++.++++|++.++++. +..+.+.+ .++.++++..+..
T Consensus 356 ~~l~~ll~d~~~~~~~~~~~~~~lg~--~~a~~~ia~~i~~ 394 (396)
T TIGR03492 356 QVVRQLLADPELLERCRRNGQERMGP--PGASARIAESILK 394 (396)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHH
Confidence 99999999988877776 44444543 3567777766553
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >KOG3349|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.8e-09 Score=82.27 Aligned_cols=117 Identities=15% Similarity=0.186 Sum_probs=87.5
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC-CCCC-------CC--CEEEeccCCh-hhhhCCCCe
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN-MSGK-------ID--KILLKSWAPQ-RDILDHPNV 83 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~-~~~~-------~~--nv~~~~~~pq-~~lL~h~~~ 83 (244)
..+||+-||.........-..++.++.+.+.+. +.+.++|+.. ..+. .. .+..++|-|. .+.+ ..+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I--~~A 81 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI--RSA 81 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHH--hhc
Confidence 579999999975333334444556777777776 8899998742 1111 11 3556677786 3444 569
Q ss_pred eEEEecCChhhHHHHHHhCCcEEecCC----CcchhhHHHHHHHcCceeecCCCC
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~vP~----~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
+++|+|||+||+.|.+..|+|.|+++= -.+|..-|..+++.|.=..-.+.+
T Consensus 82 dlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~ 136 (170)
T KOG3349|consen 82 DLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST 136 (170)
T ss_pred cEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccc
Confidence 999999999999999999999999983 479999999999999888776544
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.89 E-value=2e-08 Score=84.24 Aligned_cols=144 Identities=20% Similarity=0.178 Sum_probs=114.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC--CCCC------CCCCCEEEeccCChhhhhCCCCeeEE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG--ENMS------GKIDKILLKSWAPQRDILDHPNVKVF 86 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~--~~~~------~~~~nv~~~~~~pq~~lL~h~~~~l~ 86 (244)
..-|+|++|+. .|..+.-.++..+.+.+..+-...+. ..+. ...+|+.+......+.-|. ..+++.
T Consensus 158 ~r~ilI~lGGs-----Dpk~lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LM-ke~d~a 231 (318)
T COG3980 158 KRDILITLGGS-----DPKNLTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELM-KEADLA 231 (318)
T ss_pred hheEEEEccCC-----ChhhhHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHH-Hhcchh
Confidence 45699999999 56677888888888877655555553 2222 2456788777776554333 789999
Q ss_pred EecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhC
Q psy16503 87 ISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 166 (244)
Q Consensus 87 IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~ 166 (244)
|+.||. |++|++..|+|.+++|+...|..-|..++..|+...++.. ++.......+.++.+|+..|.+....++.+-+
T Consensus 232 I~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~~~rk~l~~~~~~i~d 309 (318)
T COG3980 232 ISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LKDLAKDYEILQIQKDYARRKNLSFGSKLIGD 309 (318)
T ss_pred eeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-CchHHHHHHHHHhhhCHHHhhhhhhccceeec
Confidence 999997 8999999999999999999999999999999999998766 67788888889999998888887776665544
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.3e-08 Score=86.67 Aligned_cols=163 Identities=13% Similarity=0.089 Sum_probs=98.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC--------CCCC-CCCEEEeccCChhhhhCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------MSGK-IDKILLKSWAPQRDILDH 80 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~--------~~~~-~~nv~~~~~~pq~~lL~h 80 (244)
+++|++..||.... .......+++++..+ + .+++|..++.. .... .-++.+..- .-.+++
T Consensus 186 ~~~il~~~gsr~~~---~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-- 259 (380)
T PRK00025 186 ARVLALLPGSRGQE---IKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLDG-QKREAM-- 259 (380)
T ss_pred CCEEEEECCCCHHH---HHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEcc-cHHHHH--
Confidence 34566666765320 112344455554332 3 36777654211 1111 223444331 234566
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCc--------chhhH-----HHHHHHcCceeecCCCCCCHHHHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFG--------DQKAN-----IRVVEKAGFGVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~--------dQ~~n-----a~~~~~~G~g~~l~~~~~~~~~l~~ai~~l 147 (244)
..+|++|+.+|.+++ ||+++|+|+|.+|-.+ +|..| +..+.+.+++..+..++.+++++.+++.++
T Consensus 260 ~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 338 (380)
T PRK00025 260 AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPL 338 (380)
T ss_pred HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence 789999999999877 9999999999985432 22222 233333444444555677899999999999
Q ss_pred hCChhHHHHHHHHHHHHhCC-CCChHHHHHHHHHHHHH
Q psy16503 148 LGNPSYKKRAEKVARLFQDR-PMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 148 l~~~~y~~~a~~~s~~~~~~-~~~~~~~a~~~ie~~~~ 184 (244)
++|++.++++.+.++..... ..++.+++++.+...++
T Consensus 339 l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 339 LADGARRQALLEGFTELHQQLRCGADERAAQAVLELLK 376 (380)
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Confidence 99998887777765333322 24578888888776654
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.2e-08 Score=88.77 Aligned_cols=158 Identities=16% Similarity=0.098 Sum_probs=105.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CC-eEEEEecCC----CCC------CCCCCEEEeccCChhhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQ-RVIWKWEGE----NMS------GKIDKILLKSWAPQRDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~-~viw~~~~~----~~~------~~~~nv~~~~~~pq~~lL~ 79 (244)
+++|++-.||.... . ......+++++..+ +. ++++...+. .+. +.+..+....+ +..+++
T Consensus 191 ~~~Ilvl~GSR~ae--i-~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l- 265 (385)
T TIGR00215 191 GETLALLPGSRGSE--V-EKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG-DARKAM- 265 (385)
T ss_pred CCEEEEECCCCHHH--H-HHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc-hHHHHH-
Confidence 56777777777431 1 23455555554433 22 454433221 010 11223444433 344577
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEec----CCCc---------chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHH
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGI----PMFG---------DQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 146 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~v----P~~~---------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 146 (244)
..+|++|+..|..|+ |++++|+|+|++ |+.. +|..|+..+...+++..+..++++++.|.+.+.+
T Consensus 266 -~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ 343 (385)
T TIGR00215 266 -FAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLL 343 (385)
T ss_pred -HhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHH
Confidence 789999999999888 999999999999 7631 3888999999999999988889999999999999
Q ss_pred HhCCh----hHHHHHHHHHHHHhCCC--CChHHHHHHHH
Q psy16503 147 VLGNP----SYKKRAEKVARLFQDRP--MPPLDTAIYWI 179 (244)
Q Consensus 147 ll~~~----~y~~~a~~~s~~~~~~~--~~~~~~a~~~i 179 (244)
+++|+ ++++++.+--..++.+- .++.++++..+
T Consensus 344 ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 344 LLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99998 77666655444443321 34566776643
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.4e-07 Score=77.37 Aligned_cols=137 Identities=18% Similarity=0.268 Sum_probs=94.4
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC----CeEEEEecCCC---CCCCCCCEEEeccCChhh---hhCCCCeeE
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QRVIWKWEGEN---MSGKIDKILLKSWAPQRD---ILDHPNVKV 85 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~----~~viw~~~~~~---~~~~~~nv~~~~~~pq~~---lL~h~~~~l 85 (244)
+.+++..|+.... +-...+++++..+. ..+++.-++.. +....+|+.+.+++|+.+ ++ ..+|+
T Consensus 197 ~~~i~~~G~~~~~-----k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~~d~ 269 (364)
T cd03814 197 RPVLLYVGRLAPE-----KNLEALLDADLPLRRRPPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAY--ASADV 269 (364)
T ss_pred CeEEEEEeccccc-----cCHHHHHHHHHHhhhcCCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHH--HhCCE
Confidence 5667777776321 22333444444332 34444332221 223567899999988664 56 67899
Q ss_pred EEecCC----hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 86 FISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 86 ~IthgG----~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
++..++ .+++.||+++|+|+|+.+..+ +...+.+.+.|...+.. +.+++.++|.+++.|++.++++.+-+
T Consensus 270 ~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~~~~--~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 270 FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLVEPG--DAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 887643 478999999999999987654 44556667889888654 57889999999999998888888777
Q ss_pred HHHh
Q psy16503 162 RLFQ 165 (244)
Q Consensus 162 ~~~~ 165 (244)
....
T Consensus 344 ~~~~ 347 (364)
T cd03814 344 RAEA 347 (364)
T ss_pred HHHH
Confidence 7665
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-06 Score=65.83 Aligned_cols=128 Identities=18% Similarity=0.210 Sum_probs=81.8
Q ss_pred EEEEcCCCCCCCCCCHHH-HHHHHHHHhcCCCeEEEEecCCCCCCCCC-CEEEeccCChhhhhCCCCeeEEEecCChhhH
Q psy16503 18 IYFSMGSIIQGKSFPSDK-RKAFLRAFEQIPQRVIWKWEGENMSGKID-KILLKSWAPQRDILDHPNVKVFISHGGFLGT 95 (244)
Q Consensus 18 I~vs~Gs~~~~~~~~~~~-~~~i~~al~~~~~~viw~~~~~~~~~~~~-nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~ 95 (244)
++|+-||...+ +..-. ..++.+..+....++|.++|+.+...... .+.-+++-+-.+-+.| .++++|+|+|.||+
T Consensus 2 ifVTvGstf~~--f~rlv~k~e~~el~~~i~e~lIvQyGn~d~kpvagl~v~~F~~~~kiQsli~-darIVISHaG~GSI 78 (161)
T COG5017 2 IFVTVGSTFYP--FNRLVLKIEVLELTELIQEELIVQYGNGDIKPVAGLRVYGFDKEEKIQSLIH-DARIVISHAGEGSI 78 (161)
T ss_pred eEEEecCccch--HHHHHhhHHHHHHHHHhhhheeeeecCCCcccccccEEEeechHHHHHHHhh-cceEEEeccCcchH
Confidence 78999999431 11111 11122222222348999999744322122 3444445566665664 67799999999999
Q ss_pred HHHHHhCCcEEecCCC--------cchhhHHHHHHHcCceeecCCCCC-CHHHHHHHHHHHh
Q psy16503 96 TEALYSGVPIIGIPMF--------GDQKANIRVVEKAGFGVTLPYDQI-TEETVLVALRTVL 148 (244)
Q Consensus 96 ~Eal~~gvP~i~vP~~--------~dQ~~na~~~~~~G~g~~l~~~~~-~~~~l~~ai~~ll 148 (244)
..++..++|.|++|-- .+|..-|..+.+.+.-+...+.+. -.+-+.....+++
T Consensus 79 L~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~~L~a~l~~s~~~v~ 140 (161)
T COG5017 79 LLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTELVLQAGLQVSVADVL 140 (161)
T ss_pred HHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCchhhHHhHhhhhhhhc
Confidence 9999999999999963 478899999999998888765432 2333444444444
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.8e-07 Score=70.07 Aligned_cols=146 Identities=18% Similarity=0.269 Sum_probs=97.9
Q ss_pred HHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc-----CCCeEEEEecCCC----------CCCCCCCEEEe
Q psy16503 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ-----IPQRVIWKWEGEN----------MSGKIDKILLK 69 (244)
Q Consensus 5 ~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~-----~~~~viw~~~~~~----------~~~~~~nv~~~ 69 (244)
.+.......+++.+++..|.... ..-...+++++.. .+.-.++.+|... ....++++.+.
T Consensus 4 ~~~~~~~~~~~~~~il~~g~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~ 78 (172)
T PF00534_consen 4 KLREKLKIPDKKKIILFIGRLDP-----EKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFL 78 (172)
T ss_dssp HHHHHTTT-TTSEEEEEESESSG-----GGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEE
T ss_pred HHHHHcCCCCCCeEEEEEecCcc-----ccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccc
Confidence 34444444457888888888854 2334444454443 2333444455211 12456799999
Q ss_pred ccCC--hh-hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHH
Q psy16503 70 SWAP--QR-DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLV 142 (244)
Q Consensus 70 ~~~p--q~-~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 142 (244)
++.+ +. +++ ..++++++. |+..++.||+++|+|+|+-. -..+...+.+.+.|..++.. +.+++.+
T Consensus 79 ~~~~~~~l~~~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~~~~--~~~~l~~ 150 (172)
T PF00534_consen 79 GYVPDDELDELY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLFDPN--DIEELAD 150 (172)
T ss_dssp ESHSHHHHHHHH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEESTT--SHHHHHH
T ss_pred cccccccccccc--ccceeccccccccccccccccccccccceeecc----ccCCceeeccccceEEeCCC--CHHHHHH
Confidence 9988 32 455 558888876 66789999999999999864 34455666666779998765 7899999
Q ss_pred HHHHHhCChhHHHHHHHHHHH
Q psy16503 143 ALRTVLGNPSYKKRAEKVARL 163 (244)
Q Consensus 143 ai~~ll~~~~y~~~a~~~s~~ 163 (244)
+|.++++++++++++.+.++.
T Consensus 151 ~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 151 AIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHhcC
Confidence 999999999888888877654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.9e-06 Score=73.40 Aligned_cols=113 Identities=17% Similarity=0.182 Sum_probs=82.8
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEec-----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHH
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEE 138 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~Ith-----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~ 138 (244)
++.+.+...+. +++ ..+|+++.. ||..++.||+++|+|+|.-|..+++...+..+.+.|+++... +.+
T Consensus 303 ~v~l~~~~~el~~~y--~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~----d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLY--AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE----DAE 376 (425)
T ss_pred cEEEEecHHHHHHHH--HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC----CHH
Confidence 34444443333 455 678884431 445569999999999999999888888888887788777643 579
Q ss_pred HHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 139 TVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 139 ~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
+|.++|.++++|++.++++.+.+.....+.....++....++..+
T Consensus 377 ~La~~l~~ll~~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 377 DLAKAVTYLLTDPDARQAYGEAGVAFLKQNQGALQRTLQLLEPYL 421 (425)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhc
Confidence 999999999999988888888777665544566677776666433
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=74.15 Aligned_cols=138 Identities=19% Similarity=0.275 Sum_probs=93.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC---------CCCCCCCEEEeccCChhh---hhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN---------MSGKIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~---------~~~~~~nv~~~~~~pq~~---lL~h~ 81 (244)
++.+++..|+... .+-...+++++.+++ ..+++.-++.. .....+||.+.+|+|+.+ ++ .
T Consensus 190 ~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~--~ 262 (357)
T cd03795 190 GRPFFLFVGRLVY-----YKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALL--A 262 (357)
T ss_pred CCcEEEEeccccc-----ccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHH--H
Confidence 4567788888743 233555677777776 45444333211 123567999999999754 55 5
Q ss_pred CeeEEEe-----c-CChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 82 NVKVFIS-----H-GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 82 ~~~l~It-----h-gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
.+++++. + |...++.||+++|+|+|+.+..+... .+. ..+.|...+.+ +.+++.++|.++++|++.+
T Consensus 263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i~~~~~~g~~~~~~--d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YVNLHGVTGLVVPPG--DPAALAEAIRRLLEDPELR 336 (357)
T ss_pred hCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HHhhCCCceEEeCCC--CHHHHHHHHHHHHHCHHHH
Confidence 6777772 1 33458999999999999976554433 333 36778887654 6899999999999998877
Q ss_pred HHHHHHHHHHh
Q psy16503 155 KRAEKVARLFQ 165 (244)
Q Consensus 155 ~~a~~~s~~~~ 165 (244)
+++.+.+....
T Consensus 337 ~~~~~~~~~~~ 347 (357)
T cd03795 337 ERLGEAARERA 347 (357)
T ss_pred HHHHHHHHHHH
Confidence 77777665554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.8e-06 Score=71.98 Aligned_cols=138 Identities=17% Similarity=0.238 Sum_probs=92.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCCCC------CCCCCEEEeccCChhh---hhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGENMS------GKIDKILLKSWAPQRD---ILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~~~------~~~~nv~~~~~~pq~~---lL~h~~ 82 (244)
++.+++..|+.... +-...+++++..+ +.++++.-++.... ...+++.+.+++|+.+ ++ ..
T Consensus 190 ~~~~i~~~G~~~~~-----k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~ 262 (359)
T cd03823 190 GRLRFGFIGQLTPH-----KGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFY--AE 262 (359)
T ss_pred CceEEEEEecCccc-----cCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHH--Hh
Confidence 46777788887432 2233444554444 23555433222111 2357899999997654 46 67
Q ss_pred eeEEEe-----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 83 VKVFIS-----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 83 ~~l~It-----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
+++++. -|...++.||+++|+|+|+.+.. .....+.+.+.|..++.+ +.+++.+++.++++|+..++.+
T Consensus 263 ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~~~ 336 (359)
T cd03823 263 IDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDGVNGLLFPPG--DAEDLAAALERLIDDPDLLERL 336 (359)
T ss_pred CCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCCCcEEEECCC--CHHHHHHHHHHHHhChHHHHHH
Confidence 888884 23456899999999999997653 345566666688888765 4899999999999998877777
Q ss_pred HHHHHHHh
Q psy16503 158 EKVARLFQ 165 (244)
Q Consensus 158 ~~~s~~~~ 165 (244)
.+.+....
T Consensus 337 ~~~~~~~~ 344 (359)
T cd03823 337 RAGIEPPR 344 (359)
T ss_pred HHhHHHhh
Confidence 76655544
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.7e-06 Score=73.90 Aligned_cols=137 Identities=18% Similarity=0.280 Sum_probs=91.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCCC---------------CCCCCCEEEeccCCh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGENM---------------SGKIDKILLKSWAPQ 74 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~~---------------~~~~~nv~~~~~~pq 74 (244)
++.+++..|+.... .-...+++++..+ + .++++.-++... .+..+|+.+.+++|+
T Consensus 219 ~~~~i~~~gr~~~~-----k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 293 (398)
T cd03800 219 DKPRILAVGRLDPR-----KGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSR 293 (398)
T ss_pred CCcEEEEEcccccc-----cCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCH
Confidence 45677788887432 2233344444433 2 355554433210 123468999999997
Q ss_pred hh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHH
Q psy16503 75 RD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 75 ~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~l 147 (244)
.+ ++ ..+++++.. |-..++.||+++|+|+|+.+..+ ....+.+.+.|..++.. +.+++.++|.++
T Consensus 294 ~~~~~~~--~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~l 365 (398)
T cd03800 294 EDLPALY--RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDPR--DPEALAAALRRL 365 (398)
T ss_pred HHHHHHH--HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCCC--CHHHHHHHHHHH
Confidence 65 46 668888853 33468999999999999876543 44556666789988654 589999999999
Q ss_pred hCChhHHHHHHHHHHHH
Q psy16503 148 LGNPSYKKRAEKVARLF 164 (244)
Q Consensus 148 l~~~~y~~~a~~~s~~~ 164 (244)
++|+..++++.+-+...
T Consensus 366 ~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 366 LTDPALRRRLSRAGLRR 382 (398)
T ss_pred HhCHHHHHHHHHHHHHH
Confidence 99987777766655544
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.3e-05 Score=68.67 Aligned_cols=134 Identities=21% Similarity=0.364 Sum_probs=91.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC----------CCCCCCCEEEeccCChh---h
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN----------MSGKIDKILLKSWAPQR---D 76 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~----------~~~~~~nv~~~~~~pq~---~ 76 (244)
++..++.+|+... .+-...+++++..+ + .++++ +|+.. ..+.++++.+.++++.. +
T Consensus 198 ~~~~i~~~g~~~~-----~k~~~~~i~~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 198 DEPVILFVGRLVP-----RKGVDLLLEALAKLRKEYPDVRLVI-VGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred CCeEEEEecchhh-----hcCHHHHHHHHHHHhhhcCCeEEEE-EeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHH
Confidence 4577788887743 22234444544433 2 23333 34311 12356799999999744 4
Q ss_pred hhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 77 ILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 77 lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
++ ..++++|. -|..+++.||+++|+|+|+.+. ......+.+.+.|...+.. +.+++.++|.+++.|+.
T Consensus 272 ~~--~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 272 LY--AAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDGETGLLVPPG--DPEALAEAILRLLDDPE 343 (374)
T ss_pred HH--HhcCEEEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCCcceEEeCCC--CHHHHHHHHHHHHcChH
Confidence 56 67888884 3557899999999999999866 2345556657888888654 48999999999999988
Q ss_pred HHHHHHHHHH
Q psy16503 153 YKKRAEKVAR 162 (244)
Q Consensus 153 y~~~a~~~s~ 162 (244)
.++++.+.+.
T Consensus 344 ~~~~~~~~~~ 353 (374)
T cd03801 344 LRRRLGEAAR 353 (374)
T ss_pred HHHHHHHHHH
Confidence 7777776665
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.1e-06 Score=75.71 Aligned_cols=132 Identities=16% Similarity=0.180 Sum_probs=88.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC---eEEEEecCC---CC----CCC---CCCEEEeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---RVIWKWEGE---NM----SGK---IDKILLKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~---~viw~~~~~---~~----~~~---~~nv~~~~~~pq~---~lL 78 (244)
++.+++++|..... .+.+.+..+++++..+.. .+++..++. .+ ... .+++.+.+..+.. .++
T Consensus 198 ~~~vlv~~~r~~~~--~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 198 KKYILVTLHRVENV--DDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCEEEEEeCCcccc--CChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH
Confidence 46788888776321 135667778888776643 333322221 11 111 4688887765543 345
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..+|++|+..| +.+.||+++|+|+|.++-..+ +..+.+.|+++.+.. +.+++.+++.++++++..+.+++
T Consensus 276 --~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 276 --KNADLVLTDSG-GIQEEASFLGVPVLNLRDRTE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred --HcCcEEEEcCc-cHHhhhhhcCCCEEeeCCCCc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCchhhhcCC
Confidence 67999999988 678899999999999864322 445667888877742 47899999999998877666654
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=98.42 E-value=9e-06 Score=72.15 Aligned_cols=150 Identities=13% Similarity=0.171 Sum_probs=95.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC--------CCCCCCCEEEeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------MSGKIDKILLKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~---~lL 78 (244)
+++++++++-... . .+.+..+++++..+ + .++++..+++. ..+..+++.+.+.++.. .++
T Consensus 197 ~~~vl~~~hr~~~---~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 272 (365)
T TIGR00236 197 KRYILLTLHRREN---V-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLA 272 (365)
T ss_pred CCEEEEecCchhh---h-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHH
Confidence 3566666543211 1 13356666666553 2 35666533211 11234689988876654 455
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..++++++..|. .+.||+++|+|+|.++-.++++. +.+.|.+..+. -+.+++.+++.++++|+..++++.
T Consensus 273 --~~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~g~~~lv~---~d~~~i~~ai~~ll~~~~~~~~~~ 342 (365)
T TIGR00236 273 --ANSHLILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEAGTNKLVG---TDKENITKAAKRLLTDPDEYKKMS 342 (365)
T ss_pred --HhCCEEEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhcCceEEeC---CCHHHHHHHHHHHHhChHHHHHhh
Confidence 678899997765 47999999999999976555442 33467776663 268999999999999988888776
Q ss_pred HHHHHHhCCCCChHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+....+.+ ..+.+++++.++
T Consensus 343 ~~~~~~g~--~~a~~ri~~~l~ 362 (365)
T TIGR00236 343 NASNPYGD--GEASERIVEELL 362 (365)
T ss_pred hcCCCCcC--chHHHHHHHHHH
Confidence 65544433 345566655544
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.6e-05 Score=68.54 Aligned_cols=157 Identities=15% Similarity=0.161 Sum_probs=97.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---------CCCCCCCEEEeccCChh-hhhCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---------MSGKIDKILLKSWAPQR-DILDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~-~lL~h~~~~ 84 (244)
++.+++.+|...... ....+++.+.....+.+.++++.-.+.. ..+.++++.+.++.++. +++ ..++
T Consensus 196 ~~~~il~~g~l~~~K-~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d 272 (371)
T cd04962 196 GEKVLIHISNFRPVK-RIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELL--SIAD 272 (371)
T ss_pred CCeEEEEeccccccc-CHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHH--HhcC
Confidence 456777788774321 1223333322222223446655433321 11235679998887654 556 6788
Q ss_pred EEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 85 VFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 85 l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++.- |...++.||+++|+|+|+.+.. ..+..+.+...|..++.+ +.+++.+++.++++|+..+.++.+.
T Consensus 273 ~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~~~--~~~~l~~~i~~l~~~~~~~~~~~~~ 346 (371)
T cd04962 273 LFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVDVG--DVEAMAEYALSLLEDDELWQEFSRA 346 (371)
T ss_pred EEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcCCC--CHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 88842 4457999999999999997553 345555665678877654 5789999999999998877777766
Q ss_pred HHHHhCCCCChHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie 180 (244)
+.....+..+....+..+.+
T Consensus 347 ~~~~~~~~fs~~~~~~~~~~ 366 (371)
T cd04962 347 ARNRAAERFDSERIVPQYEA 366 (371)
T ss_pred HHHHHHHhCCHHHHHHHHHH
Confidence 66552223554444444443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.39 E-value=9e-06 Score=70.66 Aligned_cols=141 Identities=16% Similarity=0.197 Sum_probs=89.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCCC---------CCCCCCCEEEeccCChhh---hhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGEN---------MSGKIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~~---lL~h~ 81 (244)
++.+++..|+..... ..+.+-..++.+.+. +.++++ +|... .....+|+.+.+++|+.+ ++ .
T Consensus 219 ~~~~i~~~G~~~~~k--~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~ 293 (394)
T cd03794 219 DKFVVLYAGNIGRAQ--GLDTLLEAAALLKDRPDIRFLI-VGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELL--A 293 (394)
T ss_pred CcEEEEEecCccccc--CHHHHHHHHHHHhhcCCeEEEE-eCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHH--H
Confidence 467777788774321 222232333333333 234444 44311 112357899999988664 55 6
Q ss_pred CeeEEEecCC---------hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 82 NVKVFISHGG---------FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 82 ~~~l~IthgG---------~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
.++++|.... .+++.||+++|+|+|+.+..+.+. .+.+.+.|..++.+ +.+++.++|.+++.|++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LVEEAGAGLVVPPG--DPEALAAAILELLDDPE 367 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hhccCCcceEeCCC--CHHHHHHHHHHHHhChH
Confidence 7888875322 345899999999999998765433 33333778887654 57999999999999988
Q ss_pred HHHHHHHHHHHHhC
Q psy16503 153 YKKRAEKVARLFQD 166 (244)
Q Consensus 153 y~~~a~~~s~~~~~ 166 (244)
.++++.+.+..+..
T Consensus 368 ~~~~~~~~~~~~~~ 381 (394)
T cd03794 368 ERAEMGENGRRYVE 381 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777776665544
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-05 Score=70.65 Aligned_cols=95 Identities=21% Similarity=0.307 Sum_probs=71.7
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec----------CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCcee
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH----------GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 128 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----------gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~ 128 (244)
.++++.+.+++|+.+ ++ ..+++++.- |..+++.||+++|+|+|+-+..+ +...+.+.+.|.
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~--~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~ 316 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELM--RRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGL 316 (367)
T ss_pred CCCeEEECCCCCHHHHHHHH--HhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeE
Confidence 467899999998654 46 677887742 23579999999999999887643 556666778898
Q ss_pred ecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 129 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 129 ~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
.++.. +.+++.++|.++++|++.++++.+.+...
T Consensus 317 ~~~~~--d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPEG--DVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 88654 57999999999999987666665554443
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.1e-05 Score=67.02 Aligned_cols=93 Identities=20% Similarity=0.240 Sum_probs=69.1
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
.++++.+.+|+++.+ ++ ..+++++.- |-.+++.||+++|+|+|+.+..+ ....+.+ +.|...+.
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~~~-- 330 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAAL--ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVVDD-- 330 (375)
T ss_pred ccceEEEcCCCChHHHHHHH--hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEeCC--
Confidence 467899999998554 46 567777753 23578999999999999976533 3344444 77877754
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
+.+++.++|.++++|++.++++.+.+...
T Consensus 331 -~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 -DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred -ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999999987777777766665
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.7e-05 Score=66.40 Aligned_cols=92 Identities=16% Similarity=0.257 Sum_probs=64.6
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeec-CC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL-PY 132 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l-~~ 132 (244)
.+.++.+.+++|+. +++ ..+|+++.. .| ..++.||+++|+|+|+....+ +...+.+...|..+ +.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~--~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l~~~ 328 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYY--PLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHLAEP 328 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHH--HhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEEeCC
Confidence 35688899998855 446 678888752 33 367899999999999986532 34455555678744 33
Q ss_pred CCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 133 DQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 133 ~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
. +.+++.++|.++++|+..+ ++.+-+.
T Consensus 329 ~--d~~~la~~I~~ll~d~~~~-~~~~~ar 355 (380)
T PRK15484 329 M--TSDSIISDINRTLADPELT-QIAEQAK 355 (380)
T ss_pred C--CHHHHHHHHHHHHcCHHHH-HHHHHHH
Confidence 3 6899999999999998753 3333333
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.9e-06 Score=73.09 Aligned_cols=135 Identities=18% Similarity=0.258 Sum_probs=91.1
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---C-CCCCCCEEEeccCChh---hhhCCCCeeEEEe-
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---M-SGKIDKILLKSWAPQR---DILDHPNVKVFIS- 88 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~-~~~~~nv~~~~~~pq~---~lL~h~~~~l~It- 88 (244)
..++..|.... .+-...+++++..++.++++.-++.. + ...++||.+.+++|+. +++ ..+++++.
T Consensus 196 ~~il~~G~~~~-----~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~--~~ad~~v~p 268 (351)
T cd03804 196 DYYLSVGRLVP-----YKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLY--ARARAFLFP 268 (351)
T ss_pred CEEEEEEcCcc-----ccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHH--HhCCEEEEC
Confidence 34566777743 33456677888888876655433321 1 1356899999999975 456 56777774
Q ss_pred -cCC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh-hHHHHHHHHHHHH
Q psy16503 89 -HGG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP-SYKKRAEKVARLF 164 (244)
Q Consensus 89 -hgG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~-~y~~~a~~~s~~~ 164 (244)
.-| ..++.||+++|+|+|+....+ ....+.+.+.|..++.+ +.+++.++|.++++|+ ..++++++.++.+
T Consensus 269 s~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 341 (351)
T cd03804 269 AEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEEQ--TVESLAAAVERFEKNEDFDPQAIRAHAERF 341 (351)
T ss_pred CcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCCC--CHHHHHHHHHHHHhCcccCHHHHHHHHHhc
Confidence 222 356889999999999986533 23345555788888755 5788999999999887 5556665555433
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.4e-05 Score=68.24 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=70.2
Q ss_pred CCCCEEEeccCCh-hhhhCCCCeeEEEecC----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcC-ceeecCCCCC
Q psy16503 62 KIDKILLKSWAPQ-RDILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG-FGVTLPYDQI 135 (244)
Q Consensus 62 ~~~nv~~~~~~pq-~~lL~h~~~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G-~g~~l~~~~~ 135 (244)
.++++.+.++.+. .+++ .++++++.-. ..+++.||+++|+|+|+.+..+.+ ..+.+.| .|..++..
T Consensus 233 ~~~~v~~~g~~~~~~~~~--~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~~-- 304 (348)
T cd03820 233 LEDRVILLGFTKNIEEYY--AKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPNG-- 304 (348)
T ss_pred CCCeEEEcCCcchHHHHH--HhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCCC--
Confidence 4567888887443 3566 6788888653 257899999999999987654432 2344455 88888654
Q ss_pred CHHHHHHHHHHHhCChhHHHHHHHHHHHHh
Q psy16503 136 TEETVLVALRTVLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 136 ~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~ 165 (244)
+.+++.++|.++++|++.++++.+.+..+.
T Consensus 305 ~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 305 DVEALAEALLRLMEDEELRKRMGANARESA 334 (348)
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 479999999999999998888877765554
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.4e-05 Score=71.30 Aligned_cols=166 Identities=15% Similarity=0.245 Sum_probs=97.9
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------------CCCCCCCEEEeccCChhhhh-C
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------------MSGKIDKILLKSWAPQRDIL-D 79 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------------~~~~~~nv~~~~~~pq~~lL-~ 79 (244)
+++.++|.+|....+ ++++.++...+.|++.|...+|...... ..-.++.+.+.+..|..+.| .
T Consensus 282 p~d~vvF~~fn~~~K---I~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~ 358 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFK---ISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHLRR 358 (468)
T ss_dssp -SSSEEEEE-S-GGG-----HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHHHH
T ss_pred CCCceEEEecCcccc---CCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHH
Confidence 346788888888865 8899999999999999998888765421 11135678888888876544 2
Q ss_pred CCCeeEEEe---cCChhhHHHHHHhCCcEEecCCC-cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 80 HPNVKVFIS---HGGFLGTTEALYSGVPIIGIPMF-GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 80 h~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~-~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
+..+|+++- .+|.+|.+||++.|||+|..|-- .-...-+..+...|+...+-. +.++-.+.--++-+|+++++
T Consensus 359 ~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La~D~~~l~ 435 (468)
T PF13844_consen 359 YQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLATDPERLR 435 (468)
T ss_dssp GGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHHH-HHHHH
T ss_pred hhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHhCCHHHHH
Confidence 366888876 57888999999999999999853 344556777888899877654 45555554446667887776
Q ss_pred HHHHH-HHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 156 RAEKV-ARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 156 ~a~~~-s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++- .+.....|.-.....+.-+|..++
T Consensus 436 ~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 436 ALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp HHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 66553 334433343334555555555443
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.29 E-value=2e-05 Score=67.74 Aligned_cols=140 Identities=18% Similarity=0.258 Sum_probs=88.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc-CC-CeEEEEecCCCC----------CCCCCCEEEeccCChh-hhhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ-IP-QRVIWKWEGENM----------SGKIDKILLKSWAPQR-DILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~-~~-~~viw~~~~~~~----------~~~~~nv~~~~~~pq~-~lL~h~ 81 (244)
++.+++..|+..... ..+.+-..++.+.+ .+ .++++.-++... ....+++.+.++..+. +++ .
T Consensus 187 ~~~~i~~~G~~~~~k--~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~ 262 (359)
T cd03808 187 DDPVFLFVARLLKDK--GIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELL--A 262 (359)
T ss_pred CCcEEEEEecccccc--CHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHH--H
Confidence 467888888874321 22222233333332 22 344443322111 0134578888875444 566 6
Q ss_pred CeeEEEecC----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 82 NVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 82 ~~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
.+++++.-. ..+++.||+++|+|+|+.+..+ ....+.+.+.|..++.+ +.+++.++|.+++.|++..+++
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~~--~~~~~~~~i~~l~~~~~~~~~~ 336 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPPG--DAEALADAIERLIEDPELRARM 336 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECCC--CHHHHHHHHHHHHhCHHHHHHH
Confidence 788888643 3679999999999999976543 34455556788888654 5899999999999998877776
Q ss_pred HHHHHHH
Q psy16503 158 EKVARLF 164 (244)
Q Consensus 158 ~~~s~~~ 164 (244)
.+.+...
T Consensus 337 ~~~~~~~ 343 (359)
T cd03808 337 GQAARKR 343 (359)
T ss_pred HHHHHHH
Confidence 6665555
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.1e-05 Score=68.06 Aligned_cols=145 Identities=19% Similarity=0.236 Sum_probs=90.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEE-ecCCCC----------CCCCCCEEEeccCChhh---hhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWK-WEGENM----------SGKIDKILLKSWAPQRD---ILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~-~~~~~~----------~~~~~nv~~~~~~pq~~---lL~ 79 (244)
++..+++.|....... ...+++.+....+..+ ..+.|. .|+... .....++.+.+|+|+.+ ++.
T Consensus 229 ~~~~il~~Grl~~~Kg-~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 229 DTLRIVSCSYLVPVKR-VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CCEEEEEeeccccccC-HHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 4566777777754222 1233333333222223 255554 333111 12345799999999764 444
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
...+++|+.. |-.+++.||+++|+|+|+-...+ ....+.+.+.|..+... .+.+++.++|.++++|+..++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~~-~~~~~la~~I~~ll~~~~~~~ 382 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSKD-PTPNELVSSLSKFIDNEEEYQ 382 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCCC-CCHHHHHHHHHHHHhCHHHHH
Confidence 3457787754 33578999999999999875433 34555555588887643 268999999999999988777
Q ss_pred HHHHHHHHHh
Q psy16503 156 RAEKVARLFQ 165 (244)
Q Consensus 156 ~a~~~s~~~~ 165 (244)
++.+.+...-
T Consensus 383 ~m~~~ar~~~ 392 (407)
T cd04946 383 TMREKAREKW 392 (407)
T ss_pred HHHHHHHHHH
Confidence 7776665544
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=98.24 E-value=4e-05 Score=70.41 Aligned_cols=138 Identities=17% Similarity=0.207 Sum_probs=93.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC---CC--CCCCCEEEeccCChhh---hhCCCCeeE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN---MS--GKIDKILLKSWAPQRD---ILDHPNVKV 85 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~---~~--~~~~nv~~~~~~pq~~---lL~h~~~~l 85 (244)
++.+++..|+.. +.+....+++++...+. ++++.-++.. +. ....++.+.+++|..+ ++ ..+|+
T Consensus 262 ~~~~i~~vGrl~-----~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~--~~aDv 334 (465)
T PLN02871 262 EKPLIVYVGRLG-----AEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAY--ASGDV 334 (465)
T ss_pred CCeEEEEeCCCc-----hhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHH--HHCCE
Confidence 345667778773 34556777888877764 5554333211 11 1235799999997654 56 67888
Q ss_pred EEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH---cCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 86 FISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK---AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 86 ~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~---~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
||.- |-..++.||+++|+|+|+....+ ....+.+ .+.|..++.+ +.+++.++|.++++|++.++++.
T Consensus 335 ~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~~--d~~~la~~i~~ll~~~~~~~~~~ 408 (465)
T PLN02871 335 FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTPG--DVDDCVEKLETLLADPELRERMG 408 (465)
T ss_pred EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHH
Confidence 8853 33467999999999999876532 2334444 6788888765 57999999999999988777766
Q ss_pred HHHHHHh
Q psy16503 159 KVARLFQ 165 (244)
Q Consensus 159 ~~s~~~~ 165 (244)
+.++...
T Consensus 409 ~~a~~~~ 415 (465)
T PLN02871 409 AAAREEV 415 (465)
T ss_pred HHHHHHH
Confidence 6665443
|
|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.23 E-value=0.0001 Score=64.00 Aligned_cols=107 Identities=19% Similarity=0.250 Sum_probs=75.8
Q ss_pred CCCCEEEecc-CChh---hhhCCCCeeEEEe----c--CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecC
Q psy16503 62 KIDKILLKSW-APQR---DILDHPNVKVFIS----H--GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLP 131 (244)
Q Consensus 62 ~~~nv~~~~~-~pq~---~lL~h~~~~l~It----h--gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~ 131 (244)
..+++.+.+. +|+. +++ ..+++++. - |..+++.||+++|+|+|+.+..+ ...+...+.|..++
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~--~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~ 317 (366)
T cd03822 245 LADRVIFINRYLPDEELPELF--SAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVP 317 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHH--hhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEc
Confidence 3568888764 8764 456 67888874 2 44568999999999999987644 34455567788876
Q ss_pred CCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy16503 132 YDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYW 178 (244)
Q Consensus 132 ~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ 178 (244)
.. +.+++.+++.++++|++.+.++.+.+.....+ .+....+..+
T Consensus 318 ~~--d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~ 361 (366)
T cd03822 318 PG--DPAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAERY 361 (366)
T ss_pred CC--CHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHHH
Confidence 55 47999999999999977777777766666554 5544444333
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.6e-05 Score=64.66 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=64.7
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
.++|+.+.+++|+. +++ .++++++. -|..+++.||+++|+|+|+-+..+ ....+.+.+.|...+..
T Consensus 257 ~~~~v~~~g~~~~~~~~~~~--~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~~~~- 329 (377)
T cd03798 257 LEDRVTFLGAVPHEEVPAYY--AAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLVPPG- 329 (377)
T ss_pred CcceEEEeCCCCHHHHHHHH--HhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEECCC-
Confidence 46789999999865 455 56788773 356789999999999999876533 44556666778887654
Q ss_pred CCHHHHHHHHHHHhCChhH
Q psy16503 135 ITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y 153 (244)
+.+++.++|.++++++..
T Consensus 330 -~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 330 -DPEALAEAILRLLADPWL 347 (377)
T ss_pred -CHHHHHHHHHHHhcCcHH
Confidence 589999999999988774
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.8e-05 Score=65.55 Aligned_cols=135 Identities=20% Similarity=0.279 Sum_probs=82.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC----------CCCCCCCEEEeccCChh-hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN----------MSGKIDKILLKSWAPQR-DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~----------~~~~~~nv~~~~~~pq~-~lL 78 (244)
++.+++..|+.... +-...+++++.. .+ .++++.-.+.. ..+.++++.+.+..++. +++
T Consensus 192 ~~~~i~~~G~~~~~-----K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 266 (365)
T cd03807 192 DTFLIGIVARLHPQ-----KDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALL 266 (365)
T ss_pred CCeEEEEecccchh-----cCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHH
Confidence 45677788887432 223334444432 22 35555422211 11245677777765433 566
Q ss_pred CCCCeeEEEecC----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 79 DHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 79 ~h~~~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
..+++++... ..+++.||+++|+|+|+.+.. .+...+.+ .|..++.+ +.+++.++|.++++|++.+
T Consensus 267 --~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~--~g~~~~~~--~~~~l~~~i~~l~~~~~~~ 336 (365)
T cd03807 267 --NALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD--TGFLVPPG--DPEALAEAIEALLADPALR 336 (365)
T ss_pred --HhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc--CCEEeCCC--CHHHHHHHHHHHHhChHHH
Confidence 6788888653 358999999999999986543 33444444 56666544 5899999999999987666
Q ss_pred HHHHHHHHHH
Q psy16503 155 KRAEKVARLF 164 (244)
Q Consensus 155 ~~a~~~s~~~ 164 (244)
..+.+.+...
T Consensus 337 ~~~~~~~~~~ 346 (365)
T cd03807 337 QALGEAARER 346 (365)
T ss_pred HHHHHHHHHH
Confidence 5555544443
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00026 Score=63.36 Aligned_cols=96 Identities=18% Similarity=0.134 Sum_probs=71.5
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
..+++.+.+++|.. +++ ..+|+++.- |...++.||+++|+|+|+....+ ....+.+.+.|..++..
T Consensus 281 l~~~v~~~g~~~~~~~~~~l--~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~- 353 (405)
T TIGR03449 281 IADRVRFLPPRPPEELVHVY--RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDGH- 353 (405)
T ss_pred CCceEEECCCCCHHHHHHHH--HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCCC-
Confidence 35689999998865 456 678887742 33468999999999999976533 33455566778888654
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHHh
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~ 165 (244)
+.+++.++|.++++|+..++++.+.+....
T Consensus 354 -d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 354 -DPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 579999999999999887777766665544
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.8e-05 Score=64.56 Aligned_cols=96 Identities=21% Similarity=0.350 Sum_probs=70.3
Q ss_pred CCCCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC
Q psy16503 61 GKIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133 (244)
Q Consensus 61 ~~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~ 133 (244)
+..+|+.+.+++|+.+ ++ ..+++++.. |+..++.||+++|+|+|+.+.. ..+..+.+.+.|..++.+
T Consensus 256 ~~~~~v~~~g~~~~~~~~~~~--~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~~~g~~~~~~ 329 (374)
T cd03817 256 GLADRVIFTGFVPREELPDYY--KAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADGENGFLFPPG 329 (374)
T ss_pred CCCCcEEEeccCChHHHHHHH--HHcCEEEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecCceeEEeCCC
Confidence 3467999999998764 45 567888843 4457899999999999997643 344556666788888754
Q ss_pred CCCHHHHHHHHHHHhCChhHHHHHHHHHHHHh
Q psy16503 134 QITEETVLVALRTVLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 134 ~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~ 165 (244)
+ . ++.+++.+++++++.++.+.+.++...
