Psyllid ID: psy1651
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 141 | ||||||
| 347965281 | 1348 | AGAP007587-PA [Anopheles gambiae str. PE | 0.723 | 0.075 | 0.757 | 8e-37 | |
| 320543709 | 1354 | protein kinase related to protein kinase | 0.801 | 0.083 | 0.692 | 4e-36 | |
| 161076448 | 1501 | protein kinase related to protein kinase | 0.801 | 0.075 | 0.692 | 5e-36 | |
| 189235408 | 1066 | PREDICTED: similar to protein kinase N2 | 0.808 | 0.106 | 0.686 | 5e-36 | |
| 281362976 | 1284 | protein kinase related to protein kinase | 0.801 | 0.088 | 0.692 | 5e-36 | |
| 242022370 | 1059 | conserved hypothetical protein [Pediculu | 0.794 | 0.105 | 0.699 | 8e-36 | |
| 270004278 | 936 | hypothetical protein TcasGA2_TC003607 [T | 0.773 | 0.116 | 0.715 | 1e-35 | |
| 345488814 | 1831 | PREDICTED: hypothetical protein LOC10011 | 0.829 | 0.063 | 0.663 | 3e-35 | |
| 383860305 | 1758 | PREDICTED: serine/threonine-protein kina | 0.836 | 0.067 | 0.674 | 4e-35 | |
| 307177860 | 1747 | Serine/threonine-protein kinase N2 [Camp | 0.836 | 0.067 | 0.674 | 4e-35 |
| >gi|347965281|ref|XP_308283.5| AGAP007587-PA [Anopheles gambiae str. PEST] gi|333466431|gb|EAA03911.6| AGAP007587-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/103 (75%), Positives = 95/103 (92%), Gaps = 1/103 (0%)
Query: 20 GDYIRHPVLYELSHKYGFITENVAEEALPNKLEELKEHIRKEIRKELKIKEGAEKLREVA 79
GDYI+HPVLYELSHKYG + +NV+E+ LP++LEE+KE IR+EIRKELKIKEGAEKLREVA
Sbjct: 47 GDYIKHPVLYELSHKYG-LPDNVSEQLLPDRLEEIKEAIRREIRKELKIKEGAEKLREVA 105
Query: 80 RDRKSLSDVATIVKKSNSKLSELHNELQELESQIIMTQGQTVT 122
DR+SLSDVA+IVKKSN+KL+EL +EL ELESQII+TQG +V+
Sbjct: 106 TDRRSLSDVASIVKKSNNKLAELKSELHELESQIILTQGNSVS 148
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|320543709|ref|NP_001188896.1| protein kinase related to protein kinase N, isoform K [Drosophila melanogaster] gi|318068555|gb|ADV37144.1| protein kinase related to protein kinase N, isoform K [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|161076448|ref|NP_001097237.1| protein kinase related to protein kinase N, isoform G [Drosophila melanogaster] gi|157400248|gb|ABV53735.1| protein kinase related to protein kinase N, isoform G [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|189235408|ref|XP_971016.2| PREDICTED: similar to protein kinase N2 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|281362976|ref|NP_001163095.1| protein kinase related to protein kinase N, isoform H [Drosophila melanogaster] gi|272432404|gb|ACZ94373.1| protein kinase related to protein kinase N, isoform H [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|242022370|ref|XP_002431613.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516921|gb|EEB18875.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|270004278|gb|EFA00726.1| hypothetical protein TcasGA2_TC003607 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|345488814|ref|XP_001599463.2| PREDICTED: hypothetical protein LOC100114442 [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|383860305|ref|XP_003705631.1| PREDICTED: serine/threonine-protein kinase N-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|307177860|gb|EFN66820.1| Serine/threonine-protein kinase N2 [Camponotus floridanus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 141 | ||||||
| FB|FBgn0020621 | 1190 | Pkn "Protein kinase related to | 0.773 | 0.091 | 0.526 | 1.3e-22 | |
| UNIPROTKB|B1AL79 | 604 | PKN2 "Serine/threonine-protein | 0.368 | 0.086 | 0.519 | 2.8e-08 | |
| UNIPROTKB|F1MFK1 | 981 | PKN2 "Uncharacterized protein" | 0.368 | 0.053 | 0.538 | 4.2e-08 | |
| UNIPROTKB|Q16513 | 984 | PKN2 "Serine/threonine-protein | 0.368 | 0.052 | 0.519 | 5.4e-08 | |
| UNIPROTKB|F1S4D4 | 969 | PKN2 "Uncharacterized protein" | 0.368 | 0.053 | 0.519 | 1.1e-07 | |
| RGD|620146 | 985 | Pkn2 "protein kinase N2" [Ratt | 0.368 | 0.052 | 0.5 | 3e-07 | |
