Psyllid ID: psy16562
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 445 | 2.2.26 [Sep-21-2011] | |||||||
| Q02079 | 572 | Laccase-3 OS=Thanatephoru | N/A | N/A | 0.611 | 0.475 | 0.389 | 8e-48 | |
| Q02081 | 531 | Laccase-4 OS=Thanatephoru | N/A | N/A | 0.595 | 0.499 | 0.375 | 8e-47 | |
| P56193 | 576 | Laccase-1 OS=Thanatephoru | N/A | N/A | 0.611 | 0.472 | 0.371 | 7e-46 | |
| Q99055 | 520 | Laccase-4 OS=Trametes vil | N/A | N/A | 0.734 | 0.628 | 0.322 | 2e-43 | |
| Q12719 | 520 | Laccase-4 OS=Trametes ver | N/A | N/A | 0.725 | 0.621 | 0.323 | 4e-43 | |
| Q12541 | 520 | Laccase-1 OS=Agaricus bis | N/A | N/A | 0.593 | 0.507 | 0.370 | 5e-43 | |
| Q12718 | 519 | Laccase-2 OS=Trametes ver | N/A | N/A | 0.582 | 0.499 | 0.360 | 3e-42 | |
| Q99046 | 519 | Laccase-2 OS=Trametes vil | N/A | N/A | 0.582 | 0.499 | 0.360 | 5e-42 | |
| Q12542 | 520 | Laccase-2 OS=Agaricus bis | N/A | N/A | 0.582 | 0.498 | 0.359 | 2e-41 | |
| Q02075 | 599 | Laccase-2 OS=Thanatephoru | N/A | N/A | 0.604 | 0.449 | 0.343 | 5e-41 |
| >sp|Q02079|LAC3_THACU Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 191 bits (486), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 160/285 (56%), Gaps = 13/285 (4%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
G + DG ER +N PGP I KGDT+ V V+N + + R ++HWHG+ Q
Sbjct: 31 GKIAPDGVERDATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPDMYRTTSIHWHGLLQHR 90
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
DG VTQCPI ++ Y P +GT++YHSH+ Q +DGL G ++I PK
Sbjct: 91 NADDDGPAFVTQCPIVPQASYTYTMPLGDQTGTYWYHSHLSSQYVDGLRGPLVIYDPK-- 148
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPH LYD D V+I+ DW H T SK T N T +PD+ ING+ + DN+P
Sbjct: 149 DPHRRLYDIDDEKTVLIIGDWYH--TSSKAILATGNITLQQPDSATINGKGRFDPDNTPA 206
Query: 264 VP--MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF 321
P ++ KV+R KRY +R+I S +A +I+ H++ VIA+DG + +P VDS +
Sbjct: 207 NPNTLYTLKVKRGKRYRLRVINSSAIAS-FRMSIQGHKMTVIAADGVSTKPYQVDSFDIL 265
Query: 322 PGDRVDVIIHTNQSNNLYWMQAK-TLCDSITAEAVLQYEGEKLTY 365
G R+D ++ NQ + YW+ A T + TA+A+L YE ++ Y
Sbjct: 266 AGQRIDAVVEANQEPDTYWINAPLTNVANKTAQALLIYEDDRRPY 310
|
Lignin degradation and detoxification of lignin-derived products. Thanatephorus cucumeris (taxid: 107832) EC: 1EC: .EC: 1EC: 0EC: .EC: 3EC: .EC: 2 |
| >sp|Q02081|LAC4_THACU Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 152/288 (52%), Gaps = 23/288 (7%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTP 146
V DGF+R I+S+N +PG I KGDT+ ++V N + D R T+HWHG++Q T
Sbjct: 34 VAPDGFQRPIVSVNGLVPGTLITANKGDTLRINVTNQLTDPSMRRATTIHWHGLFQATTA 93
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADP 205
DG VTQCPI + ++ Y+ P +GT +YH+H+ Q +DGL G ++I P DP
Sbjct: 94 DEDGPAFVTQCPIAQNLSYTYEIPLHGQTGTMWYHAHLASQYVDGLRGPLVIYDPN--DP 151
Query: 206 HAELYDFDLYSHVIIVTDWMHS----MTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNS 261
H YD D S V+++ DW H+ + F N PD+ LING+ +
Sbjct: 152 HKSRYDVDDASTVVMLEDWYHTPAPVLEKQMFSTNNTALLSPVPDSGLINGKGR--YVGG 209
Query: 262 PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF 321
P VP V+R KRY +R+I S + F+IE H+L VI +DG +PL VDS ++
Sbjct: 210 PAVPRSVINVKRGKRYRLRVINASAIGS-FTFSIEGHRLTVIEADGIPHQPLPVDSFQIY 268
Query: 322 PGDRVDVIIHTNQSNNLYWMQAKTLC---------DSITAEAVLQYEG 360
G R VI+ NQ+ YW++A D AVL YEG
Sbjct: 269 AGQRYSVIVEANQTAANYWIRAPMTVAGAGTNANLDPTNVFAVLHYEG 316
|
Lignin degradation and detoxification of lignin-derived products. Thanatephorus cucumeris (taxid: 107832) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|P56193|LAC1_THACU Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 13/285 (4%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
G + DG +R +N PGP I KGDT+ V V+N + + R ++HWHG+ Q
Sbjct: 31 GEIAPDGVKRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHR 90
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
DG VTQCPI ++ Y P +GT++YHSH+ Q +DGL G ++I PK
Sbjct: 91 NADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWYHSHLSSQYVDGLRGPLVIYDPK-- 148
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPH LYD D V+I+ DW H + + N TR +P + ING+ + DN+P
Sbjct: 149 DPHRRLYDVDDEKTVLIIGDWYHESSKAILASG--NITRQRPVSATINGKGRFDPDNTPA 206
Query: 264 VP--MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF 321
P ++ KV+R KRY +R+I S +A F++E H++ VIA+DG + +P VD+ +
Sbjct: 207 NPDTLYTLKVKRGKRYRLRVINSSEIAS-FRFSVEGHKVTVIAADGVSTKPYQVDAFDIL 265
Query: 322 PGDRVDVIIHTNQSNNLYWMQAK-TLCDSITAEAVLQYEGEKLTY 365
G R+D ++ NQ + YW+ A T + TA+A+L YE ++ Y
Sbjct: 266 AGQRIDCVVEANQEPDTYWINAPLTNVPNKTAQALLVYEEDRRPY 310
|
Lignin degradation and detoxification of lignin-derived products. Thanatephorus cucumeris (taxid: 107832) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q99055|LAC4_TRAVI Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 176/363 (48%), Gaps = 36/363 (9%)
Query: 87 RKGCVTADGFERAILSINRQLPGPSIQVCKGDT----IIVDVKNHMIDREVTLHWHGVYQ 142
G V+ DGF RA + N PGP I KGD +I ++ N + + ++HWHG +Q
Sbjct: 33 SNGDVSPDGFTRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQ 92
Query: 143 KVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
K T W DG V QCPI + +F Y F A +GTF+YHSH+ Q DGL G M++ P
Sbjct: 93 KGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDP- 151
Query: 202 TADPHAELYDFDLYSHVIIVTDWMHSMTD--SKFPGNTYNDTRIKPDAILINGQNQNPKD 259
+DPHA+LYD D + +I ++DW H+ + FP I D+ LING +
Sbjct: 152 -SDPHADLYDVDDETTIITLSDWYHTAASLGAAFP--------IGSDSTLINGLGRFAGG 202
Query: 260 NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 319
+S + + V++ KRY MR++ SC +F+I+ H + +I +D EPL VDS+
Sbjct: 203 DSTDLAV--ITVEQGKRYRMRLLSLSC-DPNYVFSIDGHNMTIIEADAVNHEPLTVDSIQ 259
Query: 320 LFPGDRVDVIIHTNQSNNLYWMQA-----KTLCDSITAEAVLQYEGEKLTYVSKRPKSDS 374
++ G R ++ +Q + Y+++A T D A+L+Y G P +
Sbjct: 260 IYAGQRYSFVLTADQDIDNYFIRALPSAGTTSFDGGINSAILRYSGAS----EVDPTTTE 315
Query: 375 FPRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 434
P D + VP+ D IGG A L F + + +D + V
Sbjct: 316 TTSVLPLDEANLVPLDSPAAPGDPN-----IGGVDYALNLDFNFDGTNFFI--NDVSFVS 368
Query: 435 PLV 437
P V
Sbjct: 369 PTV 371
|
Lignin degradation and detoxification of lignin-derived products. Trametes villosa (taxid: 47662) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q12719|LAC4_TRAVE Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 175/359 (48%), Gaps = 36/359 (10%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDT----IIVDVKNHMIDREVTLHWHGVYQKVTP 146
V+ DGF RA + N PGP I KGD +I ++ N + + ++HWHG +QK T
Sbjct: 37 VSPDGFTRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTN 96
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADP 205
W DG V QCPI + +F Y F A +GTF+YHSH+ Q DGL G M++ P +DP
Sbjct: 97 WADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDP--SDP 154
Query: 206 HAELYDFDLYSHVIIVTDWMHSMTD--SKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
HA+LYD D + +I ++DW H+ + FP I D+ LING + +S
Sbjct: 155 HADLYDVDDETTIITLSDWYHTAASLGAAFP--------IGSDSTLINGLGRFAGGDSTD 206
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ + V++ KRY MR++ SC +F+I+ H + +I +D EPL VDS+ ++ G
Sbjct: 207 LAV--ITVEQGKRYRMRLLSLSC-DPNYVFSIDGHNMTIIEADAVNHEPLTVDSIQIYAG 263
Query: 324 DRVDVIIHTNQSNNLYWMQA-----KTLCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRG 378
R ++ +Q + Y+++A T D A+L+Y G P +
Sbjct: 264 QRYSFVLTADQDIDNYFIRALPSAGTTSFDGGINSAILRYSGAS----EVDPTTTETTSV 319
Query: 379 KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLV 437
P D + VP+ D IGG A L F + + +D + V P V
Sbjct: 320 LPLDEANLVPLDSPAAPGDPN-----IGGVDYALNLDFNFDGTNFFI--NDVSFVSPTV 371
|
Lignin degradation and detoxification of lignin-derived products. Trametes versicolor (taxid: 5325) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q12541|LAC1_AGABI Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 156/289 (53%), Gaps = 25/289 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHM----IDREVTLHWHGVYQKVTP 146
+ DGFER + IN + PG IQV KGD++ + + N + + R V++HWHG +Q T
Sbjct: 33 LAPDGFERDTVVINGEFPGTLIQVNKGDSVRIPLHNKLTSPTMRRSVSIHWHGFFQARTS 92
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADP 205
DG V QCP P +TTF Y+F A SGTF+YHSH+ Q DGL G+ I+ P+ DP
Sbjct: 93 GQDGPSFVNQCPQPPNTTFTYEFSVAEQSGTFWYHSHLSTQYCDGLRGAFIVYDPR--DP 150
Query: 206 HAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKP--DAILINGQNQNPKDNSPR 263
LYD D S VI + +W H + N + + I P D+ LING+ + + P
Sbjct: 151 LRHLYDVDDESTVITLAEWYHILAPDA--TNEFFSSGIIPVQDSGLINGKGR--FNGGPL 206
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
P V+R KRY +R+I SC F+++ H L + +DG +P+ V +V ++
Sbjct: 207 TPFAVVNVRRGKRYRLRVIAISCRPF-FTFSVDNHSLVFMEADGVEHDPVEVQNVDIYAA 265
Query: 324 DRVDVIIHTNQSNNLYWMQA----------KTLCDSITAEAVLQYEGEK 362
RV VI+H NQ + YW++A L S+T A+L+Y G +
Sbjct: 266 QRVSVILHANQPIDNYWIRAPMTGGNPDRNPNLNISLTL-AILRYHGAR 313
|
Lignin degradation and detoxification of lignin-derived products. Agaricus bisporus (taxid: 5341) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q12718|LAC2_TRAVE Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 149/286 (52%), Gaps = 27/286 (9%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDV----KNHMIDREVTLHWHGVYQKVTP 146
V+ DGF R + +N +P P I KGD ++V NH + + ++HWHG +Q T
Sbjct: 35 VSPDGFLRDAIVVNGVVPSPLITGKKGDRFQLNVDDTLTNHSMLKSTSIHWHGFFQAGTN 94
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAMP--SGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
W DG V QCPI S +F Y F +P +GTF+YHSH+ Q DGL G ++ PK D
Sbjct: 95 WADGPAFVNQCPIASGHSFLYDF-HVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK--D 151
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMT--DSKFPGNTYNDTRIKPDAILINGQNQNPKDNSP 262
PHA YD D S VI +TDW H+ +FP + DA LING + ++P
Sbjct: 152 PHASRYDVDNESTVITLTDWYHTAARLGPRFP--------LGADATLINGLGR--SASTP 201
Query: 263 RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322
+ VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+ +F
Sbjct: 202 TAALAVINVQHGKRYRFRLVSISCDPN-YTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA 260
Query: 323 GDRVDVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEGEKL 363
R +++ NQ+ YW++A ++ A+L+Y+G +
Sbjct: 261 AQRYSFVLNANQTVGNYWVRANPNFGTVGFAGGINSAILRYQGAPV 306
|
Lignin degradation and detoxification of lignin-derived products. Trametes versicolor (taxid: 5325) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q99046|LAC2_TRAVI Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 149/286 (52%), Gaps = 27/286 (9%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDV----KNHMIDREVTLHWHGVYQKVTP 146
V+ DGF R + +N +P P I KGD ++V NH + + ++HWHG +Q T
Sbjct: 35 VSPDGFLRDAIVVNGVVPSPLITGKKGDRFQLNVVDTLTNHSMLKSTSIHWHGFFQAGTN 94
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAMP--SGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
W +G V QCPI S +F Y F +P +GTF+YHSH+ Q DGL G ++ PK D
Sbjct: 95 WAEGPAFVNQCPIASGHSFLYDF-HVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK--D 151
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMT--DSKFPGNTYNDTRIKPDAILINGQNQNPKDNSP 262
PHA YD D S VI +TDW H+ KFP + DA LING + ++P
Sbjct: 152 PHASRYDVDNESTVITLTDWYHTAARLGPKFP--------LGADATLINGLGR--SASTP 201
Query: 263 RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322
+ VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+ +F
Sbjct: 202 TAALAVINVQHGKRYRFRLVSISCDPN-YTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA 260
Query: 323 GDRVDVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEGEKL 363
R +++ NQ+ YW++A ++ A+L+Y+G +
Sbjct: 261 AQRYSFVLNANQTVGNYWVRANPNFGTVGFAGGINSAILRYQGAPV 306
|
Lignin degradation and detoxification of lignin-derived products. Trametes villosa (taxid: 47662) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q12542|LAC2_AGABI Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 153/284 (53%), Gaps = 25/284 (8%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHM----IDREVTLHWHGVYQKVTPWMD 149
DGFER + IN + PG +QV KGD++ + V N + + R V++HWHG +Q T D
Sbjct: 36 DGFERDTVVINGEFPGTLVQVNKGDSVRIPVNNKLTSSTMRRSVSIHWHGFFQARTSGQD 95
Query: 150 GVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAE 208
G V QCP P +TTF Y+F A SGTF+YHSH+ Q DGL G+ ++ P+ DP
Sbjct: 96 GPAFVNQCPQPPNTTFTYEFSVADESGTFWYHSHLSTQYCDGLRGAFVVYDPE--DPLGH 153
Query: 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKP--DAILINGQNQNPKDNSPRVPM 266
LYD D + VI + +W H + N + + I P D+ LING+ + + P P
Sbjct: 154 LYDVDDETTVITLAEWYHVLAPDI--NNEFFSSGIIPVQDSGLINGKGR--FNGGPETPF 209
Query: 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRV 326
V++ KRY R+I SC F+++ H L + +D +P+ + +V ++ RV
Sbjct: 210 AVVNVEQGKRYRFRVIAISCRPF-FTFSVDNHNLTFMEADSVEHDPVEIQNVDIYAAQRV 268
Query: 327 DVIIHTNQSNNLYWMQA----------KTLCDSITAEAVLQYEG 360
VI++ NQ + YWM+A L S+T A+L+Y+G
Sbjct: 269 SVILNANQPVDNYWMRAPMTGGNPDRNPNLNISLTL-AILRYKG 311
|
Lignin degradation and detoxification of lignin-derived products. Agaricus bisporus (taxid: 5341) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q02075|LAC2_THACU Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 153/285 (53%), Gaps = 16/285 (5%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
G V DG R + +N + PGP I KGDT+ + V+N + D R T+HWHG+ Q
Sbjct: 31 GAVAPDGVTRNAVLVNGRFPGPLITANKGDTLKITVRNKLSDPTMRRSTTIHWHGLLQHR 90
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
T DG VTQCPIP ++ Y P +GT++YHSH+ Q +DGL G ++I P
Sbjct: 91 TAEEDGPAFVTQCPIPPQESYTYTMPLGEQTGTYWYHSHLSSQYVDGLRGPIVIYDPH-- 148
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQ-NPK---- 258
DP+ YD D V + DW H+ +++ T++ + PD+ ING+ + +P
Sbjct: 149 DPYRNYYDVDDERTVFTLADWYHTPSEAIIA--THDVLKTIPDSGTINGKGKYDPASANT 206
Query: 259 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 318
+N+ ++ KV+R KRY +RII S +A F ++ H+ +I +DG +P+ VD+
Sbjct: 207 NNTTLENLYTLKVKRGKRYRLRIINASAIAS-FRFGVQGHKCTIIEADGVLTKPIEVDAF 265
Query: 319 TLFPGDRVDVIIHTNQSNNLYWMQAK-TLCDSITAEAVLQYEGEK 362
+ G R I+ +Q + YW+ A T + +A+L YE +K
Sbjct: 266 DILAGQRYSCILKADQDPDSYWINAPITNVLNTNVQALLVYEDDK 310
|
Lignin degradation and detoxification of lignin-derived products. Thanatephorus cucumeris (taxid: 107832) EC: 1 EC: . EC: 1 EC: 0 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 445 | ||||||
| 261086629 | 619 | laccase 17 [Reticulitermes flavipes] | 0.797 | 0.573 | 0.436 | 2e-84 | |
| 261086617 | 647 | laccase 6 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.436 | 2e-84 | |
| 261086627 | 647 | laccase 15 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.436 | 3e-84 | |
| 261086619 | 647 | laccase 7 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.436 | 8e-84 | |
| 261086625 | 647 | laccase 14 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.436 | 8e-84 | |
| 261086621 | 647 | laccase 12 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.433 | 1e-83 | |
| 261086631 | 647 | laccase 19 [Reticulitermes flavipes] | 0.797 | 0.548 | 0.433 | 2e-83 | |
| 321470899 | 725 | hypothetical protein DAPPUDRAFT_317026 [ | 0.710 | 0.435 | 0.440 | 2e-80 | |
| 380029116 | 728 | PREDICTED: laccase-4-like [Apis florea] | 0.779 | 0.476 | 0.421 | 4e-80 | |
| 110761651 | 746 | PREDICTED: laccase-4 [Apis mellifera] | 0.779 | 0.465 | 0.418 | 4e-80 |
| >gi|261086629|gb|ACX54564.1| laccase 17 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 222/369 (60%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 -PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLVTCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086617|gb|ACX54558.1| laccase 6 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 222/369 (60%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 -PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLATCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086627|gb|ACX54563.1| laccase 15 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 222/369 (60%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 -PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLVTCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086619|gb|ACX54559.1| laccase 7 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 221/369 (59%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDI 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 P-KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLATCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086625|gb|ACX54562.1| laccase 14 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 161/369 (43%), Positives = 221/369 (59%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 -PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIAIDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLVTCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086621|gb|ACX54560.1| laccase 12 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 221/369 (59%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L YLQPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYLQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I T RY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTLRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 P-KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLVTCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|261086631|gb|ACX54565.1| laccase 19 [Reticulitermes flavipes] | Back alignment and taxonomy information |
|---|
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/369 (43%), Positives = 221/369 (59%), Gaps = 14/369 (3%)
Query: 18 LMKYLQPNDVASGRYDNMSTAEAEKNNLCARPCDNAK-PLVCYYSFTLENYATVGPACAD 76
L Y QPND D + K+N CAR C+ + P +CYY +T+ENY T+ AC +
Sbjct: 21 LNSYPQPND----DIDRNTYLLNAKSNNCARICNGTEAPKICYYQWTIENYVTLSEACDN 76
Query: 77 CLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136
C N AC C+TADG+ER+ILS+NR+LPGPSI+VC D +IVD+ N+M R ++H
Sbjct: 77 C-PLNVTACYNAQCITADGYERSILSVNRKLPGPSIEVCLRDRVIVDITNNMAGRTTSIH 135
Query: 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMI 196
WHGV+QK + +MDGVPMVTQC I TFRY F A GT F+HSH GLQK+DG+ G+++
Sbjct: 136 WHGVFQKGSQYMDGVPMVTQCTIHEGDTFRYDFIANNEGTHFWHSHDGLQKLDGVTGNLV 195
Query: 197 IRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQN 256
+R PK DP+ +LYDFDL H I ++DW+H D FPG + ++ LING+ +
Sbjct: 196 VRVPKNFDPNGQLYDFDLPEHKIFISDWLHLSADDHFPGLRATNPGQDANSFLINGRGRT 255
Query: 257 P-KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
S P VQ +RY +RI+G C CP TI+ H++ VIA+DG +V P V
Sbjct: 256 LIGTQSTNTPYAQINVQWGRRYRLRIVGSLCTVCPTQLTIDGHKITVIATDGNSVAPARV 315
Query: 316 DSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAE----AVLQYEG---EKLTYVSK 368
DS+ ++ G+R DV++ + YW+ K L + + VLQYE KL ++
Sbjct: 316 DSLIIYSGERYDVVLEATNTEGSYWIHLKGLATCVGSRVYQLGVLQYENTTTNKLHALTP 375
Query: 369 RPKSDSFPR 377
P D FP+
Sbjct: 376 DPGYDGFPQ 384
|
Source: Reticulitermes flavipes Species: Reticulitermes flavipes Genus: Reticulitermes Family: Rhinotermitidae Order: Isoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321470899|gb|EFX81873.1| hypothetical protein DAPPUDRAFT_317026 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 213/327 (65%), Gaps = 11/327 (3%)
Query: 44 NLCARPCDNAKP-LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILS 102
N C R C P + C Y+F +E Y T+ AC DC N C R C+ ADG +R+++
Sbjct: 24 NPCQRECVEGDPAMRCSYTFQIEYYYTMSKACYDC-PINPADCYRTYCIAADGVQRSVVV 82
Query: 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSS 162
INRQ+PGPSIQVC+GDTIIVDV NH++ ++HWHG++Q TP+MDGVP++TQCPI +
Sbjct: 83 INRQMPGPSIQVCQGDTIIVDVINHLMSETCSIHWHGMHQIGTPYMDGVPLITQCPISPA 142
Query: 163 TTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVT 222
++FRY F A SGT FYHSH G Q++DG+ GS+I+R + +DPH+ LYD+DL HV++V+
Sbjct: 143 SSFRYNFIAQNSGTHFYHSHSGFQRVDGVVGSLIVRQSRQSDPHSSLYDYDLPEHVLLVS 202
Query: 223 DWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNS-----PRVPMHFFKVQRDKRY 277
DW+ + +KF + ++D KP +++ING+ + PK S +P+ F V++ +RY
Sbjct: 203 DWLGELGVAKFVAHHHDDGDNKPTSMIINGRGRLPKSRSELTSNETIPLSVFNVEQGRRY 262
Query: 278 LMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNN 337
R+I L CP+ +I+ H L VIASDG ++P+ VDSV + G+R D +++ +Q +
Sbjct: 263 RFRLISNGFLNCPIQLSIDNHTLLVIASDGNDIQPIEVDSVVIHAGERYDFVVNADQEIS 322
Query: 338 LYWMQAKTLCDSITAE----AVLQYEG 360
YW++ L D E A+L+Y G
Sbjct: 323 SYWIRLHGLMDCRVKEVFQGAILRYGG 349
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380029116|ref|XP_003698228.1| PREDICTED: laccase-4-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 215/363 (59%), Gaps = 16/363 (4%)
Query: 32 YDNMSTAEAEKN------NLCARPC-DNAKPLVCYYSFTLENYATVGPACADCLKGNQKA 84
Y STAE +N + CAR C +N P +CYY FTLE Y +G AC C
Sbjct: 95 YSERSTAELRRNPALSSPDECARACRENEPPRICYYHFTLEYYTVLGAACQICTPNATNV 154
Query: 85 CRRK-GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQK 143
CV ADG ER IL+ NR +PGPSIQVC+GD +++DV+NH+ EVT+HWHGV+Q+
Sbjct: 155 VWSDCQCVLADGVERGILTANRMIPGPSIQVCQGDKVVIDVENHIEGMEVTIHWHGVWQR 214
Query: 144 VTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
+ + DGVP VTQCPI +TFRY++ A GT F+H+H GLQKMDGL GS++IR P +
Sbjct: 215 GSQYYDGVPFVTQCPIQEGSTFRYQWTAGNEGTHFWHAHTGLQKMDGLYGSIVIRQPPSK 274
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNS-- 261
DP++ LYD+DL +HV++++DW H +FPG +T P+++LING+ Q N+
Sbjct: 275 DPNSNLYDYDLTTHVVLISDWFHENAAERFPGRLAVNTGQAPESVLINGKGQFRDPNTGF 334
Query: 262 -PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTL 320
P+ F + +RY R+I CP T E H L VIA+DG AV+P+ VD++
Sbjct: 335 MTNTPLEVFTITPGRRYRFRLINSFGSVCPSQITFEGHSLTVIATDGEAVQPVTVDTIIS 394
Query: 321 FPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAEA----VLQYEGEKLTYVSKRPKSD-SF 375
F G+R D +I+ +Q YW+Q ++L + A +L+Y + P D
Sbjct: 395 FSGERYDFVINADQPVGAYWIQVRSLGECGIPRAQQLGILRYARGPYQPTTTAPTYDFGL 454
Query: 376 PRG 378
P+G
Sbjct: 455 PQG 457
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|110761651|ref|XP_393845.3| PREDICTED: laccase-4 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 16/363 (4%)
Query: 32 YDNMSTAEAEKN------NLCARPC-DNAKPLVCYYSFTLENYATVGPACADCLKGNQKA 84
Y STAE +N + CAR C +N P +CYY FTLE Y +G AC C
Sbjct: 113 YSERSTAELRRNPALSSPDECARACRENEPPRICYYHFTLEYYTVLGAACQICTPNATNV 172
Query: 85 CRRK-GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQK 143
CV ADG ER IL+ NR +PGPSIQVC+GD +++DV+NH+ EVT+HWHGV+Q+
Sbjct: 173 VWSDCQCVLADGVERGILTANRMIPGPSIQVCQGDKVVIDVENHIEGMEVTIHWHGVWQR 232
Query: 144 VTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
+ + DGVP VTQCPI +TFRY++ A GT F+H+H GLQKMDGL GS++IR P +
Sbjct: 233 GSQYYDGVPFVTQCPIQEGSTFRYQWTAGNEGTHFWHAHTGLQKMDGLYGSIVIRQPPSK 292
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNS-- 261
DP++ LYD+DL +HV++++DW H +FPG +T P+++LING+ Q N+
Sbjct: 293 DPNSNLYDYDLTTHVVLISDWFHENAAERFPGRLAVNTGQAPESVLINGKGQFRDPNTGF 352
Query: 262 -PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTL 320
P+ F + +RY R+I CP T E H L +IA+DG AV+P+ VD++
Sbjct: 353 MTNTPLEVFTITPGRRYRFRLINSFGSVCPSQITFEGHSLTIIATDGEAVQPVTVDTIIS 412
Query: 321 FPGDRVDVIIHTNQSNNLYWMQAKTLCDSITAEA----VLQYEGEKLTYVSKRPKSD-SF 375
F G+R D +I+ +Q YW+Q ++L + A +L+Y + P D
Sbjct: 413 FSGERYDFVINADQPVGAYWIQVRSLGECGIPRAQQLGILRYARGPYQPTTTAPTYDFGL 472
Query: 376 PRG 378
P+G
Sbjct: 473 PQG 475
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 445 | ||||||
| FB|FBgn0032116 | 959 | Mco1 "Multicopper oxidase-1" [ | 0.519 | 0.240 | 0.497 | 3.6e-75 | |
| FB|FBgn0259247 | 784 | laccase2 "laccase 2" [Drosophi | 0.8 | 0.454 | 0.398 | 2.2e-73 | |
| FB|FBgn0052557 | 645 | CG32557 [Drosophila melanogast | 0.671 | 0.463 | 0.369 | 2.9e-55 | |
| FB|FBgn0039387 | 677 | MCO3 "multicopper oxidase 3" [ | 0.698 | 0.459 | 0.342 | 2.1e-54 | |
| UNIPROTKB|D0VWU3 | 499 | D0VWU3 "Laccase" [Trametes max | 0.570 | 0.509 | 0.340 | 3.7e-39 | |
| ASPGD|ASPL0000035520 | 570 | lccB [Emericella nidulans (tax | 0.582 | 0.454 | 0.346 | 2.6e-38 | |
| TAIR|locus:2135242 | 582 | AT4G39830 [Arabidopsis thalian | 0.649 | 0.496 | 0.318 | 9.5e-36 | |
| TAIR|locus:2178973 | 573 | AT5G21100 [Arabidopsis thalian | 0.530 | 0.411 | 0.338 | 1.8e-35 | |
| UNIPROTKB|G4NBF8 | 747 | MGG_17429 "Uncharacterized pro | 0.579 | 0.345 | 0.338 | 7.1e-33 | |
| TAIR|locus:505006625 | 588 | AT5G21105 [Arabidopsis thalian | 0.534 | 0.404 | 0.329 | 2e-32 |
| FB|FBgn0032116 Mco1 "Multicopper oxidase-1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 619 (223.0 bits), Expect = 3.6e-75, Sum P(2) = 3.6e-75
Identities = 117/235 (49%), Positives = 156/235 (66%)
Query: 22 LQPNDVASGRYDNMSTAEAEKNNLCARPCD-NAKPLVCYYSFTLENYATVGPACADCLKG 80
LQ N VA D++ TAE +N+ C R C A+P+ C Y F +E Y T AC DC +
Sbjct: 223 LQDN-VAEST-DDIWTAEWYRNHPCNRDCQVGAEPMTCRYKFVVEWYQTFSKACYDCPR- 279
Query: 81 NQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGV 140
N C R CV DG ER+I +NR +PGP+I+VC+GD I+VDVKNH++ ++HWHG+
Sbjct: 280 NLTDCSRPHCVMGDGLERSITVVNRMMPGPAIEVCEGDEIVVDVKNHLLGESTSIHWHGL 339
Query: 141 YQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTP 200
+QK TP+MDGVP +TQCPI TFRY FPA SGT F+HSH G+Q+ DG+ ++IIR P
Sbjct: 340 HQKKTPYMDGVPHITQCPITPHATFRYSFPADLSGTHFWHSHTGMQRGDGVFSALIIRKP 399
Query: 201 KTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQ 255
KTA+PH LYDFDL HV+IV DW+H S F + ++ KP +L+NG+ +
Sbjct: 400 KTAEPHGGLYDFDLSEHVMIVQDWIHDTGASIFSYHHHSRGDNKPHNLLVNGKGR 454
|
|
| FB|FBgn0259247 laccase2 "laccase 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 150/376 (39%), Positives = 219/376 (58%)
Query: 22 LQPNDVASGRYDNMST---AEAEKN------NLCARPC-DNAKPLVCYYSFTLENYATVG 71
++PN + R+ + ST AE +N + CAR C + P +CYY FTLE Y +G
Sbjct: 147 VEPNPKSPFRHLDFSTSATAELRRNPALSAPDECARACREGEPPRICYYHFTLEYYTVLG 206
Query: 72 PACADCL-KGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID 130
AC C CV ADG ER IL+ NR +PGPSIQVC+ D +++DV+NHM
Sbjct: 207 AACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPSIQVCENDKVVIDVENHMEG 266
Query: 131 REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDG 190
EVT+HWHG++Q+ + + DGVP VTQCPI TFRY++ +GT F+H+H GLQK+DG
Sbjct: 267 MEVTIHWHGIWQRGSQYYDGVPFVTQCPIQQGNTFRYQWTGN-AGTHFWHAHTGLQKLDG 325
Query: 191 LEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILI 250
L GS+++R P + DP++ LYDFDL +H+++++DW+H ++PG +T P+++LI
Sbjct: 326 LYGSVVVRQPPSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLI 385
Query: 251 NGQNQNPKDNS---PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDG 307
NG+ Q N+ P+ F + +RY R+I CP TIE H + VIA+DG
Sbjct: 386 NGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEGHGMTVIATDG 445
Query: 308 TAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAE--AVLQYEGEKL 363
V P+ V+++ F G+R D +I +Q YW+Q + L C A+ A+L+Y
Sbjct: 446 EPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLGECGIRRAQQLAILRYARGPY 505
Query: 364 TYVSKRPKSD-SFPRG 378
S P D P+G
Sbjct: 506 QPASSPPTYDVGIPQG 521
|
|
| FB|FBgn0052557 CG32557 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 125/338 (36%), Positives = 182/338 (53%)
Query: 46 CARPCDNAKPLVCYYSFTLENYATVGPACADCLK--------GNQ---------KACRRK 88
C R C + +P+ CYY + T+ C L+ G + +
Sbjct: 67 CRRDCADKQPMTCYYYMVVHYDDTMAETCKRYLQSKFRFKLSGKEYIDGIALATQLAAND 126
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM 148
C ADG E ++ +N QLPG +I+VC GDT++ DV N M + T+HWHG++Q++TP+M
Sbjct: 127 DCKYADGLESEVMVVNGQLPGMNIEVCYGDTVVADVINSMHET-TTIHWHGMHQRLTPFM 185
Query: 149 DGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAE 208
DGVP VTQ PI + FRY+F GT ++HSH Q+ GL G +++R P +PHA
Sbjct: 186 DGVPHVTQYPIEAGQAFRYRFEVDHGGTNWWHSHTEHQRAFGLAGPLVVRMPPKLNPHAH 245
Query: 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDN----SPRV 264
LYDFD+ HVI++ DW+H+ +S + ILING+ +N K P +
Sbjct: 246 LYDFDMSEHVIMIQDWVHNFVESV------------AENILINGRGRNLKKGVKAAKPTL 293
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
HF V R RY R+I CP+ F+I+KH L VIASDG +EP+ V + +
Sbjct: 294 YAHF-PVVRGGRYRFRVIFNGVSNCPISFSIDKHDLVVIASDGNDIEPVEVQRIMFHGAE 352
Query: 325 RVDVIIHTNQSNNLYWMQAK--TLC--DSITAEAVLQY 358
R D ++H NQ + YW++ K + C + + EAVL Y
Sbjct: 353 RFDFVLHANQEVSNYWIRVKGYSFCAKNQLHQEAVLHY 390
|
|
| FB|FBgn0039387 MCO3 "multicopper oxidase 3" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 115/336 (34%), Positives = 184/336 (54%)
Query: 46 CARPCDNAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINR 105
C R C + CYY + NY +GP C C + +++AC + C+ DG ++++NR
Sbjct: 102 CRRVCQQGQSQNCYYQLVVHNYQRLGPECQRC-QFDERACASEHCIYGDGVANPVMAVNR 160
Query: 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165
+PGPSI++C+ DT++VDV N++ + T+HWHGV+ TP MDG P +TQ P+
Sbjct: 161 MVPGPSIELCENDTVVVDVLNYLSE-PTTMHWHGVHMHRTPEMDGAPFITQYPLQPGEVQ 219
Query: 166 RYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWM 225
R++F SG+ +YHSHVG Q+ G+ G+ ++R + H++LYD+DL H +++ D
Sbjct: 220 RHEFKVDRSGSLWYHSHVGWQRGFGVAGAFVVRQTSQENQHSQLYDYDLVEHTLMIQDIF 279
Query: 226 HSMTDSKFPGNTYNDTRIKPDAILINGQNQNP----KDNSPRVPMHFFKVQRDKRYLMRI 281
+ YN ++ IL+NG+ +N DN R +V RY MR+
Sbjct: 280 YE----------YNLQDVRN--ILVNGKGRNHLSQLPDNDNRHRYERLRVTPGYRYRMRV 327
Query: 282 IGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWM 341
I CP+ F+IE+H+L +I++DG +EP++ D L +R D ++ NQ YW+
Sbjct: 328 ILNGIANCPVEFSIEQHRLLMISTDGNDIEPVLADGFFLTSAERFDFVLEANQYKKNYWI 387
Query: 342 QAKTL--CDS--ITAEAVLQYEGEKLTYVSKRPKSD 373
+ K C++ I AVL Y G S+ P+ D
Sbjct: 388 RIKGYEQCENRNIYQGAVLSYRGSAR---SELPQGD 420
|
|
| UNIPROTKB|D0VWU3 D0VWU3 "Laccase" [Trametes maxima (taxid:259368)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 95/279 (34%), Positives = 143/279 (51%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGD----TIIVDVKNHMIDREVTLHWHGVYQKVTPWMD 149
DGF R + +N PGP + GD +I ++ NH + + ++HWHG +Q+ T W D
Sbjct: 18 DGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWAD 77
Query: 150 GVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAE 208
G + QCPI +F Y F +GTF+YHSH+ Q DGL G ++ P DPHA
Sbjct: 78 GPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHAS 135
Query: 209 LYDFDLYSHVIIVTDWMHSMTD--SKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPM 266
YD D VI + DW H+ +FP DA LING+ + P D S + +
Sbjct: 136 RYDVDNDDTVITLADWYHTAAKLGPRFPAGA--------DATLINGKGRAPSDTSAELSV 187
Query: 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRV 326
KV + KRY R++ SC F+I+ H L +I D + +PL VDS+ +F R
Sbjct: 188 --IKVTKGKRYRFRLVSLSCDP-NFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRY 244
Query: 327 DVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEG 360
+++ NQ+ + YW++A ++ A+L+Y+G
Sbjct: 245 SFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYDG 283
|
|
| ASPGD|ASPL0000035520 lccB [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 98/283 (34%), Positives = 149/283 (52%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
DG+ER +L N LPGP I+ GD +++ V N + +HWHG++Q+ T DGVP
Sbjct: 75 DGYERQVLVFNGTLPGPLIEANWGDELVIHVTNGLEHNGTAIHWHGIWQRGTNQYDGVPG 134
Query: 154 VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213
VTQCPI T+ Y+F A GT +YHSH LQ +GL G ++I P +AD YD D
Sbjct: 135 VTQCPISPGQTYTYRFRATQYGTTWYHSHFSLQLAEGLFGPLVIHGPASAD-----YDVD 189
Query: 214 LYSHVIIVTDWMHSMTDSKFPGNT-YNDTRIKPDAI----LINGQNQNPKDNSPRVPMHF 268
L S + ++DW H + +T Y ++ +A+ L NG N R M
Sbjct: 190 LGS--VFISDWYHKSAFILWEESTRYGGVPVRANAVPPTGLFNGSNVFG-GGGRRSEMI- 245
Query: 269 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDV 328
V++ K+Y +R+I S + F+I+ H+L VI++D +EP D+V L G R DV
Sbjct: 246 --VEKGKKYRLRLIDSSVDGW-MKFSIDGHKLTVISADLVPIEPYETDAVILTSGQRYDV 302
Query: 329 IIHTNQSNNLYWMQA--KTLCDSITAE-----AVLQYEGEKLT 364
+ NQ YW + +T C+ + + +L+Y G +++
Sbjct: 303 VFEANQKIGNYWTRVIYQTACNGLDIKDPDIRGILRYAGAEIS 345
|
|
| TAIR|locus:2135242 AT4G39830 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 9.5e-36, P = 9.5e-36
Identities = 99/311 (31%), Positives = 152/311 (48%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
D FE+ +++IN + PGP+I+ +GDTI+V++KN + V +HWHG+ Q TPW DGV
Sbjct: 50 DCFEKLVITINGKFPGPTIKAQQGDTIVVELKNSFMTENVAVHWHGIRQIGTPWFDGVEG 109
Query: 154 VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213
VTQCPI F Y+F GT+ YHSH G+Q+ GL G MI +P +P YD+D
Sbjct: 110 VTQCPILPGEVFIYQFVVDRPGTYMYHSHYGMQRESGLIG-MIQVSPPATEPEPFTYDYD 168
Query: 214 LYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ-NPKDNSPRVPMHFFK 270
++TDW H K G + +P +++I G+ + N +N P
Sbjct: 169 ---RNFLLTDWYHKSMSEKATGLASIPFKWVGEPQSLMIQGRGRFNCSNNLTTPPSLVSG 225
Query: 271 V----QRD-KRYLMRII-G-------GSCLACP-LIFTIEKHQLQVIASDGTAVEPLVVD 316
V D R+++ +I G GS A L F IE H L V+ +DG VEP V
Sbjct: 226 VCNVSNADCSRFILTVIPGKTYRLRIGSLTALSALSFQIEGHNLTVVEADGHYVEPFTVK 285
Query: 317 SVTLFPGDRVDVIIHTNQS-NNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKSDSF 375
++ ++ G+ V++ +Q+ YW+ + + T + +RP +
Sbjct: 286 NLFVYSGETYSVLLKADQNPRRNYWITSSIVSRPATTPPATAVLNYYPNHPRRRPPTSES 345
Query: 376 PRGKPKDNSPR 386
P+ N R
Sbjct: 346 SNIVPEWNDTR 356
|
|
| TAIR|locus:2178973 AT5G21100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 385 (140.6 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 90/266 (33%), Positives = 138/266 (51%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
E +++IN Q PGP+I GDT+I+ V N + V +HWHG+ QK TPW DG VTQ
Sbjct: 41 EGIVMAINGQFPGPTIDAVAGDTVIIHVVNKLSTEGVVIHWHGIRQKGTPWADGAAGVTQ 100
Query: 157 CPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYS 216
CPI TF YKF +GT FYH H G+Q+ GL G +I+R+PK +YD +
Sbjct: 101 CPINPGETFTYKFIVDKAGTHFYHGHYGMQRSSGLYGMLIVRSPK----ERLIYDGEFN- 155
Query: 217 HVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ---------NP-------- 257
++++DW H ++ + R +P ++LING+ Q N
Sbjct: 156 --LLLSDWWHQSIHAQELALSSRPMRWIGEPQSLLINGRGQFNCSQAAYFNKGGEKDVCT 213
Query: 258 -KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVD 316
K+N P +V+ ++ Y +RI + LA L ++ HQL V+ +DG V P V+
Sbjct: 214 FKENDQCAPQTL-RVEPNRVYRLRIASTTALAS-LNLAVQGHQLVVVEADGNYVAPFTVN 271
Query: 317 SVTLFPGDRVDVIIHTNQ-SNNLYWM 341
+ ++ G+ V++ TN + YW+
Sbjct: 272 DIDVYSGETYSVLLKTNALPSKKYWI 297
|
|
| UNIPROTKB|G4NBF8 MGG_17429 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 96/284 (33%), Positives = 142/284 (50%)
Query: 88 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW 147
+G DG R +L +N + PGP I+ KGDT++V+V N + +HWHG+ QK TP+
Sbjct: 214 RGKAWPDGVVRDVLLVNGKFPGPLIEANKGDTVVVNVTNKLDSEPTAIHWHGIQQKETPY 273
Query: 148 MDGVPMVTQCPIPSSTTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSMIIRTPKTADPH 206
DG V+QC IP + Y F GTF++H+H Q MDG+ G ++I P+
Sbjct: 274 YDGTVGVSQCGIPPGQSLVYNFTLEGQFGTFWWHAHHEGQAMDGVLGPLVIHAPEEKQVR 333
Query: 207 AELYDFDLYSHVIIVTDWMHSMTD---SKF--PGNTYNDTRIKPDAILINGQNQ-NPKD- 259
+ YD D ++I+ DW H + +++ PG ND I PD LING+N N
Sbjct: 334 -QTYDED---RIVILQDWYHDPSQVNLARYLAPG-VENDEPI-PDNGLINGRNYFNCSSY 387
Query: 260 --NSPRV----PMH-FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP 312
S R H + R+ + +R+I A F I+KH L +I +DG P
Sbjct: 388 GTESNRTCHDGTSHAILSLNRNSKTRLRLINAGGFAS-FEFGIDKHLLNIIEADGILTRP 446
Query: 313 LVVDSVTLFPGDRVDVIIHTNQ---SNNLYWMQAKTLCDSITAE 353
V V + G R V++ TNQ SNN YW++++ + E
Sbjct: 447 TSVRRVPIHVGQRYSVVVDTNQGTESNN-YWIRSRMISHCFKGE 489
|
|
| TAIR|locus:505006625 AT5G21105 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 359 (131.4 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 87/264 (32%), Positives = 135/264 (51%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
E A++++N + PGP+I+ GDTI+V++ N + + +HWHG+ Q +PW DG VTQ
Sbjct: 55 EGAVMTVNGEFPGPTIKAFAGDTIVVNLTNKLTTEGLVIHWHGIRQFGSPWADGAAGVTQ 114
Query: 157 CPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYS 216
C I TF Y F GT FYH H G+Q+ GL GS+I+ K YD +
Sbjct: 115 CAINPGETFTYNFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGKSERLR-YDGEFN- 172
Query: 217 HVIIVTDWMHSMTDSKFPGNTYNDTRIKPDA--ILINGQNQ-NPK-----DNSPRVPMHF 268
++++DW H S+ G + R +A ILING+ Q N N+ +PM
Sbjct: 173 --LLLSDWWHEAIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAAQFSNNTSLPMCT 230
Query: 269 FK-----------VQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDS 317
FK V+ +K Y +R+ + LA L ++ H+L V+ +DG + P D
Sbjct: 231 FKEGDQCAPQILHVEPNKTYRIRLSSTTALAS-LNLAVQGHKLVVVEADGNYITPFTTDD 289
Query: 318 VTLFPGDRVDVIIHTNQ--SNNLY 339
+ ++ G+ V++ T+Q S N Y
Sbjct: 290 IDIYSGESYSVLLTTDQDPSQNYY 313
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 445 | |||
| TIGR03388 | 541 | TIGR03388, ascorbase, L-ascorbate oxidase, plant t | 2e-52 | |
| PLN02604 | 566 | PLN02604, PLN02604, oxidoreductase | 2e-46 | |
| pfam07732 | 119 | pfam07732, Cu-oxidase_3, Multicopper oxidase | 9e-43 | |
| PLN02191 | 574 | PLN02191, PLN02191, L-ascorbate oxidase | 9e-42 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 5e-40 | |
| COG2132 | 451 | COG2132, SufI, Putative multicopper oxidases [Seco | 1e-38 | |
| TIGR03390 | 538 | TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fu | 1e-34 | |
| PLN02354 | 552 | PLN02354, PLN02354, copper ion binding / oxidoredu | 2e-28 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 1e-24 | |
| TIGR01480 | 587 | TIGR01480, copper_res_A, copper-resistance protein | 1e-24 | |
| PLN02835 | 539 | PLN02835, PLN02835, oxidoreductase | 1e-23 | |
| PLN02792 | 536 | PLN02792, PLN02792, oxidoreductase | 6e-18 | |
| PLN02168 | 545 | PLN02168, PLN02168, copper ion binding / pectinest | 4e-17 | |
| PLN00044 | 596 | PLN00044, PLN00044, multi-copper oxidase-related p | 3e-16 | |
| PLN02991 | 543 | PLN02991, PLN02991, oxidoreductase | 2e-14 | |
| PRK10965 | 523 | PRK10965, PRK10965, multicopper oxidase; Provision | 2e-10 | |
| pfam00394 | 146 | pfam00394, Cu-oxidase, Multicopper oxidase | 9e-10 | |
| TIGR03389 | 539 | TIGR03389, laccase, laccase, plant | 3e-04 |
| >gnl|CDD|234193 TIGR03388, ascorbase, L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 2e-52
Identities = 99/302 (32%), Positives = 147/302 (48%), Gaps = 32/302 (10%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
D FE+ ++ IN Q PGP+I+ GDTI+V++ N + V +HWHG+ Q TPW DG
Sbjct: 16 DCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIHWHGIRQIGTPWADGTAG 75
Query: 154 VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213
VTQC I TF Y F GT+FYH H G+Q+ GL GS+I+ P + YD +
Sbjct: 76 VTQCAINPGETFIYNFVVDRPGTYFYHGHYGMQRSAGLYGSLIVDVPDG-EKEPFHYDGE 134
Query: 214 LYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ-----NPKDNSPRVPM 266
++++DW H + G + R +P ++LING+ Q K +S +P
Sbjct: 135 ---FNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQ 191
Query: 267 -----------HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVV 315
V+ K Y +RI + LA L F IE H+L V+ +DG VEP V
Sbjct: 192 CNLKGNEQCAPQILHVEPGKTYRLRIASTTALAA-LNFAIEGHKLTVVEADGNYVEPFTV 250
Query: 316 DSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTLC---DSITAEAVLQYEGEKLTYVSKRP 370
+ ++ G+ V++ T+Q S N YW+ ++ VL Y S+ P
Sbjct: 251 KDIDIYSGETYSVLLTTDQDPSRN-YWISVGVRGRKPNTPPGLTVLNYYP---NSPSRLP 306
Query: 371 KS 372
+
Sbjct: 307 PT 308
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. Length = 541 |
| >gnl|CDD|215324 PLN02604, PLN02604, oxidoreductase | Back alignment and domain information |
|---|
Score = 168 bits (426), Expect = 2e-46
Identities = 92/267 (34%), Positives = 145/267 (54%), Gaps = 26/267 (9%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
D F++ +++IN + PGP+I +GDT+IV++KN ++ V +HWHG+ Q TPW DG
Sbjct: 39 DCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENVAIHWHGIRQIGTPWFDGTEG 98
Query: 154 VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKT-ADPHAELYDF 212
VTQCPI TF Y+F GT+ YH+H G+Q+ GL GS+ + P+ ++P + YD+
Sbjct: 99 VTQCPILPGETFTYEFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFS--YDY 156
Query: 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ-------NP------ 257
D II+TDW H T + G + +P ++LI G+ + +P
Sbjct: 157 D---RSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGV 213
Query: 258 -KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVD 316
+P + V K Y +RI + L+ L F IE H + V+ +DG VEP VV
Sbjct: 214 CNATNPECSPYVLTVVPGKTYRLRISSLTALSA-LSFQIEGHNMTVVEADGHYVEPFVVK 272
Query: 317 SVTLFPGDRVDVIIHTNQ--SNNLYWM 341
++ ++ G+ V++ +Q S N YW+
Sbjct: 273 NLFIYSGETYSVLVKADQDPSRN-YWV 298
|
Length = 566 |
| >gnl|CDD|219542 pfam07732, Cu-oxidase_3, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 9e-43
Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
VT G R ++ +N Q PGP+I+V +GDT++V+V N++ D T+HWHG+ Q TPW DG
Sbjct: 7 VTPLGGTRQVIGVNGQFPGPTIRVREGDTVVVNVTNNL-DEPTTIHWHGLRQPGTPWADG 65
Query: 151 VPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKM-DGLEGSMIIRTPK 201
VP VTQCPIP +F Y+F +GT++YHSH + GL G++II P
Sbjct: 66 VPGVTQCPIPPGESFTYRFTVKQQAGTYWYHSHTSWLQQAAGLYGAIIIEDPA 118
|
This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. Length = 119 |
| >gnl|CDD|177843 PLN02191, PLN02191, L-ascorbate oxidase | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 9e-42
Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 43/296 (14%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
D E A++++N Q PGP+I GDTI+V + N + + +HWHG+ QK +PW DG
Sbjct: 38 DCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLVIHWHGIRQKGSPWADGAAG 97
Query: 154 VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAEL-YD- 211
VTQC I TF YKF GT FYH H G+Q+ GL GS+I+ K P L YD
Sbjct: 98 VTQCAINPGETFTYKFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVAKG--PKERLRYDG 155
Query: 212 -FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ------NPKDNSP 262
F+L +++DW H S+ G + R + +ILING+ Q N
Sbjct: 156 EFNL-----LLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGT 210
Query: 263 RVPMHFFK-----------VQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
+PM FK V+ +K Y +R+ + LA L ++ H+L V+ +DG +
Sbjct: 211 ELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALA-SLNLAVQGHKLVVVEADGNYIT 269
Query: 312 PLVVDSVTLFPGDRVDVIIHTNQ-SNNLYWM------------QAKTLCDSITAEA 354
P D + ++ G+ V++ T+Q + Y++ QA T+ + +TA A
Sbjct: 270 PFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQALTILNYVTAPA 325
|
Length = 574 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 5e-40
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 33/280 (11%)
Query: 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQC 157
++IL++N + PGP++ +GDT+IV+V N+ + VT+HWHGV Q W DG +TQC
Sbjct: 22 KSILTVNGKFPGPTLYAREGDTVIVNVTNN-VQYNVTIHWHGVRQLRNGWADGPAYITQC 80
Query: 158 PIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA-----DPHAELYD 211
PI ++ Y F GT ++H+H+ + + G+++I P E+
Sbjct: 81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRAT-VYGAIVILPKPGVPYPFPKPDREV-- 137
Query: 212 FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKP---DAILINGQNQNPKDNSPRVPMHF 268
II+ +W ++ ++ N N T P DA ING P
Sbjct: 138 ------PIILGEWWNADVEAVI--NQANQTGGAPNVSDAYTINGH---PGPLYNCSSKDT 186
Query: 269 FK--VQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRV 326
FK V+ K YL+RII + L L F I H L V+ D T +P ++ + PG
Sbjct: 187 FKLTVEPGKTYLLRIINAA-LNDELFFAIANHTLTVVEVDATYTKPFKTKTIVIGPGQTT 245
Query: 327 DVIIHTNQSNNLYWMQAKTLC------DSITAEAVLQYEG 360
+V++ +QS Y+M A+ D+ T A+LQY+G
Sbjct: 246 NVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKG 285
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
| >gnl|CDD|225043 COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-38
Identities = 78/305 (25%), Positives = 119/305 (39%), Gaps = 29/305 (9%)
Query: 86 RRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT 145
+R A G + N LPGP+I+V KGDT+ +D+ N ++ + ++HWHG+ V
Sbjct: 40 QRAQLAFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLLV-DTSVHWHGL--PVP 96
Query: 146 PWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADP 205
MDGVP +TQ P T Y F GT++YH H Q DGL G++II +
Sbjct: 97 GEMDGVPPLTQIPPGPGETPTYTFTQDVPGTYWYHPHTHGQVYDGLAGALIIEDENSEPL 156
Query: 206 HAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKP-DAILINGQNQNPKDNSPRV 264
D + VI+ DW+ D P D +L+NG
Sbjct: 157 G---VDDE---PVILQDDWLD--EDGTDLYQEGPAMGGFPGDTLLVNGAI---------- 198
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
+ F V +R++ A + L VIA DG + P+ VD + L PG+
Sbjct: 199 -LPFKAVPGGV-VRLRLLNAG-NARTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGE 255
Query: 325 RVDVIIHTNQSNNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKDNS 384
R +V++ N + +Y P + D +
Sbjct: 256 RYEVLVDMNDGGAVTLTALGEDMPDTLKGFRAPNPILTPSY----PVLNGRVGAPTGDMA 311
Query: 385 PRVPM 389
P+
Sbjct: 312 DHAPV 316
|
Length = 451 |
| >gnl|CDD|132431 TIGR03390, ascorbOXfungal, L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 1e-34
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 48/305 (15%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
R + +N PGP I++ +G T + V N + D VT+HWHG+ Q+ P+ DG P+ +Q
Sbjct: 26 SRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQ 85
Query: 157 CPIPSSTTFRYKFPAMP--SGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214
PIP F Y+ P +G++FYHSHVG Q + G +I+ + Y +D
Sbjct: 86 WPIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQAVTA-FGPLIVEDCEPPP-----YKYD- 138
Query: 215 YSHVIIVTDWMHSMTDS-----------KFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
+++V+D+ S TD + G + +A+L+NG++ N +
Sbjct: 139 DERILLVSDFF-SATDEEIEQGLLSTPFTWSG--------ETEAVLLNGKSGNKSFYAQI 189
Query: 264 VP-----MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQ-LQVIASDGTAVEPLVVDS 317
P + V+ K Y +R IG + L+ + IE H+ L +I +DG+ +P +D
Sbjct: 190 NPSGSCMLPVIDVEPGKTYRLRFIGATALSL-ISLGIEDHENLTIIEADGSYTKPAKIDH 248
Query: 318 VTLFPGDRVDVIIHTNQSNNL-------YWMQAKTLC--DSITAEAVLQYE---GEKLTY 365
+ L G R V+ + L Y++Q +T AVL+Y KL
Sbjct: 249 LQLGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSDKASKLPS 308
Query: 366 VSKRP 370
V + P
Sbjct: 309 VPETP 313
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. Length = 538 |
| >gnl|CDD|177987 PLN02354, PLN02354, copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-28
Identities = 85/296 (28%), Positives = 139/296 (46%), Gaps = 31/296 (10%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM 148
G + G + ++ IN Q PGP+I + I+++V N+ +D L W G+ Q+ W
Sbjct: 37 GTASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNN-LDEPFLLTWSGIQQRKNSWQ 95
Query: 149 DGVPMVTQCPIPSSTTFRYKF-PAMPSGTFFYHSHVGLQKMDGLEGSM------IIRTPK 201
DGVP T CPIP T F Y F P G++FY+ G+ + G G + +I P
Sbjct: 96 DGVPG-TNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVP- 153
Query: 202 TADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYND---TRIKPDAILINGQNQNPK 258
ADP + + +++ DW T S + D T +PD +LING++
Sbjct: 154 YADPEDD--------YTVLIGDW---YTKSHTALKKFLDSGRTLGRPDGVLINGKSGKGD 202
Query: 259 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 318
P+ F ++ K Y RI L L F I+ H+++++ +G+ V DS+
Sbjct: 203 GKDE--PL--FTMKPGKTYRYRICNVG-LKSSLNFRIQGHKMKLVEMEGSHVLQNDYDSL 257
Query: 319 TLFPGDRVDVIIHTNQSNNLYWMQAKT--LCDSITAEAVLQYEGEKLTYVSKRPKS 372
+ G V++ NQ+ Y+M A T L +T +++YEG K + P++
Sbjct: 258 DVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGKGPASPELPEA 313
|
Length = 552 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 1e-24
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 216 SHVIIVTDWMHSMTDSKFPGNTYNDTRIK-------PDAILINGQNQNPKDNSPRVPMHF 268
+VI ++DW H D+K + PDA+LING++ +
Sbjct: 2 DYVITLSDWYH--KDAKDLEKELLASGKAPTDFPPVPDAVLINGKD--GASLAT------ 51
Query: 269 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDV 328
V K Y +RII + L F+IE H++ V+ DG V P VDS+ +FPG R V
Sbjct: 52 LTVTPGKTYRLRIINVALDD-SLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFPGQRYSV 110
Query: 329 IIHTNQSNNLYWMQAKTLC---DSITAEAVLQYEG 360
++ NQ YW+ A D+ TA A+L+Y G
Sbjct: 111 LVTANQDPGNYWIVASPNIPAFDNGTAAAILRYSG 145
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|233432 TIGR01480, copper_res_A, copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 1e-24
Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 52/279 (18%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW-MD 149
V G R +++N +PGP ++ +GDT+ + V N + + ++HWHG+ + P+ MD
Sbjct: 57 VNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTN-TLPEDTSIHWHGI---LLPFQMD 112
Query: 150 GVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAEL 209
GVP V+ I TF Y+FP SGT++YHSH G Q+ GL G +II P DP
Sbjct: 113 GVPGVSFAGIAPGETFTYRFPVRQSGTYWYHSHSGFQEQAGLYGPLII-DPAEPDPVR-- 169
Query: 210 YDFDLYSHVIIVTDW--MHSMTD-SKFPGNTYNDTRIKPDA------ILINGQNQNPKD- 259
D + HV++++DW + K +D K + +G Q D
Sbjct: 170 ADRE---HVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADR 226
Query: 260 ---NSPRV-PMHFFKVQRD----------------------KRYLMRIIGGSCLACPLIF 293
R+ P V ++ +R I GS + F
Sbjct: 227 KMWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMT---YF 283
Query: 294 T--IEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330
I +L V+A DG V P+ VD + P + DVI+
Sbjct: 284 DVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIV 322
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 587 |
| >gnl|CDD|178429 PLN02835, PLN02835, oxidoreductase | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 1e-23
Identities = 87/299 (29%), Positives = 134/299 (44%), Gaps = 34/299 (11%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM 148
G ++ G + ++ IN Q PGP + V D II+++ N + D+ L W+G+ Q+ W
Sbjct: 39 GTISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKL-DQPFLLTWNGIKQRKNSWQ 97
Query: 149 DGVPMVTQCPIPSSTTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSM-IIRTPKTADPH 206
DGV + T CPIP ++ + YKF GTF Y K G G++ + P+ P
Sbjct: 98 DGV-LGTNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPF 156
Query: 207 AE-LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIK--PDAILINGQNQNPKDNSPR 263
DF L +V DW T K + ++ PD +LINGQ Q+
Sbjct: 157 PLPDGDFTL-----LVGDWYK--TSHKTLQQRLDSGKVLPFPDGVLINGQTQST------ 203
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
F + K Y+ R I L+ L F I+ H ++++ +G+ + DS+ + G
Sbjct: 204 -----FSGDQGKTYMFR-ISNVGLSTSLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVG 257
Query: 324 DRVDVIIHTNQSNNLYWMQAKT--LCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKP 380
V V++ NQS Y++ A T +TA AVL Y S+ P S P
Sbjct: 258 QSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSN------SRTPASGPLPALPS 310
|
Length = 539 |
| >gnl|CDD|178389 PLN02792, PLN02792, oxidoreductase | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 6e-18
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 24/293 (8%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWM 148
G ++ R + IN Q PGP I+ D ++++V N + D L W+GV+ + +
Sbjct: 26 GNISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDL-DEPFLLSWNGVHMRKNSYQ 84
Query: 149 DGVPMVTQCPIPSSTTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSM-IIRTPKTADPH 206
DGV T CPIP + Y F G++FY + +QK G GS+ I P+ P
Sbjct: 85 DGV-YGTTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPF 143
Query: 207 AE-LYDFDLYSHVIIVTDWM-HSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
E DF ++ DW + T K + + PD ++INGQ +
Sbjct: 144 PEPAGDF-----TFLIGDWYRRNHTTLKKILDGGRKLPLMPDGVMINGQGVS-------- 190
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
++ V + K Y R I L L F I HQL++I +GT + S+ + G
Sbjct: 191 YVYSITVDKGKTYRFR-ISNVGLQTSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQ 249
Query: 325 RVDVIIHTNQSNNLYWMQAKT--LCDSITAEAVLQYEGEKLTYV--SKRPKSD 373
V++ +Q Y + T + + + L Y K + +++P D
Sbjct: 250 TYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSKGHKIIHARQPDPD 302
|
Length = 536 |
| >gnl|CDD|215113 PLN02168, PLN02168, copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 4e-17
Identities = 83/335 (24%), Positives = 140/335 (41%), Gaps = 52/335 (15%)
Query: 95 GFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV 154
G + ++ IN PGP + D I V++ N++ + + W+G+ + W DGV
Sbjct: 42 GGNKQVIVINDMFPGPLLNATANDVINVNIFNNLTE-PFLMTWNGLQLRKNSWQDGV-RG 99
Query: 155 TQCPIPSSTTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSMIIRTPKTA-----DPHAE 208
T CPI T + Y+F G++FY + LQK G G++ I P+ P E
Sbjct: 100 TNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDEE 159
Query: 209 LYDFDLYSHVIIVTDWMHS----MTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
YD I++ DW ++ M S G++ PD IL NG+
Sbjct: 160 -YD-------ILIGDWFYADHTVMRASLDNGHSLP----NPDGILFNGRGPEET------ 201
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
FF + K Y +RI C L F I+ H + ++ ++GT V+ V S+ + G
Sbjct: 202 ---FFAFEPGKTYRLRISNVGLKTC-LNFRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQ 257
Query: 325 RVDVIIHT-NQSNNL---YWMQAKT-LCDS-ITAEAVLQYEGEKLTYVSKRPKSDSFPRG 378
V++ + Y++ A D+ + A+++Y P S P G
Sbjct: 258 SYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRY-----------PNSPLDPVG 306
Query: 379 KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACP 413
P +P + +F V++ M + G+ + P
Sbjct: 307 -PLPLAPALHDYFSSVEQALSIRMDLNVGAARSNP 340
|
Length = 545 |
| >gnl|CDD|165622 PLN00044, PLN00044, multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 3e-16
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
++ + IN Q PGP++ V ++V+V+N + D + L WHGV Q+ + W DGV T
Sbjct: 47 KQEAIGINGQFPGPALNVTTNWNLVVNVRNAL-DEPLLLTWHGVQQRKSAWQDGV-GGTN 104
Query: 157 CPIPSSTTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSMIIRTPKTAD---PHAELYDF 212
C IP+ + Y+F G+FFY L + G G++ I + D
Sbjct: 105 CAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDI 164
Query: 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNS---PRVPMHFF 269
L+ + DW + D PD +LIN ++S P +
Sbjct: 165 TLF-----IADWYARDHRALRRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERI 219
Query: 270 KVQRDKRYLMRI--IGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVD 327
V K Y R+ +G +A L F I+ H L ++ ++G+ ++ + G
Sbjct: 220 NVDPGKTYRFRVHNVG---VATSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYS 276
Query: 328 VIIHTNQSNNL-YWMQAK------TLCDSITAEAVLQYEGEKLTYVSKRPKSDSFP 376
++ +Q+ + Y++ A + D +T A+L Y S+ P S P
Sbjct: 277 FLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYSN------SQGPASGPLP 326
|
Length = 596 |
| >gnl|CDD|215536 PLN02991, PLN02991, oxidoreductase | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 2e-14
Identities = 71/281 (25%), Positives = 111/281 (39%), Gaps = 29/281 (10%)
Query: 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSS 162
IN + PGP I D +I++V NH+ D + W G+ + DGV T CPIP
Sbjct: 52 INGKFPGPDIISVTNDNLIINVFNHL-DEPFLISWSGIRNWRNSYQDGV-YGTTCPIPPG 109
Query: 163 TTFRYKFPAMPS-GTFFYHSHVGLQKMDGLEGSMIIRT-PKTADPHAELYDFDLYSHVII 220
+ Y G+F+Y +G K G G++ I + P P D + ++
Sbjct: 110 KNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFPAPAD----DYTVL 165
Query: 221 VTDWMHSMTDSKFPGNTYNDTRIK-PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLM 279
+ DW + N ++ PD ILING+ N ++ K Y +
Sbjct: 166 IGDW-YKTNHKDLRAQLDNGGKLPLPDGILINGRGSGATLN----------IEPGKTYRL 214
Query: 280 RIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLY 339
R I L L F I+ H ++++ +GT S+ + G V+I +Q Y
Sbjct: 215 R-ISNVGLQNSLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDY 273
Query: 340 WMQAKTLCDS--ITAEAVLQYEGEKLTYVSKRPKSDSFPRG 378
++ + S + VL Y S P S P G
Sbjct: 274 YIVVSSRFTSKILITTGVLHYSN------SAGPVSGPIPDG 308
|
Length = 543 |
| >gnl|CDD|236810 PRK10965, PRK10965, multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSS 162
N L GP++++ +G + VD+ N + E TLHWHG+ +V +DG P Q I
Sbjct: 70 YNGNLLGPAVRLQRGKAVTVDITNQL-PEETTLHWHGL--EVPGEVDGGP---QGIIAPG 123
Query: 163 TTFRYKF-PAMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTA 203
F P+ T ++H H G Q GL G ++I ++
Sbjct: 124 GKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESL 169
|
Length = 523 |
| >gnl|CDD|215896 pfam00394, Cu-oxidase, Multicopper oxidase | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 9e-10
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 392 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445
V K Y +RII + L F+IE H++ V+ DG V P VDS+ +FP
Sbjct: 52 LTVTPGKTYRLRIINVALDD-SLNFSIEGHKMTVVEVDGVYVNPFTVDSLDIFP 104
|
Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. Length = 146 |
| >gnl|CDD|234194 TIGR03389, laccase, laccase, plant | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 372 SDSFP-RGKPKDNSPRVPMHFFK--VQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS 428
SD++ G P FK V+ K YL+RII + L L F I H L V+
Sbjct: 166 SDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAA-LNDELFFAIANHTLTVVEV 224
Query: 429 DGTAVEPLVVDSVTLFP 445
D T +P ++ + P
Sbjct: 225 DATYTKPFKTKTIVIGP 241
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. Length = 539 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 445 | |||
| PLN02835 | 539 | oxidoreductase | 100.0 | |
| PLN02991 | 543 | oxidoreductase | 100.0 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 100.0 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 100.0 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 100.0 | |
| PLN02792 | 536 | oxidoreductase | 100.0 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 100.0 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 100.0 | |
| PLN02191 | 574 | L-ascorbate oxidase | 100.0 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 100.0 | |
| PLN02604 | 566 | oxidoreductase | 100.0 | |
| KOG1263|consensus | 563 | 100.0 | ||
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 100.0 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 100.0 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 100.0 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 100.0 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 100.0 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 100.0 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 99.94 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 99.88 | |
| PLN02168 | 545 | copper ion binding / pectinesterase | 99.88 | |
| PLN02835 | 539 | oxidoreductase | 99.88 | |
| PLN02792 | 536 | oxidoreductase | 99.88 | |
| PLN00044 | 596 | multi-copper oxidase-related protein; Provisional | 99.88 | |
| TIGR03389 | 539 | laccase laccase, plant. Members of this protein fa | 99.87 | |
| PLN02991 | 543 | oxidoreductase | 99.87 | |
| PLN02191 | 574 | L-ascorbate oxidase | 99.87 | |
| TIGR03388 | 541 | ascorbase L-ascorbate oxidase, plant type. Members | 99.86 | |
| PLN02604 | 566 | oxidoreductase | 99.86 | |
| TIGR03390 | 538 | ascorbOXfungal L-ascorbate oxidase, fungal type. T | 99.85 | |
| KOG1263|consensus | 563 | 99.84 | ||
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 99.82 | |
| TIGR01480 | 587 | copper_res_A copper-resistance protein, CopA famil | 99.82 | |
| PRK10965 | 523 | multicopper oxidase; Provisional | 99.77 | |
| PRK10883 | 471 | FtsI repressor; Provisional | 99.74 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 99.71 | |
| COG2132 | 451 | SufI Putative multicopper oxidases [Secondary meta | 99.46 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 99.25 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 99.08 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.83 | |
| PF00394 | 159 | Cu-oxidase: Multicopper oxidase; InterPro: IPR0011 | 98.82 | |
| PF07731 | 138 | Cu-oxidase_2: Multicopper oxidase; InterPro: IPR01 | 98.65 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 98.28 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.24 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 98.07 | |
| PRK02710 | 119 | plastocyanin; Provisional | 97.99 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 97.84 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 97.74 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.71 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.7 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 97.37 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 97.2 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 97.19 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 97.05 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 96.97 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.53 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 96.29 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 95.52 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 95.22 | |
| PRK02710 | 119 | plastocyanin; Provisional | 94.45 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 93.52 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 92.15 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 92.1 | |
| PF00116 | 120 | COX2: Cytochrome C oxidase subunit II, periplasmic | 90.74 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 90.33 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 89.41 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 89.29 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 88.55 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 87.98 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 85.7 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 84.69 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 83.51 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 82.66 |
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-69 Score=568.94 Aligned_cols=266 Identities=29% Similarity=0.510 Sum_probs=230.5
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+.+||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+
T Consensus 27 ~~~~~y~~~v~~~----------------------~~~~dg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~L~-~~tt 83 (539)
T PLN02835 27 DPYKYYTWTVTYG----------------------TISPLGVPQQVILINGQFPGPRLDVVTNDNIILNLINKLD-QPFL 83 (539)
T ss_pred CcEEEEEEEEEEE----------------------EeccCCeEEEEEEECCcCCCCCEEEECCCEEEEEEEeCCC-CCCc
Confidence 4789999999974 3568999999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCcc-cc
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELY-DF 212 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~-d~ 212 (445)
|||||++|++++||||+++ |||||+||++|+|+|++ +++||||||||++.|+++||+|+|||++++.. +. +| .+
T Consensus 84 iHWHGl~~~~~~~~DGv~~-tQ~pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~--p~~~~ 159 (539)
T PLN02835 84 LTWNGIKQRKNSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRI-PI--PFPLP 159 (539)
T ss_pred EEeCCcccCCCCCCCCCcc-CcCCCCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCC-Cc--CCCCC
Confidence 9999999999999999999 99999999999999997 48999999999999999999999999865322 21 12 12
Q ss_pred CCcceEEEEeeeeccCCCCccCCCC-CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNT-YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~-~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
| .|++|+|+||++..... +...+ .......++++||||+.. +.++|++|++|||||||++.. ..+
T Consensus 160 d-~e~~l~l~Dw~~~~~~~-~~~~~~~g~~~~~~d~~liNG~~~-----------~~~~v~~G~~yRlRliNa~~~-~~~ 225 (539)
T PLN02835 160 D-GDFTLLVGDWYKTSHKT-LQQRLDSGKVLPFPDGVLINGQTQ-----------STFSGDQGKTYMFRISNVGLS-TSL 225 (539)
T ss_pred C-ceEEEEeeccccCCHHH-HHHHhhcCCCCCCCceEEEccccC-----------ceEEECCCCEEEEEEEEcCCC-ccE
Confidence 3 37999999999986533 21111 122235789999999965 379999999999999999987 489
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCC
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGE 361 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~ 361 (445)
.|+|+||.|+||++||++++|..++.+.|++||||||+|++++.+|+|||++... +....+.|+|+|.+.