T Consensus 330 ~--~-~~~~~i~~l~~~~~~~~~~~~~~~~~~ 358 (374)
T cd03817 330 D--E-ALAEALLRLLQDPELRRRLSKNAEESA 358 (374)
T ss_pred C--H-HHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 4 2 899999999999876655555554443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00015 Score=65.55 Aligned_cols=102 Identities=19% Similarity=0.250 Sum_probs=73.8
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec---------CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCcee
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH---------GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 128 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith---------gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~ 128 (244)
..+++.+.+|+|+.+ ++ ..+|+|+.- -| .+++.||+++|+|+|+....+ ....+.+...|.
T Consensus 277 l~~~V~~~G~~~~~el~~~l--~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~ 350 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAML--DDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGW 350 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHH--HhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceE
Confidence 467899999999764 55 678888752 23 467999999999999975533 334455556788
Q ss_pred ecCCCCCCHHHHHHHHHHHhC-ChhHHHHHHHHHHHHhCCCCCh
Q psy16503 129 TLPYDQITEETVLVALRTVLG-NPSYKKRAEKVARLFQDRPMPP 171 (244)
Q Consensus 129 ~l~~~~~~~~~l~~ai~~ll~-~~~y~~~a~~~s~~~~~~~~~~ 171 (244)
.++.. +.+++.++|.++++ |++.++++.+.++....+..+.
T Consensus 351 lv~~~--d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 351 LVPEN--DAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred EeCCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 88654 58999999999999 8887777766665544333443
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00018 Score=62.73 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=68.8
Q ss_pred CCCCEEEeccCC-hh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC
Q psy16503 62 KIDKILLKSWAP-QR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133 (244)
Q Consensus 62 ~~~nv~~~~~~p-q~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~ 133 (244)
...++.+.+|++ +. .++ ..+++++.- |..+++.||+++|+|+|+....+ ....+.+.+.|..++..
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~~~~ 315 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLAKPG 315 (365)
T ss_pred CCCceEecCCcCCHHHHHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEeCCC
Confidence 466899999988 43 356 678888884 44689999999999999875432 22233344577777643
Q ss_pred CCCHHHHHHHHHHHhCChhHHHHHHHHHHHHh
Q psy16503 134 QITEETVLVALRTVLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 134 ~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~ 165 (244)
+.+++.+++.++++|++...++.+.+....
T Consensus 316 --~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 316 --DPEDLAEGIEWLLADPDEREELGEAARELA 345 (365)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 578999999999998876666665555443
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00013 Score=64.50 Aligned_cols=152 Identities=18% Similarity=0.251 Sum_probs=92.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-----CeEEEEecCCC---------CCCCCCCEEEeccCCh-hhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN---------MSGKIDKILLKSWAPQ-RDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-----~~viw~~~~~~---------~~~~~~nv~~~~~~pq-~~lL~ 79 (244)
++.++++.|.....+ ....+++.+.....+.+ .++++.-++.. ..+...++.+.++.++ .+++
T Consensus 193 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 270 (374)
T TIGR03088 193 ESVVVGTVGRLQAVK-DQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALM- 270 (374)
T ss_pred CCeEEEEEecCCccc-CHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHH-
Confidence 467888888885422 23344444444443332 25555432211 0123456777665443 3566
Q ss_pred CCCeeEEEe--c--CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 80 HPNVKVFIS--H--GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 80 h~~~~l~It--h--gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
..+|+++. + |-..++.||+++|+|+|+.+..+ +...+.+...|..++.+ +.+++.++|.++++|+..++
T Consensus 271 -~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 343 (374)
T TIGR03088 271 -QALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPPG--DAVALARALQPYVSDPAARR 343 (374)
T ss_pred -HhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCCC--CHHHHHHHHHHHHhCHHHHH
Confidence 67888884 2 44679999999999999976533 44455555678888654 57899999999999887666
Q ss_pred HHHHHHHHHhCCCCChHHHH
Q psy16503 156 RAEKVARLFQDRPMPPLDTA 175 (244)
Q Consensus 156 ~a~~~s~~~~~~~~~~~~~a 175 (244)
.+.+.++....+..+....+
T Consensus 344 ~~~~~a~~~~~~~fs~~~~~ 363 (374)
T TIGR03088 344 AHGAAGRARAEQQFSINAMV 363 (374)
T ss_pred HHHHHHHHHHHHhCCHHHHH
Confidence 66555544332224433333
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.8e-05 Score=66.09 Aligned_cols=154 Identities=13% Similarity=0.105 Sum_probs=104.8
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CC-eEEEEecCCC-----------------------CCCCCCCEEEec
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQ-RVIWKWEGEN-----------------------MSGKIDKILLKS 70 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~-~viw~~~~~~-----------------------~~~~~~nv~~~~ 70 (244)
..+.|..+|... .++..-....++.+. |. ..||.-...+ .+....+|.+.+
T Consensus 231 r~v~iaaSTH~G----Eeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D 306 (419)
T COG1519 231 RPVWVAASTHEG----EEEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD 306 (419)
T ss_pred CceEEEecCCCc----hHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe
Confidence 467777777632 345455555555443 33 5666533210 112234677777
Q ss_pred cCChhhhhCCCCeeE------EEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHH
Q psy16503 71 WAPQRDILDHPNVKV------FISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 144 (244)
Q Consensus 71 ~~pq~~lL~h~~~~l------~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 144 (244)
-+=..-++. .-+|+ ++.+||.| ..|++++|+|+|.=|....|.+-++++.+.|+|+.++ +++.+.+++
T Consensus 307 tmGEL~l~y-~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~----~~~~l~~~v 380 (419)
T COG1519 307 TMGELGLLY-GIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE----DADLLAKAV 380 (419)
T ss_pred cHhHHHHHH-hhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC----CHHHHHHHH
Confidence 654333332 34444 34589987 8899999999999999999999999999999999997 378899999
Q ss_pred HHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHH
Q psy16503 145 RTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWI 179 (244)
Q Consensus 145 ~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~i 179 (244)
..+++|+..++++.+-...+-.+...+.++....+
T Consensus 381 ~~l~~~~~~r~~~~~~~~~~v~~~~gal~r~l~~l 415 (419)
T COG1519 381 ELLLADEDKREAYGRAGLEFLAQNRGALARTLEAL 415 (419)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 99998888888887776666554445555554443
|
|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.1e-05 Score=65.19 Aligned_cols=136 Identities=14% Similarity=0.194 Sum_probs=81.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC---------CCCCCCCEEEeccCCh-hhhhCCCC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN---------MSGKIDKILLKSWAPQ-RDILDHPN 82 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~---------~~~~~~nv~~~~~~pq-~~lL~h~~ 82 (244)
+++.+++..|+.... ......++.+.....+.+ .++++.-++.. ..+..+|+.+.++..+ .+++ ..
T Consensus 186 ~~~~~~l~~g~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 262 (360)
T cd04951 186 NDTFVILAVGRLVEA-KDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYY--NA 262 (360)
T ss_pred CCCEEEEEEeeCchh-cCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHH--Hh
Confidence 346777888876432 222333333332222222 35665433321 1134568999887654 3566 66
Q ss_pred eeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh-CChhHHHHH
Q psy16503 83 VKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL-GNPSYKKRA 157 (244)
Q Consensus 83 ~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll-~~~~y~~~a 157 (244)
+++++.- |..+++.||+++|+|+|+... ..+...+.+ .|..+..+ +.+++.++|.+++ .++.+++.+
T Consensus 263 ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~g~~~~~~--~~~~~~~~i~~ll~~~~~~~~~~ 334 (360)
T cd04951 263 ADLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD--SGLIVPIS--DPEALANKIDEILKMSGEERDII 334 (360)
T ss_pred hceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC--CceEeCCC--CHHHHHHHHHHHHhCCHHHHHHH
Confidence 7777764 225789999999999998643 334444444 34444433 6889999999998 456666666
Q ss_pred HHH
Q psy16503 158 EKV 160 (244)
Q Consensus 158 ~~~ 160 (244)
.+.
T Consensus 335 ~~~ 337 (360)
T cd04951 335 GAR 337 (360)
T ss_pred HHH
Confidence 554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00011 Score=65.78 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCEEEeccCChhh---hhCCCCeeEEEe--c-CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 63 IDKILLKSWAPQRD---ILDHPNVKVFIS--H-GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 63 ~~nv~~~~~~pq~~---lL~h~~~~l~It--h-gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
.++|.+.+++|+.+ ++ ..+++++. . .| ..++.||+++|+|+|+.... .....+.+...|..++..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l--~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv~~~-- 351 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALL--QVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLVDFF-- 351 (396)
T ss_pred cceEEEeCCCCHHHHHHHH--HhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEcCCC--
Confidence 46899999998765 45 45677664 2 22 35899999999999997542 344555555678888655
Q ss_pred CHHHHHHHHHHHhCChhHHHHHHHHHHHHh
Q psy16503 136 TEETVLVALRTVLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 136 ~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~ 165 (244)
+.+++.++|.++++|++.+.++.+.+....
T Consensus 352 d~~~la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 352 DPDALAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 589999999999999887777666665443
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00014 Score=63.29 Aligned_cols=95 Identities=22% Similarity=0.343 Sum_probs=69.3
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEe----------cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCcee
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFIS----------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 128 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~It----------hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~ 128 (244)
.++|+.+.+++|+. +++ .++++++. -|..+++.||+++|+|+|+.+..+ ....+.+...|.
T Consensus 234 ~~~~v~~~g~~~~~~l~~~~--~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~ 307 (355)
T cd03799 234 LEDRVTLLGAKSQEEVRELL--RAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGL 307 (355)
T ss_pred CCCeEEECCcCChHHHHHHH--HhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceE
Confidence 46789999999755 355 56777777 344689999999999999976532 223444444888
Q ss_pred ecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 129 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 129 ~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
.++.+ +.+++.++|.++++|+....++.+.++..
T Consensus 308 ~~~~~--~~~~l~~~i~~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 308 LVPPG--DPEALADAIERLLDDPELRREMGEAGRAR 341 (355)
T ss_pred EeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 88654 68999999999999987666666555443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00041 Score=61.52 Aligned_cols=153 Identities=18% Similarity=0.207 Sum_probs=93.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCCC--------------CCCCCCEEEe-ccCChh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENM--------------SGKIDKILLK-SWAPQR-- 75 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~~--------------~~~~~nv~~~-~~~pq~-- 75 (244)
++.+++..|.... .+-...+++++..++ .++++..++... .....++.+. .++|..
T Consensus 200 ~~~~i~~~Grl~~-----~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 200 SRPYILFVGRITR-----QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred CceEEEEEccccc-----ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 3456667777743 233555666666653 355544333110 1112346554 567654
Q ss_pred -hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCC----HHHHHHHHHH
Q psy16503 76 -DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT----EETVLVALRT 146 (244)
Q Consensus 76 -~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~----~~~l~~ai~~ 146 (244)
+++ ..+|+++.- |...++.||+++|+|+|+.... .....+.+.+.|..++.++.+ .+++.++|.+
T Consensus 275 ~~~~--~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~ 348 (388)
T TIGR02149 275 VELL--SNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINI 348 (388)
T ss_pred HHHH--HhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHH
Confidence 456 678888863 3346789999999999997653 344556666779998765432 2889999999
Q ss_pred HhCChhHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy16503 147 VLGNPSYKKRAEKVARLFQDRPMPPLDTAIYW 178 (244)
Q Consensus 147 ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ 178 (244)
+++|+.-++++.+.+.....+..+....+..+
T Consensus 349 l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 380 (388)
T TIGR02149 349 LLADPELAKKMGIAGRKRAEEEFSWGSIAKKT 380 (388)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99998877776666554433224433333333
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00015 Score=62.91 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=67.5
Q ss_pred CCCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCC--cchhhHHHHHHHcCceeecC
Q psy16503 61 GKIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMF--GDQKANIRVVEKAGFGVTLP 131 (244)
Q Consensus 61 ~~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~--~dQ~~na~~~~~~G~g~~l~ 131 (244)
..++++.+.+++|+. +++ ..+|+++.- |..+++.||+++|+|+|+.... .|.. . ..|..+.
T Consensus 250 ~~~~~v~~~g~~~~~~~~~~~--~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~------~--~~~~~~~ 319 (365)
T cd03809 250 GLGDRVRFLGYVSDEELAALY--RGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVA------G--DAALYFD 319 (365)
T ss_pred CCCCeEEECCCCChhHHHHHH--hhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCcccee------c--CceeeeC
Confidence 356799999999876 455 567776643 3456899999999999996542 2322 1 2355554
Q ss_pred CCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhC
Q psy16503 132 YDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 166 (244)
Q Consensus 132 ~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~ 166 (244)
.+ +.+++.++|.++++|+..+..+.+.+.....
T Consensus 320 ~~--~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 320 PL--DPEALAAAIERLLEDPALREELRERGLARAK 352 (365)
T ss_pred CC--CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 43 6899999999999999988888777765443
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.4e-05 Score=69.17 Aligned_cols=154 Identities=12% Similarity=0.103 Sum_probs=98.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC---eEEEEecCCC--CCC---CCCCEEEeccCChhhhhCCCCeeEE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---RVIWKWEGEN--MSG---KIDKILLKSWAPQRDILDHPNVKVF 86 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~---~viw~~~~~~--~~~---~~~nv~~~~~~pq~~lL~h~~~~l~ 86 (244)
+++|.+--||... --...+..++++...+.. .+++...... ... ....+.+.+ +..+++ ..+|+.
T Consensus 167 ~~~I~llPGSR~~---Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~~--~~~~~m--~~aDla 239 (347)
T PRK14089 167 EGTIAFMPGSRKS---EIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEISY--DTHKAL--LEAEFA 239 (347)
T ss_pred CCEEEEECCCCHH---HHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEec--cHHHHH--HhhhHH
Confidence 4688888888843 112445544566554432 2333222110 000 111233332 345677 789999
Q ss_pred EecCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHH---HcCceeec-------------CCCCCCHHHHHHHHHHHhC
Q psy16503 87 ISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVE---KAGFGVTL-------------PYDQITEETVLVALRTVLG 149 (244)
Q Consensus 87 IthgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~---~~G~g~~l-------------~~~~~~~~~l~~ai~~ll~ 149 (244)
|+..|..|+ |++..|+|+++. ..-.-|..||+++. ..|++-.+ ..+++|++.|.+++.+. .
T Consensus 240 l~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~~-~ 317 (347)
T PRK14089 240 FICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKEM-D 317 (347)
T ss_pred HhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHHH-H
Confidence 999999988 999999999884 34568999999999 56776665 34678999999999883 3
Q ss_pred ChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 150 NPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 150 ~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
..+.++...++.+.+. .++.++++.++.
T Consensus 318 ~~~~~~~~~~l~~~l~---~~a~~~~A~~i~ 345 (347)
T PRK14089 318 REKFFKKSKELREYLK---HGSAKNVAKILK 345 (347)
T ss_pred HHHHHHHHHHHHHHhc---CCHHHHHHHHHh
Confidence 3456666666666663 266777776654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00076 Score=60.75 Aligned_cols=142 Identities=17% Similarity=0.249 Sum_probs=87.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---C-CeEEEEecCCC----CC-----CCCCCEEEeccCChhh---hh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---P-QRVIWKWEGEN----MS-----GKIDKILLKSWAPQRD---IL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~-~~viw~~~~~~----~~-----~~~~nv~~~~~~pq~~---lL 78 (244)
++.+++..|+... .+-.+.+++++..+ + .+++. +|+.. +. ...+|+.+.+++|..+ ++
T Consensus 228 ~~~~i~~~G~l~~-----~kg~~~li~a~~~l~~~~~~~l~i-vG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~ 301 (412)
T PRK10307 228 GKKIVLYSGNIGE-----KQGLELVIDAARRLRDRPDLIFVI-CGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALL 301 (412)
T ss_pred CCEEEEEcCcccc-----ccCHHHHHHHHHHhccCCCeEEEE-ECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHH
Confidence 4567777888743 23344455555543 3 24443 44311 10 1124799999998654 56
Q ss_pred CCCCeeEEEe--c-CC-----hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 79 DHPNVKVFIS--H-GG-----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 79 ~h~~~~l~It--h-gG-----~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|+++. . ++ .+.+.|++++|+|+|+.+.-+.. ....+. +.|+.++.+ +.+++.++|.++++|
T Consensus 302 --~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~~--d~~~la~~i~~l~~~ 373 (412)
T PRK10307 302 --KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEPE--SVEALVAAIAALARQ 373 (412)
T ss_pred --HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCCC--CHHHHHHHHHHHHhC
Confidence 55666543 3 22 23478999999999998654321 112222 678888755 579999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCC
Q psy16503 151 PSYKKRAEKVARLFQDRPMP 170 (244)
Q Consensus 151 ~~y~~~a~~~s~~~~~~~~~ 170 (244)
+..++++.+.+.....+..+
T Consensus 374 ~~~~~~~~~~a~~~~~~~fs 393 (412)
T PRK10307 374 ALLRPKLGTVAREYAERTLD 393 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 88777777766654433344
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00019 Score=63.42 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=87.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC---------CCCCCCCEEEeccCChh-hhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN---------MSGKIDKILLKSWAPQR-DILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~---------~~~~~~nv~~~~~~pq~-~lL~h~~~ 83 (244)
++..++..|..... ......++.+.....+.+. ++.+.-.+.. ..+.+.++.+.++.++. +++ ..+
T Consensus 203 ~~~~i~~vgrl~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 279 (372)
T cd04949 203 KPHKIITVARLAPE-KQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVY--QKA 279 (372)
T ss_pred CCCeEEEEEccCcc-cCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHH--hhh
Confidence 34566777776432 2223334333333333343 5544322211 12346688888876655 456 556
Q ss_pred eEEEe--c--CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 84 KVFIS--H--GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 84 ~l~It--h--gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
+++|. + |...++.||+++|+|+|+...-. .....+.+...|..++.. +.+++.++|.++++|++..+.+.+
T Consensus 280 d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~~--d~~~la~~i~~ll~~~~~~~~~~~ 354 (372)
T cd04949 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPKG--DIEALAEAIIELLNDPKLLQKFSE 354 (372)
T ss_pred hEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCCC--cHHHHHHHHHHHHcCHHHHHHHHH
Confidence 66664 3 44679999999999999975421 133455566788888654 589999999999999876666665
Q ss_pred HHHHH
Q psy16503 160 VARLF 164 (244)
Q Consensus 160 ~s~~~ 164 (244)
.+...
T Consensus 355 ~a~~~ 359 (372)
T cd04949 355 AAYEN 359 (372)
T ss_pred HHHHH
Confidence 55444
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0013 Score=58.26 Aligned_cols=155 Identities=18% Similarity=0.192 Sum_probs=92.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC--------------CCCCCCCEEEeccC--Chh--
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN--------------MSGKIDKILLKSWA--PQR-- 75 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~--------------~~~~~~nv~~~~~~--pq~-- 75 (244)
+..+++..|.....+. ...+++.+.......+. ++++.-++.. ..+..+++.+..+. +..
T Consensus 189 ~~~~i~~vgrl~~~Kg-~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 267 (372)
T cd03792 189 ERPYITQVSRFDPWKD-PFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEV 267 (372)
T ss_pred CCcEEEEEeccccccC-cHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHH
Confidence 4567777888754222 23333333332222233 5554333211 11234578888776 433
Q ss_pred -hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 76 -DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 76 -~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+++ ..+|+|+.- |-..++.||+++|+|+|+.+..+ ....+.+.+.|...+ +.+.+..+|.+++.|
T Consensus 268 ~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~----~~~~~a~~i~~ll~~ 337 (372)
T cd03792 268 NALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD----TVEEAAVRILYLLRD 337 (372)
T ss_pred HHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC----CcHHHHHHHHHHHcC
Confidence 455 678898864 32469999999999999976432 223455556677664 356788899999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 151 PSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 151 ~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
++.++.+.+.+.....+..+-...+..|++
T Consensus 338 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 367 (372)
T cd03792 338 PELRRKMGANAREHVRENFLITRHLKDYLY 367 (372)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 888887777766643323454444444443
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00022 Score=60.91 Aligned_cols=131 Identities=18% Similarity=0.313 Sum_probs=84.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-----CeEEEEecCCC----------CCCCCCCEEEeccCChh-hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN----------MSGKIDKILLKSWAPQR-DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-----~~viw~~~~~~----------~~~~~~nv~~~~~~pq~-~lL 78 (244)
++.+++..|+... .+-...+++++..+. .++++ +|... ..+..+++.+.++.+.. +++
T Consensus 188 ~~~~i~~~g~~~~-----~k~~~~~i~~~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (353)
T cd03811 188 DGPVILAVGRLSP-----QKGFDTLIRAFALLRKEGPDARLVI-LGDGPLREELEALAKELGLADRVHFLGFQSNPYPYL 261 (353)
T ss_pred CceEEEEEecchh-----hcChHHHHHHHHHhhhcCCCceEEE-EcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHH
Confidence 4677888888743 222334444444432 24444 34311 11346789999987654 566
Q ss_pred CCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHH---HHHHHHHhCCh
Q psy16503 79 DHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV---LVALRTVLGNP 151 (244)
Q Consensus 79 ~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l---~~ai~~ll~~~ 151 (244)
..++++|.- |..+++.||+++|+|+|+.... .....+.+.+.|...+.+ +.+.+ .+++.++..++
T Consensus 262 --~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~ 333 (353)
T cd03811 262 --KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVPVG--DEAALAAAALALLDLLLDP 333 (353)
T ss_pred --HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEECCC--CHHHHHHHHHHHHhccCCh
Confidence 567887742 4467899999999999986543 445677777889988765 45666 67777777777
Q ss_pred hHHHHHHH
Q psy16503 152 SYKKRAEK 159 (244)
Q Consensus 152 ~y~~~a~~ 159 (244)
+.++++.+
T Consensus 334 ~~~~~~~~ 341 (353)
T cd03811 334 ELRERLAA 341 (353)
T ss_pred HHHHHHHH
Confidence 66666655
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00052 Score=60.96 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=68.6
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
..++|.+.+++|.. +++ ..+++++.. |-..++.||+++|+|+|+.-..+ ....+.+.+.|...+.
T Consensus 278 l~~~V~f~g~~~~~~~~~~l--~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~~-- 349 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLL--SSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCEP-- 349 (392)
T ss_pred CCceEEEeCCCChHHHHHHH--hhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeCC--
Confidence 45789999999876 456 677887742 22468899999999999974432 3344555567887753
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
+.+++.++|.++++|++.++++.+.+...
T Consensus 350 -~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 350 -TPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred -CHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 68999999999999987776666655443
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00056 Score=62.41 Aligned_cols=97 Identities=16% Similarity=0.105 Sum_probs=68.7
Q ss_pred CCCCEEEeccCChhhh---hCCC--CeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 62 KIDKILLKSWAPQRDI---LDHP--NVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~l---L~h~--~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
..++|.+.+++++.++ +... .+|+|+.. |-..++.||+++|+|+|+...-+ ....+.+...|..++.
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~ 390 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDV 390 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCC
Confidence 3567888888776654 4211 23788763 33469999999999999986533 3444555567888876
Q ss_pred CCCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 133 DQITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 133 ~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
. +.+++.++|.++++|+..++++.+.+...
T Consensus 391 ~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 420 (439)
T TIGR02472 391 L--DLEAIASALEDALSDSSQWQLWSRNGIEG 420 (439)
T ss_pred C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 5 57899999999999988777766665543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00082 Score=61.98 Aligned_cols=141 Identities=18% Similarity=0.260 Sum_probs=88.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-CC-------------CCCCCCEEEeccCChhhhhCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-NM-------------SGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~~-------------~~~~~nv~~~~~~pq~~lL~h 80 (244)
++.+++..|.....+. ...+++.+....+..+.--++.+|+. +. .+..+||.+.+...-.+++
T Consensus 292 ~~~~i~~vGrl~~~Kg-~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l-- 368 (475)
T cd03813 292 EPPVVGLIGRVVPIKD-IKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYL-- 368 (475)
T ss_pred CCcEEEEEeccccccC-HHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHH--
Confidence 4567777788754221 22333333222233343224445532 10 1245789998865566777
Q ss_pred CCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc------CceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA------GFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~------G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+.+++++.- |-.+++.||+++|+|+|+-... .....+.+. ..|..++.. +.+++.++|.++++|
T Consensus 369 ~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~~--d~~~la~ai~~ll~~ 442 (475)
T cd03813 369 PKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPPA--DPEALARAILRLLKD 442 (475)
T ss_pred HhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECCC--CHHHHHHHHHHHhcC
Confidence 678887753 4457999999999999996442 233344442 268887654 589999999999999
Q ss_pred hhHHHHHHHHHHHH
Q psy16503 151 PSYKKRAEKVARLF 164 (244)
Q Consensus 151 ~~y~~~a~~~s~~~ 164 (244)
+..++++.+.+...
T Consensus 443 ~~~~~~~~~~a~~~ 456 (475)
T cd03813 443 PELRRAMGEAGRKR 456 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777776666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00027 Score=61.66 Aligned_cols=139 Identities=15% Similarity=0.138 Sum_probs=85.3
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc-CCC-eEEEEecCCC---------CCCCCCCEEEeccCCh-hhhhCCC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ-IPQ-RVIWKWEGEN---------MSGKIDKILLKSWAPQ-RDILDHP 81 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~-~~~-~viw~~~~~~---------~~~~~~nv~~~~~~pq-~~lL~h~ 81 (244)
+++.+++..|+...... .+.+-..+..+.+ .+. ++++.-++.. ..+.++++.+.++..+ .+++ .
T Consensus 190 ~~~~~i~~vGr~~~~Kg--~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~ 265 (358)
T cd03812 190 EDKFVIGHVGRFSEQKN--HEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELL--Q 265 (358)
T ss_pred CCCEEEEEEeccccccC--hHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHH--H
Confidence 35677888888743221 2222222222222 222 4444322221 1235678999988544 3566 6
Q ss_pred CeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 82 NVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 82 ~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
.+++++.- |-.+++.||+++|+|+|+....+. ...+.+ +.|.....+ +.+++.++|.++++|+..++++
T Consensus 266 ~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~~-~~~~~~~~~--~~~~~a~~i~~l~~~~~~~~~~ 338 (358)
T cd03812 266 AMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLTD-LVKFLSLDE--SPEIWAEEILKLKSEDRRERSS 338 (358)
T ss_pred hcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhcc-CccEEeCCC--CHHHHHHHHHHHHhCcchhhhh
Confidence 78888763 456899999999999999765442 223334 555555433 4799999999999999888777
Q ss_pred HHHHHH
Q psy16503 158 EKVARL 163 (244)
Q Consensus 158 ~~~s~~ 163 (244)
...+..
T Consensus 339 ~~~~~~ 344 (358)
T cd03812 339 ESIKKK 344 (358)
T ss_pred hhhhhc
Confidence 665443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0014 Score=57.10 Aligned_cols=96 Identities=19% Similarity=0.161 Sum_probs=66.5
Q ss_pred CCCCEEEeccCChh-hhhCCCCeeEEEecC-----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 62 KIDKILLKSWAPQR-DILDHPNVKVFISHG-----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 62 ~~~nv~~~~~~pq~-~lL~h~~~~l~Ithg-----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
..+++.+.++.+.. +++ ..+++++.-. ..+++.||+++|+|+|+....+ ....+.+.+.|..++.+
T Consensus 244 ~~~~v~~~g~~~~~~~~l--~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~~~~~-- 315 (355)
T cd03819 244 LQDRVTFVGHCSDMPAAY--ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLLVPPG-- 315 (355)
T ss_pred CcceEEEcCCcccHHHHH--HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEEeCCC--
Confidence 45689999986543 566 6678777532 3469999999999999875432 34455555678888654
Q ss_pred CHHHHHHHHHHHh-CChhHHHHHHHHHHHHh
Q psy16503 136 TEETVLVALRTVL-GNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 136 ~~~~l~~ai~~ll-~~~~y~~~a~~~s~~~~ 165 (244)
+.+++.++|..++ .++..+.++.+.+....
T Consensus 316 ~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 316 DAEALAQALDQILSLLPEGRAKMFAKARMCV 346 (355)
T ss_pred CHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 6889999996555 46666666666555443
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00046 Score=62.51 Aligned_cols=93 Identities=17% Similarity=0.271 Sum_probs=67.8
Q ss_pred CCEEEe-ccCChhh---hhCCCCeeEEEe-c------CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 64 DKILLK-SWAPQRD---ILDHPNVKVFIS-H------GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 64 ~nv~~~-~~~pq~~---lL~h~~~~l~It-h------gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
+|+.+. +|+|..+ ++ ..+|+++. + |-.+++.||+++|+|+|+.... .....+++.+.|..++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l--~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLL--ASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHH--HhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC-
Confidence 466655 5887554 46 67888874 1 1245799999999999996542 4456666777898873
Q ss_pred CCCCHHHHHHHHHHHhCC---hhHHHHHHHHHHHHhC
Q psy16503 133 DQITEETVLVALRTVLGN---PSYKKRAEKVARLFQD 166 (244)
Q Consensus 133 ~~~~~~~l~~ai~~ll~~---~~y~~~a~~~s~~~~~ 166 (244)
+.+++.++|.++++| +..++++.+.++....
T Consensus 367 ---d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 367 ---DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred ---CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 689999999999998 7777777776666553
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=97.83 E-value=4e-05 Score=67.87 Aligned_cols=158 Identities=15% Similarity=0.234 Sum_probs=88.0
Q ss_pred HHHhcCCCceEEEEcCCCCCCC-CCCHHHHHHHHHHHhcC-CCeEEEEecCC---------CCCCCCCCEEEeccCChh-
Q psy16503 8 KFLDESVNGVIYFSMGSIIQGK-SFPSDKRKAFLRAFEQI-PQRVIWKWEGE---------NMSGKIDKILLKSWAPQR- 75 (244)
Q Consensus 8 ~~l~~~~~~vI~vs~Gs~~~~~-~~~~~~~~~i~~al~~~-~~~viw~~~~~---------~~~~~~~nv~~~~~~pq~- 75 (244)
.++...+++.+++++=...... ....+.+..+++++.+. +..++|.+.+. .+... +|+.+.+.++..
T Consensus 173 ~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 173 GILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEE 251 (346)
T ss_dssp HHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHH
T ss_pred HHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHH
Confidence 3333456789999993332211 11134455556666555 45899998842 12334 499999877654
Q ss_pred --hhhCCCCeeEEEecCChhhHH-HHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 76 --DILDHPNVKVFISHGGFLGTT-EALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 76 --~lL~h~~~~l~IthgG~~s~~-Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
.+| .+++++||..| ++. ||.+.|+|+|.+=-.++.+ .....|..+.+. .+.+++.++++++++++.
T Consensus 252 ~l~ll--~~a~~vvgdSs--GI~eEa~~lg~P~v~iR~~geRq----e~r~~~~nvlv~---~~~~~I~~ai~~~l~~~~ 320 (346)
T PF02350_consen 252 YLSLL--KNADLVVGDSS--GIQEEAPSLGKPVVNIRDSGERQ----EGRERGSNVLVG---TDPEAIIQAIEKALSDKD 320 (346)
T ss_dssp HHHHH--HHESEEEESSH--HHHHHGGGGT--EEECSSS-S-H----HHHHTTSEEEET---SSHHHHHHHHHHHHH-HH
T ss_pred HHHHH--hcceEEEEcCc--cHHHHHHHhCCeEEEecCCCCCH----HHHhhcceEEeC---CCHHHHHHHHHHHHhChH
Confidence 566 67999999998 566 9999999999992222221 223456666654 478999999999998755
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHH
Q psy16503 153 YKKRAEKVARLFQDRPMPPLDTAIYWI 179 (244)
Q Consensus 153 y~~~a~~~s~~~~~~~~~~~~~a~~~i 179 (244)
+..++.....-+.+ ..+.+++++.+
T Consensus 321 ~~~~~~~~~npYgd--G~as~rI~~~L 345 (346)
T PF02350_consen 321 FYRKLKNRPNPYGD--GNASERIVEIL 345 (346)
T ss_dssp HHHHHHCS--TT-S--S-HHHHHHHHH
T ss_pred HHHhhccCCCCCCC--CcHHHHHHHhh
Confidence 55555543334444 34555555543
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0006 Score=61.17 Aligned_cols=110 Identities=13% Similarity=0.164 Sum_probs=74.0
Q ss_pred CCCEEEeccCChh-hhhCCCCeeEEE--ec--CCh-hhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCC
Q psy16503 63 IDKILLKSWAPQR-DILDHPNVKVFI--SH--GGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136 (244)
Q Consensus 63 ~~nv~~~~~~pq~-~lL~h~~~~l~I--th--gG~-~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~ 136 (244)
.++|.+.+++++. ..+ ..++++| ++ .|. +.+.||+++|+|+|+.+...+.. ....|.|..+. + +
T Consensus 279 ~~~V~~~G~v~~~~~~~--~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~-~--~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYL--AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA-A--D 348 (397)
T ss_pred CCCeEEeeecCCHHHHH--HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC-C--C
Confidence 4689999998865 455 6788877 32 343 57999999999999987533221 12346677764 2 6
Q ss_pred HHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 137 EETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 137 ~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.+++.++|.++++|+..++++.+.+.....+..+ .+..+.-++.++
T Consensus 349 ~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fs-w~~~~~~~~~~l 394 (397)
T TIGR03087 349 PADFAAAILALLANPAEREELGQAARRRVLQHYH-WPRNLARLDALL 394 (397)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHh
Confidence 8999999999999988777776666554322233 444444444444
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00059 Score=60.39 Aligned_cols=138 Identities=16% Similarity=0.231 Sum_probs=84.9
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCC---------CCCCCCCEEEeccCCh--h---hhhC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGEN---------MSGKIDKILLKSWAPQ--R---DILD 79 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~---------~~~~~~nv~~~~~~pq--~---~lL~ 79 (244)
+.+++..|..... +.+-...+++++.... .+++..-++.. ..+.+++|.+.+|.++ . +.+
T Consensus 180 ~~~i~~~Grl~~~---~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~- 255 (359)
T PRK09922 180 PAVFLYVGRLKFE---GQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKI- 255 (359)
T ss_pred CcEEEEEEEEecc---cCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHH-
Confidence 5667777776321 1122445666665553 34444322321 1135678999999753 2 233
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecC-CCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH-
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIP-MFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY- 153 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP-~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y- 153 (244)
..+++++.. |-..++.||+++|+|+|+.. ..+ ....+.+...|..++.. +.+++.++|.++++|++.
T Consensus 256 -~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~~--d~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 256 -KNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTPG--NIDEFVGKLNKVISGEVKY 328 (359)
T ss_pred -hcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECCC--CHHHHHHHHHHHHhCcccC
Confidence 457777753 43689999999999999985 432 22344455568887654 689999999999998863
Q ss_pred -HHHHHHHHHHH
Q psy16503 154 -KKRAEKVARLF 164 (244)
Q Consensus 154 -~~~a~~~s~~~ 164 (244)
...+.+..+.+
T Consensus 329 ~~~~~~~~~~~~ 340 (359)
T PRK09922 329 QHDAIPNSIERF 340 (359)
T ss_pred CHHHHHHHHHHh
Confidence 33334433333
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0038 Score=58.05 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=92.7
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----C------CCCCCCEEEeccCChhhhhCCCCeeE
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----M------SGKIDKILLKSWAPQRDILDHPNVKV 85 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~------~~~~~nv~~~~~~pq~~lL~h~~~~l 85 (244)
+..++..|..... .-...+++++....++.|.--+..+|... + .+..++|.+.++.+..+++ ..+++
T Consensus 319 ~~~il~vGrl~~~-Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~--~~adv 395 (500)
T TIGR02918 319 PFSIITASRLAKE-KHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVY--KDYEL 395 (500)
T ss_pred CeEEEEEeccccc-cCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHH--HhCCE
Confidence 4567777877432 22233334333333344432233344311 1 1235678999988877888 56777
Q ss_pred EEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC--CCC----HHHHHHHHHHHhCChhHHH
Q psy16503 86 FISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD--QIT----EETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 86 ~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~--~~~----~~~l~~ai~~ll~~~~y~~ 155 (244)
++.- |-..++.||+++|+|+|+....+ .+...+++...|..++.. .-+ .+.+.++|.+++++ ..++
T Consensus 396 ~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~-~~~~ 471 (500)
T TIGR02918 396 YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNS-NDID 471 (500)
T ss_pred EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhCh-HHHH
Confidence 7752 33579999999999999976421 133445555568877632 112 67899999999954 4455
Q ss_pred HHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 156 RAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 156 ~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
++.+.+..... ..+....+..|.+.
T Consensus 472 ~~~~~a~~~a~-~fs~~~v~~~w~~l 496 (500)
T TIGR02918 472 AFHEYSYQIAE-GFLTANIIEKWKKL 496 (500)
T ss_pred HHHHHHHHHHH-hcCHHHHHHHHHHH
Confidence 55555554433 24545555556553
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0012 Score=57.65 Aligned_cols=130 Identities=15% Similarity=0.219 Sum_probs=79.0
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCC-C----------CCCCCCCEEEeccCChhh---hhCCC
Q psy16503 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGE-N----------MSGKIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 18 I~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~-~----------~~~~~~nv~~~~~~pq~~---lL~h~ 81 (244)
.++..|+... .+-...+++++..++ .++++ +|+. . .....++|.+.+++|+.+ .+ .
T Consensus 195 ~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~l~i-vG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~--~ 266 (363)
T cd04955 195 YYLLVGRIVP-----ENNIDDLIEAFSKSNSGKKLVI-VGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELL--R 266 (363)
T ss_pred EEEEEecccc-----cCCHHHHHHHHHhhccCceEEE-EcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHH--H
Confidence 4556788743 223445666666554 35444 3431 1 123467899999998764 44 4
Q ss_pred CeeEEEecCC-----hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 82 NVKVFISHGG-----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 82 ~~~l~IthgG-----~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
.+++++.+.- .+++.||+++|+|+|+....+. ...+.. .|...+.. +.+.++|.++++|++.+.+
T Consensus 267 ~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~~----~~l~~~i~~l~~~~~~~~~ 336 (363)
T cd04955 267 YAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKVG----DDLASLLEELEADPEEVSA 336 (363)
T ss_pred hCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecCc----hHHHHHHHHHHhCHHHHHH
Confidence 5667666432 3679999999999999754321 111122 34444432 2299999999999876666
Q ss_pred HHHHHHHHh
Q psy16503 157 AEKVARLFQ 165 (244)
Q Consensus 157 a~~~s~~~~ 165 (244)
+.+.+....
T Consensus 337 ~~~~~~~~~ 345 (363)
T cd04955 337 MAKAARERI 345 (363)
T ss_pred HHHHHHHHH
Confidence 666555443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0023 Score=57.08 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=81.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC---------C---CCCCCEEEeccCChh---hhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM---------S---GKIDKILLKSWAPQR---DILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~---------~---~~~~nv~~~~~~pq~---~lL~ 79 (244)
++.++|++-........+.+.+..+++++......+++.++.... . ...+|+.+.+.++.. .++
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll- 279 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL- 279 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH-
Confidence 478888885432122344677899999998776555555432110 0 014689998876644 466
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..++++||..+.+. .||.+.|+|+|.+- +-+ ...+.|..+. +. .+.++|.+++++++ +++++++
T Consensus 280 -~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~~g~nvl~vg---~~~~~I~~a~~~~~-~~~~~~~ 344 (365)
T TIGR03568 280 -KNADAVIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRLRADSVIDVD---PDKEEIVKAIEKLL-DPAFKKS 344 (365)
T ss_pred -HhCCEEEEcChhHH-HhhhhcCCCEEeec---CCc----hhhhhcCeEEEeC---CCHHHHHHHHHHHh-ChHHHHH
Confidence 67999999875544 99999999999773 211 1123344433 43 36899999999965 5444443
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0029 Score=61.01 Aligned_cols=139 Identities=23% Similarity=0.221 Sum_probs=86.1
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----C------CCCCCCEEEeccCChh-hhhCCCCee
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----M------SGKIDKILLKSWAPQR-DILDHPNVK 84 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~------~~~~~nv~~~~~~pq~-~lL~h~~~~ 84 (244)
..++...|.....+ -...+++.+.....+.+.--++.+|+.. + .+..++|.+.+|.++. .++ ..++
T Consensus 517 ~~vIg~VGRL~~~K-G~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll--~aaD 593 (694)
T PRK15179 517 RFTVGTVMRVDDNK-RPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWL--TQFN 593 (694)
T ss_pred CeEEEEEEeCCccC-CHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHH--HhcC
Confidence 45666677764322 2234444444444444542344455421 1 1345789999997754 455 6778
Q ss_pred EEEe---cCC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh----CChhHHHH
Q psy16503 85 VFIS---HGG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL----GNPSYKKR 156 (244)
Q Consensus 85 l~It---hgG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll----~~~~y~~~ 156 (244)
+|+. +.| .+++.||+++|+|+|+...-+ ....+.+...|..++.++.+.+++.+++.+++ .++..+++
T Consensus 594 v~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ 669 (694)
T PRK15179 594 AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARK 669 (694)
T ss_pred EEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHH
Confidence 8775 444 589999999999999986532 34455555679999877766666666666655 45666666
Q ss_pred HHHHH
Q psy16503 157 AEKVA 161 (244)
Q Consensus 157 a~~~s 161 (244)
+++..
T Consensus 670 ar~~a 674 (694)
T PRK15179 670 AADWA 674 (694)
T ss_pred HHHHH
Confidence 65544
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0048 Score=61.51 Aligned_cols=166 Identities=12% Similarity=0.142 Sum_probs=100.1
Q ss_pred HHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-----CeEEEEecC-CC---C----------------
Q psy16503 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEG-EN---M---------------- 59 (244)
Q Consensus 5 ~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-----~~viw~~~~-~~---~---------------- 59 (244)
++..|+...+ +.++++.|.... .+-...+++|+..++ ..+.+..++ +. +
T Consensus 469 ~l~r~~~~pd-kpvIL~VGRL~p-----~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~ 542 (1050)
T TIGR02468 469 EIMRFFTNPR-KPMILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLID 542 (1050)
T ss_pred HHHhhcccCC-CcEEEEEcCCcc-----ccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHH
Confidence 4555665433 456677788743 333555666665442 133333443 11 1
Q ss_pred -CCCCCCEEEeccCChhh---hhCC--CCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceee
Q psy16503 60 -SGKIDKILLKSWAPQRD---ILDH--PNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT 129 (244)
Q Consensus 60 -~~~~~nv~~~~~~pq~~---lL~h--~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~ 129 (244)
.+..++|.+.+++|+.+ ++.. ...++|+.- |=..++.||+++|+|+|+-...+ ....+.....|+.
T Consensus 543 ~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGlL 618 (1050)
T TIGR02468 543 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGLL 618 (1050)
T ss_pred HhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEEE
Confidence 12356788888887664 3421 123577764 33479999999999999986543 2233334456888
Q ss_pred cCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 130 LPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 130 l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
+++. +.+.|.++|.++++|+..++++.+.+.....+ ++-...+..+.+.+.
