Psyllid ID: psy16523

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Secondary Structure (PSIPRED)
cccccccccEEEEEEEEcccHHHHHcccccccEEEEEccEEEEEEEcEEEEEEEcccEEEEEEEEEcccEEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEEcccHHHHHcccccccEEEEccHHHHHHHHHHHHHHEEEcEcccccccEccccEEEEEEEEEEEEEccc
Coil and Loop (DISEMBL)
mwrkppvhpvIRIFIYNvtnadeflsvpgtkpvldeigPYVYVLLTSFVANVIQVNKLernsmtwsglGFYCCLFNMELRWSLTH
Flexible Loop (DISEMBL)
mwrkppvhpvIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Low Complexity Region (SEG)
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Disordered region (IsUnstruct)
******VHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWS***
Disordered Region (DISOPRED)
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWS***
Disordered Region (DISEMBL)
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Disordered Region (DISPRO)
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELRWSLTH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
P27615	478	Lysosome membrane protein	yes	N/A	0.458	0.081	0.463	0.0005
O35114	478	Lysosome membrane protein	yes	N/A	0.458	0.081	0.463	0.0005

>sp|P27615|SCRB2_RAT Lysosome membrane protein 2 OS=Rattus norvegicus GN=Scarb2 PE=1 SV=2

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 2  WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
          W KPP+   I+ + +NVTN +E L   G  P+L+E+GPY Y
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91

Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.
Rattus norvegicus (taxid: 10116)

>sp|O35114|SCRB2_MOUSE Lysosome membrane protein 2 OS=Mus musculus GN=Scarb2 PE=1 SV=3

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)

Query: 2  WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
          W KPP+   I+ + +NVTN +E L   G  P+L+E+GPY Y
Sbjct: 53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91

Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
270037307	520	epithelial membrane protein [Aedes albop	0.482	0.078	0.809	1e-11
157123394	520	epithelial membrane protein [Aedes aegyp	0.482	0.078	0.809	1e-11
328702264	574	PREDICTED: scavenger receptor class B me	0.505	0.074	0.645	2e-11
58385970	522	AGAP004846-PC [Anopheles gambiae str. PE	0.482	0.078	0.761	3e-11
158293053	512	AGAP004846-PA [Anopheles gambiae str. PE	0.482	0.080	0.761	3e-11
170069706	185	epithelial membrane protein [Culex quinq	0.482	0.221	0.761	3e-11
91085263	515	PREDICTED: similar to epithelial membran	0.482	0.079	0.714	3e-09
357606371	454	epithelial membrane protein [Danaus plex	0.470	0.088	0.682	3e-09
380014359	519	PREDICTED: scavenger receptor class B me	0.482	0.078	0.666	1e-08
340723035	519	PREDICTED: scavenger receptor class B me	0.482	0.078	0.642	3e-08

>gi|270037307|gb|ACZ58351.1| epithelial membrane protein [Aedes albopictus]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           W KPPV P+IRIF+YNVTNADEFL+  GTKPVLDE+GPYVYV
Sbjct: 65  WSKPPVEPIIRIFVYNVTNADEFLN-NGTKPVLDELGPYVYV 105

Source: Aedes albopictus

Species: Aedes albopictus

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123394|ref|XP_001660151.1| epithelial membrane protein [Aedes aegypti] gi|108884544|gb|EAT48769.1| AAEL000256-PA [Aedes aegypti]

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           W KPPV P+IRIF+YNVTNADEFL+  GTKPVLDE+GPYVYV
Sbjct: 65  WSKPPVEPIIRIFVYNVTNADEFLN-NGTKPVLDELGPYVYV 105

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328702264|ref|XP_001946482.2| PREDICTED: scavenger receptor class B member 1-like [Acyrthosiphon pisum]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/48 (64%), Positives = 41/48 (85%), Gaps = 5/48 (10%)