T Consensus 226 ~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~GqRydvlv~~~~~~g~y~i~a~~~~~~~~~~~~ail~Y~~~ 297 (539)
T PLN02835 226 NFRIQGHTMKLVEVEGSHTIQNIYDSLDVHVGQSVAVLVTLNQSPKDYYIVASTRFTRQILTATAVLHYSNS 297 (539)
T ss_pred EEEECCCEEEEEEECCccCCCceeeEEEECcCceEEEEEEcCCCCCcEEEEEEccccCCCcceEEEEEECCC
Confidence 9999999999999999999999999999999999999999999889999998654 455678999999875
|
|
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=559.32 Aligned_cols=268 Identities=22% Similarity=0.442 Sum_probs=232.4
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+++||++|.+++|||++|||+|++++||+|+|+|+|+|+ ++|+
T Consensus 26 ~~~~~~~~~vt~~----------------------~~~pdG~~r~~~~vNG~~PGP~I~~~~GD~v~V~V~N~L~-~~tt 82 (543)
T PLN02991 26 DPYRFFEWHVTYG----------------------NISPLGVAQQGILINGKFPGPDIISVTNDNLIINVFNHLD-EPFL 82 (543)
T ss_pred CceEEEEEEEEEE----------------------EeCCCCEEEEEEEEcCCCCCCcEEEECCCEEEEEecCCCC-CCcc
Confidence 4688999999975 3678999999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCcc-cc
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELY-DF 212 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~-d~ 212 (445)
|||||++|.+++||||+++ |||||+||++|+|+|++. ++||||||||.+.|+.+||+|+|||++++.. +. ++ .+
T Consensus 83 iHWHGi~q~~~~~~DGv~~-tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~--p~~~~ 158 (543)
T PLN02991 83 ISWSGIRNWRNSYQDGVYG-TTCPIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLI-PV--PFPAP 158 (543)
T ss_pred EEECCcccCCCccccCCCC-CCCccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCccc-Cc--ccccc
Confidence 9999999999999999998 999999999999999995 8999999999999999999999999987432 21 12 22
Q ss_pred CCcceEEEEeeeeccCCCCccCCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
| .|++|+|+||++..... +...+. ......++++||||++.+ +.++|++|++|||||||++... .+
T Consensus 159 d-~d~~i~l~DW~~~~~~~-~~~~~~~~~~~~~~d~~liNG~~~~----------~~~~v~~G~~yRlRiINa~~~~-~~ 225 (543)
T PLN02991 159 A-DDYTVLIGDWYKTNHKD-LRAQLDNGGKLPLPDGILINGRGSG----------ATLNIEPGKTYRLRISNVGLQN-SL 225 (543)
T ss_pred c-ceeEEEecceecCCHHH-HHHHhhcCCCCCCCCEEEEccCCCC----------ceEEECCCCEEEEEEEeccCCe-eE
Confidence 2 37999999999986433 221111 112347899999999653 4799999999999999999874 79
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCCC
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGEK 362 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~~ 362 (445)
.|+|++|.|+||++||.+++|..++++.|++||||||+|++++++|+|||++... .....+.|||+|++..
T Consensus 226 ~~~idgH~~tVIa~DG~~~~p~~~~~l~i~~GQRydvlv~a~~~~~~y~i~~~~~~~~~~~~~~AIl~Y~g~~ 298 (543)
T PLN02991 226 NFRIQNHTMKLVEVEGTHTIQTPFSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILITTGVLHYSNSA 298 (543)
T ss_pred EEEECCCEEEEEEeCCccccceeeeEEEEcCCcEEEEEEECCCCCCcEEEEEeeccCCCCcceEEEEEeCCCC
Confidence 9999999999999999999999999999999999999999999999999999864 3445678999998763
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-68 Score=558.69 Aligned_cols=270 Identities=24% Similarity=0.434 Sum_probs=231.7
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+++||+++.+++|||++|||+|++++||+|+|+|+|+|+ ++|+
T Consensus 24 a~~~~~~~~vt~~----------------------~~~pdG~~~~~~~vNG~~PGP~I~~~~GD~v~V~v~N~L~-~~tt 80 (545)
T PLN02168 24 APIVSYQWVVSYS----------------------QRFILGGNKQVIVINDMFPGPLLNATANDVINVNIFNNLT-EPFL 80 (545)
T ss_pred ccEEEEEEEEEEE----------------------EecCCCeEEEEEEECCcCCCCcEEEECCCEEEEEEEeCCC-CCcc
Confidence 4789999999974 3678999999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||||++|.+++||||+|+ |||||+||++|+|+|++. ++||||||||.+.|+.+||+|+|||++++........++.
T Consensus 81 iHWHGl~~~~~~~~DGv~g-tQcpI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~~~d~- 158 (545)
T PLN02168 81 MTWNGLQLRKNSWQDGVRG-TNCPILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFPKPDE- 158 (545)
T ss_pred EeeCCccCCCCCCcCCCCC-CcCCCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcCcccc-
Confidence 9999999999999999999 999999999999999995 8999999999999999999999999987542211112333
Q ss_pred CcceEEEEeeeeccCCCCccCCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 214 LYSHVIIVTDWMHSMTDSKFPGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
|++|+|+||++.+... +..... ......++++||||++.. .++++|++|++|||||||++... .+.
T Consensus 159 --e~~l~l~Dw~~~~~~~-~~~~~~~g~~~~~~d~~liNG~~~~---------~~~~~v~~G~~yRlRiiNa~~~~-~~~ 225 (545)
T PLN02168 159 --EYDILIGDWFYADHTV-MRASLDNGHSLPNPDGILFNGRGPE---------ETFFAFEPGKTYRLRISNVGLKT-CLN 225 (545)
T ss_pred --eeeEEEEecCCCCHHH-HHhhhhcCCCCCCCCEEEEeccCCC---------cceEEeCCCCEEEEEEEeccCCc-eEE
Confidence 6899999999875432 111111 112346899999999643 25899999999999999999874 799
Q ss_pred EEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCC-c---eEEEEEEec--CCCceeeEEEEEcCCC
Q psy16562 293 FTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSN-N---LYWMQAKTL--CDSITAEAVLQYEGEK 362 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~-G---~y~~~~~~~--~~~~~~~ail~y~~~~ 362 (445)
|+|++|.|+||++||.+++|..++++.|++||||||+|++++++ | +|||++... +....+.|||+|.++.
T Consensus 226 ~~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydvlv~a~~~~~g~~~~Y~i~a~~~~~~~~~~~~ail~Y~~~~ 301 (545)
T PLN02168 226 FRIQDHDMLLVETEGTYVQKRVYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIVATARFTDAYLGGVALIRYPNSP 301 (545)
T ss_pred EEECCcEEEEEEECCeECCCceeeEEEEcCCceEEEEEEcCCCCCCCcceEEEEEEecccCCCcceEEEEEECCCC
Confidence 99999999999999999999999999999999999999998654 4 899999875 5667788999998753
|
|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-68 Score=560.97 Aligned_cols=275 Identities=26% Similarity=0.497 Sum_probs=233.8
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++.+|+|+|++. ...+||++|.+++|||++|||+|+|++||+|+|+|+|+|+ ++|+
T Consensus 25 ~~~~~y~~~v~~~----------------------~~~pdG~~r~~~~iNGq~PGP~I~~~~GD~v~V~v~N~l~-~~tt 81 (552)
T PLN02354 25 DPYFFFTWNVTYG----------------------TASPLGVPQQVILINGQFPGPNINSTSNNNIVINVFNNLD-EPFL 81 (552)
T ss_pred ccEEEEEEEEEEE----------------------EecCCCeEEEEEEECCCCcCCcEEEeCCCEEEEEEEECCC-CCcc
Confidence 4688999999974 3568999999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||||++|++++||||+|+ |||||+||++|+|+|++. ++||||||||++.|+.+||+|+|||+++... + .+|+..
T Consensus 82 iHWHGi~q~~~~~~DGv~~-TQcpI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~-~--~p~~~~ 157 (552)
T PLN02354 82 LTWSGIQQRKNSWQDGVPG-TNCPIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLI-P--VPYADP 157 (552)
T ss_pred cccccccCCCCcccCCCcC-CcCCCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCC-C--CCCCCc
Confidence 9999999999999999999 999999999999999985 8999999999999999999999999987422 1 124321
Q ss_pred CcceEEEEeeeeccCCCCccCCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 214 LYSHVIIVTDWMHSMTDSKFPGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
..|++|+|+||+++.... +..... ......++++||||++.... ....+.|+|++|++|||||||++... .+.
T Consensus 158 d~e~~l~l~Dw~~~~~~~-~~~~~~~g~~~~~~d~~liNG~~~~~~----~~~~~~~~v~~Gk~yRlRiINa~~~~-~~~ 231 (552)
T PLN02354 158 EDDYTVLIGDWYTKSHTA-LKKFLDSGRTLGRPDGVLINGKSGKGD----GKDEPLFTMKPGKTYRYRICNVGLKS-SLN 231 (552)
T ss_pred CceEEEEeeeeccCCHHH-HHHHHhcCCCCCCCCeEEEeCCcCCCC----CCCceEEEECCCCEEEEEEEecCCCc-eEE
Confidence 237999999999986433 111111 11123579999999964321 01246899999999999999999884 899
Q ss_pred EEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCCC
Q psy16562 293 FTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGEK 362 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~~ 362 (445)
|+|+||.|+||++||++++|..++.+.|++||||||+|++++++|+|||++... +....+.|||+|.++.
T Consensus 232 f~IdgH~~tVIa~DG~~v~p~~~~~l~i~~GqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~ 303 (552)
T PLN02354 232 FRIQGHKMKLVEMEGSHVLQNDYDSLDVHVGQCFSVLVTANQAPKDYYMVASTRFLKKVLTTTGIIRYEGGK 303 (552)
T ss_pred EEECCceEEEEEeCCcccCCcceeEEEEccCceEEEEEECCCCCCcEEEEEeccccCCCccEEEEEEECCCC
Confidence 999999999999999999999999999999999999999999889999999864 5566788999998763
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-68 Score=557.56 Aligned_cols=279 Identities=25% Similarity=0.477 Sum_probs=232.9
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCC--eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADG--FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG--~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
..+++|+|+|++. .+++|| ..+.+++|||++|||+|++++||+|+|+|+|+|+ ++
T Consensus 25 ~~~~~y~~~v~~~----------------------~~~pdg~~~~~~vi~vNGq~PGPtI~~~~GD~v~V~V~N~L~-~~ 81 (596)
T PLN00044 25 DPYAYYDWEVSYV----------------------SAAPLGGVKKQEAIGINGQFPGPALNVTTNWNLVVNVRNALD-EP 81 (596)
T ss_pred CceEEEEEEEEEE----------------------EEccCCCceeeEEEEEcCcCCCCcEEEECCCEEEEEEEeCCC-CC
Confidence 4578999999974 356888 5679999999999999999999999999999998 89
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYD 211 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d 211 (445)
|+|||||++|+.++||||+++ |||||+||++|+|+|+++ ++||||||||++.|+++||+|+|||++++.. + .+|+
T Consensus 82 ttIHWHGl~q~~t~w~DGv~~-TQcPI~PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~-~--~P~~ 157 (596)
T PLN00044 82 LLLTWHGVQQRKSAWQDGVGG-TNCAIPAGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVI-P--IPFG 157 (596)
T ss_pred ccEEECCccCCCCccccCCCC-CcCCcCCCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccc-c--cccc
Confidence 999999999999999999998 999999999999999995 8999999999999999999999999987432 1 1222
Q ss_pred c-CCcceEEEEeeeeccCCCCccCCCCC-CCCCCCCCeEEEccccCCCCCCC---CCcccceEEEecCcEEEEEEEccCC
Q psy16562 212 F-DLYSHVIIVTDWMHSMTDSKFPGNTY-NDTRIKPDAILINGQNQNPKDNS---PRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 212 ~-d~~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~~~~~~lING~~~~~~~~~---~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
. |..|.+|+|+||++.+... +..... ......+++++|||++....+.. .....+.|+|++|++|||||||++.
T Consensus 158 ~~~~~e~~i~l~DW~~~~~~~-~~~~l~~g~~~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~ 236 (596)
T PLN00044 158 FPDGGDITLFIADWYARDHRA-LRRALDAGDLLGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGV 236 (596)
T ss_pred CCcccceEEEecccccCCHHH-HHHHHhcCCCCCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccC
Confidence 2 2237999999999976443 111111 11124579999999976521111 1234568999999999999999998
Q ss_pred CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCc-eEEEEEEec---C---CCceeeEEEEEc
Q psy16562 287 LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNN-LYWMQAKTL---C---DSITAEAVLQYE 359 (445)
Q Consensus 287 ~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G-~y~~~~~~~---~---~~~~~~ail~y~ 359 (445)
. +.+.|+|++|.|+||++||.+++|..++.+.|++||||||+|+++|+++ +|||++... | +...+.|||+|.
T Consensus 237 ~-~~~~fsIdgH~mtVIa~DG~~v~P~~vd~i~I~~GQRydVLV~a~q~~~~~Y~i~a~~~~~~~~~~~~~~~~AIl~Y~ 315 (596)
T PLN00044 237 A-TSLNFRIQGHNLLLVEAEGSYTSQQNYTNLDIHVGQSYSFLLTMDQNASTDYYVVASARFVDAAVVDKLTGVAILHYS 315 (596)
T ss_pred C-ceEEEEECCCEEEEEEeCCcccCceeeeeEEEcCCceEEEEEECCCCCCCceEEEEecccccCccccCcceeEEEEEC
Confidence 7 5899999999999999999999999999999999999999999999765 899998653 2 456788999998
Q ss_pred CCC
Q psy16562 360 GEK 362 (445)
Q Consensus 360 ~~~ 362 (445)
+..
T Consensus 316 ~~~ 318 (596)
T PLN00044 316 NSQ 318 (596)
T ss_pred CCC
Confidence 754
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-67 Score=552.67 Aligned_cols=270 Identities=25% Similarity=0.433 Sum_probs=231.2
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
++.+|+|+|++. .+.+||++|.+++|||++|||+|++++||+|+|+|+|+|+ ++++|
T Consensus 15 ~~~~~~~~vt~~----------------------~~~pdg~~~~~~~vNGq~PGP~I~~~~GD~v~V~v~N~L~-~~tti 71 (536)
T PLN02792 15 DTLFYNWRVTYG----------------------NISLLTLPRRGILINGQFPGPEIRSLTNDNLVINVHNDLD-EPFLL 71 (536)
T ss_pred CeEEEEEEEEEE----------------------EeCCCCeEEEEEEECCCCCCCcEEEECCCEEEEEEEeCCC-CCcCE
Confidence 346899999975 3568999999999999999999999999999999999998 99999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
||||++|++++||||+++ |||||+||++|+|+|+++ ++||||||||.+.|+.+||+|+|||++++.. +. +++...
T Consensus 72 HWHGl~q~~~~~~DGv~~-tqcPI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~-~~--p~~~~d 147 (536)
T PLN02792 72 SWNGVHMRKNSYQDGVYG-TTCPIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRI-PV--PFPEPA 147 (536)
T ss_pred eCCCcccCCCCccCCCCC-CcCccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCccc-Cc--CCCccc
Confidence 999999999999999988 999999999999999995 8999999999999999999999999875332 21 222112
Q ss_pred cceEEEEeeeeccCCCCccCCCCCC--CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTYN--DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
.|++|+|+||++..... +...... ..+..++++||||++... .+.|+|++|++|||||||++.. +.+.
T Consensus 148 ~e~~i~l~Dw~~~~~~~-~~~~~~~g~~~~~~~d~~liNG~~~~~--------~~~~~v~~Gk~yRlRliNa~~~-~~~~ 217 (536)
T PLN02792 148 GDFTFLIGDWYRRNHTT-LKKILDGGRKLPLMPDGVMINGQGVSY--------VYSITVDKGKTYRFRISNVGLQ-TSLN 217 (536)
T ss_pred ceeEEEecccccCCHHH-HHHHhhccCcCCCCCCEEEEeccCCCC--------cceEEECCCCEEEEEEEEcCCC-ceEE
Confidence 37899999999986543 1111111 112378999999997642 2589999999999999999987 4899
Q ss_pred EEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCCC
Q psy16562 293 FTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGEK 362 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~~ 362 (445)
|+|+||.|+||++||++++|..++.+.|+|||||||+|++++++|+|||++... +....+.|||+|.++.
T Consensus 218 f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~GqRydVlV~a~~~~g~Y~i~a~~~~~~~~~~~~ail~Y~g~~ 289 (536)
T PLN02792 218 FEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTMDQPPQNYSIVVSTRFIAAKVLVSSTLHYSNSK 289 (536)
T ss_pred EEECCcEEEEEEeCCccCCCcceeEEEEccCceEEEEEEcCCCCceEEEEEEeccCCCCCceEEEEEECCCC
Confidence 999999999999999999999999999999999999999999889999999875 5567788999998753
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-67 Score=553.67 Aligned_cols=278 Identities=29% Similarity=0.521 Sum_probs=231.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
++++|+|+|++. .+++||++|.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|
T Consensus 2 ~~r~y~~~it~~----------------------~~~pdG~~~~~~~~NG~~PGP~i~~~~GD~v~v~v~N~l~-~~tsi 58 (539)
T TIGR03389 2 EVRHYTFDVQEK----------------------NVTRLCSTKSILTVNGKFPGPTLYAREGDTVIVNVTNNVQ-YNVTI 58 (539)
T ss_pred ceEEEEEEEEEE----------------------EeccCCcEeEEEEECCcccCCEEEEEcCCEEEEEEEeCCC-CCeeE
Confidence 578999999974 3578999999999999999999999999999999999999 89999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
||||++|.+++||||+|++|||||+||++|+|+|++. ++||||||||...|+ +||+|+|||+++.+.. . +++...
T Consensus 59 HwHGl~q~~~~~~DGv~~vTq~pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~-~Gl~G~lIV~~~~~~~-~--~~~~~d 134 (539)
T TIGR03389 59 HWHGVRQLRNGWADGPAYITQCPIQPGQSYVYNFTITGQRGTLWWHAHISWLR-ATVYGAIVILPKPGVP-Y--PFPKPD 134 (539)
T ss_pred ecCCCCCCCCCCCCCCcccccCCcCCCCeEEEEEEecCCCeeEEEecCchhhh-ccceEEEEEcCCCCCC-C--CCCCCC
Confidence 9999999999999999999999999999999999995 999999999998765 5999999999875321 1 121112
Q ss_pred cceEEEEeeeeccCCCCccCCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEE
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 293 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~ 293 (445)
.|++|+|+||++......+..... ......++++||||+..+...+. ....+.|+|++|++|||||||++.. +.+.|
T Consensus 135 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~-~~~~~~i~v~~G~~~RlRlINa~~~-~~~~~ 212 (539)
T TIGR03389 135 REVPIILGEWWNADVEAVINQANQTGGAPNVSDAYTINGHPGPLYNCS-SKDTFKLTVEPGKTYLLRIINAALN-DELFF 212 (539)
T ss_pred ceEEEEecccccCCHHHHHHHHHhcCCCCCccceEEECCCcCCCCCCC-CCCceEEEECCCCEEEEEEEeccCC-ceEEE
Confidence 378999999999765432211111 11123568999999965321111 1234689999999999999999986 58999
Q ss_pred EecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C----CCceeeEEEEEcCCC
Q psy16562 294 TIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C----DSITAEAVLQYEGEK 362 (445)
Q Consensus 294 ~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~----~~~~~~ail~y~~~~ 362 (445)
+|++|.|+||++||.+++|..++++.|++||||||+|++++.+|+|||++... | ....+.|||+|.+..
T Consensus 213 ~idgH~~~VIa~DG~~~~P~~~~~l~i~~GqRydVlv~a~~~~g~y~i~~~~~~~~~~~~~~~~~~ail~Y~~~~ 287 (539)
T TIGR03389 213 AIANHTLTVVEVDATYTKPFKTKTIVIGPGQTTNVLLTADQSPGRYFMAARPYMDAPGAFDNTTTTAILQYKGTS 287 (539)
T ss_pred EECCCeEEEEEeCCcccCceEeCeEEecCCCEEEEEEECCCCCceEEEEEeccccCccCCCCcceEEEEEECCCC
Confidence 99999999999999999999999999999999999999999889999999865 3 235688999998753
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-66 Score=547.02 Aligned_cols=278 Identities=33% Similarity=0.624 Sum_probs=232.7
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
+++|+|+|++. .+++||++|.+|+|||++|||+|++++||+|+|+|+|+|..++++||
T Consensus 1 ~~~y~~~vt~~----------------------~~~pdG~~~~~~~~Ng~~pGP~i~~~~Gd~v~v~v~N~l~~~~t~iH 58 (541)
T TIGR03388 1 IRHYKWEVEYE----------------------FWSPDCFEKLVIGINGQFPGPTIRAQAGDTIVVELTNKLHTEGVVIH 58 (541)
T ss_pred CEEEEEEEEEE----------------------EecCCCeEeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCccEE
Confidence 47899999974 46799999999999999999999999999999999999976789999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcc
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYS 216 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e 216 (445)
|||++|.+++||||+|++|||+|+||++|+|+|++.++||||||||.+.|+++||+|+|||+++.... .++++| .|
T Consensus 59 wHGl~~~~~~~~DG~~~vtq~~I~PG~s~~y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~---~p~~~d-~e 134 (541)
T TIGR03388 59 WHGIRQIGTPWADGTAGVTQCAINPGETFIYNFVVDRPGTYFYHGHYGMQRSAGLYGSLIVDVPDGEK---EPFHYD-GE 134 (541)
T ss_pred ecCcCCcCCcccCCCCccccCCcCCCCEEEEEEEcCCCEEEEEEecchHHhhccceEEEEEecCCCCC---CCcccc-ce
Confidence 99999999999999999999999999999999999999999999999999999999999999875321 234455 37
Q ss_pred eEEEEeeeeccCCCCccCCCCC-C-CCCCCCCeEEEccccCCCCCCC----------------CCcccceEEEecCcEEE
Q psy16562 217 HVIIVTDWMHSMTDSKFPGNTY-N-DTRIKPDAILINGQNQNPKDNS----------------PRVPMHFFKVQRDKRYL 278 (445)
Q Consensus 217 ~~l~l~D~~~~~~~~~~~~~~~-~-~~~~~~~~~lING~~~~~~~~~----------------~~~p~~~i~v~~G~~~r 278 (445)
++|+|+||+++...+....... . .....++++||||++...+... .......|+|++|++||
T Consensus 135 ~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~R 214 (541)
T TIGR03388 135 FNLLLSDWWHKSIHEQEVGLSSKPMRWIGEPQSLLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYR 214 (541)
T ss_pred EEEEeecccCCCHHHHHhhcccCCCcCCCCCcceEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEE
Confidence 9999999999865332111111 0 1113578999999986532100 01123468999999999
Q ss_pred EEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCC-ceEEEEEEec--C-CCceeeE
Q psy16562 279 MRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSN-NLYWMQAKTL--C-DSITAEA 354 (445)
Q Consensus 279 lRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~-G~y~~~~~~~--~-~~~~~~a 354 (445)
|||||++.. +.+.|+|++|.|+|||+||++++|..++.+.|+|||||||+|++++.+ |+|||++... + ....+.|
T Consensus 215 lRliNa~~~-~~~~~~id~h~~~VIa~DG~~v~P~~v~~l~i~~GqR~dvlv~~~~~~~~~y~ira~~~~~~~~~~~~~a 293 (541)
T TIGR03388 215 LRIASTTAL-AALNFAIEGHKLTVVEADGNYVEPFTVKDIDIYSGETYSVLLTTDQDPSRNYWISVGVRGRKPNTPPGLT 293 (541)
T ss_pred EEEEccccc-ceEEEEECCCEEEEEEeCCEecccceeCeEEecCCCEEEEEEeCCCCCCCcEEEEEecccCCCCCccEEE
Confidence 999999977 589999999999999999999999999999999999999999999866 5899998776 2 2345789
Q ss_pred EEEEcCC
Q psy16562 355 VLQYEGE 361 (445)
Q Consensus 355 il~y~~~ 361 (445)
||+|.+.
T Consensus 294 iL~Y~~~ 300 (541)
T TIGR03388 294 VLNYYPN 300 (541)
T ss_pred EEEECCC
Confidence 9999864
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-65 Score=542.94 Aligned_cols=281 Identities=31% Similarity=0.564 Sum_probs=232.7
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+.+||++|.+++|||++|||+|++++||+|+|+|+|+|+.++|+
T Consensus 21 ~~~~~~~~~vt~~----------------------~~~pdG~~~~v~~vNg~~pGP~i~~~~Gd~v~v~v~N~l~~~~ts 78 (574)
T PLN02191 21 AAVREYTWEVEYK----------------------YWWPDCKEGAVMTVNGQFPGPTIDAVAGDTIVVHLTNKLTTEGLV 78 (574)
T ss_pred cceEEEEEEEEEE----------------------EeccCCceeeEEEECCcCCCCeEEEEcCCEEEEEEEECCCCCCcc
Confidence 5788999999974 467899999999999999999999999999999999999867899
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
|||||++|.+++||||+|++|||||+||++|+|+|+++++||||||||.+.|+.+||+|+|||+++... . .++.+|.
T Consensus 79 iHwHGl~~~~~~~~DGv~gvtq~pI~PG~s~~Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~--~-~~~~~d~ 155 (574)
T PLN02191 79 IHWHGIRQKGSPWADGAAGVTQCAINPGETFTYKFTVEKPGTHFYHGHYGMQRSAGLYGSLIVDVAKGP--K-ERLRYDG 155 (574)
T ss_pred EECCCCCCCCCccccCCCccccCCcCCCCeEEEEEECCCCeEEEEeeCcHHHHhCCCEEEEEEccCCCC--C-CCCCCCe
Confidence 999999999999999999999999999999999999999999999999999999999999999875322 1 1233443
Q ss_pred cceEEEEeeeeccCCCCccCCCC--CCCCCCCCCeEEEccccCCCCCCC-----------------CCcccceEEEecCc
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNT--YNDTRIKPDAILINGQNQNPKDNS-----------------PRVPMHFFKVQRDK 275 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~-----------------~~~p~~~i~v~~G~ 275 (445)
|++|+|+||++........... .......++++||||++...+... ......+|+|++|+
T Consensus 156 -e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~ 234 (574)
T PLN02191 156 -EFNLLLSDWWHESIPSQELGLSSKPMRWIGEAQSILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNK 234 (574)
T ss_pred -eEEEeeeccccCChHHHHHhhccCCCCcCCCCCceEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCC
Confidence 7899999999975332111100 001124578999999986532100 01122369999999
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCC-ceEEEEEEec--C-CCce
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSN-NLYWMQAKTL--C-DSIT 351 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~-G~y~~~~~~~--~-~~~~ 351 (445)
+|||||||+++. +.+.|+|++|.|+|||+||++++|..++.+.|++||||||+|++++.+ ++|||++... | ....
T Consensus 235 ~yRlRiINa~~~-~~~~~~idgH~~tVIa~DG~~v~P~~v~~l~i~~GqRydVlV~a~~~~~~~y~ira~~~~~~~~~~~ 313 (574)
T PLN02191 235 TYRIRLASTTAL-ASLNLAVQGHKLVVVEADGNYITPFTTDDIDIYSGESYSVLLTTDQDPSQNYYISVGVRGRKPNTTQ 313 (574)
T ss_pred EEEEEEEecCCc-eeEEEEECCCeEEEEEcCCeeccceEeeeEEEcCCCeEEEEEECCCCCCCCEEEEEEccccCCCCCC
Confidence 999999999987 589999999999999999999999999999999999999999999976 5899999765 3 2334
Q ss_pred eeEEEEEcCCC
Q psy16562 352 AEAVLQYEGEK 362 (445)
Q Consensus 352 ~~ail~y~~~~ 362 (445)
..|||+|.+..
T Consensus 314 ~~ail~Y~~~~ 324 (574)
T PLN02191 314 ALTILNYVTAP 324 (574)
T ss_pred ceEEEEECCCC
Confidence 57999997644
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-65 Score=537.91 Aligned_cols=264 Identities=29% Similarity=0.540 Sum_probs=222.5
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEE
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKF 169 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f 169 (445)
.+++||++|.+|+|||++|||+|++++||+|+|+|+|+|+.++|+|||||++|++++||||+|++|||||+||++|+|+|
T Consensus 19 ~~~~~g~~r~~~~~NG~~PGP~I~~~~GD~v~V~v~N~L~~~~ttiHwHGi~~~~~~~~DGvp~vTQcpI~PG~sf~Y~f 98 (538)
T TIGR03390 19 NIKIACSSRYSVVVNGTSPGPEIRLQEGQTTWIRVYNDIPDNNVTMHWHGLTQRTAPFSDGTPLASQWPIPPGHFFDYEI 98 (538)
T ss_pred EeccCCeEEEEEEECCcCCCCeEEEeCCCEEEEEEEECCCCCCceEECCCCCCCCCCCCCCCcccccCCCCCCCcEEEEE
Confidence 46789999999999999999999999999999999999987899999999999999999999999999999999999999
Q ss_pred ecC--CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCC--CCCCCC
Q psy16562 170 PAM--PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYN--DTRIKP 245 (445)
Q Consensus 170 ~~~--~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~ 245 (445)
++. ++||||||||.+.|+. ||+|+|||++++.. ++++|. |++|+|+||++....+........ .....+
T Consensus 99 ~~~~~q~GT~WYHsH~~~Q~~-~l~G~lIV~~~~~~-----~~~~d~-e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~ 171 (538)
T TIGR03390 99 KPEPGDAGSYFYHSHVGFQAV-TAFGPLIVEDCEPP-----PYKYDD-ERILLVSDFFSATDEEIEQGLLSTPFTWSGET 171 (538)
T ss_pred EecCCCCeeeEEecCCchhhh-cceeEEEEccCCcc-----CCCccC-cEEEEEeCCCCCCHHHHHhhhhccCCccCCCC
Confidence 974 8999999999999987 59999999976321 244553 799999999998654422111111 112356
Q ss_pred CeEEEccccCCCCCC-----CCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccc-eEEEccCCCcceeeEecEEE
Q psy16562 246 DAILINGQNQNPKDN-----SPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQ-LQVIASDGTAVEPLVVDSVT 319 (445)
Q Consensus 246 ~~~lING~~~~~~~~-----~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~-~~via~DG~~v~P~~~~~~~ 319 (445)
+++||||++.+.... ......+.++|++|++|||||||++.. +.+.|+|++|. |+|||+||++++|..++.+.
T Consensus 172 d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~-~~~~~~idgH~~~~VIa~DG~~~~P~~v~~l~ 250 (538)
T TIGR03390 172 EAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATAL-SLISLGIEDHENLTIIEADGSYTKPAKIDHLQ 250 (538)
T ss_pred ceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCc-eEEEEEECCCCeEEEEEeCCCCCCceEeCeEE
Confidence 899999997543210 112345789999999999999999987 48999999999 99999999999999999999
Q ss_pred ecCCceEEEEEecCCC-------CceEEEEEEec--CCCceeeEEEEEcCC
Q psy16562 320 LFPGDRVDVIIHTNQS-------NNLYWMQAKTL--CDSITAEAVLQYEGE 361 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~-------~G~y~~~~~~~--~~~~~~~ail~y~~~ 361 (445)
|++||||||+|++++. +|+|||++... +....+.|||+|.+.
T Consensus 251 l~~GqRydVlv~~~~~~~~~~~~~~~Y~ir~~~~~~~~~~~~~aiL~Y~~~ 301 (538)
T TIGR03390 251 LGGGQRYSVLFKAKTEDELCGGDKRQYFIQFETRDRPKVYRGYAVLRYRSD 301 (538)
T ss_pred EccCCEEEEEEECCCccccccCCCCcEEEEEeecCCCCcceEEEEEEeCCC
Confidence 9999999999999975 48999999765 455678999999654
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-64 Score=536.11 Aligned_cols=281 Identities=32% Similarity=0.625 Sum_probs=236.8
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
.+++++|+|+|++. .+++||++|.+|+|||++|||+|++++||+|+|+|+|+|..+++
T Consensus 21 ~~~~~~y~~~vt~~----------------------~~~pdG~~r~~~~~Ng~~pgP~i~~~~Gd~v~v~v~N~l~~~~~ 78 (566)
T PLN02604 21 EARIRRYKWEVKYE----------------------YKSPDCFKKLVITINGRSPGPTILAQQGDTVIVELKNSLLTENV 78 (566)
T ss_pred cCcEEEEEEEEEEE----------------------EECCCCceeeEEEECCccCCCcEEEECCCEEEEEEEeCCCCCCC
Confidence 47899999999974 46799999999999999999999999999999999999865799
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
+|||||+++.+++||||++++|||+|+||++|+|+|+++++||||||||.+.|+.+||+|+|||+++.... .++++|
T Consensus 79 ~iH~HG~~~~~~~~~DG~~~~tq~~i~pg~s~~y~f~~~~~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~---~p~~~d 155 (566)
T PLN02604 79 AIHWHGIRQIGTPWFDGTEGVTQCPILPGETFTYEFVVDRPGTYLYHAHYGMQREAGLYGSIRVSLPRGKS---EPFSYD 155 (566)
T ss_pred CEEeCCCCCCCCccccCCCccccCccCCCCeEEEEEEcCCCEEEEEeeCcHHHHhCCCeEEEEEEecCCCC---CccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999874321 123444
Q ss_pred CcceEEEEeeeeccCCCCccCCCCC--CCCCCCCCeEEEccccCCCCCC------------C--CCcccceEEEecCcEE
Q psy16562 214 LYSHVIIVTDWMHSMTDSKFPGNTY--NDTRIKPDAILINGQNQNPKDN------------S--PRVPMHFFKVQRDKRY 277 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~~~~~~--~~~~~~~~~~lING~~~~~~~~------------~--~~~p~~~i~v~~G~~~ 277 (445)
. |.+|+|+||++....+.+..... ......+++++|||++.+.+.. . .....+.|+|++|++|
T Consensus 156 ~-d~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~ 234 (566)
T PLN02604 156 Y-DRSIILTDWYHKSTYEQALGLSSIPFDWVGEPQSLLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTY 234 (566)
T ss_pred c-ceEEEeeccccCCHHHHHHhhccCCCccCCCCCceEEcCCCCCCCccccCccccccccccCCCCCCceEEEecCCCEE
Confidence 3 68999999999765332221111 0112367999999998764210 0 1123458999999999
Q ss_pred EEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCc-eEEEEEEec--C-CCceee
Q psy16562 278 LMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNN-LYWMQAKTL--C-DSITAE 353 (445)
Q Consensus 278 rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G-~y~~~~~~~--~-~~~~~~ 353 (445)
||||||++.. +.+.|+|++|.|+|||+||++++|..++.+.|++||||||+|++++.+| +|||++... | ....+.
T Consensus 235 RlRlINa~~~-~~~~~sidgH~~~VIa~DG~~v~P~~v~~l~l~~GqRydvlV~~~~~~~~~y~ira~~~~~~~~~~~~~ 313 (566)
T PLN02604 235 RLRISSLTAL-SALSFQIEGHNMTVVEADGHYVEPFVVKNLFIYSGETYSVLVKADQDPSRNYWVTTSVVSRNNTTPPGL 313 (566)
T ss_pred EEEEEecccc-ceEEEEECCCEEEEEEeCCEecccceeeeEEEccCCeEEEEEECCCCCCCCEEEEEecccCCCCCccee
Confidence 9999999987 5899999999999999999999999999999999999999999998765 899998755 3 356789
Q ss_pred EEEEEcCC
Q psy16562 354 AVLQYEGE 361 (445)
Q Consensus 354 ail~y~~~ 361 (445)
|||+|.+.
T Consensus 314 aIL~Y~~~ 321 (566)
T PLN02604 314 AIFNYYPN 321 (566)
T ss_pred EEEEECCC
Confidence 99999864
|
|
| >KOG1263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-63 Score=514.26 Aligned_cols=273 Identities=30% Similarity=0.569 Sum_probs=236.7
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
..++|.|.|++++. ++.++|.++.+++|||+||||+|+|++||+|+|+|.|++. +++
T Consensus 25 ~~~~~~~~~~v~~~----------------------~~s~l~~~~~vi~iNG~fPGP~I~~~~gD~ivV~v~N~~~-~~~ 81 (563)
T KOG1263|consen 25 EAPIRFHTWKVTYG----------------------TASPLCVEKQVITINGQFPGPTINAEEGDTIVVNVVNRLD-EPF 81 (563)
T ss_pred cCceEEEEeeEEee----------------------eeccCCccceeEeecCCCCCCeEEEEeCCEEEEEEEeCCC-Cce
Confidence 47899999999985 4567777999999999999999999999999999999998 999
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCcccc
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDF 212 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~ 212 (445)
+|||||++|..++|+|| +++|||||+||++|+|+|+++ +.||||||+|+++|+++|++|+|||+++.... -+++.
T Consensus 82 sihWhGv~q~kn~w~DG-~~~TqCPI~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p---~pf~~ 157 (563)
T KOG1263|consen 82 SIHWHGVRQRKNPWQDG-VYITQCPIQPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLP---VPFPK 157 (563)
T ss_pred EEEeccccccCCccccC-CccccCCcCCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCC---CCCCC
Confidence 99999999999999999 999999999999999999998 99999999999999999999999999875432 23333
Q ss_pred CCcceEEEEeeeecc-CCCCccCCCCCCCC--CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 213 DLYSHVIIVTDWMHS-MTDSKFPGNTYNDT--RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 213 d~~e~~l~l~D~~~~-~~~~~~~~~~~~~~--~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
...|++|+|+||+++ .... +...+...+ ...+|.++|||+..+... . .+.++|++||+|||||+|++...
T Consensus 158 pd~E~~ill~dW~~~~~~~~-l~~~~~~~~~~p~~~D~~~iNg~~g~~~~----~-~~~l~v~pGktY~lRiiN~g~~~- 230 (563)
T KOG1263|consen 158 PDKEFTILLGDWYKNLNHKN-LKNFLDRTGALPNPSDGVLINGRSGFLYN----C-TPTLTVEPGKTYRLRIINAGLNT- 230 (563)
T ss_pred CCceeEEEeEeeccccCHHH-HHHhhccCCCCCCCCCceEECCCCCcccC----c-eeEEEEcCCCEEEEEEEcccccc-
Confidence 345999999999996 3332 222222111 223899999999854211 1 47899999999999999999875
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC----CceeeEEEEEcC
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD----SITAEAVLQYEG 360 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~----~~~~~ail~y~~ 360 (445)
.+.|+|++|.|+||++||.+++|..++++.|.|||||+|+++++|.+++|||.+... +. ...+.++++|.+
T Consensus 231 ~l~F~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~i~~~~~~~~~~~~~~~t~~~~l~y~~ 307 (563)
T KOG1263|consen 231 SLNFSIANHQLTVVEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPGDYYIAASPYFDASNVPFNLTTTGILRYSG 307 (563)
T ss_pred ceEEEECCeEEEEEEecceEEeeeeeceEEEcCCcEEEEEEeCCCCCCcEEEEEEeeeccCCcceeeeEEEEEEEeC
Confidence 678999999999999999999999999999999999999999999999999999887 44 788999999998
|
|
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-61 Score=508.68 Aligned_cols=264 Identities=29% Similarity=0.481 Sum_probs=217.5
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
-.+|+|+++.. .+..+|+.+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+||
T Consensus 45 ~~~~~L~v~~~----------------------~~~~~G~~~~~~~~Ng~~PGP~ir~~~Gd~v~v~v~N~l~-~~tsiH 101 (587)
T TIGR01480 45 GTEFDLTIGET----------------------MVNFTGRARPAITVNGSIPGPLLRWREGDTVRLRVTNTLP-EDTSIH 101 (587)
T ss_pred CceEEEEEEEE----------------------EEecCCeEEEEEEECCccCCceEEEECCCEEEEEEEcCCC-CCceEE
Confidence 36899999864 3456899999999999999999999999999999999999 899999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcc
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYS 216 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e 216 (445)
|||+++.. +|||+|++|||+|+||++|+|+|++.++||||||||.+.|+..||+|+|||++++. + ++++|. |
T Consensus 102 wHGl~~~~--~~DGvP~vt~~~I~PG~s~~Y~f~~~~~GTyWYHsH~~~q~~~GL~G~lIV~~~~~-~----p~~~D~-E 173 (587)
T TIGR01480 102 WHGILLPF--QMDGVPGVSFAGIAPGETFTYRFPVRQSGTYWYHSHSGFQEQAGLYGPLIIDPAEP-D----PVRADR-E 173 (587)
T ss_pred cCCCcCCc--cccCCCcccccccCCCCeEEEEEECCCCeeEEEecCchhHhhccceEEEEECCCcc-c----cCCCCc-e
Confidence 99999864 79999999999999999999999999999999999999999999999999986532 2 234553 7
Q ss_pred eEEEEeeeeccCCCCccCC--------------------CCCCCC------------------C------CCCCeEEEcc
Q psy16562 217 HVIIVTDWMHSMTDSKFPG--------------------NTYNDT------------------R------IKPDAILING 252 (445)
Q Consensus 217 ~~l~l~D~~~~~~~~~~~~--------------------~~~~~~------------------~------~~~~~~lING 252 (445)
++|+|+||++......+.. .....+ . .....+||||
T Consensus 174 ~vl~L~Dw~~~~p~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG 253 (587)
T TIGR01480 174 HVVLLSDWTDLDPAALFRKLKVMAGHDNYYKRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNG 253 (587)
T ss_pred EEEEeeecccCCHHHHHHhhhcccccccccccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcC
Confidence 9999999997543221100 000000 0 0112478999
Q ss_pred ccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEec
Q psy16562 253 QNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 253 ~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
+.... .+++.+++|++|||||||+++. +.+.|+|++|.|+||++||.+++|..++.+.|+|||||||+|++
T Consensus 254 ~~~~~--------~~~~~v~~G~rvRLR~INas~~-~~f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~pGeRyDVlV~~ 324 (587)
T TIGR01480 254 TTPAG--------NWTGLFRPGEKVRLRFINGSAM-TYFDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAPAETFDVIVEP 324 (587)
T ss_pred ccCCC--------CceEEECCCCEEEEEEEecCCC-ceEEEEECCCEEEEEEcCCcCcCceEeCeEEEcCcceeEEEEec
Confidence 85421 3578999999999999999987 58999999999999999999999999999999999999999998
Q ss_pred CCCCceEEEEEEecCCCceeeEEEEEcCC
Q psy16562 333 NQSNNLYWMQAKTLCDSITAEAVLQYEGE 361 (445)
Q Consensus 333 ~~~~G~y~~~~~~~~~~~~~~ail~y~~~ 361 (445)
++ .|.|++.+.......+..++|.+.+.
T Consensus 325 ~~-~g~~~i~a~~~~~~~~~~~~l~~~~~ 352 (587)
T TIGR01480 325 TG-DDAFTIFAQDSDRTGYARGTLAVRLG 352 (587)
T ss_pred CC-CceEEEEEEecCCCceEEEEEecCCC
Confidence 75 58999998765444566777777643
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-60 Score=499.19 Aligned_cols=328 Identities=22% Similarity=0.310 Sum_probs=249.5
Q ss_pred CCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-
Q psy16562 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM- 172 (445)
Q Consensus 94 dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~- 172 (445)
+|....+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+ .+||+| ||+|+||++|+|+|+++
T Consensus 61 ~~~~t~~~~yNg~~PGPtIr~~~Gd~v~v~~~N~L~-~~ttiHwHGl~~~~--~~DG~p---q~~I~PG~s~~Y~f~~~q 134 (523)
T PRK10965 61 GKTATATWGYNGNLLGPAVRLQRGKAVTVDITNQLP-EETTLHWHGLEVPG--EVDGGP---QGIIAPGGKRTVTFTVDQ 134 (523)
T ss_pred CCceeEEEEECCCCCCceEEEECCCEEEEEEEECCC-CCccEEcccccCCC--ccCCCC---CCCCCCCCEEEEEeccCC
Confidence 455667999999999999999999999999999999 89999999999976 599987 89999999999999998
Q ss_pred CCcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCccccCCcceEEEEeeeeccCCCCccCC-C-CCCCCCCCC
Q psy16562 173 PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELYDFDLYSHVIIVTDWMHSMTDSKFPG-N-TYNDTRIKP 245 (445)
Q Consensus 173 ~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~-~-~~~~~~~~~ 245 (445)
++||||||||. +.|+++||+|+|||+++.+.. +....|+.+ |++|+|+||+++..+..... . .....+..+
T Consensus 135 ~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~--d~~lvlqD~~~~~~g~~~~~~~~~~~~~g~~g 212 (523)
T PRK10965 135 PAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVD--DIPVILQDKRFSADGQIDYQLDVMTAAVGWFG 212 (523)
T ss_pred CCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCc--eeeEEEEeeeeCCCCceeccccccccccCccC
Confidence 48999999995 799999999999999875432 112234444 79999999999766542211 1 112234678
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCC
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPG 323 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pG 323 (445)
+.++|||+.++ .+.++ +++|||||+|++.. +.+.|++ ++|.|+|||+||+++ +|..++.+.|+||
T Consensus 213 d~~lVNG~~~p-----------~~~v~-~~~~RlRliNas~~-r~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~lapG 279 (523)
T PRK10965 213 DTLLTNGAIYP-----------QHAAP-RGWLRLRLLNGCNA-RSLNLATSDGRPLYVIASDGGLLAEPVKVSELPILMG 279 (523)
T ss_pred CeEEECCcccc-----------eeecC-CCEEEEEEEeccCC-ceEEEEEcCCceEEEEEeCCCcccCccEeCeEEECcc
Confidence 99999999664 56665 67999999999976 5789998 899999999999997 5999999999999
Q ss_pred ceEEEEEecCCCCceEEEEEEec---C----CCceeeEEEEEcCCCC-----CC-----CCCCCCCC-------CC-CC-
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL---C----DSITAEAVLQYEGEKL-----TY-----VSKRPKSD-------SF-PR- 377 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~---~----~~~~~~ail~y~~~~~-----~~-----~~~~P~~~-------~~-~~- 377 (445)
|||||+|++++ .+.|++..... . .......++++..... .| ..+.|... .+ ..
T Consensus 280 eR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~r~~~l~~~~ 358 (523)
T PRK10965 280 ERFEVLVDTSD-GKAFDLVTLPVSQMGMALAPFDKPLPVLRIQPLLISASGTLPDSLASLPALPSLEGLTVRRLQLSMDP 358 (523)
T ss_pred ceEEEEEEcCC-CceEEEEEecccCcccccccCCCceeEEEEeccCcCCCCcCChhhccCCCCCcccccceeEEEEeecc
Confidence 99999999987 57888877533 1 0111234444442211 00 01111100 00 00
Q ss_pred --------------------CC---------------------------------CCCCCCCCcc--ceeEeeCCcEEEE
Q psy16562 378 --------------------GK---------------------------------PKDNSPRVPM--HFFKVQRDKRYLM 402 (445)
Q Consensus 378 --------------------~~---------------------------------~~~~~~~~~~--~~~~v~~G~~~~~ 402 (445)
.. -..|+..++. ..++++.|++++|
T Consensus 359 ~~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w 438 (523)
T PRK10965 359 RLDMMGMQMLMEKYGDQAMAGMDMDHMMGHMGHGNMDHMNHGAADAGPAFDFHHANKINGKAFDMNKPMFAAKKGQYERW 438 (523)
T ss_pred ccchhhhhhccccccccccccccccccccccccccccccccccccccccccccccccCCCeECCCCCcceecCCCCEEEE
Confidence 00 0133333332 2367999999999
Q ss_pred EEEcCCC-CccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 403 RIIGGSC-LACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 403 rliN~s~-~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
+|+|.+. +.||| ||||++|||+++||.++. +.|+|||.|.|
T Consensus 439 ~i~N~~~~~~Hp~--HlHg~~F~Vl~~~g~~~~~~~~~wkDTv~v~~ 483 (523)
T PRK10965 439 VISGVGDMMLHPF--HIHGTQFRILSENGKPPAAHRAGWKDTVRVEG 483 (523)
T ss_pred EEEeCCCCCccCe--EEeCcEEEEEEecCCCCCccccccccEEEECC
Confidence 9999985 68998 999999999999999876 47999999965
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-57 Score=472.55 Aligned_cols=325 Identities=18% Similarity=0.264 Sum_probs=244.5
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
..|..+.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||++++.. .+||++ ++|+||++|+|+|.+.
T Consensus 60 ~~g~~~~v~~~ng~~pGPtir~~~Gd~v~v~v~N~L~-~~ttiHwHGl~~~~~-~~~g~~----~~I~PG~~~~y~f~~~ 133 (471)
T PRK10883 60 TGGTKASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT-EPVSMTVSGLQVPGP-LMGGPA----RMMSPNADWAPVLPIR 133 (471)
T ss_pred cCCceeeEEEECCcccCCeEEEECCCEEEEEEEeCCC-CCCceeECCccCCCC-CCCCcc----ccCCCCCeEEEEEecC
Confidence 3467889999999999999999999999999999998 899999999999875 577764 5899999999999887
Q ss_pred -CCcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCC
Q psy16562 173 -PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPD 246 (445)
Q Consensus 173 -~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
++||||||||. +.|+++||+|+|||+++.+.. +....|+.+ |++|+|+||+++........ .....+..++
T Consensus 134 ~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~--d~~l~l~D~~~~~~g~~~~~-~~~~~g~~gd 210 (471)
T PRK10883 134 QNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVD--DFPVIIQDKRLDNFGTPEYN-EPGSGGFVGD 210 (471)
T ss_pred CCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCc--ceeEEeeeeeeccCCCcccc-ccccCCccCC
Confidence 59999999995 469999999999999875432 222334444 89999999998765442221 1123456789
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCc
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGD 324 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGe 324 (445)
.++|||+.+ |.++|++| +|||||||++.. +.+.|+| ++|.|+||++||+++ +|..++++.|+|||
T Consensus 211 ~~lvNG~~~-----------p~~~v~~~-~~RlRliNas~~-~~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~pGe 277 (471)
T PRK10883 211 TLLVNGVQS-----------PYVEVSRG-WVRLRLLNASNA-RRYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAPGE 277 (471)
T ss_pred eeEECCccC-----------CeEEecCC-EEEEEEEEccCC-ceEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECCCC
Confidence 999999965 37899875 899999999987 5899999 899999999997776 59999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec-C-----CC-c------eeeEEEEEcCCC--CCCCCCCCCC---------C-----CC
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL-C-----DS-I------TAEAVLQYEGEK--LTYVSKRPKS---------D-----SF 375 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~-~-----~~-~------~~~ail~y~~~~--~~~~~~~P~~---------~-----~~ 375 (445)
||||+|++++ .+.+.+++-.. . .. . ....+++..... ......+|.. . .+
T Consensus 278 R~dvlVd~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~ 356 (471)
T PRK10883 278 RREILVDMSN-GDEVSITAGEAAGIVDRLRGFFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPDEIMEGSPIRSREI 356 (471)
T ss_pred eEEEEEECCC-CceEEEECCCccccccccccccCCccccccceeEEEEccccccCCCCcCChhhcCCCCCCCCCcceEEE
Confidence 9999999977 45666655211 0 00 0 112334433221 1001111110 0 00
Q ss_pred -CCC-CCCCCCCCCccc--eeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCC---eEEeEEEec
Q psy16562 376 -PRG-KPKDNSPRVPMH--FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP---LVVDSVTLF 444 (445)
Q Consensus 376 -~~~-~~~~~~~~~~~~--~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p---~~~Dtv~v~ 444 (445)
... ....|+..+... .++++.|++|+|+|.|. +.||| |||+|+|||+++||.+..| .|+|||.|.
T Consensus 357 ~l~~~~~~INg~~~~~~~~~~~~~~g~~e~W~~~n~--~~HP~--HlHg~~FqVl~~~G~~~~~~~~gwkDTV~v~ 428 (471)
T PRK10883 357 SLGDDLPGINGALWDMNRIDVTAQQGTWERWTVRAD--MPQAF--HIEGVMFLIRNVNGAMPFPEDRGWKDTVWVD 428 (471)
T ss_pred EecCCcCccCCcccCCCcceeecCCCCEEEEEEECC--CCcCE--eECCccEEEEEecCCCCCccccCcCcEEEcC
Confidence 011 112455544433 36799999999999886 57998 9999999999999997654 799999984
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=376.89 Aligned_cols=265 Identities=18% Similarity=0.233 Sum_probs=215.3
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC-C
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-R 131 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~ 131 (445)
+.+++++|+|++++.. ...++|..+.+|+|||++|||+|++++||+|+|+|+|++.. .