T Consensus 619 VdP~--D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~~-FSWe~ia~~yl~~i~ 669 (1050)
T TIGR02468 619 VDPH--DQQAIADALLKLVADKQLWAECRQNGLKNIHL-FSWPEHCKTYLSRIA 669 (1050)
T ss_pred ECCC--CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHH
Confidence 8765 58899999999999988777777665544332 444444444444443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.008 Score=53.92 Aligned_cols=126 Identities=14% Similarity=0.178 Sum_probs=73.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC---------CCCCCCCEEEeccCChh---hhhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN---------MSGKIDKILLKSWAPQR---DILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~---------~~~~~~nv~~~~~~pq~---~lL~h~ 81 (244)
++.+++..|.....+. ...+++.+....+..+. ++++.-++.. ..+..+++.+.+|+|+. +++ +
T Consensus 192 ~~~~i~~~grl~~~Kg-~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l--~ 268 (398)
T cd03796 192 DKITIVVISRLVYRKG-IDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVL--V 268 (398)
T ss_pred CceEEEEEeccchhcC-HHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHH--H
Confidence 4567778887743211 22222222221223343 4444332211 11245679999999865 356 6
Q ss_pred CeeEEEec---CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 82 NVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 82 ~~~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
.+|+++.- -| ..++.||+++|+|+|+-+..+- ...+. .|.+..... +.+++.+++.++++++
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~-~~~~~~~~~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLP-PDMILLAEP---DVESIVRKLEEAISIL 334 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhhee-CCceeecCC---CHHHHHHHHHHHHhCh
Confidence 78888753 23 2599999999999999876431 22332 344444332 6799999999999764
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0059 Score=52.62 Aligned_cols=122 Identities=16% Similarity=0.086 Sum_probs=77.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-------CCC---CCCCEEEeccCChhh---hhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------MSG---KIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-------~~~---~~~nv~~~~~~pq~~---lL~h~ 81 (244)
++..++..|..... +-...+++++++.+.++++.-++.. ... ..+++.+.+++++.+ ++ .
T Consensus 170 ~~~~i~~~Gr~~~~-----Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~--~ 242 (335)
T cd03802 170 KGDYLLFLGRISPE-----KGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELL--G 242 (335)
T ss_pred CCCEEEEEEeeccc-----cCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHH--H
Confidence 34556667777432 2244566777776666665433321 011 257899999998754 46 5
Q ss_pred CeeEEEe----cCC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 82 NVKVFIS----HGG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 82 ~~~l~It----hgG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
.+++++. +-| ..++.||+++|+|+|+....+ ....+.+...|...+. .+++.++|.++...+
T Consensus 243 ~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~~~ 309 (335)
T cd03802 243 NARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVDS----VEELAAAVARADRLD 309 (335)
T ss_pred hCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeCC----HHHHHHHHHHHhccH
Confidence 6677663 223 468999999999999886532 2233333346887753 899999999987543
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0034 Score=55.19 Aligned_cols=98 Identities=14% Similarity=0.266 Sum_probs=69.4
Q ss_pred CCCCCEEEeccCChhhhhCC--CCeeEEEec-------CC------hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcC
Q psy16503 61 GKIDKILLKSWAPQRDILDH--PNVKVFISH-------GG------FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG 125 (244)
Q Consensus 61 ~~~~nv~~~~~~pq~~lL~h--~~~~l~Ith-------gG------~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G 125 (244)
...+||.+.+|+|..++..+ ...-++... +. .+-+.|++++|+|+|+.+ ....+..+++.+
T Consensus 204 ~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~ 279 (333)
T PRK09814 204 ENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENG 279 (333)
T ss_pred ccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCC
Confidence 45679999999998765321 111122111 11 123778899999999854 456788899999
Q ss_pred ceeecCCCCCCHHHHHHHHHHHhCC--hhHHHHHHHHHHHHhC
Q psy16503 126 FGVTLPYDQITEETVLVALRTVLGN--PSYKKRAEKVARLFQD 166 (244)
Q Consensus 126 ~g~~l~~~~~~~~~l~~ai~~ll~~--~~y~~~a~~~s~~~~~ 166 (244)
+|+.++ +.+++.+++.++..+ ..++++++++++.++.
T Consensus 280 ~G~~v~----~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 280 LGFVVD----SLEELPEIIDNITEEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred ceEEeC----CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc
Confidence 999997 567899999886432 2467888999988886
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.012 Score=51.79 Aligned_cols=161 Identities=17% Similarity=0.120 Sum_probs=93.2
Q ss_pred HHHHHhcCCCceEEEEcCCCCCCC-CCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCC--CCCEEEe-ccCChhhhhCCC
Q psy16503 6 IKKFLDESVNGVIYFSMGSIIQGK-SFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGK--IDKILLK-SWAPQRDILDHP 81 (244)
Q Consensus 6 l~~~l~~~~~~vI~vs~Gs~~~~~-~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~--~~nv~~~-~~~pq~~lL~h~ 81 (244)
+.+-+...+++.|++=+.+....- ......+..+++.+++.+..++......+.... .-++.+. .-++-.++| .
T Consensus 170 vl~~lg~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll--~ 247 (335)
T PF04007_consen 170 VLKELGLDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLL--Y 247 (335)
T ss_pred HHHHcCCCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHH--H
Confidence 333444334688888776643211 123466778888888877654443322221111 1123332 234555888 6
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
.++++|+-|| ....||...|+|.|-+ +.++-...-+.+.+.|+-.... +.+++.+.+.+.+ ..+++....
T Consensus 248 ~a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gll~~~~----~~~ei~~~v~~~~---~~~~~~~~~- 317 (335)
T PF04007_consen 248 YADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGLLYHST----DPDEIVEYVRKNL---GKRKKIREK- 317 (335)
T ss_pred hcCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCCeEecC----CHHHHHHHHHHhh---hcccchhhh-
Confidence 7999999988 5789999999999986 2233333446678888733332 5677777555544 333333321
Q ss_pred HHHhCCCCChHHHHHHHHHHHH
Q psy16503 162 RLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 162 ~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.. .++.+..++-||.++
T Consensus 318 ---~~--~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 318 ---KS--EDPTDLIIEEIEEYI 334 (335)
T ss_pred ---hc--cCHHHHHHHHHHHhh
Confidence 11 466777777777553
|
They are found in archaea and some bacteria and have no known function. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0098 Score=52.46 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=58.0
Q ss_pred CCCCCEEEec---cCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCC------Ccch------hhHH
Q psy16503 61 GKIDKILLKS---WAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPM------FGDQ------KANI 118 (244)
Q Consensus 61 ~~~~nv~~~~---~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~------~~dQ------~~na 118 (244)
..++++.+.. +.+.. +++ ..+|+|+.- |-..++.||+++|+|+|+--. .+++ ..++
T Consensus 198 ~l~~~V~f~g~~G~~~~~dl~~~y--~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v 275 (335)
T PHA01633 198 EVPANVHFVAEFGHNSREYIFAFY--GAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKV 275 (335)
T ss_pred CCCCcEEEEecCCCCCHHHHHHHH--HhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCH
Confidence 3567888874 44543 456 678888863 335689999999999998622 2332 3334
Q ss_pred HHHH--HcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 119 RVVE--KAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 119 ~~~~--~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
.... +.|.|..++ ..+++++.++|.+++..
T Consensus 276 ~~~~~~~~g~g~~~~--~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 276 EEYYDKEHGQKWKIH--KFQIEDMANAIILAFEL 307 (335)
T ss_pred HHhcCcccCceeeec--CCCHHHHHHHHHHHHhc
Confidence 3333 356777765 45799999999999543
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.027 Score=52.27 Aligned_cols=127 Identities=18% Similarity=0.315 Sum_probs=89.9
Q ss_pred cCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC--CC-----------CCC-CCCCEEEeccCChhhh
Q psy16503 12 ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG--EN-----------MSG-KIDKILLKSWAPQRDI 77 (244)
Q Consensus 12 ~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~--~~-----------~~~-~~~nv~~~~~~pq~~l 77 (244)
-.++.+||+||+...+ ...+.+....+.++..|..++|..++ +. ..+ .+..+++.+-.|..+.
T Consensus 426 lp~~avVf~c~~n~~K---~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 426 LPEDAVVFCCFNNYFK---ITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCCeEEEEecCCccc---CCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 3457899999999865 67899999999999999999998876 21 011 3557788777765543
Q ss_pred h-CCCCeeEEEe---cCChhhHHHHHHhCCcEEecCCCcchhh--HHHHH-HHcCceeecCCCCCCHHHHHHHHH
Q psy16503 78 L-DHPNVKVFIS---HGGFLGTTEALYSGVPIIGIPMFGDQKA--NIRVV-EKAGFGVTLPYDQITEETVLVALR 145 (244)
Q Consensus 78 L-~h~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~~dQ~~--na~~~-~~~G~g~~l~~~~~~~~~l~~ai~ 145 (244)
+ .+.-+|+|+. -||..|..|++..||||+.. .|+|+. |+..+ ...|+-..+-.+ ..+-+..++.
T Consensus 503 ~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~agi~e~vA~s--~~dYV~~av~ 573 (620)
T COG3914 503 RARYGIADLVLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATNAGIPELVADS--RADYVEKAVA 573 (620)
T ss_pred HHhhchhheeeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHhcCCchhhcCC--HHHHHHHHHH
Confidence 3 2467889887 59999999999999999998 677775 33333 344665554322 2344555553
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.034 Score=48.99 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=61.4
Q ss_pred CChhh---hhCCCCeeEEEe--c--CChhhHHHHHHhCCcEEecCCCc--chhhH---HHHHH-----------HcCcee
Q psy16503 72 APQRD---ILDHPNVKVFIS--H--GGFLGTTEALYSGVPIIGIPMFG--DQKAN---IRVVE-----------KAGFGV 128 (244)
Q Consensus 72 ~pq~~---lL~h~~~~l~It--h--gG~~s~~Eal~~gvP~i~vP~~~--dQ~~n---a~~~~-----------~~G~g~ 128 (244)
+|..+ ++ ..+|+|+. + |...++.||+++|+|+|+....+ |...+ ...+. -.++|.
T Consensus 198 v~~~~l~~~y--~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 198 LPDDDIYSLF--AGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred CCHHHHHHHH--HhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 66543 46 67888874 2 32578999999999999976432 32211 11010 023566
Q ss_pred ecCCCCCCHHHHHHHHHHHhCC---hhHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 129 TLPYDQITEETVLVALRTVLGN---PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 129 ~l~~~~~~~~~l~~ai~~ll~~---~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.++. +.+++.+++.+++.| +.+++.+.+.++...++ .+ .+..++-.+.++
T Consensus 276 ~v~~---~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~-fs-~~~ia~k~~~l~ 328 (331)
T PHA01630 276 FLDP---DIEDAYQKLLEALANWTPEKKKENLEGRAILYREN-YS-YNAIAKMWEKIL 328 (331)
T ss_pred ccCC---CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh-CC-HHHHHHHHHHHH
Confidence 5544 467788888888876 45666666655555432 33 444444444443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.007 Score=53.93 Aligned_cols=75 Identities=15% Similarity=0.280 Sum_probs=54.8
Q ss_pred CCEEEec-cCChhhh---hCCCCeeEEEe-c-----CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 64 DKILLKS-WAPQRDI---LDHPNVKVFIS-H-----GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 64 ~nv~~~~-~~pq~~l---L~h~~~~l~It-h-----gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
+|+.+.. |+|..++ + ..+|+++. + -| .+++.||+++|+|+|+...- .+.+.+.+.+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l--~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g~~G~lv~- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLL--GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDGKNGLLFS- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHH--HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCCCCeEEEC-
Confidence 4577665 6887654 6 78899884 1 12 46899999999999997542 2556666677899885
Q ss_pred CCCCHHHHHHHHHHHh
Q psy16503 133 DQITEETVLVALRTVL 148 (244)
Q Consensus 133 ~~~~~~~l~~ai~~ll 148 (244)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 4788999998874
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0074 Score=42.42 Aligned_cols=82 Identities=21% Similarity=0.164 Sum_probs=56.4
Q ss_pred cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcC-ceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG-FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 167 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~ 167 (244)
+|-..-+.|++++|+|+|.-+- ..... +-..| -++..+ +.+++.+++..+++|+..++++.+-+...-.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~-~~~~~~~~~~~~----~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~ 79 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLRE-IFEDGEHIITYN----DPEELAEKIEYLLENPEERRRIAKNARERVLK 79 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHH-HcCCCCeEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 4556789999999999999854 22222 23334 445543 78999999999999998887777776555443
Q ss_pred CCChHHHHHHHH
Q psy16503 168 PMPPLDTAIYWI 179 (244)
Q Consensus 168 ~~~~~~~a~~~i 179 (244)
..+-..++..++
T Consensus 80 ~~t~~~~~~~il 91 (92)
T PF13524_consen 80 RHTWEHRAEQIL 91 (92)
T ss_pred hCCHHHHHHHHH
Confidence 355555555443
|
|
| >KOG4626|consensus | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0092 Score=55.83 Aligned_cols=139 Identities=14% Similarity=0.324 Sum_probs=93.2
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC------------CCCCCCCCEEEeccCChhh-----
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE------------NMSGKIDKILLKSWAPQRD----- 76 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~------------~~~~~~~nv~~~~~~pq~~----- 76 (244)
++.+||.+|--... +.++.++...+.|++.|..++|..... .+.-.|+.|.+.+-.+-.+
T Consensus 757 ~d~vvf~~FNqLyK---idP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred CCeEEEeechhhhc---CCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeeccccchHHHHHhh
Confidence 35688888877755 788999999999999999999986531 1222466777776554332
Q ss_pred hhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCc-chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 77 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 77 lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~-dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
.|++-..|-+.+. |..|-+|.++.||||+.+|.-. -...-+..+...|+|..+-+ +.++-.+.--++-.|..|.+
T Consensus 834 ~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak---~~eEY~~iaV~Latd~~~L~ 909 (966)
T KOG4626|consen 834 QLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK---NREEYVQIAVRLATDKEYLK 909 (966)
T ss_pred hhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh---hHHHHHHHHHHhhcCHHHHH
Confidence 3333334455565 5678899999999999999843 23344556677899987754 34444444444545766665
Q ss_pred HHHH
Q psy16503 156 RAEK 159 (244)
Q Consensus 156 ~a~~ 159 (244)
+++.
T Consensus 910 ~lr~ 913 (966)
T KOG4626|consen 910 KLRA 913 (966)
T ss_pred HHHH
Confidence 5554
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.017 Score=53.06 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=73.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--------C-CCCCCCEEEeccCChh---hhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--------M-SGKIDKILLKSWAPQR---DILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--------~-~~~~~nv~~~~~~pq~---~lL~h~~ 82 (244)
+..+++..|.....+ ..+.+-..++.+.+.+.++++.-+++. + ...+.|+.+..-.++. .++ ..
T Consensus 295 ~~~~i~~vGrl~~~K--g~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~ 370 (476)
T cd03791 295 DAPLFGFVGRLTEQK--GIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIY--AG 370 (476)
T ss_pred CCCEEEEEeeccccc--cHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH--Hh
Confidence 456777778775321 222222222333333345555433321 0 1125677765544433 345 67
Q ss_pred eeEEEec----CChhhHHHHHHhCCcEEecCCCc--chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 83 VKVFISH----GGFLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 83 ~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+|+++.- |-..+.+||+++|+|+|+....+ |...+.....+.|.|..++.. +.+++.++|.+++.
T Consensus 371 aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~--~~~~l~~~i~~~l~ 441 (476)
T cd03791 371 ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALA 441 (476)
T ss_pred CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC--CHHHHHHHHHHHHH
Confidence 8888853 22357899999999999865422 221111111134589988765 58899999999875
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0031 Score=47.28 Aligned_cols=78 Identities=22% Similarity=0.295 Sum_probs=47.8
Q ss_pred CCCEEEeccCChh-hhhCCCCeeEEEe--c---CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCC
Q psy16503 63 IDKILLKSWAPQR-DILDHPNVKVFIS--H---GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136 (244)
Q Consensus 63 ~~nv~~~~~~pq~-~lL~h~~~~l~It--h---gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~ 136 (244)
.+|+.+.+|++.. +++ .++++.+. . |-.+++.|++++|+|+|+.+. ......+..+.|..+ .+ +
T Consensus 52 ~~~v~~~g~~~e~~~~l--~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~-~~--~ 121 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEIL--AAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLV-AN--D 121 (135)
T ss_dssp HCTEEEE-S-HHHHHHH--HC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE--TT---
T ss_pred CCCEEEcCCHHHHHHHH--HhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEE-CC--C
Confidence 5699999998643 456 45666655 1 235899999999999999765 122333446788777 22 7
Q ss_pred HHHHHHHHHHHhCC
Q psy16503 137 EETVLVALRTVLGN 150 (244)
Q Consensus 137 ~~~l~~ai~~ll~~ 150 (244)
.+++.++|.++++|
T Consensus 122 ~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 122 PEELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999865
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.034 Score=49.41 Aligned_cols=159 Identities=14% Similarity=0.162 Sum_probs=102.2
Q ss_pred HhcCCCceEEEEcCCCCCCCCCCHHHHHHHHH----HHhcCC-CeEEEEecCCC--------CCCCCCCEEEecc---CC
Q psy16503 10 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLR----AFEQIP-QRVIWKWEGEN--------MSGKIDKILLKSW---AP 73 (244)
Q Consensus 10 l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~----al~~~~-~~viw~~~~~~--------~~~~~~nv~~~~~---~p 73 (244)
+...+++.+++++=-... .. +.++.+.+ ..+..+ ..|+.-..... .-+..+++++.+- .+
T Consensus 199 ~~~~~~~~iLvT~HRreN---~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 199 LDDKDKKYILVTAHRREN---VG-EPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred hccccCcEEEEEcchhhc---cc-ccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHH
Confidence 333445789998744422 22 33444444 444442 24444333221 0112346777664 45
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y 153 (244)
...++ .++.+++|-.|. -.-||...|+|++.+=..-+++. ..+.|.-+.+.. +.+.+.+++.+++++++.
T Consensus 275 f~~L~--~~a~~iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg~---~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 275 FHNLM--KNAFLILTDSGG-IQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVGT---DEENILDAATELLEDEEF 344 (383)
T ss_pred HHHHH--HhceEEEecCCc-hhhhHHhcCCcEEeeccCCCCcc----ceecCceEEeCc---cHHHHHHHHHHHhhChHH
Confidence 66777 568899997664 47899999999999977777776 345566666654 579999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 154 KKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 154 ~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
.++|.+...-+.+ ..+.++.++.+.+-..
T Consensus 345 ~~~m~~~~npYgd--g~as~rIv~~l~~~~~ 373 (383)
T COG0381 345 YERMSNAKNPYGD--GNASERIVEILLNYFD 373 (383)
T ss_pred HHHHhcccCCCcC--cchHHHHHHHHHHHhh
Confidence 9988887766665 3456666665554443
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.05 Score=49.23 Aligned_cols=99 Identities=14% Similarity=0.126 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCCe-EEEEecCCCCCCCCCCEEEeccCC-h---hhhhCCCCeeEEEec----CChhhHHHHHHhCCcEE
Q psy16503 36 RKAFLRAFEQIPQR-VIWKWEGENMSGKIDKILLKSWAP-Q---RDILDHPNVKVFISH----GGFLGTTEALYSGVPII 106 (244)
Q Consensus 36 ~~~i~~al~~~~~~-viw~~~~~~~~~~~~nv~~~~~~p-q---~~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i 106 (244)
...+++++..++.. -++..|+.. +..++++....+.+ + .+++ ..+|+||.- |-.+++.||+++|+|+|
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~-~~~~~~v~~~g~~~~~~~l~~~y--~~aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFS-PFTAGNVVNHGFETDKRKLMSAL--NQMDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCC-cccccceEEecCcCCHHHHHHHH--HhCCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 45677887776543 244455422 22345677777753 3 2345 568888863 55689999999999999
Q ss_pred ecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHH
Q psy16503 107 GIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 144 (244)
Q Consensus 107 ~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 144 (244)
+....+ . ..+...+.|..+++. +.+.|.+++
T Consensus 335 at~~gG----~-~Eiv~~~~G~lv~~~--d~~~La~~~ 365 (405)
T PRK10125 335 ATHSDA----A-REVLQKSGGKTVSEE--EVLQLAQLS 365 (405)
T ss_pred EeCCCC----h-HHhEeCCcEEEECCC--CHHHHHhcc
Confidence 998765 1 223334579988766 467777654
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.056 Score=50.72 Aligned_cols=119 Identities=19% Similarity=0.148 Sum_probs=73.9
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCC----C------CCCCCCEEEeccCChh-hhhCCCCe
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN----M------SGKIDKILLKSWAPQR-DILDHPNV 83 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~----~------~~~~~nv~~~~~~pq~-~lL~h~~~ 83 (244)
..++.+.|-.... ..+...++.+...++..+. ++++ +|+.. + .+..++|.+.++.++. +++ ..+
T Consensus 398 ~~vIg~VgRl~~~-Kg~~~LI~A~a~llk~~pdirLvI-VGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~L--aaA 473 (578)
T PRK15490 398 DTTIGGVFRFVGD-KNPFAWIDFAARYLQHHPATRFVL-VGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWL--QKM 473 (578)
T ss_pred CcEEEEEEEEehh-cCHHHHHHHHHHHHhHCCCeEEEE-EeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHH--HhC
Confidence 3455566655432 2245556666665555554 5444 44321 1 1245789999986544 456 778
Q ss_pred eEEEec---CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHH
Q psy16503 84 KVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 144 (244)
Q Consensus 84 ~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 144 (244)
|+|+.. -| .+++.||+++|+|+|+...- .+...+.+...|..++..+ .+.+.+++
T Consensus 474 DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp~~D--~~aLa~ai 532 (578)
T PRK15490 474 NVFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILDDAQ--TVNLDQAC 532 (578)
T ss_pred CEEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEECCCC--hhhHHHHH
Confidence 999863 33 67999999999999988653 3456666677898887654 34444444
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.13 Score=45.80 Aligned_cols=119 Identities=18% Similarity=0.159 Sum_probs=70.5
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecC-CC--CC--CCCCCEEEeccCChhh---hhCCCCeeEE
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEG-EN--MS--GKIDKILLKSWAPQRD---ILDHPNVKVF 86 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~-~~--~~--~~~~nv~~~~~~pq~~---lL~h~~~~l~ 86 (244)
+.+++..|+... ....+.+..+++ ..+. ++++.-++ .. .. ...+||++.+++|..+ .+ ..+|++
T Consensus 205 ~~~i~y~G~l~~--~~d~~ll~~la~---~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l--~~~Dv~ 277 (373)
T cd04950 205 RPVIGYYGAIAE--WLDLELLEALAK---ARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYL--AGFDVA 277 (373)
T ss_pred CCEEEEEecccc--ccCHHHHHHHHH---HCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHH--HhCCEE
Confidence 556777788854 233444444443 3343 55543222 11 11 1247999999998664 45 456666
Q ss_pred Ee--------cCC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 87 IS--------HGG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 87 It--------hgG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
+. .++ .+.+.|++++|+|+|..++- ......+.+.... + +.+++.++|++++.++
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~~~~~~~-~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYEDEVVLIA-D--DPEEFVAAIEKALLED 341 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcCcEEEeC-C--CHHHHHHHHHHHHhcC
Confidence 53 223 35699999999999988641 2222223233332 2 6899999999976543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.063 Score=48.77 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=58.9
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHH---HcCceeecC
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE---KAGFGVTLP 131 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~---~~G~g~~l~ 131 (244)
..++|.+.+++|+.+ +| ..+++++.- |=..++.||+++|+|+|+....+.-. ..+. +...|...+
T Consensus 303 l~~~V~f~g~v~~~~l~~~l--~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~---~iv~~~~~g~~G~l~~ 377 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEEL--STASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL---DIVVPWDGGPTGFLAS 377 (419)
T ss_pred CCCeEEEecCCCHHHHHHHH--HhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCch---heeeccCCCCceEEeC
Confidence 457899999988664 56 567776642 22358999999999999875433111 1122 345677652
Q ss_pred CCCCCHHHHHHHHHHHhCChh-HHHHHH
Q psy16503 132 YDQITEETVLVALRTVLGNPS-YKKRAE 158 (244)
Q Consensus 132 ~~~~~~~~l~~ai~~ll~~~~-y~~~a~ 158 (244)
+.+++.++|.++++++. .++.+.
T Consensus 378 ----d~~~la~ai~~ll~~~~~~~~~~~ 401 (419)
T cd03806 378 ----TAEEYAEAIEKILSLSEEERLRIR 401 (419)
T ss_pred ----CHHHHHHHHHHHHhCCHHHHHHHH
Confidence 68999999999998654 343333
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.16 Score=49.73 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=64.0
Q ss_pred CCCEEEeccC-Chh---hhhCC--CCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 63 IDKILLKSWA-PQR---DILDH--PNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 63 ~~nv~~~~~~-pq~---~lL~h--~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
.++|.+.++. |.. +++.+ ..+++|+.- |-..++.||+++|+|+|+-...+ ....+.+-.-|..+++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg~tGfLVdp 693 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDGVSGFHIDP 693 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCC
Confidence 4678887764 322 23321 234677753 33468999999999999975543 4455555667999876
Q ss_pred CCCCHHHHHHHHHHHh----CChhHHHHHHHHHHH
Q psy16503 133 DQITEETVLVALRTVL----GNPSYKKRAEKVARL 163 (244)
Q Consensus 133 ~~~~~~~l~~ai~~ll----~~~~y~~~a~~~s~~ 163 (244)
. +.+++.++|.+++ .|+..++++.+.+..
T Consensus 694 ~--D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 694 Y--HGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred C--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 5 4788888888775 688887777766544
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.11 Score=47.82 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=80.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCC-CC--------CCCCCCEEEeccCChh---hhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGE-NM--------SGKIDKILLKSWAPQR---DILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~-~~--------~~~~~nv~~~~~~pq~---~lL~ 79 (244)
++.+++..|..... +-...+++++..+ +.++++.-+++ .. ...+.++.+....+.. .++
T Consensus 290 ~~~~i~~vGrl~~~-----Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~- 363 (473)
T TIGR02095 290 DVPLFGVISRLTQQ-----KGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIY- 363 (473)
T ss_pred CCCEEEEEecCccc-----cChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH-
Confidence 45677777887542 2233344444332 34666543331 11 1245677776655554 355
Q ss_pred CCCeeEEEec---CC-hhhHHHHHHhCCcEEecCCCc--chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC----
Q psy16503 80 HPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG---- 149 (244)
Q Consensus 80 h~~~~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~---- 149 (244)
..+|+++.- -| ..+..||+++|+|+|+-...+ |...+...-...+.|..++.. +.+++.++|.+++.
T Consensus 364 -~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~--d~~~la~~i~~~l~~~~~ 440 (473)
T TIGR02095 364 -AGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY--DPGALLAALSRALRLYRQ 440 (473)
T ss_pred -HhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHHHHhc
Confidence 778888853 23 348899999999999875432 211110000122778888654 57899999999887
Q ss_pred ChhHHHHHHHHH
Q psy16503 150 NPSYKKRAEKVA 161 (244)
Q Consensus 150 ~~~y~~~a~~~s 161 (244)
|+..++++.+.+
T Consensus 441 ~~~~~~~~~~~~ 452 (473)
T TIGR02095 441 DPSLWEALQKNA 452 (473)
T ss_pred CHHHHHHHHHHH
Confidence 666555555433
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.22 Score=48.88 Aligned_cols=96 Identities=11% Similarity=0.112 Sum_probs=61.1
Q ss_pred CCCEEEecc----CChhhhhC--CCCeeEEEec---CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 63 IDKILLKSW----APQRDILD--HPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 63 ~~nv~~~~~----~pq~~lL~--h~~~~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
.++|.+.+. .+..++.. ...+++|+.- -| ..++.||+++|+|+|+....+ ....+.+-..|..+++
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~P 716 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHIDP 716 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCC
Confidence 456776553 23333331 0135677753 23 358999999999999976543 3444555557999886
Q ss_pred CCCCHHHHHHHHHH----HhCChhHHHHHHHHHHHH
Q psy16503 133 DQITEETVLVALRT----VLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 133 ~~~~~~~l~~ai~~----ll~~~~y~~~a~~~s~~~ 164 (244)
. +.+++.++|.+ ++.|+..++++.+.+...
T Consensus 717 ~--D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~r 750 (815)
T PLN00142 717 Y--HGDEAANKIADFFEKCKEDPSYWNKISDAGLQR 750 (815)
T ss_pred C--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 5 46777777655 457888888777765443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.082 Score=49.48 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=70.8
Q ss_pred CCEEEeccCCh---hhhhCCCCeeEEEec---CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCH
Q psy16503 64 DKILLKSWAPQ---RDILDHPNVKVFISH---GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 137 (244)
Q Consensus 64 ~nv~~~~~~pq---~~lL~h~~~~l~Ith---gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 137 (244)
..|.+.++.+. ...+ ..++++|.- -|.++..||+.+|+|+| .......+....-|..++ +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~--~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~----d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISAL--DKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID----DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHH--hhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC----CH
Confidence 57788887763 2466 678888875 47779999999999999 233445666666788773 67
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy16503 138 ETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYW 178 (244)
Q Consensus 138 ~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ 178 (244)
++|.+++..+|.+++-.+.+..-|-...++ .+....+..|
T Consensus 476 ~~l~~al~~~L~~~~~wn~~~~~sy~~~~~-yS~~~i~~kW 515 (519)
T TIGR03713 476 SELLKALDYYLDNLKNWNYSLAYSIKLIDD-YSSENIIERL 515 (519)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 999999999999987666666655544432 3434444444
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.039 Score=50.86 Aligned_cols=108 Identities=16% Similarity=0.063 Sum_probs=65.6
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEe---cCC-hhhHHHHHHhCCcEEecCCCc---chhhHHHHHHHcC-ceeec
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFIS---HGG-FLGTTEALYSGVPIIGIPMFG---DQKANIRVVEKAG-FGVTL 130 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~It---hgG-~~s~~Eal~~gvP~i~vP~~~---dQ~~na~~~~~~G-~g~~l 130 (244)
.+++|.+.+++|+.+ +| .++++++. +-| ..++.||+++|+|+|+....+ |-..+. ..| .|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll--~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~----~~g~tG~l~ 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLL--GGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDE----DGQQTGFLA 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHH--HhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecC----CCCcccccC
Confidence 467899999998664 55 56777773 122 348999999999999986533 111100 002 34443
Q ss_pred CCCCCCHHHHHHHHHHHhCC-hhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 131 PYDQITEETVLVALRTVLGN-PSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 131 ~~~~~~~~~l~~ai~~ll~~-~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+ +.+++.++|.+++++ +..++++.+.++....+ .+...-+..|.+
T Consensus 407 ~----~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~-FS~e~~~~~~~~ 452 (463)
T PLN02949 407 T----TVEEYADAILEVLRMRETERLEIAAAARKRANR-FSEQRFNEDFKD 452 (463)
T ss_pred C----CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-cCHHHHHHHHHH
Confidence 2 689999999999984 55555555544433322 444444444433
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.23 Score=45.66 Aligned_cols=125 Identities=16% Similarity=0.159 Sum_probs=71.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC-----C----CCCCCCEEE-eccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKILL-KSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~-----~----~~~~~nv~~-~~~~pq~---~lL 78 (244)
+..+++..|..... +-...+++++.++ +.++++.-+++. + ...+.++.+ ..+ +.. .++
T Consensus 281 ~~~~i~~vGRl~~~-----KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~ 354 (466)
T PRK00654 281 DAPLFAMVSRLTEQ-----KGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIY 354 (466)
T ss_pred CCcEEEEeeccccc-----cChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHH
Confidence 35677777887432 2233344444332 456665433221 1 123456554 445 432 455
Q ss_pred CCCCeeEEEec---CC-hhhHHHHHHhCCcEEecCCCc--chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 79 DHPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 79 ~h~~~~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
..+|+++.- -| ..+..||+++|+|+|+....+ |...+...-.+.+.|..++.. +.+++.++|.+++.
T Consensus 355 --~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~--d~~~la~~i~~~l~ 427 (466)
T PRK00654 355 --AGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDF--NAEDLLRALRRALE 427 (466)
T ss_pred --hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHH
Confidence 788888863 23 358999999999999875422 211111001233778888765 57899999999875
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.22 Score=46.23 Aligned_cols=135 Identities=10% Similarity=0.065 Sum_probs=76.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-----C----CCCCCCEEEeccCChh---hhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-----M----SGKIDKILLKSWAPQR---DILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-----~----~~~~~nv~~~~~~pq~---~lL~h~~ 82 (244)
+..++...|.....+ ..+.+-..+..+.+.+.+++..-+++. + ...+.++.+...++.. .++ +.
T Consensus 306 ~~~~i~~vgRl~~~K--G~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~--a~ 381 (489)
T PRK14098 306 ETPLVGVIINFDDFQ--GAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI--AG 381 (489)
T ss_pred CCCEEEEeccccccC--cHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH--Hh
Confidence 345677777774322 222222222223223445554332221 1 1246789888888764 466 78
Q ss_pred eeEEEecC----ChhhHHHHHHhCCcEEecCCCc--chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh---CChhH
Q psy16503 83 VKVFISHG----GFLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL---GNPSY 153 (244)
Q Consensus 83 ~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll---~~~~y 153 (244)
+|+|+.-. -..+..||+++|+|.|+....+ |...+ ...+.+.|..++.. +.+.+.++|.+++ +|+..
T Consensus 382 aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~~--d~~~la~ai~~~l~~~~~~~~ 457 (489)
T PRK14098 382 LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHDY--TPEALVAKLGEALALYHDEER 457 (489)
T ss_pred CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeCCC--CHHHHHHHHHHHHHHHcCHHH
Confidence 89988632 1247899999999988875422 22111 01124678887654 5889999999865 45543
Q ss_pred HHHH
Q psy16503 154 KKRA 157 (244)
Q Consensus 154 ~~~a 157 (244)
..++
T Consensus 458 ~~~~ 461 (489)
T PRK14098 458 WEEL 461 (489)
T ss_pred HHHH
Confidence 3333
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.069 Score=46.40 Aligned_cols=133 Identities=13% Similarity=0.155 Sum_probs=81.5
Q ss_pred HHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-C------CCCCCCCEEEecc--CChh-
Q psy16503 7 KKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSW--APQR- 75 (244)
Q Consensus 7 ~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~------~~~~~~nv~~~~~--~pq~- 75 (244)
.+++... +++.|.+..|+.......|.+...++++.+.+.+.++++..++. + +...-++..+.+- +++.
T Consensus 170 ~~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ 249 (319)
T TIGR02193 170 VAFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVA 249 (319)
T ss_pred hhhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHH
Confidence 3444432 35788888887777788999999999998876566776654532 1 1111112223332 3333
Q ss_pred hhhCCCCeeEEEecCChhhHHHHHHhCCcEEec--CCCcchh----hHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh
Q psy16503 76 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGI--PMFGDQK----ANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 76 ~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~v--P~~~dQ~----~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
.++ .+|+++|+. ..|-++=|.+.|+|++++ |-...+. .+...+. + -..++++++++.++++++|
T Consensus 250 ali--~~a~l~I~~-DSgp~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~----~--~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 250 ALL--AGADAVVGV-DTGLTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALL----G--ESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHH--HcCCEEEeC-CChHHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEc----c--CccCCCCHHHHHHHHHhhC
Confidence 566 789999997 345678888999999987 3211110 0111111 0 0246789999999998875
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.2 Score=44.84 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=87.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CC-eEEEEecCCC--------CCCCCCCEEEecc-CChhhhhC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQ-RVIWKWEGEN--------MSGKIDKILLKSW-APQRDILD 79 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~-~viw~~~~~~--------~~~~~~nv~~~~~-~pq~~lL~ 79 (244)
++++|.+--||-.. --...+..++++.+.+ |. ++++...... ....+.++.+... -...+++
T Consensus 183 ~~~iIaLLPGSR~~---EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m- 258 (373)
T PF02684_consen 183 DKPIIALLPGSRKS---EIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAM- 258 (373)
T ss_pred CCcEEEEeCCCCHH---HHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHH-
Confidence 46889999999842 1134444455554432 32 5665543311 0112223332222 2455677
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHHHcCc-eee---cC--------CCCCCHHHHHHHHHH
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGF-GVT---LP--------YDQITEETVLVALRT 146 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~~~G~-g~~---l~--------~~~~~~~~l~~ai~~ 146 (244)
..+|+.+.-.|. .+.|+...|+|++++ -...=...-++++.+... |+. .+ .++++++.+.+++.+
T Consensus 259 -~~ad~al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ 336 (373)
T PF02684_consen 259 -AAADAALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLE 336 (373)
T ss_pred -HhCcchhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHH
Confidence 678888888886 678999999999887 333334556666655422 211 11 357899999999999
Q ss_pred HhCChhHHHHHHHHHHHHh
Q psy16503 147 VLGNPSYKKRAEKVARLFQ 165 (244)
Q Consensus 147 ll~~~~y~~~a~~~s~~~~ 165 (244)
++.|+..++......+.+.
T Consensus 337 ll~~~~~~~~~~~~~~~~~ 355 (373)
T PF02684_consen 337 LLENPEKRKKQKELFREIR 355 (373)
T ss_pred HhcCHHHHHHHHHHHHHHH
Confidence 9999876555555444443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.25 Score=45.09 Aligned_cols=85 Identities=13% Similarity=0.274 Sum_probs=65.3
Q ss_pred hhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCC-hhH
Q psy16503 76 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGN-PSY 153 (244)
Q Consensus 76 ~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~-~~y 153 (244)
.++ .+++++|..= +-++.-|+..|||+++++. .+.....+...|.... ++.++++.++|.+.++++++| +.+
T Consensus 323 ~iI--s~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y---~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~ 396 (426)
T PRK10017 323 KIL--GACELTVGTR-LHSAIISMNFGTPAIAINY---EHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPAL 396 (426)
T ss_pred HHH--hhCCEEEEec-chHHHHHHHcCCCEEEeee---hHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHHH
Confidence 567 7899999842 2357778899999999988 2555566688888755 788889999999999999988 456
Q ss_pred HHHHHHHHHHHhC
Q psy16503 154 KKRAEKVARLFQD 166 (244)
Q Consensus 154 ~~~a~~~s~~~~~ 166 (244)
++..++.....+.
T Consensus 397 ~~~l~~~v~~~r~ 409 (426)
T PRK10017 397 NARLAEAVSRERQ 409 (426)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666666554
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.57 Score=42.93 Aligned_cols=125 Identities=14% Similarity=0.218 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhcCCC-eEEEEecCC------CCCCCCCCEEEecc-CC-h-hhhhCCCCeeEEEecCC--hhhHHHHHH
Q psy16503 33 SDKRKAFLRAFEQIPQ-RVIWKWEGE------NMSGKIDKILLKSW-AP-Q-RDILDHPNVKVFISHGG--FLGTTEALY 100 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~-~viw~~~~~------~~~~~~~nv~~~~~-~p-q-~~lL~h~~~~l~IthgG--~~s~~Eal~ 100 (244)
...++.+.....++|. ++-..++.+ .+ ..-+|+.+.+- .+ . .+++....+-+-|+||+ ..++.||+.
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~~L-~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~ 369 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTEMSSKLMSL-DKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFE 369 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCcccHHHHHH-HhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHH
Confidence 5667777777778885 554444432 23 22367666654 55 3 35774444444556755 689999999
Q ss_pred hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhC
Q psy16503 101 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 166 (244)
Q Consensus 101 ~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~ 166 (244)
+|+|+++.=..... ...+.. |.....+ +.+++.++|.++|.+++-.+.+....+....
T Consensus 370 ~G~pI~afd~t~~~---~~~i~~---g~l~~~~--~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~ 427 (438)
T TIGR02919 370 YNLLILGFEETAHN---RDFIAS---ENIFEHN--EVDQLISKLKDLLNDPNQFRELLEQQREHAN 427 (438)
T ss_pred cCCcEEEEecccCC---cccccC---CceecCC--CHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 99999997432111 111111 5555443 5799999999999998655555554544443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.62 Score=44.20 Aligned_cols=140 Identities=12% Similarity=0.059 Sum_probs=82.7
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHh--cC--CCeEEEEecCCC--------CCCCC-CCEEEeccCChhhhhCC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE--QI--PQRVIWKWEGEN--------MSGKI-DKILLKSWAPQRDILDH 80 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~--~~--~~~viw~~~~~~--------~~~~~-~nv~~~~~~pq~~lL~h 80 (244)
++++|.+--||-.. --...+..++++.+ .+ +.+++....... ..+.+ .++.+..--...+++
T Consensus 412 ~~~iIaLLPGSR~~---EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m-- 486 (608)
T PRK01021 412 DKPIVAAFPGSRRG---DILRNLTIQVQAFLASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPSQFRYELM-- 486 (608)
T ss_pred CCCEEEEECCCCHH---HHHHHHHHHHHHHHHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecCcchHHHH--
Confidence 45788898999843 22455666677766 43 235655432211 11111 122332210124677
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHHHc----------Cceee-----cC-CCCCCHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKA----------GFGVT-----LP-YDQITEETVLVA 143 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~~~----------G~g~~-----l~-~~~~~~~~l~~a 143 (244)
..||+.+.-.|. .+.|++..|+||+++ -...=-..-++++.+. =+|.. +. .++++++++.++
T Consensus 487 ~aaD~aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~ 565 (608)
T PRK01021 487 RECDCALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAA 565 (608)
T ss_pred HhcCeeeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHH
Confidence 789999999887 678999999999986 2222233456666651 11211 21 357899999999
Q ss_pred HHHHhCChhHHHHHHHH
Q psy16503 144 LRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 144 i~~ll~~~~y~~~a~~~ 160 (244)
+ +++.|+.+++++++-
T Consensus 566 l-~lL~d~~~r~~~~~~ 581 (608)
T PRK01021 566 L-DILKTSQSKEKQKDA 581 (608)
T ss_pred H-HHhcCHHHHHHHHHH
Confidence 7 888887666555543
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=1.1 Score=41.49 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=57.6
Q ss_pred CCCE-EEeccCChhhhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCc--chhhHHHHH-H--HcCceeecCC
Q psy16503 63 IDKI-LLKSWAPQRDILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFG--DQKANIRVV-E--KAGFGVTLPY 132 (244)
Q Consensus 63 ~~nv-~~~~~~pq~~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~--dQ~~na~~~-~--~~G~g~~l~~ 132 (244)
+.++ .+.++-....-+..+.+|+|+.- |-..+..||+++|+|.|+....+ |........ + ..+.|..++.
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~ 428 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP 428 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC
Confidence 4555 56666333322222568998862 22357899999997766654322 221111000 1 1156888876
Q ss_pred CCCCHHHHHHHHHH---HhCChhHHHHHHHHH
Q psy16503 133 DQITEETVLVALRT---VLGNPSYKKRAEKVA 161 (244)
Q Consensus 133 ~~~~~~~l~~ai~~---ll~~~~y~~~a~~~s 161 (244)
. +.+++.++|.+ +++|+..++++.+.+
T Consensus 429 ~--d~~~La~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 429 V--TADALAAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred C--CHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 5 58899999997 667777666666654
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.83 Score=39.93 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=73.8
Q ss_pred HHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHh----cCCCeEEEEecCCC----------CCCCCCCEEEecc--
Q psy16503 8 KFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQRVIWKWEGEN----------MSGKIDKILLKSW-- 71 (244)
Q Consensus 8 ~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~----~~~~~viw~~~~~~----------~~~~~~nv~~~~~-- 71 (244)
.-+....++.+.|-.|+......++.+....+++.+. +.+..+....+.-. .....+.+.+.+-
T Consensus 139 ~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~ 218 (311)
T PF06258_consen 139 PRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTG 218 (311)
T ss_pred hhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCC
Confidence 3344445677888888776666777775555544443 33445555554311 1112344433332
Q ss_pred -CChhhhhCCCCeeEE-EecCChhhHHHHHHhCCcEEecCCCcchhh----HHHHHHHcCceeecCC
Q psy16503 72 -APQRDILDHPNVKVF-ISHGGFLGTTEALYSGVPIIGIPMFGDQKA----NIRVVEKAGFGVTLPY 132 (244)
Q Consensus 72 -~pq~~lL~h~~~~l~-IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~----na~~~~~~G~g~~l~~ 132 (244)
-|..+.|+ .+|.+ ||--..+.++||+..|+|+.++|+.. +.. -...+.+.|+-..++.