| UNIPROTKB|O08874 | 985 | Pkn2 "Serine/threonine-protein | 0.368 | 0.052 | 0.5 | 3e-07 | |
| MGI|MGI:109211 | 983 | Pkn2 "protein kinase N2" [Mus | 0.368 | 0.052 | 0.5 | 3.8e-07 | |
| ZFIN|ZDB-GENE-061013-393 | 977 | zgc:153916 "zgc:153916" [Danio | 0.361 | 0.052 | 0.509 | 4.8e-07 | |
| UNIPROTKB|F1LPA4 | 983 | Pkn2 "Serine/threonine-protein | 0.326 | 0.046 | 0.543 | 6.2e-07 |
| FB|FBgn0020621 Pkn "Protein kinase related to protein kinase N" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 275 (101.9 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 60/114 (52%), Positives = 74/114 (64%)
Query: 10 NDRYYWISSEGDYIRHPVLYELSHKYGFITENVAEEALPNXXXXXXXXXXXXXXXXXXXX 69
+D YY +G+YI+HPVLYELSHKYGF TEN+ E +
Sbjct: 2 SDSYY----QGEYIKHPVLYELSHKYGF-TENLPESCMSIRLEEIKEAIRREIRKELKIK 56
Query: 70 XGAEKLREVARDRKSLSDVATIVKKSNSKLSELHNELQELESQIIMTQGQTVTS 123
GAEKLREVA+DR+SLSDVA +VKKS SKL+EL +ELQELESQI++T T +
Sbjct: 57 EGAEKLREVAKDRRSLSDVAVLVKKSKSKLAELKSELQELESQILLTSANTAVN 110
|
|
| UNIPROTKB|B1AL79 PKN2 "Serine/threonine-protein kinase N2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MFK1 PKN2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q16513 PKN2 "Serine/threonine-protein kinase N2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S4D4 PKN2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| RGD|620146 Pkn2 "protein kinase N2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O08874 Pkn2 "Serine/threonine-protein kinase N2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:109211 Pkn2 "protein kinase N2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-061013-393 zgc:153916 "zgc:153916" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1LPA4 Pkn2 "Serine/threonine-protein kinase N2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 141 | |||
| cd11622 | 66 | cd11622, HR1_PKN_1, First Protein kinase C-related | 6e-26 | |
| smart00742 | 57 | smart00742, Hr1, Rho effector or protein kinase C- | 1e-10 | |
| pfam02185 | 60 | pfam02185, HR1, Hr1 repeat | 2e-08 | |
| cd00089 | 68 | cd00089, HR1, Protein kinase C-related kinase homo | 8e-08 | |
| cd11633 | 85 | cd11633, HR1_Rhophilin-1, Protein kinase C-related | 2e-04 |
| >gnl|CDD|212012 cd11622, HR1_PKN_1, First Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 6e-26
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 50 KLEELKEHIRKEIRKELKIKEGAEKLREVARDRKSLSDVATIVKKSNSKLSELHNELQEL 109
KLEELKE IR+EIRKELKIKEGAE LR+ D+KSL+ V +I+KKSN KL +LH ELQEL
Sbjct: 3 KLEELKEQIRREIRKELKIKEGAENLRKATTDKKSLAHVESILKKSNRKLEDLHQELQEL 62
Query: 110 ESQI 113
E+ I
Sbjct: 63 EAHI 66
|
PKN, also called Protein-kinase C-related kinase (PRK), is a serine/threonine protein kinase that can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytoskeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. In some vertebrates, there are three PKN isoforms from different genes (designated PKN1, PKN2, and PKN3), which show different enzymatic properties, tissue distribution, and varied functions. PKN proteins contain three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the first HR1 domain of PKN. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family. Length = 66 |
| >gnl|CDD|128981 smart00742, Hr1, Rho effector or protein kinase C-related kinase homology region 1 homologues | Back alignment and domain information |
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| >gnl|CDD|216921 pfam02185, HR1, Hr1 repeat | Back alignment and domain information |
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| >gnl|CDD|212008 cd00089, HR1, Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases | Back alignment and domain information |