T Consensus 23 ~~~~~~~~~l~a~~~~---------------------~~~~~G~~~~~~~~nG~~pGP~irv~~Gd~v~v~v~N~~~~~~ 81 (311)
T TIGR02376 23 SGPKVVEVTMTIEEKK---------------------MVIDDGVTYQAMTFDGSVPGPLIRVHEGDYVELTLINPPTNTM 81 (311)
T ss_pred CCCcEEEEEEEEEEEE---------------------EEeCCCeEEEEEEECCcccCceEEEECCCEEEEEEEeCCCCCC
Confidence 3578999999999753 23358999999999999999999999999999999999852 4
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc----cchhhhcCceeEEEEeCCCCCCCCC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTADPHA 207 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H----~~~q~~~Gl~G~lIV~~~~~~~p~~ 207 (445)
++++||||.. ++||++.++| |+||++++|+|+++++|||||||| ++.|+..||+|+|||++++.. +
T Consensus 82 ~h~~h~H~~~-----~~dg~~~~~~--I~PG~t~ty~F~~~~~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~-- 151 (311)
T TIGR02376 82 PHNVDFHAAT-----GALGGAALTQ--VNPGETATLRFKATRPGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGL-P-- 151 (311)
T ss_pred ceeeeecCCC-----ccCCCCccee--ECCCCeEEEEEEcCCCEEEEEEcCCCCchhHHhhcCcceEEEeeccCCC-c--
Confidence 7899999862 5899988887 999999999999999999999999 468999999999999976321 1
Q ss_pred CccccCCcceEEEEeeeeccCCCCc---cCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEcc
Q psy16562 208 ELYDFDLYSHVIIVTDWMHSMTDSK---FPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGG 284 (445)
Q Consensus 208 ~~~d~d~~e~~l~l~D~~~~~~~~~---~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~ 284 (445)
++|. |++|+++||+++..... +...........++.++|||+.... .+.+++++|+++||||+|+
T Consensus 152 ---~~d~-e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~--------~~~~~v~~G~~~RlRiiNa 219 (311)
T TIGR02376 152 ---EYDK-EYYIGESDLYTPKDEGEGGAYEDDVAAMRTLTPTHVVFNGAVGAL--------TGDNALTAGVGERVLFVHS 219 (311)
T ss_pred ---Ccce-eEEEeeeeEeccccccccccccchHHHHhcCCCCEEEECCccCCC--------CCCcccccCCcEEEEEEcC
Confidence 3343 79999999998754321 1111111123567899999995421 1357899999999999999
Q ss_pred CCCceeEEEEecccceEEEccCCCcceee--EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcC
Q psy16562 285 SCLACPLIFTIEKHQLQVIASDGTAVEPL--VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEG 360 (445)
Q Consensus 285 ~~~~~~~~~~i~gh~~~via~DG~~v~P~--~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~ 360 (445)
+.. +.+.|++++|.+.+|+.||.++.+. .++++.|+||||+|++|++++ +|.|++++|.. .......++|.|.+
T Consensus 220 ~~~-~~~~~~~~g~~~~~v~~DG~~~~~~~~~~~~~~i~PG~R~dv~v~~~~-pG~y~~~~~~~~~~~~~g~~~~i~~~g 297 (311)
T TIGR02376 220 QPN-RDSRPHLIGGHGDYVWVTGKFANPPNRDVETWFIPGGSAAAALYTFEQ-PGVYAYVDHNLIEAFEKGAAAQVKVEG 297 (311)
T ss_pred CCC-CCCCCeEecCCceEEEECCcccCCCCCCcceEEECCCceEEEEEEeCC-CeEEEEECcHHHHHHhCCCEEEEEECC
Confidence 975 4678999999999999999999854 489999999999999999998 79999999876 22445778999987
Q ss_pred CC
Q psy16562 361 EK 362 (445)
Q Consensus 361 ~~ 362 (445)
..
T Consensus 298 ~~ 299 (311)
T TIGR02376 298 AW 299 (311)
T ss_pred CC
Confidence 54
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=380.42 Aligned_cols=332 Identities=26% Similarity=0.374 Sum_probs=247.3
Q ss_pred ceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEE
Q psy16562 88 KGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 167 (445)
Q Consensus 88 ~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y 167 (445)
.++...++.....|.+||++|||+|++++||++.|+++|+|. ++|++||||+..++ .+||++..+|+++.||++++|
T Consensus 42 ~~~~~~~~~~~~~~~~~g~~~gP~i~~~~Gd~v~l~~~N~l~-~~t~vh~HG~~~p~--~~dG~~~~~~~~~~~~~~~~y 118 (451)
T COG2132 42 AQLAFAPGTGATVWGYNGALPGPTIRVKKGDTVTLDLTNRLL-VDTSVHWHGLPVPG--EMDGVPPLTQIPPGPGETPTY 118 (451)
T ss_pred cceeeecCCCceeEEecccccCceEEEecCCEEEEEEEeCCC-CCceEEEcCcccCc--cccCCCcccccCCCCCCcEEE
Confidence 345667788889999999999999999999999999999998 45999999988874 899999999999999999999
Q ss_pred EEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCe
Q psy16562 168 KFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDA 247 (445)
Q Consensus 168 ~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 247 (445)
.|+.+.+||||||+|.+.|+++||+|++||+++.+.. +++|. +.+++..+|....... +........+...+.
T Consensus 119 ~f~~~~~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~-----~~~d~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 191 (451)
T COG2132 119 TFTQDVPGTYWYHPHTHGQVYDGLAGALIIEDENSEP-----LGVDD-EPVILQDDWLDEDGTD-LYQEGPAMGGFPGDT 191 (451)
T ss_pred eecCCCCcceEeccCCCchhhcccceeEEEeCCCCCC-----CCCCc-eEEEEEeeeecCCCCc-cccCCccccCCCCCe
Confidence 9999988899999999889999999999999874432 36663 4455555566554443 322233446678899
Q ss_pred EEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEE
Q psy16562 248 ILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVD 327 (445)
Q Consensus 248 ~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~d 327 (445)
.+|||+..+ +...++.+||||++|++.. +.+++++.++.|+||++||.+++|..++.+.|+||||||
T Consensus 192 ~~vnG~~~p------------~~~~~~g~~rlRl~n~~~~-~~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p~er~~ 258 (451)
T COG2132 192 LLVNGAILP------------FKAVPGGVVRLRLLNAGNA-RTYHLALGGGPLTVIAVDGGPLPPVSVDELYLAPGERYE 258 (451)
T ss_pred EEECCCccc------------eeecCCCeEEEEEEecCCc-eEEEEEecCceEEEEEeCCcCcCceeeeeEEecCcceEE
Confidence 999997543 4444566799999999954 367888889999999999999999899999999999999
Q ss_pred EEEecCCCCceEEEEEEecCCCceeeEEE-----------EEcCCCCCCCCC----C-----------CC--CC---CCC
Q psy16562 328 VIIHTNQSNNLYWMQAKTLCDSITAEAVL-----------QYEGEKLTYVSK----R-----------PK--SD---SFP 376 (445)
Q Consensus 328 v~v~~~~~~G~y~~~~~~~~~~~~~~ail-----------~y~~~~~~~~~~----~-----------P~--~~---~~~ 376 (445)
+++++++ .+.+.+.+...+......+.. .+......+... . |. .. .+.
T Consensus 259 v~v~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (451)
T COG2132 259 VLVDMND-GGAVTLTALGEDMPDTLKGFRAPNPILTPSYPVLNGRVGAPTGDMADHAPVGLLVTILVEPGPNRDTDFHLI 337 (451)
T ss_pred EEEEcCC-CCeEEEEeccccCCceeeeeeccccccccccccccccccCCCcchhhccccccchhhcCCCcccccccchhh
Confidence 9999987 678888776521000001111 011100000000 0 00 00 000
Q ss_pred ---CCC-CCCCCCCCcc--ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC--CCeEEeEEEecC
Q psy16562 377 ---RGK-PKDNSPRVPM--HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV--EPLVVDSVTLFP 445 (445)
Q Consensus 377 ---~~~-~~~~~~~~~~--~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~--~p~~~Dtv~v~p 445 (445)
... -..++..++. ..+.++.|++++|++.|.+.+.||| ||||+.|+|++.|.... .+.|+||+.|.|
T Consensus 338 ~~~~~~~~~~n~~~~~~~~~~~~~~~G~~~~~~i~n~~~~~HP~--HlHg~~F~v~~~~~~~~~~~~~~kDTv~v~~ 412 (451)
T COG2132 338 GGIGGYVWAINGKAFDDNRVTLIAKAGTRERWVLTNDTPMPHPF--HLHGHFFQVLSGDAPAPGAAPGWKDTVLVAP 412 (451)
T ss_pred cccccccccccCccCCCCcCceeecCCCEEEEEEECCCCCccCe--EEcCceEEEEecCCCcccccCccceEEEeCC
Confidence 001 1123333332 3578999999999999999999998 99999999999992222 268999999976
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=258.31 Aligned_cols=109 Identities=47% Similarity=0.909 Sum_probs=102.0
Q ss_pred ecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEe
Q psy16562 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFP 170 (445)
Q Consensus 91 ~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~ 170 (445)
+..+|..+.+|+|||++|||+|+|++||+|+|+|.|+|. ++++|||||+++...+|+||+++++||+|+||++|+|+|+
T Consensus 7 ~~~~~~~~~~~~~ng~~pGPtI~v~~Gd~v~i~~~N~l~-~~~siH~HG~~~~~~~~~DG~~~~~~~~i~pG~~~~Y~~~ 85 (117)
T PF07732_consen 7 VSPDGGTRKVWTYNGQFPGPTIRVREGDTVRITVTNNLD-EPTSIHWHGLHQPPSPWMDGVPGVTQCPIAPGESFTYEFT 85 (117)
T ss_dssp EETTSTEEEEEEETTBSSEEEEEEETTEEEEEEEEEESS-SGBSEEEETSBSTTGGGGSGGTTTSGSSBSTTEEEEEEEE
T ss_pred EEeCCcEEEEEEECCCCCCCEEEEEcCCeeEEEEEeccc-cccccccceeeeeeeeecCCcccccceeEEeecceeeeEe
Confidence 445665699999999999999999999999999999997 8999999999999988999999999999999999999999
Q ss_pred cCC-CcceEEecccchhhhcCceeEEEEeCC
Q psy16562 171 AMP-SGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 171 ~~~-~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
+.+ +||||||||...|..+||+|+|||+++
T Consensus 86 ~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~~~ 116 (117)
T PF07732_consen 86 ANQQAGTYWYHSHVHGQQVMGLYGAIIVEPP 116 (117)
T ss_dssp ESSCSEEEEEEECSTTHHHTTEEEEEEEE-T
T ss_pred eeccccceeEeeCCCchhcCcCEEEEEEcCC
Confidence 997 999999999987888999999999976
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-26 Score=203.31 Aligned_cols=145 Identities=32% Similarity=0.544 Sum_probs=118.7
Q ss_pred ceEEEEeeeeccCCCCccCCCCCC-----CCCCCCCeEEEccccCCCCCC--CCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 216 SHVIIVTDWMHSMTDSKFPGNTYN-----DTRIKPDAILINGQNQNPKDN--SPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 216 e~~l~l~D~~~~~~~~~~~~~~~~-----~~~~~~~~~lING~~~~~~~~--~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
|++|+++||+++.....+...... .....+++++|||++...+.. ......+.+++++|++|||||||+++.
T Consensus 2 e~~i~l~DW~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~v~~g~~~rlRliNa~~~- 80 (159)
T PF00394_consen 2 EYVIMLSDWYHDDSDDLLQQYFAPGKGPMGMPPIPDSILINGKGRFDCSSADYTGGEPPVIKVKPGERYRLRLINAGAS- 80 (159)
T ss_dssp GGEEEEEEETSSCTTTHBH-HSSCHHHSHSCTSSCSEEEETTBTCBTTCTTGSTTSTSGEEEEETTTEEEEEEEEESSS-
T ss_pred eEEEEEeECCCCCHHHhhhhhccccccccCCCcCCcEEEECCccccccccccccccccceEEEcCCcEEEEEEEeccCC-
Confidence 799999999988776543322221 125789999999998764322 223557899999999999999999987
Q ss_pred eeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCC
Q psy16562 289 CPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGE 361 (445)
Q Consensus 289 ~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~ 361 (445)
+.+.|+|++|.|+|||+||.+++|..++++.|+|||||||+|++++++|+|||++... .....+.|+|+|.++
T Consensus 81 ~~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~G~R~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~~aiL~Y~~~ 159 (159)
T PF00394_consen 81 TSFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAPGQRYDVLVTADQPPGNYWIRASYQHDSINDPQNGNALAILRYDGA 159 (159)
T ss_dssp -BEEEEETTBCEEEEEETTEEEEEEEESBEEE-TTEEEEEEEEECSCSSEEEEEEEESSSSSHSHGGGTTEEEEEETTS
T ss_pred eeEEEEeeccceeEeeeccccccccccceEEeeCCeEEEEEEEeCCCCCeEEEEEecccCCCccCCCcEEEEEEEECCC
Confidence 4899999999999999999999999999999999999999999998789999999532 256778999999863
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-22 Score=212.25 Aligned_cols=183 Identities=17% Similarity=0.199 Sum_probs=137.6
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|.|++++||++++++.|.... .++||||++.+.. .||. .. +++
T Consensus 43 G~~r~~~~iNGq----------~PGP~I~~~~GD~v~V~v~N~l~~----~ttiHWHGi~q~~~~~~DGv----~~-TQc 103 (552)
T PLN02354 43 GVPQQVILINGQ----------FPGPNINSTSNNNIVINVFNNLDE----PFLLTWSGIQQRKNSWQDGV----PG-TNC 103 (552)
T ss_pred CeEEEEEEECCC----------CcCCcEEEeCCCEEEEEEEECCCC----CcccccccccCCCCcccCCC----cC-CcC
Confidence 345678999999 889999999999999999999854 4569999999865 5994 23 899
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--C------------C----CC
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--S------------F----PR 377 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~------------~----~~ 377 (445)
+|.||++|.|.|++.+++|+||||+|.. ++++.+..||+-......+.. .++.+ . + ..
T Consensus 104 pI~PG~sf~Y~F~~~~q~GT~WYHsH~~~Q~~~Gl~G~lII~~~~~~~~p~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 182 (552)
T PLN02354 104 PIPPGTNFTYHFQPKDQIGSYFYYPSTGMHRAAGGFGGLRVNSRLLIPVPYA-DPEDDYTVLIGDWYTKSHTALKKFLDS 182 (552)
T ss_pred CCCCCCcEEEEEEeCCCCcceEEecCccceecCCccceEEEcCCcCCCCCCC-CcCceEEEEeeeeccCCHHHHHHHHhc
Confidence 9999999999999864489999999987 577877777653221111100 00000 0 0 00
Q ss_pred C-------CCCCCCCC-----CccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 G-------KPKDNSPR-----VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ~-------~~~~~~~~-----~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+ ....|+.. .....++|++||+|||||||++... .+.|+|+||+|+||+.||.+++|..+|++.|+|
T Consensus 183 g~~~~~~d~~liNG~~~~~~~~~~~~~~v~~Gk~yRlRiINa~~~~-~~~f~IdgH~~tVIa~DG~~v~p~~~~~l~i~~ 261 (552)
T PLN02354 183 GRTLGRPDGVLINGKSGKGDGKDEPLFTMKPGKTYRYRICNVGLKS-SLNFRIQGHKMKLVEMEGSHVLQNDYDSLDVHV 261 (552)
T ss_pred CCCCCCCCeEEEeCCcCCCCCCCceEEEECCCCEEEEEEEecCCCc-eEEEEECCceEEEEEeCCcccCCcceeEEEEcc
Confidence 0 00112221 1123689999999999999999988 799999999999999999999999999999875
|
|
| >PLN02168 copper ion binding / pectinesterase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-22 Score=209.24 Aligned_cols=183 Identities=17% Similarity=0.219 Sum_probs=138.3
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc---CCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---DGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|.|++++||++++++.|...+ ..+||||++.+... ||++ . +++
T Consensus 42 G~~~~~~~vNG~----------~PGP~I~~~~GD~v~V~v~N~L~~----~ttiHWHGl~~~~~~~~DGv~----g-tQc 102 (545)
T PLN02168 42 GGNKQVIVINDM----------FPGPLLNATANDVINVNIFNNLTE----PFLMTWNGLQLRKNSWQDGVR----G-TNC 102 (545)
T ss_pred CeEEEEEEECCc----------CCCCcEEEECCCEEEEEEEeCCCC----CccEeeCCccCCCCCCcCCCC----C-CcC
Confidence 445678999999 889999999999999999999965 35689999999755 9943 3 789
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--CC----------------CC
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--SF----------------PR 377 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~~----------------~~ 377 (445)
+|.||++|.|.|++++++|+||||+|.. ++++.+..|++-......+.. .++.+ .+ ..
T Consensus 103 pI~PG~sftY~F~~~~q~GT~WYHsH~~~Q~~~GL~G~lII~~~~~~~~p~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 181 (545)
T PLN02168 103 PILPGTNWTYRFQVKDQIGSYFYFPSLLLQKAAGGYGAIRIYNPELVPVPFP-KPDEEYDILIGDWFYADHTVMRASLDN 181 (545)
T ss_pred CCCCCCcEEEEEEeCCCCceEEEecChhhhhhCcceeEEEEcCCcccCcCcC-cccceeeEEEEecCCCCHHHHHhhhhc
Confidence 9999999999999964489999999987 578888877754322111100 00000 00 00
Q ss_pred CC-------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 GK-------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ~~-------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+. ...|+.......+++++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 182 g~~~~~~d~~liNG~~~~~~~~~v~~G~~yRlRiiNa~~~~-~~~~~IdgH~~tVIa~DG~~v~p~~~~~l~i~~ 255 (545)
T PLN02168 182 GHSLPNPDGILFNGRGPEETFFAFEPGKTYRLRISNVGLKT-CLNFRIQDHDMLLVETEGTYVQKRVYSSLDIHV 255 (545)
T ss_pred CCCCCCCCEEEEeccCCCcceEEeCCCCEEEEEEEeccCCc-eEEEEECCcEEEEEEECCeECCCceeeEEEEcC
Confidence 00 01122211123689999999999999999887 688999999999999999999999999999876
|
|
| >PLN02835 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9e-22 Score=207.62 Aligned_cols=180 Identities=18% Similarity=0.220 Sum_probs=136.6
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~ 319 (445)
.....++|||+ .|+|+|++++||++++++.|...+ ..+||||++.+.. .||++ . ++++
T Consensus 46 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~v~v~N~L~~----~ttiHWHGl~~~~~~~~DGv~----~-tQ~p 106 (539)
T PLN02835 46 VPQQVILINGQ----------FPGPRLDVVTNDNIILNLINKLDQ----PFLLTWNGIKQRKNSWQDGVL----G-TNCP 106 (539)
T ss_pred eEEEEEEECCc----------CCCCCEEEECCCEEEEEEEeCCCC----CCcEEeCCcccCCCCCCCCCc----c-CcCC
Confidence 45678999999 889999999999999999999865 3459999999974 59952 2 6899
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--CCC----------------CC
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--SFP----------------RG 378 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~----------------~~ 378 (445)
|.||++|+|.|++.+++|+||||+|.. ++++.+..||+-......+. ..++.+ .++ .+
T Consensus 107 I~PG~sf~Y~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~-~~~d~e~~l~l~Dw~~~~~~~~~~~~~~g 185 (539)
T PLN02835 107 IPPNSNYTYKFQTKDQIGTFTYFPSTLFHKAAGGFGAINVYERPRIPIPF-PLPDGDFTLLVGDWYKTSHKTLQQRLDSG 185 (539)
T ss_pred CCCCCcEEEEEEECCCCEeEEEEeCccchhcCcccceeEEeCCCCCCcCC-CCCCceEEEEeeccccCCHHHHHHHhhcC
Confidence 999999999999754589999999976 57788887775322211110 001110 000 00
Q ss_pred C-------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 379 K-------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 379 ~-------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
. ...|+... ..+++++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 186 ~~~~~~d~~liNG~~~--~~~~v~~G~~yRlRliNa~~~~-~~~f~i~gH~~~VI~~DG~~v~p~~~~~l~i~~ 256 (539)
T PLN02835 186 KVLPFPDGVLINGQTQ--STFSGDQGKTYMFRISNVGLST-SLNFRIQGHTMKLVEVEGSHTIQNIYDSLDVHV 256 (539)
T ss_pred CCCCCCceEEEccccC--ceEEECCCCEEEEEEEEcCCCc-cEEEEECCCEEEEEEECCccCCCceeeEEEECc
Confidence 0 01122211 2588999999999999999887 799999999999999999999999999999875
|
|
| >PLN02792 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-22 Score=208.20 Aligned_cols=183 Identities=19% Similarity=0.213 Sum_probs=137.2
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|+|++++||++++++.|...+ .++||||++.+.. .||++ .+++
T Consensus 32 g~~~~~~~vNGq----------~PGP~I~~~~GD~v~V~v~N~L~~----~ttiHWHGl~q~~~~~~DGv~-----~tqc 92 (536)
T PLN02792 32 TLPRRGILINGQ----------FPGPEIRSLTNDNLVINVHNDLDE----PFLLSWNGVHMRKNSYQDGVY-----GTTC 92 (536)
T ss_pred CeEEEEEEECCC----------CCCCcEEEECCCEEEEEEEeCCCC----CcCEeCCCcccCCCCccCCCC-----CCcC
Confidence 345678999999 889999999999999999999865 4469999999976 69942 2679
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--C----------------CCC
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--S----------------FPR 377 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~----------------~~~ 377 (445)
+|.||++|.|.|++++++|+||||+|.. ++++.+..||+-......+.. .++.+ . +..
T Consensus 93 PI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~liI~~~~~~~~p~~-~~d~e~~i~l~Dw~~~~~~~~~~~~~~ 171 (536)
T PLN02792 93 PIPPGKNYTYDFQVKDQVGSYFYFPSLAVQKAAGGYGSLRIYSLPRIPVPFP-EPAGDFTFLIGDWYRRNHTTLKKILDG 171 (536)
T ss_pred ccCCCCcEEEEEEeCCCccceEEecCcchhhhcccccceEEeCCcccCcCCC-cccceeEEEecccccCCHHHHHHHhhc
Confidence 9999999999999964489999999987 467777766654222111100 01100 0 000
Q ss_pred CC--C------CCCCCCC-ccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 GK--P------KDNSPRV-PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ~~--~------~~~~~~~-~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+. . ..|+... ....++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 172 g~~~~~~~d~~liNG~~~~~~~~~~v~~Gk~yRlRliNa~~~~-~~~f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~ 247 (536)
T PLN02792 172 GRKLPLMPDGVMINGQGVSYVYSITVDKGKTYRFRISNVGLQT-SLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHV 247 (536)
T ss_pred cCcCCCCCCEEEEeccCCCCcceEEECCCCEEEEEEEEcCCCc-eEEEEECCcEEEEEEeCCccCCCcceeEEEEcc
Confidence 00 0 0122211 123589999999999999999887 789999999999999999999999999999876
|
|
| >PLN00044 multi-copper oxidase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=207.61 Aligned_cols=181 Identities=15% Similarity=0.156 Sum_probs=136.0
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~I~ 321 (445)
...++|||+ +|+|+|++++||++++++.|.... .++||||++.+.. .||+ | .++++|.
T Consensus 48 ~~vi~vNGq----------~PGPtI~~~~GD~v~V~V~N~L~~----~ttIHWHGl~q~~t~w~DGv---~--~TQcPI~ 108 (596)
T PLN00044 48 QEAIGINGQ----------FPGPALNVTTNWNLVVNVRNALDE----PLLLTWHGVQQRKSAWQDGV---G--GTNCAIP 108 (596)
T ss_pred eEEEEEcCc----------CCCCcEEEECCCEEEEEEEeCCCC----CccEEECCccCCCCccccCC---C--CCcCCcC
Confidence 367999999 889999999999999999999864 4569999998864 5994 2 2789999
Q ss_pred CCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC-----CC----CCC-----------------
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS-----KR----PKS----------------- 372 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~-----~~----P~~----------------- 372 (445)
||++|+|.|++++++|+||||+|.. ++++.+..||+-......+.. .. -+|
T Consensus 109 PG~sftY~F~~~dq~GT~WYHsH~~~Q~~~Gl~GalII~~~~~~~~P~~~~~~~e~~i~l~DW~~~~~~~~~~~l~~g~~ 188 (596)
T PLN00044 109 AGWNWTYQFQVKDQVGSFFYAPSTALHRAAGGYGAITINNRDVIPIPFGFPDGGDITLFIADWYARDHRALRRALDAGDL 188 (596)
T ss_pred CCCcEEEEEEeCCCCceeEeeccchhhhhCcCeeEEEEcCcccccccccCCcccceEEEecccccCCHHHHHHHHhcCCC
Confidence 9999999999965589999999987 577888766654321111100 00 000
Q ss_pred ----C-CCCCCCCC--CCC----CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEE
Q psy16562 373 ----D-SFPRGKPK--DNS----PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 441 (445)
Q Consensus 373 ----~-~~~~~~~~--~~~----~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv 441 (445)
+ .+.++... .+. .......++|++|++|||||||++... .+.|+|+||+|+||+.||.+++|..+|.|
T Consensus 189 ~~~~d~~lING~g~~~~n~~~~~~~~~~~~i~V~~Gk~yRlRiINaa~~~-~~~fsIdgH~mtVIa~DG~~v~P~~vd~i 267 (596)
T PLN00044 189 LGAPDGVLINAFGPYQYNDSLVPPGITYERINVDPGKTYRFRVHNVGVAT-SLNFRIQGHNLLLVEAEGSYTSQQNYTNL 267 (596)
T ss_pred CCCCCceEEcccCccccCCccccCCCccceEEECCCCEEEEEEEEccCCc-eEEEEECCCEEEEEEeCCcccCceeeeeE
Confidence 0 00111100 000 011223689999999999999999887 79999999999999999999999999999
Q ss_pred EecC
Q psy16562 442 TLFP 445 (445)
Q Consensus 442 ~v~p 445 (445)
.|.|
T Consensus 268 ~I~~ 271 (596)
T PLN00044 268 DIHV 271 (596)
T ss_pred EEcC
Confidence 9976
|
|
| >TIGR03389 laccase laccase, plant | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=206.87 Aligned_cols=185 Identities=17% Similarity=0.233 Sum_probs=137.6
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
|.....++|||+ .|+|.|++++||++++++.|.... ..+||||++.+.. .||. ..++++
T Consensus 19 G~~~~~~~~NG~----------~PGP~i~~~~GD~v~v~v~N~l~~----~tsiHwHGl~q~~~~~~DGv----~~vTq~ 80 (539)
T TIGR03389 19 CSTKSILTVNGK----------FPGPTLYAREGDTVIVNVTNNVQY----NVTIHWHGVRQLRNGWADGP----AYITQC 80 (539)
T ss_pred CcEeEEEEECCc----------ccCCEEEEEcCCEEEEEEEeCCCC----CeeEecCCCCCCCCCCCCCC----cccccC
Confidence 456678999999 789999999999999999999865 3569999999875 4994 468999
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCCCCCCCC----C----CCCCCC----------CCCC
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGEKLTYVS----K----RPKSDS----------FPRG 378 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~~~~~~~----~----~P~~~~----------~~~~ 378 (445)
+|.||+++.|.|++.+++|+||||+|.. ..++.+..||+-......+.. . +-++.. ...+
T Consensus 81 pI~PG~s~~Y~f~~~~~~GT~WYHsH~~~~~~Gl~G~lIV~~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (539)
T TIGR03389 81 PIQPGQSYVYNFTITGQRGTLWWHAHISWLRATVYGAIVILPKPGVPYPFPKPDREVPIILGEWWNADVEAVINQANQTG 160 (539)
T ss_pred CcCCCCeEEEEEEecCCCeeEEEecCchhhhccceEEEEEcCCCCCCCCCCCCCceEEEEecccccCCHHHHHHHHHhcC
Confidence 9999999999999965589999999987 355666655553222111100 0 001100 0000
Q ss_pred -------CCCCCCCC--------CccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEe
Q psy16562 379 -------KPKDNSPR--------VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTL 443 (445)
Q Consensus 379 -------~~~~~~~~--------~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v 443 (445)
....|++. .....++|++|++|||||||++... ++.|||+||.|+||++||.+++|..+|+|.|
T Consensus 161 ~~~~~~d~~liNG~~~~~~~~~~~~~~~i~v~~G~~~RlRlINa~~~~-~~~~~idgH~~~VIa~DG~~~~P~~~~~l~i 239 (539)
T TIGR03389 161 GAPNVSDAYTINGHPGPLYNCSSKDTFKLTVEPGKTYLLRIINAALND-ELFFAIANHTLTVVEVDATYTKPFKTKTIVI 239 (539)
T ss_pred CCCCccceEEECCCcCCCCCCCCCCceEEEECCCCEEEEEEEeccCCc-eEEEEECCCeEEEEEeCCcccCceEeCeEEe
Confidence 00112221 1123689999999999999998876 7889999999999999999999999999999
Q ss_pred cC
Q psy16562 444 FP 445 (445)
Q Consensus 444 ~p 445 (445)
+|
T Consensus 240 ~~ 241 (539)
T TIGR03389 240 GP 241 (539)
T ss_pred cC
Confidence 76
|
Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| >PLN02991 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.7e-22 Score=206.70 Aligned_cols=182 Identities=15% Similarity=0.166 Sum_probs=137.0
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|.|++++||++++++.|.... ..+||||++.+.. .||++ . +++
T Consensus 44 G~~r~~~~vNG~----------~PGP~I~~~~GD~v~V~V~N~L~~----~ttiHWHGi~q~~~~~~DGv~---~--tQc 104 (543)
T PLN02991 44 GVAQQGILINGK----------FPGPDIISVTNDNLIINVFNHLDE----PFLISWSGIRNWRNSYQDGVY---G--TTC 104 (543)
T ss_pred CEEEEEEEEcCC----------CCCCcEEEECCCEEEEEecCCCCC----CccEEECCcccCCCccccCCC---C--CCC
Confidence 445678999999 889999999999999999999864 4569999999853 59952 2 689
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--CCC----------------C
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--SFP----------------R 377 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~----------------~ 377 (445)
+|.||++|.|.|++++++|+||||+|.. ++++.+..|++-......+.. .++.+ .++ .
T Consensus 105 pI~PG~sftY~F~~~~q~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~-~~d~d~~i~l~DW~~~~~~~~~~~~~~ 183 (543)
T PLN02991 105 PIPPGKNYTYALQVKDQIGSFYYFPSLGFHKAAGGFGAIRISSRPLIPVPFP-APADDYTVLIGDWYKTNHKDLRAQLDN 183 (543)
T ss_pred ccCCCCcEEEEEEeCCCCcceEEecCcchhhhCCCeeeEEEeCCcccCcccc-cccceeEEEecceecCCHHHHHHHhhc
Confidence 9999999999999964489999999986 467777766653321111110 01100 000 0
Q ss_pred CC-------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 GK-------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ~~-------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+. ...|++.. ...++|++|++|||||||++... .|.|+|+||.|+||+.||.+++|..+|++.|+|
T Consensus 184 ~~~~~~~d~~liNG~~~-~~~~~v~~G~~yRlRiINa~~~~-~~~~~idgH~~tVIa~DG~~~~p~~~~~l~i~~ 256 (543)
T PLN02991 184 GGKLPLPDGILINGRGS-GATLNIEPGKTYRLRISNVGLQN-SLNFRIQNHTMKLVEVEGTHTIQTPFSSLDVHV 256 (543)
T ss_pred CCCCCCCCEEEEccCCC-CceEEECCCCEEEEEEEeccCCe-eEEEEECCCEEEEEEeCCccccceeeeEEEEcC
Confidence 00 01122211 13689999999999999999987 589999999999999999999999999999876
|
|
| >PLN02191 L-ascorbate oxidase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-21 Score=204.32 Aligned_cols=184 Identities=15% Similarity=0.276 Sum_probs=137.8
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|.|++++|+++++++.|..... ..+||||++.+.. .||+ ..++++
T Consensus 39 G~~~~v~~vNg~----------~pGP~i~~~~Gd~v~v~v~N~l~~~---~tsiHwHGl~~~~~~~~DGv----~gvtq~ 101 (574)
T PLN02191 39 CKEGAVMTVNGQ----------FPGPTIDAVAGDTIVVHLTNKLTTE---GLVIHWHGIRQKGSPWADGA----AGVTQC 101 (574)
T ss_pred CceeeEEEECCc----------CCCCeEEEEcCCEEEEEEEECCCCC---CccEECCCCCCCCCccccCC----CccccC
Confidence 345679999999 7889999999999999999997532 3569999998865 4884 347889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCC---------------C-------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYV---------------S------------- 367 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~---------------~------------- 367 (445)
+|.||+++.|.|+++| +|+||||+|.. .+++.+..|++-......+. .
T Consensus 102 pI~PG~s~~Y~f~~~~-~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 180 (574)
T PLN02191 102 AINPGETFTYKFTVEK-PGTHFYHGHYGMQRSAGLYGSLIVDVAKGPKERLRYDGEFNLLLSDWWHESIPSQELGLSSKP 180 (574)
T ss_pred CcCCCCeEEEEEECCC-CeEEEEeeCcHHHHhCCCEEEEEEccCCCCCCCCCCCeeEEEeeeccccCChHHHHHhhccCC
Confidence 9999999999999987 89999999987 57788887775211111000 0
Q ss_pred ----CCCCCCCCCCCCC-CCCC--------C-----------CCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeE
Q psy16562 368 ----KRPKSDSFPRGKP-KDNS--------P-----------RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQL 423 (445)
Q Consensus 368 ----~~P~~~~~~~~~~-~~~~--------~-----------~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f 423 (445)
..|+. .+.+++. ..+. . ......++|++|++|||||||++... .|.|+|+||.|
T Consensus 181 ~~~~~~~d~-~liNG~g~~~~~~~~~~~~~~~~~~~~~~~n~~~~p~~~~v~~G~~yRlRiINa~~~~-~~~~~idgH~~ 258 (574)
T PLN02191 181 MRWIGEAQS-ILINGRGQFNCSLAAQFSNGTELPMCTFKEGDQCAPQTLRVEPNKTYRIRLASTTALA-SLNLAVQGHKL 258 (574)
T ss_pred CCcCCCCCc-eEECCCCCCCCcccccccCCcccccceeccCCCCCceEEEEcCCCEEEEEEEecCCce-eEEEEECCCeE
Confidence 00110 1111111 1000 0 00112589999999999999999887 79999999999
Q ss_pred EEEecCCccCCCeEEeEEEecC
Q psy16562 424 QVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 424 ~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+||+.||.+++|..+|+|.|+|
T Consensus 259 tVIa~DG~~v~P~~v~~l~i~~ 280 (574)
T PLN02191 259 VVVEADGNYITPFTTDDIDIYS 280 (574)
T ss_pred EEEEcCCeeccceEeeeEEEcC
Confidence 9999999999999999999876
|
|
| >TIGR03388 ascorbase L-ascorbate oxidase, plant type | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.9e-21 Score=201.58 Aligned_cols=185 Identities=23% Similarity=0.346 Sum_probs=136.8
Q ss_pred CCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecE
Q psy16562 241 TRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDS 317 (445)
Q Consensus 241 ~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~ 317 (445)
.|.....++|||+ .|+|.|++++|++++++|.|..... ..+||||++.+.. .||.+ .+++
T Consensus 16 dG~~~~~~~~Ng~----------~pGP~i~~~~Gd~v~v~v~N~l~~~---~t~iHwHGl~~~~~~~~DG~~----~vtq 78 (541)
T TIGR03388 16 DCFEKLVIGINGQ----------FPGPTIRAQAGDTIVVELTNKLHTE---GVVIHWHGIRQIGTPWADGTA----GVTQ 78 (541)
T ss_pred CCeEeeEEEECCc----------CCCCeEEEEcCCEEEEEEEECCCCC---CccEEecCcCCcCCcccCCCC----cccc
Confidence 3456678999999 7789999999999999999997531 3458888888754 48843 3688
Q ss_pred EEecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC-------------------------C-
Q psy16562 318 VTLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS-------------------------K- 368 (445)
Q Consensus 318 ~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~-------------------------~- 368 (445)
+.|.||+++.|.|++++ +|+||||+|.. .+++.+..|++-......+.. .
T Consensus 79 ~~I~PG~s~~y~f~~~~-~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 157 (541)
T TIGR03388 79 CAINPGETFIYNFVVDR-PGTYFYHGHYGMQRSAGLYGSLIVDVPDGEKEPFHYDGEFNLLLSDWWHKSIHEQEVGLSSK 157 (541)
T ss_pred CCcCCCCEEEEEEEcCC-CEEEEEEecchHHhhccceEEEEEecCCCCCCCccccceEEEEeecccCCCHHHHHhhcccC
Confidence 99999999999999987 89999999976 477888777764321110000 0
Q ss_pred ------CCCCCCCCCCCC-CCCC------------------CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeE
Q psy16562 369 ------RPKSDSFPRGKP-KDNS------------------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQL 423 (445)
Q Consensus 369 ------~P~~~~~~~~~~-~~~~------------------~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f 423 (445)
.|+. .+.+++. ..+. .......++|++|++|||||||++... .+.|+|++|.|
T Consensus 158 ~~~~~~~~d~-~liNG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~id~h~~ 235 (541)
T TIGR03388 158 PMRWIGEPQS-LLINGRGQFNCSLAAKFSSTNLPQCNLKGNEQCAPQILHVEPGKTYRLRIASTTALA-ALNFAIEGHKL 235 (541)
T ss_pred CCcCCCCCcc-eEECCCCCCCCccccccCccccchhhccCCCCCCceEEEECCCCEEEEEEEcccccc-eEEEEECCCEE
Confidence 0000 0111111 1000 001112488999999999999998877 79999999999
Q ss_pred EEEecCCccCCCeEEeEEEecC
Q psy16562 424 QVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 424 ~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+||+.||.+++|..+|.|.|+|
T Consensus 236 ~VIa~DG~~v~P~~v~~l~i~~ 257 (541)
T TIGR03388 236 TVVEADGNYVEPFTVKDIDIYS 257 (541)
T ss_pred EEEEeCCEecccceeCeEEecC
Confidence 9999999999999999999876
|
Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-21 Score=201.84 Aligned_cols=184 Identities=24% Similarity=0.330 Sum_probs=135.8
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
|.....++|||+ .|+|.|+++.|++++++|.|..... ..+||+|++.+.. .||. ..++++
T Consensus 40 G~~r~~~~~Ng~----------~pgP~i~~~~Gd~v~v~v~N~l~~~---~~~iH~HG~~~~~~~~~DG~----~~~tq~ 102 (566)
T PLN02604 40 CFKKLVITINGR----------SPGPTILAQQGDTVIVELKNSLLTE---NVAIHWHGIRQIGTPWFDGT----EGVTQC 102 (566)
T ss_pred CceeeEEEECCc----------cCCCcEEEECCCEEEEEEEeCCCCC---CCCEEeCCCCCCCCccccCC----CccccC
Confidence 456678999999 6789999999999999999997421 2347888887654 4884 346889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC-------------------------C--
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS-------------------------K-- 368 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~-------------------------~-- 368 (445)
.|.||+++.|.|++++ +|+||||+|.. .+++.+..|++-......+.. .
T Consensus 103 ~i~pg~s~~y~f~~~~-~Gt~wyH~H~~~q~~~Gl~G~liV~~~~~~~~p~~~d~d~~l~l~Dw~~~~~~~~~~~~~~~~ 181 (566)
T PLN02604 103 PILPGETFTYEFVVDR-PGTYLYHAHYGMQREAGLYGSIRVSLPRGKSEPFSYDYDRSIILTDWYHKSTYEQALGLSSIP 181 (566)
T ss_pred ccCCCCeEEEEEEcCC-CEEEEEeeCcHHHHhCCCeEEEEEEecCCCCCccccCcceEEEeeccccCCHHHHHHhhccCC
Confidence 9999999999999986 89999999987 477877777764321110000 0
Q ss_pred -----CCCCCCCCCCCC-CCCC----------------CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEE
Q psy16562 369 -----RPKSDSFPRGKP-KDNS----------------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 426 (445)
Q Consensus 369 -----~P~~~~~~~~~~-~~~~----------------~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi 426 (445)
.|+. .+.+++. ..+. .......+++++|++|||||||++... .+.|+|++|.|+||
T Consensus 182 ~~~~~~~d~-~liNG~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~RlRlINa~~~~-~~~~sidgH~~~VI 259 (566)
T PLN02604 182 FDWVGEPQS-LLIQGKGRYNCSLVSSPYLKAGVCNATNPECSPYVLTVVPGKTYRLRISSLTALS-ALSFQIEGHNMTVV 259 (566)
T ss_pred CccCCCCCc-eEEcCCCCCCCccccCccccccccccCCCCCCceEEEecCCCEEEEEEEeccccc-eEEEEECCCEEEEE
Confidence 0010 0111111 1000 001223588999999999999999887 89999999999999
Q ss_pred ecCCccCCCeEEeEEEecC
Q psy16562 427 ASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 427 ~~dG~~~~p~~~Dtv~v~p 445 (445)
+.||.+++|..+|.|.|+|
T Consensus 260 a~DG~~v~P~~v~~l~l~~ 278 (566)
T PLN02604 260 EADGHYVEPFVVKNLFIYS 278 (566)
T ss_pred EeCCEecccceeeeEEEcc
Confidence 9999999999999999875
|
|
| >TIGR03390 ascorbOXfungal L-ascorbate oxidase, fungal type | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=198.28 Aligned_cols=186 Identities=19% Similarity=0.270 Sum_probs=134.5
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|+|++++|+++++++.|..... ..+||||++.+.. .||++ .++++
T Consensus 24 g~~r~~~~~NG~----------~PGP~I~~~~GD~v~V~v~N~L~~~---~ttiHwHGi~~~~~~~~DGvp----~vTQc 86 (538)
T TIGR03390 24 CSSRYSVVVNGT----------SPGPEIRLQEGQTTWIRVYNDIPDN---NVTMHWHGLTQRTAPFSDGTP----LASQW 86 (538)
T ss_pred CeEEEEEEECCc----------CCCCeEEEeCCCEEEEEEEECCCCC---CceEECCCCCCCCCCCCCCCc----ccccC
Confidence 334578999999 8899999999999999999998532 3569999998754 59954 47899
Q ss_pred EecCCceEEEEEecC-CCCceEEEEEEec--CCCceeeEEEEEcCCCCCCC-CC----CCCC------------------
Q psy16562 319 TLFPGDRVDVIIHTN-QSNNLYWMQAKTL--CDSITAEAVLQYEGEKLTYV-SK----RPKS------------------ 372 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~-~~~G~y~~~~~~~--~~~~~~~ail~y~~~~~~~~-~~----~P~~------------------ 372 (445)
+|.||+.|+|.|+++ +++|+||||+|.. ..++.+..||+-........ .. +-++
T Consensus 87 pI~PG~sf~Y~f~~~~~q~GT~WYHsH~~~Q~~~l~G~lIV~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~ 166 (538)
T TIGR03390 87 PIPPGHFFDYEIKPEPGDAGSYFYHSHVGFQAVTAFGPLIVEDCEPPPYKYDDERILLVSDFFSATDEEIEQGLLSTPFT 166 (538)
T ss_pred CCCCCCcEEEEEEecCCCCeeeEEecCCchhhhcceeEEEEccCCccCCCccCcEEEEEeCCCCCCHHHHHhhhhccCCc
Confidence 999999999999975 3589999999986 23366665554221110000 00 0000
Q ss_pred -----C-CCCCCCCC-CC------C-CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCee-EEEEecCCccCCCeE
Q psy16562 373 -----D-SFPRGKPK-DN------S-PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQ-LQVIASDGTAVEPLV 437 (445)
Q Consensus 373 -----~-~~~~~~~~-~~------~-~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~-f~Vi~~dG~~~~p~~ 437 (445)
+ .+.+++.. .. . .......++|++|++|||||||++... .+.|+|++|. |+||++||.+++|..
T Consensus 167 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~-~~~~~idgH~~~~VIa~DG~~~~P~~ 245 (538)
T TIGR03390 167 WSGETEAVLLNGKSGNKSFYAQINPSGSCMLPVIDVEPGKTYRLRFIGATALS-LISLGIEDHENLTIIEADGSYTKPAK 245 (538)
T ss_pred cCCCCceEEECCccccccccccccCCCCCcceEEEECCCCEEEEEEEccCCce-EEEEEECCCCeEEEEEeCCCCCCceE
Confidence 0 01111110 00 0 001124689999999999999999887 7899999999 999999999999999
Q ss_pred EeEEEecC
Q psy16562 438 VDSVTLFP 445 (445)
Q Consensus 438 ~Dtv~v~p 445 (445)
+|+|.|+|
T Consensus 246 v~~l~l~~ 253 (538)
T TIGR03390 246 IDHLQLGG 253 (538)
T ss_pred eCeEEEcc
Confidence 99999876
|
This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. |
| >KOG1263|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-20 Score=193.04 Aligned_cols=181 Identities=20% Similarity=0.334 Sum_probs=136.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc---CCCcceeeEecEEEe
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---DGTAVEPLVVDSVTL 320 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~~~~~I 320 (445)
....++|||+ +|+|.|.++.|+++.++++|.... .++||||++.+... ||. .+++|+|
T Consensus 46 ~~~vi~iNG~----------fPGP~I~~~~gD~ivV~v~N~~~~----~~sihWhGv~q~kn~w~DG~-----~~TqCPI 106 (563)
T KOG1263|consen 46 EKQVITINGQ----------FPGPTINAEEGDTIVVNVVNRLDE----PFSIHWHGVRQRKNPWQDGV-----YITQCPI 106 (563)
T ss_pred cceeEeecCC----------CCCCeEEEEeCCEEEEEEEeCCCC----ceEEEeccccccCCccccCC-----ccccCCc
Confidence 5578999999 889999999999999999999753 56799999888753 992 3699999
Q ss_pred cCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCCC--CC--------------------
Q psy16562 321 FPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKSD--SF-------------------- 375 (445)
Q Consensus 321 ~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~~--~~-------------------- 375 (445)
.|||.|.|.|++++..|+||||+|.. +.+..+..++.-......+. +.|+-+ .+
T Consensus 107 ~Pg~~~tY~F~v~~q~GT~~yh~h~~~~Ra~G~~G~liI~~~~~~p~pf-~~pd~E~~ill~dW~~~~~~~~l~~~~~~~ 185 (563)
T KOG1263|consen 107 QPGENFTYRFTVKDQIGTLWYHSHVSWQRATGVFGALIINPRPGLPVPF-PKPDKEFTILLGDWYKNLNHKNLKNFLDRT 185 (563)
T ss_pred CCCCeEEEEEEeCCcceeEEEeeccccccccCceeEEEEcCCccCCCCC-CCCCceeEEEeEeeccccCHHHHHHhhccC
Confidence 99999999999997789999999998 34455554443332211111 112111 00
Q ss_pred ---CC--CCCCCCCCCCc----cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 376 ---PR--GKPKDNSPRVP----MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 376 ---~~--~~~~~~~~~~~----~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+. +....|+.... ...+++++||+|+|||+|++... .+.|.|.+|+|+||++||.+++|...|++.|.|
T Consensus 186 ~~~p~~~D~~~iNg~~g~~~~~~~~l~v~pGktY~lRiiN~g~~~-~l~F~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~ 263 (563)
T KOG1263|consen 186 GALPNPSDGVLINGRSGFLYNCTPTLTVEPGKTYRLRIINAGLNT-SLNFSIANHQLTVVEVDGAYTKPFTTDSLDIHP 263 (563)
T ss_pred CCCCCCCCceEECCCCCcccCceeEEEEcCCCEEEEEEEcccccc-ceEEEECCeEEEEEEecceEEeeeeeceEEEcC
Confidence 00 00011222211 14689999999999999999887 466999999999999999999999999999876
|
|
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-20 Score=162.42 Aligned_cols=106 Identities=19% Similarity=0.290 Sum_probs=85.6
Q ss_pred cCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCC--CCCceEeeCCcccCCCCCCCCCCcccccCCCCC---C-c-
Q psy16562 92 TADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI--DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSS---T-T- 164 (445)
Q Consensus 92 ~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~--~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG---~-~- 164 (445)
.+++....-+.++| ++||+|++++||+|+|+|.|.+. .....||+||...+..+.|||++.++||+|.|+ . .
T Consensus 35 ~~~~~~~~~f~~~~-~~~P~I~v~~Gd~V~v~v~N~~~~~~H~~~I~~~g~~~~~~p~mdG~~~~~~~~i~p~~~~g~~~ 113 (148)
T TIGR03095 35 PMPGPSMYSFEIHD-LKNPTIVIPEGVTVHFTVINTDTDSGHNFDISKRGPPYPYMPGMDGLGFVAGTGFLPPPKSGKFG 113 (148)
T ss_pred cCCCCCceeEEecC-CCCCEEEEcCCCEEEEEEEeCCCCccccEEeecCCCccccccccCCCCccccCcccCCCCCCccc
Confidence 44566666778888 77999999999999999999964 245667777766555556999999999999884 1 1
Q ss_pred -eEEEEecCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 165 -FRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 -~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.++.|+++++||||||||...|+.+||+|+|||+
T Consensus 114 ~~~~tf~f~~aGtywyhC~~pgH~~~GM~G~iiV~ 148 (148)
T TIGR03095 114 YTDFTYHFSTAGTYWYLCTYPGHAENGMYGKIVVK 148 (148)
T ss_pred eeEEEEECCCCeEEEEEcCChhHHHCCCEEEEEEC
Confidence 2455666699999999999999999999999995
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR01480 copper_res_A copper-resistance protein, CopA family | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=190.90 Aligned_cols=182 Identities=19% Similarity=0.237 Sum_probs=132.9
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....++|||+ .|+|+|++++|++++++|.|.... ..+||||++.+-. .||++- ++++.|.|
T Consensus 63 ~~~~~~~Ng~----------~PGP~ir~~~Gd~v~v~v~N~l~~----~tsiHwHGl~~~~~~DGvP~----vt~~~I~P 124 (587)
T TIGR01480 63 ARPAITVNGS----------IPGPLLRWREGDTVRLRVTNTLPE----DTSIHWHGILLPFQMDGVPG----VSFAGIAP 124 (587)
T ss_pred EEEEEEECCc----------cCCceEEEECCCEEEEEEEcCCCC----CceEEcCCCcCCccccCCCc----ccccccCC
Confidence 3467999998 778999999999999999999865 3458999988754 599643 56788999
Q ss_pred CceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCC-CC----CCCCC---------------------
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYV-SK----RPKSD--------------------- 373 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~-~~----~P~~~--------------------- 373 (445)
|++++|.|++.+ +|+||||+|.. ..++.+..||+-........ .. +-+|.
T Consensus 125 G~s~~Y~f~~~~-~GTyWYHsH~~~q~~~GL~G~lIV~~~~~~p~~~D~E~vl~L~Dw~~~~p~~i~~~l~~~~~~~~~~ 203 (587)
T TIGR01480 125 GETFTYRFPVRQ-SGTYWYHSHSGFQEQAGLYGPLIIDPAEPDPVRADREHVVLLSDWTDLDPAALFRKLKVMAGHDNYY 203 (587)
T ss_pred CCeEEEEEECCC-CeeEEEecCchhHhhccceEEEEECCCccccCCCCceEEEEeeecccCCHHHHHHhhhccccccccc
Confidence 999999999987 89999999986 46677776664321111000 00 00000
Q ss_pred -----CCC----C-CC--------CC---------------------CCCCCCc-cceeEeeCCcEEEEEEEcCCCCccc
Q psy16562 374 -----SFP----R-GK--------PK---------------------DNSPRVP-MHFFKVQRDKRYLMRIIGGSCLACP 413 (445)
Q Consensus 374 -----~~~----~-~~--------~~---------------------~~~~~~~-~~~~~v~~G~~~~~rliN~s~~~Hp 413 (445)
.+. . +. .+ .|+.... ...+.+++|+++||||||++... .
T Consensus 204 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~d~~dv~G~~~~~LiNG~~~~~~~~~~v~~G~rvRLR~INas~~~-~ 282 (587)
T TIGR01480 204 KRTVADFFRDVRNDGLKQTLADRKMWGQMRMTPTDLADVNGSTYTYLMNGTTPAGNWTGLFRPGEKVRLRFINGSAMT-Y 282 (587)
T ss_pred ccchhhhhhhhccccccccccccccccccccCCcccccccCccceEEEcCccCCCCceEEECCCCEEEEEEEecCCCc-e
Confidence 000 0 00 00 1111110 11378999999999999999888 7
Q ss_pred eEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 414 LIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 414 ~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
|.|+|+||.|+||+.||.+++|..+|++.|+|
T Consensus 283 f~l~I~gh~m~VIa~DG~~v~Pv~vd~l~I~p 314 (587)
T TIGR01480 283 FDVRIPGLKLTVVAVDGQYVHPVSVDEFRIAP 314 (587)
T ss_pred EEEEECCCEEEEEEcCCcCcCceEeCeEEEcC
Confidence 99999999999999999999999999999976
|
This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. |
| >PRK10965 multicopper oxidase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=179.87 Aligned_cols=176 Identities=19% Similarity=0.227 Sum_probs=127.1
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecCC
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pG 323 (445)
...+.+||+ .|+|+|++++|+++++++.|..... .+||||++.+-+ .||++ ++.|.||
T Consensus 65 t~~~~yNg~----------~PGPtIr~~~Gd~v~v~~~N~L~~~----ttiHwHGl~~~~~~DG~p-------q~~I~PG 123 (523)
T PRK10965 65 TATWGYNGN----------LLGPAVRLQRGKAVTVDITNQLPEE----TTLHWHGLEVPGEVDGGP-------QGIIAPG 123 (523)
T ss_pred eEEEEECCC----------CCCceEEEECCCEEEEEEEECCCCC----ccEEcccccCCCccCCCC-------CCCCCCC
Confidence 357999998 7889999999999999999998753 458999998864 59953 6779999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCC---CCCCCCCCCC---------------
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSK---RPKSDSFPRG--------------- 378 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~---~P~~~~~~~~--------------- 378 (445)
++++|.|+++|++|+||||+|.. ..++.+..||+-......+.+. .-+...+++.
T Consensus 124 ~s~~Y~f~~~q~aGT~WYH~H~~g~t~~Qv~~GL~G~lIV~d~~~~~~~lp~~~~~~d~~lvlqD~~~~~~g~~~~~~~~ 203 (523)
T PRK10965 124 GKRTVTFTVDQPAATCWFHPHQHGKTGRQVAMGLAGLVLIEDDESLKLGLPKQWGVDDIPVILQDKRFSADGQIDYQLDV 203 (523)
T ss_pred CEEEEEeccCCCCceEEEecCCCCCcHHHHhCcCeEEEEEcCccccccCCcccCCCceeeEEEEeeeeCCCCceeccccc
Confidence 99999999998789999999963 3677777666543221100000 0000000000
Q ss_pred ----------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 ----------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 ----------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
....|+...+ .+.+ ++++|||||+|++... .+.|.+ ++|.|+||+.||.++ +|..+++|.|+|
T Consensus 204 ~~~~~g~~gd~~lVNG~~~p--~~~v-~~~~~RlRliNas~~r-~~~l~~~dg~~~~vIa~DG~~l~~P~~v~~l~lap 278 (523)
T PRK10965 204 MTAAVGWFGDTLLTNGAIYP--QHAA-PRGWLRLRLLNGCNAR-SLNLATSDGRPLYVIASDGGLLAEPVKVSELPILM 278 (523)
T ss_pred cccccCccCCeEEECCcccc--eeec-CCCEEEEEEEeccCCc-eEEEEEcCCceEEEEEeCCCcccCccEeCeEEECc
Confidence 0011222222 3444 5779999999998876 688887 899999999999986 699999999886
|
|
| >PRK10883 FtsI repressor; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-17 Score=169.96 Aligned_cols=177 Identities=18% Similarity=0.215 Sum_probs=125.2
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc-CCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS-DGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~-DG~~v~P~~~~~~~I~p 322 (445)
....+.+||+ .|+|+|++++|+++++++.|..... .++|||++.+-+. ||.+. ..|.|
T Consensus 64 ~~~v~~~ng~----------~pGPtir~~~Gd~v~v~v~N~L~~~----ttiHwHGl~~~~~~~~g~~-------~~I~P 122 (471)
T PRK10883 64 KASVWGINGR----------YLGPTIRVWKGDDVKLIYSNRLTEP----VSMTVSGLQVPGPLMGGPA-------RMMSP 122 (471)
T ss_pred eeeEEEECCc----------ccCCeEEEECCCEEEEEEEeCCCCC----CceeECCccCCCCCCCCcc-------ccCCC
Confidence 3467899998 7789999999999999999999753 3489999988654 44321 34899
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCC---CCCCCCCCC-------CC------
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSK---RPKSDSFPR-------GK------ 379 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~---~P~~~~~~~-------~~------ 379 (445)
|++|+|.|..++++|+||||+|.. ..++.+..||+-..+...+.+. ..+...+++ +.
T Consensus 123 G~~~~y~f~~~~~aGT~WYH~H~~~~t~~qv~~GL~G~lII~d~~~~~~~~p~~~~~~d~~l~l~D~~~~~~g~~~~~~~ 202 (471)
T PRK10883 123 NADWAPVLPIRQNAATCWYHANTPNRMAQHVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEP 202 (471)
T ss_pred CCeEEEEEecCCCceeeEEccCCCCchhhhHhcCCeEEEEEeCCcccccCCcccCCCcceeEEeeeeeeccCCCcccccc
Confidence 999999999888899999999964 2567676666533221111000 001100000 00
Q ss_pred ---------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 380 ---------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 380 ---------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
...|+...+ .+++++| +|||||+|++... .+.|+| ++|.|+||+.||..+ +|...+.+.|+|
T Consensus 203 ~~~g~~gd~~lvNG~~~p--~~~v~~~-~~RlRliNas~~~-~~~l~l~d~~~~~vIa~DGg~~~~P~~~~~l~l~p 275 (471)
T PRK10883 203 GSGGFVGDTLLVNGVQSP--YVEVSRG-WVRLRLLNASNAR-RYQLQMSDGRPLHVIAGDQGFLPAPVSVKQLSLAP 275 (471)
T ss_pred ccCCccCCeeEECCccCC--eEEecCC-EEEEEEEEccCCc-eEEEEEcCCCeEEEEEeCCCcccCCcEeCeEEECC
Confidence 011222222 5788875 7999999999877 789999 899999999997765 699999999886
|
|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=157.33 Aligned_cols=181 Identities=9% Similarity=0.062 Sum_probs=121.4
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecC
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~p 322 (445)
...+.+++||+ .|+|.|++++|+++++++.|......++.+++|++. +.||... + ..|.|
T Consensus 45 ~~~~~~~~nG~----------~pGP~irv~~Gd~v~v~v~N~~~~~~~h~~h~H~~~----~~dg~~~----~--~~I~P 104 (311)
T TIGR02376 45 VTYQAMTFDGS----------VPGPLIRVHEGDYVELTLINPPTNTMPHNVDFHAAT----GALGGAA----L--TQVNP 104 (311)
T ss_pred eEEEEEEECCc----------ccCceEEEECCCEEEEEEEeCCCCCCceeeeecCCC----ccCCCCc----c--eeECC
Confidence 34578999998 678999999999999999999742235566677653 4577431 1 23899
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCC----CCCCC-----C----CC------
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSK----RPKSD-----S----FP------ 376 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~----~P~~~-----~----~~------ 376 (445)
|+++.|.|++++ +|+||||||.. ..++.+..++.-.......... +-++. . ..
T Consensus 105 G~t~ty~F~~~~-~Gty~YH~H~~~~~~~q~~~Gl~G~liV~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~ 183 (311)
T TIGR02376 105 GETATLRFKATR-PGAFVYHCAPPGMVPWHVVSGMNGAIMVLPREGLPEYDKEYYIGESDLYTPKDEGEGGAYEDDVAAM 183 (311)
T ss_pred CCeEEEEEEcCC-CEEEEEEcCCCCchhHHhhcCcceEEEeeccCCCcCcceeEEEeeeeEeccccccccccccchHHHH
Confidence 999999999987 89999999942 3566666555432110000000 00000 0 00
Q ss_pred CCC----CCCCCCCCcc-ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCe--EEeEEEecC
Q psy16562 377 RGK----PKDNSPRVPM-HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL--VVDSVTLFP 445 (445)
Q Consensus 377 ~~~----~~~~~~~~~~-~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~--~~Dtv~v~p 445 (445)
... ...|+...+. ..+++++|+++||||+|++... .+.||+++++|.+|+.||.++.+. ..|++.|+|
T Consensus 184 ~~~~~~~~~iNG~~~~~~~~~~v~~G~~~RlRiiNa~~~~-~~~~~~~g~~~~~v~~DG~~~~~~~~~~~~~~i~P 258 (311)
T TIGR02376 184 RTLTPTHVVFNGAVGALTGDNALTAGVGERVLFVHSQPNR-DSRPHLIGGHGDYVWVTGKFANPPNRDVETWFIPG 258 (311)
T ss_pred hcCCCCEEEECCccCCCCCCcccccCCcEEEEEEcCCCCC-CCCCeEecCCceEEEECCcccCCCCCCcceEEECC
Confidence 000 0123321111 1357999999999999998654 466799999999999999999864 379999886
|
This family consists of copper-type nitrite reductase. It reduces nitrite to nitric oxide, the first step in denitrification. |
| >COG2132 SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.5e-12 Score=135.99 Aligned_cols=179 Identities=20% Similarity=0.290 Sum_probs=126.6
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~p 322 (445)
......+||. .++|.|++++|++++++++|..... .++|||++.+- +.||. ....++.+.+
T Consensus 51 ~~~~~~~~g~----------~~gP~i~~~~Gd~v~l~~~N~l~~~----t~vh~HG~~~p~~~dG~----~~~~~~~~~~ 112 (451)
T COG2132 51 GATVWGYNGA----------LPGPTIRVKKGDTVTLDLTNRLLVD----TSVHWHGLPVPGEMDGV----PPLTQIPPGP 112 (451)
T ss_pred CceeEEeccc----------ccCceEEEecCCEEEEEEEeCCCCC----ceEEEcCcccCccccCC----CcccccCCCC
Confidence 4567778883 6679999999999999999997652 45888987775 56884 2357788999
Q ss_pred CceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCCCC--------------------CCCCCCC
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRPKS--------------------DSFPRGK 379 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P~~--------------------~~~~~~~ 379 (445)
|+.+++.|+.++ +|+||||.|.. .+++.+..|+.-...........|.. ...+...
T Consensus 113 ~~~~~y~f~~~~-~gT~wyh~H~~~Q~~~Gl~G~~II~~~~~~~~~~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 191 (451)
T COG2132 113 GETPTYTFTQDV-PGTYWYHPHTHGQVYDGLAGALIIEDENSEPLGVDDEPVILQDDWLDEDGTDLYQEGPAMGGFPGDT 191 (451)
T ss_pred CCcEEEeecCCC-CcceEeccCCCchhhcccceeEEEeCCCCCCCCCCceEEEEEeeeecCCCCccccCCccccCCCCCe
Confidence 999999999987 56999999986 36777777776554332100000000 0000000
Q ss_pred CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 380 PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 380 ~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++... .+...++.+|||||+|++... ++.+++.++.|+|+++||.+++|..+|.+.|.|
T Consensus 192 ~~vnG~~~---p~~~~~~g~~rlRl~n~~~~~-~~~~~~~~~~~~Vi~~DG~~v~~~~~d~~~l~p 253 (451)
T COG2132 192 LLVNGAIL---PFKAVPGGVVRLRLLNAGNAR-TYHLALGGGPLTVIAVDGGPLPPVSVDELYLAP 253 (451)
T ss_pred EEECCCcc---ceeecCCCeEEEEEEecCCce-EEEEEecCceEEEEEeCCcCcCceeeeeEEecC
Confidence 01111111 355566777999999998555 577888899999999999999998889988875
|
|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.4e-12 Score=106.79 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=78.1
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~I~ 321 (445)
...+++||+ .|+|+|++++||++++++.|..... .+||+|++.+.. .||.+- +.+..|.