T Consensus 219 ~nPy~~~La--~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~~ 282 (311)
T PF06258_consen 219 ENPYLGFLA--AADAIVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFTG 282 (311)
T ss_pred CCcHHHHHH--hCCEEEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHCCCEEECCC
Confidence 36778884 45554 55555788999999999999998865 222 4455666777777653
|
The function of this family is unknown. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.42 Score=46.14 Aligned_cols=80 Identities=20% Similarity=0.120 Sum_probs=55.3
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHH
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 139 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 139 (244)
++.+.++.+.. +++ ..+|+|+.- |=.+++.||+++|+|+|+....+... +...+.|... -+.++
T Consensus 602 ~V~FLG~~dd~~~ly--asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~g~nGll~----~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSL--HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRSFPNCLTY----KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----EeecCCeEec----CCHHH
Confidence 47777777655 477 678888863 33678999999999999986644321 2222333332 25899
Q ss_pred HHHHHHHHhCChhHHH
Q psy16503 140 VLVALRTVLGNPSYKK 155 (244)
Q Consensus 140 l~~ai~~ll~~~~y~~ 155 (244)
+.++|.+++.++.-+.
T Consensus 671 fAeAI~~LLsd~~~rl 686 (794)
T PLN02501 671 FVAKVKEALANEPQPL 686 (794)
T ss_pred HHHHHHHHHhCchhhh
Confidence 9999999998876443
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=94.49 E-value=2.2 Score=39.39 Aligned_cols=73 Identities=16% Similarity=0.082 Sum_probs=52.3
Q ss_pred EeccCChhhhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHH
Q psy16503 68 LKSWAPQRDILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVA 143 (244)
Q Consensus 68 ~~~~~pq~~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~a 143 (244)
+..+.+..+++ ..+|+|+.- +-.+++.||+++|+|+|+....+ + ..+.+.+.|...+ +.+++.++
T Consensus 288 f~G~~~~~~~~--~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~~----~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLF--HDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTYD----DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEecC----CHHHHHHH
Confidence 44555555677 677999876 44689999999999999985433 1 3344455555552 57899999
Q ss_pred HHHHhCCh
Q psy16503 144 LRTVLGNP 151 (244)
Q Consensus 144 i~~ll~~~ 151 (244)
+.+++.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99999764
|
|
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.42 Score=42.40 Aligned_cols=132 Identities=18% Similarity=0.141 Sum_probs=73.9
Q ss_pred HHhcCCCeEEEEecC---CCC---CCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcch
Q psy16503 42 AFEQIPQRVIWKWEG---ENM---SGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQ 114 (244)
Q Consensus 42 al~~~~~~viw~~~~---~~~---~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ 114 (244)
.+...+..++++... ... ....+++...+. .+-.++| ..+|+.||--.. .+.|.+..++|+|....-.|+
T Consensus 224 ~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll--~~aDiLITDySS-i~fD~~~l~KPiify~~D~~~ 300 (369)
T PF04464_consen 224 FLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLL--AAADILITDYSS-IIFDFLLLNKPIIFYQPDLEE 300 (369)
T ss_dssp HHHTTTEEEEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHH--HT-SEEEESS-T-HHHHHGGGT--EEEE-TTTTT
T ss_pred HHhCCCcEEEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHH--HhcCEEEEechh-HHHHHHHhCCCEEEEeccHHH
Confidence 444555566766543 111 234567776544 4577888 789999998754 799999999999988654444
Q ss_pred hhHHH----HHHHcCceeecCCCCCCHHHHHHHHHHHhCChh-HHHHHHHHHHHHhC-CCCChHHHHHHHHH
Q psy16503 115 KANIR----VVEKAGFGVTLPYDQITEETVLVALRTVLGNPS-YKKRAEKVARLFQD-RPMPPLDTAIYWIE 180 (244)
Q Consensus 115 ~~na~----~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~-y~~~a~~~s~~~~~-~~~~~~~~a~~~ie 180 (244)
....+ -..+...|..+ -+.++|.++|++++.++. ++++.++..+.+.. ....+.++++++|.
T Consensus 301 Y~~~rg~~~~~~~~~pg~~~----~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 301 YEKERGFYFDYEEDLPGPIV----YNFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYIF 368 (369)
T ss_dssp TTTTSSBSS-TTTSSSS-EE----SSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHHH
T ss_pred HhhccCCCCchHhhCCCcee----CCHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHh
Confidence 32210 01122223332 267999999999987654 45666666666643 22466777766653
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.27 Score=39.17 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=38.6
Q ss_pred CCCCCEEEeccCChh---hhhCCCCeeEEEecCC----hhhHHHHHHhCCcEEecCCCc
Q psy16503 61 GKIDKILLKSWAPQR---DILDHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFG 112 (244)
Q Consensus 61 ~~~~nv~~~~~~pq~---~lL~h~~~~l~IthgG----~~s~~Eal~~gvP~i~vP~~~ 112 (244)
...+|+.+.++++.. ..+. ..++++++-.. .+++.||+++|+|+|+.+..+
T Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~-~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 158 LLLDRVIFLGGLDPEELLALLL-AAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CCcccEEEeCCCCcHHHHHHHh-hcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 346799999986322 3332 45899998775 789999999999999987644
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=94.06 E-value=4.1 Score=40.86 Aligned_cols=93 Identities=19% Similarity=0.087 Sum_probs=61.4
Q ss_pred CCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCc--chhhH--HHHH-HHcCceeec
Q psy16503 63 IDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFG--DQKAN--IRVV-EKAGFGVTL 130 (244)
Q Consensus 63 ~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~--dQ~~n--a~~~-~~~G~g~~l 130 (244)
+++|.+..+.+.. .++ +.+|+|+.- |-..+..||+++|+|.|+....+ |...+ ...+ ...+-|..+
T Consensus 836 ~drV~FlG~~de~lah~IY--AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIY--AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHH--HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 5678888888764 466 789999963 22458999999999999876533 22111 1111 123567777
Q ss_pred CCCCCCHHHHHHHHHHHhC----ChhHHHHHHH
Q psy16503 131 PYDQITEETVLVALRTVLG----NPSYKKRAEK 159 (244)
Q Consensus 131 ~~~~~~~~~l~~ai~~ll~----~~~y~~~a~~ 159 (244)
+.. +.+.+.++|.+++. |+..++++.+
T Consensus 914 ~~~--D~eaLa~AL~rAL~~~~~dpe~~~~L~~ 944 (977)
T PLN02939 914 LTP--DEQGLNSALERAFNYYKRKPEVWKQLVQ 944 (977)
T ss_pred cCC--CHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 654 67888888888764 6666666654
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.077 Score=38.10 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=45.4
Q ss_pred HHHHHhcC-CCceEEEEcCCCCCCCCCCH--HHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEE
Q psy16503 6 IKKFLDES-VNGVIYFSMGSIIQGKSFPS--DKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKIL 67 (244)
Q Consensus 6 l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~--~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~ 67 (244)
+..|+... +++.|.+|+|+......... ..+..+++++..++..++...+... +...|+||+
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-TTTEE
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCCCCCC
Confidence 44577665 47899999999965211122 4889999999999999999988743 456788875
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=93.04 E-value=1 Score=38.24 Aligned_cols=92 Identities=11% Similarity=0.116 Sum_probs=57.2
Q ss_pred CCceEEEEcCCCCC-----CCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC-----------CCCCCCCEEEeccCChhh
Q psy16503 14 VNGVIYFSMGSIIQ-----GKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN-----------MSGKIDKILLKSWAPQRD 76 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~-----~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~-----------~~~~~~nv~~~~~~pq~~ 76 (244)
+++.|+|-+=...- .+.......+.+.++.+..| .+++++....+ ....+..+.+.+-.+-.+
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYE 195 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHH
Confidence 36777777632211 01112334444455555554 47777765411 112233455556678889
Q ss_pred hhCCCCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 77 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 77 lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
++ .+++.+||-.+. +-.||+.+|+|++++
T Consensus 196 Ll--~~s~~VvtinSt-vGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 196 LL--EQSDAVVTINST-VGLEALLHGKPVIVF 224 (269)
T ss_pred HH--HhCCEEEEECCH-HHHHHHHcCCceEEe
Confidence 99 779999998765 678999999999997
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=92.98 E-value=6.3 Score=36.29 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=48.6
Q ss_pred EeccCChhh---hhCCCCeeEEEe---cCC-hhhHHHHHHhCCc----EEecCCCcchhhHHHHHHHcCceeecCCCCCC
Q psy16503 68 LKSWAPQRD---ILDHPNVKVFIS---HGG-FLGTTEALYSGVP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136 (244)
Q Consensus 68 ~~~~~pq~~---lL~h~~~~l~It---hgG-~~s~~Eal~~gvP----~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~ 136 (244)
+..++++.+ ++ ..+|+|+. +-| ..++.||+++|+| +|+--..+--.. ..-|+.+++. +
T Consensus 345 ~~g~v~~~el~~~y--~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~~~g~lv~p~--d 413 (460)
T cd03788 345 LYRSLPREELAALY--RAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------LSGALLVNPY--D 413 (460)
T ss_pred EeCCCCHHHHHHHH--HhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------cCCCEEECCC--C
Confidence 345677664 45 67888885 334 4678999999999 555433221111 2346777655 5
Q ss_pred HHHHHHHHHHHhCCh
Q psy16503 137 EETVLVALRTVLGNP 151 (244)
Q Consensus 137 ~~~l~~ai~~ll~~~ 151 (244)
.+++.++|.++++++
T Consensus 414 ~~~la~ai~~~l~~~ 428 (460)
T cd03788 414 IDEVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHHHcCC
Confidence 789999999999865
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.98 E-value=0.64 Score=41.45 Aligned_cols=161 Identities=14% Similarity=0.132 Sum_probs=92.5
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC--------C--CCCCCCEEEeccCChhhh
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------M--SGKIDKILLKSWAPQRDI 77 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~--------~--~~~~~nv~~~~~~pq~~l 77 (244)
.+.+++.+--||-.. --..++..+.++..++ | .+|+.-.-... . .....++.+.+- .-.+.
T Consensus 186 ~~~~~lalLPGSR~s---EI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a 261 (381)
T COG0763 186 ADEKTLALLPGSRRS---EIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG-EKRKA 261 (381)
T ss_pred CCCCeEEEecCCcHH---HHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCc-hHHHH
Confidence 346899999999843 1233444445544433 3 36666544311 0 011122222221 12235
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCC-CcchhhHHHHHHHcCce----eecC--------CCCCCHHHHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFG----VTLP--------YDQITEETVLVAL 144 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~-~~dQ~~na~~~~~~G~g----~~l~--------~~~~~~~~l~~ai 144 (244)
+ ..+|+.+...|. .+.|++.+|+||++.=- -.=-+.-++++.+.... +..+ .++++++.|.+++
T Consensus 262 ~--~~aD~al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l 338 (381)
T COG0763 262 F--AAADAALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARAL 338 (381)
T ss_pred H--HHhhHHHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHH
Confidence 5 678888888886 57799999999998621 11122344444443221 1111 2568899999999
Q ss_pred HHHhCCh----hHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q psy16503 145 RTVLGNP----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 145 ~~ll~~~----~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~ 182 (244)
.+++.|+ ..++...++.+.++. ..+.+.++..+-..
T Consensus 339 ~~ll~~~~~~~~~~~~~~~l~~~l~~--~~~~e~aA~~vl~~ 378 (381)
T COG0763 339 EELLLNGDRREALKEKFRELHQYLRE--DPASEIAAQAVLEL 378 (381)
T ss_pred HHHhcChHhHHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHH
Confidence 9999987 455666666777765 24677777655433
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=92.66 E-value=8 Score=39.32 Aligned_cols=97 Identities=12% Similarity=-0.018 Sum_probs=59.0
Q ss_pred CCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCc--chhhH-------HHHHHHcCc
Q psy16503 63 IDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFG--DQKAN-------IRVVEKAGF 126 (244)
Q Consensus 63 ~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~--dQ~~n-------a~~~~~~G~ 126 (244)
+.++.+....+.. .++ +.+|+|+.- |=..+.+||+++|+|.|+-...+ |.... +......+-
T Consensus 899 ~~rV~f~g~~de~lah~iy--aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~t 976 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIY--AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPN 976 (1036)
T ss_pred CCeEEEEecCCHHHHHHHH--HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCc
Confidence 5577776555543 455 789999953 22358999999999988764422 22211 110011246
Q ss_pred eeecCCCCCCHHHHHHHHHHHhCC-hhHHHHHHHHHHH
Q psy16503 127 GVTLPYDQITEETVLVALRTVLGN-PSYKKRAEKVARL 163 (244)
Q Consensus 127 g~~l~~~~~~~~~l~~ai~~ll~~-~~y~~~a~~~s~~ 163 (244)
|...+.. +++.|..+|.+++.+ ...+..+.++++.
T Consensus 977 Gflf~~~--d~~aLa~AL~raL~~~~~~~~~~~~~~r~ 1012 (1036)
T PLN02316 977 GFSFDGA--DAAGVDYALNRAISAWYDGRDWFNSLCKR 1012 (1036)
T ss_pred eEEeCCC--CHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 8887654 588999999999865 2333443444433
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=92.47 E-value=1 Score=39.21 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=77.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-C------CCCCCCCEEEecc--CChh-hhhCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSW--APQR-DILDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~------~~~~~~nv~~~~~--~pq~-~lL~h~~~~ 84 (244)
++.|++..|+.......|.+...++++.+.+.+.++++..|+. + +.+..+++.+.+- +.+. .++ ..++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali--~~a~ 255 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVL--AGAK 255 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHH--HhCC
Confidence 4566655565555578999999999999876666776644431 1 1111223444433 3333 455 7899
Q ss_pred EEEecCChhhHHHHHHhCCcEEec--CCCc----chhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 85 VFISHGGFLGTTEALYSGVPIIGI--PMFG----DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 85 l~IthgG~~s~~Eal~~gvP~i~v--P~~~----dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
++|+.- .|.++=|.+.|+|++++ |-.. ....|...+..- +. ...+++.+++.++++++|+
T Consensus 256 l~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~--~~--cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 256 AVVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSP--GK--SMADLSAETVFQKLETLIS 321 (322)
T ss_pred EEEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCC--Cc--ccccCCHHHHHHHHHHHhh
Confidence 999974 45788899999999998 3321 111111111000 11 1357788999999988763
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.42 E-value=3.4 Score=35.19 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=65.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHH----HhcCCCeEEEEecCCC-----------CCCCCC---CEEEeccCChhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRA----FEQIPQRVIWKWEGEN-----------MSGKID---KILLKSWAPQRD 76 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~a----l~~~~~~viw~~~~~~-----------~~~~~~---nv~~~~~~pq~~ 76 (244)
++.|-|--|+......+.++....+... +++.+-.|+...+... +...|. |-.=.++-|..+
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~ 240 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYID 240 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHH
Confidence 3555555555544445555555554443 4445567777766421 111110 111124458899
Q ss_pred hhCCCCeeEEEecCC-hhhHHHHHHhCCcEEec--CCC-cch-hhHHHHHHHcCceeecCC
Q psy16503 77 ILDHPNVKVFISHGG-FLGTTEALYSGVPIIGI--PMF-GDQ-KANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 77 lL~h~~~~l~IthgG-~~s~~Eal~~gvP~i~v--P~~-~dQ-~~na~~~~~~G~g~~l~~ 132 (244)
.| ..+|.+|+-.. .+...||++.|+|+.+. |-+ .+- ..--+.+++.++++..+.
T Consensus 241 ~L--a~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~ 299 (329)
T COG3660 241 ML--AAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEG 299 (329)
T ss_pred HH--hhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCc
Confidence 99 77888887655 57889999999999776 333 121 123344555666665543
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=91.87 E-value=2.2 Score=37.14 Aligned_cols=98 Identities=22% Similarity=0.370 Sum_probs=60.0
Q ss_pred eccCChhhhhCCCCeeEEEecCChh---------------hHHHHHHhCCcEEecCCCcchhh--HHHHHHHc-Cceeec
Q psy16503 69 KSWAPQRDILDHPNVKVFISHGGFL---------------GTTEALYSGVPIIGIPMFGDQKA--NIRVVEKA-GFGVTL 130 (244)
Q Consensus 69 ~~~~pq~~lL~h~~~~l~IthgG~~---------------s~~Eal~~gvP~i~vP~~~dQ~~--na~~~~~~-G~g~~l 130 (244)
..|-|..|.+...+|.+..+.-..+ .+-.++=.|||+|.+|-.+-|+. .|++-.+. |..+.+
T Consensus 282 ~gWq~~ad~~~kdnc~l~lsqqsfadiLH~adaalgmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltl 361 (412)
T COG4370 282 QGWQPLADRFGKDNCSLWLSQQSFADILHAADAALGMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTL 361 (412)
T ss_pred cCcchhhhhhccCceEEEEeHHHHHHHHHHHHHHHHhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeee
Confidence 3455555555544555555443222 23335558999999999999876 45544444 777766
Q ss_pred CCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 131 PYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 131 ~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
-..+ ...-..+.++++.|+.+.+.++...+.--.+|
T Consensus 362 v~~~--aq~a~~~~q~ll~dp~r~~air~nGqrRiGqa 397 (412)
T COG4370 362 VRPE--AQAAAQAVQELLGDPQRLTAIRHNGQRRIGQA 397 (412)
T ss_pred cCCc--hhhHHHHHHHHhcChHHHHHHHhcchhhccCc
Confidence 5432 33344445559999999988886655444443
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.45 E-value=12 Score=34.64 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=62.8
Q ss_pred eccCChhhh---hCCCCeeEEEe---cCC-hhhHHHHHHhCCc----EEecCCCcchhhHHHHHHHcCceeecCCCCCCH
Q psy16503 69 KSWAPQRDI---LDHPNVKVFIS---HGG-FLGTTEALYSGVP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 137 (244)
Q Consensus 69 ~~~~pq~~l---L~h~~~~l~It---hgG-~~s~~Eal~~gvP----~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 137 (244)
...+|+.++ + ..+|+|+. +-| ..++.||+++|+| +|+--..+-- ..+ +-|+.+++. +.
T Consensus 341 ~~~~~~~el~aly--~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l---~~gllVnP~--d~ 409 (456)
T TIGR02400 341 NRSYDREELMALY--RAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL---NGALLVNPY--DI 409 (456)
T ss_pred cCCCCHHHHHHHH--HhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh---CCcEEECCC--CH
Confidence 345666643 5 67888886 335 4688899999999 7766554422 112 247777665 58
Q ss_pred HHHHHHHHHHhCCh--hHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 138 ETVLVALRTVLGNP--SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 138 ~~l~~ai~~ll~~~--~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
+++.++|.++++++ ..+++++++.+.+.. . .+..|.+..+
T Consensus 410 ~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~--~----~~~~W~~~~l 451 (456)
T TIGR02400 410 DGMADAIARALTMPLEEREERHRAMMDKLRK--N----DVQRWREDFL 451 (456)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh--C----CHHHHHHHHH
Confidence 99999999999753 344455555555443 2 3356666544
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.44 E-value=3.7 Score=34.15 Aligned_cols=89 Identities=27% Similarity=0.451 Sum_probs=56.2
Q ss_pred CCCEEEeccCCh---hhhhCCCCeeEEEec---CCh-hhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 63 IDKILLKSWAPQ---RDILDHPNVKVFISH---GGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 63 ~~nv~~~~~~pq---~~lL~h~~~~l~Ith---gG~-~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
.+++.+..++|. ..++ ..+++++.- .|. .++.||+++|+|++..+..+ ....+.+.+.|......
T Consensus 256 ~~~v~~~g~~~~~~~~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~----~~e~~~~~~~g~~~~~~-- 327 (381)
T COG0438 256 EDNVKFLGYVPDEELAELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGG----IPEVVEDGETGLLVPPG-- 327 (381)
T ss_pred CCcEEEecccCHHHHHHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEECCCCC----hHHHhcCCCceEecCCC--
Confidence 467888888882 2345 445666654 243 44699999999998875531 22222333246533322
Q ss_pred CHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 136 TEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 136 ~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
+.+++.+++..++++++.++...+
T Consensus 328 ~~~~~~~~i~~~~~~~~~~~~~~~ 351 (381)
T COG0438 328 DVEELADALEQLLEDPELREELGE 351 (381)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 689999999999988744444443
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=90.44 E-value=3.7 Score=36.22 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=63.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--C------CC---CCCCEEEecc--CChh-hhhCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--M------SG---KIDKILLKSW--APQR-DILDH 80 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~------~~---~~~nv~~~~~--~pq~-~lL~h 80 (244)
++.|.+..|+.......|.+...++++.+.+.+.++++..+.++ . .. .+..+.+.+- +.+. .++
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali-- 260 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALI-- 260 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHH--
Confidence 57898999998777889999999999998776778777655321 1 11 1122333333 3333 566
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
..++++|+.= .|-++=|.+.|+|++++
T Consensus 261 ~~a~l~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 261 DHAQLFIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 7899999973 45678888999999987
|
|
| >PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional | Back alignment and domain information |
|---|
Probab=90.27 E-value=3 Score=36.07 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCCcEEec
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGVPIIGI 108 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gvP~i~v 108 (244)
.+.++.+.+.+++.+..+.+......... ..+. +..+..++- ..++++|+-||=||+.+++. .++|++++
T Consensus 20 ~e~~~~i~~~L~~~g~~v~v~~~~~~~~~-~~~~---~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGI 93 (291)
T PRK02155 20 AEPLESLAAFLAKRGFEVVFEADTARNIG-LTGY---PALTPEEIG--ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGI 93 (291)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcC-cccc---cccChhHhc--cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEE
Confidence 45677788878777777666432111000 0010 001223332 46899999999999999977 37898888
Q ss_pred CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 109 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 109 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..- .+|.. .+.+.+++.+++++++++
T Consensus 94 n~G-------------~lGFL---~~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 94 NHG-------------RLGFI---TDIPLDDMQETLPPMLAG 119 (291)
T ss_pred cCC-------------Ccccc---ccCCHHHHHHHHHHHHcC
Confidence 431 12332 245678899999998854
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=90.11 E-value=1.4 Score=37.50 Aligned_cols=91 Identities=13% Similarity=0.150 Sum_probs=61.9
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC------CC-C-CCC-EEEecc--CC-hhhhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM------SG-K-IDK-ILLKSW--AP-QRDILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~------~~-~-~~n-v~~~~~--~p-q~~lL~h~~ 82 (244)
++.|.+..|+.......+.+...++++.+...+.++++..+.++. .. . ..+ +.+.+- +. ...++ .+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li--~~ 198 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALL--AR 198 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHH--Hh
Confidence 568888998887777889999999999888767777765443221 11 1 122 222222 22 23566 67
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
++++|+.-. |.++=|.+.|+|++++
T Consensus 199 ~~l~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 199 ADLVVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 999999843 5677778999999987
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.83 E-value=0.73 Score=38.25 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=57.3
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--------C-CCCC-CCEEEeccCC--h-hhhhCC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--------M-SGKI-DKILLKSWAP--Q-RDILDH 80 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--------~-~~~~-~nv~~~~~~p--q-~~lL~h 80 (244)
+++.|.+..|+......+|.+...++++.+.+.+++++...+.++ + ...+ +.+.+.+-.+ + ..++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali-- 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALI-- 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHH--
Confidence 468899999998877889999999999999888777766555422 1 1122 1344444333 3 2566
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
..++++|+.-+ |.++=|.+.|+|+|++
T Consensus 182 ~~a~~~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADLVIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSEEEEESS-HHHHHHHHTT--EEEE
T ss_pred hcCCEEEecCC-hHHHHHHHHhCCEEEE
Confidence 78999999743 5788899999999998
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2 | Back alignment and domain information |
|---|
Probab=89.34 E-value=6.6 Score=31.36 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=58.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecC----CCCCC-CCCCEEEeccCC-hhhhhCCCCeeEEEe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG----ENMSG-KIDKILLKSWAP-QRDILDHPNVKVFIS 88 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~----~~~~~-~~~nv~~~~~~p-q~~lL~h~~~~l~It 88 (244)
++..+|+.|+. .-.+..+.++..+.+-.++=..+. .+..+ ..+..+.++.+. ...+|. ..+|+||.
T Consensus 31 ~g~~lV~GGg~-------~GlM~a~a~ga~~~gG~viGi~p~~l~~~~~~~~~~~~~i~~~~~~~Rk~~m~-~~sda~I~ 102 (178)
T TIGR00730 31 QGWGLVYGGGR-------VGLMGAIADAAMENGGTAVGVNPSGLFSGEVVHQNLTELIEVNGMHERKAMMA-ELADAFIA 102 (178)
T ss_pred CCCEEEECCCh-------HhHHHHHHHHHHhcCCeEEEecchhhhhhhccCCCCCceEEECCHHHHHHHHH-HhCCEEEE
Confidence 46788888764 134566666665555444433321 11111 122344445444 445555 56777777
Q ss_pred -cCChhhHHHHHH---------hCCcEEecC---CCcchhhHHHHHHHcCc
Q psy16503 89 -HGGFLGTTEALY---------SGVPIIGIP---MFGDQKANIRVVEKAGF 126 (244)
Q Consensus 89 -hgG~~s~~Eal~---------~gvP~i~vP---~~~dQ~~na~~~~~~G~ 126 (244)
-||.||+-|.+. +.+|++++- ++.+-....+.+.+.|.
T Consensus 103 lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 103 MPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred cCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 688999999854 499998873 23333333455666664
|
This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=88.95 E-value=6.5 Score=34.45 Aligned_cols=92 Identities=17% Similarity=0.204 Sum_probs=63.7
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--C------CC-CCC-CC-EEEecc--CChh-hhhC
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--N------MS-GKI-DK-ILLKSW--APQR-DILD 79 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~------~~-~~~-~n-v~~~~~--~pq~-~lL~ 79 (244)
+++.|.+..|+.......|.+...++++.+...+.++++..+.+ + .. ..+ ++ +.+.+- +++. .++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali- 258 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALI- 258 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHH-
Confidence 35788899998877788899999999988876667777764422 1 11 111 12 222332 3333 456
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
..++++|+. ..|-++=|.+.|+|+|++
T Consensus 259 -~~a~l~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 259 -DHARLFIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred -HhCCEEEec-CCHHHHHHHHcCCCEEEE
Confidence 789999998 566788899999999987
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=88.53 E-value=1.7 Score=38.18 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=63.0
Q ss_pred CceEEEEcC-CCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------CCC-CCCCEEEecc--CChh-hhhCCCCe
Q psy16503 15 NGVIYFSMG-SIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------MSG-KIDKILLKSW--APQR-DILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~G-s~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~~~-~~~nv~~~~~--~pq~-~lL~h~~~ 83 (244)
++.|++.-| |.......|.+...++++.+.+.+.+|++..+.++ +.. .+..+.+.+- +.+. +++ ..+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li--~~a 252 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALI--AGA 252 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHH--hcC
Confidence 589999999 55567889999999999999888877776555422 111 2222223333 3343 455 689
Q ss_pred eEEEecCChhhHHHHHHhCCcEEec
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
+++|+. ..|-++=|.+.|+|+|++
T Consensus 253 ~l~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 253 DLVIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred CEEEcc-CChHHHHHHHcCCCEEEE
Confidence 999986 344677788899999998
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=87.95 E-value=7.9 Score=34.32 Aligned_cols=128 Identities=15% Similarity=0.138 Sum_probs=83.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEE--ecCCC------C-----CCCC-CCEEE-eccCChh---h
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGEN------M-----SGKI-DKILL-KSWAPQR---D 76 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~--~~~~~------~-----~~~~-~nv~~-~~~~pq~---~ 76 (244)
++.+.|-.|.+.-.++-..+.++.+.+.+. ...+|+.- +++++ . .-.+ +|+.+ .+++|.. +
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~~-~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~ 261 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQFG-DDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLA 261 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhcC-CCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHH
Confidence 456777777776544444444444443321 12366654 33211 0 0123 47754 5688855 5
Q ss_pred hhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 77 ILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 77 lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
+| .+|++.|- .=|.|+++-.++.|+|+.+- .+.---+.+.+.|+-+....++++...+.++=+++..
T Consensus 262 lL--~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 262 LL--SRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLAN 332 (360)
T ss_pred HH--HhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhh
Confidence 77 67877665 36899999999999999875 2222346678889988888899999999998887763
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=87.90 E-value=4.9 Score=34.73 Aligned_cols=94 Identities=11% Similarity=0.063 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCCcEEec
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGVPIIGI 108 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gvP~i~v 108 (244)
.+..+.+.+.+.+.+..+.+.-........+. .+..++. ..+|++|+-||=||+..++. .++|++++
T Consensus 24 ~~~~~~i~~~l~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~--~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilGI 94 (287)
T PRK14077 24 DKEILKLQKILSIYKVEILLEKESAEILDLPG-------YGLDELF--KISDFLISLGGDGTLISLCRKAAEYDKFVLGI 94 (287)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhhcccc-------cchhhcc--cCCCEEEEECCCHHHHHHHHHhcCCCCcEEEE
Confidence 56667777777666666555321111001110 1222332 46899999999999987765 47899988
Q ss_pred CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 109 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 109 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
-.- .+|.. .+++.+++.++++++++++
T Consensus 95 N~G-------------~lGFL---t~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 95 HAG-------------HLGFL---TDITVDEAEKFFQAFFQGE 121 (287)
T ss_pred eCC-------------CcccC---CcCCHHHHHHHHHHHHcCC
Confidence 431 12322 3456788999999988653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=87.74 E-value=23 Score=33.04 Aligned_cols=154 Identities=11% Similarity=0.069 Sum_probs=91.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC---e-EEEEecCCC--------------------C------CCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---R-VIWKWEGEN--------------------M------SGKID 64 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~---~-viw~~~~~~--------------------~------~~~~~ 64 (244)
+..|+++.|-....+.+ ...+.++-..|++-|. + ++.+++... . .+..+
T Consensus 284 ~~kiIl~VDRLDy~KGI-~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~p 362 (487)
T TIGR02398 284 GVKLILSAERVDYTKGI-LEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTP 362 (487)
T ss_pred CceEEEEecccccccCH-HHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCcc
Confidence 35677777777554332 4556666666666664 1 233332210 0 01123
Q ss_pred CEEEeccCChhhhhC-CCCeeEEEe---cCChhhH-HHHHHhCC----cEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 65 KILLKSWAPQRDILD-HPNVKVFIS---HGGFLGT-TEALYSGV----PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 65 nv~~~~~~pq~~lL~-h~~~~l~It---hgG~~s~-~Eal~~gv----P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
-+++...+|..++.+ -..+|+++. .-|+|-+ .|.++++. |+|+--+.+ | .+...-|+.+++.
T Consensus 363 v~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----a--a~~l~~AllVNP~-- 433 (487)
T TIGR02398 363 LQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----A--AVELKGALLTNPY-- 433 (487)
T ss_pred EEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEecccc-----c--hhhcCCCEEECCC--
Confidence 356667788775432 156777665 5688755 49999988 555554432 1 1334457888765
Q ss_pred CHHHHHHHHHHHhCChh--HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 136 TEETVLVALRTVLGNPS--YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 136 ~~~~l~~ai~~ll~~~~--y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.+++.++|.+.|+.+. -+++++++.+.+.. ..+..|.+..+.
T Consensus 434 d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~------~d~~~W~~~fl~ 478 (487)
T TIGR02398 434 DPVRMDETIYVALAMPKAEQQARMREMFDAVNY------YDVQRWADEFLA 478 (487)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHH
Confidence 58999999999998753 44555555555544 245678887664
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1 | Back alignment and domain information |
|---|
Probab=87.58 E-value=7.8 Score=30.31 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=51.5
Q ss_pred HHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-CCCC-CCCEEEecc-CChhhhhCCCC
Q psy16503 6 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-MSGK-IDKILLKSW-APQRDILDHPN 82 (244)
Q Consensus 6 l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-~~~~-~~nv~~~~~-~pq~~lL~h~~ 82 (244)
+-++|.+ ++..+++ |+.. -......++..+.+-.++=..+... ..+. .......++ .+...++. ..
T Consensus 23 lg~~La~--~g~~lv~-Gg~~-------GlM~a~a~ga~~~gg~viGVlp~~l~~~~~~~~~~i~~~~~~~Rk~~m~-~~ 91 (159)
T TIGR00725 23 LGKELAK--KGHILIN-GGRT-------GVMEAVSKGAREAGGLVVGILPDEDFAGNPYLTIKVKTGMNFARNFILV-RS 91 (159)
T ss_pred HHHHHHH--CCCEEEc-CCch-------hHHHHHHHHHHHCCCeEEEECChhhccCCCCceEEEECCCcchHHHHHH-HH
Confidence 3445543 3577777 4441 3345555555444444443344211 1111 112233444 55666666 56
Q ss_pred eeEEEe-cCChhhHHH---HHHhCCcEEecCC
Q psy16503 83 VKVFIS-HGGFLGTTE---ALYSGVPIIGIPM 110 (244)
Q Consensus 83 ~~l~It-hgG~~s~~E---al~~gvP~i~vP~ 110 (244)
+|+||. -||.||+.| ++.+++|+++++.
T Consensus 92 sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 92 ADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred CCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 666666 677888766 4779999999875
|
This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=87.32 E-value=8.3 Score=37.74 Aligned_cols=95 Identities=13% Similarity=0.150 Sum_probs=55.1
Q ss_pred EEEeccCChhhhhC-CCCeeEEEec---CC-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHH
Q psy16503 66 ILLKSWAPQRDILD-HPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 140 (244)
Q Consensus 66 v~~~~~~pq~~lL~-h~~~~l~Ith---gG-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 140 (244)
+++..++++.++.. -..+|+|+.- -| ..++.||+++|+|-.++|+..+--.-+..+ .-|+.+++. +.+++
T Consensus 344 ~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l---~~~llv~P~--d~~~l 418 (726)
T PRK14501 344 HYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL---AEALLVNPN--DIEGI 418 (726)
T ss_pred EEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHh---CcCeEECCC--CHHHH
Confidence 34556778775321 1678888864 34 468899999977522222211111111111 127777765 58999
Q ss_pred HHHHHHHhCCh--hHHHHHHHHHHHHh
Q psy16503 141 LVALRTVLGNP--SYKKRAEKVARLFQ 165 (244)
Q Consensus 141 ~~ai~~ll~~~--~y~~~a~~~s~~~~ 165 (244)
.++|.++++++ +.++++.+..+.+.
T Consensus 419 a~ai~~~l~~~~~e~~~r~~~~~~~v~ 445 (726)
T PRK14501 419 AAAIKRALEMPEEEQRERMQAMQERLR 445 (726)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999854 44445555444443
|
|
| >KOG0853|consensus | Back alignment and domain information |
|---|
Probab=87.13 E-value=0.49 Score=43.75 Aligned_cols=65 Identities=20% Similarity=0.213 Sum_probs=47.8
Q ss_pred hhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 93 LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 93 ~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
-++.||+++|.|+++.--.+ -+..++..--|..++++.-....+.+++.++..|+.++.++.+-.
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G 444 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNG 444 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 37899999999999983322 234445555688888743333479999999999999988877644
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=87.09 E-value=4.6 Score=38.33 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=48.3
Q ss_pred hhhhhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCc-chhhHHHHHHHc-CceeecCCC---C--CCHHHHHH
Q psy16503 74 QRDILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKA-GFGVTLPYD---Q--ITEETVLV 142 (244)
Q Consensus 74 q~~lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~-dQ~~na~~~~~~-G~g~~l~~~---~--~~~~~l~~ 142 (244)
..+++ ..|++++. =|-..++.||+++|+|+|....-+ ..... ..+... ..|+.+... + -+.++|.+
T Consensus 468 y~E~~--~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~ 544 (590)
T cd03793 468 YEEFV--RGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQ 544 (590)
T ss_pred hHHHh--hhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHH
Confidence 44566 78888887 243568999999999999986632 11111 111112 256665421 1 13577888
Q ss_pred HHHHHhCChhHHHHHH
Q psy16503 143 ALRTVLGNPSYKKRAE 158 (244)
Q Consensus 143 ai~~ll~~~~y~~~a~ 158 (244)
+|.++++. +.++++.
T Consensus 545 ~m~~~~~~-~~r~~~~ 559 (590)
T cd03793 545 YMYEFCQL-SRRQRII 559 (590)
T ss_pred HHHHHhCC-cHHHHHH
Confidence 88888844 4444333
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=86.43 E-value=1.6 Score=37.31 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=39.6
Q ss_pred CeeEEEecCChhhHHHHHH------hCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 82 NVKVFISHGGFLGTTEALY------SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~------~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
.+|++|+-||=||+..|+. .++|++++..- .+|.. .+.+.+++.+++++++++
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g 93 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG-------------HLGFY---TDWRPFEVDKLVIALAKD 93 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC-------------Cceec---ccCCHHHHHHHHHHHHcC
Confidence 5789999999999999976 48899998531 12332 345678888888888865
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=86.26 E-value=6.4 Score=34.30 Aligned_cols=91 Identities=12% Similarity=0.138 Sum_probs=61.0
Q ss_pred CceEEEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCC-------CCCCCEE-Eecc--CChh-hhhCCCC
Q psy16503 15 NGVIYFSMGSII-QGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKIDKIL-LKSW--APQR-DILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~-~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~-------~~~~nv~-~~~~--~pq~-~lL~h~~ 82 (244)
++.|.+.-|+.. .....|.+...++++.+.+.+.+++..-+.++.. ..+.++. +.+- +.+. .++ .+
T Consensus 174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali--~~ 251 (334)
T TIGR02195 174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLI--AL 251 (334)
T ss_pred CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHH--Hh
Confidence 578999988863 5678999999999998876566766654432211 1222222 2222 2333 466 78
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
++++|+. ..|-++=|.+.|+|+|++
T Consensus 252 a~l~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 252 AKAVVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred CCEEEee-CCHHHHHHHHcCCCEEEE
Confidence 9999997 345688889999999987
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=86.08 E-value=7.9 Score=34.03 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=60.7
Q ss_pred CCceEEEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC-------CCCC----CC-EEEeccC--Chh-hh
Q psy16503 14 VNGVIYFSMGSII-QGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-------SGKI----DK-ILLKSWA--PQR-DI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~-~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~-------~~~~----~n-v~~~~~~--pq~-~l 77 (244)
+++.|.+..|+.. .....|.+...++++.+.+.+.+++..-+.++. ...+ .+ +.+.+-. .+. .+
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence 3578999999863 567899999999998887556676654332211 0111 11 2233322 233 46
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
+ .+++++|+. ..|-++=|.+.|+|++++
T Consensus 259 i--~~a~l~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 259 I--AACKAIVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred H--HhCCEEEec-CChHHHHHHHhCCCEEEE
Confidence 6 789999996 345688899999999987
|
|
| >PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=84.19 E-value=2.4 Score=36.97 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCC--CEEE-ec-c-CChhhhhCCCCeeEEEecCChhhHHHHHHh----CC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKID--KILL-KS-W-APQRDILDHPNVKVFISHGGFLGTTEALYS----GV 103 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~--nv~~-~~-~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~~----gv 103 (244)
.+..+.+.+.+.+.+..+.+..........+. +... .+ + .+..++. ..++++|+=||=||+..|+.. ++
T Consensus 16 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dlvi~iGGDGTlL~aar~~~~~~i 93 (305)
T PRK02649 16 VRTAEELQDKLEAAGWEVVRASSSGGILGYANPDQPVCHTGIDQLVPPGFD--SSMKFAIVLGGDGTVLSAARQLAPCGI 93 (305)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcCccccccccccccccccChhhcc--cCcCEEEEEeCcHHHHHHHHHhcCCCC
Confidence 45566777777777766665322111101110 0000 00 0 1112222 468999999999999999774 78
Q ss_pred cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
|++++-.- .+|.. .+++.+++.++++++++++
T Consensus 94 PilGIN~G-------------~lGFL---t~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 94 PLLTINTG-------------HLGFL---TEAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred cEEEEeCC-------------CCccc---ccCCHHHHHHHHHHHHcCC
Confidence 99998431 12322 3456788999999998653
|
|
| >PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=83.75 E-value=9.8 Score=33.18 Aligned_cols=101 Identities=11% Similarity=0.067 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC-CCCC-CCC---CEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCC
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE-NMSG-KID---KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGV 103 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~-~~~~-~~~---nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gv 103 (244)
.+..+.+.+.+.+.+..+.+.-... .+.. .+. .+- ...++...-+. ..++++|+=||=||+..|+. .++
T Consensus 20 ~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~D~vi~lGGDGT~L~aar~~~~~~~ 97 (306)
T PRK03372 20 TEAARRVAKQLGDAGIGVRVLDAEAVDLGATHPAPDDFRA-MEVVDADPDAA-DGCELVLVLGGDGTILRAAELARAADV 97 (306)
T ss_pred HHHHHHHHHHHHHCCCEEEEeechhhhhcccccccccccc-cccccchhhcc-cCCCEEEEEcCCHHHHHHHHHhccCCC
Confidence 4566777777777676666532211 1110 000 000 11112211222 46899999999999999876 488
Q ss_pred cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
|++++..- .+|... +...+++.+++++++++.