Query: 1   MWRKPPVHPVIRIFIYNVTNADEFLSV--PG---TKPVLDEIGPYVYV 43
           MWRKPPV P++++++YNVTNADEFL+V  PG    KP+LDE+GP+VYV
Sbjct: 64  MWRKPPVRPLLKVYVYNVTNADEFLNVVAPGEVREKPILDELGPFVYV 111

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58385970|ref|XP_314345.2| AGAP004846-PC [Anopheles gambiae str. PEST] gi|158293055|ref|XP_314346.4| AGAP004846-PB [Anopheles gambiae str. PEST] gi|55240292|gb|EAA09703.2| AGAP004846-PC [Anopheles gambiae str. PEST] gi|157016922|gb|EAA44477.4| AGAP004846-PB [Anopheles gambiae str. PEST]

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           W +PPV P+IRIF+YNVTNADEFL+  GTKP+LDE+GPYVYV
Sbjct: 65  WSRPPVEPIIRIFVYNVTNADEFLN-NGTKPILDELGPYVYV 105

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293053|ref|XP_001688562.1| AGAP004846-PA [Anopheles gambiae str. PEST] gi|157016921|gb|EDO64039.1| AGAP004846-PA [Anopheles gambiae str. PEST]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2  WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
          W +PPV P+IRIF+YNVTNADEFL+  GTKP+LDE+GPYVYV
Sbjct: 55 WSRPPVEPIIRIFVYNVTNADEFLN-NGTKPILDELGPYVYV 95

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170069706|ref|XP_001869320.1| epithelial membrane protein [Culex quinquefasciatus] gi|167865605|gb|EDS28988.1| epithelial membrane protein [Culex quinquefasciatus]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/42 (76%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           W KPPV P+IRIF+YNVTNADEFL+  GTKP+LDE+GPYVY+
Sbjct: 65  WSKPPVEPMIRIFVYNVTNADEFLN-NGTKPILDELGPYVYI 105

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91085263|ref|XP_966331.1| PREDICTED: similar to epithelial membrane protein isoform 1 [Tribolium castaneum] gi|270009222|gb|EFA05670.1| hypothetical protein TcasGA2_TC014954 [Tribolium castaneum]

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           W KPPV P+I+++IYNVTNADEFL+  G+KPV+DE+GPYVYV
Sbjct: 64  WAKPPVVPMIKVYIYNVTNADEFLN-NGSKPVVDELGPYVYV 104

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357606371|gb|EHJ65041.1| epithelial membrane protein [Danaus plexippus]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 36/41 (87%), Gaps = 1/41 (2%)

Query: 2  WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
          W +PPV P IR+++YNVTNADEFL+  G+KP+LDE+GPYVY
Sbjct: 6  WARPPVRPFIRVYVYNVTNADEFLNN-GSKPILDELGPYVY 45

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014359|ref|XP_003691202.1| PREDICTED: scavenger receptor class B member 1-like [Apis florea]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           WRKPPV P + ++IYNVTNADEFL+  G KP L E+GPYVY+
Sbjct: 64  WRKPPVTPRLNVYIYNVTNADEFLN-DGEKPALVELGPYVYL 104

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723035|ref|XP_003399904.1| PREDICTED: scavenger receptor class B member 1-like [Bombus terrestris]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 1/42 (2%)

Query: 2   WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
           WR+PPV P + ++IYNVTNADEFL+  G KP L E+GPYVY+
Sbjct: 64  WREPPVSPRLSVYIYNVTNADEFLN-DGEKPALVELGPYVYM 104