T Consensus 14 ~~~~~~ng~----------~pGPtI~v~~Gd~v~i~~~N~l~~~----~siH~HG~~~~~~~~~DG~~~----~~~~~i~ 75 (117)
T PF07732_consen 14 RKVWTYNGQ----------FPGPTIRVREGDTVRITVTNNLDEP----TSIHWHGLHQPPSPWMDGVPG----VTQCPIA 75 (117)
T ss_dssp EEEEEETTB----------SSEEEEEEETTEEEEEEEEEESSSG----BSEEEETSBSTTGGGGSGGTT----TSGSSBS
T ss_pred EEEEEECCC----------CCCCEEEEEcCCeeEEEEEeccccc----cccccceeeeeeeeecCCccc----ccceeEE
Confidence 578999999 7889999999999999999999653 337788877754 588543 4567799
Q ss_pred CCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEE
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQ 357 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~ 357 (445)
||++++|.|.+++++|+||||+|.. ..++.+..|++
T Consensus 76 pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~~GL~G~~iV~ 114 (117)
T PF07732_consen 76 PGESFTYEFTANQQAGTYWYHSHVHGQQVMGLYGAIIVE 114 (117)
T ss_dssp TTEEEEEEEEESSCSEEEEEEECSTTHHHTTEEEEEEEE
T ss_pred eecceeeeEeeeccccceeEeeCCCchhcCcCEEEEEEc
Confidence 9999999999998889999999987 36677776664
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 3 (or coupled binuclear) domains. ; GO: 0005507 copper ion binding; PDB: 2QT6_B 3KW7_B 2R7E_A 3CDZ_A 1SDD_A 3G5W_D 3UAC_A 2YXV_A 3OD3_A 3NSY_A .... |
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.6e-10 Score=94.94 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=72.9
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEE-EECCCCCCCeEEEEcCCEEEEEEEecCCC-CC
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAIL-SINRQLPGPSIQVCKGDTIIVDVKNHMID-RE 132 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~-~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~~ 132 (445)
...++|+.+|+.|.+..+ .....|+....+ +.|+++..+.|+|++||+|.++|.|..+. ..
T Consensus 22 ~~~~~f~~~i~~~~~~~~-----------------~~~~~~~~~~~i~a~n~~~~P~~I~VkaGD~Vtl~vtN~d~~~H~ 84 (135)
T TIGR03096 22 AAEQSFTVVINAYDTTIP-----------------ELNVEGVTVKNIRAFNVLNEPEALVVKKGTPVKVTVENKSPISEG 84 (135)
T ss_pred hccceeEEEEeccccEee-----------------EEEeCCEEEEEEEeeeeEEcCCEEEECCCCEEEEEEEeCCCCccc
Confidence 345589999997754332 123567766666 99999999999999999999999998751 22
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
.++++||+ +-.|+||++.+|+|.+.++|+|||||-.
T Consensus 85 f~i~~~gi---------------s~~I~pGet~TitF~adKpG~Y~y~C~~ 120 (135)
T TIGR03096 85 FSIDAYGI---------------SEVIKAGETKTISFKADKAGAFTIWCQL 120 (135)
T ss_pred eEECCCCc---------------ceEECCCCeEEEEEECCCCEEEEEeCCC
Confidence 23333321 1258999999999999999999999964
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.8e-09 Score=91.02 Aligned_cols=90 Identities=21% Similarity=0.352 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc---------------ccccCCCCCCceEEEEecC
Q psy16562 108 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM---------------VTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 108 PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~---------------~tq~pI~pG~~~~Y~f~~~ 172 (445)
-.+.+.++.|+.+++.+.|... .+..+|+||....... .++.+. .--..|+||+..+.+|.++
T Consensus 32 ~~~~~~~~~g~~v~~~l~N~~~-~~Hp~HlHG~~F~vl~-~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~ 109 (138)
T PF07731_consen 32 NTPVIEVKNGDVVEIVLQNNGS-MPHPFHLHGHSFQVLG-RGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRAD 109 (138)
T ss_dssp TTSEEEEETTSEEEEEEEECTT-SSEEEEETTSEEEEEE-ETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEET
T ss_pred CcceEEEeCCCEEEEEEECCCC-CccceEEEeeEEEeee-cCCcccccccccccccccCcccccccccceeEEEEEEEee
Confidence 3569999999999999999877 7999999999864221 222221 0112478999999999999
Q ss_pred CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 173 PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 173 ~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
.+|.|.||||...+...||++.+.|.+
T Consensus 110 ~~G~w~~HCHi~~H~~~GM~~~~~v~~ 136 (138)
T PF07731_consen 110 NPGPWLFHCHILEHEDNGMMAVFVVGP 136 (138)
T ss_dssp STEEEEEEESSHHHHHTT-EEEEEECH
T ss_pred cceEEEEEEchHHHHhCCCeEEEEEcC
Confidence 999999999999999999999999964
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >PF00394 Cu-oxidase: Multicopper oxidase; InterPro: IPR001117 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.4e-09 Score=93.80 Aligned_cols=56 Identities=38% Similarity=0.651 Sum_probs=50.3
Q ss_pred cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 ~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...+++++|+++||||||++... .+.|+|+||.|+||+.||.+++|...|++.|+|
T Consensus 59 ~~~~~v~~g~~~rlRliNa~~~~-~~~~~i~gh~~~Via~DG~~v~p~~~~~l~l~~ 114 (159)
T PF00394_consen 59 PPVIKVKPGERYRLRLINAGAST-SFNFSIDGHPMTVIAADGVPVEPYKVDTLVLAP 114 (159)
T ss_dssp SGEEEEETTTEEEEEEEEESSS--BEEEEETTBCEEEEEETTEEEEEEEESBEEE-T
T ss_pred cceEEEcCCcEEEEEEEeccCCe-eEEEEeeccceeEeeeccccccccccceEEeeC
Confidence 44799999999999999998876 688899999999999999999999999999876
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 1 (blue) domains. These domains are also present in proteins that have lost the ability to bind copper.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1RZP_A 2AVF_D 1NIA_A 1KCB_A 2NRD_A 1NIB_A 2BW4_A 1RZQ_C 2BWD_A 2BWI_A .... |
| >PF07731 Cu-oxidase_2: Multicopper oxidase; InterPro: IPR011706 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.9e-07 Score=80.26 Aligned_cols=78 Identities=18% Similarity=0.306 Sum_probs=70.3
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc-----------eeeEecEEEecCCceEEEEEecCC
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-----------EPLVVDSVTLFPGDRVDVIIHTNQ 334 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v-----------~P~~~~~~~I~pGeR~dv~v~~~~ 334 (445)
...+.++.|+.++|+|.|.+.. .+.|++|||.|.|++.++... .|...|++.|.||++..+.+.++.
T Consensus 33 ~~~~~~~~g~~v~~~l~N~~~~--~Hp~HlHG~~F~vl~~~~~~~~~~~~~~~~~~~~~~~DTv~v~~~~~~~i~~~~~~ 110 (138)
T PF07731_consen 33 TPVIEVKNGDVVEIVLQNNGSM--PHPFHLHGHSFQVLGRGGGPWNPDDTQSYNPENPGWRDTVLVPPGGWVVIRFRADN 110 (138)
T ss_dssp TSEEEEETTSEEEEEEEECTTS--SEEEEETTSEEEEEEETTEESTTHCGGCCCSSSSSEESEEEEETTEEEEEEEEETS
T ss_pred cceEEEeCCCEEEEEEECCCCC--ccceEEEeeEEEeeecCCcccccccccccccccCcccccccccceeEEEEEEEeec
Confidence 4689999999999999998876 467889999999999988773 477899999999999999999985
Q ss_pred CCceEEEEEEec
Q psy16562 335 SNNLYWMQAKTL 346 (445)
Q Consensus 335 ~~G~y~~~~~~~ 346 (445)
+|.|.+|||..
T Consensus 111 -~G~w~~HCHi~ 121 (138)
T PF07731_consen 111 -PGPWLFHCHIL 121 (138)
T ss_dssp -TEEEEEEESSH
T ss_pred -ceEEEEEEchH
Confidence 89999999987
|
Since free copper is toxic, even at very low concentrations, its homeostasis in living organisms is tightly controlled by subtle molecular mechanisms. In eukaryotes, before being transported inside the cell via the high-affinity copper transporters of the CTR family, the copper (II) ion is reduced to copper (I). In blue copper proteins such as cupredoxin, the copper (I) ion form is stabilised by a constrained His2Cys coordination environment. Multicopper oxidases oxidise their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre; dioxygen binds to the trinuclear centre and, following the transfer of four electrons, is reduced to two molecules of water []. There are three spectroscopically different copper centres found in multicopper oxidases: type 1 (or blue), type 2 (or normal) and type 3 (or coupled binuclear) [, ]. Multicopper oxidases consist of 2, 3 or 6 of these homologous domains, which also share homology to the cupredoxins azurin and plastocyanin. Structurally, these domains consist of a cupredoxin-like fold, a beta-sandwich consisting of 7 strands in 2 beta-sheets, arranged in a Greek-key beta-barrel []. Multicopper oxidases include: Ceruloplasmin (1.16.3.1 from EC) (ferroxidase), a 6-domain enzyme found in the serum of mammals and birds that oxidizes different inorganic and organic substances; exhibits internal sequence homology that appears to have evolved from the triplication of a Cu-binding domain similar to that of laccase and ascorbate oxidase. Laccase (1.10.3.2 from EC) (urishiol oxidase), a 3-domain enzyme found in fungi and plants, which oxidizes different phenols and diamines. CueO is a laccase found in Escherichia coli that is involved in copper-resistance []. Ascorbate oxidase (1.10.3.3 from EC), a 3-domain enzyme found in higher plants. Nitrite reductase (1.7.2.1 from EC), a 2-domain enzyme containing type-1 and type-2 copper centres [, ]. In addition to the above enzymes there are a number of other proteins that are similar to the multi-copper oxidases in terms of structure and sequence, some of which have lost the ability to bind copper. These include: copper resistance protein A (copA) from a plasmid in Pseudomonas syringae; domain A of (non-copper binding) blood coagulation factors V (Fa V) and VIII (Fa VIII) []; yeast FET3 required for ferrous iron uptake []; yeast hypothetical protein YFL041w; and the fission yeast homologue SpAC1F7.08. This entry represents multicopper oxidase type 2 domains.; GO: 0005507 copper ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GDC_C 3ZX1_A 2YAH_A 2YAR_A 2YAQ_A 2YAO_A 2YAM_A 2YAF_A 2YAP_A 2XU9_A .... |
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.7e-06 Score=73.69 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=66.1
Q ss_pred CCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEE---EccCCCcceeeEecE
Q psy16562 241 TRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV---IASDGTAVEPLVVDS 317 (445)
Q Consensus 241 ~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v---ia~DG~~v~P~~~~~ 317 (445)
.++....+.+||... |.|++++|++++|++.|.+.. ..+.|.|+++.... -..||.+. ..+
T Consensus 37 ~~~~~~~f~~~~~~~-----------P~I~v~~Gd~V~v~v~N~~~~-~~H~~~I~~~g~~~~~~p~mdG~~~----~~~ 100 (148)
T TIGR03095 37 PGPSMYSFEIHDLKN-----------PTIVIPEGVTVHFTVINTDTD-SGHNFDISKRGPPYPYMPGMDGLGF----VAG 100 (148)
T ss_pred CCCCceeEEecCCCC-----------CEEEEcCCCEEEEEEEeCCCC-ccccEEeecCCCccccccccCCCCc----ccc
Confidence 345677899999744 699999999999999999763 24556666554322 13577432 223
Q ss_pred EEecC----Cce--EEEEEecCCCCceEEEEEEecC---CCceeeEEE
Q psy16562 318 VTLFP----GDR--VDVIIHTNQSNNLYWMQAKTLC---DSITAEAVL 356 (445)
Q Consensus 318 ~~I~p----GeR--~dv~v~~~~~~G~y~~~~~~~~---~~~~~~ail 356 (445)
..+.| |+. .++.+++++ +|+|||||+..| .++.+..++
T Consensus 101 ~~i~p~~~~g~~~~~~~tf~f~~-aGtywyhC~~pgH~~~GM~G~iiV 147 (148)
T TIGR03095 101 TGFLPPPKSGKFGYTDFTYHFST-AGTYWYLCTYPGHAENGMYGKIVV 147 (148)
T ss_pred CcccCCCCCCccceeEEEEECCC-CeEEEEEcCChhHHHCCCEEEEEE
Confidence 33333 433 478888876 899999998762 456655443
|
Rusticyanin is a blue copper protein, described in an obligate acidophilic chemolithoautroph, Acidithiobacillus ferrooxidans, as an electron transfer protein. It can constitute up to 5 percent of protein in cells grown on Fe(II) and is thought to be part of an electron chain for Fe(II) oxidation, with two c-type cytochromes, an aa3-type cytochrome oxidase, and 02 as terminal electron acceptor. It is rather closely related to sulfocyanin (TIGR03094). |
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=98.24 E-value=5.4e-06 Score=68.28 Aligned_cols=84 Identities=12% Similarity=0.203 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc--cccCCCCCCceEEEEecCCCcceEEecccc
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV--TQCPIPSSTTFRYKFPAMPSGTFFYHSHVG 184 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~--tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~ 184 (445)
|--..|++++||+| ++.|.-. .++++..+....... ..+..+.. +.--+.||+++++.|.. +|+|.|||.
T Consensus 14 F~P~~i~v~~G~~V--~~~N~~~-~~H~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pG~t~~~tF~~--~G~y~y~C~-- 85 (99)
T TIGR02656 14 FEPAKISIAAGDTV--EWVNNKG-GPHNVVFDEDAVPAG-VKELAKSLSHKDLLNSPGESYEVTFST--PGTYTFYCE-- 85 (99)
T ss_pred EeCCEEEECCCCEE--EEEECCC-CCceEEECCCCCccc-hhhhcccccccccccCCCCEEEEEeCC--CEEEEEEcC--
Confidence 33468999999986 5668654 567776654321110 00001111 12246899999998885 999999998
Q ss_pred hhhhcCceeEEEEe
Q psy16562 185 LQKMDGLEGSMIIR 198 (445)
Q Consensus 185 ~q~~~Gl~G~lIV~ 198 (445)
.+...||.|.|+|+
T Consensus 86 ~H~~aGM~G~I~V~ 99 (99)
T TIGR02656 86 PHRGAGMVGKITVE 99 (99)
T ss_pred CccccCCEEEEEEC
Confidence 67888999999984
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.1e-05 Score=66.33 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCC-CCCcccccCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD-GVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~D-Gvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
-+.|++++||+|. +.|... .++++.+=--........+ ..+......+.||+++++.|+ .+|+|.|+|- - |.
T Consensus 16 P~~i~V~~G~tV~--~~n~~~-~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~--~~G~y~y~C~-P-H~ 88 (99)
T PF00127_consen 16 PSEITVKAGDTVT--FVNNDS-MPHNVVFVADGMPAGADSDYVPPGDSSPLLAPGETYSVTFT--KPGTYEYYCT-P-HY 88 (99)
T ss_dssp SSEEEEETTEEEE--EEEESS-SSBEEEEETTSSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE--SSEEEEEEET-T-TG
T ss_pred CCEEEECCCCEEE--EEECCC-CCceEEEecccccccccccccCccccceecCCCCEEEEEeC--CCeEEEEEcC-C-Cc
Confidence 3789999999865 666533 4566655321000000000 000001124789999999998 8999999998 4 88
Q ss_pred hcCceeEEEEe
Q psy16562 188 MDGLEGSMIIR 198 (445)
Q Consensus 188 ~~Gl~G~lIV~ 198 (445)
..||.|.|+|+
T Consensus 89 ~~GM~G~i~V~ 99 (99)
T PF00127_consen 89 EAGMVGTIIVE 99 (99)
T ss_dssp GTTSEEEEEEE
T ss_pred ccCCEEEEEEC
Confidence 88999999995
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.5e-05 Score=65.67 Aligned_cols=76 Identities=14% Similarity=0.330 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchh
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQ 186 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q 186 (445)
|--+.|++++||+| ++.|... .++++.+.|.. +.. .+.-.+.||++++|.|.. +|+|-|+|- .|
T Consensus 44 F~P~~i~v~~Gd~V--~~~N~~~-~~H~v~~~~~~--------~~~-~~~~~~~pg~t~~~tF~~--~G~y~y~C~--~H 107 (119)
T PRK02710 44 FEPSTLTIKAGDTV--KWVNNKL-APHNAVFDGAK--------ELS-HKDLAFAPGESWEETFSE--AGTYTYYCE--PH 107 (119)
T ss_pred EeCCEEEEcCCCEE--EEEECCC-CCceEEecCCc--------ccc-ccccccCCCCEEEEEecC--CEEEEEEcC--CC
Confidence 33478999999985 5678754 57777765431 110 111247899999999986 899999997 56
Q ss_pred hhcCceeEEEEe
Q psy16562 187 KMDGLEGSMIIR 198 (445)
Q Consensus 187 ~~~Gl~G~lIV~ 198 (445)
...||.|.|+|+
T Consensus 108 ~~~gM~G~I~V~ 119 (119)
T PRK02710 108 RGAGMVGKITVE 119 (119)
T ss_pred ccCCcEEEEEEC
Confidence 678999999984
|
|
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.4e-05 Score=65.24 Aligned_cols=72 Identities=13% Similarity=0.159 Sum_probs=57.1
Q ss_pred CeE-EEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 246 DAI-LINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 246 ~~~-lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
..+ ..||+..| +.|+|++|+++.|++.|.... ++.+.++++++ +..|.||+
T Consensus 49 ~~i~a~n~~~~P----------~~I~VkaGD~Vtl~vtN~d~~--~H~f~i~~~gi----------------s~~I~pGe 100 (135)
T TIGR03096 49 KNIRAFNVLNEP----------EALVVKKGTPVKVTVENKSPI--SEGFSIDAYGI----------------SEVIKAGE 100 (135)
T ss_pred EEEEeeeeEEcC----------CEEEECCCCEEEEEEEeCCCC--ccceEECCCCc----------------ceEECCCC
Confidence 344 66777444 689999999999999998863 56666766531 45689999
Q ss_pred eEEEEEecCCCCceEEEEEEec
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~ 346 (445)
+..+.|.+++ +|.|+|+|...
T Consensus 101 t~TitF~adK-pG~Y~y~C~~H 121 (135)
T TIGR03096 101 TKTISFKADK-AGAFTIWCQLH 121 (135)
T ss_pred eEEEEEECCC-CEEEEEeCCCC
Confidence 9999999998 89999999765
|
Nitrosocyanin, as described from the obligate chemolithoautotroph Nitrosomonas europaea, is a red copper protein of unknown function with sequence similarity to a number of blue copper redox proteins. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.1e-05 Score=63.50 Aligned_cols=83 Identities=14% Similarity=0.243 Sum_probs=46.5
Q ss_pred EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcc
Q psy16562 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGT 176 (445)
Q Consensus 97 ~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT 176 (445)
...+..-|+.|=-..|+++.|++++|.+.|... ..+.+...++... -.|.||++.++.|.+.++|+
T Consensus 22 ~v~I~~~~~~f~P~~i~v~~G~~v~l~~~N~~~-~~h~~~i~~~~~~-------------~~l~~g~~~~~~f~~~~~G~ 87 (104)
T PF13473_consen 22 TVTITVTDFGFSPSTITVKAGQPVTLTFTNNDS-RPHEFVIPDLGIS-------------KVLPPGETATVTFTPLKPGE 87 (104)
T ss_dssp --------EEEES-EEEEETTCEEEEEEEE-SS-S-EEEEEGGGTEE-------------EEE-TT-EEEEEEEE-S-EE
T ss_pred cccccccCCeEecCEEEEcCCCeEEEEEEECCC-CcEEEEECCCceE-------------EEECCCCEEEEEEcCCCCEE
Confidence 334444456665569999999999999999976 4544444442211 25899999999999999999
Q ss_pred eEEecccchhhhcCceeEEEE
Q psy16562 177 FFYHSHVGLQKMDGLEGSMII 197 (445)
Q Consensus 177 ~wYH~H~~~q~~~Gl~G~lIV 197 (445)
|=|+|-... . |.|-|||
T Consensus 88 y~~~C~~~~---~-m~G~liV 104 (104)
T PF13473_consen 88 YEFYCTMHP---N-MKGTLIV 104 (104)
T ss_dssp EEEB-SSS----T-TB-----
T ss_pred EEEEcCCCC---c-ceecccC
Confidence 999998554 2 6677765
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00023 Score=56.56 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=49.0
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+++.||+|. +.|... .+++++.....-.. .+ ..-..+.||+++++.| .++|+|-|||-...
T Consensus 10 P~~i~v~~GdtVt--~~N~d~-~~Hnv~~~~g~~~~---~~----~~~~~~~~g~~~~~tf--~~~G~y~y~C~~Hp--- 74 (83)
T TIGR02657 10 TPELHVKVGDTVT--WINREA-MPHNVHFVAGVLGE---AA----LKGPMMKKEQAYSLTF--TEAGTYDYHCTPHP--- 74 (83)
T ss_pred CCEEEECCCCEEE--EEECCC-CCccEEecCCCCcc---cc----ccccccCCCCEEEEEC--CCCEEEEEEcCCCC---
Confidence 4789999999975 678765 67777765432111 11 0001256787777655 57999999996432
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
+|.|.|+|+
T Consensus 75 -~M~G~v~V~ 83 (83)
T TIGR02657 75 -FMRGKVVVE 83 (83)
T ss_pred -CCeEEEEEC
Confidence 489999985
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00019 Score=76.40 Aligned_cols=96 Identities=25% Similarity=0.323 Sum_probs=68.6
Q ss_pred ecCCCeEE--EEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEE
Q psy16562 91 VTADGFER--AILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 168 (445)
Q Consensus 91 ~~~dG~~~--~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~ 168 (445)
+..+|.+. .+....-.|=-+.|+|++||.|.++++|.-..+-.+ ||+...+. |+-. -+.||++.+..
T Consensus 534 v~R~G~kv~Vym~a~a~~f~p~~i~Vk~GDeVt~~lTN~d~~~DVi---HGF~Ip~~----nI~~----dv~PG~t~svt 602 (635)
T PRK02888 534 VIRDGNKVRVYMTSQAPAFGLREFTVKQGDEVTVIVTNLDKVEDLT---HGFAIPNY----GVNM----EVAPQATASVT 602 (635)
T ss_pred eEEeCCEEEEEEEEEecccCCceEEecCCCEEEEEEEeCCcccccc---cceeeccc----CccE----EEcCCceEEEE
Confidence 44566433 455555566556899999999999999953211122 77766431 1211 47799999999
Q ss_pred EecCCCcceEEeccc---chhhhcCceeEEEEeC
Q psy16562 169 FPAMPSGTFFYHSHV---GLQKMDGLEGSMIIRT 199 (445)
Q Consensus 169 f~~~~~GT~wYH~H~---~~q~~~Gl~G~lIV~~ 199 (445)
|++.++|+|||||.. ..|. +|.|-|+|++
T Consensus 603 F~adkPGvy~~~CtefCGa~H~--~M~G~~iVep 634 (635)
T PRK02888 603 FTADKPGVYWYYCTWFCHALHM--EMRGRMLVEP 634 (635)
T ss_pred EEcCCCEEEEEECCcccccCcc--cceEEEEEEe
Confidence 999999999999985 3443 8999999975
|
|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00088 Score=56.66 Aligned_cols=76 Identities=12% Similarity=0.164 Sum_probs=49.5
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEee-CCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHW-HGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHw-HG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
...|.|++||+|+....|. ++++.+ .+. .-+|.... .-.+|+++++.| +.+|+|-|+|- .|.
T Consensus 14 P~~v~V~~GdTV~f~n~d~----~Hnv~~~~~~------~p~g~~~~---~s~~g~~~~~tF--~~~G~Y~Y~C~--pH~ 76 (116)
T TIGR02375 14 PAYIRAAPGDTVTFVPTDK----GHNVETIKGM------IPEGAEAF---KSKINEEYTVTV--TEEGVYGVKCT--PHY 76 (116)
T ss_pred CCEEEECCCCEEEEEECCC----CeeEEEccCC------CcCCcccc---cCCCCCEEEEEe--CCCEEEEEEcC--CCc
Confidence 4689999999977555443 344443 221 11222211 123566655555 58999999997 678
Q ss_pred hcCceeEEEEeCCC
Q psy16562 188 MDGLEGSMIIRTPK 201 (445)
Q Consensus 188 ~~Gl~G~lIV~~~~ 201 (445)
..||.|.|+|.++.
T Consensus 77 ~~GM~G~V~Vg~~~ 90 (116)
T TIGR02375 77 GMGMVALIQVGDPP 90 (116)
T ss_pred cCCCEEEEEECCCC
Confidence 88999999998753
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0038 Score=55.96 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=67.9
Q ss_pred EEECCCCCC-CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCC-------CCCCCCcc----c-----ccCCCCCC
Q psy16562 101 LSINRQLPG-PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP-------WMDGVPMV----T-----QCPIPSST 163 (445)
Q Consensus 101 ~~~Ng~~PG-PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~-------~~DGvp~~----t-----q~pI~pG~ 163 (445)
+-+||+-.| |+|.+-.|-+|.|+++|.-. .++++-. -+..++ ..||.... + -..|.+|+
T Consensus 75 fNfnGts~G~mtIyiPaGw~V~V~f~N~e~-~pHnl~i---v~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gq 150 (195)
T TIGR03094 75 FNFNGTSYGAMTIYLPAGWNVYVTFTNYES-LPHNLKL---LPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGH 150 (195)
T ss_pred ccccCccCCceEEEEeCCCEEEEEEEcCCC-CCccEEE---ecCCCCCCCccccccCceeEeecccccCccccccccccc
Confidence 456676555 69999999999999999864 4544333 333332 24554322 1 12356788
Q ss_pred ceEEEEecCCCcceEEecccchhhhcCceeEEEEeCC
Q psy16562 164 TFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 164 ~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
+-.-.|..-++|+|||-|-...|..+||+|-+||-..
T Consensus 151 s~sg~~~~~~~G~YwlvCgipGHAesGMw~~lIVSs~ 187 (195)
T TIGR03094 151 SRSGWWNDTSAGKYWLVCGITGHAESGMWAVVIVSSN 187 (195)
T ss_pred eeEEEeccCCCeeEEEEcccCChhhcCcEEEEEEecC
Confidence 8555566669999999999999999999999999654
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0026 Score=53.68 Aligned_cols=77 Identities=18% Similarity=0.288 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchh
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQ 186 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q 186 (445)
|=-..|.|++||+|. +.|+....++++..-+ ...+ | .......+|++|+|.|. ++|+|-|+|- .|
T Consensus 39 F~P~~ltV~~GdTVt--w~~~~d~~~HnV~s~~----~~~f-~----s~~~~~~~G~t~s~Tf~--~~G~Y~Y~C~--pH 103 (115)
T TIGR03102 39 FDPPAIRVDPGTTVV--WEWTGEGGGHNVVSDG----DGDL-D----ESERVSEEGTTYEHTFE--EPGIYLYVCV--PH 103 (115)
T ss_pred EeCCEEEECCCCEEE--EEECCCCCCEEEEECC----CCCc-c----ccccccCCCCEEEEEec--CCcEEEEEcc--CC
Confidence 334689999999977 6654332455554311 0001 1 01112578998888884 7999999996 45
Q ss_pred hhcCceeEEEEe
Q psy16562 187 KMDGLEGSMIIR 198 (445)
Q Consensus 187 ~~~Gl~G~lIV~ 198 (445)
...||.|.|+|+
T Consensus 104 ~~~gM~G~I~V~ 115 (115)
T TIGR03102 104 EALGMKGAVVVE 115 (115)
T ss_pred CCCCCEEEEEEC
Confidence 667999999984
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0034 Score=53.81 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=50.8
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
-.|+|.+||+|+ +.|... ..++++.=+..- .+|.-.+ .-.+|++|++.|. .+|+|-|+|- .|+.+
T Consensus 54 A~v~v~pGDTVt--w~~~d~-~~Hnv~~~~~~~-----~~g~~~~---~~~~~~s~~~Tfe--~~G~Y~Y~C~--PH~~~ 118 (128)
T COG3794 54 AEVTVKPGDTVT--WVNTDS-VGHNVTAVGGMD-----PEGSGTL---KAGINESFTHTFE--TPGEYTYYCT--PHPGM 118 (128)
T ss_pred cEEEECCCCEEE--EEECCC-CCceEEEeCCCC-----ccccccc---ccCCCcceEEEec--ccceEEEEec--cCCCC
Confidence 389999999955 777765 466666554331 1233221 2344577776665 4999999995 35778
Q ss_pred CceeEEEEeC
Q psy16562 190 GLEGSMIIRT 199 (445)
Q Consensus 190 Gl~G~lIV~~ 199 (445)
||.|.|+|++
T Consensus 119 gM~G~IvV~~ 128 (128)
T COG3794 119 GMKGKIVVGE 128 (128)
T ss_pred CcEEEEEeCC
Confidence 9999999964
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0088 Score=54.66 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=70.8
Q ss_pred EEEEECCCCCC-CeEEEEcCCEEEEEEEecCCCCCceEee--CCcccCC--CCCCCCCCc---------ccccCCCCCCc
Q psy16562 99 AILSINRQLPG-PSIQVCKGDTIIVDVKNHMIDREVTLHW--HGVYQKV--TPWMDGVPM---------VTQCPIPSSTT 164 (445)
Q Consensus 99 ~~~~~Ng~~PG-PtI~v~~GD~v~V~v~N~l~~~~tsiHw--HG~~~~~--~~~~DGvp~---------~tq~pI~pG~~ 164 (445)
..+.|||..=| ++|.+-.|-+|.|+++|.-. .++++-. -+..++. .-..||..- .+-..|.+|++
T Consensus 74 ~~~nfnGts~G~m~i~VPAGw~V~i~f~N~~~-l~Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~~~GI~~G~s 152 (196)
T PF06525_consen 74 NPFNFNGTSNGQMTIYVPAGWNVQITFTNQES-LPHNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYTSNGISSGQS 152 (196)
T ss_pred CceeeecccCCcEEEEEcCCCEEEEEEEcCCC-CCeeEEEEeCCCCCCCccccCCCCceeeeccCCCCccccCCccCCce
Confidence 36788887554 69999999999999999743 3322221 1111111 113444221 11235789999
Q ss_pred eEEEEecCCCcceEEecccchhhhcCceeEEEEeCC
Q psy16562 165 FRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 165 ~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
..-.|..-++|+||+=|-...|...||++-|||.+.
T Consensus 153 ~~~~~~~l~aG~YwlvC~ipGHA~sGMw~~LiVs~~ 188 (196)
T PF06525_consen 153 ASGVYNDLPAGYYWLVCGIPGHAESGMWGVLIVSSN 188 (196)
T ss_pred eeEEEccCCCceEEEEccCCChhhcCCEEEEEEecC
Confidence 987787779999999999999999999999999764
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.015 Score=48.02 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=42.1
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..+++++|++++|.+.|.+.. .+.|.+.+.. ....|.||++..+.|.+.+ +|+|-++|...
T Consensus 35 ~~i~v~~G~~v~l~~~N~~~~--~h~~~i~~~~----------------~~~~l~~g~~~~~~f~~~~-~G~y~~~C~~~ 95 (104)
T PF13473_consen 35 STITVKAGQPVTLTFTNNDSR--PHEFVIPDLG----------------ISKVLPPGETATVTFTPLK-PGEYEFYCTMH 95 (104)
T ss_dssp -EEEEETTCEEEEEEEE-SSS---EEEEEGGGT----------------EEEEE-TT-EEEEEEEE-S--EEEEEB-SSS
T ss_pred CEEEEcCCCeEEEEEEECCCC--cEEEEECCCc----------------eEEEECCCCEEEEEEcCCC-CEEEEEEcCCC
Confidence 489999999999999999876 3566665511 2256899999999997766 89999988653
|
|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.019 Score=47.07 Aligned_cols=79 Identities=9% Similarity=0.072 Sum_probs=46.2
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|. |.+.. ++.+.++.-.+..-+.+.. .....+.+.+.||+++++.|+. +|+|.|+|..
T Consensus 16 P~~i~v~~G~~V~~~--N~~~~--~H~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pG~t~~~tF~~---~G~y~y~C~~ 86 (99)
T TIGR02656 16 PAKISIAAGDTVEWV--NNKGG--PHNVVFDEDAVPAGVKELA--KSLSHKDLLNSPGESYEVTFST---PGTYTFYCEP 86 (99)
T ss_pred CCEEEECCCCEEEEE--ECCCC--CceEEECCCCCccchhhhc--ccccccccccCCCCEEEEEeCC---CEEEEEEcCC
Confidence 458999999998765 76643 3454443221110000000 0111255778999999997764 7999999974
Q ss_pred c-CCCceee
Q psy16562 346 L-CDSITAE 353 (445)
Q Consensus 346 ~-~~~~~~~ 353 (445)
. ..++.+.
T Consensus 87 H~~aGM~G~ 95 (99)
T TIGR02656 87 HRGAGMVGK 95 (99)
T ss_pred ccccCCEEE
Confidence 4 2344444
|
Members of this family are plastocyanin, a blue copper protein related to pseudoazurin, halocyanin, amicyanin, etc. This protein, located in the thylakoid luman, performs electron transport to photosystem I in Cyanobacteria and chloroplasts. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.062 Score=57.66 Aligned_cols=67 Identities=13% Similarity=0.268 Sum_probs=49.4
Q ss_pred cccceEEEecCcEEEEEEEccCC-CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSC-LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~-~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
+....|+|+.|+.|.|+|.|... ..-.+.|.|.++.+ .+.+.||+.-.+.|++++ ||.||++
T Consensus 552 f~p~~i~Vk~GDeVt~~lTN~d~~~DViHGF~Ip~~nI----------------~~dv~PG~t~svtF~adk-PGvy~~~ 614 (635)
T PRK02888 552 FGLREFTVKQGDEVTVIVTNLDKVEDLTHGFAIPNYGV----------------NMEVAPQATASVTFTADK-PGVYWYY 614 (635)
T ss_pred cCCceEEecCCCEEEEEEEeCCcccccccceeecccCc----------------cEEEcCCceEEEEEEcCC-CEEEEEE
Confidence 45568999999999999999643 11133444433332 235779999999999998 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|.-.|
T Consensus 615 CtefC 619 (635)
T PRK02888 615 CTWFC 619 (635)
T ss_pred CCccc
Confidence 98776
|
|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.17 Score=46.43 Aligned_cols=88 Identities=16% Similarity=0.176 Sum_probs=57.7
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEec--cc---ceEEEccCCCcce-----eeEec
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIE--KH---QLQVIASDGTAVE-----PLVVD 316 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~--gh---~~~via~DG~~v~-----P~~~~ 316 (445)
.+-+||...- -.+|.|..|-+|.|+++|.+... ++|-|- +- ....++.||..+. +....
T Consensus 75 ~~nfnGts~G---------~m~i~VPAGw~V~i~f~N~~~l~--Hnl~iv~~~~~~p~~~~i~~DgkIl~~~G~s~~~~~ 143 (196)
T PF06525_consen 75 PFNFNGTSNG---------QMTIYVPAGWNVQITFTNQESLP--HNLVIVQNDTPTPNNPPISSDGKILLYVGASPGNYT 143 (196)
T ss_pred ceeeecccCC---------cEEEEEcCCCEEEEEEEcCCCCC--eeEEEEeCCCCCCCccccCCCCceeeeccCCCCccc
Confidence 4556775332 25899999999999999998654 444442 21 2345667886552 11112
Q ss_pred EEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 317 SVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 317 ~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.--|.+||+....+..-. +|.||+.|--.
T Consensus 144 ~~GI~~G~s~~~~~~~l~-aG~YwlvC~ip 172 (196)
T PF06525_consen 144 SNGISSGQSASGVYNDLP-AGYYWLVCGIP 172 (196)
T ss_pred cCCccCCceeeEEEccCC-CceEEEEccCC
Confidence 235679999997775433 89999998554
|
The most closely related proteins characterised as functionally different are the rusticyanins. |
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.21 Score=42.40 Aligned_cols=70 Identities=7% Similarity=0.110 Sum_probs=44.8
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++|+| +|.... ++++.+++. ++ .....+.+.||+++++.|+. +|.|.|+|..
T Consensus 46 P~~i~v~~Gd~V~~--~N~~~~--~H~v~~~~~-------~~-----~~~~~~~~~pg~t~~~tF~~---~G~y~y~C~~ 106 (119)
T PRK02710 46 PSTLTIKAGDTVKW--VNNKLA--PHNAVFDGA-------KE-----LSHKDLAFAPGESWEETFSE---AGTYTYYCEP 106 (119)
T ss_pred CCEEEEcCCCEEEE--EECCCC--CceEEecCC-------cc-----ccccccccCCCCEEEEEecC---CEEEEEEcCC
Confidence 35899999998776 476543 345544421 11 11234568999999988764 7999999965
Q ss_pred c-CCCceeeE
Q psy16562 346 L-CDSITAEA 354 (445)
Q Consensus 346 ~-~~~~~~~a 354 (445)
. ..++.+..
T Consensus 107 H~~~gM~G~I 116 (119)
T PRK02710 107 HRGAGMVGKI 116 (119)
T ss_pred CccCCcEEEE
Confidence 4 33444443
|
|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.19 Score=41.03 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=46.2
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc--e----eeEecEEEecCCceEEEEEecCCCCc
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV--E----PLVVDSVTLFPGDRVDVIIHTNQSNN 337 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v--~----P~~~~~~~I~pGeR~dv~v~~~~~~G 337 (445)
+....|+|++|++|+| +|.... .+++.+ .. |+.+. + +..-....+.||+.+++.|+ .+|
T Consensus 14 F~P~~i~V~~G~tV~~--~n~~~~--~Hnv~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~tF~---~~G 78 (99)
T PF00127_consen 14 FDPSEITVKAGDTVTF--VNNDSM--PHNVVF-------VA-DGMPAGADSDYVPPGDSSPLLAPGETYSVTFT---KPG 78 (99)
T ss_dssp EESSEEEEETTEEEEE--EEESSS--SBEEEE-------ET-TSSHTTGGHCHHSTTCEEEEBSTTEEEEEEEE---SSE
T ss_pred EeCCEEEECCCCEEEE--EECCCC--CceEEE-------ec-ccccccccccccCccccceecCCCCEEEEEeC---CCe
Confidence 4456899999998765 554332 223332 22 32211 1 11115677999999999887 379
Q ss_pred eEEEEEEec-CCCceeeEE
Q psy16562 338 LYWMQAKTL-CDSITAEAV 355 (445)
Q Consensus 338 ~y~~~~~~~-~~~~~~~ai 355 (445)
+|.|.|... ..++.+..+
T Consensus 79 ~y~y~C~PH~~~GM~G~i~ 97 (99)
T PF00127_consen 79 TYEYYCTPHYEAGMVGTII 97 (99)
T ss_dssp EEEEEETTTGGTTSEEEEE
T ss_pred EEEEEcCCCcccCCEEEEE
Confidence 999999643 234445443
|
The most well known members of this class of proteins are the plant chloroplastic plastocyanins, which exchange electrons with cytochrome c6, and the distantly related bacterial azurins, which exchange electrons with cytochrome c551. This family of proteins also includes amicyanin from bacteria such as Methylobacterium extorquens or Paracoccus versutus (Thiobacillus versutus) that can grow on methylamine; auracyanins A and B from Chloroflexus aurantiacus []; blue copper protein from Alcaligenes faecalis; cupredoxin (CPC) from Cucumis sativus (Cucumber) peelings []; cusacyanin (basic blue protein; plantacyanin, CBP) from cucumber; halocyanin from Natronomonas pharaonis (Natronobacterium pharaonis) [], a membrane associated copper-binding protein; pseudoazurin from Pseudomonas; rusticyanin from Thiobacillus ferrooxidans []; stellacyanin from Rhus vernicifera (Japanese lacquer tree); umecyanin from the roots of Armoracia rusticana (Horseradish); and allergen Ra3 from ragweed. This pollen protein is evolutionary related to the above proteins, but seems to have lost the ability to bind copper. Although there is an appreciable amount of divergence in the sequences of all these proteins, the copper ligand sites are conserved.; GO: 0005507 copper ion binding, 0009055 electron carrier activity; PDB: 1UAT_A 1CUO_A 1PLC_A 4PCY_A 3PCY_A 1PND_A 1PNC_A 1JXG_A 6PCY_A 1TKW_A .... |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.74 Score=40.58 Aligned_cols=76 Identities=20% Similarity=0.247 Sum_probs=53.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEec--c----cceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIE--K----HQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLY 339 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~--g----h~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y 339 (445)
...+.++.|+++|+-+.|.+... +.|.+. + |.-..+.+| ..+-.....+.|.||++-.+++.+.+ +|.|
T Consensus 62 p~~~~v~aG~tv~~v~~n~~el~--hef~~~~~~~~~~~~~~~~~~~--Dme~d~~~~v~L~PG~s~elvv~ft~-~g~y 136 (158)
T COG4454 62 PSSFEVKAGETVRFVLKNEGELK--HEFTMDAPDKNLEHVTHMILAD--DMEHDDPNTVTLAPGKSGELVVVFTG-AGKY 136 (158)
T ss_pred CCcccccCCcEEeeeecCcccce--EEEeccCccccchhHHHhhhCC--ccccCCcceeEeCCCCcEEEEEEecC-CccE
Confidence 44789999999999999999654 444444 1 211122223 11223457899999999999999987 7999
Q ss_pred EEEEEec
Q psy16562 340 WMQAKTL 346 (445)
Q Consensus 340 ~~~~~~~ 346 (445)
.+.|...
T Consensus 137 e~~C~iP 143 (158)
T COG4454 137 EFACNIP 143 (158)
T ss_pred EEEecCC
Confidence 9988654
|
|
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=92.10 E-value=1.7 Score=37.00 Aligned_cols=61 Identities=13% Similarity=0.249 Sum_probs=47.2
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..+.++.|+.++|++.+... .+.|+|...++. +.+-||+.-.+.+++++ +|.|+++|.-.
T Consensus 46 ~~l~lp~g~~v~~~ltS~DV---iHsf~ip~~~~k----------------~d~~PG~~~~~~~~~~~-~G~y~~~C~e~ 105 (120)
T PF00116_consen 46 NELVLPAGQPVRFHLTSEDV---IHSFWIPELGIK----------------MDAIPGRTNSVTFTPDK-PGTYYGQCAEY 105 (120)
T ss_dssp SEEEEETTSEEEEEEEESSS----EEEEETTCTEE----------------EEEBTTCEEEEEEEESS-SEEEEEEE-SS
T ss_pred ceecccccceEeEEEEcCCc---cccccccccCcc----------------cccccccceeeeeeecc-CCcEEEcCccc
Confidence 47999999999999999764 356667655443 34578888889999987 89999999877
Q ss_pred C
Q psy16562 347 C 347 (445)
Q Consensus 347 ~ 347 (445)
|
T Consensus 106 C 106 (120)
T PF00116_consen 106 C 106 (120)
T ss_dssp S
T ss_pred c
Confidence 6
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF00116 COX2: Cytochrome C oxidase subunit II, periplasmic domain This family corresponds to chains b and o | Back alignment and domain information |
|---|
Probab=90.74 E-value=1.6 Score=37.01 Aligned_cols=72 Identities=14% Similarity=0.244 Sum_probs=49.3
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--c-h
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--G-L 185 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~-~ 185 (445)
.+.|.+..|++|++.+++..- - ||...+.. | + +.-+-||..-...|+++++|+|++.|.- | .
T Consensus 45 ~~~l~lp~g~~v~~~ltS~DV--i-----Hsf~ip~~----~---~-k~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~g 109 (120)
T PF00116_consen 45 DNELVLPAGQPVRFHLTSEDV--I-----HSFWIPEL----G---I-KMDAIPGRTNSVTFTPDKPGTYYGQCAEYCGAG 109 (120)
T ss_dssp SSEEEEETTSEEEEEEEESSS--------EEEEETTC----T---E-EEEEBTTCEEEEEEEESSSEEEEEEE-SSSSTT
T ss_pred cceecccccceEeEEEEcCCc--c-----cccccccc----C---c-ccccccccceeeeeeeccCCcEEEcCccccCcC
Confidence 468999999999999999753 2 45544321 1 1 1236789999999999999999999984 3 2
Q ss_pred hhhcCceeEEEE
Q psy16562 186 QKMDGLEGSMII 197 (445)
Q Consensus 186 q~~~Gl~G~lIV 197 (445)
|. -|.|-++|
T Consensus 110 H~--~M~~~v~V 119 (120)
T PF00116_consen 110 HS--FMPGKVIV 119 (120)
T ss_dssp GG--G-EEEEEE
T ss_pred cC--CCeEEEEE
Confidence 22 25565554
|
; InterPro: IPR002429 Cytochrome c oxidase (1.9.3.1 from EC) [, ] is an oligomeric enzymatic complex which is a component of the respiratory chain and is involved in the transfer of electrons from cytochrome c to oxygen. In eukaryotes this enzyme complex is located in the mitochondrial inner membrane; in aerobic prokaryotes it is found in the plasma membrane. The number of polypeptides in the complex ranges from 3-4 (prokaryotes), up to 13(mammals). Subunit 2 (CO II) transfers the electrons from cytochrome c to the catalytic subunit 1. It contains two adjacent transmembrane regions in its N terminus and the major part of the protein is exposed to the periplasmic or to the mitochondrial intermembrane space, respectively. CO II provides the substrate-binding site and contains a copper centre called Cu(A), probably the primary acceptor in cytochrome c oxidase. An exception is the corresponding subunit of the cbb3-type oxidase which lacks the copper A redox-centre. Several bacterial CO II have a C-terminal extension that contains a covalently bound haem c.; GO: 0004129 cytochrome-c oxidase activity, 0005507 copper ion binding, 0016020 membrane; PDB: 3OMN_D 3OMA_B 3OMI_D 3OM3_B 3EHB_B 1AR1_B 1QLE_B 3HB3_B 2IWK_B 2IWF_A .... |
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
Probab=90.33 E-value=2.2 Score=33.66 Aligned_cols=65 Identities=15% Similarity=0.216 Sum_probs=32.3
Q ss_pred EEEEEEccCCCceeEEEEe-cccceE--EEccCCCcce--------eeEecEEEecCCceEEEEEecCCC---CceEEEE
Q psy16562 277 YLMRIIGGSCLACPLIFTI-EKHQLQ--VIASDGTAVE--------PLVVDSVTLFPGDRVDVIIHTNQS---NNLYWMQ 342 (445)
Q Consensus 277 ~rlRliN~~~~~~~~~~~i-~gh~~~--via~DG~~v~--------P~~~~~~~I~pGeR~dv~v~~~~~---~G~y~~~ 342 (445)
+.|.+.|.+... +.|.+ .|+.+. |...+|..+- ........|.|||...+..+.+.. +|+|.+.
T Consensus 4 ~~l~v~N~s~~~--v~l~f~sgq~~D~~v~d~~g~~vwrwS~~~~FtQal~~~~l~pGe~~~~~~~~~~~~~~~G~Y~~~ 81 (82)
T PF12690_consen 4 FTLTVTNNSDEP--VTLQFPSGQRYDFVVKDKEGKEVWRWSDGKMFTQALQEETLEPGESLTYEETWDLKDLSPGEYTLE 81 (82)
T ss_dssp EEEEEEE-SSS---EEEEESSS--EEEEEE-TT--EEEETTTT-------EEEEE-TT-EEEEEEEESS----SEEEEEE
T ss_pred EEEEEEeCCCCe--EEEEeCCCCEEEEEEECCCCCEEEEecCCchhhheeeEEEECCCCEEEEEEEECCCCCCCceEEEe
Confidence 455666666542 33333 344332 2333454431 123467899999999999988764 6999875
Q ss_pred E
Q psy16562 343 A 343 (445)
Q Consensus 343 ~ 343 (445)
+
T Consensus 82 a 82 (82)
T PF12690_consen 82 A 82 (82)
T ss_dssp E
T ss_pred C
Confidence 4
|
It inhibits ISP-1 in the early stages of sporulation and then may be inactivated by a membrane-bound proteinase [].; PDB: 3ISY_A. |
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
Probab=89.41 E-value=1.7 Score=36.79 Aligned_cols=74 Identities=8% Similarity=0.117 Sum_probs=41.8
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAK 344 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~ 344 (445)
....|+|++|++|+|...+.+ +.... +.+. .-|| .+.+...+|+.|++.| ++ +|+|-|.|.
T Consensus 13 ~P~~v~V~~GdTV~f~n~d~~---Hnv~~-~~~~-----~p~g-------~~~~~s~~g~~~~~tF--~~-~G~Y~Y~C~ 73 (116)
T TIGR02375 13 EPAYIRAAPGDTVTFVPTDKG---HNVET-IKGM-----IPEG-------AEAFKSKINEEYTVTV--TE-EGVYGVKCT 73 (116)
T ss_pred eCCEEEECCCCEEEEEECCCC---eeEEE-ccCC-----CcCC-------cccccCCCCCEEEEEe--CC-CEEEEEEcC
Confidence 346899999999999887753 21110 1110 0022 1223334677776665 44 799999997
Q ss_pred ec-CCCceeeEEEEEc
Q psy16562 345 TL-CDSITAEAVLQYE 359 (445)
Q Consensus 345 ~~-~~~~~~~ail~y~ 359 (445)
.. ..++. +.|.+.
T Consensus 74 pH~~~GM~--G~V~Vg 87 (116)
T TIGR02375 74 PHYGMGMV--ALIQVG 87 (116)
T ss_pred CCccCCCE--EEEEEC
Confidence 65 33343 444443
|
Pseudoazurin, also called cupredoxin, is a small, blue periplasmic protein with a single bound copper atom. Pseudoazurin is related plastocyanins. Several examples of pseudoazurin are encoded by a neighboring gene for, or have been shown to transfer electrons to, copper-containing nitrite reductases (TIGR02376) of the same species. |
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=89.29 E-value=2.1 Score=36.85 Aligned_cols=70 Identities=9% Similarity=0.009 Sum_probs=44.5
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...++|++|++|+| +|..... ++. .+.++. .|.....+.-.+++.|.+.|+. +|.|.|.|..
T Consensus 53 PA~v~v~pGDTVtw--~~~d~~~--Hnv---------~~~~~~--~~~g~~~~~~~~~~s~~~Tfe~---~G~Y~Y~C~P 114 (128)
T COG3794 53 PAEVTVKPGDTVTW--VNTDSVG--HNV---------TAVGGM--DPEGSGTLKAGINESFTHTFET---PGEYTYYCTP 114 (128)
T ss_pred CcEEEECCCCEEEE--EECCCCC--ceE---------EEeCCC--CcccccccccCCCcceEEEecc---cceEEEEecc
Confidence 45899999999877 5555432 222 222221 2344566666777888887765 7999999977
Q ss_pred c-CCCceee
Q psy16562 346 L-CDSITAE 353 (445)
Q Consensus 346 ~-~~~~~~~ 353 (445)
. ..++.+.
T Consensus 115 H~~~gM~G~ 123 (128)
T COG3794 115 HPGMGMKGK 123 (128)
T ss_pred CCCCCcEEE
Confidence 5 3444444
|
|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
Probab=88.55 E-value=1.4 Score=34.58 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=38.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|++++|+++.| .|.... ++++.+... .++ ........+.+|+.|.+.+ ++ +|.|-|+|..
T Consensus 10 P~~i~v~~GdtVt~--~N~d~~--~Hnv~~~~g------~~~----~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C~~ 72 (83)
T TIGR02657 10 TPELHVKVGDTVTW--INREAM--PHNVHFVAG------VLG----EAALKGPMMKKEQAYSLTF--TE-AGTYDYHCTP 72 (83)
T ss_pred CCEEEECCCCEEEE--EECCCC--CccEEecCC------CCc----cccccccccCCCCEEEEEC--CC-CEEEEEEcCC
Confidence 46899999999987 466543 233222110 111 1111223468899999766 34 7999999865
Q ss_pred c
Q psy16562 346 L 346 (445)
Q Consensus 346 ~ 346 (445)
.
T Consensus 73 H 73 (83)
T TIGR02657 73 H 73 (83)
T ss_pred C
Confidence 3
|
Members of this family are amicyanin, a type I blue copper protein that accepts electrons from the tryptophan tryptophylquinone (TTQ) cofactor of the methylamine dehydrogenase light chain and then transfers them to the heme group of cytochrome c-551i. Amicyanin, methylamine dehydrogenase, and cytochrome c-551i are periplasmic and form a complex. This system has been studied primarily in Paracoccus denitrificans and Methylobacterium extorquens. Related type I blue copper proteins include plastocyanin, pseudoazurin, halocyanin, etc. |
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
Probab=87.98 E-value=3.7 Score=34.62 Aligned_cols=73 Identities=7% Similarity=0.009 Sum_probs=43.4
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
+....|+|++|++|+|.--..+. ++.+. +.++.. .....+.+.+|++|++.|+ + +|.|-|+|
T Consensus 39 F~P~~ltV~~GdTVtw~~~~d~~---~HnV~---------s~~~~~---f~s~~~~~~~G~t~s~Tf~--~-~G~Y~Y~C 100 (115)
T TIGR03102 39 FDPPAIRVDPGTTVVWEWTGEGG---GHNVV---------SDGDGD---LDESERVSEEGTTYEHTFE--E-PGIYLYVC 100 (115)
T ss_pred EeCCEEEECCCCEEEEEECCCCC---CEEEE---------ECCCCC---ccccccccCCCCEEEEEec--C-CcEEEEEc
Confidence 33468999999999975433221 22322 222211 1123345678999999884 3 79999999
Q ss_pred Eec-CCCceeeE
Q psy16562 344 KTL-CDSITAEA 354 (445)
Q Consensus 344 ~~~-~~~~~~~a 354 (445)
... ..++.+..
T Consensus 101 ~pH~~~gM~G~I 112 (115)
T TIGR03102 101 VPHEALGMKGAV 112 (115)
T ss_pred cCCCCCCCEEEE
Confidence 765 23444443
|
Halocyanins are blue (type I) copper redox proteins found in halophilic archaea such as Natronobacterium pharaonis. This model represents a domain duplicated in some halocyanins, while appearing once in others. This domain includes the characteristic copper ligand residues. This family does not include plastocyanins, and does not include certain divergent paralogs of halocyanin. |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=85.70 E-value=5.4 Score=34.03 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCeEEEEcC-CEEEEEEEecCCCCCceEeeCCcccCCCCCCC---------C-----CC----cc--cccCCCCCCceEE
Q psy16562 109 GPSIQVCKG-DTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD---------G-----VP----MV--TQCPIPSSTTFRY 167 (445)
Q Consensus 109 GPtI~v~~G-D~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~D---------G-----vp----~~--tq~pI~pG~~~~Y 167 (445)
-..|.|..+ ..|.|+|.|... .+-..--|.+-.....-++ | +| .+ .-.-|.||++-+.
T Consensus 15 ~~~i~V~a~~k~vtv~l~h~G~-lpk~~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~sv 93 (125)
T TIGR02695 15 TKSISVPKSCKEFTVNLKHTGK-LPKAVMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKTSV 93 (125)
T ss_pred ccEEEEcCCCcEEEEEEecCCc-CchhccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceEEE
Confidence 357888874 789999999743 2222222322111100011 1 11 11 1123789999999
Q ss_pred EEecC--CCcc-eEEecccchhhhcCceeEEE
Q psy16562 168 KFPAM--PSGT-FFYHSHVGLQKMDGLEGSMI 196 (445)
Q Consensus 168 ~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lI 196 (445)
.|+++ ++|+ |-|-|-...|.. .|.|.|.
T Consensus 94 tF~~~~l~~g~~Y~f~CSFPGH~~-~MkG~l~ 124 (125)
T TIGR02695 94 TFDVSKLSAGEDYTFFCSFPGHWA-MMRGTVK 124 (125)
T ss_pred EEECCCCCCCCcceEEEcCCCcHH-hceEEEe
Confidence 99987 6886 999999876665 6888775
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
Probab=84.69 E-value=9.4 Score=32.59 Aligned_cols=76 Identities=16% Similarity=0.224 Sum_probs=50.1
Q ss_pred ceEEEec-CcEEEEEEEccCCCceeEEEEecccceEEE--------c-------cCCCccee----eEecEEEecCCceE
Q psy16562 267 HFFKVQR-DKRYLMRIIGGSCLACPLIFTIEKHQLQVI--------A-------SDGTAVEP----LVVDSVTLFPGDRV 326 (445)
Q Consensus 267 ~~i~v~~-G~~~rlRliN~~~~~~~~~~~i~gh~~~vi--------a-------~DG~~v~P----~~~~~~~I~pGeR~ 326 (445)
..|+|++ ++.+.+.|.|.+... -. .=+|.+-+. + .|-.++++ +...+-.|.+||..
T Consensus 16 ~~i~V~a~~k~vtv~l~h~G~lp--k~--~MgHN~Vl~k~~d~~~v~~~g~~ag~~~~Yvp~~d~~ViAhTkliggGes~ 91 (125)
T TIGR02695 16 KSISVPKSCKEFTVNLKHTGKLP--KA--VMGHNWVLAKSADMQAVATDGMSAGADNNYVKPGDARVIAHTKVIGGGEKT 91 (125)
T ss_pred cEEEEcCCCcEEEEEEecCCcCc--hh--ccCccEEEeccccHHHHHHHHHhcccccCccCCCCcceEEEccccCCCceE
Confidence 4899998 489999999998532 00 123333222 1 24455643 23466789999999
Q ss_pred EEEEecCC-CCc-eEEEEEEec
Q psy16562 327 DVIIHTNQ-SNN-LYWMQAKTL 346 (445)
Q Consensus 327 dv~v~~~~-~~G-~y~~~~~~~ 346 (445)
++.|+++. .+| +|.+.|.-.
T Consensus 92 svtF~~~~l~~g~~Y~f~CSFP 113 (125)
T TIGR02695 92 SVTFDVSKLSAGEDYTFFCSFP 113 (125)
T ss_pred EEEEECCCCCCCCcceEEEcCC
Confidence 99999874 356 599888543
|
Azurin is a blue copper-binding protein in the plastocyanin/azurin family (see Pfam model pfam00127). It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The most closely related copper-binding proteins to this family are auracyanins, as in Chloroflexus aurantiacus, which have similar redox activities. |
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
Probab=83.51 E-value=10 Score=34.52 Aligned_cols=77 Identities=9% Similarity=0.091 Sum_probs=50.1
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEe--ccc---ceEEEccCCCcce-eeEecE----EEecCCceEEEEEecCCCC
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTI--EKH---QLQVIASDGTAVE-PLVVDS----VTLFPGDRVDVIIHTNQSN 336 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i--~gh---~~~via~DG~~v~-P~~~~~----~~I~pGeR~dv~v~~~~~~ 336 (445)
++|-+..|-++.+.++|..... +++-| .+- .--.++.||..+. +-.... --|.+|++....++.-+ +
T Consensus 85 mtIyiPaGw~V~V~f~N~e~~p--Hnl~iv~n~t~~P~~~~~s~dgkil~~vG~~~s~~~~NGi~~Gqs~sg~~~~~~-~ 161 (195)
T TIGR03094 85 MTIYLPAGWNVYVTFTNYESLP--HNLKLLPNSTQTPRGPIWAHTGKIINSTGATTSIYYGNGISSGHSRSGWWNDTS-A 161 (195)
T ss_pred eEEEEeCCCEEEEEEEcCCCCC--ccEEEecCCCCCCCccccccCceeEeecccccCccccccccccceeEEEeccCC-C
Confidence 6899999999999999999653 44433 111 1122455775542 211211 23568899887777665 8
Q ss_pred ceEEEEEEec
Q psy16562 337 NLYWMQAKTL 346 (445)
Q Consensus 337 G~y~~~~~~~ 346 (445)
|.||+.|.-.
T Consensus 162 G~YwlvCgip 171 (195)
T TIGR03094 162 GKYWLVCGIT 171 (195)
T ss_pred eeEEEEcccC
Confidence 9999998554
|
Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus. The most closely related proteins characterized as functionally different are the rustacyanins. |
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.66 E-value=4.4 Score=35.82 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=64.2
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccC-----------CCCCCCCCCcccccCCCCCCceEEEEecCCC
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQK-----------VTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS 174 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~-----------~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~ 174 (445)
.|++-.++++.|.+++..+.|... ..|=-.+.+. ..+.|++-.. .---+.||+|-+..|..+.+
T Consensus 59 ~f~p~~~~v~aG~tv~~v~~n~~e----l~hef~~~~~~~~~~~~~~~~~~~Dme~d~~-~~v~L~PG~s~elvv~ft~~ 133 (158)
T COG4454 59 SFKPSSFEVKAGETVRFVLKNEGE----LKHEFTMDAPDKNLEHVTHMILADDMEHDDP-NTVTLAPGKSGELVVVFTGA 133 (158)
T ss_pred ccCCCcccccCCcEEeeeecCccc----ceEEEeccCccccchhHHHhhhCCccccCCc-ceeEeCCCCcEEEEEEecCC
Confidence 467788999999999988888754 2232222211 1112333211 11248999999999999999
Q ss_pred cceEEecccchhhhcCceeEEEEe
Q psy16562 175 GTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 175 GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
|.|-.-|-...|+..||.|-|.|.