T Consensus 98 PilGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 98 PVLGVNLG-------------HVGFLA---EAEAEDLDEAVERVVDRD 129 (306)
T ss_pred cEEEEecC-------------CCceec---cCCHHHHHHHHHHHHcCC
Confidence 99999641 133333 446788999999998653
|
|
| >PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=83.10 E-value=12 Score=32.51 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecC-CCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCCcEEe
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGVPIIG 107 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gvP~i~ 107 (244)
.+..+.+.+.+.+.+..+.+.-.. ..++ +.+. ...+..++- ..++++|+=||=||+.+++. .++|+++
T Consensus 19 ~e~~~~i~~~L~~~giev~v~~~~~~~~~--~~~~---~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlg 91 (295)
T PRK01231 19 VETLRRLKDFLLDRGLEVILDEETAEVLP--GHGL---QTVSRKLLG--EVCDLVIVVGGDGSLLGAARALARHNVPVLG 91 (295)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcC--cccc---cccchhhcc--cCCCEEEEEeCcHHHHHHHHHhcCCCCCEEE
Confidence 566777777777666665543211 1111 1111 122222222 46899999999999999975 3779998
Q ss_pred cCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 108 IPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 108 vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+..- .+|.. .+.+.+++.+++++++++
T Consensus 92 in~G-------------~lGFl---~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 92 INRG-------------RLGFL---TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred EeCC-------------ccccc---ccCCHHHHHHHHHHHHcC
Confidence 8651 13322 355789999999999864
|
|
| >PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=82.39 E-value=12 Score=32.29 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCCcEEec
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGVPIIGI 108 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gvP~i~v 108 (244)
.+..+.+.+.+.+.+..+.+.-......+ ..+ ....+..++. ..++++|+=||=||+..++. .++|++++
T Consensus 20 ~~~~~~i~~~l~~~g~~v~~~~~~~~~~~-~~~---~~~~~~~~~~--~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilgi 93 (292)
T PRK03378 20 LTTHEMLYHWLTSKGYEVIVEQQIAHELQ-LKN---VKTGTLAEIG--QQADLAIVVGGDGNMLGAARVLARYDIKVIGI 93 (292)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcC-ccc---ccccchhhcC--CCCCEEEEECCcHHHHHHHHHhcCCCCeEEEE
Confidence 45566676667666666554321110000 011 0011222332 46899999999999999975 37888888
Q ss_pred CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 109 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 109 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
-.-. +|.. .+++.+++.+++++++++
T Consensus 94 n~G~-------------lGFl---~~~~~~~~~~~l~~i~~g 119 (292)
T PRK03378 94 NRGN-------------LGFL---TDLDPDNALQQLSDVLEG 119 (292)
T ss_pred ECCC-------------CCcc---cccCHHHHHHHHHHHHcC
Confidence 4311 2332 244678899999999865
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=81.14 E-value=17 Score=31.90 Aligned_cols=154 Identities=16% Similarity=0.113 Sum_probs=79.8
Q ss_pred CceEEEEc---CCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCCCCCCEEEec-cCChhhhhCCCCeeEEEe
Q psy16503 15 NGVIYFSM---GSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKS-WAPQRDILDHPNVKVFIS 88 (244)
Q Consensus 15 ~~vI~vs~---Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~~~~nv~~~~-~~pq~~lL~h~~~~l~It 88 (244)
.+.|+.=+ |+..-..+-..+.+..+++.|...+ .|+.-..+. +..+.-.|+.+-+ -++..++| -.++++|+
T Consensus 182 ~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g-iV~ipr~~~~~eife~~~n~i~pk~~vD~l~Ll--yya~lvig 258 (346)
T COG1817 182 ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG-IVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLL--YYATLVIG 258 (346)
T ss_pred CceEEEeeccccceeeccccchhhHHHHHHHHHhCc-EEEecCchhHHHHHhhhccccCCcccccHHHHH--hhhheeec
Confidence 35666544 3333222223445677777777666 223222211 1122233333322 34556788 57889999
Q ss_pred cCChhhHHHHHHhCCcEEec-CCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 167 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~v-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~ 167 (244)
-||. .--||+..|+|.|.+ |- .--.--+.+.+.|.=..- .++.++.+...+.|.++..++. -..+
T Consensus 259 ~ggT-MarEaAlLGtpaIs~~pG--kll~vdk~lie~G~~~~s----~~~~~~~~~a~~~l~~~~~kK~-------~~~k 324 (346)
T COG1817 259 AGGT-MAREAALLGTPAISCYPG--KLLAVDKYLIEKGLLYHS----TDEIAIVEYAVRNLKYRRLKKT-------GVLK 324 (346)
T ss_pred CCch-HHHHHHHhCCceEEecCC--ccccccHHHHhcCceeec----CCHHHHHHHHHHHhhchhhccc-------cccc
Confidence 8775 567999999999987 32 122223455565554332 2344444444444444332211 1112
Q ss_pred CCChHHHHHHHHHHHHHc
Q psy16503 168 PMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 168 ~~~~~~~a~~~ie~~~~~ 185 (244)
..++.+..++.+|..++.
T Consensus 325 ~e~~~~~ii~~ve~~~e~ 342 (346)
T COG1817 325 LEDPTRLIIDVVEEMLET 342 (346)
T ss_pred cccHHHHHHHHHHHHhhh
Confidence 245677777777776654
|
|
| >PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
Probab=80.76 E-value=3.8 Score=35.47 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEecCC-CCCCC---CCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHH----hCCc
Q psy16503 33 SDKRKAFLRAFEQIPQRVIWKWEGE-NMSGK---IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY----SGVP 104 (244)
Q Consensus 33 ~~~~~~i~~al~~~~~~viw~~~~~-~~~~~---~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~----~gvP 104 (244)
.+..+.+.+.+.+.+..+++..... .+... .++. ....+..++. ..++++|+=||=||+..++. .++|
T Consensus 15 ~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~dlvi~lGGDGT~L~aa~~~~~~~~P 90 (292)
T PRK01911 15 SPYIQELFDELEERGAEVLIEEKFLDFLKQDLKFHPSY--DTFSDNEELD--GSADMVISIGGDGTFLRTATYVGNSNIP 90 (292)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhhcccccccccc--ccccchhhcc--cCCCEEEEECCcHHHHHHHHHhcCCCCC
Confidence 4556677777776676666532211 11000 0000 0010222332 46899999999999999887 3789
Q ss_pred EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCCh
Q psy16503 105 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 151 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~ 151 (244)
++++-.-. +|.. .+++.+++.+++++++++.
T Consensus 91 ilGIN~G~-------------lGFL---t~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 91 ILGINTGR-------------LGFL---ATVSKEEIEETIDELLNGD 121 (292)
T ss_pred EEEEecCC-------------CCcc---cccCHHHHHHHHHHHHcCC
Confidence 99984411 2322 3456788999999998653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 244 | ||||
| 2o6l_A | 170 | Crystal Structure Of The Udp-Glucuronic Acid Bindin | 2e-26 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 3e-12 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 4e-10 | ||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 1e-09 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 5e-09 | ||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 2e-07 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 2e-07 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 2e-07 | ||
| 4g2t_A | 397 | Crystal Structure Of Streptomyces Sp. Sf2575 Glycos | 3e-07 | ||
| 4fzr_A | 398 | Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575 | 4e-07 | ||
| 2iyf_A | 430 | The Crystal Structure Of Macrolide Glycosyltransfer | 1e-05 | ||
| 3iaa_A | 416 | Crystal Structure Of Calg2, Calicheamicin Glycosylt | 2e-05 | ||
| 3rsc_A | 415 | Crystal Structure Of Calg2, Calicheamicin Glycosylt | 3e-05 | ||
| 2p6p_A | 384 | X-Ray Crystal Structure Of C-C Bond-Forming Dtdp-D- | 5e-05 | ||
| 2yjn_A | 441 | Structure Of The Glycosyltransferase Eryciii From T | 7e-04 |
| >pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding Domain Of The Human Drug Metabolizing Udp-Glucuronosyltransferase 2b7 Length = 170 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|4G2T|A Chain A, Crystal Structure Of Streptomyces Sp. Sf2575 Glycosyltransferase Ssfs6, Complexed With Thymidine Diphosphate Length = 397 | Back alignment and structure |
|
| >pdb|4FZR|A Chain A, Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575 Glycosyltransferase Length = 398 | Back alignment and structure |
|
| >pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 430 | Back alignment and structure |
|
| >pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin Glycosyltransferase, Tdp Bound Form Length = 416 | Back alignment and structure |
|
| >pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form Length = 415 | Back alignment and structure |
|
| >pdb|2P6P|A Chain A, X-Ray Crystal Structure Of C-C Bond-Forming Dtdp-D-Olivose-Transferase Urdgt2 Length = 384 | Back alignment and structure |
|
| >pdb|2YJN|A Chain A, Structure Of The Glycosyltransferase Eryciii From The Erythromycin Biosynthetic Pathway, In Complex With Its Activating Partner, Erycii Length = 441 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 235 bits (603), Expect = 1e-79
Identities = 57/163 (34%), Positives = 96/163 (58%), Gaps = 3/163 (1%)
Query: 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI 63
+++ F+ S NGV+ FS+GS++ + ++ A QIPQ+V+W+++G
Sbjct: 10 EMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQKVLWRFDGNKPDTLG 67
Query: 64 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK 123
L W PQ D+L HP + FI+HGG G EA+Y G+P++GIP+F DQ NI ++
Sbjct: 68 LNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA 127
Query: 124 AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 166
G V + ++ ++ +L AL+ V+ +PSYK+ K++R+ D
Sbjct: 128 RGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVMKLSRIQHD 170
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 6e-51
Identities = 37/186 (19%), Positives = 67/186 (36%), Gaps = 12/186 (6%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW-----KWEGENMSGKIDKILLKS 70
V+ S+GS + +RAF +P + K + D + +
Sbjct: 233 KVVLVSLGSAFTK---QPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHD 289
Query: 71 WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL 130
W PQ IL +F++H G G+ E L + P+I +P DQ N +++ G L
Sbjct: 290 WVPQLAILRQA--DLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL 347
Query: 131 PYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGG--G 188
++ T + + ++ +P +R ++ + E RH
Sbjct: 348 ATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELPARHERQEP 407
Query: 189 AHLRPA 194
RP
Sbjct: 408 VGDRPN 413
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 2e-49
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKI----LLKSW 71
V+ ++GS D + L A + + V+ + ++ + W
Sbjct: 256 PVLLIALGSAFTD---HLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQW 312
Query: 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLP 131
PQ DIL FI+H G T EAL + VP++ +P +Q N + + G G +P
Sbjct: 313 VPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIP 370
Query: 132 YDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGG 187
DQ+T E + A+ V +P +R V + ++ A +E ++ G
Sbjct: 371 RDQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE--AGGARAAADILEGILAEAG 424
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 5e-42
Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 12/177 (6%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKI----LLKSW 71
V+ S+G+ + +A +AF P V+ G + + W
Sbjct: 232 PVLLVSLGNQFNE---HPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQW 288
Query: 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKAGFGVTL 130
P +L H + ++HG EA +GVP++ +P F + + V + G G L
Sbjct: 289 IPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL 346
Query: 131 PYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGG 187
DQ+ ++ A+ + + + ++R ++ R A +E +
Sbjct: 347 RPDQLEPASIREAVERLAADSAVRERVRRMQRDILS--SGGPARAADEVEAYLGRVA 401
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 2e-38
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 11/174 (6%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKI----LLKSWA 72
V+ S+G+ + RAF+ P V+ G+ + + W
Sbjct: 249 VVLVSLGTTFND---RPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWV 305
Query: 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132
P +L V ++HGG EALY G P++ +P D + R V++ G G LP
Sbjct: 306 PHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPG 363
Query: 133 DQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHG 186
++ +T+L A+ V +P+ R E + + A +E +
Sbjct: 364 EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR--AGGAARAADAVEAYLARA 415
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-33
Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 7/172 (4%)
Query: 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI---DKILLKSWA 72
+ ++G + S + L A + +I ++ + + G D + +
Sbjct: 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFV 327
Query: 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132
P +L P + HGG A GVP + +P D + ++ G G+ LP
Sbjct: 328 PMHALL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPV 385
Query: 133 DQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
++T + + +++ VL +P+++ A ++ P + E +
Sbjct: 386 PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA--EPSPAEVVGICEELAA 435
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 7e-33
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 11/176 (6%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVI----WKWEGENMSGKIDKILLKSWA 72
++Y ++G+ G + +A + + V+ + + + L+SW
Sbjct: 244 LVYLTLGTSSGG---TVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWV 300
Query: 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132
PQ +L P+V + + HGG T AL +GVP + P GD AN + V +AG G L
Sbjct: 301 PQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLP 358
Query: 133 DQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGG 188
D I+ ++V A + +L SY+ A VA MP D + + G
Sbjct: 359 DNISPDSVSGAAKRLLAEESYRAGARAVAAEI--AAMPGPDEVVRLLPGFASRSAG 412
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 3e-30
Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
Query: 17 VIYFSMGSIIQGKSFPSDKR--KAFLRAFEQIPQRVIWK--WEGENMSGKIDKILLKSWA 72
+ + GS + +S+ + + + + +I W
Sbjct: 212 RVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARVGWT 271
Query: 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132
P + P + + H G + T L +GVP + IP +A R V G + L
Sbjct: 272 PLDVVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLP 329
Query: 133 DQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAH 190
+ + E + + + + +Y +RA+ ++R MP T + +E + H H
Sbjct: 330 GEDSTEAIADSCQELQAKDTYARRAQDLSREI--SGMPLPATVVTALEQLAHH-HHHH 384
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-28
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 12/173 (6%)
Query: 17 VIYFSMGSIIQ---GKSFPSDKR--KAFLRAFEQIPQRVIW---KWEGENMSGKIDKILL 68
+ + G+ + + P +A + ++ V+ + + + +L
Sbjct: 229 RLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLA 288
Query: 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 128
P I+ P V + HGG T L GVP + +P+ + + R++ AG GV
Sbjct: 289 AGQFPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGV 346
Query: 129 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 181
+P++Q E+VL A + + SY A ++A +P + IE
Sbjct: 347 EVPWEQAGVESVLAACARIRDDSSYVGNARRLAAEM--ATLPTPADIVRLIEQ 397
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-28
Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 9/174 (5%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW---KWEGENMSGKIDKILLKSWAP 73
+ MG ++ + P+ +A A E + ++ D + P
Sbjct: 220 RVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNARIAESVP 279
Query: 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133
L ++ I GG A G+P + +P + DQ R + AG G+ LP +
Sbjct: 280 LNLFL--RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDE 337
Query: 134 QIT--EETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 185
Q E ++ TVLG+ + A K++ MP + +E+
Sbjct: 338 QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEI--TAMPHPAALVRTLENTAAI 389
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-26
Identities = 43/183 (23%), Positives = 63/183 (34%), Gaps = 12/183 (6%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW--KWEGENMSGK 62
++ FLD +Y GS+ P+D + + A +RVI W +
Sbjct: 229 ELAAFLDAG-PPPVYLGFGSL----GAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDD 283
Query: 63 IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 122
+ + V I HGG T A +G P I +P DQ V
Sbjct: 284 GADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVA 341
Query: 123 KAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHV 182
+ G GV T +++ AL T L P RA VA + A ++ V
Sbjct: 342 ELGVGVAHDGPIPTFDSLSAALATAL-TPETHARATAVAGTIRTD--GAAVAARLLLDAV 398
Query: 183 IRH 185
R
Sbjct: 399 SRE 401
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-25
Identities = 45/194 (23%), Positives = 66/194 (34%), Gaps = 19/194 (9%)
Query: 5 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVI--WKWEGENMSGK 62
+++ FL + ++ GS +D K + A +RVI W +
Sbjct: 228 ELEAFLAAG-SPPVHIGFGSSSGRG--IADAAKVAVEAIRAQGRRVILSRGWTELVLPDD 284
Query: 63 IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 122
D + + V I HG A +GVP + IP DQ V
Sbjct: 285 RDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVA 342
Query: 123 KAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD-----------RPMPP 171
G GV T E++ AL TVL P + RAE VA + +
Sbjct: 343 ALGIGVAHDGPTPTFESLSAALTTVL-APETRARAEAVAGMVLTDGAAAAADLVLAAVGR 401
Query: 172 LDTAIYWIEHVIRH 185
A+ +EH H
Sbjct: 402 EKPAVPALEHHHHH 415
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 3e-24
Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGENMSGKI-DKILLKSWAP 73
+ +MG+I + ++F + + A ++ + + G + + W P
Sbjct: 234 EVAITMGTI-ELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTP 292
Query: 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133
+L + HGG A+ +G+P + P DQ + + G+ L
Sbjct: 293 LHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVST 350
Query: 134 QITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMP 170
+++ LR ++G+ S + A +V P P
Sbjct: 351 --SDKVDADLLRRLIGDESLRTAAREVREEMVALPTP 385
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 5e-17
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW----KWEGENMSGKIDKI----LL 68
V+Y S GS++ + P + A + E+ IW + + G +++ +
Sbjct: 275 VVYISFGSVV---TPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKI 331
Query: 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAGFG 127
+WAPQ +IL H +V VF++H G+ E + GVP+I P FGDQ N G
Sbjct: 332 VAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391
Query: 128 VTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
V + +T+E++ AL + + +K+ +L
Sbjct: 392 VGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKL 427
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 6e-17
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW----KWEGENMSGKIDKI----LL 68
V+Y S G++ + P + A A E IW K G ++K ++
Sbjct: 273 VVYISFGTVT---TPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMV 329
Query: 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAGFG 127
WAPQ ++L H V F++H G+ E++ GVP+I P FGDQ+ N R V + G
Sbjct: 330 VPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389
Query: 128 VTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
V + T+ ++ +L KK E + L
Sbjct: 390 VRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRAL 425
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 3e-16
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW------KW--EG--ENMSGKIDKI 66
V++ GS+ G SF + + + R +W K EG E M + K
Sbjct: 278 VVFLCFGSM--GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELE-GKG 334
Query: 67 LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAG 125
++ WAPQ ++L H + F+SH G+ E+++ GVPI+ P++ +Q+ N +V++ G
Sbjct: 335 MICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWG 394
Query: 126 FGVTLPYDQITEETV 140
G+ L D V
Sbjct: 395 VGLGLRVDYRKGSDV 409
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 5e-16
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 67 LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAG 125
L+ SW PQ +L+HP++ F++H G+ TTE++ +GVP++ P F DQ + R + +
Sbjct: 356 LIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWE 415
Query: 126 FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
G+ + + + E + + V+ KK +K L
Sbjct: 416 IGMEIDTN-VKREELAKLINEVIAGDKGKKMKQKAMEL 452
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 4e-15
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 67 LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR-VVEKAG 125
++ WAPQ +L HP+ F++H G+ T E++ SG+P+I P++ +QK N + E
Sbjct: 342 VIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIR 401
Query: 126 FGVTLPYDQ---ITEETVLVALRTVLGNPSYKKRAEKVARL 163
+ + E V ++ ++ K K+ L
Sbjct: 402 AALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKEL 442
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 244 | |||
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 99.98 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 99.98 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 99.98 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.97 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.97 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.96 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.96 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.96 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.95 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.95 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.94 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.93 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.93 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.92 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.91 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.91 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.89 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.84 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.71 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.53 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.39 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.84 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 98.82 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.8 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.68 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 98.62 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 98.62 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.61 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 98.53 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 98.52 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 98.38 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 98.37 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.36 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 98.34 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 98.3 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.3 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 98.23 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 98.21 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 98.2 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.13 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 98.09 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 97.93 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 97.91 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.9 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 97.73 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 97.71 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 97.61 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.4 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 97.26 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 97.14 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 95.23 | |
| 2iz6_A | 176 | Molybdenum cofactor carrier protein; metal transpo | 93.98 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 93.49 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 93.25 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 93.15 | |
| 1rcu_A | 195 | Conserved hypothetical protein VT76; structural ge | 92.58 | |
| 1ydh_A | 216 | AT5G11950; structural genomics, protein structure | 88.24 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 87.5 | |
| 3qua_A | 199 | Putative uncharacterized protein; structural genom | 87.36 | |
| 3sbx_A | 189 | Putative uncharacterized protein; structural genom | 87.04 | |
| 1t35_A | 191 | Hypothetical protein YVDD, putative lysine decarbo | 84.82 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 84.79 | |
| 2i2c_A | 272 | Probable inorganic polyphosphate/ATP-NAD kinase 1; | 83.69 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 83.59 |
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=257.13 Aligned_cols=187 Identities=19% Similarity=0.323 Sum_probs=153.9
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---------------C-CCCCCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---------------M-SGKIDK 65 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---------------~-~~~~~n 65 (244)
|+++.+|+++. ++++|||||||... .+.+.+.+++++|+..+++|+|+++... + ...|+|
T Consensus 255 ~~~~~~wLd~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 331 (480)
T 2vch_A 255 ESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPG 331 (480)
T ss_dssp -CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTT
T ss_pred hhHHHHHhcCCCCCceEEEecccccC---CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHH
Confidence 45789999986 47999999999964 5778899999999999999999987532 1 135666
Q ss_pred E---------EEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeecCCC--
Q psy16503 66 I---------LLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTLPYD-- 133 (244)
Q Consensus 66 v---------~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l~~~-- 133 (244)
+ .+.+|+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++ ++.|+|+.++..
T Consensus 332 ~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~ 411 (480)
T 2vch_A 332 FLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 411 (480)
T ss_dssp HHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred HHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccC
Confidence 4 4555999999999999999999999999999999999999999999999999997 688999999875
Q ss_pred -CCCHHHHHHHHHHHhC---ChhHHHHHHHHHHHHhC---CCCChHHHHHHHHHHHHHcCCCCCCCcc
Q psy16503 134 -QITEETVLVALRTVLG---NPSYKKRAEKVARLFQD---RPMPPLDTAIYWIEHVIRHGGGAHLRPA 194 (244)
Q Consensus 134 -~~~~~~l~~ai~~ll~---~~~y~~~a~~~s~~~~~---~~~~~~~~a~~~ie~~~~~~~~~~l~~~ 194 (244)
.++.++|.++|+++|. +++||++|+++++.++. ...+........++.+.+ +.++++.+
T Consensus 412 ~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~--~~~~~~~~ 477 (480)
T 2vch_A 412 GLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA--HKKELEQN 477 (480)
T ss_dssp SCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH--HHHHHHC-
T ss_pred CccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH--hHHHhhhc
Confidence 7899999999999998 78899999999998876 333334445556666543 44555443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=248.11 Aligned_cols=161 Identities=29% Similarity=0.521 Sum_probs=145.7
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCC-----CCCCEEEeccCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSG-----KIDKILLKSWAP 73 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~-----~~~nv~~~~~~p 73 (244)
++++.+||+.. ++++|||||||... ++.+.+.+++.+|+..+++|+|+++... ++. .++|+++.+|+|
T Consensus 260 ~~~~~~wLd~~~~~~vVyvsfGS~~~---~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~P 336 (454)
T 3hbf_A 260 EHGCLEWLDQHENSSVVYISFGSVVT---PPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAP 336 (454)
T ss_dssp TTCHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCC
T ss_pred hHHHHHHHhcCCCCceEEEecCCCCc---CCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCC
Confidence 45789999986 47999999999965 6778899999999999999999998632 222 357899999999
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHhCCh-
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVLGNP- 151 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll~~~- 151 (244)
|.++|.|+.+++||||||+||+.|++++|||+|++|+++||+.||+++++. |+|+.++...++.++|.++|+++|.++
T Consensus 337 q~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~ 416 (454)
T 3hbf_A 337 QVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEK 416 (454)
T ss_dssp HHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHH
T ss_pred HHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCCh
Confidence 999999999999999999999999999999999999999999999999995 999999888899999999999999887
Q ss_pred --hHHHHHHHHHHHHhC
Q psy16503 152 --SYKKRAEKVARLFQD 166 (244)
Q Consensus 152 --~y~~~a~~~s~~~~~ 166 (244)
+||++|+++++.+++
T Consensus 417 ~~~~r~~a~~l~~~~~~ 433 (454)
T 3hbf_A 417 GGIMRQKIVKLKESAFK 433 (454)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 799999999998875
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-31 Score=210.83 Aligned_cols=162 Identities=35% Similarity=0.739 Sum_probs=143.9
Q ss_pred chHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCCCCCCCEEEeccCChhhhhCCC
Q psy16503 3 ETDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP 81 (244)
Q Consensus 3 p~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~ 81 (244)
|+++.+|++.. ++++|||++||... ..+.+.+..+++++.+.+.+++|..++......++|+.+.+|+|+.+++.|+
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~ 85 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHP 85 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTST
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCC
Confidence 67899999875 46899999999952 3578889999999998889999999865444567899999999999999999
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
.+++||||||.+|+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|.++++|++|++++++++
T Consensus 86 ~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~ 165 (170)
T 2o6l_A 86 KTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVMKLS 165 (170)
T ss_dssp TEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred CcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHhC
Q psy16503 162 RLFQD 166 (244)
Q Consensus 162 ~~~~~ 166 (244)
+.+++
T Consensus 166 ~~~~~ 170 (170)
T 2o6l_A 166 RIQHD 170 (170)
T ss_dssp -----
T ss_pred HHhhC
Confidence 88764
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.5e-32 Score=244.40 Aligned_cols=159 Identities=25% Similarity=0.460 Sum_probs=143.8
Q ss_pred HHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCC-----CCCCEEEeccCChh
Q psy16503 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSG-----KIDKILLKSWAPQR 75 (244)
Q Consensus 5 ~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~-----~~~nv~~~~~~pq~ 75 (244)
++.+|++.. ++++|||||||... .+.+.+.+++++|+..+.+|+|+++... ++. .++|+++.+|+||.
T Consensus 260 ~~~~wl~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~ 336 (456)
T 2c1x_A 260 GCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA 336 (456)
T ss_dssp CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH
T ss_pred hHHHHHhcCCCcceEEEecCcccc---CCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH
Confidence 578999976 47899999999965 4678899999999988899999998642 222 25689999999999
Q ss_pred hhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc-CceeecCCCCCCHHHHHHHHHHHhCCh---
Q psy16503 76 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLVALRTVLGNP--- 151 (244)
Q Consensus 76 ~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ai~~ll~~~--- 151 (244)
++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++++. |+|+.++..+++.++|.++|+++|.|+
T Consensus 337 ~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~ 416 (456)
T 2c1x_A 337 EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGK 416 (456)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHH
T ss_pred HHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHH
Confidence 9999999999999999999999999999999999999999999999999 999999888899999999999999987
Q ss_pred hHHHHHHHHHHHHhC
Q psy16503 152 SYKKRAEKVARLFQD 166 (244)
Q Consensus 152 ~y~~~a~~~s~~~~~ 166 (244)
+||++|+++++.+++
T Consensus 417 ~~r~~a~~l~~~~~~ 431 (456)
T 2c1x_A 417 KLRENLRALRETADR 431 (456)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999999875
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.4e-31 Score=244.45 Aligned_cols=158 Identities=23% Similarity=0.496 Sum_probs=141.7
Q ss_pred HHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-------CCC-----CCCCEEEecc
Q psy16503 5 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------MSG-----KIDKILLKSW 71 (244)
Q Consensus 5 ~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-------~~~-----~~~nv~~~~~ 71 (244)
++.+|+++. ++++|||||||... ++.+.+.+++++|+..+++|+|+++.+. ++. .++|+++.+|
T Consensus 284 ~~~~wld~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~ 360 (482)
T 2pq6_A 284 ECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASW 360 (482)
T ss_dssp HHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESC
T ss_pred HHHHHHhcCCCCceEEEecCCccc---CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEee
Confidence 478999986 47899999999853 5667789999999999999999987531 221 2579999999
Q ss_pred CChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHH-HcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 72 ~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~-~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+||.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||++++ +.|+|+.++ .+++.++|.++|+++|.|
T Consensus 361 ~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~ 439 (482)
T 2pq6_A 361 CPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAG 439 (482)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTS
T ss_pred cCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999997 689999998 689999999999999999
Q ss_pred h---hHHHHHHHHHHHHhC
Q psy16503 151 P---SYKKRAEKVARLFQD 166 (244)
Q Consensus 151 ~---~y~~~a~~~s~~~~~ 166 (244)
+ +||++|+++++.+++
T Consensus 440 ~~~~~~r~~a~~l~~~~~~ 458 (482)
T 2pq6_A 440 DKGKKMKQKAMELKKKAEE 458 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 8 699999999999875
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-31 Score=240.89 Aligned_cols=161 Identities=24% Similarity=0.454 Sum_probs=142.7
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCC-----C--CCCEEEeccCC
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSG-----K--IDKILLKSWAP 73 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~-----~--~~nv~~~~~~p 73 (244)
+++.+|++.. ++++|||+|||... .++.+.+.+++++|+..+++|+|+++.+ .++. . ++|+++.+|+|
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~p 341 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAP 341 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCC
T ss_pred hhHHHHHhcCCCCceEEEEeccccc--cCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCC
Confidence 4788999986 47899999999962 3677889999999999899999999863 2332 1 67899999999
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeec-C---CC--CCCHHHHHHHHHH
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTL-P---YD--QITEETVLVALRT 146 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l-~---~~--~~~~~~l~~ai~~ 146 (244)
|.++|.|+.+++||||||+||+.||+++|||+|++|+++||+.||+++ ++.|+|+.+ + .+ .++.++|.++|++
T Consensus 342 q~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ 421 (463)
T 2acv_A 342 QVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKD 421 (463)
T ss_dssp HHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHH
T ss_pred HHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 899999999 3 34 6899999999999
Q ss_pred HhC-ChhHHHHHHHHHHHHhC
Q psy16503 147 VLG-NPSYKKRAEKVARLFQD 166 (244)
Q Consensus 147 ll~-~~~y~~~a~~~s~~~~~ 166 (244)
+|+ +++||++|+++++.+++
T Consensus 422 ll~~~~~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 422 LMDKDSIVHKKVQEMKEMSRN 442 (463)
T ss_dssp HTCTTCTHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHH
Confidence 997 47999999999998875
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=233.98 Aligned_cols=181 Identities=23% Similarity=0.233 Sum_probs=155.0
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++.+|++..+ ++|||++||.. .+.+..+.++++++..+.+++|.++... ....++|+.+.+|+||.++|
T Consensus 227 ~~~~~~~l~~~~-~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l-- 299 (415)
T 1iir_A 227 SPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF-- 299 (415)
T ss_dssp CHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHG--
T ss_pred CHHHHHHHhhCC-CeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCChHHHH--
Confidence 467899998654 89999999984 3678889999999999999999877532 23456799999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++++||||||+||+.||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ .|++|+++++++
T Consensus 300 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~ 378 (415)
T 1iir_A 300 GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPETHARATAV 378 (415)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHHHHHHHHH
T ss_pred hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999998889999999999999 999999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHcCCCCCCCc
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRP 193 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~l~~ 193 (244)
++.++. .++.+++++++|.+++++|.+|+-.
T Consensus 379 ~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~ 409 (415)
T 1iir_A 379 AGTIRT--DGAAVAARLLLDAVSREKPTVSALE 409 (415)
T ss_dssp HHHSCS--CHHHHHHHHHHHHHHTC--------
T ss_pred HHHHhh--cChHHHHHHHHHHHHhcccHHHHhh
Confidence 999876 7889999999999999999888743
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=232.54 Aligned_cols=181 Identities=23% Similarity=0.182 Sum_probs=155.4
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC--CCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~--~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++.+|++..+ ++|||++||... ..+.+.++.++++++..+.+++|.++.... ...++|+.+.+|+||.++|
T Consensus 226 ~~~~~~~l~~~~-~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll-- 300 (416)
T 1rrv_A 226 PPELEAFLAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF-- 300 (416)
T ss_dssp CHHHHHHHHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--
T ss_pred CHHHHHHHhcCC-CeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHh--
Confidence 567899998654 899999999842 135678889999999999999999876432 3467899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+.+++||||||+||+.||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ .|++|+++++++
T Consensus 301 ~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~ 379 (416)
T 1rrv_A 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAV 379 (416)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHH
T ss_pred ccCCEEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999988889999999999999 999999999999
Q ss_pred HHHHhCCCCChHHHHHHHH-HHHHHcCCCCCCC
Q psy16503 161 ARLFQDRPMPPLDTAIYWI-EHVIRHGGGAHLR 192 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~i-e~~~~~~~~~~l~ 192 (244)
++.+.+ .++. ++++++ |+++++++.+|+-
T Consensus 380 ~~~~~~--~~~~-~~~~~i~e~~~~~~~~~~~~ 409 (416)
T 1rrv_A 380 AGMVLT--DGAA-AAADLVLAAVGREKPAVPAL 409 (416)
T ss_dssp TTTCCC--CHHH-HHHHHHHHHHHC--------
T ss_pred HHHHhh--cCcH-HHHHHHHHHHhccCCCCcch
Confidence 999986 6677 999999 9999999888764
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=223.53 Aligned_cols=167 Identities=20% Similarity=0.278 Sum_probs=138.6
Q ss_pred HHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 7 KKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 7 ~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
..|++.. ++++|||+|||....+. ..+.+..+++++.+.+..++|..++.. ....|+|+.+.+|+||.++| +.
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~-~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL--~~ 304 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSG-GIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALL--ET 304 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CC-SSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHH--TT
T ss_pred cccccccCCCcEEEEeCCcccccCc-cHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHh--hh
Confidence 3466554 37899999999865322 235677889999999999999887632 34578999999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
+++||||||+||+.||+++|||+|++|+++||+.||+++++.|+|+.++..+.+.+ +|+++|+|++||++|+++++
T Consensus 305 ~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~----al~~lL~d~~~r~~a~~l~~ 380 (400)
T 4amg_A 305 CDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAE----QCRRLLDDAGLREAALRVRQ 380 (400)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHH----HHHHHHHCHHHHHHHHHHHH
T ss_pred hhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHH----HHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777664 67788999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~ 182 (244)
.++++| +...++.++|.+
T Consensus 381 ~~~~~~--~~~~~a~~le~l 398 (400)
T 4amg_A 381 EMSEMP--PPAETAAXLVAL 398 (400)
T ss_dssp HHHTSC--CHHHHHHHHHHH
T ss_pred HHHcCC--CHHHHHHHHHHh
Confidence 999965 457778888865
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.9e-28 Score=214.68 Aligned_cols=173 Identities=24% Similarity=0.373 Sum_probs=152.0
Q ss_pred HHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 8 KFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 8 ~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
+|++.. ++++|||++||... ...+.+..+++++...+.+++|.++... +...++|+.+.+|+||.++| +.
T Consensus 247 ~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~ 321 (424)
T 2iya_A 247 TWEGPGDGRPVLLIALGSAFT---DHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDIL--TK 321 (424)
T ss_dssp CCCCCCSSCCEEEEECCSSSC---CCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHH--TT
T ss_pred CCCccCCCCCEEEEEcCCCCc---chHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHHH--hh
Confidence 465533 46899999999962 4678889999999887889999887522 23467899999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
+++||||||+||+.||+++|+|+|++|.+.||..||+++++.|+|+.++.++++.++|.++|+++++|++|+++++++++
T Consensus 322 ~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 401 (424)
T 2iya_A 322 ASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQ 401 (424)
T ss_dssp CSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHHHHcCC
Q psy16503 163 LFQDRPMPPLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~ie~~~~~~~ 187 (244)
.+++ .++.+++++++|.+++..|
T Consensus 402 ~~~~--~~~~~~~~~~i~~~~~~~~ 424 (424)
T 2iya_A 402 EIRE--AGGARAAADILEGILAEAG 424 (424)
T ss_dssp HHHT--SCHHHHHHHHHHHHHHHC-
T ss_pred HHHh--cCcHHHHHHHHHHHHhccC
Confidence 9987 5789999999999886543
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=215.65 Aligned_cols=177 Identities=18% Similarity=0.301 Sum_probs=153.8
Q ss_pred hHHHHHHhc-CCCceEEEEcCCCCCCCCC--CHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhh
Q psy16503 4 TDIKKFLDE-SVNGVIYFSMGSIIQGKSF--PSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDI 77 (244)
Q Consensus 4 ~~l~~~l~~-~~~~vI~vs~Gs~~~~~~~--~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~l 77 (244)
.++.+|++. .++++|||++||......+ +.+.+..+++++.+.+.+++|..++.. +...++|+.+ +|+|+.++
T Consensus 198 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~ 276 (384)
T 2p6p_A 198 CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVV 276 (384)
T ss_dssp CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHH
T ss_pred CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHH
Confidence 345678876 3468999999999653111 346678889999888889999887521 1234779999 99999999
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
| +.+++||||||.||+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|++++.|+++++++
T Consensus 277 l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 354 (384)
T 2p6p_A 277 A--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRA 354 (384)
T ss_dssp G--GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred H--hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 9 78999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 158 EKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 158 ~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+++++.+++ .++.+++++|++.++.|
T Consensus 355 ~~~~~~~~~--~~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 355 QDLSREISG--MPLPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHHHT--SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--CCCHHHHHHHHHHHhhh
Confidence 999999998 56899999999999876
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=215.19 Aligned_cols=178 Identities=17% Similarity=0.284 Sum_probs=148.6
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhC
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILD 79 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~ 79 (244)
.++.+|++.. ++++|||++||.......+.+.+..+++++...+.+++|..++.. +...++|+.+.+|+|+.++|
T Consensus 255 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll- 333 (441)
T 2yjn_A 255 SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALL- 333 (441)
T ss_dssp CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHG-
T ss_pred cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHH-
Confidence 4566788753 468999999998642000234566778888888889999988643 33457899999999999998
Q ss_pred CCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHH
Q psy16503 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 159 (244)
Q Consensus 80 h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~ 159 (244)
+.+++||||||.||+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|+++++|++|++++++
T Consensus 334 -~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 412 (441)
T 2yjn_A 334 -PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAAR 412 (441)
T ss_dssp -GGCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -hhCCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 160 VARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 160 ~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+++.+.+ .++.+++++.+|.+++.
T Consensus 413 ~~~~~~~--~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 413 MRDDMLA--EPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHT--SCCHHHHHHHHHHHHHC
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHHh
Confidence 9999988 56789999999988765
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=200.64 Aligned_cols=164 Identities=24% Similarity=0.366 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEec
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFISH 89 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ith 89 (244)
++++||+++||... ...+.+..+++++.+.+.+++|.+++. .+...++|+.+.+|+|+.++| +.+|++|||
T Consensus 246 ~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~ 320 (415)
T 3rsc_A 246 DLPVVLVSLGTTFN---DRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVL--EQATVCVTH 320 (415)
T ss_dssp CCCEEEEECTTTSC---CCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHH--HHEEEEEES
T ss_pred CCCEEEEECCCCCC---ChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHH--hhCCEEEEC
Confidence 46899999999854 346788999999999899999988753 234567899999999999999 679999999
Q ss_pred CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCC
Q psy16503 90 GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPM 169 (244)
Q Consensus 90 gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~ 169 (244)
||.+|+.||+++|+|+|++|...||..||+++++.|+|+.+..++++.++|.++|+++++|++++++++++++.+.+ .
T Consensus 321 ~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~--~ 398 (415)
T 3rsc_A 321 GGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEAMRGHVRR--A 398 (415)
T ss_dssp CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH--S
T ss_pred CcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh--c
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999988 5
Q ss_pred ChHHHHHHHHHHHHH
Q psy16503 170 PPLDTAIYWIEHVIR 184 (244)
Q Consensus 170 ~~~~~a~~~ie~~~~ 184 (244)
.+.++++++++.+++
T Consensus 399 ~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 399 GGAARAADAVEAYLA 413 (415)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh
Confidence 789999999998764
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=199.23 Aligned_cols=173 Identities=21% Similarity=0.332 Sum_probs=134.2
Q ss_pred hHHHHHHhcC-CCceEEEEcCCCCCCCCC-----CHHHHHHHHHHHhcCCCeEEEEecCC---CCCCCCCCEEEeccCCh
Q psy16503 4 TDIKKFLDES-VNGVIYFSMGSIIQGKSF-----PSDKRKAFLRAFEQIPQRVIWKWEGE---NMSGKIDKILLKSWAPQ 74 (244)
Q Consensus 4 ~~l~~~l~~~-~~~vI~vs~Gs~~~~~~~-----~~~~~~~i~~al~~~~~~viw~~~~~---~~~~~~~nv~~~~~~pq 74 (244)
.++..|+... ++++||+++|+....... +.+.+..+++++.+.+.+++|..++. .+...++|+.+.+|+|+
T Consensus 215 ~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~ 294 (398)
T 4fzr_A 215 DQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPL 294 (398)
T ss_dssp CCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCH
T ss_pred CCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCH
Confidence 4566777654 468999999999643210 34567889999998888999988763 23456889999999999
Q ss_pred hhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 75 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 75 ~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
.++| +.+++||||||.+|+.||+++|+|+|++|..+||..|+.++++.|+|+.++.++++.+.|.++|+++++|++++
T Consensus 295 ~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 372 (398)
T 4fzr_A 295 SAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYV 372 (398)
T ss_dssp HHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred HHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 9999 66999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 155 KRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 155 ~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+++.+.++.+.+. .+.++++..+|
T Consensus 373 ~~~~~~~~~~~~~--~~~~~~~~~l~ 396 (398)
T 4fzr_A 373 GNARRLAAEMATL--PTPADIVRLIE 396 (398)
T ss_dssp HHHHHHHHHHTTS--CCHHHHHHHHT
T ss_pred HHHHHHHHHHHcC--CCHHHHHHHHh
Confidence 9999999999884 45777776665
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-24 Score=189.32 Aligned_cols=165 Identities=19% Similarity=0.280 Sum_probs=148.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEec
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFISH 89 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~Ith 89 (244)
++++|++++||... ...+.+..+++++.+.+.+++|.+++. .+...++|+.+.+|+|+.++| +.+|++|||
T Consensus 230 ~~~~v~v~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll--~~ad~~v~~ 304 (402)
T 3ia7_A 230 DAPVLLVSLGNQFN---EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVL--AHARACLTH 304 (402)
T ss_dssp TCCEEEEECCSCSS---CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHH--TTEEEEEEC
T ss_pred CCCEEEEECCCCCc---chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHH--hhCCEEEEC
Confidence 36899999999954 345788999999998888999988753 234467899999999999999 779999999
Q ss_pred CChhhHHHHHHhCCcEEecCC-CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 90 GGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 90 gG~~s~~Eal~~gvP~i~vP~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
||.+|+.||+++|+|+|++|. ..||..|++++++.|+|+.+..++++.+.|.++++++++|++++++++++++.+.+
T Consensus 305 ~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~-- 382 (402)
T 3ia7_A 305 GTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVRRMQRDILS-- 382 (402)
T ss_dssp CCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT--
T ss_pred CCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh--
Confidence 999999999999999999999 99999999999999999999988889999999999999999999999999999988
Q ss_pred CChHHHHHHHHHHHHHc
Q psy16503 169 MPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~~ 185 (244)
..+.+++++.++.+++.
T Consensus 383 ~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 383 SGGPARAADEVEAYLGR 399 (402)
T ss_dssp SCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhh
Confidence 57899999999988753
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.2e-25 Score=193.69 Aligned_cols=174 Identities=20% Similarity=0.248 Sum_probs=148.4
Q ss_pred HHHHHhcC-CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCC---CCCCCCCCEEEeccCChhhhhCC
Q psy16503 6 IKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGE---NMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 6 l~~~l~~~-~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~---~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
+..|+... ++++|++++||.......+.+.++.++++ .+. +.+++|..++. .+...++|+.+.+|+|+.++|
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll-- 284 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFL-- 284 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTG--
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHH--
Confidence 33555543 46899999999843222346788889998 888 56899988763 344568899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC--CCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY--DQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~--~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
+.+|+||||||.+|+.||+++|+|+|++|...||..|+.++++.|+|+.+.. ++.+.+.|.++++++++|+++++++.
T Consensus 285 ~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~ 364 (391)
T 3tsa_A 285 RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAI 364 (391)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHH
T ss_pred hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999987 67889999999999999999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++.+.+ ..+.+++++++|.+++
T Consensus 365 ~~~~~~~~--~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 365 KLSDEITA--MPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHT--SCCHHHHHHHHHHC--
T ss_pred HHHHHHHc--CCCHHHHHHHHHHHHh
Confidence 99999988 4567899999987664
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-24 Score=192.29 Aligned_cols=169 Identities=17% Similarity=0.273 Sum_probs=143.8
Q ss_pred HHHHhc-CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---CCCCCCCEEEeccCChhhhhCCCC
Q psy16503 7 KKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 82 (244)
Q Consensus 7 ~~~l~~-~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~lL~h~~ 82 (244)
..|+.. .++++||+++||..... .+.+.+..+++++.+.+.+++|..++.. +...++|+.+.+|+|+.++| +.
T Consensus 223 ~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ 299 (398)
T 3oti_A 223 GDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLL--RT 299 (398)
T ss_dssp CSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHH--TT
T ss_pred chhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHH--hh
Confidence 344443 34689999999994310 1346678889999888889999988643 34568899999999999999 66
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHH--HHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI--RVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na--~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++||||||.||+.||+++|+|+|++|.++||..|+ .++++.|+|+.++.++.+.+.|. ++++|+++++++++.