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
FB|FBgn0010435	601	emp "epithelial membrane prote	0.470	0.066	0.658	6.8e-10
FB|FBgn0027562	552	CG10345 [Drosophila melanogast	0.741	0.114	0.363	1.5e-05
FB|FBgn0035290	615	CG1887 [Drosophila melanogaste	0.458	0.063	0.512	1.8e-05
RGD|621882	478	Scarb2 "scavenger receptor cla	0.564	0.100	0.450	2.1e-05
MGI|MGI:1196458	478	Scarb2 "scavenger receptor cla	0.458	0.081	0.463	2.6e-05
UNIPROTKB|F1RYT3	478	SCARB2 "Uncharacterized protei	0.458	0.081	0.463	3.4e-05
UNIPROTKB|D6RDG0	106	SCARB2 "Lysosome membrane prot	0.458	0.367	0.414	3.9e-05
FB|FBgn0260004	551	Snmp1 "Sensory neuron membrane	0.470	0.072	0.404	4.6e-05
FB|FBgn0025697	563	santa-maria "scavenger recepto	0.482	0.072	0.380	5.4e-05
UNIPROTKB|A6QQP4	478	SCARB2 "SCARB2 protein" [Bos t	0.458	0.081	0.439	7.1e-05

FB|FBgn0010435 emp "epithelial membrane protein" [Drosophila melanogaster (taxid:7227)]

 Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 27/41 (65%), Positives = 34/41 (82%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W KPPV P I ++IYNVTNAD+FLS  G+K ++DE+GPYVY
Sbjct:   146 WAKPPVEPRISLYIYNVTNADDFLS-NGSKAIVDEVGPYVY 185

GO:0005887 "integral to plasma membrane" evidence=ISS;NAS

GO:0005044 "scavenger receptor activity" evidence=ISS;NAS

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0006952 "defense response" evidence=NAS

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0007155 "cell adhesion" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

FB|FBgn0027562 CG10345 [Drosophila melanogaster (taxid:7227)]

 Score = 111 (44.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query:     1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLER 60
             +W  PP+   I ++++N TN DEF S   +K  L E+GPYVY  + S   + +  N+   
Sbjct:    56 LWLLPPLDVYINVYMFNYTNVDEFTSGRASKLQLQEVGPYVYKEVLS--NHNVTYNE-SN 112

Query:    61 NSMTWS 66
             N++T+S
Sbjct:   113 NTITYS 118

GO:0005044 "scavenger receptor activity" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0006952 "defense response" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

FB|FBgn0035290 CG1887 [Drosophila melanogaster (taxid:7227)]

 Score = 111 (44.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 21/41 (51%), Positives = 29/41 (70%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W++P V  + +++IYNVTN D FL   G KP L E+GP+VY
Sbjct:   122 WQRPGVIRLTKLYIYNVTNPDGFLR--GEKPHLQEVGPFVY 160

GO:0005044 "scavenger receptor activity" evidence=NAS

GO:0006952 "defense response" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

RGD|621882 Scarb2 "scavenger receptor class B, member 2" [Rattus norvegicus (taxid:10116)]

 Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANV 52
             W KPP+   I+ + +NVTN +E L   G  P+L+E+GPY Y  L +  ANV
Sbjct:    53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTYRELRN-KANV 100

GO:0004872 "receptor activity" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=ISO;TAS

GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA;ISO

GO:0043202 "lysosomal lumen" evidence=IEA;ISO

MGI|MGI:1196458 Scarb2 "scavenger receptor class B, member 2" [Mus musculus (taxid:10090)]

 Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W KPP+   I+ + +NVTN +E L   G  P+L+E+GPY Y
Sbjct:    53 WEKPPLPVYIQFYFFNVTNPEEILQ--GEIPLLEEVGPYTY 91

GO:0004872 "receptor activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IDA

GO:0006622 "protein targeting to lysosome" evidence=ISO;IMP

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019899 "enzyme binding" evidence=ISO;IPI

GO:0043202 "lysosomal lumen" evidence=IDA

UNIPROTKB|F1RYT3 SCARB2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W+KPP+   I+ + +NVTN +E LS  G  P ++E+GPY Y
Sbjct:    53 WKKPPLPVYIQFYFFNVTNPEEILS--GEIPRVEEVGPYTY 91

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0006622 "protein targeting to lysosome" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004872 "receptor activity" evidence=IEA

UNIPROTKB|D6RDG0 SCARB2 "Lysosome membrane protein 2" [Homo sapiens (taxid:9606)]