T Consensus 134 g~ye~~C~iPGHy~AGM~g~itV~ 157 (158)
T COG4454 134 GKYEFACNIPGHYEAGMVGEITVS 157 (158)
T ss_pred ccEEEEecCCCcccCCcEEEEEeC
Confidence 999999999999999999999885
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 445 | ||||
| 2hzh_A | 499 | Crystal Structure Of Laccase From Coriolus Zonatus | 6e-44 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 8e-44 | ||
| 2qt6_A | 498 | Crystal Structure Determination Of A Blue Laccase F | 1e-05 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 1e-43 | ||
| 1gyc_A | 499 | Crystal Structure Determination At Room Temperature | 6e-05 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 9e-43 | ||
| 3kw7_A | 502 | Crystal Structure Of Lacb From Trametes Sp. Ah28-2 | 4e-04 | ||
| 3fpx_A | 499 | Native Fungus Laccase From Trametes Hirsuta Length | 1e-41 | ||
| 3pxl_A | 499 | Type-2 Cu-Depleted Fungus Laccase From Trametes Hir | 1e-41 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 1e-41 | ||
| 1a65_A | 504 | Type-2 Cu-depleted Laccase From Coprinus Cinereus L | 7e-04 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 1e-41 | ||
| 1hfu_A | 503 | Type-2 Cu-Depleted Laccase From Coprinus Cinereus A | 7e-04 | ||
| 1kya_A | 499 | Active Laccase From Trametes Versicolor Complexed W | 3e-41 | ||
| 3div_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 5e-41 | ||
| 4a2f_A | 497 | Coriolopsis Gallica Laccase Collected At 12.65 Kev | 8e-40 | ||
| 4a2d_A | 496 | Coriolopsis Gallica Laccase T2 Copper Depleted At P | 8e-40 | ||
| 2hrg_A | 496 | Crystal Structure Of Blue Laccase From Trametes Tro | 2e-39 | ||
| 2xyb_A | 497 | Crystal Structure Of A Fully Functional Laccase Fro | 5e-38 | ||
| 2h5u_A | 499 | Crystal Structure Of Laccase From Cerrena Maxima At | 6e-38 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 7e-38 | ||
| 3t6v_A | 495 | Crystal Structure Of Laccase From Steccherinum Ochr | 4e-04 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 3e-37 | ||
| 1v10_A | 521 | Structure Of Rigidoporus Lignosus Laccase From Hemi | 9e-06 | ||
| 1aoz_A | 552 | Refined Crystal Structure Of Ascorbate Oxidase At 1 | 1e-36 | ||
| 3sqr_A | 580 | Crystal Structure Of Laccase From Botrytis Aclada A | 3e-35 | ||
| 3v9e_A | 580 | Structure Of The L513m Mutant Of The Laccase From B | 3e-35 | ||
| 1zpu_A | 534 | Crystal Structure Of Fet3p, A Multicopper Oxidase T | 6e-26 | ||
| 3dkh_A | 559 | L559a Mutant Of Melanocarpus Albomyces Laccase Leng | 3e-25 | ||
| 1gw0_A | 559 | Crystal Structure Of Laccase From Melanocarpus Albo | 3e-25 | ||
| 2q9o_A | 559 | Near-Atomic Resolution Structure Of A Melanocarpus | 8e-25 | ||
| 3pps_A | 604 | Crystal Structure Of An Ascomycete Fungal Laccase F | 8e-23 | ||
| 3g5w_A | 318 | Crystal Structure Of Blue Copper Oxidase From Nitro | 9e-21 | ||
| 3zx1_A | 481 | Multicopper Oxidase From Campylobacter Jejuni: A Me | 1e-13 | ||
| 2xu9_A | 439 | Crystal Structure Of Laccase From Thermus Thermophi | 5e-12 | ||
| 3gdc_A | 288 | Crystal Structure Of Multicopper Oxidase Length = 2 | 3e-08 | ||
| 3nsy_A | 511 | The Multi-Copper Oxidase Cueo With Six Met To Ser M | 2e-07 | ||
| 2yxv_A | 446 | The Deletion Mutant Of Multicopper Oxidase Cueo Len | 2e-07 | ||
| 1pf3_A | 498 | Crystal Structure Of The M441l Mutant Of The Multic | 2e-07 | ||
| 3qqx_A | 505 | Reduced Native Intermediate Of The Multicopper Oxid | 2e-07 | ||
| 3nsc_A | 505 | C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | 2e-07 | ||
| 1kv7_A | 488 | Crystal Structure Of Cueo, A Multi-Copper Oxidase F | 2e-07 | ||
| 3nsf_A | 505 | Apo Form Of The Multicopper Oxidase Cueo Length = 5 | 3e-07 | ||
| 3uaa_A | 489 | Multicopper Oxidase Cueo Mutant C500se506q (Data1) | 3e-07 | ||
| 3tas_A | 313 | Small Laccase From Streptomyces Viridosporus T7a Le | 4e-04 | ||
| 4gy4_A | 278 | Role Of The Biradical Intermediate Observed During | 7e-04 | ||
| 3cg8_A | 343 | Laccase From Streptomyces Coelicolor Length = 343 | 7e-04 |
| >pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6 A Resolution Length = 499 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus Length = 498 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions Length = 499 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2 Length = 502 | Back alignment and structure |
|
| >pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta Length = 499 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus Length = 504 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68 A Resolution Length = 503 | Back alignment and structure |
|
| >pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With 2,5-Xylidine Length = 499 | Back alignment and structure |
|
| >pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev Length = 497 | Back alignment and structure |
|
| >pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 Length = 496 | Back alignment and structure |
|
| >pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate Length = 496 | Back alignment and structure |
|
| >pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The Ligninolytic Fungus Pycnoporus Cinnabarinus Length = 497 | Back alignment and structure |
|
| >pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a Resolution Length = 499 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum Length = 495 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From Hemihedrally Twinned Crystals Length = 521 | Back alignment and structure |
|
| >pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9 Angstroms Resolution Length = 552 | Back alignment and structure |
|
| >pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution Length = 580 | Back alignment and structure |
|
| >pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada Length = 580 | Back alignment and structure |
|
| >pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That Functions In Iron Import Length = 534 | Back alignment and structure |
|
| >pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces In Four Copper Form Length = 559 | Back alignment and structure |
|
| >pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus Albomyces Laccase Length = 559 | Back alignment and structure |
|
| >pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From Thielavia Arenaria Length = 604 | Back alignment and structure |
|
| >pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas Europaea Length = 318 | Back alignment and structure |
|
| >pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A Metallo-Oxidase Length = 481 | Back alignment and structure |
|
| >pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus Hb27 Length = 439 | Back alignment and structure |
|
| >pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase Length = 288 | Back alignment and structure |
|
| >pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser Mutations (M358s, M361s,M362s,M364s,M366s,M368s) Length = 511 | Back alignment and structure |
|
| >pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo Length = 446 | Back alignment and structure |
|
| >pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper Oxidase Cueo Length = 498 | Back alignment and structure |
|
| >pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii) Length = 505 | Back alignment and structure |
|
| >pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E. Coli Involved In Copper Homeostasis Length = 488 | Back alignment and structure |
|
| >pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo Length = 505 | Back alignment and structure |
|
| >pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1) Length = 489 | Back alignment and structure |
|
| >pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a Length = 313 | Back alignment and structure |
|
| >pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The Turnover Of Slac: A Two-Domain Laccase From Streptomyces Coelicolor Length = 278 | Back alignment and structure |
|
| >pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor Length = 343 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 445 | |||
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 1e-107 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 7e-15 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 1e-105 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 1e-15 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 1e-105 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 1e-13 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 1e-103 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 2e-13 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 1e-103 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 5e-13 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 1e-101 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 7e-14 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 1e-99 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 3e-14 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 2e-90 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 1e-13 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 1e-83 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 6e-08 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 4e-83 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 7e-08 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 4e-58 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 3e-46 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 7e-46 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 5e-43 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 2e-41 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 3e-38 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 4e-36 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 5e-31 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 1e-30 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 9e-30 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 8e-29 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 2e-28 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 4e-28 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 3e-24 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 4e-04 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-26 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-25 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 1e-19 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 2e-05 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 2e-24 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 7e-24 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 8e-10 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 9e-22 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 4e-21 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 3e-17 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 9e-16 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 2e-15 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 1e-09 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 1e-05 |
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 328 bits (843), Expect = e-107
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 28/328 (8%)
Query: 43 NNLCARPC-DNAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAI 100
N R C + + Y + + + + + + DG + +
Sbjct: 5 NTPSNRACWSDGFDINTDYEVSTPDTGVTQSYVFNLTEVD-------NWMGPDGVVKEKV 57
Query: 101 LSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI- 159
+ IN + GP+I GDT+ V V N+++ ++HWHG+ QK T DG VT+CPI
Sbjct: 58 MLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIP 117
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVI 219
P Y++ A GT +YHSH Q +G+ G++ I P + YD DL V
Sbjct: 118 PKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQIN-----GPASLPYDIDL--GVF 170
Query: 220 IVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLM 279
+TD+ + D N D +LING NP N+ + KR+ +
Sbjct: 171 PITDYYYRAADDLVHFTQNNAPPF-SDNVLINGTAVNP--NTGEGQYANVTLTPGKRHRL 227
Query: 280 RIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLY 339
RI+ S ++ H + VIA+D V + VDS+ L G R DV+I +++ + Y
Sbjct: 228 RILNTSTE-NHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNY 286
Query: 340 WMQAKTLCDS-------ITAEAVLQYEG 360
W + A+ Y G
Sbjct: 287 WFNVTFGGQAACGGSLNPHPAAIFHYAG 314
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* Length = 559 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 7e-15
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 370 PKSDSF-PRGKPKD-NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA 427
P SD+ G + N+ + KR+ +RI+ S ++ H + VIA
Sbjct: 193 PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTE-NHFQVSLVNHTMTVIA 251
Query: 428 SDGTAVEPLVVDSVTLFP 445
+D V + VDS+ L
Sbjct: 252 ADMVPVNAMTVDSLFLAV 269
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 320 bits (823), Expect = e-105
Identities = 90/282 (31%), Positives = 137/282 (48%), Gaps = 19/282 (6%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
+ DGF R ++ PGP I GD + N +I+ + ++HWHG +QK
Sbjct: 14 ADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKG 73
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
T W DG +TQCPI +F Y F +GT++YHSH+ Q DGL G ++ P
Sbjct: 74 TNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN-- 131
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DP A LYD D + +I + DW H + G I D+ LI+G + + +
Sbjct: 132 DPDANLYDVDDDTTIITLADWYHVLAKEMGAGGA-----ITADSTLIDGLGRTHVNVAA- 185
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
VP+ V+ KRY MR++ SC F+I+ H + +I +DG + L VD + +F
Sbjct: 186 VPLSVITVEVGKRYRMRLVSISCDP-NYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAA 244
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLC-----DSITAEAVLQYEG 360
R +++ NQ YW++A D A+L+Y+G
Sbjct: 245 QRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDG 286
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* Length = 495 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 370 PKSDSF---PRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 426
+DS G+ N VP+ V+ KRY MR++ SC F+I+ H + +I
Sbjct: 166 ITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDP-NYDFSIDGHDMTII 224
Query: 427 ASDGTAVEPLVVDSVTLFP 445
+DG + L VD + +F
Sbjct: 225 ETDGVDSQELTVDEIQIFA 243
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 319 bits (820), Expect = e-105
Identities = 94/310 (30%), Positives = 144/310 (46%), Gaps = 25/310 (8%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE----VTLHWHGVYQKV 144
V+ DGF R + +N PGP + GD ++V +++ + ++HWHG +Q
Sbjct: 13 AAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHG 72
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
T W DG + QCPI +F Y F +GTF+YHSH+ Q DGL G ++ P
Sbjct: 73 TNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN-- 130
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPHA YD D VI + DW H+ DA LING+ + P +
Sbjct: 131 DPHASRYDVDNDDTVITLADWYHTAAKLGPRFPG------GADATLINGKGRAP--SDSV 182
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ KV + KRY R++ SC F+I+ H L +I D +PL VDS+ +F
Sbjct: 183 AELSVIKVTKGKRYRFRLVSLSCNP-NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAA 241
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEGEKLTYVSKRPKSDSFPRG 378
R ++ NQ+ + YW++A ++ A+L+Y+G + P ++
Sbjct: 242 QRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAP----AVEPTTNQTTSV 297
Query: 379 KPKDNSPRVP 388
KP + P
Sbjct: 298 KPLNEVDLHP 307
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* Length = 499 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 370 PKSDSFP-RGKPK-DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA 427
+D+ GK + + + KV + KRY R++ SC F+I+ H L +I
Sbjct: 164 GGADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNP-NHTFSIDGHNLTIIE 222
Query: 428 SDGTAVEPLVVDSVTLFP 445
D +PL VDS+ +F
Sbjct: 223 VDSVNSQPLEVDSIQIFA 240
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 316 bits (813), Expect = e-103
Identities = 87/291 (29%), Positives = 137/291 (47%), Gaps = 26/291 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ E ++ IN Q PGP+I+ GD+++V++ N + V +HWHG+ Q+ TPW DG
Sbjct: 15 WAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADG 74
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELY 210
++QC I TF Y F GTFFYH H+G+Q+ GL GS+I+ P E +
Sbjct: 75 TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPP---QGKKEPF 131
Query: 211 DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQ------------- 255
+D ++++DW H + G + R +P IL+NG+ Q
Sbjct: 132 HYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNL 190
Query: 256 --NPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL 313
S + F V K Y +RI + L L F I HQL V+ +DG V+P
Sbjct: 191 EPCKLKGSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPF 249
Query: 314 VVDSVTLFPGDRVDVIIHTNQS-NNLYWMQAKTLC---DSITAEAVLQYEG 360
+ ++ G+ V+I T+Q+ + YW+ T ++ +L Y
Sbjct: 250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLP 300
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* Length = 552 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 380 PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVD 439
S + F V K Y +RI + L L F I HQL V+ +DG V+P
Sbjct: 194 KLKGSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTS 252
Query: 440 SVTLFP 445
+ ++
Sbjct: 253 DIDIYS 258
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 96/336 (28%), Positives = 143/336 (42%), Gaps = 40/336 (11%)
Query: 46 CARPCDN-AKPLVCYYSFTLE-NYATVGPACADCLKGNQKACRRK-------GCVTADGF 96
C N A C+ ++++ N+ V P R+ +T DG+
Sbjct: 35 TTASCANSATSRSCWGEYSIDTNWYDVTPT----------GVTREYWLSVENSTITPDGY 84
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
R+ ++ N +PGP+I GD +I+ V N++ ++HWHG+ Q + DGVP VTQ
Sbjct: 85 TRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQ 144
Query: 157 CPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYS 216
CPI T YKF GT +YHSH LQ DGL G +II P TAD YD D+
Sbjct: 145 CPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-----YDEDV-- 197
Query: 217 HVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSP------RVPMHFFK 270
VI + DW H + + L+NG N S
Sbjct: 198 GVIFLQDWAHESVFEIWDTARLGAPPA-LENTLMNGTNTFDCSASTDPNCVGGGKKFELT 256
Query: 271 VQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330
+Y +R+I + F I+ H L VIA+D + P D++ + G R DVI+
Sbjct: 257 FVEGTKYRLRLINVGIDS-HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIV 315
Query: 331 HTNQSNNLYWMQAKTLCDSI------TAEAVLQYEG 360
N + + YW++ A +L+Y+
Sbjct: 316 EANAAADNYWIRGNWGTTCSTNNEAANATGILRYDS 351
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} Length = 580 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 5e-13
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 392 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445
+Y +R+I + F I+ H L VIA+D + P D++ +
Sbjct: 255 LTFVEGTKYRLRLINVGIDS-HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGI 307
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 309 bits (794), Expect = e-101
Identities = 95/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)
Query: 91 VTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE----VTLHWHGVYQKVT 145
+ DG R+ ++ P I D ++V + + D ++HWHG +Q T
Sbjct: 35 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGT 94
Query: 146 PWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
MDG V QCPI + +F Y F +GT++YHSH+ Q DGL G+ ++ P D
Sbjct: 95 TEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--D 152
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
PH LYD D S VI + DW HS++ FP PD LING +N + S
Sbjct: 153 PHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKAPP--APDTTLINGLGRNSANPSAG- 209
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
+ VQ KRY RI+ SC F+I+ H++ VI DG + +PL VDS+T+F G
Sbjct: 210 QLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQ 268
Query: 325 RVDVIIHTNQSNNLYWMQAK--TLCDSI---TAEAVLQYEG 360
R V++ NQ+ YW++A + A+ +Y+G
Sbjct: 269 RYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQG 309
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 Length = 521 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 7e-14
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 370 PKSDSF---PRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 426
P D+ G+ N + VQ KRY RI+ SC F+I+ H++ VI
Sbjct: 189 PAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVI 247
Query: 427 ASDGTAVEPLVVDSVTLFP 445
DG + +PL VDS+T+F
Sbjct: 248 EVDGVSHQPLTVDSLTIFA 266
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 306 bits (785), Expect = 1e-99
Identities = 101/286 (35%), Positives = 142/286 (49%), Gaps = 27/286 (9%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE----VTLHWHGVYQKV 144
V+ DGF RA + +N GP I+ K D ++V N + + ++HWHG++Q+
Sbjct: 14 ANVSPDGFTRAGILVNGV-HGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG 72
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKF-PAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
T W DG V QCPI F YKF PA +GTF+YHSH G Q DGL G M+I
Sbjct: 73 TNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN-- 130
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPHA LYD D + +I + DW H S PDA LING+ + P
Sbjct: 131 DPHAALYDEDDENTIITLADWYHIPAPSIQGAAQ-------PDATLINGKGRYV--GGPA 181
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ V++ K+Y MR+I SC F+I+ H+L +I DG EP VD + +F G
Sbjct: 182 AELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTG 240
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLC---------DSITAEAVLQYEG 360
R ++ NQ + YW++A+ + A+L+Y G
Sbjct: 241 QRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAG 286
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* Length = 503 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 3e-14
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 370 PKSDSF---PRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 426
+ D+ +G P + V++ K+Y MR+I SC F+I+ H+L +I
Sbjct: 163 AQPDATLINGKG-RYVGGPAAELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTII 220
Query: 427 ASDGTAVEPLVVDSVTLFP 445
DG EP VD + +F
Sbjct: 221 EVDGELTEPHTVDRLQIFT 239
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 283 bits (725), Expect = 2e-90
Identities = 78/288 (27%), Positives = 127/288 (44%), Gaps = 35/288 (12%)
Query: 89 GCVTADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW 147
DG + R +++ N Q P P I V KGD + + + N M + ++H+HG++Q T
Sbjct: 12 DYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTAS 71
Query: 148 MDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPH 206
MDGVP +TQCPI +T Y F GT++YHSH Q DG++G II+
Sbjct: 72 MDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDD------ 125
Query: 207 AELYDFDLYSHVIIVTDWMHSMTDSKFPG--NTYNDTRI--KPDAILINGQNQNPKDNSP 262
+ YD+D + +++W H + + YN T P +++N
Sbjct: 126 SFPYDYDE-ELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMNLT----- 179
Query: 263 RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322
++VQ D YL+RI+ F IE H++ V+ DG E V D + +
Sbjct: 180 ------WEVQPDTTYLLRIVNVGGFV-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITV 232
Query: 323 GDRVDVIIHTNQSNNLYWMQAKTLCDS----------ITAEAVLQYEG 360
R V++HT + + + D+ + A + + Y
Sbjct: 233 AQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNK 280
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} Length = 534 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 1e-13
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 392 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445
++VQ D YL+RI+ F IE H++ V+ DG E V D + +
Sbjct: 180 WEVQPDTTYLLRIVNVGGFV-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITV 232
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 1e-83
Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 23/253 (9%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
+ + N Q+P P I V +GD + V+V N T+HWHG+ Q+ T DGVP
Sbjct: 17 VGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVP 75
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK---MDGLEGSMIIRTPKTADPHAEL 209
TQ I TF YKF A P+GT +YH HV + + M G+ G +I+ PK P +
Sbjct: 76 HATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVE-PKNPLPIEKT 134
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
D ++++++DW+ S + G D D IN ++ + P
Sbjct: 135 VTKD---YILMLSDWVSSWANKPGEGGIPGDV---FDYYTINAKSFP--ETQP------I 180
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDV 328
+V++ +R+IG H Q+ DG ++ P+ D+V + PG+R DV
Sbjct: 181 RVKKGDVIRLRLIGAGDHVHA--IHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDV 238
Query: 329 IIHTNQSNNLYWM 341
I++ + + +
Sbjct: 239 ILNMDNPGL-WMI 250
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} Length = 318 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 392 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445
+V++ +R+IG H Q+ DG ++ P+ D+V + P
Sbjct: 180 IRVKKGDVIRLRLIGAGDHVHA--IHTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 258 bits (660), Expect = 4e-83
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 28/294 (9%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
A G + + N Q+PGP I V +GD +IV+V N+ T+HWHGV+QK T DGVP
Sbjct: 18 APGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNT-SLPHTIHWHGVHQKGTWRSDGVP 76
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK---MDGLEGSMIIRTPKTADPHAEL 209
VTQ PI + ++ YKF A GT +YH HV + + + G+ G +I+ PK P +
Sbjct: 77 GVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVD-PKQPLPIEKR 135
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
D +++++ W ++ D G T + D +N ++
Sbjct: 136 VTKD---VIMMMSTWESAVADKYGEGGTPMNV---ADYFSVNAKSFPLTQP--------L 181
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDV 328
+V++ +R G H + V DG ++ P D+V + PG+R DV
Sbjct: 182 RVKKGDVVKIRFFGAGGGIHA--MHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDV 239
Query: 329 IIHTNQSNNLYWMQAKT------LCDSITAEAVLQYEGEKLTYVSKRPKSDSFP 376
II + + V++Y+G + D P
Sbjct: 240 IIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVPVDDWYVWKDKDYDP 293
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} Length = 339 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 7e-08
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 392 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445
+V++ +R G H + V DG ++ P D+V + P
Sbjct: 181 LRVKKGDVVKIRFFGAGGGIHA--MHSHGHDMLVTHKDGLPLDSPYYADTVLVSP 233
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A Length = 439 | Back alignment and structure |
|---|
Score = 196 bits (499), Expect = 4e-58
Identities = 75/402 (18%), Positives = 139/402 (34%), Gaps = 74/402 (18%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ G +L+ PGP+++V DT+ + ++N + LHWHG+ ++P +D
Sbjct: 28 LAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRL-PEPTNLHWHGLP--ISPKVDD 84
Query: 151 VPMVTQCPIPSSTTFRYKFPAM--PSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTAD 204
IP ++ Y+F +GTF+YH H V Q GL G++++ + D
Sbjct: 85 P----FLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESS--LD 138
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
EL + + + ++++ D + D +L+NG P
Sbjct: 139 AIPELREAEEH--LLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGA-LRP------- 188
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPG 323
Q+ +R++ S A ++ H L +IA+DG + EPL V + L PG
Sbjct: 189 ---TLVAQK-ATLRLRLLNASN-ARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPG 243
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKDN 383
+R +V++ + + +QA + + RP++ +
Sbjct: 244 ERAEVLVRLRKEGR-FLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPK 302
Query: 384 SPRVPMHF---------------------------------------FKVQRDKRYLMRI 404
+P K Q + +
Sbjct: 303 PLPLPKALSPFPTLPAPVVTRRLVLTEDMMAARFFINGQVFDHRRVDLKGQAQTVEVWEV 362
Query: 405 IGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445
+ P F + H QV++ G D V L
Sbjct: 363 ENQGDMDHP--FHLHVHPFQVLSVGGRPFPYRAWKDVVNLKA 402
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} Length = 448 | Back alignment and structure |
|---|
Score = 165 bits (418), Expect = 3e-46
Identities = 56/311 (18%), Positives = 108/311 (34%), Gaps = 35/311 (11%)
Query: 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSST 163
+ P+I + +G + + +KN + +HWHG V D P I
Sbjct: 32 AEGVLNPTIILRRGQRVDMTLKNKL-TEPTIVHWHGFD--VNWHNDAHP---SFAITPGE 85
Query: 164 TFRYKFPAM-PSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHV 218
++ Y F + +GT+ YH H Q G G +I+ Y +
Sbjct: 86 SYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDS--GSDLGFKYGVND--LP 141
Query: 219 IIVTDWMHSMTDSKFPGNTYNDTR-IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRY 277
++++D + +A+L+NG ++ FK+ Y
Sbjct: 142 LVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGV-KDA----------VFKLSG-GSY 189
Query: 278 LMRIIGGSCLACPLIFTIEKH-----QLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIH 331
+R++ GS A + +I K +++IA D + P+ V ++ L P +R +V++
Sbjct: 190 RLRLVNGSN-ARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248
Query: 332 TNQSNNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKDNSPRVPMHF 391
+ L + + E Y + P + P
Sbjct: 249 LGEGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEP 308
Query: 392 FKVQRDKRYLM 402
K R +R+ +
Sbjct: 309 PKPTRTRRFAL 319
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} Length = 288 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 7e-46
Identities = 51/245 (20%), Positives = 87/245 (35%), Gaps = 34/245 (13%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
A G S N ++PGP++ +GD + + N T+H+HGV++ MDG P
Sbjct: 49 APGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAG-AHPHTIHFHGVHR---ATMDGTP 104
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAEL 209
+ I +F Y+F A P GT YH H + GL G I+ PK P
Sbjct: 105 GIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVE-PKEGRPP--- 160
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
D + V+++ + D + +NG + D
Sbjct: 161 ADDE---MVMVMNGY-------------NTDGGDDNEFYSVNGLPFHFMDFP-------V 197
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVI 329
KV++ + + +I F I + + D+++ G R +
Sbjct: 198 KVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILE 257
Query: 330 IHTNQ 334
+
Sbjct: 258 LRFPY 262
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* Length = 534 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-43
Identities = 47/256 (18%), Positives = 90/256 (35%), Gaps = 36/256 (14%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM 153
D ++ + PGP+ QV +G +V N+ + ++H HG + DG
Sbjct: 53 DLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNA-EAPNSVHLHGSF--SRAAFDGWA- 108
Query: 154 VTQCPIPSSTTFRYKFP-AMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTADPHAE 208
+ + Y +P + T +YH H G G ++ P A+
Sbjct: 109 --EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDP--AEDALN 164
Query: 209 LY-DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMH 267
L + + +I+T ++ + N ++ D I +NGQ P
Sbjct: 165 LPSGYGEFDIPMILTSKQYTANGNLVTTNGELNSFW-GDVIHVNGQ-----------PWP 212
Query: 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQ-------LQVIASDGTAVE-PLVVDSVT 319
F V+ ++Y R + + + +VIASD +E P +
Sbjct: 213 FKNVEP-RKYRFRFLDAAV-SRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLY 270
Query: 320 LFPGDRVDVIIHTNQS 335
+ +R +V+ +
Sbjct: 271 ISMAERYEVVFDFSDY 286
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} Length = 481 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-41
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
G + + N +P P I+V +GD + + VKN + T+HWHGV V P DG P
Sbjct: 65 IKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKL-KEATTIHWHGVP--VPPDQDGSP 121
Query: 153 MVTQCPIPSSTTFRYKF--PAMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTADPH 206
PI + Y+F P +GT++YH H Q GL G+ +I+ D
Sbjct: 122 ---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAK--KDAL 176
Query: 207 AELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTR--IKPDAILINGQNQNPKDNSPRV 264
+ L + ++++D +++ P N ND + + +LINGQ PK
Sbjct: 177 SHLKEK-----DLMISDLRL-DENAQIPNNNLNDWLNGREGEFVLINGQ-FKPK------ 223
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFPG 323
K+ +RI + A L I+ + ++ +DG +E + + + L P
Sbjct: 224 ----IKLAT--NERIRIYNAT-AARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPA 276
Query: 324 DRVDVII 330
RV+V+I
Sbjct: 277 SRVEVLI 283
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... Length = 488 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 3e-38
Identities = 59/252 (23%), Positives = 93/252 (36%), Gaps = 27/252 (10%)
Query: 87 RKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP 146
G T G N L GP++++ +G + VD+ N + E TLHWHG+ V
Sbjct: 25 GAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQL-TEETTLHWHGLE--VPG 81
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSH----VGLQKMDGLEGSMIIRTPK 201
+DG P Q IP P+ T ++H H G Q GL G ++I
Sbjct: 82 EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE-DD 137
Query: 202 TADPHAELYDFDLYSHVIIVTDW-MHSMTDSKFPGNTYNDTRIKP-DAILINGQNQNPKD 259
+ + +IV D + + + D +L NG
Sbjct: 138 EILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA------ 191
Query: 260 NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSV 318
R +R++ G T + L VIASDG + EP+ V +
Sbjct: 192 -----IYPQHAAPRG-WLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSEL 245
Query: 319 TLFPGDRVDVII 330
+ G+R +V++
Sbjct: 246 PVLMGERFEVLV 257
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A Length = 451 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 4e-36
Identities = 57/334 (17%), Positives = 121/334 (36%), Gaps = 38/334 (11%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
G ++ IN + GP+I+V KGD + + N + V++ G+ V + G P
Sbjct: 33 TPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNR-LTENVSMTVAGLQ--VPGPLMGGP 89
Query: 153 MVTQCPIPSSTTFRYKFPAM-PSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTADPHA 207
+ + + P + T +YH++ Q +GL G ++ D +
Sbjct: 90 ---ARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVE-----DEVS 141
Query: 208 ELYDFD----LYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
+ + +I+ D + + + D +L+NG Q+P
Sbjct: 142 KSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFV-GDTLLVNGV-QSP------ 193
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 322
+ +V R +R++ S + + L VI+ D + P+ V ++L P
Sbjct: 194 ----YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248
Query: 323 GDRVDVIIHTNQSNNLYWMQAKTLCDSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKD 382
G+R ++++ + + + T ++ + ++ E + + P G
Sbjct: 249 GERREILVDMSNGDEVSI----TCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL 304
Query: 383 NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 416
+ +PM + +R S P I
Sbjct: 305 VTDSLPMRLLPTEIMAGSPIRSRDISLGDDPGIN 338
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} Length = 276 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 5e-31
Identities = 43/271 (15%), Positives = 75/271 (27%), Gaps = 63/271 (23%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ +PGP I+V +GDT+ ++ N M D +LH HG+ DG
Sbjct: 17 LADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGL--DYEISSDG 73
Query: 151 VPMVTQCPIPSSTTFRYKFPA-------------MPSGTFFYHSHVGLQKM------DGL 191
+ + + T Y + +G + YH HV + +GL
Sbjct: 74 TA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGL 132
Query: 192 EGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILIN 251
G +I+R P A + +++ P + D + I
Sbjct: 133 YGPVIVRRKGDVLPDAT-----------HTIVFNDMTINNRKPHTGPDFEATVGDRVEIV 181
Query: 252 GQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
++ + H + R
Sbjct: 182 MITHGEYYHTFHMHGHRWADNRTGILTGPD----------------------------DP 213
Query: 312 PLVVDSVTLFPGDRVDVIIHTNQSNNL-YWM 341
V+D+ P D I + WM
Sbjct: 214 SRVIDNKITGPADSFGFQIIAGEGVGAGAWM 244
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A Length = 513 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 62/346 (17%), Positives = 120/346 (34%), Gaps = 62/346 (17%)
Query: 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHM---------------------IDRE 132
D + N PGP+I+V + + + V N++ + +
Sbjct: 42 DLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVK 101
Query: 133 VTLHWHGVYQKVTPWMDGVP--MVTQCPIPSSTTFR---YKFPAM-PSGTFFYHSH---- 182
+H HG DG P ++ + F+ Y +P +YH H
Sbjct: 102 TVVHLHGGV--TPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMAL 159
Query: 183 VGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDW-------MHSMTDSKFPG 235
L GL G+ II PK ++D +++TD + + + P
Sbjct: 160 TRLNVYAGLVGAYIIHDPKEKRLKLPSDEYD---VPLLITDRTINEDGSLFYPSAPENPS 216
Query: 236 NTYNDTRIKP----DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291
+ + I P + IL+NG+ P + +V+ ++Y R+I S
Sbjct: 217 PSLPNPSIVPAFCGETILVNGK-VWP----------YLEVEP-RKYRFRVINASNTRTYN 264
Query: 292 IFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLCDSI 350
+ I SDG + + ++S +L P +R D+II + A +
Sbjct: 265 LSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSA--GC 322
Query: 351 TAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKDNSPRVPMHFFKVQR 396
+ + + + + +P + KPK + + ++Q
Sbjct: 323 GGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQN 368
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} Length = 343 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 9e-30
Identities = 44/271 (16%), Positives = 75/271 (27%), Gaps = 63/271 (23%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ +PGP I+V +GDT+ ++ N M D +LH HG+ DG
Sbjct: 58 LADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGL--DYEISSDG 114
Query: 151 VPMVTQCPIPSSTTFRYKFPA-------------MPSGTFFYHSHVGLQKMD------GL 191
+ + + T Y + +G + YH HV + GL
Sbjct: 115 TA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGL 173
Query: 192 EGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILIN 251
G +I+R L D + +++ P + D + I
Sbjct: 174 YGPVIVR-----RKGDVLPDAT------HTIVFNDMTINNRKPHTGPDFEATVGDRVEIV 222
Query: 252 GQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
++ + H + R G
Sbjct: 223 MITHGEYYHTFHMHGHRWADNRTGIL----------------------------TGPDDP 254
Query: 312 PLVVDSVTLFPGDRVDVIIHTNQSNNL-YWM 341
V+D+ P D I + WM
Sbjct: 255 SRVIDNKITGPADSFGFQIIAGEGVGAGAWM 285
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 Length = 306 | Back alignment and structure |
|---|
Score = 114 bits (285), Expect = 8e-29
Identities = 36/244 (14%), Positives = 68/244 (27%), Gaps = 50/244 (20%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--------VTQCP 158
L GP++ GD + V KN + +++H G+ + + +G
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIK--YSKFSEGASYSDHTLPMEKMDDA 113
Query: 159 IPSSTTFRYKFPA----------MPSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPH 206
+ + Y++ P T Y+S+V L GL G ++I T
Sbjct: 114 VAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTED 173
Query: 207 AELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPM 266
F+ HV++ + S + ++ Y M
Sbjct: 174 GTQKMFE-KQHVLMFAVFDESKSWNQTSSLMYTVNGYVNG------------------TM 214
Query: 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRV 326
V +IG S L+ + ++TL
Sbjct: 215 PDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE--------QNHHKISAITLVSATST 266
Query: 327 DVII 330
+
Sbjct: 267 TANM 270
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} Length = 442 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 44/257 (17%), Positives = 81/257 (31%), Gaps = 44/257 (17%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHM-IDREVTLHWHGVYQKVTPWMDGV 151
ADG E S +PG I+V +GD I ++ NH + H V
Sbjct: 43 ADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAV-------TGPG 95
Query: 152 PMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAE 208
T + F A+ G + YH VG+ +G+ G +++ PK
Sbjct: 96 GGAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVE-PKEGLAP-- 152
Query: 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDT----RIKPDAILINGQNQNPKDNSP-- 262
D + Y ++ D+ ++ + G D D ++ NG + D +
Sbjct: 153 -VDREYY---LVQGDF-YTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTTDENSLT 207
Query: 263 -----RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDS 317
V ++ + +IG + +G +++ V +
Sbjct: 208 AKVGETVRLYIGNGGPNLVSSFHVIG--------------EIFDTVYVEGGSLKNHNVQT 253
Query: 318 VTLFPGDRVDVIIHTNQ 334
+ G V
Sbjct: 254 TLIPAGGAAIVEFKVEV 270
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 4e-28
Identities = 44/263 (16%), Positives = 78/263 (29%), Gaps = 30/263 (11%)
Query: 92 TADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQ----KVTP 146
T + F R + + GP + GDT+++ KN R ++ HG+
Sbjct: 433 TDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQA-SRPYNIYPHGITDVRPLYSRR 491
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPA----------MPSGTFFYHSHV--GLQKMDGLEGS 194
GV + PI F+YK+ T +Y S V GL G
Sbjct: 492 LPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGP 551
Query: 195 MIIRTPKTADPHAELYDFDLYSHVIIVTDW---MHSMTDSKFPGNTYNDTRIKPDAILIN 251
++I ++ D D +VI+ + + N ++ +
Sbjct: 552 LLICYKESVDQRGNQIMSD-KRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQ 610
Query: 252 GQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
N N V + I+ L + + +
Sbjct: 611 ASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFK--------HK 662
Query: 312 PLVVDSVTLFPGDRVDVIIHTNQ 334
+ D++TLFP V +
Sbjct: 663 MVYEDTLTLFPFSGETVFMSMEN 685
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 3e-24
Identities = 40/249 (16%), Positives = 67/249 (26%), Gaps = 38/249 (15%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV----TPWMDGVPMVTQC--PIP 160
L GP+IQ DT+++ +KN V+LH GV + D + +
Sbjct: 72 LLGPTIQAEVYDTVVITLKNMA-SHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVF 130
Query: 161 SSTTFRYKFPA----------MPSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAE 208
+ Y + T+ Y SHV L GL G++++ +
Sbjct: 131 PGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKT 190
Query: 209 LYDFD---LYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVP 265
L++ W +S R P +NG
Sbjct: 191 QTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAASARAWPKMHTVNGYVNR--------S 242
Query: 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDR 325
+ K +IG +E H V S+ + P
Sbjct: 243 LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHR--------QASLEISPITF 294
Query: 326 VDVIIHTNQ 334
+
Sbjct: 295 LTAQTLLMD 303
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* Length = 742 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 4e-04
Identities = 18/129 (13%), Positives = 36/129 (27%), Gaps = 6/129 (4%)
Query: 110 PSIQVCKGDTIIVDVKNHMIDREV-TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 168
P + C ++ V EV ++ G V I T +
Sbjct: 244 PGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNHRQASL-----EISPITFLTAQ 298
Query: 169 FPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSM 228
M G F H+ + DG+E + + + + + + +TD +
Sbjct: 299 TLLMDLGQFLLFCHISSHQHDGMEAYVKVDSCPEEPQLRMKNNEEAEDYDDDLTDSEMDV 358
Query: 229 TDSKFPGNT 237
+
Sbjct: 359 VRFDDDNSP 367
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 112 bits (280), Expect = 1e-26
Identities = 35/250 (14%), Positives = 62/250 (24%), Gaps = 28/250 (11%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
ER + + GP + GD + + KN R ++H HGV T
Sbjct: 797 ERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ---------TESSTV 846
Query: 157 CPIPSSTTFRYKFPA----------MPSGTFFYHSHV--GLQKMDGLEGSMIIRTPKTAD 204
P T Y + + Y+S V GL G +I+
Sbjct: 847 TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLK 906
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
+ ++ + D + + ++ D N+ N
Sbjct: 907 VFNPRRKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMF 966
Query: 265 PMHF-FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ ++G H Q D +FPG
Sbjct: 967 GNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKHRG-----VYSSDVFDIFPG 1021
Query: 324 DRVDVIIHTN 333
+ +
Sbjct: 1022 TYQTLEMFPR 1031
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-25
Identities = 41/261 (15%), Positives = 68/261 (26%), Gaps = 53/261 (20%)
Query: 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--------VTQC 157
GP I+ GD + V +KN R T H HG+ +G
Sbjct: 91 GFLGPIIKAETGDKVYVHLKNLA-SRPYTFHSHGIT--YYKEHEGAIYPDNTTDFQRADD 147
Query: 158 PIPSSTTFRYKFPAMPSG----------TFFYHSHVGL--QKMDGLEGSMIIRTPKTADP 205
+ + Y A T YHSH+ GL G +II + D
Sbjct: 148 KVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDK 207
Query: 206 HAE----------LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQ 255
E D + + ++ + D + +NG
Sbjct: 208 EKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSNRMYSVNGYTF 267
Query: 256 NPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PL 313
+ + R + G + + G A+
Sbjct: 268 GSLSG--------LSMCAEDRVKWYLFGMG----------NEVDVHAAFFHGQALTNKNY 309
Query: 314 VVDSVTLFPGDRVDVIIHTNQ 334
+D++ LFP D +
Sbjct: 310 RIDTINLFPATLFDAYMVAQN 330
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 91.2 bits (225), Expect = 1e-19
Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 34/256 (13%)
Query: 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGV----------YQKVTPWMDGVPM 153
+ + GP I GDTI V N +++ GV Y
Sbjct: 445 HLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNYNPQSRSVP 503
Query: 154 VTQCPIPSSTTFRYKFPAMPSG----------TFFYHSHVGLQK--MDGLEGSMIIRTPK 201
+ + + TF Y++ Y+S V K GL G M I
Sbjct: 504 PSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKG 563
Query: 202 TADPHAELYDFD-LYSHVIIVTDWMHSMTDSKF--PGNTYNDTRIKPDAILINGQNQNPK 258
+ + D D + V D S+ T D K D +
Sbjct: 564 SLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPDQVDKEDEDFQESNKMHSM 623
Query: 259 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 318
+ + + + + A + D+
Sbjct: 624 NGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGER--------RDTA 675
Query: 319 TLFPGDRVDVIIHTNQ 334
LFP + + + +
Sbjct: 676 NLFPQTSLTLHMWPDT 691
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* Length = 1065 | Back alignment and structure |
|---|
Score = 46.1 bits (108), Expect = 2e-05
Identities = 24/244 (9%), Positives = 65/244 (26%), Gaps = 6/244 (2%)
Query: 24 PNDVASGRYDNMSTAEAEKNNLCARPCDNAKPLVCYYSFTLENYATVGPACADCLKGNQK 83
D+ +G M + + R D K + + EN + +
Sbjct: 546 TKDIFTGLIGPMKICKKGSLHANGRQKDVDKEFYLFPTVFDENESLLLEDNIRMFTTAPD 605
Query: 84 ACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNH-MIDREVTLHWHGVYQ 142
++ + + ++ P + +CKGD+++ + + +++ G
Sbjct: 606 QVDKEDEDFQESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGN-- 663
Query: 143 KVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKT 202
T G + T+ GTF G++ + +
Sbjct: 664 --TYLWRGER-RDTANLFPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTVNQCRR 720
Query: 203 ADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSP 262
+ Y + ++ V ++ ++ ++
Sbjct: 721 QSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQNVSNAFLDKGEFYIGSKYK 780
Query: 263 RVPM 266
+V
Sbjct: 781 KVVY 784
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A Length = 327 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 2e-24
Identities = 44/256 (17%), Positives = 80/256 (31%), Gaps = 42/256 (16%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
DG E + + +PG I+V +GDT+ V+ N+ H +
Sbjct: 53 DDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNN--PSSTVPHNVDFHAA----TGQGG 106
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAEL 209
T + F A+ G + YH VG+ +G+ G +++ PK P
Sbjct: 107 GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVE-PKEGLPK--- 162
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDT----RIKPDAILINGQNQNPKDNSP--- 262
D + Y I+ D+ + G D +P+ ++ NG ++
Sbjct: 163 VDKEFY---IVQGDFY-TKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALTGDNALKA 218
Query: 263 ----RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 318
V M+ + +IG + +G + V S
Sbjct: 219 KAGETVRMYVGNGGPNLVSSFHVIG--------------EIFDKVYVEGGKLINENVQST 264
Query: 319 TLFPGDRVDVIIHTNQ 334
+ G V +
Sbjct: 265 IVPAGGSAIVEFKVDI 280
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 7e-24
Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 36/254 (14%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHM-IDREVTLHWHGVYQKVTPWMDGV 151
D + N ++PGP ++V GDT+ + +KNH ++ +HG G
Sbjct: 178 DDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGA 232
Query: 152 PMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAE 208
TQ F A+ G + YH V +G+ G +++ P+ P +
Sbjct: 233 AAFTQ--TDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVE-PEGGLPQVD 289
Query: 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDT----RIKPDAILINGQ-NQNPKDNSPR 263
+ ++ ++++ G D KP+ L NG + +
Sbjct: 290 REFY-------VMQGEIYTVKSFGTSGEQEMDYEKLINEKPEYFLFNGSVGSLTRSH--- 339
Query: 264 VPMHFFKVQRDKRYLMRII-GGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF- 321
P+ + + GG F + + S G+ V P ++ T+
Sbjct: 340 -PL---YASVGETVRIFFGVGGPNFTSS--FHVIGEIFDHVYSLGSVVSPPLIGVQTVSV 393
Query: 322 -PGDRVDVIIHTNQ 334
PG V ++
Sbjct: 394 PPGGATIVDFKIDR 407
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} Length = 447 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 8e-10
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 12/105 (11%)
Query: 108 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRY 167
P++ V +G+T+ V++ N E H V D + + + +
Sbjct: 53 INPTLVVHEGETVQVNLVNG----EGAQHDVVV--------DQYAARSAIVNGKNASSTF 100
Query: 168 KFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDF 212
F A G F Y+ + + G+EG++ + A+ + D
Sbjct: 101 SFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADI 145
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... Length = 340 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 4e-21
Identities = 37/265 (13%), Positives = 74/265 (27%), Gaps = 40/265 (15%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW--- 147
+ +G E ++ N +PGP + V + D + + + N + H + +
Sbjct: 52 IDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP----DTNTLLHNI-----DFHAA 102
Query: 148 MDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPKTA 203
+ + +F A G F YH V G+ G++++
Sbjct: 103 TGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGL 162
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDS------KFPGNTYNDTRIK-----PDAILING 252
+ + D+ ++ + PG Y D P I+ NG
Sbjct: 163 KDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNG 222
Query: 253 Q-NQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
D++ +R L+ + + + + G
Sbjct: 223 AVGALTGDHA-------LTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWATGKFRN 272
Query: 312 PLVVDSVTLF--PGDRVDVIIHTNQ 334
P +D T G Q
Sbjct: 273 PPDLDQETWLIPGGTAGAAFYTFRQ 297
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... Length = 336 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 23/178 (12%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ G ++ N +PGP++ V +GD + + + N H V
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNP----ATNAMPHNV--DFHGATGA 99
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIRTPK--TAD 204
+ + +F A SGTF YH V + G+ G++++ P+ D
Sbjct: 100 LGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVL-PRDGLKD 158
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKF-----PGNTYNDT-----RIKPDAILING 252
P + +D + ++ D K+ +Y DT + P I+ NG
Sbjct: 159 PQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNG 216
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 Length = 647 | Back alignment and structure |
|---|
Score = 78.7 bits (193), Expect = 9e-16
Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 42/258 (16%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
+ + + GP I+ D I V KN R +LH HG+ +G
Sbjct: 56 PQGEYEEHLGILGPVIRAEVDDVIQVRFKNLA-SRPYSLHAHGL--SYEKSSEGKTYEDD 112
Query: 157 CP--------IPSSTTFRYKFPAMP----------SGTFFYHSHVGL--QKMDGLEGSMI 196
P I + T+ Y + A + Y+S V GL G ++
Sbjct: 113 SPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLL 172
Query: 197 IRTPKTADPHAE----LYDFDLYSHVIIVTD-WMHSMTDSKFPGNTYNDTRIKPDAILIN 251
I T D + +F L V W + ++ ++ + + IN
Sbjct: 173 ICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAIN 232
Query: 252 GQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 311
G N P + M+ + + + +L+ + G I + H Q + +GT
Sbjct: 233 GMI----YNLPGLRMY--EQEWVRLHLLNLGGSR-----DIHVVHFHG-QTLLENGTQQH 280
Query: 312 PLVVDSVTLFPGDRVDVI 329
L V L PG +
Sbjct: 281 QLGV--WPLLPGSFKTLE 296
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A Length = 333 | Back alignment and structure |
|---|
Score = 76.4 bits (188), Expect = 2e-15
Identities = 28/177 (15%), Positives = 54/177 (30%), Gaps = 24/177 (13%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV-TLHWHGVYQKVTPWMDGV 151
+ ++ + +PGP + V +GD + + + N + + +H +
Sbjct: 47 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAA-------TGAL 99
Query: 152 PMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG-----LQKMDGLEGSMIIRTPKTADPH 206
I +F A +G F YH G + G+ G +++ H
Sbjct: 100 GGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDH 159
Query: 207 AELYDFDLYSHVIIVTDWMHSMTDSKF------PGNTYNDT-----RIKPDAILING 252
+ I +D + P Y D + P I+ NG
Sbjct: 160 EGKPVRYDTVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNG 216
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* Length = 770 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 1e-09
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 15/117 (12%)
Query: 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYK 168
GP I+ D I+V +N R + + + + P + + T Y
Sbjct: 198 GPYIRAEVEDNIMVTFRN-QASRPYSFYSSLISYEEDQRQGAEPRKN--FVKPNETKTYF 254
Query: 169 FPAMP----------SGTFFYHSHVGLQK--MDGLEGSMIIRTPKTADPHAELYDFD 213
+ + Y S V L+K GL G +++ T +P
Sbjct: 255 WKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTV 311
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A Length = 154 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 1e-05
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 13/101 (12%)
Query: 107 LPGPSIQVCKGDTIIVDVKN------HMIDREVTLHWHGVYQKVTPWMDGVPMVTQC--- 157
P++++ G T+ V N H + G V P +D + T
Sbjct: 58 KKNPTLEIPAGATVDVTFINTNKGFGHSF----DITKKGPPYAVMPVIDPIVAGTGFSPV 113
Query: 158 PIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
P + +GT++Y + G+ G ++++
Sbjct: 114 PKDGKFGYTDFTWHPTAGTYYYVCQIPGMAATGMFGKIVVK 154
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 445 | |||
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 100.0 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 100.0 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 100.0 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 100.0 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 100.0 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 100.0 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 100.0 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 100.0 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 100.0 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 100.0 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 100.0 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 100.0 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 100.0 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 100.0 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 100.0 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 100.0 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 100.0 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 100.0 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 100.0 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 100.0 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 100.0 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 100.0 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 100.0 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 100.0 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 100.0 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 100.0 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 100.0 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 100.0 | |
| 2j5w_A | 1065 | Ceruloplasmin, ferroxidase; oxidoreductase, plasma | 100.0 | |
| 2r7e_A | 742 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 100.0 | |
| 2zwn_A | 339 | Two-domain type laccase; muticopper oxidase, oxido | 99.9 | |
| 3pxl_A | 499 | Laccase; 4-copper protein, metal-binding, oxidored | 99.88 | |
| 3t6v_A | 495 | Laccase; beta barrel, oxidoreductase; HET: CBS; 2. | 99.88 | |
| 3sqr_A | 580 | Laccase; multicopper oxidase, glycosylation, oxido | 99.88 | |
| 3g5w_A | 318 | Multicopper oxidase type 1; two domain, laccase, n | 99.87 | |
| 1zpu_A | 534 | Iron transport multicopper oxidase FET3; ferroxida | 99.85 | |
| 1v10_A | 521 | Laccase; multicopper blue oxidase, oxidase; 1.7A { | 99.85 | |
| 1aoz_A | 552 | Ascorbate oxidase; oxidoreductase(oxygen acceptor) | 99.85 | |
| 1hfu_A | 503 | Laccase 1; oxidoreductase, blue multi-copper oxida | 99.85 | |
| 2q9o_A | 559 | Laccase-1; multicopper oxidase, 2-OXOH oxidoreduct | 99.84 | |
| 3gdc_A | 288 | Multicopper oxidase; beta sandwich, plasmid, oxido | 99.83 | |
| 2uxt_A | 451 | Protein SUFI, SUFI; oxidoreductase, periplasmic, c | 99.82 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 99.81 | |
| 3cg8_A | 343 | Laccase; oxidoreductase, multicopper blue protein; | 99.79 | |
| 3t9w_A | 299 | Small laccase, multi-copper oxidase; two-domain co | 99.78 | |
| 3tas_A | 313 | Small laccase, multi-copper oxidase; two-domain la | 99.78 | |
| 3zx1_A | 481 | Oxidoreductase, putative; laccase, metallo-oxidase | 99.77 | |
| 2xu9_A | 439 | Laccase; oxidoreductase, multicopper oxidases; 1.5 | 99.76 | |
| 3od3_A | 488 | Blue copper oxidase CUEO; multicopper oxidase, Cu( | 99.76 | |
| 3aw5_A | 448 | Multicopper oxidase; beta barrel, oxidoreductase; | 99.75 | |
| 3kw8_A | 276 | Laccase, putative copper oxidase; two-domain lacca | 99.75 | |
| 3abg_A | 534 | Bilirubin oxidase; cleavage on PAIR of basic resid | 99.74 | |
| 2zoo_A | 442 | Probable nitrite reductase; electron transfer, ele | 99.73 | |
| 2wsd_A | 513 | Spore coat protein A; oxidoreductase, multi-copper | 99.72 | |
| 3gyr_A | 612 | PHS, phenoxazinone synthase; metalloprotein, lacca | 99.71 | |
| 1sdd_A | 306 | Coagulation factor V; copper-binding protein, cofa | 99.69 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 99.69 | |
| 2g23_A | 612 | PHS, phenoxazinone synthase; copper, metalloprotei | 99.69 | |
| 2bw4_A | 340 | Copper-containing nitrite reductase; oxidoreductas | 99.67 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 99.65 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 99.63 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 99.62 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 99.56 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.49 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 99.4 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.33 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 99.18 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 99.0 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 98.88 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.78 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.73 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 98.66 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 98.65 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.64 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.61 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.58 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.55 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.49 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.48 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.48 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 98.45 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.3 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 98.28 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 98.21 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.16 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 98.15 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 98.13 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.07 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.03 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 97.93 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 97.88 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 97.88 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 97.8 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.77 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 97.72 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 97.71 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.65 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 97.63 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 97.62 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 97.31 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 96.86 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 96.85 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 96.78 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 96.72 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 96.7 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 96.7 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 96.57 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 96.57 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 96.44 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 96.35 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 96.22 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 96.06 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 96.0 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 95.95 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 95.88 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 95.87 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 95.63 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 95.57 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 95.57 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 95.43 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 95.09 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.86 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 94.02 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 93.72 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 93.15 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 93.12 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 93.04 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 92.77 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 91.4 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 91.37 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 90.76 |
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-70 Score=573.10 Aligned_cols=345 Identities=29% Similarity=0.551 Sum_probs=278.0
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCce
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
.+.+||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|||||||++|++++||||+|++|||||+||++|
T Consensus 15 ~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sf 94 (495)
T 3t6v_A 15 DIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSF 94 (495)
T ss_dssp EECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEE
T ss_pred EEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeE
Confidence 47799999999999999999999999999999999999984 37999999999999999999999999999999999
Q ss_pred EEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCC
Q psy16562 166 RYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIK 244 (445)
Q Consensus 166 ~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 244 (445)
+|+|++ .++||||||||.+.|+.+||+|+|||+++. ++...+|++|..|++|+++||+++..... . ......
T Consensus 95 tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-~----~~~p~~ 167 (495)
T 3t6v_A 95 SYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN--DPDANLYDVDDDTTIITLADWYHVLAKEM-G----AGGAIT 167 (495)
T ss_dssp EEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSGGGEEEEEEECSSCGGGS-C----SSSCCC
T ss_pred EEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc--ccccccCCCCCceeEEEEecccCCchhhh-c----cCCCCC
Confidence 999999 589999999999999999999999999874 35555688876688999999999865431 1 112247
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
++++||||++.+.++ ....+.+.|+|++|++|||||||++.. +.+.|+|+||.|+||++||.+++|..++++.|+|||
T Consensus 168 ~d~~liNG~g~~~~~-~~~~~~~~~~v~~G~~~RlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVN-VAAVPLSVITVEVGKRYRMRLVSISCD-PNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CSEEEETTBCCBSSS-CCCCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CcEEEECCcCcCCCC-cccCCceEEEEcCCCEEEEEEEecCCC-eeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCce
Confidence 899999999764321 112456799999999999999999987 478999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCC-CCCCCCC--C---C--CC--------CC------
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLT-YVSKRPK--S---D--SF--------PR------ 377 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~-~~~~~P~--~---~--~~--------~~------ 377 (445)
||||+|++++++|+|||++... |.. ....|+|+|.+.... +....+. . . .+ +.
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTKCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSSBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCccccccccccccccccCCCccCCCC
Confidence 9999999999889999999865 322 234699999875431 1100000 0 0 00 00
Q ss_pred ------------CCCC-CCCCCC-----c------------------cceeEeeCCcEEEEEEE-cCCCCccceEEEEeC
Q psy16562 378 ------------GKPK-DNSPRV-----P------------------MHFFKVQRDKRYLMRII-GGSCLACPLIFTIEK 420 (445)
Q Consensus 378 ------------~~~~-~~~~~~-----~------------------~~~~~v~~G~~~~~rli-N~s~~~Hp~~~hihg 420 (445)
+..+ .|+..+ + ...+.++.|++++|.|. |.+...||| ||||
T Consensus 326 ~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~--HLHG 403 (495)
T 3t6v_A 326 ADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPF--HLHG 403 (495)
T ss_dssp SSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEE--EETT
T ss_pred CcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcce--eecC
Confidence 0000 011111 0 11478899999999998 677788998 9999
Q ss_pred eeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 421 HQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 421 h~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
|+|+|++.+|... .|.++||+.|.|
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~ 432 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGG 432 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCS
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCC
Confidence 9999999988754 589999999864
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-70 Score=570.45 Aligned_cols=353 Identities=30% Similarity=0.572 Sum_probs=284.6
Q ss_pred EEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCc
Q psy16562 58 CYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REV 133 (445)
Q Consensus 58 ~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~t 133 (445)
..|+|+|++. .+.+||++|.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|
T Consensus 4 ~~~~l~v~~~----------------------~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~t 61 (499)
T 3pxl_A 4 PVADLTITDA----------------------AVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKST 61 (499)
T ss_dssp SEEEEEEEEE----------------------EECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCB
T ss_pred ceEEEEEEEE----------------------EEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCce
Confidence 4688999864 47799999999999999999999999999999999999984 479
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCcccc
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDF 212 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~ 212 (445)
||||||++|++++||||+|++|||||+||++|+|+|++ .++||||||||.+.|+.+||+|+|||+++. ++....|++
T Consensus 62 siHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~--~~~~~~~~~ 139 (499)
T 3pxl_A 62 SIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN--DPHASRYDV 139 (499)
T ss_dssp CEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSB
T ss_pred EEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCc--ccccccCCC
Confidence 99999999999999999999999999999999999999 589999999999999999999999999874 345556888
Q ss_pred CCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
|..|++|+++||+++..... ......++++||||++.+.++ ...+.+.|+|++|++|||||||++.. +.+.
T Consensus 140 d~~~~~l~l~Dw~~~~~~~~------~~~p~~~d~~liNG~~~~~~~--~~~~~~~~~v~~G~~~RlRliNa~~~-~~~~ 210 (499)
T 3pxl_A 140 DNDDTVITLADWYHTAAKLG------PRFPGGADATLINGKGRAPSD--SVAELSVIKVTKGKRYRFRLVSLSCN-PNHT 210 (499)
T ss_dssp CSGGGEEEEEEECSSCTTTS------CSSCSSCSEEEETTBCCCTTC--TTCCCCEEEECTTCEEEEEEEECCSS-CCEE
T ss_pred CCceEEEEEEcccCCccccc------cCCCCCCcEEEECCCCcCCCC--CCCCcceEEEcCCCEEEEEEEecCCC-eeEE
Confidence 76688999999999765431 112246899999999765321 22456799999999999999999987 4789
Q ss_pred EEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCCCC-
Q psy16562 293 FTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLTYV- 366 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~~~- 366 (445)
|+|+||.|+||++||.+++|..++.+.|+|||||||+|++++++|+||+++... |.. ....|+|+|.+.....+
T Consensus 211 ~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~ 290 (499)
T 3pxl_A 211 FSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPT 290 (499)
T ss_dssp EEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCC
T ss_pred EEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCC
Confidence 999999999999999999999999999999999999999999889999999865 322 23469999987643111
Q ss_pred CCC-CC------CC--CC-----C------------------CCCCC-CCCCCC-----c------------------cc
Q psy16562 367 SKR-PK------SD--SF-----P------------------RGKPK-DNSPRV-----P------------------MH 390 (445)
Q Consensus 367 ~~~-P~------~~--~~-----~------------------~~~~~-~~~~~~-----~------------------~~ 390 (445)
... +. .. .+ + .+..+ .|+..+ + ..
T Consensus 291 ~~~~~~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~ 370 (499)
T 3pxl_A 291 TNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGS 370 (499)
T ss_dssp CCCCCCSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTS
T ss_pred CCCCCCCcccccccccccccccCCCcccCCCCcEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCce
Confidence 000 00 00 00 0 00000 111111 0 12
Q ss_pred eeEeeCCcEEEEEEE---cCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 391 FFKVQRDKRYLMRII---GGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 391 ~~~v~~G~~~~~rli---N~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
.+.++.|++++|.|. |.+...||| |||||+|+|++.+|... .|.++||+.|.|
T Consensus 371 v~~~~~g~~V~ivl~~~~n~~~~~HP~--HLHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~ 430 (499)
T 3pxl_A 371 VYVLPSNASIEISFPATAAAPGAPHPF--HLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGT 430 (499)
T ss_dssp EEEECTTCEEEEEEECCTTSCSCSCEE--EETTCCEEEEECTTCCCCCSSSCCEESEEECCC
T ss_pred eEEecCCCEEEEEEecCcccCCCCccc--eecCCcEEEEeccCCcccccCCCCccceEEcCC
Confidence 478899999999999 667788998 99999999999887654 489999999864
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-70 Score=580.93 Aligned_cols=281 Identities=31% Similarity=0.603 Sum_probs=238.8
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
+++++|+|+|++. .+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 1 ~~~~~y~~~v~~~----------------------~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~ts 58 (552)
T 1aoz_A 1 SQIRHYKWEVEYM----------------------FWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVV 58 (552)
T ss_dssp CCEEEEEEEEEEE----------------------EECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred CeEEEEEEEEEEE----------------------EEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCee
Confidence 5789999999963 467899999999999999999999999999999999999768999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
|||||++|.+++||||+|++|||+|+||++|+|+|++.++||||||||.+.|+++||+|+|||++++.. ..++++|
T Consensus 59 iHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~---~~~~~~d- 134 (552)
T 1aoz_A 59 IHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGK---KEPFHYD- 134 (552)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTC---CCSSCCS-
T ss_pred EEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCCccc---CCCCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999999999987432 2345666
Q ss_pred cceEEEEeeeeccCCCCccCCCCCC--CCCCCCCeEEEccccCCCCCC---------------CCCcccceEEEecCcEE
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTYN--DTRIKPDAILINGQNQNPKDN---------------SPRVPMHFFKVQRDKRY 277 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~~~~lING~~~~~~~~---------------~~~~p~~~i~v~~G~~~ 277 (445)
.|++|+|+||++......+...... .....++.+||||++.+++.. ....+.+.++|++|++|
T Consensus 135 ~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~ 214 (552)
T 1aoz_A 135 GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTY 214 (552)
T ss_dssp EEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEE
T ss_pred ccceEEeecccCCCHHHHHhhhhcccccCCCCCCeEEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEE
Confidence 4899999999987654322111100 111357899999998763210 11123458999999999
Q ss_pred EEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEec-CCCCceEEEEEEec-C--CCceee
Q psy16562 278 LMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHT-NQSNNLYWMQAKTL-C--DSITAE 353 (445)
Q Consensus 278 rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~-~~~~G~y~~~~~~~-~--~~~~~~ 353 (445)
||||||++.. +.+.|+|+||.|+||++||++++|..++++.|+|||||||+|++ ++.+|+||++++.. | ....+.
T Consensus 215 RlRliNa~~~-~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ 293 (552)
T 1aoz_A 215 RIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGL 293 (552)
T ss_dssp EEEEEECCSS-CEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEE
T ss_pred EEEEEccccc-ceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEE
Confidence 9999999987 58999999999999999999999999999999999999999999 56679999999886 4 445678
Q ss_pred EEEEEcCCC
Q psy16562 354 AVLQYEGEK 362 (445)
Q Consensus 354 ail~y~~~~ 362 (445)
|+|+|.+..
T Consensus 294 ail~y~~~~ 302 (552)
T 1aoz_A 294 TLLNYLPNS 302 (552)
T ss_dssp EEEEETTSC
T ss_pred EEEEECCCC
Confidence 999998765
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-70 Score=575.57 Aligned_cols=358 Identities=28% Similarity=0.461 Sum_probs=281.2
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++++|+|+|++. .+.+||+++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 65 ~~~~~~~l~v~~~----------------------~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~ts 122 (580)
T 3sqr_A 65 GVTREYWLSVENS----------------------TITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTS 122 (580)
T ss_dssp CCEEEEEEEEEEE----------------------EECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred ceEEEEEEEEEEE----------------------EecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcce
Confidence 5677777777763 367899999999999999999999999999999999999867999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDL 214 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~ 214 (445)
|||||++|.+++||||+|++|||||+||++|+|+|++.++||||||||.+.|+.+||+|+|||+++.. ..||.|
T Consensus 123 IHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~-----~~yD~d- 196 (580)
T 3sqr_A 123 IHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT-----ADYDED- 196 (580)
T ss_dssp EEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS-----SCCSEE-
T ss_pred EEecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCccc-----CCCCcc-
Confidence 99999999999999999999999999999999999999999999999999999999999999998743 235554
Q ss_pred cceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCC------CCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKD------NSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~------~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
..+|+|+||+++...+.+.. ....+...++++||||++.+.+. +......+.++|++|++|||||||++...
T Consensus 197 -~~~l~l~Dw~~~~~~~~~~~-~~~~~~~~~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~ 274 (580)
T 3sqr_A 197 -VGVIFLQDWAHESVFEIWDT-ARLGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDS 274 (580)
T ss_dssp -EEEEEEEEECSSCHHHHHHH-HTTSCCCCBSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSC
T ss_pred -ceEEEEEEEecCCHHHHHHH-HhccCCCCCceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCc
Confidence 24999999999865442221 11234567899999999876431 12234568999999999999999999874
Q ss_pred eeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC----CceeeEEEEEcCCC
Q psy16562 289 CPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD----SITAEAVLQYEGEK 362 (445)
Q Consensus 289 ~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~----~~~~~ail~y~~~~ 362 (445)
.+.|+|+||.|+||++||.+++|..++++.|+|||||||+|++++.+|+|||++... |. .....|||+|.+..