T Consensus 300 ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~~~~~~~~ 375 (398)
T 3oti_A 300 CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESLRTAAREV 375 (398)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999988878887777 888999999999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
++.+.+ ..+.++++.++|.+++
T Consensus 376 ~~~~~~--~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 376 REEMVA--LPTPAETVRRIVERIS 397 (398)
T ss_dssp HHHHHT--SCCHHHHHHHHHHHHC
T ss_pred HHHHHh--CCCHHHHHHHHHHHhc
Confidence 999998 4568899999987753
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=187.23 Aligned_cols=165 Identities=20% Similarity=0.339 Sum_probs=142.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCeEEEEecCC----CCCCCCCCEEEeccCChhhhhCCCCeeEEEe
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGE----NMSGKIDKILLKSWAPQRDILDHPNVKVFIS 88 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~~~viw~~~~~----~~~~~~~nv~~~~~~pq~~lL~h~~~~l~It 88 (244)
++++||+++||.. ....+.+..++++++.. +.+++|.++.. .+...++|+.+.+|+|+.++| +.+++||+
T Consensus 231 ~~~~v~v~~Gs~~---~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~ 305 (430)
T 2iyf_A 231 AEKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAIL--RQADLFVT 305 (430)
T ss_dssp CSEEEEEECTTTC---C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHH--TTCSEEEE
T ss_pred CCCeEEEEcCCCC---CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHh--hccCEEEE
Confidence 3679999999995 24678889999999886 66888888752 123457899999999999999 67999999
Q ss_pred cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
|||.+|+.||+++|+|+|++|..+||..|++++++.|+|+.+..++++.++|.++|+++++|+++++++.+.++.+.+
T Consensus 306 ~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~-- 383 (430)
T 2iyf_A 306 HAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQ-- 383 (430)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--
T ss_pred CCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh--
Confidence 999999999999999999999999999999999999999999888889999999999999999999999999998876
Q ss_pred CChHHHHHHHHHHHHHc
Q psy16503 169 MPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~~ 185 (244)
..+.+.++++++.+++.
T Consensus 384 ~~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 384 EGGTRRAADLIEAELPA 400 (430)
T ss_dssp HCHHHHHHHHHHTTSCC
T ss_pred cCcHHHHHHHHHHHhhc
Confidence 35788899888877654
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-22 Score=176.67 Aligned_cols=165 Identities=26% Similarity=0.384 Sum_probs=146.8
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC----CCCCCCCEEEeccCChhhhhCCCCeeEEEe
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILDHPNVKVFIS 88 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~----~~~~~~nv~~~~~~pq~~lL~h~~~~l~It 88 (244)
.++++|++++|+.. ....+.+..+++++.+.+.+++|..++.. +...++|+.+.+|+|+.++| +.+|+||+
T Consensus 240 ~~~~~vlv~~G~~~---~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~ 314 (412)
T 3otg_A 240 TARPLVYLTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALL--PHVDLVVH 314 (412)
T ss_dssp TTSCEEEEECTTTT---CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHG--GGCSEEEE
T ss_pred CCCCEEEEEcCCCC---cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHH--hcCcEEEE
Confidence 44689999999995 24678889999999888889999888633 33567899999999999999 67999999
Q ss_pred cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCC
Q psy16503 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRP 168 (244)
Q Consensus 89 hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~ 168 (244)
|||.+|+.||+++|+|+|++|..+||..|+..+++.|.|..+..++++.++|.++|.++++|+++++++.+.++.+.+.
T Consensus 315 ~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~~- 393 (412)
T 3otg_A 315 HGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAM- 393 (412)
T ss_dssp SCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHS-
T ss_pred CCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcC-
Confidence 9999999999999999999999999999999999999999999888899999999999999999999999999999874
Q ss_pred CChHHHHHHHHHHHHH
Q psy16503 169 MPPLDTAIYWIEHVIR 184 (244)
Q Consensus 169 ~~~~~~a~~~ie~~~~ 184 (244)
.+.+++++.++.+++
T Consensus 394 -~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 394 -PGPDEVVRLLPGFAS 408 (412)
T ss_dssp -CCHHHHHTTHHHHHC
T ss_pred -CCHHHHHHHHHHHhc
Confidence 468888888887764
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=163.92 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=132.4
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC----CeEEEEecCCC-------CCCCCCCEEEeccCChh-hhhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QRVIWKWEGEN-------MSGKIDKILLKSWAPQR-DILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~----~~viw~~~~~~-------~~~~~~nv~~~~~~pq~-~lL~h~~ 82 (244)
++.|++..||... ....+.+.+++..++ ..++|.++... ....+.++.+.+|++++ ++| +.
T Consensus 180 ~~~ilv~gGs~g~-----~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~ 252 (365)
T 3s2u_A 180 RVNLLVLGGSLGA-----EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AW 252 (365)
T ss_dssp CCEEEECCTTTTC-----SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HH
T ss_pred CcEEEEECCcCCc-----cccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--cc
Confidence 5688888888732 345556677776654 36888887532 12356789999999876 567 78
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCC----cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
+|++|||+|.+|+.|++++|+|+|.+|+. ++|..||+.+++.|+|+++..++++.+.|.++|.++++|++.+++|.
T Consensus 253 aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~ 332 (365)
T 3s2u_A 253 ADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMA 332 (365)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHH
T ss_pred ceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999999999999873 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++.+.. .++.+++++.++.+.|
T Consensus 333 ~~a~~~~~--~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 333 DQARSLAK--PEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHTCC--TTHHHHHHHHHHHHC-
T ss_pred HHHHhcCC--ccHHHHHHHHHHHHHc
Confidence 98888865 4678888888888764
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=135.67 Aligned_cols=123 Identities=13% Similarity=0.116 Sum_probs=95.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHH-----HHHHhcCC-CeEEEEecCCCC---CC-------------CC--------
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAF-----LRAFEQIP-QRVIWKWEGENM---SG-------------KI-------- 63 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i-----~~al~~~~-~~viw~~~~~~~---~~-------------~~-------- 63 (244)
++++|+|+.||... + .+.+..+ ++++...+ .++++++|.... .. .|
T Consensus 27 ~~~~VlVtgGS~~~---~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATVP---F-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCCS---C-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCchH---H-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 46899999999831 2 4555544 38887777 689999987432 10 01
Q ss_pred -----------CCEEEeccCChh-hhhCCC-CeeEEEecCChhhHHHHHHhCCcEEecCCC----cchhhHHHHHHHcCc
Q psy16503 64 -----------DKILLKSWAPQR-DILDHP-NVKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGF 126 (244)
Q Consensus 64 -----------~nv~~~~~~pq~-~lL~h~-~~~l~IthgG~~s~~Eal~~gvP~i~vP~~----~dQ~~na~~~~~~G~ 126 (244)
.++...+|+++. +++ + .++++|||||+||+.|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 256778888877 667 8 999999999999999999999999999984 479999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHH
Q psy16503 127 GVTLPYDQITEETVLVALRTV 147 (244)
Q Consensus 127 g~~l~~~~~~~~~l~~ai~~l 147 (244)
|+.+ +.++|.++|+++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9887 345667777776
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-13 Score=120.49 Aligned_cols=160 Identities=14% Similarity=0.072 Sum_probs=126.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC--CeEEEEecCCCCC-------CC-CCCEEEeccCCh-hhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMS-------GK-IDKILLKSWAPQ-RDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~--~~viw~~~~~~~~-------~~-~~nv~~~~~~pq-~~lL~h~~~ 83 (244)
++++++..|+.. +......+++++..++ .++++.+|+.... .. .+|+.+.+|+++ .+++ ..+
T Consensus 183 ~~~il~~~g~~~-----~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 255 (364)
T 1f0k_A 183 PVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 255 (364)
T ss_dssp SEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred CcEEEEEcCchH-----hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhC
Confidence 456777777773 3455566667766553 4666767653211 11 258999999854 5677 789
Q ss_pred eEEEecCChhhHHHHHHhCCcEEecCCC---cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 84 KVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 84 ~l~IthgG~~s~~Eal~~gvP~i~vP~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
|++|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+.|.|..++.++++.+++.++|.++ |++.++++.+.
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~ 333 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAER 333 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHH
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHH
Confidence 9999999999999999999999999987 799999999999999999988777899999999999 88889999888
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
++.+.+ ....+.++..++.+.+.
T Consensus 334 ~~~~~~--~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 334 ARAASI--PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHTCC--TTHHHHHHHHHHHHHTT
T ss_pred HHHhhc--cCHHHHHHHHHHHHHHH
Confidence 887765 45678888888877765
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-12 Score=109.97 Aligned_cols=109 Identities=14% Similarity=0.090 Sum_probs=86.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC--------CCCCCCEEEeccCChhh-hhCCCCeeE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--------SGKIDKILLKSWAPQRD-ILDHPNVKV 85 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~--------~~~~~nv~~~~~~pq~~-lL~h~~~~l 85 (244)
.+.|+|++|+.. +......+++++.+.+ ++.+.++.... ....+|+.+.+|++++. ++ ..+|+
T Consensus 157 ~~~ILv~~GG~d-----~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m--~~aDl 228 (282)
T 3hbm_A 157 KYDFFICMGGTD-----IKNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLM--NESNK 228 (282)
T ss_dssp CEEEEEECCSCC-----TTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHH--HTEEE
T ss_pred CCeEEEEECCCc-----hhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHH--HHCCE
Confidence 468999999873 2345667888887654 45555554211 01234899999998774 66 89999
Q ss_pred EEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCC
Q psy16503 86 FISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 132 (244)
Q Consensus 86 ~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~ 132 (244)
+||+|| +|++|+++.|+|+|++|...+|..||+.+++.|+|+.+..
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcch
Confidence 999999 7999999999999999999999999999999999999863
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.6e-08 Score=79.23 Aligned_cols=134 Identities=18% Similarity=0.184 Sum_probs=94.1
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCCCCC-----------CCCCCEEEeccCCh---hhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGENMS-----------GKIDKILLKSWAPQ---RDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~~~~-----------~~~~nv~~~~~~pq---~~lL~ 79 (244)
++.+++..|+... .+-...+++++..++. ++++.-++.... +.++|+.+.+|+|+ .+++
T Consensus 22 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~- 95 (177)
T 2f9f_A 22 YGDFWLSVNRIYP-----EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY- 95 (177)
T ss_dssp CCSCEEEECCSSG-----GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH-
T ss_pred CCCEEEEEecccc-----ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH-
Confidence 4556777888743 3446677888888754 665543332211 23569999999997 3566
Q ss_pred CCCeeEEEe---c-CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH-H
Q psy16503 80 HPNVKVFIS---H-GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY-K 154 (244)
Q Consensus 80 h~~~~l~It---h-gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y-~ 154 (244)
..++++|. + |...++.||+++|+|+|+.+. ..+...+.+.+.|..+ .. +.+++.++|.++++|+.+ +
T Consensus 96 -~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~~--d~~~l~~~i~~l~~~~~~~~ 167 (177)
T 2f9f_A 96 -SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-NA--DVNEIIDAMKKVSKNPDKFK 167 (177)
T ss_dssp -HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-CS--CHHHHHHHHHHHHHCTTTTH
T ss_pred -HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-CC--CHHHHHHHHHHHHhCHHHHH
Confidence 67888886 2 334699999999999999864 3445555556678887 33 689999999999988775 7
Q ss_pred HHHHHHHH
Q psy16503 155 KRAEKVAR 162 (244)
Q Consensus 155 ~~a~~~s~ 162 (244)
+++++.++
T Consensus 168 ~~~~~~a~ 175 (177)
T 2f9f_A 168 KDCFRRAK 175 (177)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77766654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.2e-08 Score=88.79 Aligned_cols=154 Identities=13% Similarity=0.094 Sum_probs=102.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC-----C---CCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~lL 78 (244)
+++|+++.|...... -...+++++.. .+ ..+++..++.. + ....+++.+.++++. .+++
T Consensus 198 ~~~vl~~~gr~~~~k-----~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP-----LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGGGG-----GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccchH-----HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 456777777542211 23445555443 33 35665545321 0 012358999966654 4677
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..+|+||+.+| |.+.||+++|+|+|+.|-.+++.. +.+.|.|+.+. .+.++|.++|.++++|++.++++.
T Consensus 273 --~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~~~~~~~~ 342 (376)
T 1v4v_A 273 --RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENPEELSRMR 342 (376)
T ss_dssp --HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred --HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhChHhhhhhc
Confidence 78999999884 446699999999999876666555 34668888875 278999999999999988777777
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
+.++.+.+ ..+.++.+..++.++..
T Consensus 343 ~~~~~~~~--~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 343 KAKNPYGD--GKAGLMVARGVAWRLGL 367 (376)
T ss_dssp HSCCSSCC--SCHHHHHHHHHHHHTTS
T ss_pred ccCCCCCC--ChHHHHHHHHHHHHhcc
Confidence 64444422 46678888887776654
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=7.3e-09 Score=90.29 Aligned_cols=160 Identities=10% Similarity=0.087 Sum_probs=104.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC-----C---CCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~lL 78 (244)
+++++++.|.... .. +-...+++++.. .+ .++++..+... + ....++|.+.++++. .+++
T Consensus 205 ~~~vl~~~gr~~~---~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 205 KKMILVTGHRRES---FG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp SEEEEEECCCBSS---CC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCCccc---cc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4578888887632 11 234445555543 33 35666444221 1 012368999777664 3567
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..+|+||+..|. .+.||+++|+|+|+.|..++.. .+.+.|.|+.++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT---DKQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp --HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS---SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC---CHHHHHHHHHHHHhChHHHhhhh
Confidence 679999998764 4889999999999998754432 3456689998865 78999999999999988777776
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHcCCCCC
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIRHGGGAH 190 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~~~~~~~ 190 (244)
+.++.+.+ ....++.+..++.+.+.-|..|
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 351 RAHNPYGD--GQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp SSCCTTCC--SCHHHHHHHHHHHTCCCC----
T ss_pred hccCCCcC--CCHHHHHHHHHHHHHHhhcccc
Confidence 65555532 4567777777776665544443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.68 E-value=5.8e-08 Score=86.30 Aligned_cols=156 Identities=13% Similarity=0.137 Sum_probs=105.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CCC-eEEEEecCCC-----C---CCCCCCEEEeccCCh---hhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IPQ-RVIWKWEGEN-----M---SGKIDKILLKSWAPQ---RDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~~-~viw~~~~~~-----~---~~~~~nv~~~~~~pq---~~l 77 (244)
++++++++.|.... .. +.+..+++++.. .+. ++++..+.+. + ....+++.+.+++++ ..+
T Consensus 223 ~~~~vlv~~~r~~~---~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l 298 (403)
T 3ot5_A 223 DNRLILMTAHRREN---LG-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNF 298 (403)
T ss_dssp TCEEEEECCCCHHH---HT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCcccc---cC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHH
Confidence 34677776654211 11 113445555443 343 6777654321 1 123468999999863 356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
+ ..++++|+..|..+ .||+++|+|+|++|-.++++. +.+.|.|+.+.. +.++|.+++.++++|+..++++
T Consensus 299 ~--~~ad~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~~m 368 (403)
T 3ot5_A 299 L--RKSYLVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHDKM 368 (403)
T ss_dssp H--HHEEEEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHHHH
T ss_pred H--HhcCEEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHHHH
Confidence 6 78999999875433 799999999999965555543 357788888753 6899999999999999888888
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 158 EKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 158 ~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
.+.+..+.+ ..+.++.++.++..+..
T Consensus 369 ~~~~~~~g~--~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 369 AQAANPYGD--GFAANRILAAIKSHFEE 394 (403)
T ss_dssp HHSCCTTCC--SCHHHHHHHHHHHHHTC
T ss_pred HhhcCcccC--CcHHHHHHHHHHHHhCC
Confidence 776555544 56788888888877654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=5.6e-07 Score=77.69 Aligned_cols=155 Identities=14% Similarity=0.216 Sum_probs=101.5
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC----e-EEEEecCCCCC---------CCCCCEEEeccCCh-hhhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ----R-VIWKWEGENMS---------GKIDKILLKSWAPQ-RDIL 78 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~----~-viw~~~~~~~~---------~~~~nv~~~~~~pq-~~lL 78 (244)
+++.+++..|+... .+-...+++++..+.. . -++.+|+.... +.++++.+.++.++ .+++
T Consensus 194 ~~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp TTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred CCCeEEEEeccchh-----hcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 34677888888743 2335556777776632 1 23345542211 23578999998654 3566
Q ss_pred CCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHH
Q psy16503 79 DHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 154 (244)
Q Consensus 79 ~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~ 154 (244)
..++++|. -|..+++.||+++|+|+|+.+.. .+...+.+.+.|..++. .-+.+++.++|.++++|++.+
T Consensus 269 --~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~~~~ 341 (374)
T 2iw1_A 269 --AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSPLR 341 (374)
T ss_dssp --HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHHHH
T ss_pred --HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEeCC-CCCHHHHHHHHHHHHcChHHH
Confidence 67888886 46678999999999999998763 34566777789998862 226899999999999998776
Q ss_pred HHHHHHHHHHhCC--CCChHHHHHHHHH
Q psy16503 155 KRAEKVARLFQDR--PMPPLDTAIYWIE 180 (244)
Q Consensus 155 ~~a~~~s~~~~~~--~~~~~~~a~~~ie 180 (244)
+++.+.++....+ .....+.+..+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 342 MAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6665555444321 1344444444443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=84.18 Aligned_cols=150 Identities=12% Similarity=0.115 Sum_probs=98.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----C-CeEEEEecCCC--------CCCCCCCEEEeccCCh---hhhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------MSGKIDKILLKSWAPQ---RDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq---~~lL 78 (244)
+++++++.+-... .... +..+++++..+ + .++++..+.+. .....+++.+.++++. ..++
T Consensus 230 ~~~vlv~~hR~~~---~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 230 KKLILVTGHRRES---FGGG-FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp SEEEEEECSCBCC---CTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEECCccc---chhH-HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 4677776532111 1122 45666666543 3 36776554221 1123468999888753 3566
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..++++|+..| |...||+++|+|+|+.+-.+++. .+.+.|.++.+.. +.++|.+++.++++|+..++++.
T Consensus 306 --~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~~~~~m~ 375 (396)
T 3dzc_A 306 --DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDPQAYQAMS 375 (396)
T ss_dssp --HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCHHHHHHHh
Confidence 67999999887 55579999999999985444443 2456788877653 58999999999999998888887
Q ss_pred HHHHHHhCCCCChHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.+..+.+ .++.+++++.++
T Consensus 376 ~~~~~~~~--~~aa~ri~~~l~ 395 (396)
T 3dzc_A 376 QAHNPYGD--GKACQRIADILA 395 (396)
T ss_dssp TSCCTTCC--SCHHHHHHHHHH
T ss_pred hccCCCcC--ChHHHHHHHHHh
Confidence 76555544 456666665543
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.61 E-value=1e-07 Score=84.24 Aligned_cols=156 Identities=15% Similarity=0.109 Sum_probs=103.6
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCeEEEEecCC------CC---CCCCCCEEEeccCCh---hhh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGE------NM---SGKIDKILLKSWAPQ---RDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~~viw~~~~~------~~---~~~~~nv~~~~~~pq---~~l 77 (244)
++++++++.|.... ..+.+.++.+++++.++ +..+++..+.. +. ....+|+++.+.++. ..+
T Consensus 202 ~~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l 279 (385)
T 4hwg_A 202 PKQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKL 279 (385)
T ss_dssp TTSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHH
T ss_pred cCCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHH
Confidence 35788888876521 11234566777776654 34677755431 12 112468988776654 356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHH
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 157 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a 157 (244)
+ ..++++||..|. .+.||.+.|+|+|.++-..+.+. ..+.|.++.+.. +.++|.+++.++++|+..++.+
T Consensus 280 ~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~~~~~~m 349 (385)
T 4hwg_A 280 Q--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSGF---KAERVLQAVKTITEEHDNNKRT 349 (385)
T ss_dssp H--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECCS---SHHHHHHHHHHHHTTCBTTBCC
T ss_pred H--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcCC---CHHHHHHHHHHHHhChHHHHHh
Confidence 7 679999998775 46999999999999976543222 356788887753 6899999999999987765554
Q ss_pred HHHHHHH-hCCCCChHHHHHHHHHHHH
Q psy16503 158 EKVARLF-QDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 158 ~~~s~~~-~~~~~~~~~~a~~~ie~~~ 183 (244)
.+.+..+ .+ .++.+++++.++..+
T Consensus 350 ~~~~~~~~g~--g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 350 QGLVPDYNEA--GLVSKKILRIVLSYV 374 (385)
T ss_dssp SCCCHHHHTC--CCHHHHHHHHHHHHH
T ss_pred hccCCCCCCC--ChHHHHHHHHHHHHh
Confidence 4434445 55 577888887776554
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6.3e-07 Score=77.83 Aligned_cols=153 Identities=13% Similarity=0.114 Sum_probs=96.4
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC--------CCCCCCCEEEeccCChhh---h
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN--------MSGKIDKILLKSWAPQRD---I 77 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~~---l 77 (244)
+++.+++..|+.... +-...+++++.. .+ .++++ +|+.. ..+..+++.+.+++|+.+ +
T Consensus 196 ~~~~~i~~~G~~~~~-----Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (394)
T 3okp_A 196 DTTPVIACNSRLVPR-----KGQDSLIKAMPQVIAARPDAQLLI-VGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINT 269 (394)
T ss_dssp TTCCEEEEESCSCGG-----GCHHHHHHHHHHHHHHSTTCEEEE-ECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHH
T ss_pred cCceEEEEEeccccc-----cCHHHHHHHHHHHHhhCCCeEEEE-EcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHH
Confidence 345778888887432 223334444433 23 35554 44321 122357999999998664 5
Q ss_pred hCCCCeeEEEe-----------cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHH
Q psy16503 78 LDHPNVKVFIS-----------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 146 (244)
Q Consensus 78 L~h~~~~l~It-----------hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 146 (244)
+ ..++++|. -|..+++.||+++|+|+|+.+..+- ...+ +.|.|..++.. +.+++.++|.+
T Consensus 270 ~--~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~----~e~i-~~~~g~~~~~~--d~~~l~~~i~~ 340 (394)
T 3okp_A 270 L--AAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA----PETV-TPATGLVVEGS--DVDKLSELLIE 340 (394)
T ss_dssp H--HHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG----GGGC-CTTTEEECCTT--CHHHHHHHHHH
T ss_pred H--HhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh----HHHH-hcCCceEeCCC--CHHHHHHHHHH
Confidence 5 67888887 5667899999999999999876331 1222 23478888654 58999999999
Q ss_pred HhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 147 VLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 147 ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
+++|++.++++.+.+.....+..+....+..+.+.
T Consensus 341 l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 375 (394)
T 3okp_A 341 LLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNI 375 (394)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99998877766665554432223444444444443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=98.52 E-value=5.9e-07 Score=77.77 Aligned_cols=152 Identities=14% Similarity=0.150 Sum_probs=98.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCC--------CCCCCCCEEEeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN--------MSGKIDKILLKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~---~lL 78 (244)
+++++++.|.... . .+-...+++++.. .+ .++++..+.+. +....+++.+.++++.. +++
T Consensus 205 ~~~vl~~~gr~~~---~-~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 205 NRLVLMTAHRREN---L-GEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp SEEEEEECCCGGG---T-THHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCeEEEEeccccc---c-hhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4567778876532 1 1334556666543 33 35554322111 00123689998877654 566
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..++++|+..| +.+.||+++|+|+|+.+-.+.. ..+.+.|.|..++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~---d~~~la~~i~~ll~~~~~~~~~~ 350 (375)
T 3beo_A 281 --ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT---DEETIFSLADELLSDKEAHDKMS 350 (375)
T ss_dssp --HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS---CHHHHHHHHHHHHHCHHHHHHHC
T ss_pred --HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC---CHHHHHHHHHHHHhChHhHhhhh
Confidence 67999999864 4589999999999998543432 23456788988863 78999999999999988777766
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHV 182 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~ 182 (244)
+.++.+.+ ....++.+..++.+
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 351 KASNPYGD--GRASERIVEAILKH 372 (375)
T ss_dssp CCCCTTCC--SCHHHHHHHHHHHH
T ss_pred hcCCCCCC--CcHHHHHHHHHHHH
Confidence 55544432 34566666655544
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=6.8e-06 Score=71.59 Aligned_cols=110 Identities=13% Similarity=0.103 Sum_probs=80.5
Q ss_pred CCCEEEeccCChh---hhhCCCCeeEEEecC----C-hhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 63 IDKILLKSWAPQR---DILDHPNVKVFISHG----G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 63 ~~nv~~~~~~pq~---~lL~h~~~~l~Ithg----G-~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
++++.+.+++|+. +++ ..++++|.-. | .+++.||+++|+|+|+.+. ......+.+.+.|..++.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~- 334 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAM--RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD- 334 (406)
T ss_dssp GGGEEECCSCCHHHHHHHH--HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT-
T ss_pred cCcEEEEecCCHHHHHHHH--HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC-
Confidence 5789999999875 566 5688887542 3 4689999999999999866 4455666666788888654
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
+.+++.++|.++++|+..++++.+.++.... ..+....+..+.+.
T Consensus 335 -d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~ 379 (406)
T 2gek_A 335 -DADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRV 379 (406)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 5899999999999998877777766666554 35544444444443
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.3e-05 Score=70.36 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=89.9
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CeEEEEecCCC--------C------CCCCCCEEEeccCC---hh
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN--------M------SGKIDKILLKSWAP---QR 75 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-~~viw~~~~~~--------~------~~~~~nv~~~~~~p---q~ 75 (244)
++..+++..|.....+. ...+++.+.....+.+ .++++.-++.. + .+..++|.+.+|++ +.
T Consensus 229 ~~~~~i~~vGrl~~~Kg-~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 229 PEKPIITQVSRFDPWKG-IFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp TTSCEEEEECCCCTTSC-HHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred CCCcEEEEEeccccccC-HHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHH
Confidence 34566777787744222 2333333333333333 35555433321 0 12457899998765 22
Q ss_pred ---hhhCCCCeeEEEecC----ChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHh
Q psy16503 76 ---DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148 (244)
Q Consensus 76 ---~lL~h~~~~l~Ithg----G~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll 148 (244)
+++ ..+|++|.-. ..+++.||+++|+|+|+.+. ..+...+.+.+.|..++ +.+++.++|.+++
T Consensus 308 ~~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i~~ll 377 (416)
T 2x6q_A 308 EVNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVVLYLL 377 (416)
T ss_dssp HHHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHHHHHH
T ss_pred HHHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHHHHHH
Confidence 456 6788888643 46789999999999999875 34555555567888886 6899999999999
Q ss_pred CChhHHHHHHHHHHHH
Q psy16503 149 GNPSYKKRAEKVARLF 164 (244)
Q Consensus 149 ~~~~y~~~a~~~s~~~ 164 (244)
+|+..++++.+.+...
T Consensus 378 ~~~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 378 KHPEVSKEMGAKAKER 393 (416)
T ss_dssp HCHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHH
Confidence 9988776666655443
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.5e-05 Score=73.04 Aligned_cols=156 Identities=11% Similarity=0.181 Sum_probs=101.7
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEec-CCC----------CCCCC-CCEEEeccCChh---hhhCC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWE-GEN----------MSGKI-DKILLKSWAPQR---DILDH 80 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~-~~~----------~~~~~-~nv~~~~~~pq~---~lL~h 80 (244)
.+|+ ..|.... .....+++.+....++.|.-.++.+| +.. ..+.. ++|.+.+++|+. +++
T Consensus 377 ~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~-- 451 (568)
T 2vsy_A 377 GVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARY-- 451 (568)
T ss_dssp SCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHG--
T ss_pred CEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHH--
Confidence 4444 5566644 34456666666655666654455566 321 01233 789999999854 446
Q ss_pred CCeeEEEe---cCChhhHHHHHHhCCcEEecCCCcc-hhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 81 PNVKVFIS---HGGFLGTTEALYSGVPIIGIPMFGD-QKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 81 ~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~~d-Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..+|+|+. .|+.+++.||+++|+|+|+.|-..- -..-+..+...|+...+.. +.+++.+++.++++|+..+++
T Consensus 452 ~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~~~~~ 528 (568)
T 2vsy_A 452 RHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPAALTA 528 (568)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHHH
T ss_pred hcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHHHHHH
Confidence 67888873 3777899999999999999865311 1223455666688776653 789999999999999988888
Q ss_pred HHHHHHHHh--CCCCChHHHHHHHHH
Q psy16503 157 AEKVARLFQ--DRPMPPLDTAIYWIE 180 (244)
Q Consensus 157 a~~~s~~~~--~~~~~~~~~a~~~ie 180 (244)
+.+.+.... .+..+. +..+..++
T Consensus 529 ~~~~~~~~~~~~~~f~~-~~~~~~~~ 553 (568)
T 2vsy_A 529 LHARVDVLRRASGVFHM-DGFADDFG 553 (568)
T ss_dssp HHHHHHHHHHHSSTTCH-HHHHHHHH
T ss_pred HHHHHHHhhhcCCCCCH-HHHHHHHH
Confidence 777665554 333443 44333333
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.3e-05 Score=70.83 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=79.5
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
..++|.+.+++|+. +++ ..+|++|.- |..+++.||+++|+|+|+.+.. .....+.+.+.|..++..
T Consensus 304 l~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~- 376 (438)
T 3c48_A 304 VEKRIRFLDPRPPSELVAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGH- 376 (438)
T ss_dssp CTTTEEEECCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEESSC-
T ss_pred CCCcEEEcCCCChHHHHHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEECCCC-
Confidence 45789999999864 466 678888864 3357899999999999998653 344445555678888654
Q ss_pred CCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCC---hHHHHHHHHHHHHHcCC
Q psy16503 135 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMP---PLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~---~~~~a~~~ie~~~~~~~ 187 (244)
+.+++.++|.++++|+..++++.+.+.....+ .+ -.+......+.++....
T Consensus 377 -d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 377 -SPHAWADALATLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred -CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 58999999999999987666655544433322 22 22333444555555543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=4.8e-06 Score=72.66 Aligned_cols=153 Identities=14% Similarity=0.136 Sum_probs=93.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCeEEEEecCCC----------CCCCCCCEEEeccCCh-hhhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGEN----------MSGKIDKILLKSWAPQ-RDILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~----~~~viw~~~~~~----------~~~~~~nv~~~~~~pq-~~lL~ 79 (244)
++.+++..|.... .+-...+++++..+ +.++++ +|+.. ..+.+++|.+.++.++ .+++
T Consensus 210 ~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~- 282 (394)
T 2jjm_A 210 SEKILIHISNFRK-----VKRVQDVVQAFAKIVTEVDAKLLL-VGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELL- 282 (394)
T ss_dssp --CEEEEECCCCG-----GGTHHHHHHHHHHHHHSSCCEEEE-ECCCTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHH-
T ss_pred CCeEEEEeecccc-----ccCHHHHHHHHHHHHhhCCCEEEE-ECCchHHHHHHHHHHHcCCCCeEEEeCchhhHHHHH-
Confidence 3566777788743 22233344444332 344444 44321 1123568888887544 3567
Q ss_pred CCCeeEEE----ecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 80 HPNVKVFI----SHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 80 h~~~~l~I----thgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
..+|++| .-|..+++.||+++|+|+|+.+..+ ....+.+.+.|..++.. +.+++.++|.++++|++.++
T Consensus 283 -~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 283 -AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEVG--DTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp -HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred -HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 6788888 4566789999999999999987532 12223344578888654 58999999999999988776
Q ss_pred HHHHHHHHHhCCCCChHHHHHHHHHH
Q psy16503 156 RAEKVARLFQDRPMPPLDTAIYWIEH 181 (244)
Q Consensus 156 ~a~~~s~~~~~~~~~~~~~a~~~ie~ 181 (244)
++.+.+.....+..+....+..+.+.
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~ 381 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETI 381 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 66665554432224444444444433
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.2e-05 Score=74.69 Aligned_cols=164 Identities=12% Similarity=0.216 Sum_probs=113.6
Q ss_pred CCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------------CCCCCCCEEEeccCChhhhhC-C
Q psy16503 14 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------------MSGKIDKILLKSWAPQRDILD-H 80 (244)
Q Consensus 14 ~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------------~~~~~~nv~~~~~~pq~~lL~-h 80 (244)
++.++|.+|....+ ++++.+....+.|++.|..++|...... ..-.++.+.+.+..|..+.|. +
T Consensus 521 ~~~v~f~~fN~~~K---i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 521 EDAIVYCNFNQLYK---IDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TTSEEEECCSCGGG---CCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCEEEEeCCcccc---CCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 45688888877755 8899999999999999999998876421 111356799999998776553 4
Q ss_pred CCeeEEEe---cCChhhHHHHHHhCCcEEecCC-CcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 81 PNVKVFIS---HGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 81 ~~~~l~It---hgG~~s~~Eal~~gvP~i~vP~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
..+|+++. .+|.+|.+||+++|||+|.+|- ..-...-+..+...|+...+-. +.++-.+.--++-+|+.++..
T Consensus 598 ~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~---~~~~Y~~~a~~la~d~~~l~~ 674 (723)
T 4gyw_A 598 QLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK---NRQEYEDIAVKLGTDLEYLKK 674 (723)
T ss_dssp GGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC---CHHHHHHHHHHHhcCHHHHHH
Confidence 77999987 7889999999999999999984 2234445667777788877654 455544444466668776666
Q ss_pred HHH-HHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 157 AEK-VARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 157 a~~-~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
.++ +.+.....|.--.+..+..+|..+
T Consensus 675 lr~~l~~~~~~s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 675 VRGKVWKQRISSPLFNTKQYTMELERLY 702 (723)
T ss_dssp HHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCHHHHHHHHHHHH
Confidence 553 333333334333455555555544
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=2.2e-05 Score=70.82 Aligned_cols=137 Identities=13% Similarity=0.121 Sum_probs=92.6
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC----Ce-EEEEecCC--C------C-----------------CCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QR-VIWKWEGE--N------M-----------------SGKID 64 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~----~~-viw~~~~~--~------~-----------------~~~~~ 64 (244)
++.+++..|.... .+-...+++++..+. .. .++.+|+. . + .+..+
T Consensus 261 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 261 ELPAIIASSRLDQ-----KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp TSCEEEECSCCCG-----GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred CCcEEEEeecCcc-----ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 4567788888743 344566777776663 12 34455541 1 0 12457
Q ss_pred CEEEeccCChh---hhhCCCCe----eEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC
Q psy16503 65 KILLKSWAPQR---DILDHPNV----KVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 133 (244)
Q Consensus 65 nv~~~~~~pq~---~lL~h~~~----~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~ 133 (244)
+|.+.+++|+. +++ ..+ |++|.- |-..++.||+++|+|+|+.... .....+.+...|..++..
T Consensus 336 ~V~~~G~v~~~~~~~~~--~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~ 409 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCY--AYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE 409 (499)
T ss_dssp TEEEEECCSHHHHHHHH--HHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT
T ss_pred eEEECCCCCHHHHHHHH--HhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC
Confidence 89999999765 456 567 888852 4457899999999999998642 344445555678888654
Q ss_pred CCCHHHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 134 QITEETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 134 ~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
+.+++.++|.++++|+..++++.+.+...
T Consensus 410 --d~~~la~~i~~ll~~~~~~~~~~~~a~~~ 438 (499)
T 2r60_A 410 --DPEDIARGLLKAFESEETWSAYQEKGKQR 438 (499)
T ss_dssp --CHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 58999999999999987766665544433
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.9e-05 Score=61.05 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=68.6
Q ss_pred CEEE-eccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCC
Q psy16503 65 KILL-KSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136 (244)
Q Consensus 65 nv~~-~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~ 136 (244)
++.+ .+++|+. +++ ..+++++.- |...++.||+++|+|+|+... ......+ +.+.|..++.. +
T Consensus 96 ~v~~~~g~~~~~~~~~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~~--~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKAG--D 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECTT--C
T ss_pred CEEEEeccCCHHHHHHHH--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecCC--C
Confidence 8999 9999844 466 678888863 335789999999999999854 2344445 55678888654 5
Q ss_pred HHHHHHHHHHHhC-ChhHHHHHHHHHHHH
Q psy16503 137 EETVLVALRTVLG-NPSYKKRAEKVARLF 164 (244)
Q Consensus 137 ~~~l~~ai~~ll~-~~~y~~~a~~~s~~~ 164 (244)
.+++.++|.++++ |+..++++.+.+...
T Consensus 167 ~~~l~~~i~~l~~~~~~~~~~~~~~a~~~ 195 (200)
T 2bfw_A 167 PGELANAILKALELSRSDLSKFRENCKKR 195 (200)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 8999999999999 988777666655443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.5e-05 Score=69.88 Aligned_cols=108 Identities=11% Similarity=-0.024 Sum_probs=75.9
Q ss_pred CCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 63 IDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 63 ~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
++++.+.+|+|+.+ ++ ..+|++|.- |-.+++.||+++|+|+|+.+.. ... .+.+.|.|..++..
T Consensus 310 ~~~~~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~-e~~~~~~g~~~~~~-- 380 (439)
T 3fro_A 310 GNVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLR-DIITNETGILVKAG-- 380 (439)
T ss_dssp TTEEEECSCCCHHHHHHHH--TTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHH-HHCCTTTCEEECTT--
T ss_pred CCEEEEcCCCCHHHHHHHH--HHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----Ccc-eeEEcCceEEeCCC--
Confidence 45667788898764 56 678888853 4457999999999999998653 222 33335688888754
Q ss_pred CHHHHHHHHHHHhC-ChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 136 TEETVLVALRTVLG-NPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 136 ~~~~l~~ai~~ll~-~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.+++.++|.++++ |++.++++.+.+.....+ .+....+..+.+
T Consensus 381 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~ 425 (439)
T 3fro_A 381 DPGELANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSAERYVK 425 (439)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT-SCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh-CcHHHHHHHHHH
Confidence 58999999999998 877777776666665532 554444444444
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=3.2e-05 Score=67.77 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=93.8
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc----CC-CeEEEEecCCCC---------------CCCCCC-------EE
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGENM---------------SGKIDK-------IL 67 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~----~~-~~viw~~~~~~~---------------~~~~~n-------v~ 67 (244)
++.+++..|.... .+-...+++++.. .+ .++++.-++... .+..++ +.
T Consensus 183 ~~~~il~vGr~~~-----~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTA-----RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSG-----GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCch-----hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceee
Confidence 4678888888743 2223444444443 34 355554433211 113443 77
Q ss_pred EeccCChh---hhhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCc--------------
Q psy16503 68 LKSWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGF-------------- 126 (244)
Q Consensus 68 ~~~~~pq~---~lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~-------------- 126 (244)
+.+|+|+. +++ ..+|+++. -|...++.||+++|+|+|+.... .....+.+...
T Consensus 258 ~~g~~~~~~~~~~~--~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 258 NRTVLTDERVDMMY--NACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDR 331 (413)
T ss_dssp ECSCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTT
T ss_pred ccCcCCHHHHHHHH--HhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccc
Confidence 78999855 455 56788874 24456899999999999997542 23333332222
Q ss_pred -ee--ecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 127 -GV--TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 127 -g~--~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
|. .+... +.+++.++| ++++|++.++++.+.+.....+..+....+..+.+
T Consensus 332 ~G~~gl~~~~--d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 332 DGIGGIEGII--DVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp CSSCCEEEEC--CHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred cCcceeeCCC--CHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44 55433 689999999 99999988888887777765444555444444443
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.3e-05 Score=59.81 Aligned_cols=133 Identities=10% Similarity=0.103 Sum_probs=82.0
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC---C-eEEEEecCCCC--------CCCCCCEEEeccCChh---hhhCC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP---Q-RVIWKWEGENM--------SGKIDKILLKSWAPQR---DILDH 80 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~---~-~viw~~~~~~~--------~~~~~nv~~~~~~pq~---~lL~h 80 (244)
+++++..|+... .+-...+++++..+. . ++++ +|.... ...+.++.+ +|+|+. +++
T Consensus 2 ~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~-- 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN-----EKNQSVLIKAVALSKYKQDIVLLL-KGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEIL-- 72 (166)
T ss_dssp CEEEEEESCCST-----TTTHHHHHHHHHTCTTGGGEEEEE-ECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHH--
T ss_pred ceEEEEEeccch-----hcCHHHHHHHHHHhccCCCeEEEE-EeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHH--
Confidence 578888888843 233556677776663 2 3333 443211 112337888 999865 456
Q ss_pred CCeeEEEe----cCChhhHHHHHHhCC-cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHH
Q psy16503 81 PNVKVFIS----HGGFLGTTEALYSGV-PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 155 (244)
Q Consensus 81 ~~~~l~It----hgG~~s~~Eal~~gv-P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~ 155 (244)
..++++|. -|...++.||+++|+ |+|+.+-.+.-. ..+.+.+. .+... +.+++.++|.++++|+..++
T Consensus 73 ~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~~~~--~~~~~--~~~~l~~~i~~l~~~~~~~~ 145 (166)
T 3qhp_A 73 KTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALDERS--LFEPN--NAKDLSAKIDWWLENKLERE 145 (166)
T ss_dssp TTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSSGGG--EECTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred HhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccCCce--EEcCC--CHHHHHHHHHHHHhCHHHHH
Confidence 67888886 244579999999996 999943211110 11111122 33332 68999999999999987766
Q ss_pred HHHHHHHHH
Q psy16503 156 RAEKVARLF 164 (244)
Q Consensus 156 ~a~~~s~~~ 164 (244)
++.+.+...
T Consensus 146 ~~~~~~~~~ 154 (166)
T 3qhp_A 146 RMQNEYAKS 154 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=5.1e-05 Score=64.77 Aligned_cols=126 Identities=13% Similarity=0.098 Sum_probs=85.2
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCCC--------CCCCCEEEeccCChh---hhhCCCCeeE
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS--------GKIDKILLKSWAPQR---DILDHPNVKV 85 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~~--------~~~~nv~~~~~~pq~---~lL~h~~~~l 85 (244)
.+++..|+... .+-...+++++...+.++++. |+.... ..++++.+.+|+|+. +++ ..+++
T Consensus 163 ~~i~~vG~~~~-----~Kg~~~li~a~~~~~~~l~i~-G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv 234 (342)
T 2iuy_A 163 DFLLFMGRVSP-----HKGALEAAAFAHACGRRLVLA-GPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHA 234 (342)
T ss_dssp SCEEEESCCCG-----GGTHHHHHHHHHHHTCCEEEE-SCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSE
T ss_pred CEEEEEecccc-----ccCHHHHHHHHHhcCcEEEEE-eCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCE
Confidence 45666777742 344566677776666665554 432110 123799999999876 566 56778
Q ss_pred EEe--------------cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH--cCceeecCCCCCCHHHHHHHHHHHhC
Q psy16503 86 FIS--------------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK--AGFGVTLPYDQITEETVLVALRTVLG 149 (244)
Q Consensus 86 ~It--------------hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~--~G~g~~l~~~~~~~~~l~~ai~~ll~ 149 (244)
++. -|-.+++.||+++|+|+|+.+.. .....+.+ .+.|..++. +.+++.++|.++++
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~~---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTDF---APDEARRTLAGLPA 307 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSCC---CHHHHHHHHHTSCC
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcCC---CHHHHHHHHHHHHH
Confidence 773 23357899999999999998763 35555555 557777754 78999999999986
Q ss_pred ChhHHHHHHHHH
Q psy16503 150 NPSYKKRAEKVA 161 (244)
Q Consensus 150 ~~~y~~~a~~~s 161 (244)
.+++++..