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 17/41 (41%), Positives = 25/41 (60%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W KPP+    + + +NVTN +E L   G  P ++E+GPY Y
Sbjct:    53 WEKPPLPVYTQFYFFNVTNPEEILR--GETPRVEEVGPYTY 91

GO:0004872 "receptor activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0260004 Snmp1 "Sensory neuron membrane protein 1" [Drosophila melanogaster (taxid:7227)]

 Score = 87 (35.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query:     1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             +W   P      I+++NVTN DE     G KP L E+GP+V+
Sbjct:    50 LWSNTPFPLHFYIYVFNVTNPDEVSE--GAKPRLQEVGPFVF 89

GO:0005044 "scavenger receptor activity" evidence=ISS;NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0006952 "defense response" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0019236 "response to pheromone" evidence=IMP

GO:0030425 "dendrite" evidence=IDA

GO:0007166 "cell surface receptor signaling pathway" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

FB|FBgn0025697 santa-maria "scavenger receptor acting in neural tissue and majority of rhodopsin is absent" [Drosophila melanogaster (taxid:7227)]

 Score = 106 (42.4 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 16/42 (38%), Positives = 31/42 (73%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYV 43
             W+ PP+   + I++YN TN ++F ++  TKP+L+++GPY ++
Sbjct:    61 WKSPPIDLSLDIYLYNWTNPEDFGNL-STKPILEQVGPYRFI 101

GO:0006952 "defense response" evidence=ISS;NAS

GO:0005044 "scavenger receptor activity" evidence=ISS;NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0048102 "autophagic cell death" evidence=IEP

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016116 "carotenoid metabolic process" evidence=IMP

GO:0007602 "phototransduction" evidence=IMP

GO:0016063 "rhodopsin biosynthetic process" evidence=IMP

GO:0043052 "thermotaxis" evidence=IMP

UNIPROTKB|A6QQP4 SCARB2 "SCARB2 protein" [Bos taurus (taxid:9913)]

 Score = 104 (41.7 bits), Expect = 7.1e-05, P = 7.1e-05
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query:     2 WRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
             W+KPP+    + + +NVTN +E L+  G  P L+E+GPY Y
Sbjct:    53 WKKPPLPVYTQFYFFNVTNPEEILN--GETPRLEEVGPYTY 91

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0006622 "protein targeting to lysosome" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0004872 "receptor activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	85
pfam01130	460	pfam01130, CD36, CD36 family	2e-13

>gnl|CDD|216316 pfam01130, CD36, CD36 family

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)

Query: 1  MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVY 42
           W  PPV    +++++NVTN +E L+  G KP+++E+GPYVY
Sbjct: 43 SWENPPVPLYFKVYLFNVTNPEEVLN-GGAKPIVEEVGPYVY 83

The CD36 family is thought to be a novel class of scavenger receptors. There is also evidence suggesting a possible role in signal transduction. CD36 is involved in cell adhesion. Length = 460

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
PF01130	467	CD36: CD36 family; InterPro: IPR002159 CD36 is a t	99.93
KOG3776|consensus	507		99.86

>PF01130 CD36: CD36 family; InterPro: IPR002159 CD36 is a transmembrane, highly glycosylated, 88kDa glycoprotein expressed by monocytes, macrophages, platelets, microvascular endothelial cells and adipose tissues

Probab=99.93  E-value=1.4e-25  Score=176.44  Aligned_cols=76  Identities=33%  Similarity=0.628  Sum_probs=71.7