T Consensus 275 -~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~ 353 (580)
T 3sqr_A 275 -HFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSS 353 (580)
T ss_dssp -CEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTC
T ss_pred -eeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCC
Confidence 899999999999999999999999999999999999999999999889999999876 42 23578999998754
Q ss_pred CCCCCCCC-CCC---------CC-C---CCC------------------CC-CCCCCC------c-------------c-
Q psy16562 363 LTYVSKRP-KSD---------SF-P---RGK------------------PK-DNSPRV------P-------------M- 389 (445)
Q Consensus 363 ~~~~~~~P-~~~---------~~-~---~~~------------------~~-~~~~~~------~-------------~- 389 (445)
...+...+ ... .+ + ... .+ .|+..+ | .
T Consensus 354 ~~~P~~~~~~~~~~~~~~~~~~L~P~~~~~~~~~~~~~~~l~~~~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~ 433 (580)
T 3sqr_A 354 IANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAFTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTE 433 (580)
T ss_dssp CCCCCCCCCCCCCCSCCSCGGGCCBSSCCBCCSEEEEEEEEEEEESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGG
T ss_pred CCCCCCCCCCccchhhcccccccccCCCCCCCCccceEEEEEeccCCceeEEECCEecccCCCCCchhhhhcCCccCCCC
Confidence 32111000 000 00 0 000 00 011111 0 0
Q ss_pred -ceeEe----eCCcEEEEEEEcCC--CCccceEEEEeCeeEEEEecCCc------------cCCCeEEeEEEecC
Q psy16562 390 -HFFKV----QRDKRYLMRIIGGS--CLACPLIFTIEKHQLQVIASDGT------------AVEPLVVDSVTLFP 445 (445)
Q Consensus 390 -~~~~v----~~G~~~~~rliN~s--~~~Hp~~~hihgh~f~Vi~~dG~------------~~~p~~~Dtv~v~p 445 (445)
..+.+ +.|++++|.|.|.+ ...||| |||||+|+||+.+.. ...|.++||+.|.|
T Consensus 434 ~~~~~~~~~~~~~~~VeiVi~n~~~~~~~HP~--HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~ 506 (580)
T 3sqr_A 434 YNVVALEQTNANEEWVVYVIEDLTGFGIWHPI--HLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPG 506 (580)
T ss_dssp GCEEEECC----CCEEEEEEEECSSSCCCEEE--EESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECT
T ss_pred cceeecccccCCCcEEEEEEeCCCccccceee--EecCceEEEEecCCCccCccccccccccCCCceeeEEEeCC
Confidence 01233 45999999999987 678888 999999999988432 12378999999975
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-69 Score=569.68 Aligned_cols=347 Identities=27% Similarity=0.435 Sum_probs=280.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCC-eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
++++|+|+|++. .+.+|| .++.+|+|||++|||+|+|++||+|+|+|+|+|+.++|+
T Consensus 1 ~~~~~~~~v~~~----------------------~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~ts 58 (534)
T 1zpu_A 1 ETHTFNWTTGWD----------------------YRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTS 58 (534)
T ss_dssp CEEEEEEEEEEE----------------------EECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBC
T ss_pred CEEEEEEEEEEE----------------------EecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCee
Confidence 478999999974 357899 799999999999999999999999999999999878999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||||++|.+++||||+|++|||||+||++|+|+|++. ++||||||||.+.|+++||+|+|||+++. +| +++|
T Consensus 59 iHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~p----~~~d 132 (534)
T 1zpu_A 59 MHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDS--FP----YDYD 132 (534)
T ss_dssp CEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTT--CC----SCCS
T ss_pred EEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCC--CC----CCCc
Confidence 99999999998999999999999999999999999999 99999999999999999999999999874 23 2444
Q ss_pred CcceEEEEeeeeccCCCCcc---CCCCC-CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 214 LYSHVIIVTDWMHSMTDSKF---PGNTY-NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~---~~~~~-~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
.|++|+|+||+++...+.+ ..... ......++.+||||+.. +.++|++|++|||||||++.. +
T Consensus 133 -~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~d~~liNG~~~-----------~~~~v~~g~~~RlRliNa~~~-~ 199 (534)
T 1zpu_A 133 -EELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIPQNLIVNNTMN-----------LTWEVQPDTTYLLRIVNVGGF-V 199 (534)
T ss_dssp -EEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCCSEEEETTBSS-----------CEEECCSSCEEEEEEEECCSS-C
T ss_pred -ceEEEEeeccccCCHHHHHHHHhccccCCCCCCCCceEEECCCCc-----------eEEEEECCCEEEEEEEeccCC-c
Confidence 3799999999998654321 11111 12345789999999964 489999999999999999987 4
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCC-CceEEEEEEec--C-------CCceeeEEEEEc
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS-NNLYWMQAKTL--C-------DSITAEAVLQYE 359 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~-~G~y~~~~~~~--~-------~~~~~~ail~y~ 359 (445)
.+.|+|++|.|+||++||++++|..++.+.|+|||||||+|++++. .|+||+++... + ......++|+|.
T Consensus 200 ~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~ 279 (534)
T 1zpu_A 200 SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYN 279 (534)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESC
T ss_pred eEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeC
Confidence 7999999999999999999999999999999999999999999864 47899998765 2 134567999998
Q ss_pred CCCCCCCC----CCCC-CC----------CC-----------------CCCC--CCCCCCCCc-----------------
Q psy16562 360 GEKLTYVS----KRPK-SD----------SF-----------------PRGK--PKDNSPRVP----------------- 388 (445)
Q Consensus 360 ~~~~~~~~----~~P~-~~----------~~-----------------~~~~--~~~~~~~~~----------------- 388 (445)
+....+.+ ..+. .+ .+ .++. ...|+..+.
T Consensus 280 ~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~ 359 (534)
T 1zpu_A 280 KTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQA 359 (534)
T ss_dssp TTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGT
T ss_pred CCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeecccCccc
Confidence 76432110 1111 00 00 0000 001111110
Q ss_pred ---------cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCc--------------------cCCCeEEe
Q psy16562 389 ---------MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGT--------------------AVEPLVVD 439 (445)
Q Consensus 389 ---------~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~--------------------~~~p~~~D 439 (445)
...+.++.|++++|.|.|.+.+.||| |||||+|+||++++. ...|.|||
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~HP~--HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RD 437 (534)
T 1zpu_A 360 NNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTHPF--HLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRD 437 (534)
T ss_dssp TCGGGGCSSSCEEEECTTCEEEEEEEECSSSCEEE--EETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEES
T ss_pred CCCcccCCCceEEEeCCCCEEEEEEeCCCCCCCCe--EecCCceEEEeecCCccccccCcccccCccccccccCCCCeee
Confidence 12478999999999999999899998 999999999998853 12378999
Q ss_pred EEEecC
Q psy16562 440 SVTLFP 445 (445)
Q Consensus 440 tv~v~p 445 (445)
||.|.|
T Consensus 438 Tv~V~p 443 (534)
T 1zpu_A 438 TLYVRP 443 (534)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 999975
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-68 Score=561.66 Aligned_cols=358 Identities=31% Similarity=0.555 Sum_probs=284.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---- 130 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~---- 130 (445)
...+|+|+|++. .+.+||+ ++.+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 22 ~~~~~~l~i~~~----------------------~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~ 79 (521)
T 1v10_A 22 ATVALDLHILNA----------------------NLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMR 79 (521)
T ss_dssp CCSEEEEEEEEE----------------------EECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSC
T ss_pred cCceEEEEEEEE----------------------EEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCC
Confidence 455799998863 4678999 9999999999999999999999999999999983
Q ss_pred CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 131 REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 131 ~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||||+++.+++||||+|++|||||+||++|+|+|++ .++||||||||.+.|+++||+|+|||+++. ++....
T Consensus 80 ~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~ 157 (521)
T 1v10_A 80 RATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--DPHLSL 157 (521)
T ss_dssp CCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGG
T ss_pred CCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc--cccccc
Confidence 79999999999998899999999999999999999999995 689999999999999999999999999874 344456
Q ss_pred cccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
|+.|..|++|+|+||+++...+.... .......++.++|||++.+.+. ....+.+.++|++|++|||||||++.. +
T Consensus 158 ~~~d~~e~~l~l~D~~~~~~~~~~~~--~~~~~~~~d~~liNG~~~~~~~-~~~~~~~~~~v~~G~~~RlRliNa~~~-~ 233 (521)
T 1v10_A 158 YDVDDASTVITIADWYHSLSTVLFPN--PNKAPPAPDTTLINGLGRNSAN-PSAGQLAVVSVQSGKRYRFRIVSTSCF-P 233 (521)
T ss_dssp CSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSC-GGGSCCCEEEECTTCEEEEEEEECCSS-C
T ss_pred CCCCCceeEEEEcccccCCHHHHhhc--cCCCCCCCCEEEECCcccCCCC-CCCCCceEEEECCCCEEEEEEEecCCc-c
Confidence 77765689999999999877653211 1122356899999999874321 112345799999999999999999987 4
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC---ceeeEEEEEcCCCCC
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS---ITAEAVLQYEGEKLT 364 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~---~~~~ail~y~~~~~~ 364 (445)
.+.|+|+||.|+||++||.+++|..++++.|+|||||||+|++++.+|+||++++.. +.. ....++|+|.+....
T Consensus 234 ~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~ 313 (521)
T 1v10_A 234 NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVA 313 (521)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSC
T ss_pred cEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCC
Confidence 899999999999999999999999999999999999999999998789999999875 221 123589999875432
Q ss_pred -CCCC-------------------CCCC------C---CCC---CCC--CC-CCCCCCc---------------------
Q psy16562 365 -YVSK-------------------RPKS------D---SFP---RGK--PK-DNSPRVP--------------------- 388 (445)
Q Consensus 365 -~~~~-------------------~P~~------~---~~~---~~~--~~-~~~~~~~--------------------- 388 (445)
+... .|.. + .+. ++. .+ .|+..+.
T Consensus 314 ~p~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~ 393 (521)
T 1v10_A 314 EPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLL 393 (521)
T ss_dssp CCCCCCCCSCBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSS
T ss_pred CCCCCCCcccccchhhcccCCcccCCCcccCCcceEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCC
Confidence 1100 0000 0 000 000 11 1111111
Q ss_pred --cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEe-cC
Q psy16562 389 --MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTL-FP 445 (445)
Q Consensus 389 --~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v-~p 445 (445)
...+.++.|++++|.++| .+.||| |||||+|+|++++|... .|.|||||.| .|
T Consensus 394 ~~~~~~~v~~g~~vei~l~N--~~~HP~--HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~ 453 (521)
T 1v10_A 394 PGGAVISLPANQVIEISIPG--GGNHPF--HLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGG 453 (521)
T ss_dssp STTTEEEECTTCEEEEEEEC--CBSCEE--EESSCCEEEEECTTCSCCCCSSCCEESEEECCBS
T ss_pred CCceEEEecCCCEEEEEEcC--CCCCCE--EEccceEEEEecCCCCccccCCCCeeeeEEeCCC
Confidence 124678999999999999 678998 99999999999998763 4899999999 54
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-67 Score=554.35 Aligned_cols=341 Identities=34% Similarity=0.593 Sum_probs=274.6
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCce
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
.+.+||+++.+|+|||++ ||+|+|++||+|+|+|+|+|+. ++|||||||+++.+++||||+|++|||||+||++|
T Consensus 15 ~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~ 93 (503)
T 1hfu_A 15 NVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAF 93 (503)
T ss_dssp EECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEE
T ss_pred EECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeE
Confidence 467899999999999999 9999999999999999999983 79999999999998889999999999999999999
Q ss_pred EEEEec-CCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCC
Q psy16562 166 RYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIK 244 (445)
Q Consensus 166 ~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 244 (445)
+|+|++ .++||||||||.+.|+++||+|+|||+++. ++....|+.|..|++|+|+||+++...+. . . ...
T Consensus 94 ~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~--~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-~-~-----~~~ 164 (503)
T 1hfu_A 94 LYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN--DPHAALYDEDDENTIITLADWYHIPAPSI-Q-G-----AAQ 164 (503)
T ss_dssp EEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT--CTTGGGCSBCSTTSEEEEEEECSSCGGGC-C---------C
T ss_pred EEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC--CCcccCCCCCCceEEEEEcccccCChHHh-c-C-----CCC
Confidence 999994 689999999999999999999999999874 34445677765689999999999876542 1 1 146
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
++.+||||++.+.+ ....+.+.|+|++|++|||||||++.. +.+.|+|++|.|+||++||.+++|..++++.|+|||
T Consensus 165 ~d~~liNG~~~~~~--~~~~~~~~~~v~~g~~~RlRliN~~~~-~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pge 241 (503)
T 1hfu_A 165 PDATLINGKGRYVG--GPAAELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 241 (503)
T ss_dssp CSEEEETTBCCBTT--CCCCCCCEEEECTTCEEEEEEEECCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTC
T ss_pred CCEEEECcccccCC--CCCCcceEEEEcCCCEEEEEEEecCCc-ccEEEEEcCceEEEEeccCccccccccCeEEEcccc
Confidence 89999999987532 123445899999999999999999987 479999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CCC-------ceeeEEEEEcCCCCC-CCCC-CCCC------C-------CCCC---
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CDS-------ITAEAVLQYEGEKLT-YVSK-RPKS------D-------SFPR--- 377 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~~-------~~~~ail~y~~~~~~-~~~~-~P~~------~-------~~~~--- 377 (445)
||||+|++++.+|+||+++... +.. ....++|+|.+.... +... .|.. . ..+.
T Consensus 242 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l~~~~l~p~~~~~~p~~~~ 321 (503)
T 1hfu_A 242 RYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDPAAPGIPT 321 (503)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCCBCCGGGCBBSSSCSCSSCSS
T ss_pred eEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccCCCccccccccCccCCCCccc
Confidence 9999999998789999999865 111 123689999876432 1110 0100 0 0000
Q ss_pred --C-------------CCC-CCCCCCc-----------------------cceeEeeCCcEEEEEEE-cCCCCccceEEE
Q psy16562 378 --G-------------KPK-DNSPRVP-----------------------MHFFKVQRDKRYLMRII-GGSCLACPLIFT 417 (445)
Q Consensus 378 --~-------------~~~-~~~~~~~-----------------------~~~~~v~~G~~~~~rli-N~s~~~Hp~~~h 417 (445)
. ..+ .|+..+. ...+.++.|+++++.++ |.+.+.||| |
T Consensus 322 ~~~~~~~~~l~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~~n~~~~~HP~--H 399 (503)
T 1hfu_A 322 PGAADVNLRFQLGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPRNQVVELVVPAGVLGGPHPF--H 399 (503)
T ss_dssp TTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECSSCEEEEEEECCSTTCCCEE--E
T ss_pred CCcceEEEEEEeeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccCCCEEEEEEECCCCCCCCCE--E
Confidence 0 000 1111110 12467899999999999 456788998 9
Q ss_pred EeCeeEEEEecCCccC----CCeEEeEEEe-cC
Q psy16562 418 IEKHQLQVIASDGTAV----EPLVVDSVTL-FP 445 (445)
Q Consensus 418 ihgh~f~Vi~~dG~~~----~p~~~Dtv~v-~p 445 (445)
||||+|+|++++|... .|.|||||.| .|
T Consensus 400 LHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~pp 432 (503)
T 1hfu_A 400 LHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVT 432 (503)
T ss_dssp ETTCCEEEEECTTCCCCCCSSBCEESEEECCST
T ss_pred EecceEEEEecCCCCccccCCCCeeeeEEecCC
Confidence 9999999999998763 4899999999 54
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-66 Score=552.92 Aligned_cols=278 Identities=31% Similarity=0.496 Sum_probs=236.4
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeE-EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~-~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
..++++|+|++++.. ..+.+||++ +.+|+|||++|||+|+|++||+|+|+|+|+|+.++
T Consensus 30 ~~~~~~~~l~~~~~~--------------------~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~ 89 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVD--------------------NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNG 89 (559)
T ss_dssp CCCEEEEEEEEEEEE--------------------EEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCC
T ss_pred CCeEEEEEEEEEEeE--------------------eeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCC
Confidence 456788999888642 236689998 99999999999999999999999999999996589
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCC-CCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPS-STTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYD 211 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~p-G~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d 211 (445)
|||||||+++.+++||||+|++|||||+| |++|+|+|++.++||||||||.+.|+++||+|+|||+++.. ..||
T Consensus 90 tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-----~~~d 164 (559)
T 2q9o_A 90 TSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS-----LPYD 164 (559)
T ss_dssp BCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS-----SCCS
T ss_pred ceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc-----CCCc
Confidence 99999999999889999999999999999 99999999999999999999999999999999999998743 2355
Q ss_pred cCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 212 FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 212 ~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
.| ..+|+|+||+++...+.+... .......++.++|||+..+.+ ..+...+.++|++|++|||||||++.. +.+
T Consensus 165 ~d--~~~l~l~Dw~~~~~~~~~~~~-~~~~~~~~d~~liNG~~~~~~--~~~g~~~~~~v~~g~~~RlRliNa~~~-~~~ 238 (559)
T 2q9o_A 165 ID--LGVFPITDYYYRAADDLVHFT-QNNAPPFSDNVLINGTAVNPN--TGEGQYANVTLTPGKRHRLRILNTSTE-NHF 238 (559)
T ss_dssp EE--EEEEEEEEECSSCHHHHHHHH-TTSCCCCBSEEEETTBCBCTT--TCCBCCCEEEECTTCEEEEEEEECCSS-CCE
T ss_pred cc--ceEEEEeccccCCHHHHhhhh-hcCCCCccceeEECCccccCc--CCCCCceEEEEcCCCEEEEEEEecCCC-ceE
Confidence 44 249999999998665422111 112345689999999987532 122345789999999999999999987 478
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe--c--C---CCceeeEEEEEcCCC
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT--L--C---DSITAEAVLQYEGEK 362 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~--~--~---~~~~~~ail~y~~~~ 362 (445)
.|+|+||.|+||++||.+++|..++.+.|+|||||||+|++++.+|+||+++.. . | ......++|+|.+..
T Consensus 239 ~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~ 316 (559)
T 2q9o_A 239 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 316 (559)
T ss_dssp EEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred EEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCC
Confidence 999999999999999999999999999999999999999999888999999987 3 3 334568999998764
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-65 Score=526.39 Aligned_cols=324 Identities=18% Similarity=0.260 Sum_probs=256.6
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
.||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|||||||++++++ |||+| ||+|+||++|+|+|++.
T Consensus 33 ~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~~--~DG~~---~~~i~PG~~~~Y~f~~~ 106 (451)
T 2uxt_A 33 TPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPGP--LMGGP---ARMMSPNADWAPVLPIR 106 (451)
T ss_dssp CSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCGG--GSCSG---GGCBCTTCEECCEEECC
T ss_pred CCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCC-CCccEEECCccCCCC--CCCCC---cCcCCCCCeEEEEEEcC
Confidence 3788999999999999999999999999999999998 899999999999874 99998 89999999999999998
Q ss_pred C-CcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCC
Q psy16562 173 P-SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPD 246 (445)
Q Consensus 173 ~-~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 246 (445)
+ +||||||||. +.|+++||+|+|||+++.+.. +....|+ ..|++|+|+||+++...+.... .....+..++
T Consensus 107 ~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~--~~e~~l~l~D~~~~~~~~~~~~-~~~~~~~~~d 183 (451)
T 2uxt_A 107 QNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYG--VDDFPVIIQDKRLDNFGTPEYN-EPGSGGFVGD 183 (451)
T ss_dssp SCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBT--TTEEEEEEEEEEECTTSCEECC-CCSSSCCCCS
T ss_pred CCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCC--CceEEEEEEeeecCCCCceecc-cccCCCCcCC
Confidence 5 9999999998 789999999999999874321 1112232 2389999999999876553321 1234567789
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCc
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGD 324 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGe 324 (445)
.++|||+.. |.|+|++| +|||||+|++.. +.+.|+| +||.|+||++||+++ +|..++++.|+|||
T Consensus 184 ~~liNG~~~-----------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pge 250 (451)
T 2uxt_A 184 TLLVNGVQS-----------PYVEVSRG-WVRLRLLNASNS-RRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGE 250 (451)
T ss_dssp EEEETTEES-----------CEEEECSS-EEEEEEEECCSS-CCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTC
T ss_pred EEEECCccc-----------ceEEecCC-EEEEEEEccCCc-eeEEEEECCCCeEEEEEeCCCccCCceEeceEEECcee
Confidence 999999976 48999999 999999999987 5899999 899999999999998 69999999999999
Q ss_pred eEEEEEecCCCCceEEEEEEec--CC-----------CceeeEEEEEcCCCCC--CCCCCCC----CCCCC---------
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL--CD-----------SITAEAVLQYEGEKLT--YVSKRPK----SDSFP--------- 376 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~--~~-----------~~~~~ail~y~~~~~~--~~~~~P~----~~~~~--------- 376 (445)
||||+|++++ +|+||+++... +. .....++++|...... ....+|. .....
T Consensus 251 R~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~~~~~~~~~ 329 (451)
T 2uxt_A 251 RREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDI 329 (451)
T ss_dssp EEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCCSCSSSSCCCCCCCSEEEEE
T ss_pred EEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCccccCCCCCCCCCCcceEEE
Confidence 9999999997 68999998764 11 1223578888754321 1111111 10000
Q ss_pred --CCCCCCCCCCCcc--ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEe
Q psy16562 377 --RGKPKDNSPRVPM--HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTL 443 (445)
Q Consensus 377 --~~~~~~~~~~~~~--~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v 443 (445)
...-..|+..+.. ..+.++.|++++|+|+|. +.||| |||||+|||+++||.++. |.|+|||.|
T Consensus 330 ~l~~~~~iNg~~f~~~~~~~~~~~G~~~~~~l~N~--~~HP~--HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v 399 (451)
T 2uxt_A 330 SLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRAD--EPQAF--HIEGVMFQIRNVNGAMPFPEDRGWKDTVWV 399 (451)
T ss_dssp EECSSSSBTTBCCCTTCCCEEEETTCEEEEEEEEE--EEEEE--EETTCEEEEEEETTBCCCGGGSSCBSEEEE
T ss_pred EEeeEEEECCEeCCCCCCcEEcCCCCEEEEEEECC--CCcCe--EECCceEEEEeeCCcCCCcccCCCccEEEE
Confidence 0011133333332 247899999999999997 67888 999999999999998764 789999987
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-63 Score=512.78 Aligned_cols=340 Identities=21% Similarity=0.304 Sum_probs=268.0
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
+.+.+|+++++.. .+..||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|+
T Consensus 14 ~~~~~~~l~~~~~----------------------~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~ts 70 (439)
T 2xu9_A 14 GGLLSLKLSATPT----------------------PLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLP-EPTN 70 (439)
T ss_dssp TTEEEEEEEEEEE----------------------EEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSS-SCBC
T ss_pred CCeEEEEEEEEEE----------------------EEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCC-CCcc
Confidence 4567888888764 3456799999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC--CCcceEEeccc----chhhhcCceeEEEEeCCCCCCCCCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM--PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTADPHAE 208 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~--~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~p~~~ 208 (445)
|||||+++.. ++||++ ++|+||++|+|+|+++ ++||||||||. +.|+++||+|+|||+++.+..+
T Consensus 71 iHwHG~~~~~--~~DG~~----~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~--- 141 (439)
T 2xu9_A 71 LHWHGLPISP--KVDDPF----LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIP--- 141 (439)
T ss_dssp CEEETCCCCT--TTSCTT----CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSH---
T ss_pred eEeCCCCCCc--cccCCc----ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCc---
Confidence 9999999865 899986 3699999999999985 79999999996 6899999999999998643211
Q ss_pred ccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
....+ .|++|+|+||+++..............+..++.++|||+.. |.++|++| +|||||+|++..
T Consensus 142 ~~~~~-~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~~-----------p~l~v~~g-~~RlRliN~~~~- 207 (439)
T 2xu9_A 142 ELREA-EEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGALR-----------PTLVAQKA-TLRLRLLNASNA- 207 (439)
T ss_dssp HHHTS-EEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEES-----------CEEECSSS-EEEEEEEECCSS-
T ss_pred cCCCC-CcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCccC-----------CcEEecCC-eEEEEEEecCCC-
Confidence 11222 38999999999886411000000011235678999999965 48999999 999999999987
Q ss_pred eeEEEEecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC-----------------
Q psy16562 289 CPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD----------------- 348 (445)
Q Consensus 289 ~~~~~~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~----------------- 348 (445)
+.+.|+|+||.|+||++||+++ +|..++++.|+||||||++|++++ +|+||++++.. +.
T Consensus 208 ~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (439)
T 2xu9_A 208 RYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGP 286 (439)
T ss_dssp CCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCS
T ss_pred ceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCC
Confidence 4799999999999999999998 699999999999999999999998 89999999754 21
Q ss_pred -CceeeEEEEEcCCCCCCCCCCCC----CCCCCC--------------CCC-CCCCCCCcc--ceeEeeCCcEEEEEEEc
Q psy16562 349 -SITAEAVLQYEGEKLTYVSKRPK----SDSFPR--------------GKP-KDNSPRVPM--HFFKVQRDKRYLMRIIG 406 (445)
Q Consensus 349 -~~~~~ail~y~~~~~~~~~~~P~----~~~~~~--------------~~~-~~~~~~~~~--~~~~v~~G~~~~~rliN 406 (445)
.....++|+|.+.... .++|. ...+.. +.. ..|+..+.. ..+.++.|++++|+|+|
T Consensus 287 ~~~~~~~~l~~~~~~~~--~~~p~~l~~~~~l~~~~~~r~~~l~~~~~g~~~~iNg~~~~~~~~~~~~~~g~~~~~~~~N 364 (439)
T 2xu9_A 287 SRPETLLYLIAPKNPKP--LPLPKALSPFPTLPAPVVTRRLVLTEDMMAARFFINGQVFDHRRVDLKGQAQTVEVWEVEN 364 (439)
T ss_dssp CCCEEEEEEEECSSCCC--CCCCSCCCCCCCCCCCSEEEEEEEEEEGGGTEEEETTBCCCTTCCCEEECTTCEEEEEEEE
T ss_pred CCcceeEEEEecCCCcc--ccCcccCCCcccCCCCCcceEEEEEeeccCceEeECCEECCCCCCceecCCCCEEEEEEEc
Confidence 1245688999875421 11111 001100 000 123333322 24789999999999999
Q ss_pred CCCCccceEEEEeCeeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 407 GSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 407 ~s~~~Hp~~~hihgh~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
.+.+.||| |||||+|+|++++|.+.. |.|||||.|.|
T Consensus 365 ~~~~~HP~--HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p 402 (439)
T 2xu9_A 365 QGDMDHPF--HLHVHPFQVLSVGGRPFPYRAWKDVVNLKA 402 (439)
T ss_dssp CSSSCEEE--EESSCCBEEEEETTEECSSCCCBSEEEECT
T ss_pred CCCCCCCc--eeCCCcEEEEeeCCCCCCCCCCeEEEEeCC
Confidence 99999998 999999999999998764 89999999975
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-62 Score=509.28 Aligned_cols=342 Identities=21% Similarity=0.308 Sum_probs=264.6
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
....+.+|+|+++... ....+|.++.+|+|||++|||+|||++||+|+|+|+|+|+ ++
T Consensus 46 ~~~~~~~~~L~~~~~~---------------------~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~-~~ 103 (481)
T 3zx1_A 46 KEKNIFHATLEIKENH---------------------IELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLK-EA 103 (481)
T ss_dssp CSTTEEEEEEEEEEEE---------------------ECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSS-SC
T ss_pred cCCCeEEEEEEEEEEE---------------------EEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCC-CC
Confidence 3578899999999753 2335788999999999999999999999999999999998 89
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC--CcceEEeccc----chhhhcCceeEEEEeCCCCCCCC
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP--SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTADPH 206 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~--~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~p~ 206 (445)
|||||||+++.+ +|||+| ||+|+||++|+|+|++++ +||||||||. +.|+++||+|+|||+++++.
T Consensus 104 tsiHwHGl~~~~--~~DG~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~--- 175 (481)
T 3zx1_A 104 TTIHWHGVPVPP--DQDGSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDA--- 175 (481)
T ss_dssp BCCEEETCCCCG--GGSCCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCT---
T ss_pred eeEEecCcccCC--ccCCCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCcccc---
Confidence 999999999854 899996 899999999999999985 8999999995 68999999999999987432
Q ss_pred CCccccCCcceEEEEeeeeccCCCCccCCC-CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccC
Q psy16562 207 AELYDFDLYSHVIIVTDWMHSMTDSKFPGN-TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGS 285 (445)
Q Consensus 207 ~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~-~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~ 285 (445)
.++++ +..|+|+||+++..++..... .....+..++.++|||+.+ |.++|++|+ ||||+|++
T Consensus 176 --~~~~~--~~~l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~-----------p~l~v~~g~--RlRliNa~ 238 (481)
T 3zx1_A 176 --LSHLK--EKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK-----------PKIKLATNE--RIRIYNAT 238 (481)
T ss_dssp --TTTSE--EEEEEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES-----------CEEEEETTE--EEEEEECC
T ss_pred --ccCCC--ceeEEEEEEeccCCCccccccchhhccCCcCCEEEECCccC-----------ceEEecCCC--EEEEEecC
Confidence 23444 344999999998765522110 0112345789999999976 489999998 99999999
Q ss_pred CCceeEEEEecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC-------CCceee--EE
Q psy16562 286 CLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC-------DSITAE--AV 355 (445)
Q Consensus 286 ~~~~~~~~~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~-------~~~~~~--ai 355 (445)
.. +.+.|+|++|.|+||++||.++ +|..++.+.|+|||||||+|++++ +++|.+.+.... ...... ..
T Consensus 239 ~~-~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~ 316 (481)
T 3zx1_A 239 AA-RYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLAN 316 (481)
T ss_dssp SS-CCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEE
T ss_pred CC-eEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEE
Confidence 87 5899999999999999998776 599999999999999999999987 688888774431 011222 33
Q ss_pred EEEcCCCCCCCC---CCCCCC--------CCCCCC---------------------CCCCCCCCc--cceeEeeCCcEEE
Q psy16562 356 LQYEGEKLTYVS---KRPKSD--------SFPRGK---------------------PKDNSPRVP--MHFFKVQRDKRYL 401 (445)
Q Consensus 356 l~y~~~~~~~~~---~~P~~~--------~~~~~~---------------------~~~~~~~~~--~~~~~v~~G~~~~ 401 (445)
+++.+.+...+. +.|... .+.... -..|+..+. ...+.++.|++++
T Consensus 317 ~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~~~~~G~~v~ 396 (481)
T 3zx1_A 317 INLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDLKRIDLSSKLGVVED 396 (481)
T ss_dssp EEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCTTCCCEEEETTCCEE
T ss_pred EecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhcccccccccccccccccceeEECCEeCCCCCceEEeCCCCEEE
Confidence 334332111111 111110 000000 012333332 1248899999999
Q ss_pred EEEEcCCCCccceEEEEeCeeEEEEec--CCccCC---CeEEeEEEecC
Q psy16562 402 MRIIGGSCLACPLIFTIEKHQLQVIAS--DGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 402 ~rliN~s~~~Hp~~~hihgh~f~Vi~~--dG~~~~---p~~~Dtv~v~p 445 (445)
|+|+|.+.+.||| |||||+|||+++ +|..+. +.|+|||.|.|
T Consensus 397 w~l~N~~~~~Hp~--HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~P 443 (481)
T 3zx1_A 397 WIVINKSHMDHPF--HIHGTQFELISSKLNGKVQKAEFRALRDTINVRP 443 (481)
T ss_dssp EEEEECSSSCEEE--EETTCCEEEEEEEETTEEEECSSCCEESEEEECT
T ss_pred EEEEcCCCCceeE--EEeccEEEEEEecccCCCCCcccCcccceEEECC
Confidence 9999999999998 999999999999 998763 68999999986
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-62 Score=509.46 Aligned_cols=342 Identities=22% Similarity=0.296 Sum_probs=260.7
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
...|+|+++... +..+|.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+||
T Consensus 17 ~~~~~l~~~~~~----------------------~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiH 73 (488)
T 3od3_A 17 RNRIQLTIGAGQ----------------------STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETTLH 73 (488)
T ss_dssp TSEEEEEEEEEE----------------------EEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred CeeEEEEEEEEE----------------------EccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCc-CceeEe
Confidence 457999998653 223899999999999999999999999999999999999 899999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-CcceEEeccc----chhhhcCceeEEEEeCCCCCC-CCCCcc
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD-PHAELY 210 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~-p~~~~~ 210 (445)
|||+++.+ ++||+| ||+|+||++|+|+|++.+ +||||||||. +.|+++||+|+|||+++.+.. +....|
T Consensus 74 wHG~~~~~--~~DG~p---~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y 148 (488)
T 3od3_A 74 WHGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQW 148 (488)
T ss_dssp EETCCCCH--HHHCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCB
T ss_pred ecccccCc--ccCCCC---cCcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccC
Confidence 99999976 799997 899999999999999986 7999999996 689999999999999875422 122335
Q ss_pred ccCCcceEEEEeeeeccCCCCccCCCC--CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 211 DFDLYSHVIIVTDWMHSMTDSKFPGNT--YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 211 d~d~~e~~l~l~D~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
+.| |++|+|+||+++..++...... ....+..++.++|||+.++ .+.+ +|++|||||||++..
T Consensus 149 ~~~--d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p-----------~~~v-~g~~~RlRliNas~~- 213 (488)
T 3od3_A 149 GID--DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP-----------QHAA-PRGWLRLRLLNGCNA- 213 (488)
T ss_dssp TTT--EEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSSC-----------EEEE-EEEEEEEEEEECCSS-
T ss_pred Ccc--ceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcCc-----------cEec-CCCEEEEEEEccCCC-
Confidence 555 8999999999976654222110 0123467899999999764 5655 578999999999986
Q ss_pred eeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec---C----CCceeeEEEEEc
Q psy16562 289 CPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL---C----DSITAEAVLQYE 359 (445)
Q Consensus 289 ~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~----~~~~~~ail~y~ 359 (445)
+.+.|+| ++|.|+||++||+++ +|..++++.|+|||||||+|++++ .+.|++.+... . .......+++..
T Consensus 214 ~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 292 (488)
T 3od3_A 214 RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQ 292 (488)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTSCEEEEEEE
T ss_pred ceeeeeecCCCeEEEEEeCCCcccCccEeceEEECCCCEEEEEEEeCC-CceEEEEEeccCCCCcccccccCccceeEec
Confidence 5899999 699999999999987 699999999999999999999997 67898877543 1 001111233322
Q ss_pred C-----CCCCCC-----CCCCCCCC-------C-C----------------------------------CC-C-------
Q psy16562 360 G-----EKLTYV-----SKRPKSDS-------F-P----------------------------------RG-K------- 379 (445)
Q Consensus 360 ~-----~~~~~~-----~~~P~~~~-------~-~----------------------------------~~-~------- 379 (445)
. ....|. +.+|+... + . .+ .
T Consensus 293 ~~~~~~~~~~P~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 372 (488)
T 3od3_A 293 PIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGG 372 (488)
T ss_dssp EEEEECCCCCCSCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCG
T ss_pred ccccCCCCCCCcccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccc
Confidence 1 111110 11122110 0 0 00 0
Q ss_pred --C-----CCCCCCCcc--ceeEeeCCcEEEEEEEcCC-CCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEec
Q psy16562 380 --P-----KDNSPRVPM--HFFKVQRDKRYLMRIIGGS-CLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLF 444 (445)
Q Consensus 380 --~-----~~~~~~~~~--~~~~v~~G~~~~~rliN~s-~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~ 444 (445)
. ..|+..++. ..++++.|++++|+|+|.+ .+.||| |||||+|+|+++||.++. +.|+|||.|.
T Consensus 373 ~~~~~~~~~ING~~~~~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~--HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~ 448 (488)
T 3od3_A 373 KFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPF--HIHGTQFRILSENGKPPAAHRAGWKDTVKVE 448 (488)
T ss_dssp GGCGGGCEEETTBCCCTTCCSEECCBSSCEEEEEECTTCCCCEEE--EETTCCBEEEEBTTBCCCGGGSSSBSEEEES
T ss_pred cccccceeeECCeeCCCCCCceEcCCCCEEEEEEEeCCCCCCccE--EEcCceEEEeccCCCccccccCCceeEEEeC
Confidence 0 123333331 2478999999999999998 678887 999999999999999876 4699999985
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-61 Score=504.75 Aligned_cols=334 Identities=21% Similarity=0.282 Sum_probs=252.7
Q ss_pred ecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC---------------------CCceEeeCCcccCCCCCCC
Q psy16562 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---------------------REVTLHWHGVYQKVTPWMD 149 (445)
Q Consensus 91 ~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~---------------------~~tsiHwHG~~~~~~~~~D 149 (445)
+.+++.++.+|+|||++|||+|+|++||+|+|+|+|+|+. ++|||||||+++.. +||
T Consensus 39 ~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~--~~D 116 (513)
T 2wsd_A 39 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPD--DSD 116 (513)
T ss_dssp SSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCG--GGS
T ss_pred eCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCC--ccC
Confidence 4456678999999999999999999999999999999973 28999999999974 799
Q ss_pred CCCc--ccccCCCCCCce---EEEEecC-CCcceEEecccc----hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEE
Q psy16562 150 GVPM--VTQCPIPSSTTF---RYKFPAM-PSGTFFYHSHVG----LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVI 219 (445)
Q Consensus 150 Gvp~--~tq~pI~pG~~~---~Y~f~~~-~~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l 219 (445)
|+|+ ++||+|+||++| +|+|++. ++||||||||.. .|+++||+|+|||+++.+.......+++ |++|
T Consensus 117 G~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~---d~~l 193 (513)
T 2wsd_A 117 GYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEY---DVPL 193 (513)
T ss_dssp CCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGG---EEEE
T ss_pred CCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCC---cEEE
Confidence 9996 799999999555 9999986 799999999984 5899999999999987532211112333 7999
Q ss_pred EEeeeeccCCCCccCCCC-----------CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 220 IVTDWMHSMTDSKFPGNT-----------YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 220 ~l~D~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
+|+||+++...+.+.... ....+..++.+||||+.++ .++|+++ +|||||||++..
T Consensus 194 ~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~p-----------~~~v~~~-~~RlRliNa~~~- 260 (513)
T 2wsd_A 194 LITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-----------YLEVEPR-KYRFRVINASNT- 260 (513)
T ss_dssp EEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-----------EEECCSS-EEEEEEEECCSS-
T ss_pred EEEeeecCCCCceecccccccccccccccccccccccceEEECCcccc-----------eEEecCC-EEEEEEEccCCc-
Confidence 999999887654322210 0123457899999999864 7899875 899999999987
Q ss_pred eeEEEEeccc-ceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCC----ceeeEEEEEcC
Q psy16562 289 CPLIFTIEKH-QLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDS----ITAEAVLQYEG 360 (445)
Q Consensus 289 ~~~~~~i~gh-~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~----~~~~ail~y~~ 360 (445)
+.+.|+|++| .|+||++||+++ +|..++.+.|+|||||||+|++++.+|. |+..... |.. ....++++|..
T Consensus 261 ~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~ 339 (513)
T 2wsd_A 261 RTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGE-SIILANSAGCGGDVNPETDANIMQFRV 339 (513)
T ss_dssp CCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTC-EEEEEECCCSSSSCCTTTTTEEEEEEC
T ss_pred ceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCc-EEEEEecccccccCCCCCCcceEEEEe
Confidence 5899999999 999999999998 6999999999999999999999986676 3333332 311 23457888875
Q ss_pred CCC--C-CCCCCCCC----CCCC----------------CCC----CCCCCCCCc-cceeEeeCCcEEEEEEEcCCCCcc
Q psy16562 361 EKL--T-YVSKRPKS----DSFP----------------RGK----PKDNSPRVP-MHFFKVQRDKRYLMRIIGGSCLAC 412 (445)
Q Consensus 361 ~~~--~-~~~~~P~~----~~~~----------------~~~----~~~~~~~~~-~~~~~v~~G~~~~~rliN~s~~~H 412 (445)
... . ....+|.. ..++ ... -..|+..+. ...+.++.|++++|.|+|.+.+.|
T Consensus 340 ~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~H 419 (513)
T 2wsd_A 340 TKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQDEYGRPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTH 419 (513)
T ss_dssp CSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEECTTSCEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCE
T ss_pred ccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeecCCCCCceEeECCccCCCcccEecCCCCEEEEEEEcCCCCCc
Confidence 431 1 11111110 0000 000 012232222 124678999999999999998999
Q ss_pred ceEEEEeCeeEEEEecCCc---------------cC------CCeEEeEEEecC
Q psy16562 413 PLIFTIEKHQLQVIASDGT---------------AV------EPLVVDSVTLFP 445 (445)
Q Consensus 413 p~~~hihgh~f~Vi~~dG~---------------~~------~p~~~Dtv~v~p 445 (445)
|| |||||+|||+++++. +. .+.|+|||.|.|
T Consensus 420 P~--HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~p 471 (513)
T 2wsd_A 420 PI--HLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHA 471 (513)
T ss_dssp EE--EESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECT
T ss_pred CE--eEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCC
Confidence 98 999999999998752 11 246999999976
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-60 Score=502.55 Aligned_cols=345 Identities=19% Similarity=0.245 Sum_probs=263.0
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
.+.+|+|+++... ..+.+||.++.+|+|||++|||+|+|++||+|+|+|+|+|+ ++|||
T Consensus 35 ~~~~~~l~~~~~~--------------------~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~-~~tsi 93 (534)
T 3abg_A 35 EIWYYEVEIKPFT--------------------HQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAE-APNSV 93 (534)
T ss_dssp CCEEEEEEEECCE--------------------ECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSS-SCBCE
T ss_pred ceEEEEEEEEEEE--------------------EEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCC-CCceE
Confidence 3578999998542 34677888899999999999999999999999999999998 89999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-CcceEEecccc----hhhhcCceeEEEEeCCCCCCCC-CCc
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHVG----LQKMDGLEGSMIIRTPKTADPH-AEL 209 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~~p~-~~~ 209 (445)
||||++++. +|||++ ||+|+||++|+|+|++.+ +||||||||.. .|+++||+|+|||+++.+.... ...
T Consensus 94 HwHGl~~~~--~~DG~~---~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~ 168 (534)
T 3abg_A 94 HLHGSFSRA--AFDGWA---EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSG 168 (534)
T ss_dssp EEETCCCCT--TTTTCS---SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCC
T ss_pred EECCCcCCC--CCCCCC---CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCcc
Confidence 999999876 799974 799999999999999985 78999999984 6889999999999988543211 111
Q ss_pred c-ccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc
Q psy16562 210 Y-DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA 288 (445)
Q Consensus 210 ~-d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~ 288 (445)
| ++ |++|+|+||+++..++.+.. .....+..++.++|||+.++ .++|++ ++|||||||++..
T Consensus 169 ~~~~---d~~l~l~d~~~~~~g~~~~~-~~~~~~~~gd~~lvNG~~~p-----------~~~v~~-~~~RlRliNa~~~- 231 (534)
T 3abg_A 169 YGEF---DIPMILTSKQYTANGNLVTT-NGELNSFWGDVIHVNGQPWP-----------FKNVEP-RKYRFRFLDAAVS- 231 (534)
T ss_dssp HHHH---SCCEEEEEECBCSSSCBCCC-TTCSSCCCCSEEEETTEESC-----------BCBCCS-SEEEEEEEECCSS-
T ss_pred CCcc---eEEEEEeeeeecCCCceecc-CCCCccccCceeccCCccCc-----------eEEecC-cEEEEEEEecCCc-
Confidence 2 33 58999999999866553322 11234456899999999764 688887 5999999999987
Q ss_pred eeEEEEecc-------cceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCc-eEEEEEEec---CC-----Cce
Q psy16562 289 CPLIFTIEK-------HQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNN-LYWMQAKTL---CD-----SIT 351 (445)
Q Consensus 289 ~~~~~~i~g-------h~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G-~y~~~~~~~---~~-----~~~ 351 (445)
+.+.|+|++ |.|+||++||+++ +|..++.+.|+|||||||+|++++.+| +||+++... |. ...
T Consensus 232 ~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~ 311 (534)
T 3abg_A 232 RSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDN 311 (534)
T ss_dssp CCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTT
T ss_pred ceEEEEEecccCcCCCccEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCC
Confidence 478999987 9999999999854 699999999999999999999998667 699987532 21 123
Q ss_pred eeEEEEEcCCCCC---CCCCCCC---------CC-C----C-CC--CCC-CCCCCCCcc----ceeEeeCCcEEEEEEEc
Q psy16562 352 AEAVLQYEGEKLT---YVSKRPK---------SD-S----F-PR--GKP-KDNSPRVPM----HFFKVQRDKRYLMRIIG 406 (445)
Q Consensus 352 ~~ail~y~~~~~~---~~~~~P~---------~~-~----~-~~--~~~-~~~~~~~~~----~~~~v~~G~~~~~rliN 406 (445)
..++++|...... ....+|. .. . + .. ... ..|+..+.. ..+.++.|++++|.|.|
T Consensus 312 ~~~il~~~~~~~~~~~~~~~~P~~L~~~~~p~~~~~~~~~~~~~~~~~~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N 391 (534)
T 3abg_A 312 TDKVMRFVVADDTTQPDTSVVPANLRDVPFPSPTTNTPRQFRFGRTGPTWTINGVAFADVQNRLLANVPVGTVERWELIN 391 (534)
T ss_dssp TSEEEEEECCCCSSCSCCCCCCCCCCCCSCCCCCCCCCEEEECSCCCSTTCCCCBTTBCTTSCCCCEECTTCEEEEEEEE
T ss_pred cceeEEEecCCCCcCCCCCCCccccccCCCCCCccccceEEEEeccCceeEECCcccCCCCCcceeeccCCCEEEEEEEc
Confidence 4588888644321 1111111 00 0 0 00 001 123333321 13678999999999999
Q ss_pred CCC-CccceEEEEeCeeEEEEec-CCc---cCCC---eEEeEEEecC
Q psy16562 407 GSC-LACPLIFTIEKHQLQVIAS-DGT---AVEP---LVVDSVTLFP 445 (445)
Q Consensus 407 ~s~-~~Hp~~~hihgh~f~Vi~~-dG~---~~~p---~~~Dtv~v~p 445 (445)
.+. +.||| |||||+|+|+++ +|. ...+ .|+|||.|.|
T Consensus 392 ~~~~~~HP~--HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~p 436 (534)
T 3abg_A 392 AGNGWTHPI--HIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGR 436 (534)
T ss_dssp CSSSCCCCE--EESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCS
T ss_pred CCCCCCcCE--EECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCC
Confidence 874 58998 999999999998 563 2222 6899999875
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-61 Score=501.80 Aligned_cols=317 Identities=20% Similarity=0.321 Sum_probs=250.6
Q ss_pred EEECCC-CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceE
Q psy16562 101 LSINRQ-LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFF 178 (445)
Q Consensus 101 ~~~Ng~-~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~w 178 (445)
|+|||+ +|||+|+|++||+|+|+|+|+|+ ++|||||||++++. +|||+|+ |+|+||++|+|+|+++ ++||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~w 101 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYL 101 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCC-CceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceE
Confidence 999999 99999999999999999999998 89999999999964 7999998 9999999999999999 799999
Q ss_pred Eecc----cchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCC--CCCCCCCCCCeEEEcc
Q psy16562 179 YHSH----VGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGN--TYNDTRIKPDAILING 252 (445)
Q Consensus 179 YH~H----~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~--~~~~~~~~~~~~lING 252 (445)
|||| ++.|+++||+|+|||+++++. ...+||. .|++|+|+||+++. .+..... .....+..++.++|||
T Consensus 102 YH~H~~~~~~~q~~~Gl~G~liV~~~~~~--~~l~~d~--~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG 176 (448)
T 3aw5_A 102 YHPHPHGLTAKQFYMGQLGLVIVEDSGSD--LGFKYGV--NDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNG 176 (448)
T ss_dssp EEECCTTTHHHHHHTTCCEEEEEECTTTT--TTCCBTT--TEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETT
T ss_pred eccCCCCchHHHHhccceEEEEEeCCccc--cCCCCCC--ceEEEEEEeeccCC-CcccccccccccccCccccEEEECC
Confidence 9999 789999999999999987543 1112443 38999999999987 5422200 0012345789999999
Q ss_pred ccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEe--cc---cceEEEccCCCcce-eeEecEEEecCCceE
Q psy16562 253 QNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI--EK---HQLQVIASDGTAVE-PLVVDSVTLFPGDRV 326 (445)
Q Consensus 253 ~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i--~g---h~~~via~DG~~v~-P~~~~~~~I~pGeR~ 326 (445)
+.. +.++|++| +|||||+|++.. +.+.|+| ++ |.|+||++||++++ |..++.+.|+|||||
T Consensus 177 ~~~-----------p~~~v~~g-~~RlRliNa~~~-~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 177 VKD-----------AVFKLSGG-SYRLRLVNGSNA-RLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp EET-----------CEEEEEEE-EEEEEEEECSSS-CCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEE
T ss_pred ccc-----------ceEEECCC-eEEEEEEcCCCc-ceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceE
Confidence 976 48999999 999999999987 5899999 99 99999999999999 999999999999999
Q ss_pred EEEEecCCCCceEEEEEEec--C-C-------------CceeeEEEEEcCCCCCC-CCCCCCCC--CCCC----------
Q psy16562 327 DVIIHTNQSNNLYWMQAKTL--C-D-------------SITAEAVLQYEGEKLTY-VSKRPKSD--SFPR---------- 377 (445)
Q Consensus 327 dv~v~~~~~~G~y~~~~~~~--~-~-------------~~~~~ail~y~~~~~~~-~~~~P~~~--~~~~---------- 377 (445)
||+|++++ +.||+++... | . .....++++|.+....+ +..++... .+..
T Consensus 244 dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~~ 321 (448)
T 3aw5_A 244 EVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALSL 321 (448)
T ss_dssp EEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEEE
T ss_pred EEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEeC
Confidence 99999984 7899998754 1 1 12345778886543211 11111100 0000
Q ss_pred -CCCC-CCCCCCc--cceeE-eeCCcEEEEEEEcCC-CCccceEEEEeCeeEEEEecCCccC------------C---Ce
Q psy16562 378 -GKPK-DNSPRVP--MHFFK-VQRDKRYLMRIIGGS-CLACPLIFTIEKHQLQVIASDGTAV------------E---PL 436 (445)
Q Consensus 378 -~~~~-~~~~~~~--~~~~~-v~~G~~~~~rliN~s-~~~Hp~~~hihgh~f~Vi~~dG~~~------------~---p~ 436 (445)
...+ .|+..+. ...+. ++.|++++|+|.|.+ .+.||| |||||+|||++++|... . |.
T Consensus 322 ~~~~~~iNg~~~~~~~p~~~~~~~g~~v~~~i~N~~~~~~HP~--HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~ 399 (448)
T 3aw5_A 322 SGMQWTINGMFWNASNPLFEHVSVEGVELWEIVNDKASMPHPM--HLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLG 399 (448)
T ss_dssp ETTEEEETTBCCCTTCTTCCCEEECEEEEEEEEECSSSCCEEE--EESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGS
T ss_pred CCceeeECCCcCCCCCCceeccCCCCeEEEEEEcCCCCCCcCE--EECCceEEEEEecCCCcccccccccccCCCccccC
Confidence 0000 2222221 11356 899999999999998 889998 99999999999998764 2 36
Q ss_pred EEeEEEecC
Q psy16562 437 VVDSVTLFP 445 (445)
Q Consensus 437 ~~Dtv~v~p 445 (445)
|||||.|.|
T Consensus 400 ~rDTv~v~p 408 (448)
T 3aw5_A 400 LKDTVLIWP 408 (448)
T ss_dssp CBSEEEECT
T ss_pred CccEEEeCC
Confidence 999999976
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-59 Score=506.43 Aligned_cols=319 Identities=16% Similarity=0.197 Sum_probs=233.6
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC---------------------------------------
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID--------------------------------------- 130 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~--------------------------------------- 130 (445)
.+.+|+..+.+|+|||++|||+|+|++||+|+|+|+|+|+.
T Consensus 45 ~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (612)
T 3gyr_A 45 RLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVAAL 124 (612)
T ss_dssp CSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHHTC
T ss_pred eecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccccC
Confidence 45667778899999999999999999999999999999962
Q ss_pred -CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-CCcceEEeccc----chhhhcCceeEEEEeCCCCCC
Q psy16562 131 -REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTAD 204 (445)
Q Consensus 131 -~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~~ 204 (445)
+.|+|||||+++.+ +|||+| ||+|+||++|+|+|++. ++||||||||. +.|+++||+|+|||+++.+..
T Consensus 125 ~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~ 199 (612)
T 3gyr_A 125 PAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDA 199 (612)
T ss_dssp CCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHT
T ss_pred CCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccc
Confidence 24789999999854 799975 99999999999999998 57999999996 789999999999999875433
Q ss_pred CCCCccccCCcceEEEEeeeeccCCCCccCC-----------------CCCCCCCCCCCeEEEccccCCCCCCCCCcccc
Q psy16562 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPG-----------------NTYNDTRIKPDAILINGQNQNPKDNSPRVPMH 267 (445)
Q Consensus 205 p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~-----------------~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~ 267 (445)
.....++ .|++|+|+||+++...+.... ......+..++.++|||+.++
T Consensus 200 ~~~p~~d---~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~p----------- 265 (612)
T 3gyr_A 200 LGLPSGD---REIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIWP----------- 265 (612)
T ss_dssp TTCCCGG---GEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEESC-----------
T ss_pred cCCCCCC---ccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCccc-----------
Confidence 2222233 379999999998754331110 001123456799999999764
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEeccc-------ceEEEccCCCcce-eeEe------cEEEecCCceEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKH-------QLQVIASDGTAVE-PLVV------DSVTLFPGDRVDVIIHTN 333 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh-------~~~via~DG~~v~-P~~~------~~~~I~pGeR~dv~v~~~ 333 (445)
.+.++. ++|||||||++.. +.+.|+|++| .|+|||+||++++ |+.+ +.+.|+|||||||+|+++
T Consensus 266 ~~~v~~-~~yRlRliNas~~-~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~ 343 (612)
T 3gyr_A 266 YADVDD-GWYRLRLVNASNA-RIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFR 343 (612)
T ss_dssp EEEEES-SEEEEEEEECCSS-CCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECT
T ss_pred eEeccC-cEEEEEEEeccCC-cceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECC
Confidence 778874 6899999999987 5899999998 4999999999985 6655 479999999999999999
Q ss_pred CCCceEEEEEEec---C-------CCceeeEEEEEcCCCC--CCCCCCCCCC---------CCC-----------CCCCC
Q psy16562 334 QSNNLYWMQAKTL---C-------DSITAEAVLQYEGEKL--TYVSKRPKSD---------SFP-----------RGKPK 381 (445)
Q Consensus 334 ~~~G~y~~~~~~~---~-------~~~~~~ail~y~~~~~--~~~~~~P~~~---------~~~-----------~~~~~ 381 (445)
+.+|.+++..... + .......++.+..... .....+|... .+. .....
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (612)
T 3gyr_A 344 ALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGS 423 (612)
T ss_dssp TCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCEEEEEEEECTTCTTT
T ss_pred CCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccccccccccccccccccc
Confidence 9777665443322 1 2233345666553221 1111111100 000 00000
Q ss_pred ------------------------------CCC---------CCC-ccceeEeeCCcEEEEEEEcCCCCccceEEEEeCe
Q psy16562 382 ------------------------------DNS---------PRV-PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKH 421 (445)
Q Consensus 382 ------------------------------~~~---------~~~-~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh 421 (445)
.+. ..+ ....+.++.|++++|.|+|.+.+.||| |||||
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~--HLHG~ 501 (612)
T 3gyr_A 424 GGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPM--HIHLA 501 (612)
T ss_dssp TTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEE--EESSC
T ss_pred cccccccccccccccccccccccceeeeccCCCccccccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCE--eECCC
Confidence 000 000 011477899999999999999999998 99999
Q ss_pred eEEEEecCCc
Q psy16562 422 QLQVIASDGT 431 (445)
Q Consensus 422 ~f~Vi~~dG~ 431 (445)
+||||+++|.
T Consensus 502 ~F~Vl~~~g~ 511 (612)
T 3gyr_A 502 DFQVLGRDAY 511 (612)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEeecCC
Confidence 9999998764
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-54 Score=425.82 Aligned_cols=266 Identities=26% Similarity=0.412 Sum_probs=222.6
Q ss_pred eEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEe
Q psy16562 57 VCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLH 136 (445)
Q Consensus 57 ~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiH 136 (445)
+++|+|+++... ....+|..+.+|+|||++|||+|+|++||+|+|+|+|.++ .+++||
T Consensus 2 ~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~siH 59 (318)
T 3g5w_A 2 KREFDLSIEDTR---------------------IVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTT-LPHTIH 59 (318)
T ss_dssp EEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBCCE
T ss_pred eEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCC-CceeEE
Confidence 688999998753 2345789999999999999999999999999999999998 899999
Q ss_pred eCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhh---hcCceeEEEEeCCCCCCCCCCccccC
Q psy16562 137 WHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK---MDGLEGSMIIRTPKTADPHAELYDFD 213 (445)
Q Consensus 137 wHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~---~~Gl~G~lIV~~~~~~~p~~~~~d~d 213 (445)
|||+++.+++++||+|++|||+|+||++++|+|+++++||||||||...+. .+||+|+|||++++.. ....++|
T Consensus 60 ~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~---~~~~~~d 136 (318)
T 3g5w_A 60 WHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPL---PIEKTVT 136 (318)
T ss_dssp EETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCC---HHHHTCC
T ss_pred ecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcc---ccccccc
Confidence 999999988899999999999999999999999999999999999986543 5899999999976422 1112344
Q ss_pred CcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEE
Q psy16562 214 LYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 293 (445)
Q Consensus 214 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~ 293 (445)
.|++|+|+||+++.... +. .....+..++.++|||+.++.. ..+++++|++|||||+|++.. .+.|
T Consensus 137 -~e~~l~l~dw~~~~~~~-~~--~~~~~~~~~d~~~ING~~~~~~--------~~l~v~~G~~vrlrliN~~~~--~h~~ 202 (318)
T 3g5w_A 137 -KDYILMLSDWVSSWANK-PG--EGGIPGDVFDYYTINAKSFPET--------QPIRVKKGDVIRLRLIGAGDH--VHAI 202 (318)
T ss_dssp -EEEEEEEEEECGGGTTC-TT--CCCCTTCCCCEEEETTBCBTSS--------CCEEECTTCEEEEEEEECSSS--CEEE
T ss_pred -ceeEEEEEeeccccccc-cc--cCCCCCCcCcEEEEcCcCCCCC--------ccEEeCCCCEEEEEEEeCCCc--eEEE
Confidence 37999999999864432 11 1112234678999999987532 358999999999999999975 4688
Q ss_pred EecccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-C-C-----CceeeEEEEEcCCC
Q psy16562 294 TIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-C-D-----SITAEAVLQYEGEK 362 (445)
Q Consensus 294 ~i~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-~-~-----~~~~~ail~y~~~~ 362 (445)
+||||.|+||+.||.++ +|..++++.|.||||++++|++++ +|.|++|||.. . . .....++|.|.+..
T Consensus 203 hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 203 HTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EECCcEEEEEecCCcccCCCccccEEEECCCCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 89999999999999998 588999999999999999999997 89999999987 2 1 13456899998865
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-52 Score=419.14 Aligned_cols=267 Identities=27% Similarity=0.457 Sum_probs=222.1
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceE
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTL 135 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsi 135 (445)
++++|+|+++... ....||.++.+|+|||++|||+|+|++||+|+|+|+|.++ .+++|
T Consensus 2 ~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~-~~~si 59 (339)
T 2zwn_A 2 AEREFDMTIEEVT---------------------IKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTS-LPHTI 59 (339)
T ss_dssp CEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESS-SCBCC
T ss_pred ceEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCC-CCccE
Confidence 4678999998743 2334799999999999999999999999999999999998 89999
Q ss_pred eeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccch--hhh-cCceeEEEEeCCCCCCCCCCcccc
Q psy16562 136 HWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGL--QKM-DGLEGSMIIRTPKTADPHAELYDF 212 (445)
Q Consensus 136 HwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~--q~~-~Gl~G~lIV~~~~~~~p~~~~~d~ 212 (445)
||||+++.+++||||+|++|||+|+||++|+|+|+++++||||||||... |.. +||+|++||+++.... .+..+
T Consensus 60 H~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~---~~~~~ 136 (339)
T 2zwn_A 60 HWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLP---IEKRV 136 (339)
T ss_dssp EEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCT---TGGGC
T ss_pred EeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCccc---ccccC
Confidence 99999999988999999999999999999999999999999999999864 777 9999999999764321 12233
Q ss_pred CCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEE
Q psy16562 213 DLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLI 292 (445)
Q Consensus 213 d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~ 292 (445)
| .|++|+|+||++..... . . ........++.++|||+.++. ...+++++|++|||||+|++.. .+.
T Consensus 137 d-~e~~l~l~d~~~~~~~~-~-~-~~g~~~~~~~~~~ING~~~~~--------~~~~~v~~G~~vrlrliN~~~~--~h~ 202 (339)
T 2zwn_A 137 T-KDVIMMMSTWESAVADK-Y-G-EGGTPMNVADYFSVNAKSFPL--------TQPLRVKKGDVVKIRFFGAGGG--IHA 202 (339)
T ss_dssp S-EEEEEEEEEECGGGTTC-T-T-CCCSTTSCCCEEEETTBCTTS--------SCCEEECTTCEEEEEEEECSSS--CEE
T ss_pred C-ceEEEEeeheecccccc-c-C-CCCCCccccceEEEccccCCC--------cccEEECCCCEEEEEEEeCCCc--eEE
Confidence 4 37999999998753321 1 0 001112357899999997653 2458999999999999999954 688
Q ss_pred EEecccceEEEccCCCcce-eeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C-----CCceeeEEEEEcCCC
Q psy16562 293 FTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C-----DSITAEAVLQYEGEK 362 (445)
Q Consensus 293 ~~i~gh~~~via~DG~~v~-P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~-----~~~~~~ail~y~~~~ 362 (445)
|+||||.|+||+.||.+++ |..++++.|.||||++++|++++ +|.|++|||.. + ......++|+|.+..
T Consensus 203 ~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 203 MHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999997 88899999999999999999988 79999999976 2 223346899998765
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-49 Score=392.47 Aligned_cols=266 Identities=18% Similarity=0.229 Sum_probs=218.3
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC-CC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-RE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~~ 132 (445)
.+++.+|+|+++... ....||.++.+|+|||++|||+|+|++||+|+|+|+|.++. .+
T Consensus 35 ~~~~~~~~l~~~~~~---------------------~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~ 93 (327)
T 1kbv_A 35 YPAKVRVKMETVEKT---------------------MKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVP 93 (327)
T ss_dssp SCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSC
T ss_pred CCCEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCc
Confidence 468889999998753 22338999999999999999999999999999999999962 58
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc---chhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV---GLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~---~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||+. .+||++..+ .|.||++++|+|++.++||||||||. +.|+.+||+|+|||++++. .| .
T Consensus 94 ~~ih~HG~~-----~~dG~~~~~--~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~-~p---~ 162 (327)
T 1kbv_A 94 HNVDFHAAT-----GQGGGAAAT--FTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG-LP---K 162 (327)
T ss_dssp BCCEETTCC-----SGGGGTTTT--CBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC-CC---C
T ss_pred eeeEeCccc-----cCCCCCcce--eecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC-CC---C
Confidence 999999985 378988654 59999999999999999999999996 6899999999999997632 12 2
Q ss_pred cccCCcceEEEEeeeeccCCCCcc---CCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCC
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKF---PGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~---~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
+ | .|++|+++||++....... ........+..++.++|||+.++.. ..+.+++++|++|||||+|++.