T Consensus 308 ----~~~~~~~~ 315 (342)
T 2iuy_A 308 ----SDEVRRAA 315 (342)
T ss_dssp ----HHHHHHHH
T ss_pred ----HHHHHHHH
Confidence 55555544
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=7.5e-06 Score=71.73 Aligned_cols=94 Identities=20% Similarity=0.220 Sum_probs=68.6
Q ss_pred CCEEEeccCChh-hhhCCCCeeEEEec-----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCH
Q psy16503 64 DKILLKSWAPQR-DILDHPNVKVFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 137 (244)
Q Consensus 64 ~nv~~~~~~pq~-~lL~h~~~~l~Ith-----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 137 (244)
.++.+.++..+. +++ ..+|+++.- +|..++.||+++|+|+|.-|-.++.......+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 357776665444 556 789986541 345789999999999998777777677676666788887763 57
Q ss_pred HHHHHHHHHHhCChhHHHHHHHHHHHH
Q psy16503 138 ETVLVALRTVLGNPSYKKRAEKVARLF 164 (244)
Q Consensus 138 ~~l~~ai~~ll~~~~y~~~a~~~s~~~ 164 (244)
++|.++|.++++| ..++++.+.++..
T Consensus 334 ~~La~ai~~ll~d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 334 TELVTKLTELLSV-KKEIKVEEKSREI 359 (374)
T ss_dssp HHHHHHHHHHHHS-CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHHH
Confidence 9999999999988 6555555544443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.90 E-value=8.1e-05 Score=69.13 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=98.8
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEE--ecCCC-C----------CCCCCCEEEeccCChhhhhC-CC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGEN-M----------SGKIDKILLKSWAPQRDILD-HP 81 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~--~~~~~-~----------~~~~~nv~~~~~~pq~~lL~-h~ 81 (244)
.++|.+|+... +...+.++...+.+++.|..++|. .+... . .+..+.+.+.+..|..+.+. +.
T Consensus 441 ~v~Fg~fn~~~---Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTTM---KLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECST---TCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 46677777654 478899999999999999877774 34211 0 01235788999998776441 26
Q ss_pred CeeEEEe---cCChhhHHHHHHhCCcEEecCCCc-chhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 82 NVKVFIS---HGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 82 ~~~l~It---hgG~~s~~Eal~~gvP~i~vP~~~-dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
.+|+|+. .+|.+|+.||+++|||+|+.|-.. ....-+..+...|+... +.. +.++..+...++.+|+..++.
T Consensus 518 ~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D~~~l~~ 594 (631)
T 3q3e_A 518 NCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAENHQERLE 594 (631)
T ss_dssp TCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHCHHHHHH
T ss_pred cCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCCHHHHHH
Confidence 7889886 378899999999999999997532 22333455666788752 432 578888888889899887777
Q ss_pred HHHHH
Q psy16503 157 AEKVA 161 (244)
Q Consensus 157 a~~~s 161 (244)
+++-.
T Consensus 595 LR~~L 599 (631)
T 3q3e_A 595 LRRYI 599 (631)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00022 Score=63.81 Aligned_cols=149 Identities=12% Similarity=0.070 Sum_probs=91.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC-----C----CCCCCCEE-EeccCChh---hhh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~-----~----~~~~~nv~-~~~~~pq~---~lL 78 (244)
+..+++..|.... .+-...+++++..+ +.++++.-++.. + ...++++. +.++ +.. +++
T Consensus 291 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~ 364 (485)
T 2qzs_A 291 KVPLFAVVSRLTS-----QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIM 364 (485)
T ss_dssp TSCEEEEEEEESG-----GGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHH
T ss_pred CCeEEEEeccCcc-----ccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHH
Confidence 4567777787743 22233444444433 445555433320 1 11346886 6777 433 556
Q ss_pred CCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc---------CceeecCCCCCCHHHHHHHHH
Q psy16503 79 DHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALR 145 (244)
Q Consensus 79 ~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~ 145 (244)
..+|++|.- |...++.||+++|+|+|+... ......+.+. +.|..++.. +.+++.++|.
T Consensus 365 --~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~ 436 (485)
T 2qzs_A 365 --GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIR 436 (485)
T ss_dssp --HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHH
T ss_pred --HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC--CHHHHHHHHH
Confidence 678888843 445789999999999999864 2333444443 578888654 5899999999
Q ss_pred HHh---CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 146 TVL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 146 ~ll---~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+++ .|+..++++.+.+.. +..+....+..+.+
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ 471 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRE 471 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHH
Confidence 999 788877777665543 33554444444443
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00026 Score=63.40 Aligned_cols=148 Identities=14% Similarity=0.085 Sum_probs=91.3
Q ss_pred ceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC-----C----CCCCCCEE-EeccCChh---hhhC
Q psy16503 16 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DILD 79 (244)
Q Consensus 16 ~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~-----~----~~~~~nv~-~~~~~pq~---~lL~ 79 (244)
+.+++..|..... +-...+++++..+ +.++++.-++.. + ...++++. +.++ +.. +++
T Consensus 291 ~~~i~~vGrl~~~-----Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~- 363 (485)
T 1rzu_A 291 SPLFCVISRLTWQ-----KGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQ- 363 (485)
T ss_dssp SCEEEEESCBSTT-----TTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHH-
T ss_pred CeEEEEEccCccc-----cCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHH-
Confidence 4578888888532 2233344444332 445555433321 0 11346887 6777 543 456
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHc---------CceeecCCCCCCHHHHHHHHHH
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALRT 146 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~~ 146 (244)
..+|++|.- |...++.||+++|+|+|+... ......+.+. +.|..++.. +.+++.++|.+
T Consensus 364 -~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ 436 (485)
T 1rzu_A 364 -AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRR 436 (485)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHH
T ss_pred -hcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeCCC--CHHHHHHHHHH
Confidence 678888842 445789999999999999865 2334444443 678888654 58999999999
Q ss_pred Hh---CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 147 VL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 147 ll---~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
++ +|+..++++.+.+.. +..+....+..+.+
T Consensus 437 ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ 470 (485)
T 1rzu_A 437 TVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAA 470 (485)
T ss_dssp HHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHH
Confidence 99 788877777665542 33554444444433
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=70.86 Aligned_cols=155 Identities=10% Similarity=0.022 Sum_probs=95.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCC-----CeEEEEecCCC--------------------CCCCCCCEEEe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN--------------------MSGKIDKILLK 69 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~-----~~viw~~~~~~--------------------~~~~~~nv~~~ 69 (244)
++.+++..|.... .+-...+++|+..+. .++++.-++.. ..+..++|.+.
T Consensus 571 ~~~vIl~vGRl~~-----~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 571 KKPILFTMARLDR-----VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TSCEEEEECCCCT-----TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCeEEEEEccCcc-----cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4668888888843 333556666666553 24444433331 01245789998
Q ss_pred ccCC----hhhhhC--CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHH
Q psy16503 70 SWAP----QRDILD--HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 139 (244)
Q Consensus 70 ~~~p----q~~lL~--h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 139 (244)
++.+ ..++.. ...+++||.- |-..++.||+++|+|+|+.... .....+.+.+.|+.++.. +.++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~G----G~~EiV~dg~~Gllv~p~--D~e~ 719 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVHGKSGFHIDPY--HGDQ 719 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSB----THHHHCCBTTTBEEECTT--SHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCC----ChHHHHccCCcEEEeCCC--CHHH
Confidence 8554 344331 0146777743 4457999999999999997543 234444555678888765 5788
Q ss_pred HHHHHHHHh----CChhHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy16503 140 VLVALRTVL----GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 140 l~~ai~~ll----~~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+.++|.+++ .|+..++++.+.+.....+..+-...+..+.+
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999997666 88888877777666554222454333333333
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00097 Score=57.64 Aligned_cols=107 Identities=14% Similarity=0.196 Sum_probs=72.2
Q ss_pred EEEecCCCCCCCCCCEEEeccCChhhhhCC-CCeeEEEec-CC----------hhhHHHHHHhCCcEEecCCCcchhhHH
Q psy16503 51 IWKWEGENMSGKIDKILLKSWAPQRDILDH-PNVKVFISH-GG----------FLGTTEALYSGVPIIGIPMFGDQKANI 118 (244)
Q Consensus 51 iw~~~~~~~~~~~~nv~~~~~~pq~~lL~h-~~~~l~Ith-gG----------~~s~~Eal~~gvP~i~vP~~~dQ~~na 118 (244)
++.+|+......+ ||.+.+|+|..++... .+++.-+.. -| .+-+.|++++|+|+|+.+ ...++
T Consensus 202 f~ivG~G~~~~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~ 276 (339)
T 3rhz_A 202 LKVYTWQNVELPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQ 276 (339)
T ss_dssp EEEEESCCCCCCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTT
T ss_pred EEEEeCCcccCcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHH
Confidence 3345543323455 9999999998765421 233333332 22 245889999999999865 35677
Q ss_pred HHHHHcCceeecCCCCCCHHHHHHHHHHHhCC--hhHHHHHHHHHHHHhC
Q psy16503 119 RVVEKAGFGVTLPYDQITEETVLVALRTVLGN--PSYKKRAEKVARLFQD 166 (244)
Q Consensus 119 ~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~--~~y~~~a~~~s~~~~~ 166 (244)
..+.+.|.|+.++ +.+++.+++.++..+ ..+++++++.++.++.
T Consensus 277 ~~v~~~~~G~~~~----~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~ 322 (339)
T 3rhz_A 277 ELIENNGLGWIVK----DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK 322 (339)
T ss_dssp HHHHHHTCEEEES----SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHhCCeEEEeC----CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc
Confidence 8889999999986 478899999887533 2356677777776665
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00055 Score=60.65 Aligned_cols=86 Identities=15% Similarity=-0.008 Sum_probs=59.6
Q ss_pred CCCCEEEeccCChhh---hhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~---lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
...++.+.+++|+.+ ++ ..+|+|+.- |=..++.||+++|+|+|+ -..+ ....+.+...|+.++..
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~--~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~- 364 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLL--KRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL- 364 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHH--HHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC-
T ss_pred CcCcEEEcCCCCHHHHHHHH--HhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC-
Confidence 346899999998664 55 678888852 223578999999999998 3322 11233444578888755
Q ss_pred CCHHHHHHHHHHHhCChhHHHH
Q psy16503 135 ITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
+.+++.++|.++++|+..+++
T Consensus 365 -d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 365 -NPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp -SHHHHHHHHHHHHHHTC----
T ss_pred -CHHHHHHHHHHHHcCHHHHHH
Confidence 589999999999988876655
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.004 Score=54.78 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=77.2
Q ss_pred eEEEEcCCCCCCCCCCHHHHHHHHHHH-hcCCC-eEEEEecCCCC--CCCCCCEEEeccCChh---hhhCCCCeeEEEe-
Q psy16503 17 VIYFSMGSIIQGKSFPSDKRKAFLRAF-EQIPQ-RVIWKWEGENM--SGKIDKILLKSWAPQR---DILDHPNVKVFIS- 88 (244)
Q Consensus 17 vI~vs~Gs~~~~~~~~~~~~~~i~~al-~~~~~-~viw~~~~~~~--~~~~~nv~~~~~~pq~---~lL~h~~~~l~It- 88 (244)
.+++..|.... .+.. +.++ +..+. ++++ +|+... .+..+||.+.+++|+. +++ ..+|+++.
T Consensus 223 ~~i~~vGrl~~----~Kg~----~~~l~~~~~~~~l~i-vG~g~~~~~~l~~~V~f~G~~~~~~l~~~~--~~adv~v~p 291 (406)
T 2hy7_A 223 IHAVAVGSMLF----DPEF----FVVASKAFPQVTFHV-IGSGMGRHPGYGDNVIVYGEMKHAQTIGYI--KHARFGIAP 291 (406)
T ss_dssp EEEEEECCTTB----CHHH----HHHHHHHCTTEEEEE-ESCSSCCCTTCCTTEEEECCCCHHHHHHHH--HTCSEEECC
T ss_pred cEEEEEecccc----ccCH----HHHHHHhCCCeEEEE-EeCchHHhcCCCCCEEEcCCCCHHHHHHHH--HhcCEEEEC
Confidence 67888888853 2333 3333 23343 4444 454222 2356799999999865 456 67888875
Q ss_pred --c-CChhhHHHHH-------HhCCcEEecCCCcchhhHHHHHHHcCceee-cCCCCCCHHHHHHHHHHHhCChh
Q psy16503 89 --H-GGFLGTTEAL-------YSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 89 --h-gG~~s~~Eal-------~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
. |-.+++.||+ ++|+|+|+... +.+...|.. ++.+ +.+++.++|.++++|+.
T Consensus 292 s~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 292 YASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp BSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred CCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 2 4457899999 99999999855 444456777 7655 58999999999998876
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=95.23 E-value=0.047 Score=46.13 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=79.2
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-C------CCCCCCCEEEeccCC---hhhhhCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSWAP---QRDILDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~------~~~~~~nv~~~~~~p---q~~lL~h~~~~ 84 (244)
++.|.+.-|+.......|.+...++++.+.+.+.+++...++. + +....+++.+.+-.+ -.+++ .+++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali--~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVL--AGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHH--HTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHH--HhCC
Confidence 5789999998876678899999999998876667777654431 1 111122444443322 23567 7899
Q ss_pred EEEec-CChhhHHHHHHhCCcEEec--CCCcchhhHHHHHHHcCc-eeec-----CCCCCCHHHHHHHHHHHhCC
Q psy16503 85 VFISH-GGFLGTTEALYSGVPIIGI--PMFGDQKANIRVVEKAGF-GVTL-----PYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 85 l~Ith-gG~~s~~Eal~~gvP~i~v--P~~~dQ~~na~~~~~~G~-g~~l-----~~~~~~~~~l~~ai~~ll~~ 150 (244)
++|+. .|...+ |.+.|+|++++ |...... .=.|- ...+ ..++++.+++.+++++++.+
T Consensus 256 l~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~------~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSVDTGLSHL--TAALDRPNITVYGPTDPGLI------GGYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEESSHHHHH--HHHTTCCEEEEESSSCHHHH------CCCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEecCCcHHHH--HHHcCCCEEEEECCCChhhc------CCCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 99998 554434 66699999998 3211110 00010 1111 12467899999999999864
|
| >2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A | Back alignment and structure |
|---|
Probab=93.98 E-value=1.1 Score=34.60 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=43.4
Q ss_pred EEEeccCChhh-hhCCCCeeEEEe-cCChhhHHHH---HHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHH
Q psy16503 66 ILLKSWAPQRD-ILDHPNVKVFIS-HGGFLGTTEA---LYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 140 (244)
Q Consensus 66 v~~~~~~pq~~-lL~h~~~~l~It-hgG~~s~~Ea---l~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 140 (244)
...++.++... ++. ..++.||. -||.||+.|+ +.+++|++++|.+. .....+.........-.+ +.+++
T Consensus 91 ~i~~~~~~~Rk~~m~-~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~--~~~e~ 164 (176)
T 2iz6_A 91 PIVTGLGSARDNINA-LSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA--DVAGA 164 (176)
T ss_dssp EEECCCCSSSCCCCG-GGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES--SHHHH
T ss_pred eEEcCCHHHHHHHHH-HhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC--CHHHH
Confidence 45566666543 333 45556555 6888887765 55999999999843 111222222221111111 56777
Q ss_pred HHHHHHHh
Q psy16503 141 LVALRTVL 148 (244)
Q Consensus 141 ~~ai~~ll 148 (244)
.+.+++.+
T Consensus 165 ~~~l~~~~ 172 (176)
T 2iz6_A 165 IAAVKQLL 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776655
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=93.49 E-value=0.36 Score=40.78 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=60.6
Q ss_pred CCceEEEEcCC-CCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC------C-CCCC----CCE-EEeccCC---hhhh
Q psy16503 14 VNGVIYFSMGS-IIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------M-SGKI----DKI-LLKSWAP---QRDI 77 (244)
Q Consensus 14 ~~~vI~vs~Gs-~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~-~~~~----~nv-~~~~~~p---q~~l 77 (244)
++++|.+.-|+ .......|.+...++++.+.+.+.++++..+..+ + ...+ .++ .+.+..+ ..++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence 35789999998 4344678888888898888766777776533321 1 1111 233 3333332 2356
Q ss_pred hCCCCeeEEEecCChhhHHHHHHhCCcEEec
Q psy16503 78 LDHPNVKVFISHGGFLGTTEALYSGVPIIGI 108 (244)
Q Consensus 78 L~h~~~~l~IthgG~~s~~Eal~~gvP~i~v 108 (244)
+ ..++++|+.- .|.++-|.+.|+|+|++
T Consensus 259 i--~~a~l~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 I--AACKAIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp H--HTSSEEEEES-SHHHHHHHHTTCCEEEE
T ss_pred H--HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 7 6899999973 34567788999999987
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=93.25 E-value=1.5 Score=39.89 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=74.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC---CCeEEEEecCCC---------CCCCCCCEEEeccCChh---hhhC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN---------MSGKIDKILLKSWAPQR---DILD 79 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~---~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~---~lL~ 79 (244)
+..++...|.... .+-...+++++.++ +.++++...++. ....+.++.+....+.. .++
T Consensus 326 ~~p~i~~vgRl~~-----~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 399 (536)
T 3vue_A 326 KIPLIAFIGRLEE-----QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM- 399 (536)
T ss_dssp TSCEEEEECCBSG-----GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH-
T ss_pred CCcEEEEEeeccc-----cCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH-
Confidence 4567777788743 23344455555433 345555433321 11256788888877754 345
Q ss_pred CCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCC--------CCCHHHHHHHHHHH
Q psy16503 80 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD--------QITEETVLVALRTV 147 (244)
Q Consensus 80 h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~--------~~~~~~l~~ai~~l 147 (244)
..+|+|+.- |=..++.||+++|+|+|+-... .....+.+..-|...... ..+.+.|.++|+++
T Consensus 400 -~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 400 -AGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred -HhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 678888863 2235899999999999997653 233444444445543321 12467899999887
Q ss_pred hC
Q psy16503 148 LG 149 (244)
Q Consensus 148 l~ 149 (244)
+.
T Consensus 475 l~ 476 (536)
T 3vue_A 475 IK 476 (536)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=93.15 E-value=0.34 Score=41.55 Aligned_cols=130 Identities=19% Similarity=0.275 Sum_probs=79.7
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCCC-------CCCCCC-EEEeccCC---hhhhhCCCCe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-------SGKIDK-ILLKSWAP---QRDILDHPNV 83 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~~-------~~~~~n-v~~~~~~p---q~~lL~h~~~ 83 (244)
+++|.+.-|+.......|.+...++++.+.+.+.++++..+..+. ...+.+ +.+.+-.+ ..+++ .++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali--~~a 262 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAM--NRC 262 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHH--HTC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHH--HhC
Confidence 579999999877677889888999999887667777763332221 112222 33333222 33566 789
Q ss_pred eEEEec-CChhhHHHHHHhCCcEEec--CCC-------cch------hhHHHHHHHcC---c--eeecCCCCCCHHHHHH
Q psy16503 84 KVFISH-GGFLGTTEALYSGVPIIGI--PMF-------GDQ------KANIRVVEKAG---F--GVTLPYDQITEETVLV 142 (244)
Q Consensus 84 ~l~Ith-gG~~s~~Eal~~gvP~i~v--P~~-------~dQ------~~na~~~~~~G---~--g~~l~~~~~~~~~l~~ 142 (244)
+++|+. .|. ++=|.+.|+|++++ |-. +++ ...|. +...| . +-.--..+++.+++.+
T Consensus 263 ~~~i~~DsG~--~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~ 339 (349)
T 3tov_A 263 NLLITNDSGP--MHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIK 339 (349)
T ss_dssp SEEEEESSHH--HHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHH
T ss_pred CEEEECCCCH--HHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHH
Confidence 999998 444 44488899999997 321 111 11233 33321 1 1111135688999999
Q ss_pred HHHHHhC
Q psy16503 143 ALRTVLG 149 (244)
Q Consensus 143 ai~~ll~ 149 (244)
+++++|.
T Consensus 340 a~~~lL~ 346 (349)
T 3tov_A 340 AAETLLL 346 (349)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998884
|
| >1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=92.58 E-value=2.5 Score=33.23 Aligned_cols=39 Identities=23% Similarity=0.143 Sum_probs=26.6
Q ss_pred cCC-hhhhhCCCCeeEEEe-cCChhhHHHH---HHhCCcEEecCC
Q psy16503 71 WAP-QRDILDHPNVKVFIS-HGGFLGTTEA---LYSGVPIIGIPM 110 (244)
Q Consensus 71 ~~p-q~~lL~h~~~~l~It-hgG~~s~~Ea---l~~gvP~i~vP~ 110 (244)
.++ .+.++. ..+++||. -||.||+.|+ +.+++|+++++.
T Consensus 107 ~f~~Rk~~m~-~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 107 DFQMRSFVLL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CHHHHHHHHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CHHHHHHHHH-HhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 345 444554 45555554 7888888765 669999999974
|
| >1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A | Back alignment and structure |
|---|
Probab=88.24 E-value=2.5 Score=33.73 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=45.3
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHH---------HhCCcEEecCC--Ccch-hhHHHHHHHcCce---
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEAL---------YSGVPIIGIPM--FGDQ-KANIRVVEKAGFG--- 127 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal---------~~gvP~i~vP~--~~dQ-~~na~~~~~~G~g--- 127 (244)
++.+++.++.. .++. ..+++||. -||.||+-|.. .+++|++++-. +.|. ......+.+.|.-
T Consensus 88 ~~~~~~~~~~Rk~~~~-~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~ 166 (216)
T 1ydh_A 88 DVRVVADMHERKAAMA-QEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPG 166 (216)
T ss_dssp EEEEESSHHHHHHHHH-HHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHH
T ss_pred cccccCCHHHHHHHHH-HhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChH
Confidence 35566665544 3333 45666665 78999998887 47999999853 3332 2233556666641
Q ss_pred -----eecCCCCCCHHHHHHHHHH
Q psy16503 128 -----VTLPYDQITEETVLVALRT 146 (244)
Q Consensus 128 -----~~l~~~~~~~~~l~~ai~~ 146 (244)
...+ +.+++.+.|++
T Consensus 167 ~~~~~~~~d----~~ee~~~~l~~ 186 (216)
T 1ydh_A 167 ARNIVVSAP----TAKELMEKMEE 186 (216)
T ss_dssp HHTTEEEES----SHHHHHHHHHH
T ss_pred HcCeEEEeC----CHHHHHHHHHH
Confidence 1111 46666666654
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=87.50 E-value=4.9 Score=37.85 Aligned_cols=84 Identities=10% Similarity=0.089 Sum_probs=47.4
Q ss_pred hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-------cCceeec-CCCCCCHHHHH--
Q psy16503 76 DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-------AGFGVTL-PYDQITEETVL-- 141 (244)
Q Consensus 76 ~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-------~G~g~~l-~~~~~~~~~l~-- 141 (244)
+++ ..+++||.- |-..+..||+++|+|+|+.-..+ ....+.+ .+.|+.+ +.+..+.+++.
T Consensus 514 ~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 514 EFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp HHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred HHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 456 578888864 33468999999999999976533 1111211 1346555 33333555544
Q ss_pred --HHHHHHhC-ChhHHHHHHHHHHHHh
Q psy16503 142 --VALRTVLG-NPSYKKRAEKVARLFQ 165 (244)
Q Consensus 142 --~ai~~ll~-~~~y~~~a~~~s~~~~ 165 (244)
+++..++. ++..+..+++.+....
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A 614 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALS 614 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 44444443 4555555555554443
|
| >3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=87.36 E-value=2.9 Score=32.90 Aligned_cols=44 Identities=18% Similarity=0.312 Sum_probs=30.0
Q ss_pred CEEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecC
Q psy16503 65 KILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIP 109 (244)
Q Consensus 65 nv~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP 109 (244)
..++++.+... .++. ..+|+||. -||.||+-|... +++|++++-
T Consensus 100 ~~i~~~~~~~Rk~~m~-~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 100 ELIVTDTMRERKREME-HRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp EEEEESSHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eeEEcCCHHHHHHHHH-HhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 35555655433 3433 56777777 688999998864 699999884
|
| >3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=87.04 E-value=6.8 Score=30.49 Aligned_cols=43 Identities=19% Similarity=0.312 Sum_probs=29.4
Q ss_pred EEEeccCChh-hhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecC
Q psy16503 66 ILLKSWAPQR-DILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIP 109 (244)
Q Consensus 66 v~~~~~~pq~-~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP 109 (244)
.+.++++... .++. ..+|+||. -||.||+-|... +++|++++-
T Consensus 92 ~i~~~~~~~Rk~~m~-~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 92 LVVTETMWERKQVME-DRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEEESSHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHH-HHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 4455555433 3443 56777777 688999999863 589999883
|
| >1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=84.82 E-value=11 Score=29.14 Aligned_cols=103 Identities=16% Similarity=0.116 Sum_probs=54.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC----CCCC-CCCCEEEeccCChh-hhhCCCCeeEEEe
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSG-KIDKILLKSWAPQR-DILDHPNVKVFIS 88 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~----~~~~-~~~nv~~~~~~pq~-~lL~h~~~~l~It 88 (244)
.+..+|+.|... -......++..+.+-.++=..+.. +..+ ..++...++.++.. .++. ..+++||.
T Consensus 32 ~g~~lV~GGg~~-------GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~~-~~sda~Iv 103 (191)
T 1t35_A 32 QGIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMS-ELADGFIS 103 (191)
T ss_dssp TTCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHHH-HHCSEEEE
T ss_pred CCCEEEECCCcc-------cHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCccccCCCHHHHHHHHH-HHCCEEEE
Confidence 467778777652 234455555444444443333321 1111 12234455656544 4443 45666666
Q ss_pred -cCChhhHHHHHH---------hCCcEEecCC--Ccchhh-HHHHHHHcC
Q psy16503 89 -HGGFLGTTEALY---------SGVPIIGIPM--FGDQKA-NIRVVEKAG 125 (244)
Q Consensus 89 -hgG~~s~~Eal~---------~gvP~i~vP~--~~dQ~~-na~~~~~~G 125 (244)
-||.||+-|... +++|++++.. +.|... ..+.+.+.|
T Consensus 104 lPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~G 153 (191)
T 1t35_A 104 MPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEG 153 (191)
T ss_dssp CSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTT
T ss_pred eCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCC
Confidence 788999887643 7899999853 333222 224455555
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=84.79 E-value=3.2 Score=39.04 Aligned_cols=139 Identities=9% Similarity=0.026 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCeEEEEecC---CC--CCCCCCCEE-EeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecC
Q psy16503 36 RKAFLRAFEQIPQRVIWKWEG---EN--MSGKIDKIL-LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP 109 (244)
Q Consensus 36 ~~~i~~al~~~~~~viw~~~~---~~--~~~~~~nv~-~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP 109 (244)
++.+.+.+.. ++.++.+... .. ....++.+. +.++.+-.++| ..+|+.||--. +.+.|.+..++|+|...
T Consensus 566 ~~~l~~~l~~-~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll--~~aD~lITDyS-Sv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 566 LDNLYKELGD-DYVILLRMHYLISNALDLSGYENFAIDVSNYNDVSELF--LISDCLITDYS-SVMFDYGILKRPQFFFA 641 (729)
T ss_dssp HHHHHHHHTT-TEEEEECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHH--HTCSEEEESSC-THHHHHGGGCCCEEEEC
T ss_pred HHHHHHHcCC-CeEEEEecCcchhccccccccCCcEEeCCCCcCHHHHH--HHhCEEEeech-HHHHhHHhhCCCEEEec
Confidence 4555565542 4455555432 11 222333443 34455667888 78999999854 47999999999999987
Q ss_pred CCcchhhHHHHHHHcCceeecCCCC-------CCHHHHHHHHHHHhCC-hhHHHHHHHHHHHHhC-CCCChHHHHHHHHH
Q psy16503 110 MFGDQKANIRVVEKAGFGVTLPYDQ-------ITEETVLVALRTVLGN-PSYKKRAEKVARLFQD-RPMPPLDTAIYWIE 180 (244)
Q Consensus 110 ~~~dQ~~na~~~~~~G~g~~l~~~~-------~~~~~l~~ai~~ll~~-~~y~~~a~~~s~~~~~-~~~~~~~~a~~~ie 180 (244)
.-.|+... + --|...+..+ -+.++|.++|++...+ ..|+++.+++.+.+.. ....+.+++++.|.
T Consensus 642 ~D~~~Y~~-----~-~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~ 715 (729)
T 3l7i_A 642 YDIDKYDK-----G-LRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIH 715 (729)
T ss_dssp TTTTTTTS-----S-CCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHH
T ss_pred CCHHHHhh-----c-cCCcccChhHhCCCCeECCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHH
Confidence 65555432 1 1233333221 2679999999988753 5678888888887753 22567778777665
Q ss_pred HHHH
Q psy16503 181 HVIR 184 (244)
Q Consensus 181 ~~~~ 184 (244)
....
T Consensus 716 ~~~~ 719 (729)
T 3l7i_A 716 KDIK 719 (729)
T ss_dssp HHHH
T ss_pred hcCc
Confidence 4443
|
| >2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* | Back alignment and structure |
|---|
Probab=83.69 E-value=0.9 Score=37.53 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=40.0
Q ss_pred CCeeEEEecCChhhHHHHHHh------CCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 81 PNVKVFISHGGFLGTTEALYS------GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~------gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
..+|++|+=||=||+.+++.. ++|++++|.- . .|. ..++.++++.++++.+++.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~--lgf---l~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H--LGF---YADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S--CCS---SCCBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C--CCc---CCcCCHHHHHHHHHHHHcC
Confidence 568999999999999999875 8999999861 0 121 1234567788888888754
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=83.59 E-value=24 Score=31.44 Aligned_cols=88 Identities=14% Similarity=0.130 Sum_probs=56.5
Q ss_pred EE-EeccCChhh---hhCCCCeeEEEec---CCh-hhHHHHHHhCC-----cEEecCCCc--chhhHHHHHHHcCceeec
Q psy16503 66 IL-LKSWAPQRD---ILDHPNVKVFISH---GGF-LGTTEALYSGV-----PIIGIPMFG--DQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 66 v~-~~~~~pq~~---lL~h~~~~l~Ith---gG~-~s~~Eal~~gv-----P~i~vP~~~--dQ~~na~~~~~~G~g~~l 130 (244)
+. +..++|+.+ ++ ..+|+|+.- =|+ .++.||+++|+ |+|+-...+ ++. .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly--~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIF--RYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIV 401 (482)
T ss_dssp EEEECSCCCHHHHHHHH--HHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEE
T ss_pred EEEeCCCCCHHHHHHHH--HHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEE
Confidence 55 457788765 44 667888763 343 58999999998 677665433 222 146777
Q ss_pred CCCCCCHHHHHHHHHHHhCCh-hHH-HHHHHHHHHHhC
Q psy16503 131 PYDQITEETVLVALRTVLGNP-SYK-KRAEKVARLFQD 166 (244)
Q Consensus 131 ~~~~~~~~~l~~ai~~ll~~~-~y~-~~a~~~s~~~~~ 166 (244)
++. +.+.+.++|.++++++ .-+ +..++..+.+..
T Consensus 402 ~p~--d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 402 NPY--DRDEVAAALDRALTMSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp CTT--CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 665 5899999999999853 333 333444444433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 244 | ||||
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 2e-35 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 3e-27 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 1e-26 | |
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 9e-26 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 2e-23 | |
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 6e-22 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 2e-21 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 128 bits (322), Expect = 2e-35
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 18/183 (9%)
Query: 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG--------ENMSGKIDKILLK 69
+Y S G++ + P + A A E IW + ++
Sbjct: 268 VYISFGTVT---TPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVV 324
Query: 70 SWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI-RVVEKAGFGV 128
WAPQ ++L H V F++H G+ E++ GVP+I P FGDQ+ N V + GV
Sbjct: 325 PWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 384
Query: 129 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL--FQDRPMPP----LDTAIYWIEHV 182
+ T+ ++ +L KK E + L DR + P + I ++ V
Sbjct: 385 RIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 444
Query: 183 IRH 185
+
Sbjct: 445 SKP 447
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 105 bits (262), Expect = 3e-27
Identities = 35/168 (20%), Positives = 51/168 (30%), Gaps = 6/168 (3%)
Query: 17 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRD 76
++ GS + K + + W + D +
Sbjct: 239 PVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQA 298
Query: 77 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 136
+ V I HG A +GVP + IP DQ V G GV T
Sbjct: 299 LFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT 356
Query: 137 EETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
E++ AL TVL P + RAE VA + A + +
Sbjct: 357 FESLSAALTTVL-APETRARAEAVAGMVLTDGAA---AAADLVLAAVG 400
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 104 bits (258), Expect = 1e-26
Identities = 37/156 (23%), Positives = 53/156 (33%), Gaps = 7/156 (4%)
Query: 31 FPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKI--DKILLKSWAPQRDILDHPNVKVFIS 88
P+D + + A +RVI ++ + + V I
Sbjct: 250 APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIH 307
Query: 89 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 148
HGG T A +G P I +P DQ V + G GV T +++ AL T L
Sbjct: 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL 367
Query: 149 GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 184
P RA VA R A ++ V R
Sbjct: 368 -TPETHARATAVAGTI--RTDGAAVAARLLLDAVSR 400
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 102 bits (254), Expect = 9e-26
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 17/174 (9%)
Query: 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW---------- 52
+ + V+Y + GS ++ F + +W
Sbjct: 276 TECLDWLESKEPGSVVYVNFGSTT---VMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGG 332
Query: 53 --KWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPM 110
+ E + D+ L+ SW PQ +L+HP++ F++H G+ TTE++ +GVP++ P
Sbjct: 333 SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 392
Query: 111 FGDQKANI-RVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 163
F DQ + + + G+ + + E + + V+ KK +K L
Sbjct: 393 FADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGDKGKKMKQKAMEL 445
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 96.0 bits (237), Expect = 2e-23
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW---------EGENMSGKIDKILL 68
+ G SF + + + R +W K ++
Sbjct: 275 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMI 334
Query: 69 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI-RVVEKAGFG 127
WAPQ ++L H + F+SH G+ E+++ GVPI+ P++ +Q+ N R+V++ G G
Sbjct: 335 CGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 394
Query: 128 VTLPYDQ------ITEETVLVALRTVLGNPS-YKKRAEKVARLFQD 166
+ L D + E + L+ ++ S K+ +++ + ++
Sbjct: 395 LGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 440
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 91.7 bits (226), Expect = 6e-22
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 32/192 (16%)
Query: 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW------ 54
+K ++ + V+Y S GS + ++ QR +W
Sbjct: 249 EESECLKWLDNQPLGSVLYVSFGSGG---TLTCEQLNELALGLADSEQRFLWVIRSPSGI 305
Query: 55 -------------------EGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGT 95
G K ++ WAPQ +L HP+ F++H G+ T
Sbjct: 306 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNST 365
Query: 96 TEALYSGVPIIGIPMFGDQKANIR-VVEKAGFGVTLPYDQ---ITEETVLVALRTVLGNP 151
E++ SG+P+I P++ +QK N + E + + E V ++ ++
Sbjct: 366 LESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE 425
Query: 152 SYKKRAEKVARL 163
K K+ L
Sbjct: 426 EGKGVRNKMKEL 437
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 89.7 bits (221), Expect = 2e-21
Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Query: 22 MGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW--KWEGENMSGKIDKILLKSWAPQRDILD 79
+G + +D K ++A +R++ W + + +++
Sbjct: 226 VGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELFG 285
Query: 80 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGD----QKANIRVVEKAGFGVTLPYDQI 135
V I H T A+ +G+P I + D Q + V + G GV +
Sbjct: 286 R--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVP 343
Query: 136 TEETVLVALRTVLGNPSYKKRAEKVARLFQ 165
T +++ AL T L P + RA VA +
Sbjct: 344 TIDSLSAALDTAL-APEIRARATTVADTIR 372
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 244 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 99.97 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.97 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.97 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.97 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.95 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.83 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.63 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 98.39 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.83 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 97.56 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 97.54 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.31 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 96.87 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 95.97 | |
| d2q4oa1 | 183 | Hypothetical protein At2g37210/T2N18.3 {Thale cres | 88.6 | |
| d1rcua_ | 170 | Hypothetical protein TM1055 {Thermotoga maritima [ | 88.55 | |
| d1qkka_ | 140 | Transcriptional regulatory protein DctD, receiver | 86.96 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 85.27 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 85.27 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 85.2 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 82.89 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 81.88 | |
| d1yioa2 | 128 | Response regulatory protein StyR, N-terminal domai | 80.46 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=5.7e-37 Score=272.39 Aligned_cols=181 Identities=25% Similarity=0.433 Sum_probs=154.8
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---CCC-----CCCCCEEEeccCC
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---NMS-----GKIDKILLKSWAP 73 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---~~~-----~~~~nv~~~~~~p 73 (244)
++++..|+...+ +++||+++||... .+.+.+..++.+++..+++|+|++... .++ ..+.|+.+.+|+|
T Consensus 252 ~~~~~~~~~~~~~~~~v~~s~gs~~~---~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~p 328 (450)
T d2c1xa1 252 TTGCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAP 328 (450)
T ss_dssp --CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCC
T ss_pred hhhhccccccCCccceeeeccccccc---CCHHHHHHHHHHHHhcCCeEEEEECCCccccCChhhhhhccccccccccCC
Confidence 345778888764 7899999999965 678899999999999999999998752 222 2467999999999
Q ss_pred hhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 74 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 74 q~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
|.++|.||++++||||||.||++||+++|||+|++|+++||+.||+++++ .|+|+.++.+++|.++|.++|+++|+|++
T Consensus 329 q~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~~ 408 (450)
T d2c1xa1 329 QAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEK 408 (450)
T ss_dssp HHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHH
T ss_pred hHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999999999999999999999999999986 59999999999999999999999999998
Q ss_pred HHH---HHHHHHHHHhCCCC----ChHHHHHHHHHHHHHcCC
Q psy16503 153 YKK---RAEKVARLFQDRPM----PPLDTAIYWIEHVIRHGG 187 (244)
Q Consensus 153 y~~---~a~~~s~~~~~~~~----~~~~~a~~~ie~~~~~~~ 187 (244)
|++ +++++++..+ +|. ++.+.+++|+||+.||+.
T Consensus 409 y~~~~~r~~~l~~~~~-~a~~~~gss~~~~~~~~e~v~r~~~ 449 (450)
T d2c1xa1 409 GKKLRENLRALRETAD-RAVGPKGSSTENFITLVDLVSKPKD 449 (450)
T ss_dssp HHHHHHHHHHHHHHHH-HHTSTTCHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHH-HhccCCCCHHHHHHHHHHHHhhhcC
Confidence 875 5555544432 333 348999999999999974
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=4.8e-33 Score=246.98 Aligned_cols=158 Identities=23% Similarity=0.493 Sum_probs=138.4
Q ss_pred HHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-------CC-----CCCCCEEEecc
Q psy16503 5 DIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------MS-----GKIDKILLKSW 71 (244)
Q Consensus 5 ~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-------~~-----~~~~nv~~~~~ 71 (244)
+...|+.... .+++++++||... ...+..+.++.+++.++.+|+|+++... ++ ..+.|+++.+|
T Consensus 277 ~~~~~~~~~~~~~~v~~~~gs~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~ 353 (473)
T d2pq6a1 277 ECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASW 353 (473)
T ss_dssp HHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESC
T ss_pred HHHHHhhhcCCCceeeeccCcccc---ccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchhhccCceEEeee
Confidence 4455665544 6789999999855 6788999999999999999999986521 11 13579999999
Q ss_pred CChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCCCCCHHHHHHHHHHHhCC
Q psy16503 72 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQITEETVLVALRTVLGN 150 (244)
Q Consensus 72 ~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~ll~~ 150 (244)
+||.++|.||+|++||||||.||++||+++|||||++|+++||+.||+++++ .|+|+.++ .++|.++|.++|+++|+|
T Consensus 354 ~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~-~~~t~~~l~~ai~~vl~d 432 (473)
T d2pq6a1 354 CPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAG 432 (473)
T ss_dssp CCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTS
T ss_pred CCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC-CCcCHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999965 59999998 479999999999999999
Q ss_pred hh---HHHHHHHHHHHHhC
Q psy16503 151 PS---YKKRAEKVARLFQD 166 (244)
Q Consensus 151 ~~---y~~~a~~~s~~~~~ 166 (244)
++ ||+||+++++++++
T Consensus 433 ~~~~~~r~~a~~l~~~~~~ 451 (473)
T d2pq6a1 433 DKGKKMKQKAMELKKKAEE 451 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 75 99999999998874
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=7.2e-31 Score=232.98 Aligned_cols=161 Identities=22% Similarity=0.431 Sum_probs=139.3
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC-------------------CC--
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------------------MS-- 60 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~-------------------~~-- 60 (244)
.+++.+|++... .+++++++|+... .......++..++...+..++|...... ++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 326 (471)
T d2vcha1 250 ESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPG 326 (471)
T ss_dssp -CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTT
T ss_pred chhHHHHHHhcCCccccccccccccC---CCHHHHHHHHHHHHhhcCCeEEEeccccccccccccccccccchhhhCCch
Confidence 356788888764 7899999999965 4567788899999999999999886421 11
Q ss_pred ----CCCCCEEEeccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHH-cCceeecCCCC-
Q psy16503 61 ----GKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQ- 134 (244)
Q Consensus 61 ----~~~~nv~~~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~-~G~g~~l~~~~- 134 (244)
..++|+++.+|+||.++|.||+|++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.+...+
T Consensus 327 ~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~ 406 (471)
T d2vcha1 327 FLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD 406 (471)
T ss_dssp HHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred hhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCC
Confidence 135789999999999999999999999999999999999999999999999999999999965 69999997654
Q ss_pred --CCHHHHHHHHHHHhCChh---HHHHHHHHHHHHhC
Q psy16503 135 --ITEETVLVALRTVLGNPS---YKKRAEKVARLFQD 166 (244)
Q Consensus 135 --~~~~~l~~ai~~ll~~~~---y~~~a~~~s~~~~~ 166 (244)
++.++|.++|+++|+|++ ||+||++++++.+.
T Consensus 407 ~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~ 443 (471)
T d2vcha1 407 GLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACR 443 (471)
T ss_dssp SCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 899999999999999975 99999999988874
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.97 E-value=2.7e-31 Score=231.34 Aligned_cols=173 Identities=24% Similarity=0.208 Sum_probs=152.6
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++..|++... ++||+++||... ....+..+.+++++...+..++|..+.. .....++|+++.+|+||.++|
T Consensus 226 ~~~~~~~l~~~~-~~v~~~~gs~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll-- 300 (401)
T d1rrva_ 226 PPELEAFLAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF-- 300 (401)
T ss_dssp CHHHHHHHHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--
T ss_pred CHHHHHhhccCC-CeEEEECCcccc--CCHHHHHHHHHHHHhhcCCeEEEeccccccccccCCCCEEEEeccCcHHHh--
Confidence 467889998765 799999999854 2345778888999999998888877653 344678999999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++++||||||.||+.||+++|||+|++|+++||+.||+++++.|+|+.++..++++++|.++|+++| +++|+++++++
T Consensus 301 ~~~~~~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl-~~~~r~~a~~~ 379 (401)
T d1rrva_ 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVL-APETRARAEAV 379 (401)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHT-SHHHHHHHHHH
T ss_pred hhccEEEecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh-CHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999 57899999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
++.++. ++..++++.||..+.