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| >gnl|CDD|212023 cd11633, HR1_Rhophilin-1, Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Rhophilin-1 | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| PF02185 | 70 | HR1: Hr1 repeat; InterPro: IPR000861 The HR1 repea | 99.51 | |
| cd00089 | 72 | HR1 Protein kinase C-related kinase homology regio | 99.43 | |
| smart00742 | 57 | Hr1 Rho effector or protein kinase C-related kinas | 99.39 | |
| PF15456 | 124 | Uds1: Up-regulated During Septation | 94.81 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 92.01 | |
| KOG2220|consensus | 714 | 85.24 |
| >PF02185 HR1: Hr1 repeat; InterPro: IPR000861 The HR1 repeat was first described as a three times repeated homology region of the N-terminal non-catalytic part of protein kinase PRK1(PKN) [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5e-14 Score=95.47 Aligned_cols=66 Identities=36% Similarity=0.549 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHH-Hhhhhc-HHHHHHHHHHHhHHHHHHHHHHHHhcccccccCCC
Q psy1651 54 LKEHIRKEIRKELKIKEGAEKLREV-ARDRKS-LSDVATIVKKSNSKLSELHNELQELESQIIMTQGQ 119 (141)
Q Consensus 54 ~ra~Ir~eI~KELKIKeGAENL~rA-ttdkk~-r~~Ve~eLs~sN~kL~~L~~eL~eLna~i~v~q~~ 119 (141)
+.+.|+.+|.+|+|||+|||||++| .+|++. +..|+.+|..|+++|+.|+.+|+.++++....++.
T Consensus 2 ~i~~L~~~i~~E~ki~~Gae~m~~~~~t~~~~~~~~~~~~l~~s~~kI~~L~~~L~~l~~~~~~~~~~ 69 (70)
T PF02185_consen 2 RIEELQKKIDKELKIKEGAENMLQAYSTDKKKVLSEAESQLRESNQKIELLREQLEKLQQRSQNSQSS 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHH---HC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCC
Confidence 5688999999999999999999999 578776 99999999999999999999999999988776653
|
The first two of these repeats were later shown to bind the small G protein rho [, ] known to activate PKN in its GTP-bound form. Similar rho-binding domains also occur in a number of other protein kinases and in the rho-binding proteins rhophilin and rhotekin. Recently, the structure of the N-terminal HR1 repeat complexed with RhoA has been determined by X-ray crystallography []. It forms an antiparallel coiled-coil fold termed an ACC finger. This entry includes domains found within rho-associated protein kinases.; GO: 0007165 signal transduction, 0005622 intracellular; PDB: 1CXZ_B 3O0Z_C 2RMK_B 1URF_A. |
| >cd00089 HR1 Protein kinase C-related kinase homology region 1 domain; also known as the ACC (antiparallel coiled-coil) finger domain or Rho-binding domain | Back alignment and domain information |
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| >smart00742 Hr1 Rho effector or protein kinase C-related kinase homology region 1 homologues | Back alignment and domain information |
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| >PF15456 Uds1: Up-regulated During Septation | Back alignment and domain information |
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| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG2220|consensus | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 141 | |||
| 1cxz_B | 86 | Protein (PKN); protein-protein complex, antiparall | 9e-23 | |
| 2ke4_A | 98 | CDC42-interacting protein 4; CIP4, TC10, coiled-co | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1 Length = 86 | Back alignment and structure |
|---|
Score = 84.7 bits (209), Expect = 9e-23
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 29 YELSHKYGFITENVAEEALPNKLEELKEHIRKEIRKELKIKEGAEKLREVARDR-KSLSD 87
+ L + G ++A + +LE +E +R+EIRKELK+KEGAE LR D +SL
Sbjct: 1 WSLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGP 60
Query: 88 VATIVKKSNSKLSELHNELQELESQI 113
V +++ S+ +L LH +LQEL + +
Sbjct: 61 VELLLRGSSRRLDLLHQQLQELHAHV 86
|
| >2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens} Length = 98 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| 1cxz_B | 86 | Protein (PKN); protein-protein complex, antiparall | 99.96 | |
| 1urf_A | 81 | Protein kinase C-like 1; transferase, G-protein, H | 98.37 | |