T Consensus 163 ~--d-~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~------~~~~l~v~~G~~vRlRliN~~~ 233 (327)
T 1kbv_A 163 V--D-KEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGALT------GDNALKAKAGETVRMYVGNGGP 233 (327)
T ss_dssp C--S-EEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTTS------GGGCEEEETTEEEEEEEEEEES
T ss_pred C--c-eEEEEEeeeeeccCccccccccccChhHhccCCCceEEEcCcccCCC------CceeEEeCCCCEEEEEEECCCC
Confidence 3 3 3799999999987532100 0000011124678999999987532 1257999999999999999997
Q ss_pred CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-C-CCceeeEEEEEcCCC
Q psy16562 287 LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-C-DSITAEAVLQYEGEK 362 (445)
Q Consensus 287 ~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-~-~~~~~~ail~y~~~~ 362 (445)
. +.+.|+|+||.|+||+.||.+++|..++++.|+||||+|++|++++ +|.||+++|.. . ......++|+|.+..
T Consensus 234 ~-~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~-pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 234 N-LVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp S-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred C-CceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCC-CeEEEEEeccccccccCCcEEEEEECCCC
Confidence 5 4789999999999999999999999999999999999999999997 79999999987 2 344568999998764
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-48 Score=378.81 Aligned_cols=239 Identities=20% Similarity=0.253 Sum_probs=202.7
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
..+++|+++++... ....+|..+.+|+|||++|||+|+|++||+|+|+|+|.|+ ++++
T Consensus 32 ~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~-~~~~ 89 (288)
T 3gdc_A 32 RTLREWDIVAVDKD---------------------FEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGA-HPHT 89 (288)
T ss_dssp CEEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSS-SCBC
T ss_pred CcEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCC-Cccc
Confidence 55788999998643 2234599999999999999999999999999999999998 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc---hhhhcCceeEEEEeCCCCCCCCCCccc
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG---LQKMDGLEGSMIIRTPKTADPHAELYD 211 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d 211 (445)
|||||++. .++||+|+++||+|+||++++|+|+++++||||||||.. .|+.+||+|+|||+++... .+
T Consensus 90 iH~HG~~~---~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~------~~ 160 (288)
T 3gdc_A 90 IHFHGVHR---ATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR------PP 160 (288)
T ss_dssp CEESSCCC---GGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC------CC
T ss_pred EEeccccc---cccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC------CC
Confidence 99999973 489999999999999999999999999999999999986 7999999999999987432 12
Q ss_pred cCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 212 FDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 212 ~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
.| .|++|+++||+.++ +..++.++|||+.+.+ ..+.++++.|++||||++|++.....+
T Consensus 161 ~d-~e~~l~~~d~~~~~-------------g~~~~~~~iNG~~~~~-------~~~~l~v~~Ge~vr~~l~N~g~~~~~H 219 (288)
T 3gdc_A 161 AD-DEMVMVMNGYNTDG-------------GDDNEFYSVNGLPFHF-------MDFPVKVKQHELVRIHLINVLEYDPIN 219 (288)
T ss_dssp CS-EEEEEEEEEECCSS-------------TTCCSEEEETTSTTHH-------HHSCEEEETTCCEEEEEEECCCSSSEE
T ss_pred Cc-ceEEEEEeeEecCC-------------CCCcceEEECcccccc-------cCcccccCCCCEEEEEEEeCCCCCcce
Confidence 22 38999999998652 2246789999997631 123689999999999999998532257
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.|+||||.|.|++.++...+|...+++.|.|||++++++++++ +|.|.+|||..
T Consensus 220 ~fHlhG~~f~v~~~g~~~~~~~~~Dtv~v~pg~~~~v~~~~~~-pG~~~~hCH~~ 273 (288)
T 3gdc_A 220 SFHIHGNFFHYYPTGTMLTPSEYTDTISQVQGQRGILELRFPY-PGKFMFHAHKT 273 (288)
T ss_dssp EEEETTCCEEEEETTCCSSCSEEESEEEEETTCEEEEEECCCS-CEEEEEECSSH
T ss_pred eEEEcCCEEEEEcCCCccCCCceeeEEEeCCCceEEEEEECCC-CEEEEEEecCh
Confidence 8899999999998544333478899999999999999999987 89999999987
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=370.63 Aligned_cols=273 Identities=17% Similarity=0.174 Sum_probs=213.8
Q ss_pred CCCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 52 NAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 52 ~~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
.+.+++++|+|+++... ....+|.++.+|+|||++|||+|+|++||+|+|+|+|.
T Consensus 27 ~~~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---- 81 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKE---------------------VQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---- 81 (333)
T ss_dssp SSSCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----
T ss_pred CCCCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC----
Confidence 44688999999998753 22347999999999999999999999999999999998
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc-----hhhhcCceeEEEEeCCCCC-CC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG-----LQKMDGLEGSMIIRTPKTA-DP 205 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~-----~q~~~Gl~G~lIV~~~~~~-~p 205 (445)
.+++||||+++.+...+||.+.++| |+||++++|+|++.++||||||||.. .|+.+||+|+|||++++.. .+
T Consensus 82 ~~~~h~Hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~ 159 (333)
T 1mzy_A 82 PENTMPHNIDFHAATGALGGGGLTL--INPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDH 159 (333)
T ss_dssp TTCCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCT
T ss_pred CCCcccccceecCCCCCCCCCceeE--eCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCcccc
Confidence 4789999999876555666677774 99999999999999999999999985 7999999999999976432 12
Q ss_pred CCCccccCCcceEEEEeeeeccC--CCCc--cCCC-------CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecC
Q psy16562 206 HAELYDFDLYSHVIIVTDWMHSM--TDSK--FPGN-------TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRD 274 (445)
Q Consensus 206 ~~~~~d~d~~e~~l~l~D~~~~~--~~~~--~~~~-------~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G 274 (445)
...++++| .|++|+++||++.. .... +... .....+..++.++|||+..... ..+.++|++|
T Consensus 160 ~~~p~~~d-~e~~l~l~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~------~~~~l~v~~G 232 (333)
T 1mzy_A 160 EGKPVRYD-TVYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALT------GEGALKAKVG 232 (333)
T ss_dssp TSCBCCCS-EEEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTS------GGGCEEEETT
T ss_pred ccCCCccc-hheeeeeeeeccCccccccccccccccccccchhHHhhccCCcEEEECCcccccC------CCcceEecCC
Confidence 22345555 37999999999842 2221 1100 0001235789999999975321 1357999999
Q ss_pred cEEEEEEEccCCCceeEEEEecccceEEEccCCCcce-ee-EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCc
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PL-VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSI 350 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~ 350 (445)
++||||++|++... .+++ +++|.++|++ ||.+++ |. .++++.|.||||+|++|++++ +|+||+|||.. +...
T Consensus 233 er~Rl~n~~~~~~~-~~h~-i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~-pG~y~~~ch~~~h~~~~ 308 (333)
T 1mzy_A 233 DNVLFVHSQPNRDS-RPHL-IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHK 308 (333)
T ss_dssp CEEEEEEEESSSCB-CEEE-ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTT
T ss_pred CEEEEEECCCCCcc-ccEE-ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC-CEEEEEecChhhhHhhC
Confidence 99999888776542 3443 8999999999 999997 44 589999999999999999998 79999999987 2255
Q ss_pred eeeEEEEEcCCC
Q psy16562 351 TAEAVLQYEGEK 362 (445)
Q Consensus 351 ~~~ail~y~~~~ 362 (445)
...++++|.+..
T Consensus 309 Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 309 GATAHVLVEGEW 320 (333)
T ss_dssp CCEEEEEEESCC
T ss_pred CCEEEEEEcCCC
Confidence 667889998743
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=365.26 Aligned_cols=230 Identities=21% Similarity=0.275 Sum_probs=191.7
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDRE 132 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ 132 (445)
...++++|+|+++... .+......+++||++|||+|||++||+|+|+|+|+|+ ++
T Consensus 3 ~~g~~~~~~l~~~~~~------------------------~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~-~~ 57 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA------------------------DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-VR 57 (276)
T ss_dssp -CCCEEEEEEEEEECT------------------------TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SC
T ss_pred CcceEEEEEEEEEeCC------------------------CCceecceeccCCcccCCeEEEECCCEEEEEEEECCC-CC
Confidence 3567899999998631 2334456678999999999999999999999999998 89
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-------------CcceEEeccc------chhhhcCcee
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-------------SGTFFYHSHV------GLQKMDGLEG 193 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-------------~GT~wYH~H~------~~q~~~Gl~G 193 (445)
+||||||+++.. ++||++ +|||+|+||++|+|+|++.+ +||||||||. ..|+.+||+|
T Consensus 58 ~siH~HG~~~~~--~~DG~~-~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G 134 (276)
T 3kw8_A 58 ASLHVHGLDYEI--SSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYG 134 (276)
T ss_dssp BCCEESSSBCCG--GGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEE
T ss_pred ccEeecCcccCC--ccCCCc-CCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEE
Confidence 999999999976 799999 89999999999999999964 7999999998 3689999999
Q ss_pred EEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEec
Q psy16562 194 SMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQR 273 (445)
Q Consensus 194 ~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~ 273 (445)
+|||+++.... . | .|++|+++|| +|||+.+. +.+.|+++.
T Consensus 135 ~liV~~~~~~~-----~--d-rE~~l~l~~~------------------------~iNG~~~~--------~~p~i~v~~ 174 (276)
T 3kw8_A 135 PVIVRRKGDVL-----P--D-ATHTIVFNDM------------------------TINNRKPH--------TGPDFEATV 174 (276)
T ss_dssp EEEEECTTCCC-----C--S-EEEEEEEETT------------------------EETTCCTT--------CCCCEEEET
T ss_pred EEEEecCCCcc-----c--c-cceEEEeccc------------------------ccceeccc--------CCCCEEEec
Confidence 99999875432 1 3 3788888764 78998653 357899999
Q ss_pred CcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc----eeeEecEEEecCCceEEEEEecCC--CCceEEEEEEec-
Q psy16562 274 DKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL- 346 (445)
Q Consensus 274 G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~- 346 (445)
|++|||||+|.+.. .+.|+||||.|.+++ ||... .+..++++.|.||+++++++.+++ .+|.|++|||..
T Consensus 175 G~~vri~l~N~~~~--~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~ 251 (276)
T 3kw8_A 175 GDRVEIVMITHGEY--YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQS 251 (276)
T ss_dssp TCEEEEEEEEESSC--CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHH
T ss_pred CCEEEEEEecCCCc--ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCch
Confidence 99999999999975 578889999999875 66432 245789999999999999999985 589999999987
Q ss_pred --CCCceee
Q psy16562 347 --CDSITAE 353 (445)
Q Consensus 347 --~~~~~~~ 353 (445)
..++.+.
T Consensus 252 H~~~GM~g~ 260 (276)
T 3kw8_A 252 HSDMGMVGL 260 (276)
T ss_dssp HHHTTCEEE
T ss_pred HhhCCCeEE
Confidence 3444444
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=366.47 Aligned_cols=271 Identities=18% Similarity=0.228 Sum_probs=211.0
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
.+++++|+|++.... ..+.+||.++.+|+|||++|||+|+|++||+|+|+|+|.+.
T Consensus 29 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---- 84 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKK--------------------MVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---- 84 (336)
T ss_dssp CCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT----
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC----
Confidence 578899999998753 23457899999999999999999999999999999999974
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc----chhhhcCceeEEEEeCCCCC-CCCCC
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV----GLQKMDGLEGSMIIRTPKTA-DPHAE 208 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~~-~p~~~ 208 (445)
++||||+++.+.+++||.+.++| |+||++|+|+|+++++||||||||. +.|+.+||+|+|||++++.. ++...
T Consensus 85 ~~~~h~~~~h~~~~~~~~~~~~~--i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~ 162 (336)
T 1oe1_A 85 NAMPHNVDFHGATGALGGAKLTN--VNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGK 162 (336)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSC
T ss_pred CCccccceECCCCCCCCCcceEE--eCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccC
Confidence 46788888777667788777775 9999999999999999999999997 47999999999999976432 22333
Q ss_pred ccccCCcceEEEEeeeeccCCCC-ccCCCCCC----------CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEE
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDS-KFPGNTYN----------DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRY 277 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~-~~~~~~~~----------~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~ 277 (445)
+.++|. |++|+++||++..+.. .+...... ..+..++.++|||+.++.+ ..+.++|++|++|
T Consensus 163 ~~~~D~-e~~l~~~D~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~------~~~~l~v~~Gerv 235 (336)
T 1oe1_A 163 PLHYDR-AYTIGEFDLYIPKGPDGKYKDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT------GANALTAKVGETV 235 (336)
T ss_dssp BCCCSE-EEEEEEEEECCCBCTTSSBCCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCEE
T ss_pred cccCCc-eeEeeeeeeeeccccCCceeecccccccccchhhHhhcCCCCEEEECCeeccCC------CCcceEcCCCCEE
Confidence 445553 7999999999853211 11100000 1135789999999976421 1368999999988
Q ss_pred EEEEEccCCCceeEE-EEecccceEEEccCCCcceee--EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCcee
Q psy16562 278 LMRIIGGSCLACPLI-FTIEKHQLQVIASDGTAVEPL--VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITA 352 (445)
Q Consensus 278 rlRliN~~~~~~~~~-~~i~gh~~~via~DG~~v~P~--~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~ 352 (445)
||+..+++.. +. ..|++|.++|++ ||.+++|. .++++.|.||||+|++|++++ +|+||+++|.. +.....
T Consensus 236 Rlin~~~~~~---~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~-pG~y~~~~h~~~~~~~~G~ 310 (336)
T 1oe1_A 236 LLIHSQANRD---TRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGA 310 (336)
T ss_dssp EEEEEESSSC---BCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSC
T ss_pred EEEecCCCCc---cceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC-CceEEEEechhhccccCCC
Confidence 7755544433 23 447999999998 99999853 468999999999999999998 79999999986 324556
Q ss_pred eEEEEEcCCC
Q psy16562 353 EAVLQYEGEK 362 (445)
Q Consensus 353 ~ail~y~~~~ 362 (445)
.++++|.+..
T Consensus 311 ~~~~~V~~~~ 320 (336)
T 1oe1_A 311 AGHIKVEGKW 320 (336)
T ss_dssp EEEEEEESCC
T ss_pred eEEEEECCCC
Confidence 7889998654
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=383.94 Aligned_cols=267 Identities=16% Similarity=0.207 Sum_probs=219.8
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC-CC
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID-RE 132 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~-~~ 132 (445)
.+.+.+|+|+++... ...+||..+.+|+|||++|||+|+|++||+|+|+|.|.|+. .+
T Consensus 25 ~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~ 83 (442)
T 2zoo_A 25 HSAKVVINLETREQV---------------------GRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMP 83 (442)
T ss_dssp SCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSC
T ss_pred CCcEEEEEEEEEEEE---------------------EEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCC
Confidence 467889999998753 22358999999999999999999999999999999999863 59
Q ss_pred ceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc---cchhhhcCceeEEEEeCCCCCCCCCCc
Q psy16562 133 VTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH---VGLQKMDGLEGSMIIRTPKTADPHAEL 209 (445)
Q Consensus 133 tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H---~~~q~~~Gl~G~lIV~~~~~~~p~~~~ 209 (445)
++|||||+.+ +||++..+ +|+||++++|+|++.++|||||||| .+.|+.+||+|+|||++++.. | .
T Consensus 84 ~~iH~HG~~~-----~dG~~~~~--~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~-~---~ 152 (442)
T 2zoo_A 84 HNIDLHAVTG-----PGGGAESS--FTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL-A---P 152 (442)
T ss_dssp BCCEETTCCS-----GGGGGGGC--CBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC-C---C
T ss_pred CCEEecCCcC-----CCCCCccE--EECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC-C---C
Confidence 9999999873 78988755 6999999999999999999999997 469999999999999965321 1 2
Q ss_pred cccCCcceEEEEeeeeccCCCCccC---CCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCC
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFP---GNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~---~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
+| .|++|+++||++........ .......+..++.++|||+.++.. ..+.|++++|++|||||+|++.
T Consensus 153 ~d---~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~------~~~~l~v~~G~~vrlrliN~~~ 223 (442)
T 2zoo_A 153 VD---REYYLVQGDFYTKGEFGEAGLQPFDMAKAIDEDADYVVFNGSVGSTT------DENSLTAKVGETVRLYIGNGGP 223 (442)
T ss_dssp CS---EEEEEEEEEECBSSCTTCCEEECBCHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCEEEEEEEEEES
T ss_pred CC---ceEEEEeeeeeccCcccccccccCChhHhccCCCCEEEECCCcCCCC------CCCceEeCCCCEEEEEEEeCCC
Confidence 33 37999999999875421100 000011235679999999976421 1258999999999999999987
Q ss_pred CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC--CCceeeEEEEEcCCCC
Q psy16562 287 LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC--DSITAEAVLQYEGEKL 363 (445)
Q Consensus 287 ~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~--~~~~~~ail~y~~~~~ 363 (445)
. ..+.|+|+||.|+||+.||.+++|..++++.|.||||+|++|++++ +|+||+++|..+ ......++|+|.+...
T Consensus 224 ~-~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~-~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 224 N-LVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEV-PGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp S-CCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCS-CEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred C-CceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCC-CCeEEEEecccccccccCceEEEEecCCCC
Confidence 5 4689999999999999999999999999999999999999999997 799999998873 3556789999987654
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=416.46 Aligned_cols=352 Identities=15% Similarity=0.164 Sum_probs=238.5
Q ss_pred CCCceEEEEEEEEEeeecCccccc--cC--CCcccc----cccceeecCCCeEEEEE-------EECCC--------CCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACAD--CL--KGNQKA----CRRKGCVTADGFERAIL-------SINRQ--------LPG 109 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~--~~--~~~~~~----~~~~~~~~~dG~~~~~~-------~~Ng~--------~PG 109 (445)
...++++|.+-+++.. |..... +. ....+. .....-....|..+..+ +||+. +||
T Consensus 17 ~~~~~r~y~i~~~~~~--w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PG 94 (1065)
T 2j5w_A 17 AWAKEKHYYIGIIETT--WDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLG 94 (1065)
T ss_dssp ---CEEEEEEEEEEEE--EESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSC
T ss_pred cccceeEEEEEEEEEE--eecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcC
Confidence 3467999999988653 211100 00 000000 01111222345555555 56766 999
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccC----CCCCCCCCCc--ccccCCCCCCceEEEEecCC----------
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQK----VTPWMDGVPM--VTQCPIPSSTTFRYKFPAMP---------- 173 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~----~~~~~DGvp~--~tq~pI~pG~~~~Y~f~~~~---------- 173 (445)
|+|||++||+|+|+|+|+|+ +++||||||++++ +.+|+||+++ +|||+|+||++|+|+|++.+
T Consensus 95 P~Ir~~~GD~v~v~v~N~l~-~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~ 173 (1065)
T 2j5w_A 95 PIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGN 173 (1065)
T ss_dssp CCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCS
T ss_pred CeEEEeCCeEEEEEEEECCC-CCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCC
Confidence 99999999999999999999 8999999999987 5578899998 89999999999999999986
Q ss_pred CcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccCCCCccCCCC--CCCCC-
Q psy16562 174 SGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSMTDSKFPGNT--YNDTR- 242 (445)
Q Consensus 174 ~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~~~~~~~~~~--~~~~~- 242 (445)
+||||||||++. |+++||+|+|||++++... ...++++|. |++|+|+| |++......+.... ....+
T Consensus 174 aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~-~p~~~~~d~-e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~ 251 (1065)
T 2j5w_A 174 CVTRIYHSHIDAPKDIASGLIGPLIICKKDSLD-KEKEKHIDR-EFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNE 251 (1065)
T ss_dssp EEEEEEECCSSHHHHHHHTCEEEEEEECTTCBS-SSSBTTCCE-EEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCH
T ss_pred ceEEEEEeccCchhHhhCccEEEEEEecCcccC-CCccCCCcc-ceEEEeeeecCCccccccchhhhhhcCccccccccc
Confidence 399999999875 4689999999999875432 112345553 89999994 55432111111000 00000
Q ss_pred ---CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEE
Q psy16562 243 ---IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ---~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~ 319 (445)
..+..++|||+.+.+ .+.++|++|++|||||+|++.....+.|+||||.|++ +|..++++.
T Consensus 252 ~~~~~~~~~~iNG~~~~~--------~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~ 315 (1065)
T 2j5w_A 252 DFQQSNRMYSVNGYTFGS--------LSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTIN 315 (1065)
T ss_dssp HHHHHTEEEEETTEETTC--------CCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEE
T ss_pred cccccCcEEEECCccCCC--------CcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEE
Confidence 124579999997531 3578999999999999999965346899999999993 367899999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec-CCCceeeEEEEEcCCCCCCCCCCCCC--------------------------
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL-CDSITAEAVLQYEGEKLTYVSKRPKS-------------------------- 372 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~-~~~~~~~ail~y~~~~~~~~~~~P~~-------------------------- 372 (445)
|+||||+||+|++++ +|.|+||||.. .......+.+++.+....+..+.|.-
T Consensus 316 I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~~Gm~~~~~V~~~~~~~~~~~~~g~~~~~~~i~A~e~~wdy~~~~~~~~~ 394 (1065)
T 2j5w_A 316 LFPATLFDAYMVAQN-PGEWMLSCQNLNHLKAGLQAFFQVQECNKSSSKDNIRGKHVRHYYIAAEEIIWNYAPSGIDIFT 394 (1065)
T ss_dssp ECBTCEEEEEEECCS-CEEEEEEECSHHHHHTTCEEEEEEECSCCCCCCCCCTTSEEEEEEEEEEEEEEESCTTSBCTTT
T ss_pred ECCCcEEEEEEEeCC-CeeEEEEecCcchhhCCCEEEEEEecCCCccccccccccceeEEEEeceecccccCCCCccccc
Confidence 999999999999998 79999999977 21122344555554322110000100
Q ss_pred ------C-C-----CCCCCC------------------C-CCCCCCc--------cceeEeeCCcEEEEEEEcCCCCccc
Q psy16562 373 ------D-S-----FPRGKP------------------K-DNSPRVP--------MHFFKVQRDKRYLMRIIGGSCLACP 413 (445)
Q Consensus 373 ------~-~-----~~~~~~------------------~-~~~~~~~--------~~~~~v~~G~~~~~rliN~s~~~Hp 413 (445)
. . +.+... + .+..+.+ -+.+.++.|+++++.|.|.+...|+
T Consensus 395 ~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~~~y~d~~f~~~~~~~~~~~~~g~lgpvi~a~~gd~i~i~f~N~~~~~~s 474 (1065)
T 2j5w_A 395 KENLTAPGSDSAVFFEQGTTRIGGSYKKLVYREYTDASFTNRKERGPEEEHLGILGPVIWAEVGDTIRVTFHNKGAYPLS 474 (1065)
T ss_dssp CCBTTCTTCTTHHHHCCBTTBCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSSCBC
T ss_pred ccccCCCcccchhhhccCCcccCceEeeeeeecccCCceEEcCcCCcccccccccCceEEEeCCCEEEEEEEECCCCCcc
Confidence 0 0 000000 0 0011111 1268999999999999999887777
Q ss_pred eEEEEeCeeEEEEec
Q psy16562 414 LIFTIEKHQLQVIAS 428 (445)
Q Consensus 414 ~~~hihgh~f~Vi~~ 428 (445)
+ |+||+.|.|.+.
T Consensus 475 ~--h~hG~~f~~~~~ 487 (1065)
T 2j5w_A 475 I--EPIGVRFNKNNE 487 (1065)
T ss_dssp C--EEESSBCCGGGC
T ss_pred C--cccceeeeccCC
Confidence 6 999999998875
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=360.94 Aligned_cols=270 Identities=18% Similarity=0.205 Sum_probs=208.5
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
.+++.+|+|++.... ..+.+||..+.+|+|||++|||+|+|++||+|+|+|+|.+ +
T Consensus 35 ~~~~~~~~l~~~~~~--------------------~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~----~ 90 (340)
T 2bw4_A 35 GPRVVEFTMTIEEKK--------------------LVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD----T 90 (340)
T ss_dssp SCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT----T
T ss_pred CCcEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC----C
Confidence 478899999998753 2344679999999999999999999999999999999997 6
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccc----hhhhcCceeEEEEeCCCCC-CCCCC
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG----LQKMDGLEGSMIIRTPKTA-DPHAE 208 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~----~q~~~Gl~G~lIV~~~~~~-~p~~~ 208 (445)
++||||+++.+....||.+.++| |.||++++|+|+++++||||||||.. .|+.+||+|+|||++++.. +....
T Consensus 91 ~~~~hg~~~~~~~~~~~~~~~~~--i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~ 168 (340)
T 2bw4_A 91 NTLLHNIDFHAATGALGGGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQ 168 (340)
T ss_dssp CCSCBCCEETTSCSGGGGGGGCC--BCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSC
T ss_pred CCccCcceeCCcCCCCCCccceE--eCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCC
Confidence 79999999876544555555664 99999999999999999999999974 7999999999999986431 11122
Q ss_pred ccccCCcceEEEEeeeecc--CCCCccCCCCCC-----------CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCc
Q psy16562 209 LYDFDLYSHVIIVTDWMHS--MTDSKFPGNTYN-----------DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDK 275 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~--~~~~~~~~~~~~-----------~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~ 275 (445)
+.++| .|++|+++||++. ..+. +.. +.. ..+..++.++|||+.+... ..+.++|++|+
T Consensus 169 p~~~d-~e~~l~l~D~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~------~~~~l~v~~G~ 239 (340)
T 2bw4_A 169 PLTYD-KIYYVGEQDFYVPKDEAGN-YKK-YETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT------GDHALTAAVGE 239 (340)
T ss_dssp EECCS-EEEEEEEEEECCCBCTTSC-BCC-CCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTC
T ss_pred CcCcc-eeEEEeeeeeeeccccCCc-ccc-cccccccccchhhHhhcCCCCEEEECCccCCcc------CCCceEcCCCC
Confidence 34455 3789999999984 2222 110 000 0135678999999976321 13689999999
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce-ee-EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCce
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PL-VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSIT 351 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~ 351 (445)
++||++.|.+... .+. .+++|.++|++ ||.++. |. .++++.|.||||+|++|++++ +|.||+|||.. .....
T Consensus 240 r~Rl~n~~~~~~~-~~~-~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~-pG~y~~~~h~~~~h~~~G 315 (340)
T 2bw4_A 240 RVLVVHSQANRDT-RPH-LIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELG 315 (340)
T ss_dssp EEEEEEEESSSCB-CEE-EETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTS
T ss_pred EEEEEECCCCCcc-ceE-EecCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC-CeeeEEEcCchHHHHhCC
Confidence 9988877766443 222 38999999997 998886 43 589999999999999999998 79999999986 22344
Q ss_pred eeEEEEEcCCC
Q psy16562 352 AEAVLQYEGEK 362 (445)
Q Consensus 352 ~~ail~y~~~~ 362 (445)
..++++|.+..
T Consensus 316 m~~~~~V~~~~ 326 (340)
T 2bw4_A 316 AAGHFKVTGEW 326 (340)
T ss_dssp CEEEEEEESCC
T ss_pred CEEEEEECCCC
Confidence 56788888754
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=357.36 Aligned_cols=205 Identities=21% Similarity=0.311 Sum_probs=174.4
Q ss_pred eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC---
Q psy16562 96 FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM--- 172 (445)
Q Consensus 96 ~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~--- 172 (445)
..+.++..||++|||+|||++||+|+|+|+|+|+ +++||||||+++.. .+||++ .+||+|+||++|+|+|++.
T Consensus 28 ~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~--~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~ 103 (313)
T 3tas_A 28 MGYGLEKGKATIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI--SSDGTK-QSRSDVEPGGTRTYTWRTHVPG 103 (313)
T ss_dssp EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG--GGSCST-TTTCCBCTTCEEEEEEBCCCCE
T ss_pred eeeeeecCCccccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc--cCCCCc-cccCCcCCCCEEEEEEEeccCC
Confidence 3566777899999999999999999999999998 89999999999865 799998 5999999999999999874
Q ss_pred ----------CCcceEEecccc------hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCC
Q psy16562 173 ----------PSGTFFYHSHVG------LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGN 236 (445)
Q Consensus 173 ----------~~GT~wYH~H~~------~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~ 236 (445)
++||||||||.. .|+.+||+|+|||+++... .+ | .|++|+++||+
T Consensus 104 ~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~--d-~e~~l~~~d~t----------- 164 (313)
T 3tas_A 104 RRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LP--D-RTHTIVFNDMT----------- 164 (313)
T ss_dssp ECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CC--S-EEEEEEEETTE-----------
T ss_pred ccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cc--c-ccceeeccchh-----------
Confidence 579999999963 4578999999999987432 12 3 37999999985
Q ss_pred CCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---ee
Q psy16562 237 TYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PL 313 (445)
Q Consensus 237 ~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~ 313 (445)
+||+..+. .+.+.++.|++|||||+|++.. .+.|+||||.|.+++.||.... |.
T Consensus 165 -------------~Ng~~~~~--------~~~l~v~~Ge~vr~~liN~g~~--~hpfHlHGh~F~v~~~~~~~~~~~~~~ 221 (313)
T 3tas_A 165 -------------INNRPAHT--------GPDFEATVGDRVEFVMITHGEY--YHTFHLHGHRWADNRTGMLTGPDDPSQ 221 (313)
T ss_dssp -------------ETTCCTTC--------CCCEEEETTCEEEEEEEEESSC--CEEEEETTCCEESSTTSSCCSTTCCCC
T ss_pred -------------cccCCccc--------ccccccccCCEEEEEEeccccc--ceeeeecCCeeEEEEECCccCCCCCCe
Confidence 34444322 2568999999999999999965 4678899999999999887653 67
Q ss_pred EecEEEecCCceEEEEEecCC--CCceEEEEEEec
Q psy16562 314 VVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL 346 (445)
Q Consensus 314 ~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~ 346 (445)
.++++.|.||||++++|.+.+ .||.|.+|||..
T Consensus 222 ~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~ 256 (313)
T 3tas_A 222 VIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQ 256 (313)
T ss_dssp EESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred eeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCCh
Confidence 889999999999999998764 489999999987
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=354.81 Aligned_cols=221 Identities=20% Similarity=0.308 Sum_probs=183.8
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCC-eEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCc
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADG-FERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREV 133 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~t 133 (445)
..+++|++..|... +| ..+.++++||++|||+|||++||+|+|+|+|+|+ +++
T Consensus 27 ~~~~~~~~~a~~~~-------------------------~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~-~~~ 80 (299)
T 3t9w_A 27 GTTRRITMYAEKIS-------------------------DELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTD-RVL 80 (299)
T ss_dssp CCEEEEEEEEEEEE-------------------------TTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-SCB
T ss_pred CCEEEEEEEEEecC-------------------------CCceeeeecCCCCCccCceEEEECCeEEEEEEEECCC-CCc
Confidence 55788888888532 22 3456667799999999999999999999999998 899
Q ss_pred eEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC-------------CCcceEEecccc------hhhhcCceeE
Q psy16562 134 TLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM-------------PSGTFFYHSHVG------LQKMDGLEGS 194 (445)
Q Consensus 134 siHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~-------------~~GT~wYH~H~~------~q~~~Gl~G~ 194 (445)
||||||+++.. +|||++ ++||+|+||++|+|+|+++ ++||||||||.. .|+++||+|+
T Consensus 81 siH~HG~~~~~--~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~ 157 (299)
T 3t9w_A 81 SLHPHGVDYDV--NSDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGA 157 (299)
T ss_dssp CCEESSSBCCG--GGSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEE
T ss_pred cEEeCCcccCC--ccCCCc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccce
Confidence 99999999864 799997 7999999999999999986 579999999963 4788999999
Q ss_pred EEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecC
Q psy16562 195 MIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRD 274 (445)
Q Consensus 195 lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G 274 (445)
|||+++.... + | .|++|++++|. +||+..++ .+.++++.|
T Consensus 158 liV~~~~~~~-----~--d-~e~~l~~~~~~------------------------~Ng~~~~~--------~p~l~v~~G 197 (299)
T 3t9w_A 158 LVVRRQGDLL-----P--K-RQFTVVFNDMM------------------------INNRAHHD--------APTFEANLG 197 (299)
T ss_dssp EEEECTTCCC-----C--S-EEEEEEEETTE------------------------ETTCCTTC--------CCEEEEETT
T ss_pred EEEecccccC-----c--c-ccceeeeeeee------------------------ecCccccc--------cccceecCC
Confidence 9999874322 2 3 37999988764 56665433 257999999
Q ss_pred cEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---eeEecEEEecCCceEEEEEecCC--CCceEEEEEEec
Q psy16562 275 KRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFPGDRVDVIIHTNQ--SNNLYWMQAKTL 346 (445)
Q Consensus 275 ~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~~~~~I~pGeR~dv~v~~~~--~~G~y~~~~~~~ 346 (445)
++|||||+|++... +.|+||||.|.++..|+.... +..++++.|.||||++++|.+.+ .||.|++|||..
T Consensus 198 e~Vr~~liN~~~~~--HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~ 272 (299)
T 3t9w_A 198 ERVEWIAIGHGSNF--HTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQ 272 (299)
T ss_dssp CEEEEEEEEESSCC--CEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred CEEEEEEEeccccc--eeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCH
Confidence 99999999999764 678899999999988877653 34689999999999999987654 389999999987
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=358.23 Aligned_cols=219 Identities=17% Similarity=0.217 Sum_probs=162.8
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCccc----CCCCCCCCCCccc--ccCCCCCCceEEEEec
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQ----KVTPWMDGVPMVT--QCPIPSSTTFRYKFPA 171 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~----~~~~~~DGvp~~t--q~pI~pG~~~~Y~f~~ 171 (445)
++.+++| ++|||+|+|++||+|+|+|+|.|+ ++++|||||++. .+.+++||++.++ ||+|+||++|+|+|++
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCC-CcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 3456789 699999999999999999999998 899999999994 4445555555554 7999999999999999
Q ss_pred CC----------CcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCC
Q psy16562 172 MP----------SGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYN 239 (445)
Q Consensus 172 ~~----------~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~ 239 (445)
++ +||||||||.+. |+.+||+|+|||+++...+....+.+.| .|++|+++||... .. +.
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d-~e~~l~~~d~d~~--~~-~~----- 197 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFE-KQHVLMFAVFDES--KS-WN----- 197 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSC-CCCCCBCCEEETT--SS-SS-----
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCccc-ceEEEEEEecccc--cc-cc-----
Confidence 64 389999999865 8899999999999875433333334454 3799999998532 11 11
Q ss_pred CCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEE
Q psy16562 240 DTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 319 (445)
Q Consensus 240 ~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~ 319 (445)
...++.++|||+.+.+ .|.|++++|++|||||+|++.....+.|++|||.|.+ || ..++++.
T Consensus 198 --~~~~~~~~ING~~~~~--------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 198 --QTSSLMYTVNGYVNGT--------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --CCCCEEECSSSCCSSC--------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --cCCCcceeeCCEecCC--------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 1346789999997632 3578999999999999999975334568899999986 88 3479999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
|.||||++++|++++ +|.|++|||..
T Consensus 260 l~pger~~v~~~~~~-pG~~~~hch~~ 285 (306)
T 1sdd_A 260 LVSATSTTANMTVSP-EGRWTIASLIP 285 (306)
T ss_dssp EETTCCBC---------CCCCCBCCST
T ss_pred ECCCcEEEEEEEcCC-CeEEEEEeCCh
Confidence 999999999999987 79999999976
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=375.87 Aligned_cols=224 Identities=17% Similarity=0.237 Sum_probs=168.7
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCccc--------ccCCCCCCceEEEEecCC--
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVT--------QCPIPSSTTFRYKFPAMP-- 173 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~t--------q~pI~pG~~~~Y~f~~~~-- 173 (445)
|+++|||+|+|++||+|+|+|+|.|+ ++++|||||+++.. +|||+|+++ ||+|+||++|+|+|++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~ 139 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRS 139 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTT
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCccc
Confidence 56899999999999999999999998 89999999999964 799999887 999999999999999985
Q ss_pred ----Cc----ceEEeccc--chhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEe------eeeccCCCCccCCCC
Q psy16562 174 ----SG----TFFYHSHV--GLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVT------DWMHSMTDSKFPGNT 237 (445)
Q Consensus 174 ----~G----T~wYH~H~--~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~------D~~~~~~~~~~~~~~ 237 (445)
+| |||||||. ..|+.+||+|+|||+++........ .+.+..|++|+|+ ||+++..........
T Consensus 140 gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~-~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~ 218 (647)
T 1sdd_B 140 GPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETN-MPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA 218 (647)
T ss_dssp SCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSC-CCSSCCEEEEEEEEEEGGGSSCCC----------
T ss_pred CCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccC-CCCcceeEEEEEEeecCccccccccCcccccccC
Confidence 58 99999998 4799999999999998754321111 1222248999999 666654322100111
Q ss_pred CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecE
Q psy16562 238 YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDS 317 (445)
Q Consensus 238 ~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~ 317 (445)
....+..++.++|||+.++ .+.|+|++|++|||||+|++.....+.|++|||.|+|++.|| ..+++
T Consensus 219 ~~~~~~~~~~~~iNG~~~~---------~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~ 284 (647)
T 1sdd_B 219 SSEVKNSHEFHAINGMIYN---------LPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGV 284 (647)
T ss_dssp -----CCCEEEEETTBSSC---------CCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESS
T ss_pred CcchhhcCceeccCCEecC---------CCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccce
Confidence 1112346789999999652 368999999999999999996533688999999999999987 46799
Q ss_pred EEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 318 VTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 318 ~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
+.|.||||+|++|++++ +|.|++|||..
T Consensus 285 v~l~pg~r~~v~~~~~~-pG~w~~hch~~ 312 (647)
T 1sdd_B 285 WPLLPGSFKTLEMKASK-PGWWLLDTEVG 312 (647)
T ss_dssp EEECTTEEEEEEEECCS-SEEEEEECCCH
T ss_pred EEECCCeEEEEEEEecc-ceEeecccCcc
Confidence 99999999999999998 79999999987
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=337.34 Aligned_cols=237 Identities=22% Similarity=0.273 Sum_probs=187.9
Q ss_pred CCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 53 AKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 53 ~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
...++++|+|+++... +|. ...++.+||++|||+|+|++||+|+|+|+|.++ +
T Consensus 44 ~~g~~~~~~l~~~~~~-------------------------~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~-~ 97 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKLA-------------------------DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMD-V 97 (343)
T ss_dssp -CCCEEEEEEEEEECG-------------------------GGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSS-S
T ss_pred CCCeEEEEEEEEEEcc-------------------------CCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCC-C
Confidence 3578899999998631 121 112223589999999999999999999999998 8
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-------------CcceEEeccc------chhhhcCce
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-------------SGTFFYHSHV------GLQKMDGLE 192 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-------------~GT~wYH~H~------~~q~~~Gl~ 192 (445)
+++|||||+++. .++||++ ++||+|+||++|+|+|++.+ +||||||||. ..|+.+||+
T Consensus 98 ~~sih~HG~~~~--~~~DG~~-~t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~ 174 (343)
T 3cg8_A 98 RASLHVHGLDYE--ISSDGTA-MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLY 174 (343)
T ss_dssp CBCCEESSSBCC--GGGSCCT-TTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCE
T ss_pred CeeEEecCcccC--CcCCCcc-cccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCe
Confidence 999999999987 3899999 89999999999999999864 4899999996 378999999
Q ss_pred eEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEe
Q psy16562 193 GSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQ 272 (445)
Q Consensus 193 G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~ 272 (445)
|++||+++.... +| .|++|+++|| +|||+..+. .+.|+++
T Consensus 175 G~~iV~~~~~~~-----pd---~e~~l~~~d~------------------------~iNG~~~~~--------~~~l~v~ 214 (343)
T 3cg8_A 175 GPVIVRRKGDVL-----PD---ATHTIVFNDM------------------------TINNRKPHT--------GPDFEAT 214 (343)
T ss_dssp EEEEEECTTCCC-----CS---EEEEEEEETT------------------------EETTCCTTC--------CCCEEEE
T ss_pred EEEEEecCCCCC-----CC---ceEEEEcccc------------------------eecccCCCC--------CccEEeC
Confidence 999999874321 22 3788888775 689986532 3689999
Q ss_pred cCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce----eeEecEEEecCCceEEEEEecC--CCCceEEEEEEec
Q psy16562 273 RDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFPGDRVDVIIHTN--QSNNLYWMQAKTL 346 (445)
Q Consensus 273 ~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~--~~~G~y~~~~~~~ 346 (445)
.|++|||||+|.+.. .+.|+||||.|.|++ ||.... +...+++.|.|||+++|+|+++ ..+|.|++|||..
T Consensus 215 ~Ge~vri~l~N~g~~--~HpfHlHGh~f~v~~-~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~ 291 (343)
T 3cg8_A 215 VGDRVEIVMITHGEY--YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQ 291 (343)
T ss_dssp TTCEEEEEEEEESSC--CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSH
T ss_pred CCCEEEEEEEcCCcc--ccccEecCcEEEEec-cCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCH
Confidence 999999999999975 578889999999874 564432 3567999999999999999974 3489999999987
Q ss_pred -CCCceeeEEEEEcCC
Q psy16562 347 -CDSITAEAVLQYEGE 361 (445)
Q Consensus 347 -~~~~~~~ail~y~~~ 361 (445)
.......+++++...
T Consensus 292 ~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 292 SHSDMGMVGLFLVKKP 307 (343)
T ss_dssp HHHHTTCEEEEEEECT
T ss_pred HHHhccCcEEEEEecC
Confidence 222223445555543
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=379.23 Aligned_cols=226 Identities=18% Similarity=0.187 Sum_probs=172.1
Q ss_pred CeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc--------ccccCCCCCCceE
Q psy16562 95 GFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM--------VTQCPIPSSTTFR 166 (445)
Q Consensus 95 G~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~--------~tq~pI~pG~~~~ 166 (445)
|+.++.|+ ++|||+|||++||+|+|+|+|+|+ +++||||||+++.. +|||+|+ +|||+|+||++|+
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~-~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~t 136 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMAS-HPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHT 136 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSS-SCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEEC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCC-CCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEE
Confidence 44444453 899999999999999999999998 89999999999864 4566554 8999999999999
Q ss_pred EEEecC----------CCcceEEecccch--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccC
Q psy16562 167 YKFPAM----------PSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSM 228 (445)
Q Consensus 167 Y~f~~~----------~~GT~wYH~H~~~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~ 228 (445)
|+|+++ ++||||||||.+. |+.+||+|+|||+++....+.. ..+..|++|++++ |++..
T Consensus 137 Y~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~---~~~~~e~~l~~~~~de~~~w~~~~ 213 (742)
T 2r7e_A 137 YVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEK---TQTLHKFILLFAVFDEGKSWHSET 213 (742)
T ss_dssp CEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTT---TTCCCEECCCEECCCCSSSSCCCC
T ss_pred EEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCccc---CceeeEEEEEeecccCCccccccc
Confidence 999984 4699999999865 8999999999999875433211 1122578888865 33332
Q ss_pred CCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCC
Q psy16562 229 TDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGT 308 (445)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~ 308 (445)
....+............+.++|||+... ..+.|++++|++|||||+|++.....+.|+||||.|+|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~ING~~~~--------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--- 282 (742)
T 2r7e_A 214 KNSLMQDRDAASARAWPKMHTVNGYVNR--------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--- 282 (742)
T ss_dssp CC-------CCSCCCCCCCCEETTBCTB--------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE---
T ss_pred cccccccCCCccccccCceEEECCccCC--------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE---
Confidence 2111110000111223567899999652 13578999999999999999975335778899999999852
Q ss_pred cceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 309 AVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 309 ~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.++++.|.||+++++++.+++ +|.|++|||..
T Consensus 283 -----~~Dtv~v~Pg~~~~v~~~~~~-pG~w~~hCH~~ 314 (742)
T 2r7e_A 283 -----RQASLEISPITFLTAQTLLMD-LGQFLLFCHIS 314 (742)
T ss_dssp -----ECCSCCCCTTCCCEEEECCCS-CSEECCCCCSS
T ss_pred -----ecceEEeCCCcEEEEEEEeCC-CeeEEEEeCCh
Confidence 256778899999999999988 79999999987
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=370.91 Aligned_cols=269 Identities=14% Similarity=0.138 Sum_probs=197.6
Q ss_pred CCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeE--EEEE------EECC-----------CCCCCeEEE
Q psy16562 54 KPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFE--RAIL------SINR-----------QLPGPSIQV 114 (445)
Q Consensus 54 ~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~--~~~~------~~Ng-----------~~PGPtI~v 114 (445)
...+++|.+.++... + +|-.+........++...+|.. +-++ +|++ ++|||+|+|
T Consensus 130 ~g~~r~y~i~a~e~~--w----dyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~ 203 (770)
T 2r7e_B 130 QKKTRHYFIAAVERL--W----DYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRA 203 (770)
T ss_dssp CCCCEEEEEEEEECC--C----CCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCC
T ss_pred CCCEEEEEEEEEEEE--E----eecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEE
Confidence 467899999998742 2 2222221111123444555522 2222 2222 689999999
Q ss_pred EcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC----------CCcceEEecccc
Q psy16562 115 CKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM----------PSGTFFYHSHVG 184 (445)
Q Consensus 115 ~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~----------~~GT~wYH~H~~ 184 (445)
++||+|+|+|+|+|+ ++++|||||+++..+.. ||+++ +||+|+||++|+|+|+++ ++||||||||..
T Consensus 204 ~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~ 280 (770)
T 2r7e_B 204 EVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVD 280 (770)
T ss_dssp CSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSS
T ss_pred EcCCEEEEEEEECCC-CCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCC
Confidence 999999999999998 89999999999988643 69998 999999999999999998 799999999987
Q ss_pred h--hhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEee------eeccCCCCccCCCCCC--C----CCCCCCeEEE
Q psy16562 185 L--QKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTD------WMHSMTDSKFPGNTYN--D----TRIKPDAILI 250 (445)
Q Consensus 185 ~--q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D------~~~~~~~~~~~~~~~~--~----~~~~~~~~lI 250 (445)
. |+.+||+|+|||+++....+....... ..|++|++++ |+++.....+...... . -......++|
T Consensus 281 ~~~q~~~GL~G~liV~~~~~~~~~~~~~~~-d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~I 359 (770)
T 2r7e_B 281 LEKDVHSGLIGPLLVCHTNTLNPAHGRQVT-VQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAI 359 (770)
T ss_dssp SSHHHHTSCCEEEEEECSTTSCSSSCCCCS-SEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECT
T ss_pred cHHHHhCCceeeEEECCCcccccccCCCcc-ceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCcccc
Confidence 5 899999999999987543321111112 2478888754 4444332212111000 0 0112456899
Q ss_pred ccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEE
Q psy16562 251 NGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 251 NG~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v 330 (445)
||+...+ .+.+++++|++|||||+|++.....+.|+||||.|+|++.||. .++++.|.||||++++|
T Consensus 360 NG~~~~~--------~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~ 426 (770)
T 2r7e_B 360 NGYIMDT--------LPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEM 426 (770)
T ss_dssp TSCTTTT--------CCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEE
T ss_pred CCccCCC--------CCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEE
Confidence 9996532 3578999999999999999865346789999999999999983 68999999999999999
Q ss_pred ecCCCCceEEEEEEec
Q psy16562 331 HTNQSNNLYWMQAKTL 346 (445)
Q Consensus 331 ~~~~~~G~y~~~~~~~ 346 (445)
++++ +|.|.+|||..
T Consensus 427 ~ad~-pG~w~~hcH~~ 441 (770)
T 2r7e_B 427 LPSK-AGIWRVECLIG 441 (770)
T ss_dssp CCSS-CBCCCBCCCSH
T ss_pred EeCC-CCceEEEeccc
Confidence 9988 79999999977
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=352.78 Aligned_cols=308 Identities=15% Similarity=0.135 Sum_probs=207.2
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcce
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTF 177 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~ 177 (445)
..+++|||++ ||+|+|++||+|+|+|+|.+. ..+++||||.. ..+||+|+||++++|.|++.++|||
T Consensus 44 g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~-~~h~~~~~g~~-----------~~~~~~i~pG~~~~~~f~~~~~Gt~ 110 (447)
T 2dv6_A 44 GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEG-AQHDVVVDQYA-----------ARSAIVNGKNASSTFSFVASKVGEF 110 (447)
T ss_dssp EESGGGTTCB-SCCEEEETTCEEEEEEECSSS-SCBCCEETTTT-----------EECCCBCSTTBEEEEEEECCSCEEE
T ss_pred ccceeecCCc-CCeEEEcCCCEEEEEEEcCCC-CceEEEEccCC-----------cccceecCCCCeEEEEEEcCCCEEE
Confidence 3456899999 999999999999999999997 56899999863 2378999999999999999999999
Q ss_pred EEecccchhhhcCceeEEEEeCCCCCCCCCCccc---cCCcceEEEEeeeeccCCCC-ccC---CCCCCCCCCCCCeEEE
Q psy16562 178 FYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYD---FDLYSHVIIVTDWMHSMTDS-KFP---GNTYNDTRIKPDAILI 250 (445)
Q Consensus 178 wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d---~d~~e~~l~l~D~~~~~~~~-~~~---~~~~~~~~~~~~~~lI 250 (445)
|||||...|+.+||+|.|+|+++........ ++ .+..+++..+ |+....... .+. .......+...+.++|
T Consensus 111 ~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~-~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ 188 (447)
T 2dv6_A 111 NYYCSIAGHRQAGMEGNIQVLPGNRAEMKSS-GADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLDDNTTYTYWTF 188 (447)
T ss_dssp EEECCSTTHHHHTCEEEEEEESSCCCCCCCS-SBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCChhhCCCEEEEEEeCCccccCCCc-chhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEeccCCceeEEEEE
Confidence 9999998999999999999998754321100 00 0000010000 110000000 000 0000012334578999
Q ss_pred ccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEE
Q psy16562 251 NGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 251 NG~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v 330 (445)
||+ .++|+|++++|++||||++|.+... ..++||+|++ ++.||.+ +.+.|.||||++|+|
T Consensus 189 NG~----------~pgp~i~v~~G~~v~~rl~N~~~~~--~~~~ih~Hg~--~~~DG~~------~~~~i~pG~~~~~~~ 248 (447)
T 2dv6_A 189 NGK----------VPGPFLRVRVGDTVELHLKNHKDSL--MVHSVDFHGA--TGPGGAA------AFTQTDPGEETVVTF 248 (447)
T ss_dssp TTB----------BSCCCEEEETTCEEEEEEEECTTCS--SCBCCEETTC--CSGGGGG------GGCCBCTTCEEEEEE
T ss_pred CCc----------cCCCeEEecCCCEEEEEEEeCCCCc--eeEEEeeccc--cCCCCCC------ccEEeCCCCEEEEEE
Confidence 998 4568999999999999999998532 2334666765 3679974 223599999999999
Q ss_pred ecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCC-----------CC-CCC-----C-----CCCC--C-
Q psy16562 331 HTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSK-----------RP-KSD-----S-----FPRG--K- 379 (445)
Q Consensus 331 ~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~-----------~P-~~~-----~-----~~~~--~- 379 (445)
++++ +|+||||+|.. ..++.+ .|.+.+....+... .+ ... . +... .
T Consensus 249 ~~~~-~G~~~yh~h~~~~~~~~~~Gl~g--~l~v~~~~~~P~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 325 (447)
T 2dv6_A 249 KALI-PGIYVYHCATPSVPTHITNGMYG--LLLVEPEGGLPQVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPEY 325 (447)
T ss_dssp ECCS-CEEEEEECCSSSHHHHHHTTCEE--EEEEECTTCSCCCSEEEEEEEEEECBSSCTTCCEECCBBHHHHHTTCCSE
T ss_pred ECCC-CeEEEEEeCCCChHHHHhCCCEE--EEEEeCCCCCCCCCeeEEEEecccccCCcccccccccCChHHhhccCCCE
Confidence 9987 69999999863 244443 44444332111000 00 000 0 0000 0
Q ss_pred CCCCCCCCcc---ceeEeeCCcEEEEEEEcCCC-CccceEEEEeCeeEEEEecCCccCCC-e-EEeEEEecC
Q psy16562 380 PKDNSPRVPM---HFFKVQRDKRYLMRIIGGSC-LACPLIFTIEKHQLQVIASDGTAVEP-L-VVDSVTLFP 445 (445)
Q Consensus 380 ~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~-~~Hp~~~hihgh~f~Vi~~dG~~~~p-~-~~Dtv~v~p 445 (445)
-..|+...+. ..+++++|+++||||+|++. ..||| |||||+|+||+.||.++.| . ++|+|.|.|
T Consensus 326 ~~iNG~~~~~~~~~~~~v~~g~~vrlrliN~~~~~~h~~--hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~p 395 (447)
T 2dv6_A 326 FLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSF--HVIGEIFDHVYSLGSVVSPPLIGVQTVSVPP 395 (447)
T ss_dssp EEETTSTTCCCCCCCEEECTTCEEEEEEEEEESSCCEEE--EEETCCEEEECGGGCSSSCCEEEESEEEECT
T ss_pred EEECCcccCCCCCcceEECCCCEEEEEEEeCCCCceEeE--EEcCcEEEEEEcCCcccCCCcccccEEEECC
Confidence 0123332221 25889999999999999974 45665 9999999999999998874 4 699999976
|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=334.50 Aligned_cols=248 Identities=20% Similarity=0.230 Sum_probs=199.7
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCC-CCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~ 171 (445)
.+|..+.+|+|||++|||+|+|++||+++|+|+|.+. ...++|||||+. .+||+|..+| |.||++++|.|++
T Consensus 178 ~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~-----~~DG~~~~~~--i~pG~~~~~~~~~ 250 (447)
T 2dv6_A 178 DDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGAT-----GPGGAAAFTQ--TDPGEETVVTFKA 250 (447)
T ss_dssp ETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCC-----SGGGGGGGCC--BCTTCEEEEEEEC
T ss_pred cCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeecccc-----CCCCCCccEE--eCCCCEEEEEEEC
Confidence 3688899999999999999999999999999999986 357999999985 3799987664 9999999999999
Q ss_pred CCCcceEEecccc---hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeeeeccCCCCcc---CCCCCCCCCCCC
Q psy16562 172 MPSGTFFYHSHVG---LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDWMHSMTDSKF---PGNTYNDTRIKP 245 (445)
Q Consensus 172 ~~~GT~wYH~H~~---~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~---~~~~~~~~~~~~ 245 (445)
+++||||||||.. .|..+||+|+|+|+++.. .| .+ | .|++++++||++....... ........+..+
T Consensus 251 ~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-~P---~~--d-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 323 (447)
T 2dv6_A 251 LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-LP---QV--D-REFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKP 323 (447)
T ss_dssp CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-SC---CC--S-EEEEEEEEEECBSSCTTCCEECCBBHHHHHTTCC
T ss_pred CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-CC---CC--C-eeEEEEecccccCCcccccccccCChHHhhccCC
Confidence 9999999999963 788999999999987632 12 23 3 2688999999875331100 000000112357
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCccee-e-EecEEEecCC
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP-L-VVDSVTLFPG 323 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P-~-~~~~~~I~pG 323 (445)
+.++|||+.++.. +.+.+++++|++|||||+|++.. ..+.|+||||.|+||+.||.+++| . ..+++.|.||
T Consensus 324 ~~~~iNG~~~~~~------~~~~~~v~~g~~vrlrliN~~~~-~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg 396 (447)
T 2dv6_A 324 EYFLFNGSVGSLT------RSHPLYASVGETVRIFFGVGGPN-FTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPG 396 (447)
T ss_dssp SEEEETTSTTCCC------CCCCEEECTTCEEEEEEEEEESS-CCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTT
T ss_pred CEEEECCcccCCC------CCcceEECCCCEEEEEEEeCCCC-ceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCC
Confidence 8899999977531 12479999999999999999865 368899999999999999999874 4 5899999999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-CCCceeeEEEEEcCCC
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-CDSITAEAVLQYEGEK 362 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-~~~~~~~ail~y~~~~ 362 (445)
||++++|++++ +|.|++|||.. .......++++|.+..
T Consensus 397 ~r~~i~~~~~~-pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 397 GATIVDFKIDR-AGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEEEEEECCS-CEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred cEEEEEEECCC-CEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 99999999997 79999999987 3334457899998764
|
| >2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=366.41 Aligned_cols=320 Identities=11% Similarity=0.096 Sum_probs=225.4
Q ss_pred eEEEEEEECCCCCC--CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCC-CCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 96 FERAILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV-TPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 96 ~~~~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~-~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
..+.+.++||++|| |+|++|+||+|+|+|.|. .+.+||||++|.+ ++++||++.+| |+|.||.+++|+|.+.
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~----g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA----GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWPD 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC----CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECCC
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC----CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEecC
Confidence 57899999999999 889999999999999965 4569999999998 99999999999 9999999999999999
Q ss_pred CCcceEEecccchhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEE----eeeeccCCCCccCCCCCCCCCCCCCeE
Q psy16562 173 PSGTFFYHSHVGLQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIV----TDWMHSMTDSKFPGNTYNDTRIKPDAI 248 (445)
Q Consensus 173 ~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l----~D~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (445)
++||||||||++.|+.+||.|+++|+++...+ ...+++|. |++++| +||++............ ..+..+..+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~--~~~~~yd~-e~~~~iaa~~~dW~~~~~~~~~~~~~~-~~~~~p~~~ 766 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQS--EDSTFYLG-ERTYYIAAVEVEWDYSPQREWEKELHH-LQEQNVSNA 766 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCC--SCCCCCSE-EEEEEEEEEEEEEESCSCCHHHHHHHH-HHTCCCCCT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCcccc--CCccCCCc-ceEEEEeeeeccccCCcchhhhhhccC-CCccCccce
Confidence 99999999999999999999999999874322 22466764 899999 89999766531100000 000012222
Q ss_pred EEccccC-------------CCCCC-C-----------CCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE
Q psy16562 249 LINGQNQ-------------NPKDN-S-----------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI 303 (445)
Q Consensus 249 lING~~~-------------~~~~~-~-----------~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi 303 (445)
++|+... +.+.+ + ...++|+|++++|+++++|++|.+.. .++||+|++.+.
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~~----~~sih~HGl~~~ 842 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMATR----PYSIHAHGVQTE 842 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSSS----CBCCEESSCBCS
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCCC----CceEeecccccc
Confidence 2232110 00000 1 24678999999999999999999764 344788888776
Q ss_pred ccCCCcceeeEecEEEecCCceEEEEEecCCC---------CceEEEEEEec-----CCCceeeEEEEEcCCCCCC--CC
Q psy16562 304 ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS---------NNLYWMQAKTL-----CDSITAEAVLQYEGEKLTY--VS 367 (445)
Q Consensus 304 a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~---------~G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~--~~ 367 (445)
..+ ...|.||+++++.+.+.+. +|+||||+|.. ..++.+..++...+..... +.
T Consensus 843 ~~~----------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l~~~~~~~ 912 (1065)
T 2j5w_A 843 SST----------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYLKVFNPRR 912 (1065)
T ss_dssp CSC----------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-----CCCC
T ss_pred CCC----------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccccccCCCc
Confidence 542 2357899999999987653 26999999865 3566655454433211000 00
Q ss_pred ---------------------------CCCCCCCCCC------C-CCCCCCCCCc-cceeEeeCCcEEEEEEEcCC--CC
Q psy16562 368 ---------------------------KRPKSDSFPR------G-KPKDNSPRVP-MHFFKVQRDKRYLMRIIGGS--CL 410 (445)
Q Consensus 368 ---------------------------~~P~~~~~~~------~-~~~~~~~~~~-~~~~~v~~G~~~~~rliN~s--~~ 410 (445)
..|....+.. . .-..|+..+. ...+.++.|+++||+|+|.+ .+
T Consensus 913 d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~~~~~iNG~~~~~~~~~~v~~G~~vr~~l~N~g~~~~ 992 (1065)
T 2j5w_A 913 KLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESNKMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEID 992 (1065)
T ss_dssp EEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHTEEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTC
T ss_pred ceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccCceEEECCccCCCCccEEeCCCCEEEEEEEeCCCCCc
Confidence 0000000000 0 0011222211 22578999999999999985 46
Q ss_pred ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 411 ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 411 ~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.||| |||||+|+|++.+ |.++|||.|.|
T Consensus 993 ~Hpf--HlHG~~F~vv~~~-----p~~~DTv~v~p 1020 (1065)
T 2j5w_A 993 LHTV--HFHGHSFQYKHRG-----VYSSDVFDIFP 1020 (1065)
T ss_dssp CEEE--EESSCCEEETTTT-----CEEESEEEECT
T ss_pred ceeE--EEcccEEEEEecC-----CceeeEEEECC
Confidence 7887 9999999999875 88999999976
|
| >2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=351.57 Aligned_cols=222 Identities=21% Similarity=0.262 Sum_probs=171.8
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCC-----CCCcccccCCCCCCceEEEEecCC-Cc--
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMD-----GVPMVTQCPIPSSTTFRYKFPAMP-SG-- 175 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~D-----Gvp~~tq~pI~pG~~~~Y~f~~~~-~G-- 175 (445)
...+|||+|||++||+|+|+|+|+|+ +++||||||+++. ++|+| |+++++||+|+||++|+|+|++++ +|
T Consensus 446 ~~g~pGP~Ir~~~GD~v~v~~~N~l~-~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg 523 (742)
T 2r7e_A 446 ESGILGPLLYGEVGDTLLIIFKNQAS-RPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPT 523 (742)
T ss_dssp SSCSCCCCCCCBTTCEEECCEECCSS-SCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCC
T ss_pred ccCCCCCeEEEECCCEEEEEEEeCCC-CCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCc
Confidence 34689999999999999999999998 8999999999985 45776 567789999999999999999974 43
Q ss_pred -------ceEEecccc--hhhhcCceeEEEEeCCCCCCCCCCccccCCcceEEEEeee------eccCCCCccCCCCCCC
Q psy16562 176 -------TFFYHSHVG--LQKMDGLEGSMIIRTPKTADPHAELYDFDLYSHVIIVTDW------MHSMTDSKFPGNTYND 240 (445)
Q Consensus 176 -------T~wYH~H~~--~q~~~Gl~G~lIV~~~~~~~p~~~~~d~d~~e~~l~l~D~------~~~~~~~~~~~~~~~~ 240 (445)
|||||||.. .|+++||+|+|||+++...++...+++.|. |++|++++| ++......+.......
T Consensus 524 ~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~-E~~l~~~~fde~~~wy~~~~~~~~~~~p~~v 602 (742)
T 2r7e_A 524 KSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDK-RNVILFSVFDENRSWYLTENIQRFLPNPAGV 602 (742)
T ss_dssp SSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSC-CCEEEECBCCGGGSSCSHHHHHHHSSSSSCS
T ss_pred ccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCc-eEEEEeeccccccccccccchhhcccCchhc
Confidence 999999985 468999999999998755444444455654 899999754 3321111111000000
Q ss_pred --CC----CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeE
Q psy16562 241 --TR----IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLV 314 (445)
Q Consensus 241 --~~----~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~ 314 (445)
.. .....++|||+.+.+ .+ +.+++|++|||||+|++.....+.|+||||.|+|+ +..