T Consensus 380 ~~~~~~---~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 380 AGMVLT---DGAAAAADLVLAAVG 400 (401)
T ss_dssp TTTCCC---CHHHHHHHHHHHHHH
T ss_pred HHHHhh---cCHHHHHHHHHHHhC
Confidence 988864 678999999998764
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.97 E-value=3.7e-30 Score=227.76 Aligned_cols=162 Identities=24% Similarity=0.469 Sum_probs=139.4
Q ss_pred chHHHHHHhcCC-CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC--CC-------CCCCCEEEeccC
Q psy16503 3 ETDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MS-------GKIDKILLKSWA 72 (244)
Q Consensus 3 p~~l~~~l~~~~-~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~--~~-------~~~~nv~~~~~~ 72 (244)
++++..|++... ..++++++|+... ..+.+.+..++.+++..+++++|...... .+ ..+.|+.+..|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~ 338 (461)
T d2acva1 261 HDLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWA 338 (461)
T ss_dssp HHHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSC
T ss_pred cHHHHHHHhhCCccceeeeecccccc--CCCHHHHHHHHHHHHhcCccEEEEeecccccCCccchhhhccCCCeEEEecC
Confidence 346778888764 5678888888743 46789999999999999999999977532 11 246799999999
Q ss_pred ChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHH-HHcCceeecCCCC------CCHHHHHHHHH
Q psy16503 73 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTLPYDQ------ITEETVLVALR 145 (244)
Q Consensus 73 pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~-~~~G~g~~l~~~~------~~~~~l~~ai~ 145 (244)
||.++|.||+|++||||||+||++||+++|||||++|+++||+.||+|+ ++.|+|+.++.+. +|.++|.++|+
T Consensus 339 pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~ 418 (461)
T d2acva1 339 PQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLK 418 (461)
T ss_dssp CHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHH
T ss_pred CHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 5679999987543 79999999999
Q ss_pred HHhCC-hhHHHHHHHHHHHHhC
Q psy16503 146 TVLGN-PSYKKRAEKVARLFQD 166 (244)
Q Consensus 146 ~ll~~-~~y~~~a~~~s~~~~~ 166 (244)
++|++ +.||+||+++++++++
T Consensus 419 ~vl~~d~~~r~~a~~l~~~~r~ 440 (461)
T d2acva1 419 DLMDKDSIVHKKVQEMKEMSRN 440 (461)
T ss_dssp HHTCTTCTHHHHHHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHHH
Confidence 99975 5699999999998874
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.97 E-value=1.1e-29 Score=220.25 Aligned_cols=170 Identities=24% Similarity=0.262 Sum_probs=143.3
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
+.+...|++... ++|++++|+.. .+.+..+.++++++..+..++|..+.. .....++|+++.+|+||.++|
T Consensus 227 ~~~~~~~~~~~~-~~i~~~~~~~~----~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~~l-- 299 (401)
T d1iira_ 227 SPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF-- 299 (401)
T ss_dssp CHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHG--
T ss_pred CHHHHHhhccCC-CeEEEccCccc----cchHHHHHHHHHHHHcCCeEEEeccCCccccccCCCCEEEEeccCHHHHH--
Confidence 345667777654 78999999985 367889999999999999999987653 334578899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 160 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~ 160 (244)
+++++||||||.||++||+++|+|+|++|+++||+.||+++++.|+|+.++..++|.++|.++|+++| +++|+++++++
T Consensus 300 ~~~~~~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l-~~~~~~~a~~~ 378 (401)
T d1iira_ 300 GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL-TPETHARATAV 378 (401)
T ss_dssp GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHT-SHHHHHHHHHH
T ss_pred hhcCEEEecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh-CHHHHHHHHHH
Confidence 55999999999999999999999999999999999999999999999999999999999999999999 56799999999
Q ss_pred HHHHhCCCCChHHHHHHHHHHHH
Q psy16503 161 ARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 161 s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
++.++. .++ ..++..++..+
T Consensus 379 ~~~~~~--~~~-~~aa~~i~~~i 398 (401)
T d1iira_ 379 AGTIRT--DGA-AVAARLLLDAV 398 (401)
T ss_dssp HHHSCS--CHH-HHHHHHHHHHH
T ss_pred HHHHHh--cCh-HHHHHHHHHHH
Confidence 999986 344 44555444443
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.95 E-value=4.7e-28 Score=210.01 Aligned_cols=174 Identities=20% Similarity=0.227 Sum_probs=150.5
Q ss_pred chHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC--CCCCCCCCEEEeccCChhhhhCC
Q psy16503 3 ETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKSWAPQRDILDH 80 (244)
Q Consensus 3 p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~--~~~~~~~nv~~~~~~pq~~lL~h 80 (244)
|+++..|....+ +.|++++|+... ....+....++.++...+.+++|..+.. .....++|+.+.+|+||.++|
T Consensus 210 ~~~~~~~~~~~~-~~v~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p~~~ll-- 284 (391)
T d1pn3a_ 210 SAELEAFLAAGS-TPVYVGFGSSSR--PATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELF-- 284 (391)
T ss_dssp CHHHHHHTTSSS-CCEEEECTTCCS--THHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCCHHHHH--
T ss_pred CHHHhhhhccCC-CeEEEecccccc--ccHHHHHHHHHHHHHhcCCEEEEeccccccccccCCCCEEEecccCHHHHH--
Confidence 456777776654 789999999954 2346777888899999998888876642 234578899999999999999
Q ss_pred CCeeEEEecCChhhHHHHHHhCCcEEecCCCcc----hhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHH
Q psy16503 81 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGD----QKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 156 (244)
Q Consensus 81 ~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~d----Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~ 156 (244)
+.+++||||||+||++||+++|+|+|++|+.+| |+.||+++++.|+|+.++..+++.++|.++|+++| +++|+++
T Consensus 285 ~~a~~~v~hgG~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l-~~~~r~~ 363 (391)
T d1pn3a_ 285 GRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTAL-APEIRAR 363 (391)
T ss_dssp TTSSCEEEESCHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHT-STTHHHH
T ss_pred hhccEEEecCchHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHh-CHHHHHH
Confidence 669999999999999999999999999999887 99999999999999999999999999999999999 5679999
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy16503 157 AEKVARLFQDRPMPPLDTAIYWIEHVIRH 185 (244)
Q Consensus 157 a~~~s~~~~~~~~~~~~~a~~~ie~~~~~ 185 (244)
++++++.++. ++.++|++.||..++.
T Consensus 364 a~~~a~~~~~---~g~~~aa~~i~~~l~~ 389 (391)
T d1pn3a_ 364 ATTVADTIRA---DGTTVAAQLLFDAVSL 389 (391)
T ss_dssp HHHHGGGSCS---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---cCHHHHHHHHHHHHHh
Confidence 9999988864 6889999999988764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=6.6e-20 Score=156.37 Aligned_cols=161 Identities=16% Similarity=0.126 Sum_probs=119.7
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCC-C--------CCCCCCCEEEeccCChh-hhhCCC
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGE-N--------MSGKIDKILLKSWAPQR-DILDHP 81 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~-~--------~~~~~~nv~~~~~~pq~-~lL~h~ 81 (244)
..+..+++.+||.. .....+.+.+.+..++. ...+..... . ....+.|+.+.+|.++. ++| +
T Consensus 175 ~~~~~i~~~~gs~g-----~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm--~ 247 (351)
T d1f0ka_ 175 EGPVRVLVVGGSQG-----ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--A 247 (351)
T ss_dssp CSSEEEEEECTTTC-----CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--H
T ss_pred cCCcccccccccch-----hhhhHHHHHHhhhhhcccceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHH--H
Confidence 34567777777773 23444555555554432 223333321 1 12356788999998755 566 8
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCC---cchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
.+|++|||||.+|++|++++|+|+|++|+. +||..||+++++.|+|+.++.++++.+.|.++|.++ +++...++.
T Consensus 248 ~adl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~ 325 (351)
T d1f0ka_ 248 WADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMA 325 (351)
T ss_dssp HCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHH
T ss_pred hCchhhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh--CHHHHHHHH
Confidence 999999999999999999999999999975 489999999999999999999999999999999886 444455555
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
+.++.+.. .++.++++++|+.+.+
T Consensus 326 ~~~~~~~~--~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 326 ERARAASI--PDATERVANEVSRVAR 349 (351)
T ss_dssp HHHHHTCC--TTHHHHHHHHHHHHHT
T ss_pred HHHHccCC--ccHHHHHHHHHHHHHh
Confidence 55555544 4688999999999876
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=2.2e-07 Score=77.22 Aligned_cols=155 Identities=14% Similarity=0.217 Sum_probs=99.6
Q ss_pred CCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-----eEEEEecCCCC---------CCCCCCEEEeccCChh-hh
Q psy16503 13 SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-----RVIWKWEGENM---------SGKIDKILLKSWAPQR-DI 77 (244)
Q Consensus 13 ~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-----~viw~~~~~~~---------~~~~~nv~~~~~~pq~-~l 77 (244)
.+++.+++..|.... .+-...+++++..+.. .+++..++... .+...++.+..+.++. ++
T Consensus 192 ~~~~~~i~~~gr~~~-----~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 266 (370)
T d2iw1a1 192 KEQQNLLLQVGSDFG-----RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSEL 266 (370)
T ss_dssp CTTCEEEEEECSCTT-----TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CccceEEEEEecccc-----ccchhhhcccccccccccccceeeeccccccccccccccccccccccccccccccccccc
Confidence 345778888888843 3336667777766642 33333333211 1235678888776543 56
Q ss_pred hCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH
Q psy16503 78 LDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 78 L~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y 153 (244)
+ ..+|+++.- |-.+++.||+++|+|+|+.+..+ ....+.+.+.|..+.. .-+.+++.++|.++++|+..
T Consensus 267 ~--~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g----~~e~i~~~~~G~l~~~-~~d~~~la~~i~~ll~d~~~ 339 (370)
T d2iw1a1 267 M--AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSPL 339 (370)
T ss_dssp H--HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHHH
T ss_pred c--ccccccccccccccccceeeecccCCeeEEEeCCCC----hHHHhcCCCceEEEcC-CCCHHHHHHHHHHHHcCHHH
Confidence 6 567887752 44589999999999999976543 3455667778876532 12689999999999999887
Q ss_pred HHHHHHHHHHHhC--CCCChHHHHHHHH
Q psy16503 154 KKRAEKVARLFQD--RPMPPLDTAIYWI 179 (244)
Q Consensus 154 ~~~a~~~s~~~~~--~~~~~~~~a~~~i 179 (244)
++++.+.++.+.+ ...+-.+.+.+.+
T Consensus 340 ~~~~~~~ar~~~~~~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 340 RMAWAENARHYADTQDLYSLPEKAADII 367 (370)
T ss_dssp HHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 7766665554432 1134445555444
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.39 E-value=1.8e-06 Score=65.03 Aligned_cols=130 Identities=18% Similarity=0.244 Sum_probs=87.5
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecC-CCCC-----------CCCCCEEEeccCChhh---hhCCC
Q psy16503 18 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEG-ENMS-----------GKIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 18 I~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~-~~~~-----------~~~~nv~~~~~~pq~~---lL~h~ 81 (244)
-++..|... +..-.+.++++++.++. ++++ ++. ...+ ..++|+++.+|+|..+ ++ .
T Consensus 14 ~~l~iGrl~-----~~K~~~~~i~a~~~l~~~~l~i-vg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~ 85 (166)
T d2f9fa1 14 FWLSVNRIY-----PEKRIELQLEVFKKLQDEKLYI-VGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY--S 85 (166)
T ss_dssp CEEEECCSS-----GGGTHHHHHHHHHHCTTSCEEE-EBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH--H
T ss_pred EEEEEecCc-----cccCHHHHHHHHHHhcCCeEEE-EEecccccchhhhhhhhcccccCcEEEeeccccccccccc--c
Confidence 356778874 34556777888888875 4443 442 1110 1357999999999754 55 4
Q ss_pred CeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh-HHHH
Q psy16503 82 NVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS-YKKR 156 (244)
Q Consensus 82 ~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~-y~~~ 156 (244)
.++++|.- |...++.||+++|+|+|+.+..+ ....+.....|...+. +.+++.++|.++++|++ ++++
T Consensus 86 ~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~~~g~~~~~---d~~~~~~~i~~l~~~~~~~~~~ 158 (166)
T d2f9fa1 86 RCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINEKTGYLVNA---DVNEIIDAMKKVSKNPDKFKKD 158 (166)
T ss_dssp HCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBTTTEEEECS---CHHHHHHHHHHHHHCTTTTHHH
T ss_pred cccccccccccccccccccccccccccceeecCCc----ceeeecCCcccccCCC---CHHHHHHHHHHHHhCHHHHHHH
Confidence 56666653 33569999999999999986633 3333455567776643 58999999999999854 6666
Q ss_pred HHHHHH
Q psy16503 157 AEKVAR 162 (244)
Q Consensus 157 a~~~s~ 162 (244)
+.+-++
T Consensus 159 ~~~~a~ 164 (166)
T d2f9fa1 159 CFRRAK 164 (166)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 665554
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.83 E-value=0.00014 Score=61.55 Aligned_cols=111 Identities=11% Similarity=0.011 Sum_probs=70.5
Q ss_pred CCCCEEEeccCChh---hhhCCCCeeEEEec----CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCC
Q psy16503 62 KIDKILLKSWAPQR---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 134 (244)
Q Consensus 62 ~~~nv~~~~~~pq~---~lL~h~~~~l~Ith----gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~ 134 (244)
.+.++.+..+.|.. .++ ..+++++.- |..+++.||+++|+|+|+....+ ... +.+.+.|..++..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~--~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~----~~e-~i~~~~G~~~~~~- 378 (437)
T d2bisa1 307 HGNVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG----LRD-IITNETGILVKAG- 378 (437)
T ss_dssp CTTEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTT----HHH-HCCTTTCEEECTT-
T ss_pred cccceeccccCcHHHHHHHH--hhhccccccccccccchHHHHHHHCCCCEEEeCCCC----cHH-hEECCcEEEECCC-
Confidence 45566777777764 455 567777754 44579999999999999876543 223 2334678888654
Q ss_pred CCHHHHHHHHHHHhC-ChhHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy16503 135 ITEETVLVALRTVLG-NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 183 (244)
Q Consensus 135 ~~~~~l~~ai~~ll~-~~~y~~~a~~~s~~~~~~~~~~~~~a~~~ie~~~ 183 (244)
+.+++.++|.+++. |++.++.+.+.++....+ .+ .+..+.-.+.+.
T Consensus 379 -d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~-~s-~~~~a~~~~~iY 425 (437)
T d2bisa1 379 -DPGELANAILKALELSRSDLSKFRENCKKRAMS-FS-WEKSAERYVKAY 425 (437)
T ss_dssp -CHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHH-SC-HHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC-HHHHHHHHHHHH
Confidence 58999999999886 555444444444443322 34 344444444343
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=0.00038 Score=58.84 Aligned_cols=156 Identities=13% Similarity=0.079 Sum_probs=102.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcC-C-CeEEEEecCCC--------CCCCCCCEEEeccCChhh---hhCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-P-QRVIWKWEGEN--------MSGKIDKILLKSWAPQRD---ILDHP 81 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~-~-~~viw~~~~~~--------~~~~~~nv~~~~~~pq~~---lL~h~ 81 (244)
++.+++++-..... ...+....+++.+... + ..++|-..... .....+|+.+.+.++..+ +| .
T Consensus 195 ~~~~lvt~hr~~n~--~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll--~ 270 (373)
T d1v4va_ 195 GPYVTVTMHRRENW--PLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM--R 270 (373)
T ss_dssp SCEEEECCCCGGGG--GGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH--H
T ss_pred ccceeEEecccccc--chHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHh--h
Confidence 57888888765331 1223334444444333 3 35665544321 113456899998888665 45 6
Q ss_pred CeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHH
Q psy16503 82 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 161 (244)
Q Consensus 82 ~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s 161 (244)
+|+++|+.+|. .+.||.+.|+|+|.+.-.++.+.. .+.|..+.+.. +.+++.++++.++++++++.++.+..
T Consensus 271 ~s~~vignSss-gi~Ea~~lg~P~Inir~~~eRqeg----~~~g~nvlv~~---d~~~I~~~i~~~l~~~~~~~~~~~~~ 342 (373)
T d1v4va_ 271 ASLLLVTDSGG-LQEEGAALGVPVVVLRNVTERPEG----LKAGILKLAGT---DPEGVYRVVKGLLENPEELSRMRKAK 342 (373)
T ss_dssp TEEEEEESCHH-HHHHHHHTTCCEEECSSSCSCHHH----HHHTSEEECCS---CHHHHHHHHHHHHTCHHHHHHHHHSC
T ss_pred hceeEecccch-hhhcchhhcCcEEEeCCCccCHHH----HhcCeeEEcCC---CHHHHHHHHHHHHcCHHHHhhcccCC
Confidence 89999999876 477999999999999665544442 23565555433 68999999999999999988877755
Q ss_pred HHHhCCCCChHHHHHHHHHHHHH
Q psy16503 162 RLFQDRPMPPLDTAIYWIEHVIR 184 (244)
Q Consensus 162 ~~~~~~~~~~~~~a~~~ie~~~~ 184 (244)
.-+-| ..+.++.++.+..-+.
T Consensus 343 npYGd--G~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 343 NPYGD--GKAGLMVARGVAWRLG 363 (373)
T ss_dssp CSSCC--SCHHHHHHHHHHHHTT
T ss_pred CCCCC--CHHHHHHHHHHHHHhC
Confidence 44444 4566777776665443
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=97.54 E-value=0.00094 Score=50.68 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=60.0
Q ss_pred CCCEEEeccCChh---hhhCCCCeeEEEe----cCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCC
Q psy16503 63 IDKILLKSWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 135 (244)
Q Consensus 63 ~~nv~~~~~~pq~---~lL~h~~~~l~It----hgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~ 135 (244)
+..+.+..++|.. .++ ..++++|. .|-.+++.||+++|+|+|+--. ... .-+.+.+.|..++..
T Consensus 91 ~~~~~~~~~~~~~~l~~~~--~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~-~e~i~~~~g~~~~~~-- 161 (196)
T d2bfwa1 91 GNVKVITEMLSREFVRELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGL-RDIITNETGILVKAG-- 161 (196)
T ss_dssp TTEEEECSCCCHHHHHHHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHH-HHHCCTTTCEEECTT--
T ss_pred ceeEEeeeccccccchhcc--ccccccccccccccccccchhhhhcCceeeecCC----Ccc-ceeecCCceeeECCC--
Confidence 4455666777754 455 77888884 4556899999999999998643 112 223345678887654
Q ss_pred CHHHHHHHHHHHhC-ChhHHHHHHH
Q psy16503 136 TEETVLVALRTVLG-NPSYKKRAEK 159 (244)
Q Consensus 136 ~~~~l~~ai~~ll~-~~~y~~~a~~ 159 (244)
+.+++.++|.+++. ++..++++.+
T Consensus 162 ~~~~l~~~i~~~l~~~~~~~~~~~~ 186 (196)
T d2bfwa1 162 DPGELANAILKALELSRSDLSKFRE 186 (196)
T ss_dssp CHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 67999999999886 5544444433
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.31 E-value=0.00066 Score=57.40 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=89.5
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-eEEEEecCC--------CCCCCCCCEEEeccCChhh---hhCCCC
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGE--------NMSGKIDKILLKSWAPQRD---ILDHPN 82 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~-~viw~~~~~--------~~~~~~~nv~~~~~~pq~~---lL~h~~ 82 (244)
++.+++++-.......-.......+...+...+. .++|..... ......+|+.+.+.++..+ +| .+
T Consensus 198 ~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll--k~ 275 (377)
T d1o6ca_ 198 DKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFA--AK 275 (377)
T ss_dssp SEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHH--HH
T ss_pred CceEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHH--hh
Confidence 4677887754432212123445556666666554 444443321 1223567999999988665 56 67
Q ss_pred eeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHHHHHH
Q psy16503 83 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 162 (244)
Q Consensus 83 ~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~~~s~ 162 (244)
|+++|+..|.+ +.||.+.|+|+|.+--..|++.- .+.|.-+.++. +.+++.++++++++++.+.+++.+...
T Consensus 276 s~~vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~----~~~g~nilv~~---~~~~I~~~i~~~l~~~~~~~~~~~~~n 347 (377)
T d1o6ca_ 276 SHFILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG----VEAGTLKLAGT---DEENIYQLAKQLLTDPDEYKKMSQASN 347 (377)
T ss_dssp CSEEEEC--CH-HHHGGGGTCCEEEECSCCC---C----TTTTSSEEECS---CHHHHHHHHHHHHHCHHHHHHHHHCCC
T ss_pred hheeecccchh-HHhhhhhhceEEEeCCCCcCcch----hhcCeeEECCC---CHHHHHHHHHHHHhChHHHhhhccCCC
Confidence 99999998876 88999999999999554444431 23455555433 689999999999999888777766443
Q ss_pred HHhCCCCChHHHHHHHH
Q psy16503 163 LFQDRPMPPLDTAIYWI 179 (244)
Q Consensus 163 ~~~~~~~~~~~~a~~~i 179 (244)
-+-+ .++.++.++.+
T Consensus 348 pYGd--G~as~rI~~~L 362 (377)
T d1o6ca_ 348 PYGD--GEASRRIVEEL 362 (377)
T ss_dssp TTCC--SCHHHHHHHHH
T ss_pred CCCC--ChHHHHHHHHH
Confidence 3333 34455555444
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.87 E-value=0.007 Score=51.90 Aligned_cols=143 Identities=15% Similarity=0.091 Sum_probs=85.0
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCCC---------CCCCCCCEEEeccCChhhh-hCCCCee
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---------MSGKIDKILLKSWAPQRDI-LDHPNVK 84 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~~l-L~h~~~~ 84 (244)
+..+++..|....-+. .+.+++++... .+.+.++++.-.++. ....+.++.+..+.+.... +....+|
T Consensus 290 ~~~~i~~vgrl~~~KG-~~~Ll~a~~~~-~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 367 (477)
T d1rzua_ 290 GSPLFCVISRLTWQKG-IDLMAEAVDEI-VSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCD 367 (477)
T ss_dssp SSCEEEEESCBSTTTT-HHHHHTTHHHH-HHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCS
T ss_pred CccEEEEEeeeeecCC-cHHHHHHHHHH-HhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCc
Confidence 4567778888854222 22223323222 333556655444321 0125678888877765422 1126788
Q ss_pred EEEecC---C-hhhHHHHHHhCCcEEecCCCc--c---hhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhC---Chh
Q psy16503 85 VFISHG---G-FLGTTEALYSGVPIIGIPMFG--D---QKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG---NPS 152 (244)
Q Consensus 85 l~Ithg---G-~~s~~Eal~~gvP~i~vP~~~--d---Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~---~~~ 152 (244)
+|+.-. | ..++.||+++|+|+|+--..+ | ...+.......+.|...+.. +.++|.++|+++++ |++
T Consensus 368 ~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~--d~~~la~ai~~~l~~~~~~~ 445 (477)
T d1rzua_ 368 AIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRRTVRYYHDPK 445 (477)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHHHHHHHTCHH
T ss_pred cccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCC--CHHHHHHHHHHHHhhhCCHH
Confidence 988864 2 358899999999999865421 1 12233344445678888765 58999999998774 666
Q ss_pred HHHHHHHHH
Q psy16503 153 YKKRAEKVA 161 (244)
Q Consensus 153 y~~~a~~~s 161 (244)
.++++.+.+
T Consensus 446 ~~~~~~~~a 454 (477)
T d1rzua_ 446 LWTQMQKLG 454 (477)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666655443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=95.97 E-value=0.016 Score=48.47 Aligned_cols=150 Identities=11% Similarity=0.144 Sum_probs=94.3
Q ss_pred CceEEEEcCCCCCCCCCCHHHHHHHHHHHhc---CCC--eEEEEecCCC--------CCCCCCCEEEeccCChhh---hh
Q psy16503 15 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ---IPQ--RVIWKWEGEN--------MSGKIDKILLKSWAPQRD---IL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~---~~~--~viw~~~~~~--------~~~~~~nv~~~~~~pq~~---lL 78 (244)
++.+++++=.. ++.. +.++.+..++.. ... .++|-..... .....+|+.+.+-+++.+ +|
T Consensus 205 ~~~ilvt~H~~---~~~~-~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll 280 (376)
T d1f6da_ 205 KKMILVTGHRR---ESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (376)
T ss_dssp SEEEEECCCCB---SSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CceEEEecccc---hhhh-hhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHH
Confidence 57889887543 2233 334445554433 223 4455433211 113467899988887665 56
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhHHHHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 158 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y~~~a~ 158 (244)
..|+++|+..|. ...||.+.|+|+|.+--..+|+. ++ +.|.-+.+. .+.+++.+++.+++.++.+++.+.
T Consensus 281 --~~a~~vignSss-gi~Ea~~lg~P~Inir~~ter~~---~~-~~g~~i~v~---~~~~~I~~ai~~~l~~~~~~~~~~ 350 (376)
T d1f6da_ 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERPE---AV-TAGTVRLVG---TDKQRIVEEVTRLLKDENEYQAMS 350 (376)
T ss_dssp --HHCSEEEESSSG-GGGTGGGGTCCEEECSSCCSCHH---HH-HHTSEEECC---SSHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --hhceEEEecCcc-hHhhHHHhCCCEEEcCCCccCcc---ce-ecCeeEECC---CCHHHHHHHHHHHHhChHhhhhhc
Confidence 678999998876 47799999999998844445554 33 345444443 368999999999998887777666
Q ss_pred HHHHHHhCCCCChHHHHHHHHH
Q psy16503 159 KVARLFQDRPMPPLDTAIYWIE 180 (244)
Q Consensus 159 ~~s~~~~~~~~~~~~~a~~~ie 180 (244)
+...-+-+ .++.++.++.++
T Consensus 351 ~~~npYGd--G~as~rI~~iLk 370 (376)
T d1f6da_ 351 RAHNPYGD--GQACSRILEALK 370 (376)
T ss_dssp HSCCTTCC--SCHHHHHHHHHH
T ss_pred cCCCCCCC--ChHHHHHHHHHH
Confidence 54433433 345666655544
|
| >d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At2g37210/T2N18.3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.60 E-value=1.9 Score=31.60 Aligned_cols=60 Identities=17% Similarity=0.219 Sum_probs=34.7
Q ss_pred EEEeccCC-hhhhhCCCCeeEEEe-cCChhhHHHHHH---------hCCcEEecC---CCcchhhHHHHHHHcCc
Q psy16503 66 ILLKSWAP-QRDILDHPNVKVFIS-HGGFLGTTEALY---------SGVPIIGIP---MFGDQKANIRVVEKAGF 126 (244)
Q Consensus 66 v~~~~~~p-q~~lL~h~~~~l~It-hgG~~s~~Eal~---------~gvP~i~vP---~~~dQ~~na~~~~~~G~ 126 (244)
+..++.+. ....|. ..+++||. -||.||+-|... +.+|++++= +|.+=......+.+.|.
T Consensus 86 ~~~~~~~~~Rk~~m~-~~sdafIvlPGG~GTLdEl~e~lt~~ql~~~~kpiiiln~~gfw~~l~~~l~~~~~~g~ 159 (183)
T d2q4oa1 86 VRAVADMHQRKAEMA-KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGF 159 (183)
T ss_dssp EEEESSHHHHHHHHH-HTCSEEEECSCCHHHHHHHHHHHHHHHHTSCCCCEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred eeecccHHHHHHHHH-HhCceEEEeCCcchhHHHHHHHHHHHHhcCCCCCeEEeecCccHHHHHHHHHHHHHCCC
Confidence 44444443 334444 56777777 799999998865 468887762 33322223344555554
|
| >d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein TM1055 species: Thermotoga maritima [TaxId: 2336]
Probab=88.55 E-value=1.9 Score=31.13 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhcCCCeEEEEecCCCCCCCCCC--EEEe-ccCChhhhhCCCCeeEEEe-cCChhhHHH---HHHhCCcEE
Q psy16503 34 DKRKAFLRAFEQIPQRVIWKWEGENMSGKIDK--ILLK-SWAPQRDILDHPNVKVFIS-HGGFLGTTE---ALYSGVPII 106 (244)
Q Consensus 34 ~~~~~i~~al~~~~~~viw~~~~~~~~~~~~n--v~~~-~~~pq~~lL~h~~~~l~It-hgG~~s~~E---al~~gvP~i 106 (244)
-...++.+...+.+-+++=..+.....+.--+ +... ++.....+|. ..+|+||. -||.||+.| ++..++|++
T Consensus 46 GlM~ava~ga~~~gg~viGilP~~~~~n~~~~~~i~~~~~~~~Rk~~m~-~~sda~I~lPGG~GTl~El~~a~~l~KPii 124 (170)
T d1rcua_ 46 GVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLL-RNADVVVSIGGEIGTAIEILGAYALGKPVI 124 (170)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHhcCCccccccchhhccCcccceeEEeccchhhhHHHHh-hcccceeeeccccchHHHHHHHHHhCCceE
Confidence 34566666655555444443443222221112 2222 2222334443 56777766 677999887 566899999
Q ss_pred ecC
Q psy16503 107 GIP 109 (244)
Q Consensus 107 ~vP 109 (244)
++.
T Consensus 125 lln 127 (170)
T d1rcua_ 125 LLR 127 (170)
T ss_dssp EET
T ss_pred Eec
Confidence 884
|
| >d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Transcriptional regulatory protein DctD, receiver domain species: Sinorhizobium meliloti [TaxId: 382]
Probab=86.96 E-value=3.4 Score=28.40 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=68.2
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHH--HHHhCCc
Q psy16503 32 PSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTE--ALYSGVP 104 (244)
Q Consensus 32 ~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~E--al~~gvP 104 (244)
.......+...|+..++.+....++. .+...+..+.+.++ +|..+ |...+.+ .....+|
T Consensus 9 d~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlil~D~~mP~~~--------------G~el~~~lr~~~~~~p 74 (140)
T d1qkka_ 9 DRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMD--------------GLALFRKILALDPDLP 74 (140)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCCSSSC--------------HHHHHHHHHHHCTTSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCChHHHHHHHhccCcchHHHhhccCCCC--------------HHHHHHHHHHhCCCCc
Confidence 45666777777888888887765442 24455667888887 45442 2211111 2345789
Q ss_pred EEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChhH
Q psy16503 105 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 153 (244)
Q Consensus 105 ~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~y 153 (244)
+|++--..|. ..+..+.+.|+--.+.+ .++.++|..++++++.....
T Consensus 75 vI~lT~~~~~-~~~~~a~~~Ga~dyl~K-P~~~~~L~~~i~~~~~~~~~ 121 (140)
T d1qkka_ 75 MILVTGHGDI-PMAVQAIQDGAYDFIAK-PFAADRLVQSARRAEEKRRL 121 (140)
T ss_dssp EEEEECGGGH-HHHHHHHHTTCCEEEES-SCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCH-HHHHHHHHcCCCEeecC-CCCHHHHHHHHHHHHHHHHH
Confidence 9998666665 45566667787655543 46889999999998854433
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=85.27 E-value=0.76 Score=36.46 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=76.8
Q ss_pred CceEEEEcCCCCCC-CCCCHHHHHHHHHHHhcCCCeEEEEecCCC------CC-CC----CCCEEE-ecc--CC-hhhhh
Q psy16503 15 NGVIYFSMGSIIQG-KSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------MS-GK----IDKILL-KSW--AP-QRDIL 78 (244)
Q Consensus 15 ~~vI~vs~Gs~~~~-~~~~~~~~~~i~~al~~~~~~viw~~~~~~------~~-~~----~~nv~~-~~~--~p-q~~lL 78 (244)
++.|++..|+.... ..+|.+...++++.+.+.+..+++..+.++ .. .. ..++.- .+- +. ...++
T Consensus 180 ~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~el~~li 259 (348)
T d1pswa_ 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILI 259 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHH
T ss_pred CCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccCCccHHHHHHHH
Confidence 67888888866433 578988888999988877667666543321 00 01 122221 111 22 23566
Q ss_pred CCCCeeEEEecCChhhHHHHHHhCCcEEec--CCC-------cch------hhHHHHHHHc----CceeecCCCCCCHHH
Q psy16503 79 DHPNVKVFISHGGFLGTTEALYSGVPIIGI--PMF-------GDQ------KANIRVVEKA----GFGVTLPYDQITEET 139 (244)
Q Consensus 79 ~h~~~~l~IthgG~~s~~Eal~~gvP~i~v--P~~-------~dQ------~~na~~~~~~----G~g~~l~~~~~~~~~ 139 (244)
.+++++|+.=+ |.++-|.+.|+|+|++ |.. +++ ...+..+.+. |-..+ ..+++.++
T Consensus 260 --~~a~l~I~~Dt-g~~HlAaa~g~p~i~lfg~~~~~~~~P~~~~~~~l~~~~~c~~c~~~~~~~~~~~c--~~~I~~~~ 334 (348)
T d1pswa_ 260 --AACKAIVTNDS-GLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQS--LIDITPQR 334 (348)
T ss_dssp --HTSSEEEEESS-HHHHHHHHTTCCEEEEESSSCTTSSCCCCTTEEEEESSCC----------CCCCHH--HHTSCHHH
T ss_pred --hcceeEeecCc-cHHHHHHHcCCCEEEEECCCCHhhhCCCCCCeEEEecCCCCCcccCCCCCCCchhh--HhCCCHHH
Confidence 68999999744 4689999999999998 431 111 1111111110 00001 13678899
Q ss_pred HHHHHHHHhCCh
Q psy16503 140 VLVALRTVLGNP 151 (244)
Q Consensus 140 l~~ai~~ll~~~ 151 (244)
+.++++++|.++
T Consensus 335 V~~~~~~lL~~~ 346 (348)
T d1pswa_ 335 VLEELNALLLQE 346 (348)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhccC
Confidence 999999888543
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=85.27 E-value=9 Score=31.72 Aligned_cols=143 Identities=15% Similarity=0.111 Sum_probs=81.7
Q ss_pred cCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCC---e-EEEEecCCCC--------------------------CC
Q psy16503 12 ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---R-VIWKWEGENM--------------------------SG 61 (244)
Q Consensus 12 ~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~---~-viw~~~~~~~--------------------------~~ 61 (244)
..+++.++++.|.....+. ....++++-..+++.|. . ++...+.... .+
T Consensus 250 ~~~~~~~il~V~Rld~~KG-i~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~ 328 (456)
T d1uqta_ 250 ELKNVQNIFSVERLDYSKG-LPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLG 328 (456)
T ss_dssp HTTTCEEEEEECCBCGGGC-HHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTT
T ss_pred hcCCCeEEEEeCCCchhhc-hHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 3345678899998854322 23445555555555553 2 3333332110 12
Q ss_pred CCCCEEEeccCChhhhhC-CCCeeEEEe---cCC-hhhHHHHHHhCCc-----EEecCCCc--chhhHHHHHHHcCceee
Q psy16503 62 KIDKILLKSWAPQRDILD-HPNVKVFIS---HGG-FLGTTEALYSGVP-----IIGIPMFG--DQKANIRVVEKAGFGVT 129 (244)
Q Consensus 62 ~~~nv~~~~~~pq~~lL~-h~~~~l~It---hgG-~~s~~Eal~~gvP-----~i~vP~~~--dQ~~na~~~~~~G~g~~ 129 (244)
..+.+.+...+++.++.+ -..+++++. .-| ..+..|++++|+| +|+-.+.+ ++. +-|+.
T Consensus 329 ~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l---------~~g~l 399 (456)
T d1uqta_ 329 WTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALI 399 (456)
T ss_dssp BCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEE
T ss_pred CCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh---------CCeEE
Confidence 234566667777665431 145666665 334 4678999999999 44444432 222 23777
Q ss_pred cCCCCCCHHHHHHHHHHHhCCh--hHHHHHHHHHHHHhC
Q psy16503 130 LPYDQITEETVLVALRTVLGNP--SYKKRAEKVARLFQD 166 (244)
Q Consensus 130 l~~~~~~~~~l~~ai~~ll~~~--~y~~~a~~~s~~~~~ 166 (244)
+++. +.+.+.++|.++|+++ ..++.+++..+.+..
T Consensus 400 VnP~--d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~ 436 (456)
T d1uqta_ 400 VNPY--DRDEVAAALDRALTMSLAERISRHAEMLDVIVK 436 (456)
T ss_dssp ECTT--CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred ECcC--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 7765 6899999999999854 234444555555543
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=85.20 E-value=4.1 Score=28.01 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=67.0
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC---C---------CCCCCCCEEE
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---N---------MSGKIDKILL 68 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~---~---------~~~~~~nv~~ 68 (244)
||.++++++|.+.+ .+.+|..++. +...-..+++.+.+.++.+.-..... + +.+.|..+.+
T Consensus 1 M~d~~i~~~L~~pk-sIAVVGaS~~------~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~ 73 (136)
T d1iuka_ 1 MNDQELRAYLSQAK-TIAVLGAHKD------PSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDI 73 (136)
T ss_dssp CCHHHHHHHHHHCC-EEEEETCCSS------TTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSE
T ss_pred CCHHHHHHHHhCCC-eEEEEeecCC------CCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCce
Confidence 78999999998754 4555544333 34456667777877887654432211 1 1111111111
Q ss_pred -eccCChhhhhCCCCeeEEEecCChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeecC
Q psy16503 69 -KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLP 131 (244)
Q Consensus 69 -~~~~pq~~lL~h~~~~l~IthgG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l~ 131 (244)
.-++|..... ..+-|++..|++.+.+..-..+..-++++.+.|+-++-+
T Consensus 74 v~v~~p~~~v~--------------~~v~~~~~~g~k~i~~q~G~~~~e~~~~a~~~Gi~vV~~ 123 (136)
T d1iuka_ 74 LDVFRPPSALM--------------DHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIPVVAD 123 (136)
T ss_dssp EEECSCHHHHT--------------TTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCCEEES
T ss_pred EEEeccHHHHH--------------HHHHHHHhhCCCeEEEecCccCHHHHHHHHHcCCEEEcC
Confidence 1123333332 468888999999888866666777889999999977753
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.89 E-value=5.6 Score=27.45 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=64.7
Q ss_pred CCchHHHHHHhcCCCceEEEEcCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEEecCC-CCCCCCCCEEEeccCChhhhhC
Q psy16503 1 MNETDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-NMSGKIDKILLKSWAPQRDILD 79 (244)
Q Consensus 1 ~~p~~l~~~l~~~~~~vI~vs~Gs~~~~~~~~~~~~~~i~~al~~~~~~viw~~~~~-~~~~~~~nv~~~~~~pq~~lL~ 79 (244)
|++++++++|.+.+ .+.+| ..|. -+...-..++..+.+.+++++-.-+.. +.. ....++- -.++-
T Consensus 7 msd~~i~~~L~~~k-sIAVV-GaS~-----~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~----G~~~~~s--l~dlp- 72 (139)
T d2d59a1 7 LTDEDIREILTRYK-KIALV-GASP-----KPERDANIVMKYLLEHGYDVYPVNPKYEEVL----GRKCYPS--VLDIP- 72 (139)
T ss_dssp CCHHHHHHHHHHCC-EEEEE-TCCS-----CTTSHHHHHHHHHHHTTCEEEEECTTCSEET----TEECBSS--GGGCS-
T ss_pred CCHHHHHHHHhcCC-eEEEE-eecC-----CCCCchHHHHHHHHHCCCEEEEECCcccccC----CCccccc--ccccC-
Confidence 67889999997764 44444 3343 234556667777777888754433221 111 1111111 11111
Q ss_pred CCCeeEEE--ec--CChhhHHHHHHhCCcEEecCCCcchhhHHHHHHHcCceeec
Q psy16503 80 HPNVKVFI--SH--GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL 130 (244)
Q Consensus 80 h~~~~l~I--th--gG~~s~~Eal~~gvP~i~vP~~~dQ~~na~~~~~~G~g~~l 130 (244)
...|+++ .. -....+-|++..|++.+.+..-.....-.+.+.+.|+-++-
T Consensus 73 -~~iD~v~i~vp~~~~~~~~~e~~~~g~k~v~~~~G~~~ee~~~~a~~~gi~vig 126 (139)
T d2d59a1 73 -DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNREASKKADEAGLIIVA 126 (139)
T ss_dssp -SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHHHHHHHHHTTCEEEE
T ss_pred -ccceEEEEEeCHHHHHHHHHHHHHhCCCEEEEeccccCHHHHHHHHHCCCEEEc
Confidence 1122211 11 12356788899999988886666666778888888886664
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=81.88 E-value=4 Score=29.49 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=36.2
Q ss_pred CEEEeccCCh-hhhhCCCCeeEEEe-cCChhhHHHHHHh---------CCcEEecC---CCcchhhHHHHHHHcCc
Q psy16503 65 KILLKSWAPQ-RDILDHPNVKVFIS-HGGFLGTTEALYS---------GVPIIGIP---MFGDQKANIRVVEKAGF 126 (244)
Q Consensus 65 nv~~~~~~pq-~~lL~h~~~~l~It-hgG~~s~~Eal~~---------gvP~i~vP---~~~dQ~~na~~~~~~G~ 126 (244)
+...++.+.+ ...+. ..+|+||. -||.||+-|.... .+|++++- +|.+=....+.+.+.|.
T Consensus 80 ~~~~~~~~~~Rk~~m~-~~sdafI~lPGG~GTLdEl~e~l~~~ql~~~~kPiil~n~~gfw~~l~~~l~~~~~~gf 154 (179)
T d1t35a_ 80 ELIEVNGMHERKAKMS-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGF 154 (179)
T ss_dssp EEEEESHHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTS
T ss_pred eeeeeccHHHHHHHHH-HhcCeEEEecCccchhhHHHHHHHHHHhhccCCCeEeecCCccHHHHHHHHHHHHHcCC
Confidence 4444554433 33443 45677776 7999999998764 57988873 33322333455566664
|
| >d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: Response regulatory protein StyR, N-terminal domain species: Pseudomonas fluorescens [TaxId: 294]
Probab=80.46 E-value=3.7 Score=27.57 Aligned_cols=104 Identities=19% Similarity=0.128 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHhcCCCeEEEEecCC----CCCCCCCCEEEecc-CChhhhhCCCCeeEEEecCChhhHHHHHHh---CC
Q psy16503 32 PSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALYS---GV 103 (244)
Q Consensus 32 ~~~~~~~i~~al~~~~~~viw~~~~~----~~~~~~~nv~~~~~-~pq~~lL~h~~~~l~IthgG~~s~~Eal~~---gv 103 (244)
.....+.+...|+..++++....++. .+...+.++.+.++ +|..+ | ..+.+.+.. ..
T Consensus 11 d~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~~dliilD~~mp~~~--------------G-~~~~~~i~~~~~~~ 75 (128)
T d1yioa2 11 DMSVREGLRNLLRSAGFEVETFDCASTFLEHRRPEQHGCLVLDMRMPGMS--------------G-IELQEQLTAISDGI 75 (128)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHCCTTSCEEEEEESCCSSSC--------------H-HHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHcCCCccccccHHHHHHHHHhcCCCEeehhhhcccch--------------h-HHHHHHHHhhCCCC
Confidence 45667778888888888876554432 13345567888876 45432 1 133444433 34
Q ss_pred cEEecCCCcchhhHHHHHHHcCceeecCCCCCCHHHHHHHHHHHhCChh
Q psy16503 104 PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 152 (244)
Q Consensus 104 P~i~vP~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~~~~ 152 (244)
|++++--. +....+....+.|+--.+.+ -++.++|..+|+++++...
T Consensus 76 ~ii~lt~~-~~~~~~~~a~~~Ga~dyl~K-P~~~~~L~~~i~~~l~~~~ 122 (128)
T d1yioa2 76 PIVFITAH-GDIPMTVRAMKAGAIEFLPK-PFEEQALLDAIEQGLQLNA 122 (128)
T ss_dssp CEEEEESC-TTSCCCHHHHHTTEEEEEES-SCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEE-CCHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHHHHH
Confidence 55554333 33445556678888666654 5789999999999985433
|