Q ss_pred             CccCCCCcceEEEEEEeccChhhhhcCCCCCceeEEeCCeEEEeEEEeeeeEEecCCCcCceEEEEcceEEEEEeeceee
Q psy16523          1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSGLGFYCCLFNMELR   80 (85)
Q Consensus         1 ~W~~pp~~~~~~~y~FNvTN~eevl~g~g~kP~v~EvGPY~Y~e~~~k~ni~~~~n~~e~~t~~y~~~~~y~~~~~~~~~   80 (85)
                      .|++||+|++++||+||||||+||++| |+||+|+|+|||+|+|.++|+|++|++|+   +||+|++++.|.  |+.|.|
T Consensus        43 ~W~~~p~p~~~~~y~fNvTNp~ev~~~-g~kP~~~EvGPY~y~e~~~k~nv~~~~~~---~tvsY~~~~~~~--F~~~~S  116 (467)
T PF01130_consen   43 NWKKPPVPIYFKFYFFNVTNPEEVLNG-GAKPNVQEVGPYVYREYREKVNVTFNDNG---STVSYRQKRTFF--FDPELS  116 (467)
T ss_pred             hhhcCCCccEEEEEEEeccCHHHHhCc-CCCceEEEeCCEEEEeeeeeeeeEEcCCC---cEEEEEeeeeEE--eccccC
Confidence            599999999999999999999999996 99999999999999999999999998873   799999999996  999988


Q ss_pred             ec
Q psy16523         81 WS   82 (85)
Q Consensus        81 ~~   82 (85)
                      -.
T Consensus       117 ~~  118 (467)
T PF01130_consen  117 CG  118 (467)
T ss_pred             CC
Confidence            65

Platelet glycoprotein IV (GP IV)(GPIIIb) (CD36 antigen) is also called GPIV, OKM5-antigen or PASIV. CD36 recognises oxidized low density lipoprotein, long chain fatty acids, anionic phospholipids, collagen types I, IV and V, thrombospondin (TSP) and Plasmodium falciparum infected erythrocytes. The recognition of apoptotic neutrophils is in co-operation with TSP and avb3. Other ligands may still be unknown. CD36 is a scavenger receptor for oxidized LDL and shed photoreceptor outer segments and in recognition and phagocytosis of apoptotic cells and is the cell adhesion molecule in platelet adhesion and aggregation, platelet-monocyte and platelet-tumor cell interaction []. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0007155 cell adhesion, 0016020 membrane

>KOG3776|consensus

Probab=99.86  E-value=9.7e-22  Score=158.68  Aligned_cols=75  Identities=37%  Similarity=0.622  Sum_probs=67.0

Q ss_pred             CccCCCCcceEEEEEEeccChhhhhcCCCCCceeEEeCCeEEEeEEEeeeeEEecCCCcCceEEEEc-ceEEEEEeecee
Q psy16523          1 MWRKPPVHPVIRIFIYNVTNADEFLSVPGTKPVLDEIGPYVYVLLTSFVANVIQVNKLERNSMTWSG-LGFYCCLFNMEL   79 (85)
Q Consensus         1 ~W~~pp~~~~~~~y~FNvTN~eevl~g~g~kP~v~EvGPY~Y~e~~~k~ni~~~~n~~e~~t~~y~~-~~~y~~~~~~~~   79 (85)
                      .|.+||++.+++||+|||||||||++| |+||+|+|+|||+|+|.+.|+|+.+.+    |+|++|.+ ++.|.  ||.|.
T Consensus        54 ~W~~pp~~~~~~~yiFNvTNpde~~~~-~~kp~v~EvGPyvy~E~~~K~~~~f~~----n~tv~f~~~~k~~~--F~p~~  126 (507)
T KOG3776|consen   54 SWLNPPYPIYLNFYIFNVTNPDEFLSG-GAKPNVQEVGPYVYREIEQKVNIDFNE----NNTVSFYQNRKTYV--FNPEE  126 (507)
T ss_pred             hhhcCCCccEEEEEEEecCCHHHhhCc-CCCCceEeeCCeEEEEEecccceeecc----CCcEEEEeeccEEE--echhh
Confidence            599999999999999999999999996 999999999999999999999995555    47777777 99996  99987


Q ss_pred             eec
Q psy16523         80 RWS   82 (85)
Q Consensus        80 ~~~   82 (85)
                      |-.
T Consensus       127 S~~  129 (507)
T KOG3776|consen  127 SVG  129 (507)
T ss_pred             cCC
Confidence            743

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00