| 2ke4_A | 98 | CDC42-interacting protein 4; CIP4, TC10, coiled-co | 97.16 | |
| 3ol1_A | 119 | Vimentin; structural genomics, PSI-2, protein stru | 80.53 |
| >1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=184.76 Aligned_cols=83 Identities=40% Similarity=0.639 Sum_probs=79.2
Q ss_pred hhhhcCCcccCcccchhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhh-hhcHHHHHHHHHHHhHHHHHHHHHHHHh
Q psy1651 31 LSHKYGFITENVAEEALPNKLEELKEHIRKEIRKELKIKEGAEKLREVARD-RKSLSDVATIVKKSNSKLSELHNELQEL 109 (141)
Q Consensus 31 L~~~~~~~~~d~~~~~~q~kLe~~ra~Ir~eI~KELKIKeGAENL~rAttd-kk~r~~Ve~eLs~sN~kL~~L~~eL~eL 109 (141)
++..+|+++.|..+|.+|++++++|+.||++|+||||||+|||||++|||| |+++++|+.+|++||++|++||++|++|
T Consensus 3 ~~~~~~~~~~~~~d~~~q~~le~~r~~ir~eI~KElKiKeGaENL~katt~~kk~~~~V~~eL~~sn~kl~~L~~eL~eL 82 (86)
T 1cxz_B 3 LLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQEL 82 (86)
T ss_dssp HHHHTTCTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccCccccccChHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788887888999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccc
Q psy1651 110 ESQI 113 (141)
Q Consensus 110 na~i 113 (141)
+|+|
T Consensus 83 ~a~~ 86 (86)
T 1cxz_B 83 HAHV 86 (86)
T ss_dssp HTTC
T ss_pred cCCC
Confidence 9986
|
| >1urf_A Protein kinase C-like 1; transferase, G-protein, HR1 domain, helical, coiled coil, ATP-binding, serine/threonine-protein kinase, phosphorylation; NMR {Homo sapiens} SCOP: a.2.6.1 PDB: 2rmk_B* | Back alignment and structure |
|---|
| >2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 141 | ||||
| d1cxzb_ | 86 | a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Hu | 6e-26 | |
| d1urfa_ | 81 | a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Hu | 1e-11 |
| >d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 86 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: HR1 repeat family: HR1 repeat domain: Protein kinase c-like 1, pkn/prk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.8 bits (228), Expect = 6e-26
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 29 YELSHKYGFITENVAEEALPNKLEELKEHIRKEIRKELKIKEGAEKLREVARDR-KSLSD 87
+ L + G ++A + +LE +E +R+EIRKELK+KEGAE LR D +SL
Sbjct: 1 WSLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGP 60
Query: 88 VATIVKKSNSKLSELHNELQELESQI 113
V +++ S+ +L LH +LQEL + +
Sbjct: 61 VELLLRGSSRRLDLLHQQLQELHAHV 86
|
| >d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 81 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| d1cxzb_ | 86 | Protein kinase c-like 1, pkn/prk1 {Human (Homo sap | 100.0 | |
| d1urfa_ | 81 | Protein kinase c-like 1, pkn/prk1 {Human (Homo sap | 99.49 |
| >d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Long alpha-hairpin superfamily: HR1 repeat family: HR1 repeat domain: Protein kinase c-like 1, pkn/prk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-34 Score=206.24 Aligned_cols=85 Identities=39% Similarity=0.641 Sum_probs=83.1
Q ss_pred hhhhhhcCCcccCcccchhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhh-hhcHHHHHHHHHHHhHHHHHHHHHHH
Q psy1651 29 YELSHKYGFITENVAEEALPNKLEELKEHIRKEIRKELKIKEGAEKLREVARD-RKSLSDVATIVKKSNSKLSELHNELQ 107 (141)
Q Consensus 29 ~~L~~~~~~~~~d~~~~~~q~kLe~~ra~Ir~eI~KELKIKeGAENL~rAttd-kk~r~~Ve~eLs~sN~kL~~L~~eL~ 107 (141)
|+|+++||+.|+|++++++|++||++|+.||++|+||||||+|||||++|||| ||++++|+.+|++||++|++||+||+
T Consensus 1 ~~~~~~~gl~~~d~~~~~~q~~le~~r~~lr~eI~KELKIKeGAENL~~attd~kk~~~~V~~eL~~sN~kL~~L~~eL~ 80 (86)
T d1cxzb_ 1 WSLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQ 80 (86)
T ss_dssp CCHHHHTTCTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred Hhcccc
Q psy1651 108 ELESQI 113 (141)
Q Consensus 108 eLna~i 113 (141)
+|||+|
T Consensus 81 eLna~i 86 (86)
T d1cxzb_ 81 ELHAHV 86 (86)
T ss_dssp HHHTTC
T ss_pred HhhccC
Confidence 999986
|
| >d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|