T Consensus 603 ~~~~~~~~~~~~~~~ING~~~~~--------~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~ 665 (742)
T 2r7e_A 603 QLEDPEFQASNIMHSINGYVFDS--------LQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVY 665 (742)
T ss_dssp CCCCHHHHGGGCCBCTTTTCSSC--------CC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSS
T ss_pred ccccccccccCceeeecCcCCCC--------Cc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccc
Confidence 00 011347899997532 13 89999999999999988643356788999999987 356
Q ss_pred ecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 315 VDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 315 ~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
++++.|.||||++++|++++ +|.|++|||..
T Consensus 666 ~Dtv~l~Pg~~~~v~~~ad~-pG~w~~hcH~~ 696 (742)
T 2r7e_A 666 EDTLTLFPFSGETVFMSMEN-PGLWILGCHNS 696 (742)
T ss_dssp BCSSCCCCCSSEECCEECCC-CCCSCCEECCC
T ss_pred eeEEEECCCcEEEEEEEcCC-CeEEEEEeCCc
Confidence 78999999999999999987 79999999987
|
| >2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-24 Score=216.54 Aligned_cols=179 Identities=18% Similarity=0.256 Sum_probs=132.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc---CCCcceeeEecEEEe
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---DGTAVEPLVVDSVTL 320 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---DG~~v~P~~~~~~~I 320 (445)
....+++||+ .|+|+|+|++|+++|+||+|.+.. .++||+|++.+.+. ||++. ++++.|
T Consensus 22 ~~~~~~~NG~----------~pGP~I~v~~Gd~v~v~v~N~l~~----~~siH~HG~~~~~~~~~DGvp~----vtq~~I 83 (339)
T 2zwn_A 22 DYKVFGFNGQ----------VPGPLIHVQEGDDVIVNVTNNTSL----PHTIHWHGVHQKGTWRSDGVPG----VTQQPI 83 (339)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEEESSS----CBCCEEETCCCTTCGGGSCCBT----TTBCCB
T ss_pred EEEEEEECCc----------cCCCeEEEECCCEEEEEEEECCCC----CccEEeCCCCcCCCcccCCCCc----cccCcc
Confidence 4578999998 678999999999999999999864 34699999999885 99753 578899
Q ss_pred cCCceEEEEEecCCCCceEEEEEEec-----C-CCceeeEEEEEcCCCCCCCCCCCCCC--C-----------CCC--CC
Q psy16562 321 FPGDRVDVIIHTNQSNNLYWMQAKTL-----C-DSITAEAVLQYEGEKLTYVSKRPKSD--S-----------FPR--GK 379 (445)
Q Consensus 321 ~pGeR~dv~v~~~~~~G~y~~~~~~~-----~-~~~~~~ail~y~~~~~~~~~~~P~~~--~-----------~~~--~~ 379 (445)
.|||||+|.|++++ +|+||||+|.. . .++.+..++.-......+. ..+.+ . ... +.
T Consensus 84 ~PG~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~--~~d~e~~l~l~d~~~~~~~~~~~~g~ 160 (339)
T 2zwn_A 84 EAGDSYTYKFKADR-IGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEK--RVTKDVIMMMSTWESAVADKYGEGGT 160 (339)
T ss_dssp CTTCEEEEEEECCS-CEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGG--GCSEEEEEEEEEECGGGTTCTTCCCS
T ss_pred CCCCeEEEEEECCC-CEEEEEEecCCchhhhhcCCceEeEEecCCCcccccc--cCCceEEEEeeheecccccccCCCCC
Confidence 99999999999986 89999999975 3 5666665554322111000 00000 0 000 00
Q ss_pred -------CCCCCCCCc-cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 380 -------PKDNSPRVP-MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 380 -------~~~~~~~~~-~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
-..|+...+ ...+++++|+++||||+|++...||| |||||.|+||+.||.+++ |.++|++.|.|
T Consensus 161 ~~~~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~--hlhGh~f~vi~~DG~~~~~p~~~dtv~l~p 233 (339)
T 2zwn_A 161 PMNVADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAM--HSHGHDMLVTHKDGLPLDSPYYADTVLVSP 233 (339)
T ss_dssp TTSCCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEE--EETTCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred CccccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEE--EECCcEEEEEEeCCeecCCCcEEEEEEECC
Confidence 012222222 12488999999999999999776665 999999999999999987 88999999976
|
| >3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=212.14 Aligned_cols=188 Identities=21% Similarity=0.353 Sum_probs=139.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....++|||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||. ..++++
T Consensus 20 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv----~~vtq~ 85 (499)
T 3pxl_A 20 FSRQAVVVNGV----------TPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGP----AFINQC 85 (499)
T ss_dssp CCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCC----BTTTBC
T ss_pred cEEEEEEECCc----------ccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCC----CccccC
Confidence 45678999998 8899999999999999999998641 012456899999884 46994 346889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC---------CC--------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP---------KS-------------- 372 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P---------~~-------------- 372 (445)
.|.||++|+|.|++++++|+||||+|.. ++++.+..||+-........-... ++
T Consensus 86 pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~~~~~p~~ 165 (499)
T 3pxl_A 86 PISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPGG 165 (499)
T ss_dssp CBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTTSCSSCSS
T ss_pred CCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCccccccCCCCC
Confidence 9999999999999966689999999986 578888766653322110000000 00
Q ss_pred -C-CCCCCC-CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 373 -D-SFPRGK-PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 373 -~-~~~~~~-~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+ .+.++. ...+........++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 240 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNP-NHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFA 240 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESBEEECT
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCe-eEEEEECCCeEEEEEECCcccCceEeeeEEECC
Confidence 0 001111 11111112345789999999999999999876 688999999999999999999999999999976
|
| >3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=211.14 Aligned_cols=188 Identities=19% Similarity=0.309 Sum_probs=139.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....++|||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||.+ .++++
T Consensus 21 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~----~vtq~ 86 (495)
T 3t6v_A 21 FVRPAVNAGGT----------FPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPA----FITQC 86 (495)
T ss_dssp CCEEEEEETTS----------SSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCB----TTTBC
T ss_pred ceEEEEEECCc----------ccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCC----ccccC
Confidence 45578999998 8899999999999999999998641 012456999999885 469943 36889
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC------------------------CCC-
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS------------------------KRP- 370 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~------------------------~~P- 370 (445)
.|.||++|+|.|++++++|+||||+|.. ++++.+..|++-......... ..|
T Consensus 87 pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~~~p~ 166 (495)
T 3t6v_A 87 PIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGAGGAI 166 (495)
T ss_dssp CBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGSCSSSCC
T ss_pred CCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhhccCCCC
Confidence 9999999999999966689999999986 578888766653322110000 000
Q ss_pred CCC-CCCCCCC-CCCCC-CCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 371 KSD-SFPRGKP-KDNSP-RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 371 ~~~-~~~~~~~-~~~~~-~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
..+ .+.++.. ..+.+ ..+...++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 243 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDP-NYDFSIDGHDMTIIETDGVDSQELTVDEIQIFA 243 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCe-eEEEEECCCeEEEEEeCCcccCCEEeeeEEEcC
Confidence 000 0011111 01111 12345789999999999999998876 688999999999999999999999999999976
|
| >3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=213.37 Aligned_cols=184 Identities=18% Similarity=0.241 Sum_probs=138.7
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
.....++|||+ .|+|+|++++||+++++|.|..... ..+||||++.+. ..||. ..+++++
T Consensus 84 ~~~~~~~~NG~----------~PGP~I~~~~GD~v~V~v~N~l~~~---~tsIHwHGl~~~~t~~~DGv----p~vTq~p 146 (580)
T 3sqr_A 84 YTRSAMTFNGT----------VPGPAIIADWGDNLIIHVTNNLEHN---GTSIHWHGIRQLGSLEYDGV----PGVTQCP 146 (580)
T ss_dssp BCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCSSC---CBCEEETTCCCTTCGGGSCC----BTTTBCC
T ss_pred eEEEEEEECCc----------cCCceEEEeCCCEEEEEEEECCCCC---cceEEecccccCCCccccCC----CccccCC
Confidence 35678999999 8899999999999999999999631 345899999985 56995 3468999
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCC------------------------CCCCCCC
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTY------------------------VSKRPKS 372 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~------------------------~~~~P~~ 372 (445)
|.||++|+|.|+++| +|+||||+|.. ++++.+..||+-....... ....+..
T Consensus 147 I~PG~sftY~f~~~q-~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~~~~~~ 225 (580)
T 3sqr_A 147 IAPGDTLTYKFQVTQ-YGTTWYHSHFSLQYGDGLFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTARLGAPPAL 225 (580)
T ss_dssp BCTTCEEEEEEECCC-CEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTTSCCCCB
T ss_pred CCCCCeEEEEEECCC-CcceEEeecccccccCcCEEEEEeeCcccCCCCccceEEEEEEEecCCHHHHHHHHhccCCCCC
Confidence 999999999999987 79999999986 5778887666532211100 0001111
Q ss_pred C-CCCCCCCC-CCC--------CCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEE
Q psy16562 373 D-SFPRGKPK-DNS--------PRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 442 (445)
Q Consensus 373 ~-~~~~~~~~-~~~--------~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~ 442 (445)
+ .+.++... .+. .......++|++|++|||||||++... .+.|+|+||.|+||+.||.+++|..+|+|.
T Consensus 226 d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~-~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~ 304 (580)
T 3sqr_A 226 ENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDS-HFEFAIDNHTLTVIANDLVPIVPYTTDTLL 304 (580)
T ss_dssp SEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESSEE
T ss_pred ceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCc-eeeEEeCCceEEEEEeCCccCCceEeeEEE
Confidence 1 11222211 100 111234789999999999999999887 688999999999999999999999999999
Q ss_pred ecC
Q psy16562 443 LFP 445 (445)
Q Consensus 443 v~p 445 (445)
|.|
T Consensus 305 i~p 307 (580)
T 3sqr_A 305 IGI 307 (580)
T ss_dssp ECT
T ss_pred Ecc
Confidence 876
|
| >3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=196.39 Aligned_cols=180 Identities=18% Similarity=0.240 Sum_probs=129.5
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~I~ 321 (445)
...+++||+ .|+|+|++++|+++++|+.|.+... .+||+|++.+. +.||.+. ++++.|.
T Consensus 22 ~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----~siH~HG~~~~~~~~~DG~p~----~t~~~i~ 83 (318)
T 3g5w_A 22 FHTFAFNGQ----------VPAPLIHVMEGDDVTVNVTNMTTLP----HTIHWHGMLQRGTWQSDGVPH----ATQHAIE 83 (318)
T ss_dssp EEEEEETTB----------SSCCEEEEETTCEEEEEEEECSSSC----BCCEEETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCc----------cCCceEEEeCCCEEEEEEEeCCCCc----eeEEecCcCCCCCcccCCCcc----cccccCC
Confidence 468999998 7789999999999999999998653 34777877765 5799653 5678999
Q ss_pred CCceEEEEEecCCCCceEEEEEEec-C-----CCceeeEEEEEcCCCCCCCCCC-------CCCC----------CCCCC
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL-C-----DSITAEAVLQYEGEKLTYVSKR-------PKSD----------SFPRG 378 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~-~-----~~~~~~ail~y~~~~~~~~~~~-------P~~~----------~~~~~ 378 (445)
||++++|.+++++ +|+||||+|.. . .++.+..|+.-......+.... -++. ..+..
T Consensus 84 PG~~~~y~f~~~~-~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~ 162 (318)
T 3g5w_A 84 PGDTFTYKFKAEP-AGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKPGEGGIPGD 162 (318)
T ss_dssp TTCEEEEEEECCS-CEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCTTCCCCTTC
T ss_pred CCCEEEEEEEcCC-CEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccccccCCCCCC
Confidence 9999999999986 89999999975 1 4666655554222110000000 0000 00000
Q ss_pred ---CCCCCCCCCcc-ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 ---KPKDNSPRVPM-HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 ---~~~~~~~~~~~-~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
.-..|+..++. ..+++++|+++||||+|++...|+| |||||.|+||++||.++ +|.++|+|.|.|
T Consensus 163 ~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~--hlhGh~f~vi~~dG~~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 163 VFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAI--HTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232 (318)
T ss_dssp CCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEE--EETTSCEEEEEETTEEEEEEEEESEEEECT
T ss_pred cCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEE--EECCcEEEEEecCCcccCCCccccEEEECC
Confidence 00122222221 2489999999999999999888776 99999999999999988 589999999986
|
| >1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=203.87 Aligned_cols=183 Identities=21% Similarity=0.281 Sum_probs=137.4
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
.....+++||+ .|+|+|++++|+++++++.|..... ..+||||++.+. ..||.+ .++++.
T Consensus 20 ~~~~~~~~Ng~----------~PGP~i~~~~Gd~v~v~v~N~l~~~---~tsiHwHG~~~~~~~~~DG~~----~vtq~p 82 (534)
T 1zpu_A 20 KSRPVITCNGQ----------FPWPDITVNKGDRVQIYLTNGMNNT---NTSMHFHGLFQNGTASMDGVP----FLTQCP 82 (534)
T ss_dssp CCEEEEEETTB----------SSCCCEEEETTCEEEEEEECCCSSC---CBCCEEETCCCTTCGGGSCCB----TTTBCC
T ss_pred ceEEEEEECCc----------cCCccEEEECCCEEEEEEEeCCCCC---CeeEEcCCcccCCCCcccCCC----ccccCC
Confidence 45678999998 7889999999999999999999721 345899999885 469954 367899
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC----CCC-----C----CCC-----C
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP----KSD-----S----FPR-----G 378 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P----~~~-----~----~~~-----~ 378 (445)
|.||++++|.|++++++|+||||+|.. ++++.+..||+-...+.......+ ++. . +.. +
T Consensus 83 I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g 162 (534)
T 1zpu_A 83 IAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTG 162 (534)
T ss_dssp BCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTCCSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTC
T ss_pred cCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCCCCCCcceEEEEeeccccCCHHHHHHHHhccccCCC
Confidence 999999999999996689999999987 577877766654332100000000 000 0 000 0
Q ss_pred C------CCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 379 K------PKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 379 ~------~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
. ...|+.. ...++|++|++|||||+|++... .+.|+|+||.|+||+.||.+++|..+|+|.|+|
T Consensus 163 ~~~~~d~~liNG~~--~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~ 232 (534)
T 1zpu_A 163 AEPIPQNLIVNNTM--NLTWEVQPDTTYLLRIVNVGGFV-SQYFWIEDHEMTVVEIDGITTEKNVTDMLYITV 232 (534)
T ss_dssp CCCCCSEEEETTBS--SCEEECCSSCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred CCCCCceEEECCCC--ceEEEEECCCEEEEEEEeccCCc-eEEEEEcCCeeEEEeccCcCccccEeceEEECc
Confidence 0 0012221 23689999999999999999887 588999999999999999999999999999876
|
| >1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-21 Score=201.23 Aligned_cols=187 Identities=22% Similarity=0.345 Sum_probs=136.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEEE
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT 319 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~ 319 (445)
....+++||+ .|+|+|++++|+++++++.|..... .....+||||++.+. ..||++ .++++.
T Consensus 42 ~~~~~~~NG~----------~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~----~vtq~~ 107 (521)
T 1v10_A 42 ARSAVTAEGT----------TIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPA----FVNQCP 107 (521)
T ss_dssp CEEEEEESSS----------SSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCB----TTTBCC
T ss_pred eEEEEEECCc----------cCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCc----ceeeCC
Confidence 5678999998 7889999999999999999999720 002455899999884 369954 357889
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC--CCC------------CCC----C-
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP--KSD------------SFP----R- 377 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P--~~~------------~~~----~- 377 (445)
|.||++++|.|++.+++|+||||+|.. .+++.+..||+-..+.....-..+ +.. .+. .
T Consensus 108 I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~~~~~ 187 (521)
T 1v10_A 108 IIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTVLFPNPNKA 187 (521)
T ss_dssp BCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-------CC
T ss_pred cCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHHHhhccCCC
Confidence 999999999999655689999999987 477877766654332110000000 000 000 0
Q ss_pred ----CCCCCCCCC--------CccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 ----GKPKDNSPR--------VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ----~~~~~~~~~--------~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.....|+.. .+...++|++|++|||||+|++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 188 ~~~~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 266 (521)
T 1v10_A 188 PPAPDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFA 266 (521)
T ss_dssp CSCCSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCCCCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcc-cEEEEECCCeEEEEecCCccccceeeeeEEEcc
Confidence 000012211 1224789999999999999999887 688999999999999999999999999999876
|
| >1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-21 Score=202.44 Aligned_cols=184 Identities=20% Similarity=0.296 Sum_probs=137.0
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....++|||+ .|+|+|++++|+++++++.|..... ..+||||++.+.. .||++- ++++
T Consensus 19 g~~~~~~~~Ng~----------~PGP~I~~~~GD~v~v~v~N~l~~~---~tsiHwHGl~~~~~~~~DGv~~----vtq~ 81 (552)
T 1aoz_A 19 CNENIVMGINGQ----------FPGPTIRANAGDSVVVELTNKLHTE---GVVIHWHGILQRGTPWADGTAS----ISQC 81 (552)
T ss_dssp SSCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCSSC---CBCEEEETCCCTTCGGGSCCBT----TTBC
T ss_pred CceEEEEEECCc----------cCCCcEEEeCCCEEEEEEEeCCCCC---CeeEEeCCCccCCCcccCCCcc----cccC
Confidence 345678999998 7889999999999999999999621 3458999998865 599643 6789
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCC---------------------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSK--------------------------- 368 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~--------------------------- 368 (445)
.|.||++++|.|++++ +|+||||+|.. .+++.+..||+-......+...
T Consensus 82 ~I~PG~s~tY~f~~~~-~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~ 160 (552)
T 1aoz_A 82 AINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKP 160 (552)
T ss_dssp CBCTTCEEEEEEECCS-CEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSS
T ss_pred CcCCCCeEEEEEECCC-CEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhccc
Confidence 9999999999999965 89999999987 4778777776654321111000
Q ss_pred -----CCCCCCCCCCCCCCC------------------CCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEE
Q psy16562 369 -----RPKSDSFPRGKPKDN------------------SPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV 425 (445)
Q Consensus 369 -----~P~~~~~~~~~~~~~------------------~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~V 425 (445)
.|+. .+.++....+ ....+...++|++|++|||||||++... .+.|||+||.|+|
T Consensus 161 ~~~~~~~~~-~liNG~~~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~-~~~~~i~gh~~~v 238 (552)
T 1aoz_A 161 IRWIGEPQT-ILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALA-ALNFAIGNHQLLV 238 (552)
T ss_dssp CCCCCSCSE-EEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSC-EEEEEETTCCEEE
T ss_pred ccCCCCCCe-EEECCccccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccc-eEEEEEcCcEEEE
Confidence 0000 0111111100 0001122689999999999999998876 6889999999999
Q ss_pred EecCCccCCCeEEeEEEecC
Q psy16562 426 IASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 426 i~~dG~~~~p~~~Dtv~v~p 445 (445)
|+.||.+++|..+|++.|.|
T Consensus 239 i~~DG~~~~P~~~~~l~i~p 258 (552)
T 1aoz_A 239 VEADGNYVQPFYTSDIDIYS 258 (552)
T ss_dssp EEETTEEEEEEEESCEEECT
T ss_pred EEECCcccCceEEeEEEEcC
Confidence 99999999999999999876
|
| >1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=200.09 Aligned_cols=187 Identities=21% Similarity=0.351 Sum_probs=136.2
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEE---ccCCCcceeeEecEE
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVI---ASDGTAVEPLVVDSV 318 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~ 318 (445)
.....+++||+ . +|+|++++|+++++++.|..... +....+||||++.+. ..||++ .++++
T Consensus 21 ~~~~~~~~NG~----------~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~----~vtq~ 85 (503)
T 1hfu_A 21 FTRAGILVNGV----------H-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGAD----GVNQC 85 (503)
T ss_dssp CCEEEEEETTB----------S-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCB----TTTBC
T ss_pred eEEEEEEECCc----------c-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCc----ccccC
Confidence 45578999998 6 68999999999999999999710 002345899999883 369954 35788
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCCCCC--CCC--------------------
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVSKRP--KSD-------------------- 373 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~~~P--~~~-------------------- 373 (445)
.|.||++++|.|++.+++|+||||+|.. ++++.+..|++-..+........+ +..
T Consensus 86 ~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~~~~~ 165 (503)
T 1hfu_A 86 PISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQGAAQP 165 (503)
T ss_dssp CBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---CC
T ss_pred CcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcCCCCC
Confidence 9999999999999655689999999987 577877776654332110000000 000
Q ss_pred --CCCCCCC-CCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 374 --SFPRGKP-KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 374 --~~~~~~~-~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+.++.. ..+....+...++|++|++|||||+|++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 166 d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 239 (503)
T 1hfu_A 166 DATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 239 (503)
T ss_dssp SEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcc-cEEEEEcCceEEEEeccCccccccccCeEEEcc
Confidence 0011111 1111112235789999999999999999887 688999999999999999999999999999876
|
| >2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-21 Score=201.84 Aligned_cols=182 Identities=19% Similarity=0.207 Sum_probs=134.8
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEEec
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~I~ 321 (445)
...+++||+ .|+|+|++++|+++++++.|..... ..+||||++.+. ..||++ .++++.|.
T Consensus 55 ~~~~~~Ng~----------~PGP~i~~~~GD~v~v~v~N~l~~~---~tsiHwHG~~~~~~~~~DG~~----~~tq~~I~ 117 (559)
T 2q9o_A 55 EKVMLINGN----------IMGPNIVANWGDTVEVTVINNLVTN---GTSIHWHGIXQKDTNLHDGAN----GVTECPIP 117 (559)
T ss_dssp EEEEEETTB----------SSCCCEEEETTCEEEEEEEEECSSC---CBCEEEETCCCTTCGGGSCCB----TTTBCCBC
T ss_pred eEEEEECCc----------ccCCcEEEeCCCEEEEEEEeCCCCC---CceEEcCCCccCCCCCcCCCC----ccccCccC
Confidence 578999998 7889999999999999999999432 345899999884 469954 35788999
Q ss_pred C-CceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEEcCCCCCCCC------------------------CCCCCC
Q psy16562 322 P-GDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQYEGEKLTYVS------------------------KRPKSD 373 (445)
Q Consensus 322 p-GeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y~~~~~~~~~------------------------~~P~~~ 373 (445)
| |++++|.|+++| +|+||||+|.. ..++.+..||+-......... ..+..+
T Consensus 118 P~G~~~~Y~f~~~q-~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~d~d~~~l~l~Dw~~~~~~~~~~~~~~~~~~~~d 196 (559)
T 2q9o_A 118 PKGGQRTYRWRARQ-YGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDLGVFPITDYYYRAADDLVHFTQNNAPPFSD 196 (559)
T ss_dssp TTTEEEEEEEECCS-CEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTTSCCCCBS
T ss_pred CCCCeEEEEEECCC-CEEEEEEEcccchhcCCceEEEEecCCCcCCCcccceEEEEeccccCCHHHHhhhhhcCCCCccc
Confidence 9 999999999987 89999999987 477777766653221110000 000000
Q ss_pred -CCCCCCCCC-CCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 374 -SFPRGKPKD-NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 374 -~~~~~~~~~-~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+.++.... ....-....+++++|++|||||||++... .+.|||+||.|+||+.||.+++|..+|++.|+|
T Consensus 197 ~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~p 269 (559)
T 2q9o_A 197 NVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTEN-HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAV 269 (559)
T ss_dssp EEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred eeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCc-eEEEEECCCceEEEecCCcccCceEeCeEEEcc
Confidence 011111100 00000134689999999999999999887 688999999999999999999999999999876
|
| >3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=182.97 Aligned_cols=180 Identities=9% Similarity=0.064 Sum_probs=128.6
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|++++|+++++++.|.+... .. ||+|++...+.||.+. ++++.|.||
T Consensus 53 ~~~~~~~ng~----------~pgP~i~~~~Gd~v~v~~~N~~~~~--~~--iH~HG~~~~~~DG~p~----~~~~~i~PG 114 (288)
T 3gdc_A 53 IFKGWSYNGR----------IPGPTLWAREGDALRIHFTNAGAHP--HT--IHFHGVHRATMDGTPG----IGAGSIAPG 114 (288)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEECSSSC--BC--CEESSCCCGGGSCCTT----STTCSBCTT
T ss_pred EEEEEEECCc----------cCCCcEEEeCCCEEEEEEEeCCCCc--cc--EEeccccccccCCCCC----ccceeECCC
Confidence 4578999998 6789999999999999999998753 33 6666666667899764 467889999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCC----CCCCCCCCCC----CCCCCCCCc-
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKR----PKSDSFPRGK----PKDNSPRVP- 388 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~----P~~~~~~~~~----~~~~~~~~~- 388 (445)
++++|.|++++ +|+||||+|.. ..++.+..|+.-........... -++. ...+. -..|+..++
T Consensus 115 ~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~~~d~e~~l~~~d~~-~~~g~~~~~~~iNG~~~~~ 192 (288)
T 3gdc_A 115 QSFTYEFDATP-FGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPPADDEMVMVMNGYN-TDGGDDNEFYSVNGLPFHF 192 (288)
T ss_dssp CEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCCCCSEEEEEEEEEEC-CSSTTCCSEEEETTSTTHH
T ss_pred CEEEEEEEcCC-CccEEEEecCcchHHHHhCcCeEEEEEeCCccCCCCcceEEEEEeeEe-cCCCCCcceEEECcccccc
Confidence 99999999975 89999999974 36777776664433211000000 0000 00000 012333332
Q ss_pred -cceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 -MHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 -~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++++.|+++||||+|.+.. .||| |||||+|+|++.++....|.++||+.|.|
T Consensus 193 ~~~~l~v~~Ge~vr~~l~N~g~~~~~H~f--HlhG~~f~v~~~g~~~~~~~~~Dtv~v~p 250 (288)
T 3gdc_A 193 MDFPVKVKQHELVRIHLINVLEYDPINSF--HIHGNFFHYYPTGTMLTPSEYTDTISQVQ 250 (288)
T ss_dssp HHSCEEEETTCCEEEEEEECCCSSSEEEE--EETTCCEEEEETTCCSSCSEEESEEEEET
T ss_pred cCcccccCCCCEEEEEEEeCCCCCcceeE--EEcCCEEEEEcCCCccCCCceeeEEEeCC
Confidence 2358999999999999999854 4777 99999999998655555579999999976
|
| >2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-20 Score=195.09 Aligned_cols=178 Identities=16% Similarity=0.187 Sum_probs=132.7
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEec
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLF 321 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~ 321 (445)
.....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||++ ++.|.
T Consensus 36 ~~~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~-------~~~i~ 94 (451)
T 2uxt_A 36 TRASVWGINGR----------YLGPTIRVWKGDDVKLIYSNRLTEN----VSMTVAGLQVPGPLMGGP-------ARMMS 94 (451)
T ss_dssp SSSCCEEETTS----------SBCCEEEEETTCEEEEEEEECSSSC----BCEEEETCCCCGGGSCSG-------GGCBC
T ss_pred ceeEEEEECCc----------ccCceEEEeCCCEEEEEEEECCCCC----ccEEECCccCCCCCCCCC-------cCcCC
Confidence 45678999998 7889999999999999999999753 448899888865 59965 57799
Q ss_pred CCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCC---CCCCCCCCC-------C------
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSK---RPKSDSFPR-------G------ 378 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~---~P~~~~~~~-------~------ 378 (445)
||++++|.|++++++|+||||+|.. +.++.+..|++-......+.+. .-+...+++ +
T Consensus 95 PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~ 174 (451)
T 2uxt_A 95 PNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNE 174 (451)
T ss_dssp TTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCC
T ss_pred CCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceeccc
Confidence 9999999999998789999999973 4778887776543221110000 000000000 0
Q ss_pred ---------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 ---------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 ---------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
....|+... +.+++++| +|||||+|++... .+.||| |||.|+||+.||.++ +|..+|++.|+|
T Consensus 175 ~~~~~~~~d~~liNG~~~--p~~~v~~g-~~RlRliNa~~~~-~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~p 248 (451)
T 2uxt_A 175 PGSGGFVGDTLLVNGVQS--PYVEVSRG-WVRLRLLNASNSR-RYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAP 248 (451)
T ss_dssp CSSSCCCCSEEEETTEES--CEEEECSS-EEEEEEEECCSSC-CEEEEETTSCCEEEEECSSSEEEEEEEESSEEECT
T ss_pred ccCCCCcCCEEEECCccc--ceEEecCC-EEEEEEEccCCce-eEEEEECCCCeEEEEEeCCCccCCceEeceEEECc
Confidence 000122212 36899999 9999999999876 688999 899999999999987 699999999876
|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-20 Score=185.01 Aligned_cols=173 Identities=14% Similarity=0.154 Sum_probs=124.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|+|++|++++||++|.+....++. +|+|++. +.||.+. ...|.||
T Consensus 57 ~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~--ih~HG~~--~~dG~~~------~~~i~PG 116 (327)
T 1kbv_A 57 EYRYWTFDGD----------VPGRMIRVREGDTVEVEFSNNPSSTVPHN--VDFHAAT--GQGGGAA------ATFTAPG 116 (327)
T ss_dssp EEEEEEETTB----------SSCCBEEEETTCEEEEEEEECTTCSSCBC--CEETTCC--SGGGGTT------TTCBCTT
T ss_pred EEEEEEECCc----------cCCCeEEEeCCCEEEEEEEECCCCCCcee--eEeCccc--cCCCCCc------ceeecCC
Confidence 4467999998 67899999999999999999985322344 5556553 6788642 1249999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCCCCCCC---------C-C-----------
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKRPKSDS---------F-P----------- 376 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~P~~~~---------~-~----------- 376 (445)
++++|.|++++ +|+||||+|.. ..++.+..+++ .... . |..+. . .
T Consensus 117 ~~~~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~-~~~~-~-----p~~d~e~~l~~~d~~~~~~~~~~g~~~~ 188 (327)
T 1kbv_A 117 RTSTFSFKALQ-PGLYIYHCAVAPVGMHIANGMYGLILVE-PKEG-L-----PKVDKEFYIVQGDFYTKGKKGAQGLQPF 188 (327)
T ss_dssp EEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEE-CTTC-C-----CCCSEEEEEEEEEECBSSCTTCCEEECB
T ss_pred CEEEEEEECCC-CeEEEEEeCCCChhhhhhcceEEEEEEe-cCCC-C-----CCCceEEEEEeeeeeccCcccccccccc
Confidence 99999999988 79999999863 36676665554 2211 1 11100 0 0
Q ss_pred ---------CCCCCCCCCCCcc---ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEec
Q psy16562 377 ---------RGKPKDNSPRVPM---HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLF 444 (445)
Q Consensus 377 ---------~~~~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~ 444 (445)
......|+...+. ..+++++|++|||||+|++... .+.||||||.|+||+.||.+++|..+|++.|.
T Consensus 189 ~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~~vRlRliN~~~~~-~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~ 267 (327)
T 1kbv_A 189 DMDKAVAEQPEYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNL-VSSFHVIGEIFDKVYVEGGKLINENVQSTIVP 267 (327)
T ss_dssp CHHHHHHTCCSEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEEC
T ss_pred ChhHhccCCCceEEEcCcccCCCCceeEEeCCCCEEEEEEECCCCCC-ceeEEEeCCEEEEEEcCCCcCCCCceeEEEEC
Confidence 0000123333322 3589999999999999998644 45669999999999999999999999999997
Q ss_pred C
Q psy16562 445 P 445 (445)
Q Consensus 445 p 445 (445)
|
T Consensus 268 p 268 (327)
T 1kbv_A 268 A 268 (327)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.7e-20 Score=181.88 Aligned_cols=163 Identities=15% Similarity=0.198 Sum_probs=118.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEE-EccCCCcceeeEecEEEecCCceEEEEEecCCC-------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV-IASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS------- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v-ia~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~------- 335 (445)
.|+|+|++++|+++|+||+|.+.. ++. ||+|++.+ ++.||.++ +++.|.|||+++|.|+++++
T Consensus 74 ~pGP~I~v~~Gd~v~v~~~N~l~~--~~s--ih~HG~~~~~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~ 144 (343)
T 3cg8_A 74 VPGPLIEVNEGDTLHIEFTNTMDV--RAS--LHVHGLDYEISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGT 144 (343)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS--CBC--CEESSSBCCGGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred ccCCEEEEECCCEEEEEEEECCCC--Cee--EEecCcccCCcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccc
Confidence 778999999999999999999965 233 77777666 67899764 57789999999999999763
Q ss_pred -----CceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCC-ccceeEeeCCc
Q psy16562 336 -----NNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRV-PMHFFKVQRDK 398 (445)
Q Consensus 336 -----~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~-~~~~~~v~~G~ 398 (445)
.|+||||+|.. ..++.+..|++..+.. .|+.+ .+.+.. ..|+..+ ....+.++.|+
T Consensus 145 ~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~------~pd~e~~l~~~d~-~iNG~~~~~~~~l~v~~Ge 217 (343)
T 3cg8_A 145 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------LPDATHTIVFNDM-TINNRKPHTGPDFEATVGD 217 (343)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------CCSEEEEEEEETT-EETTCCTTCCCCEEEETTC
T ss_pred cCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC------CCCceEEEEcccc-eecccCCCCCccEEeCCCC
Confidence 48899999851 3567777777655432 12211 111110 1222221 22368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC----CeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE----PLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~----p~~~Dtv~v~p 445 (445)
++||+|+|.+.+.||| |||||+|+|++ +|.... +.++||+.|.|
T Consensus 218 ~vri~l~N~g~~~Hpf--HlHGh~f~v~~-~G~~~~p~~~~~~~Dtv~v~P 265 (343)
T 3cg8_A 218 RVEIVMITHGEYYHTF--HMHGHRWADNR-TGILTGPDDPSRVIDNKITGP 265 (343)
T ss_dssp EEEEEEEEESSCCEEE--EETTCCEESSS-SSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEEEcCCcccccc--EecCcEEEEec-cCcccCCCCcccceeeEEeCC
Confidence 9999999999888887 99999999974 565432 47899999976
|
| >3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.6e-19 Score=174.53 Aligned_cols=164 Identities=14% Similarity=0.191 Sum_probs=119.6
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCC--------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ-------- 334 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~-------- 334 (445)
.|+|+|++++||+++++|.|.+... .+||+|++.+- +.||.++ ++..|.||++++|.+++++
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~~~----~siH~HG~~~~~~~DG~~~-----~~~~i~PG~t~~Y~~~~~~~~~~~~~~ 125 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTDRV----LSLHPHGVDYDVNSDGTLM-----NGSAVMPGQTRRYTWRSHVGYRRADGS 125 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSSC----BCCEESSSBCCGGGSCCTT-----TTCCBCTTCEEEEEEBCCCCEECTTSC
T ss_pred ccCceEEEECCeEEEEEEEECCCCC----ccEEeCCcccCCccCCCcc-----ccCccCCCCeEEEEEEeecccccCCCc
Confidence 7899999999999999999998753 34788887664 4699653 5677999999999999863
Q ss_pred ----CCceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCC-CccceeEeeCCc
Q psy16562 335 ----SNNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPR-VPMHFFKVQRDK 398 (445)
Q Consensus 335 ----~~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~-~~~~~~~v~~G~ 398 (445)
.+|+||||+|.. ..++.+..|+.-.+.. .|+.+ .+.+... .++.. .....++++.|+
T Consensus 126 ~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~------~~d~e~~l~~~~~~-~Ng~~~~~~p~l~v~~Ge 198 (299)
T 3t9w_A 126 WAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL------LPKRQFTVVFNDMM-INNRAHHDAPTFEANLGE 198 (299)
T ss_dssp EECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC------CCSEEEEEEEETTE-ETTCCTTCCCEEEEETTC
T ss_pred CCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc------Cccccceeeeeeee-ecCccccccccceecCCC
Confidence 469999999864 1466676666533321 12221 1111110 11111 122368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
++||+|+|.+...||| |||||.|+|+..++.... +.++|++.|.|
T Consensus 199 ~Vr~~liN~~~~~Hpf--HlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~P 246 (299)
T 3t9w_A 199 RVEWIAIGHGSNFHTF--HLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNP 246 (299)
T ss_dssp EEEEEEEEESSCCCEE--EETTCCEESSSSSSCCSTTCCCCEESEEECCT
T ss_pred EEEEEEEeccccceee--eEecceEEEEecccccCCcCCCCceeeEEeCC
Confidence 9999999999988887 999999999999887665 45889998876
|
| >3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=4.2e-19 Score=175.24 Aligned_cols=165 Identities=13% Similarity=0.159 Sum_probs=120.3
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCC--------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQ-------- 334 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~-------- 334 (445)
.|+|+|+++.||+++++|.|.+... .+||+|++.+- +.||.+. ++..|.||++++|.+++.+
T Consensus 39 ~PGP~i~~~~Gd~v~v~~~N~l~~~----~siH~HG~~~~~~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~ 109 (313)
T 3tas_A 39 IPGPLIELNEGDTLHIEFENTMDVP----VSLHVHGLDYEISSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGT 109 (313)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSSC----BCCEESSSBCCGGGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSC
T ss_pred ccCCeEEEECCCEEEEEEEECCCCC----ccEeecCCcCCccCCCCcc-----ccCCcCCCCEEEEEEEeccCCcccccc
Confidence 7899999999999999999998753 34788888764 4599653 5667999999999998752
Q ss_pred ----CCceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCCccceeEeeCCcE
Q psy16562 335 ----SNNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRVPMHFFKVQRDKR 399 (445)
Q Consensus 335 ----~~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~~~~~~~v~~G~~ 399 (445)
+.|+||||+|.. ..++.+..|+.-.+.. .++.+ .+.+.....+........+.++.|++
T Consensus 110 ~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~------~~d~e~~l~~~d~t~Ng~~~~~~~~l~v~~Ge~ 183 (313)
T 3tas_A 110 WRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV------LPDRTHTIVFNDMTINNRPAHTGPDFEATVGDR 183 (313)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB------CCSEEEEEEEETTEETTCCTTCCCCEEEETTCE
T ss_pred ccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc------cccccceeeccchhcccCCcccccccccccCCE
Confidence 369999999864 2567777666543321 12211 11111100111111223589999999
Q ss_pred EEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 400 YLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 400 ~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
+||||+|.+.+.||| |||||.|+|+..||.... |.++||+.|.|
T Consensus 184 vr~~liN~g~~~hpf--HlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~P 230 (313)
T 3tas_A 184 VEFVMITHGEYYHTF--HLHGHRWADNRTGMLTGPDDPSQVIDNKICGP 230 (313)
T ss_dssp EEEEEEEESSCCEEE--EETTCCEESSTTSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEecccccceee--eecCCeeEEEEECCccCCCCCCeeeeEEEeCC
Confidence 999999999888876 999999999999987664 78999999986
|
| >3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.2e-19 Score=183.12 Aligned_cols=173 Identities=17% Similarity=0.210 Sum_probs=129.2
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||.+ ++.|.|
T Consensus 69 ~~~~~~~NG~----------~PGPtIr~~~Gd~v~v~v~N~l~~~----tsiHwHGl~~~~~~DG~p-------q~~I~P 127 (481)
T 3zx1_A 69 KTLFYTYNGL----------VPAPKIEVFEGDKLEILVKNKLKEA----TTIHWHGVPVPPDQDGSP-------HDPILA 127 (481)
T ss_dssp CEEEEEETTB----------SSCCBEEEETTCEEEEEEEECSSSC----BCCEEETCCCCGGGSCCT-------TSCBCT
T ss_pred EEEEEEECCC----------CCCceEEEECCcEEEEEEEeCCCCC----eeEEecCcccCCccCCCc-------cCcCCC
Confidence 4578999998 7889999999999999999999753 458899988754 59963 578999
Q ss_pred CceEEEEEecCCC-CceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCC-------C-----CCCC------
Q psy16562 323 GDRVDVIIHTNQS-NNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPK-------S-----DSFP------ 376 (445)
Q Consensus 323 GeR~dv~v~~~~~-~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~-------~-----~~~~------ 376 (445)
|++++|.|+++++ +|+||||+|.. ..++.+..||+-....... +|. + ..+.
T Consensus 128 G~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~---~~~~~l~l~D~~~~~~g~~~~~~~~~ 204 (481)
T 3zx1_A 128 GEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSH---LKEKDLMISDLRLDENAQIPNNNLND 204 (481)
T ss_dssp TCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTT---SEEEEEEEEEECCBTTSCCCCCCHHH
T ss_pred CCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccC---CCceeEEEEEEeccCCCccccccchh
Confidence 9999999999875 69999999963 3778887776544322110 010 0 0000
Q ss_pred ------CCCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 377 ------RGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 377 ------~~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
......|+... +.+++++|+ ||||+|++... .+.|+|+||.|+||+.||..+ +|..+|++.|+|
T Consensus 205 ~~~g~~gd~~lvNG~~~--p~l~v~~g~--RlRliNa~~~~-~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~p 275 (481)
T 3zx1_A 205 WLNGREGEFVLINGQFK--PKIKLATNE--RIRIYNATAAR-YLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSP 275 (481)
T ss_dssp HHHCCCCSEEEETTEES--CEEEEETTE--EEEEEECCSSC-CEEEEETTCEEEEEEETTEEEEEEEEESSEEECT
T ss_pred hccCCcCCEEEECCccC--ceEEecCCC--EEEEEecCCCe-EEEEEECCCceEEEEcCCCccCCceEeCeEEECC
Confidence 00001122222 268999999 99999999887 689999999999999998765 589999998876
|
| >2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.7e-19 Score=182.79 Aligned_cols=176 Identities=15% Similarity=0.199 Sum_probs=127.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++||++++++.|..... .+||||++.+-. .||.+ +.|.|
T Consensus 34 ~~~~~~~ng~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~--------~~I~P 91 (439)
T 2xu9_A 34 RATLLTYGGS----------FPGPTLRVRPRDTVRLTLENRLPEP----TNLHWHGLPISPKVDDPF--------LEIPP 91 (439)
T ss_dssp EEEEEEETTB----------SSCCEEEECTTCEEEEEEEECSSSC----BCCEEETCCCCTTTSCTT--------CCBCT
T ss_pred eEEEEEECCc----------ccCCEEEEeCCCEEEEEEEECCCCC----cceEeCCCCCCccccCCc--------ccCCC
Confidence 4578999998 7889999999999999999999753 348888887754 68854 23999
Q ss_pred CceEEEEEecC-CCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCCC-----------CCC------
Q psy16562 323 GDRVDVIIHTN-QSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSDS-----------FPR------ 377 (445)
Q Consensus 323 GeR~dv~v~~~-~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~~-----------~~~------ 377 (445)
|++|+|.|+++ +++|+||||+|.. ..++.+..|++-..+.........+... +..
T Consensus 92 G~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~~~~~~~~~~ 171 (439)
T 2xu9_A 92 GESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGRPAPHTPMDW 171 (439)
T ss_dssp TCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTEECCCCHHHH
T ss_pred CCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCCcCCCCcccc
Confidence 99999999975 3589999999963 4677777666432211000000000000 000
Q ss_pred ------CCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 378 ------GKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 378 ------~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
.....|+.. ...+++++| +|||||+|++... .+.|||+||.|+||+.||.++ +|..+|++.|+|
T Consensus 172 ~~g~~~~~~~iNG~~--~p~l~v~~g-~~RlRliN~~~~~-~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~p 242 (439)
T 2xu9_A 172 MNGKEGDLVLVNGAL--RPTLVAQKA-TLRLRLLNASNAR-YYRLALQDHPLYLIAADGGFLEEPLEVSELLLAP 242 (439)
T ss_dssp HHCCCCSEEEETTEE--SCEEECSSS-EEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccCCCCCEEEECCcc--CCcEEecCC-eEEEEEEecCCCc-eEEEEECCceEEEEecCCCCCCCceEeceEEECC
Confidence 000112221 236899999 9999999999887 588999999999999999997 699999999876
|
| >3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ... | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-19 Score=183.32 Aligned_cols=177 Identities=21% Similarity=0.267 Sum_probs=128.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|..... .+||||++.+-. .||.+ ++.|.|
T Consensus 35 ~~~~~~~NG~----------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~p-------~~~i~P 93 (488)
T 3od3_A 35 TATTWGYNGN----------LLGPAVKLQRGKAVTVDIYNQLTEE----TTLHWHGLEVPGEVDGGP-------QGIIPP 93 (488)
T ss_dssp EEEEEEESSS----------SBCCEEEEETTCEEEEEEEECSSSC----BCCEEETCCCCHHHHCCT-------TCCBCT
T ss_pred EEEEEEECCc----------CCCCeEEEeCCeEEEEEEEeCCcCc----eeEeecccccCcccCCCC-------cCcCcC
Confidence 4568999998 7889999999999999999998753 348888888754 59964 577999
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC---CCC------C-C-------
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD---SFP------R-G------- 378 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~---~~~------~-~------- 378 (445)
|++++|.|.+++++|+||||+|.. ..++.+..||+-........+..-+.+ .++ . +
T Consensus 94 G~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~ 173 (488)
T 3od3_A 94 GGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLD 173 (488)
T ss_dssp TCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCS
T ss_pred CCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceecccc
Confidence 999999999998789999999973 377777766654322111100000000 000 0 0
Q ss_pred -----------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 379 -----------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 379 -----------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
....|+...+ .+ ..+|++|||||+|++... .|.|+| +||.|+||+.||.++ +|..+|+|.|+|
T Consensus 174 ~~~~~~g~~gd~~lvNG~~~p--~~-~v~g~~~RlRliNas~~~-~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~p 249 (488)
T 3od3_A 174 VMTAAVGWFGDTLLTNGAIYP--QH-AAPRGWLRLRLLNGCNAR-SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 249 (488)
T ss_dssp HHHHHHCCCCSEEEETTBSSC--EE-EEEEEEEEEEEEECCSSC-CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccccccCCCCCEEEEcCCcCc--cE-ecCCCEEEEEEEccCCCc-eeeeeecCCCeEEEEEeCCCcccCccEeceEEECC
Confidence 0011222222 23 347889999999998776 788999 799999999999986 699999999876
|
| >3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.6e-19 Score=182.01 Aligned_cols=173 Identities=16% Similarity=0.176 Sum_probs=128.0
Q ss_pred EEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecCCceE
Q psy16562 248 ILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRV 326 (445)
Q Consensus 248 ~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~ 326 (445)
+++||+. .|+|+|++++|+++++++.|..... .+||||++.+-. .||++. +.|.||+++
T Consensus 28 ~~~Ng~~---------~pGP~i~~~~Gd~v~v~~~N~l~~~----tsiHwHG~~~~~~~DG~~~-------~~i~PG~~~ 87 (448)
T 3aw5_A 28 SGYMAEG---------VLNPTIILRRGQRVDMTLKNKLTEP----TIVHWHGFDVNWHNDAHPS-------FAITPGESY 87 (448)
T ss_dssp TEEEETT---------EESCEEEEETTCEEEEEEEECSSSC----BCEEEETCCCCHHHHTCGG-------GCBCTTCEE
T ss_pred EEECCcc---------ccCceEEEeCCCEEEEEEEECCCCc----eeEEeCCccCCCccCCCCC-------ccCCCCCEE
Confidence 7889972 3568999999999999999999753 348888888754 599654 679999999
Q ss_pred EEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCC-CCCCCCC------CC--------------
Q psy16562 327 DVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKR-PKSDSFP------RG-------------- 378 (445)
Q Consensus 327 dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~-P~~~~~~------~~-------------- 378 (445)
+|.|++++++|+||||+|.. ..++.+..|++-.... .+.... .+...++ .+
T Consensus 88 ~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~ 166 (448)
T 3aw5_A 88 NYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIGGAPVYNPTPMEMIAG 166 (448)
T ss_dssp EEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEETTEEECCCCHHHHHHC
T ss_pred EEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCCCcccccccccccccC
Confidence 99999997789999999942 4778888776544332 000000 0000000 00
Q ss_pred ----CCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEE--eC---eeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 379 ----KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTI--EK---HQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 379 ----~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hi--hg---h~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
....|+.. ...+++++| +|||||+|++... .+.||| ++ |.|+||+.||.+++ |..+|++.|+|
T Consensus 167 ~~~~~~liNG~~--~p~~~v~~g-~~RlRliNa~~~~-~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~p 239 (448)
T 3aw5_A 167 FLGNAVLVNGVK--DAVFKLSGG-SYRLRLVNGSNAR-LYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAP 239 (448)
T ss_dssp CCCSEEEETTEE--TCEEEEEEE-EEEEEEEECSSSC-CEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECT
T ss_pred ccccEEEECCcc--cceEEECCC-eEEEEEEcCCCcc-eEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECC
Confidence 00012221 236899999 9999999999886 688999 99 99999999999999 99999999876
|
| >3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-18 Score=169.22 Aligned_cols=163 Identities=15% Similarity=0.199 Sum_probs=118.4
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecCCceEEEEEecCCC-------
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQS------- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~------- 335 (445)
.|+|+|++++|+++++++.|.... ..+||+|++.+- ..||.+ ++++.|.||+++.|.++++++
T Consensus 33 ~pGP~i~~~~Gd~v~v~~~N~~~~----~~siH~HG~~~~~~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~ 103 (276)
T 3kw8_A 33 VPGPLIEVNEGDTLHIEFTNTMDV----RASLHVHGLDYEISSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGT 103 (276)
T ss_dssp SSCCCEEEETTCEEEEEEEECSSS----CBCCEESSSBCCGGGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSC
T ss_pred ccCCeEEEECCCEEEEEEEECCCC----CccEeecCcccCCccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCc
Confidence 789999999999999999999864 234778877764 469975 467889999999999999762
Q ss_pred -----CceEEEEEEec---------CCCceeeEEEEEcCCCCCCCCCCCCCC--CCCCCCCCCCCCCC-ccceeEeeCCc
Q psy16562 336 -----NNLYWMQAKTL---------CDSITAEAVLQYEGEKLTYVSKRPKSD--SFPRGKPKDNSPRV-PMHFFKVQRDK 398 (445)
Q Consensus 336 -----~G~y~~~~~~~---------~~~~~~~ail~y~~~~~~~~~~~P~~~--~~~~~~~~~~~~~~-~~~~~~v~~G~ 398 (445)
+|+||||+|.. ..++.+..|+.-.+... |+.+ .+.+.. ..|+..+ +...++++.|+
T Consensus 104 ~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~------~drE~~l~l~~~-~iNG~~~~~~p~i~v~~G~ 176 (276)
T 3kw8_A 104 WRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL------PDATHTIVFNDM-TINNRKPHTGPDFEATVGD 176 (276)
T ss_dssp EECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC------CSEEEEEEEETT-EETTCCTTCCCCEEEETTC
T ss_pred cCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc------cccceEEEeccc-ccceecccCCCCEEEecCC
Confidence 58999999872 35677776665443221 1211 111110 1222221 23368999999
Q ss_pred EEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC----CCeEEeEEEecC
Q psy16562 399 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFP 445 (445)
Q Consensus 399 ~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~----~p~~~Dtv~v~p 445 (445)
++||+|+|.+.+.||| |||||.|+|++ +|... .+.++|++.|.|
T Consensus 177 ~vri~l~N~~~~~Hp~--HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~p 224 (276)
T 3kw8_A 177 RVEIVMITHGEYYHTF--HMHGHRWADNR-TGILTGPDDPSRVIDNKITGP 224 (276)
T ss_dssp EEEEEEEEESSCCEEE--EETTCCEESSS-SSSCCSTTCCCCEESEEEECT
T ss_pred EEEEEEecCCCcceeE--EEccceeEEec-cCccCCCcccccCCccEEeCC
Confidence 9999999999888887 99999999975 56432 247999999976
|
| >3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.5e-18 Score=181.11 Aligned_cols=174 Identities=19% Similarity=0.209 Sum_probs=127.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++++.|.+... .+||||++.+-. .||++ +..|.|
T Consensus 56 ~~~~~~~NG~----------~PGPtI~~~~Gd~v~v~v~N~l~~~----tsiHwHGl~~~~~~DG~~-------~~~i~P 114 (534)
T 3abg_A 56 SADLVGYDGM----------SPGPTFQVPRGVETVVRFINNAEAP----NSVHLHGSFSRAAFDGWA-------EDITEP 114 (534)
T ss_dssp CEECBEETSC----------SSEEEEEEETTCCEEEEEEECSSSC----BCEEEETCCCCTTTTTCS-------SSCBSS
T ss_pred ceeEEEECCc----------CcCceEEEeCCcEEEEEEEECCCCC----ceEEECCCcCCCCCCCCC-------CCCCCC
Confidence 4567899998 7899999999999999999999753 358888887754 59963 345899
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCC------CC------------CCCC
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPK------SD------------SFPR 377 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~------~~------------~~~~ 377 (445)
|++++|.|.+++++|+||||+|.. ++++.+..||+-...... .+|. .. .+..
T Consensus 115 G~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~---~lp~~~~~~d~~l~l~d~~~~~~g~~~~ 191 (534)
T 3abg_A 115 GSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDAL---NLPSGYGEFDIPMILTSKQYTANGNLVT 191 (534)
T ss_dssp CSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTS---CTTCCHHHHSCCEEEEEECBCSSSCBCC
T ss_pred CCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCccccc---CCCccCCcceEEEEEeeeeecCCCceec
Confidence 999999999998789999999985 267777766654332211 1111 00 0000
Q ss_pred CCC----------CCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeC-------eeEEEEecCCcc-CCCeEEe
Q psy16562 378 GKP----------KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEK-------HQLQVIASDGTA-VEPLVVD 439 (445)
Q Consensus 378 ~~~----------~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihg-------h~f~Vi~~dG~~-~~p~~~D 439 (445)
... ..|+.. ...+++++ ++|||||+|++... .+.|+|++ |.|+||+.||.. .+|..+|
T Consensus 192 ~~~~~~~~~gd~~lvNG~~--~p~~~v~~-~~~RlRliNa~~~~-~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~ 267 (534)
T 3abg_A 192 TNGELNSFWGDVIHVNGQP--WPFKNVEP-RKYRFRFLDAAVSR-SFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267 (534)
T ss_dssp CTTCSSCCCCSEEEETTEE--SCBCBCCS-SEEEEEEEECCSSC-CEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEES
T ss_pred cCCCCccccCceeccCCcc--CceEEecC-cEEEEEEEecCCcc-eEEEEEecccCcCCCccEEEEEeCCCcccCceEec
Confidence 000 011111 12467877 48999999999887 68899987 999999999984 5699999
Q ss_pred EEEecC
Q psy16562 440 SVTLFP 445 (445)
Q Consensus 440 tv~v~p 445 (445)
+|.|+|
T Consensus 268 ~l~l~p 273 (534)
T 3abg_A 268 LLYISM 273 (534)
T ss_dssp CEEECT
T ss_pred eEEECC
Confidence 998876
|
| >2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-18 Score=174.01 Aligned_cols=180 Identities=11% Similarity=0.048 Sum_probs=122.7
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....++|||+ .|+|+|+++.|++++|++.|......++.+++| ++. ..||... ...|.||
T Consensus 47 ~~~~~~~ng~----------~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~H--G~~--~~dG~~~------~~~i~pg 106 (442)
T 2zoo_A 47 EYVFWSFGET----------VPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLH--AVT--GPGGGAE------SSFTAPG 106 (442)
T ss_dssp EEEEEEETTB----------SSCCBEEEETTCEEEEEEEECTTCSSCBCCEET--TCC--SGGGGGG------GCCBCTT
T ss_pred EEEEEEECCc----------CCCCcEEEeCCCEEEEEEEECCCCCCCCCEEec--CCc--CCCCCCc------cEEECCC
Confidence 4467999998 567899999999999999999753224454444 443 4688543 2359999
Q ss_pred ceEEEEEecCCCCceEEEEEEec------CCCceeeEEEEEcCCCCCCCCCCC----CCC---C----------------
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVLQYEGEKLTYVSKRP----KSD---S---------------- 374 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail~y~~~~~~~~~~~P----~~~---~---------------- 374 (445)
++++|.|++++ +|+||||+|.. ..++.+..+++-...........+ ++. .
T Consensus 107 ~~~~y~f~~~~-~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~~ 185 (442)
T 2zoo_A 107 HTSTFNFKALN-PGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAPVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAID 185 (442)
T ss_dssp CEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEEEEECBSSCTTCCEEECBCHHHHHT
T ss_pred CEEEEEEEcCC-CeEEEEecCCCChHHHHhCccEEEEEEeCCCCCCCCCceEEEEeeeeeccCcccccccccCChhHhcc
Confidence 99999999987 89999999742 366777666553221100000000 000 0
Q ss_pred CCCCCCCCCCCCCcc---ceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 375 FPRGKPKDNSPRVPM---HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 375 ~~~~~~~~~~~~~~~---~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
........|+...+. ..+.++.|+++||||+|++... .+.||||||.|+||+.||.+++|.++|++.|.|
T Consensus 186 ~~~~~~liNG~~~~~~~~~~l~v~~G~~vrlrliN~~~~~-~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~p 258 (442)
T 2zoo_A 186 EDADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNL-VSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPA 258 (442)
T ss_dssp TCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEEEESSC-CEEEEEETCCBSEEEGGGSSCEECSBSEEEECT
T ss_pred CCCCEEEECCCcCCCCCCCceEeCCCCEEEEEEEeCCCCC-ceeeEEcCCEEEEEecCCccCCCccceEEEECC
Confidence 000000123333321 3589999999999999997643 355699999999999999999999999999876
|
| >2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.9e-18 Score=176.47 Aligned_cols=183 Identities=17% Similarity=0.226 Sum_probs=129.8
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCcee------------------EEEEecccceEEEc-
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACP------------------LIFTIEKHQLQVIA- 304 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~------------------~~~~i~gh~~~via- 304 (445)
....+++||+ .|+|+|++++|+++++++.|....... ...+||||++.+-.
T Consensus 45 ~~~~~~~NG~----------~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~~~ 114 (513)
T 2wsd_A 45 PTRLWGYNGL----------FPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDD 114 (513)
T ss_dssp CEEEEEETTB----------SSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCCGG
T ss_pred CceEEEECCC----------ccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCCCc
Confidence 4578999998 788999999999999999999964100 14568999988764
Q ss_pred cCCCcceeeEecEEEecCC---ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC-
Q psy16562 305 SDGTAVEPLVVDSVTLFPG---DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD- 373 (445)
Q Consensus 305 ~DG~~v~P~~~~~~~I~pG---eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~- 373 (445)
.||.+-. .+.+..|.|| ++++|.|.+++++|+||||+|.. +.++.+..||+-...... .+|..+
T Consensus 115 ~DG~p~~--~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~---~lp~~d~ 189 (513)
T 2wsd_A 115 SDGYPEA--WFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL---KLPSDEY 189 (513)
T ss_dssp GSCCTTS--CBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG---CCCCGGG
T ss_pred cCCCCcc--cccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc---cCCCCCC
Confidence 5997642 2345578888 55599999887799999999985 256777766654322110 011100
Q ss_pred ---------------CC--CC--------------------CCCCCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEE
Q psy16562 374 ---------------SF--PR--------------------GKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIF 416 (445)
Q Consensus 374 ---------------~~--~~--------------------~~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~ 416 (445)
.+ .. .....|+... ..++++.+ +|||||+|++... .+.|
T Consensus 190 d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--p~~~v~~~-~~RlRliNa~~~~-~~~~ 265 (513)
T 2wsd_A 190 DVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW--PYLEVEPR-KYRFRVINASNTR-TYNL 265 (513)
T ss_dssp EEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES--CEEECCSS-EEEEEEEECCSSC-CEEE
T ss_pred cEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc--ceEEecCC-EEEEEEEccCCcc-eEEE
Confidence 00 00 0000111111 24778775 8999999999876 6889
Q ss_pred EEeCe-eEEEEecCCccC-CCeEEeEEEecC
Q psy16562 417 TIEKH-QLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 417 hihgh-~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
+|++| .|+||+.||.++ +|..+|++.|+|
T Consensus 266 ~i~~~~~~~via~DG~~~~~P~~~~~l~l~p 296 (513)
T 2wsd_A 266 SLDNGGDFIQIGSDGGLLPRSVKLNSFSLAP 296 (513)
T ss_dssp EETTCCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred EECCCCeEEEEccCCCcccCceEeCeEEECC
Confidence 99999 999999999998 699999999976
|
| >3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-17 Score=177.32 Aligned_cols=177 Identities=17% Similarity=0.184 Sum_probs=121.5
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE---------------------------------
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL--------------------------------- 291 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~--------------------------------- 291 (445)
...+.+||+ .|+|+|++++|+++++++.|.......+
T Consensus 53 t~~~gyNg~----------~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (612)
T 3gyr_A 53 TLMWGYDGQ----------VPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTEPGRGGVEPNKDVA 122 (612)
T ss_dssp EEEEEETTB----------SSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGSCSCTTCCCCHHHH
T ss_pred ceEEEECCc----------ccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCccccccccccccccccccc
Confidence 357899998 8899999999999999999998543221
Q ss_pred ----EEEecccceEEEc-cCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEc
Q psy16562 292 ----IFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYE 359 (445)
Q Consensus 292 ----~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~ 359 (445)
..+||||++.+-. .||+ .++.|.||++|+|.|.++|++|+||||+|.. .+++.+..||+-.
T Consensus 123 ~~~~~ttiHwHGl~~~~~~DGv-------~q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~ 195 (612)
T 3gyr_A 123 ALPAWSVTHLHGAQTGGGNDGW-------ADNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDD 195 (612)
T ss_dssp TCCCCBCEEEETCCCCTTTSCC-------GGGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECH
T ss_pred cCCCCceEEcCCCccCCcccCc-------ccCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCc
Confidence 2357888887643 4884 3677999999999999999889999999963 4777777666533
Q ss_pred CCCCCCCCCCCCCC----CCC-----------------------------CC-----------CCCCCCCCCccceeEee
Q psy16562 360 GEKLTYVSKRPKSD----SFP-----------------------------RG-----------KPKDNSPRVPMHFFKVQ 395 (445)
Q Consensus 360 ~~~~~~~~~~P~~~----~~~-----------------------------~~-----------~~~~~~~~~~~~~~~v~ 395 (445)
.+... .+|..+ .++ .. ....|+... ..+.++
T Consensus 196 ~~~~~---~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~--p~~~v~ 270 (612)
T 3gyr_A 196 EEDAL---GLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW--PYADVD 270 (612)
T ss_dssp HHHTT---TCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES--CEEEEE
T ss_pred ccccc---CCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc--ceEecc
Confidence 22111 011100 000 00 000111111 134554
Q ss_pred CCcEEEEEEEcCCCCccceEEEEeCee-------EEEEecCCccCC-CeEE------eEEEecC
Q psy16562 396 RDKRYLMRIIGGSCLACPLIFTIEKHQ-------LQVIASDGTAVE-PLVV------DSVTLFP 445 (445)
Q Consensus 396 ~G~~~~~rliN~s~~~Hp~~~hihgh~-------f~Vi~~dG~~~~-p~~~------Dtv~v~p 445 (445)
+++|||||||++... .|.|+|.+|. |+||+.||.+++ |+.+ +.|.|+|
T Consensus 271 -~~~yRlRliNas~~~-~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~p 332 (612)
T 3gyr_A 271 -DGWYRLRLVNASNAR-IYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp -SSEEEEEEEECCSSC-CEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred -CcEEEEEEEeccCCc-ceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEecc
Confidence 568999999999887 6899999984 999999998874 5443 4677765
|
| >1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-18 Score=165.06 Aligned_cols=168 Identities=11% Similarity=0.015 Sum_probs=105.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcce----eeEecEEEecCCceEEEEEecCCCC--
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVE----PLVVDSVTLFPGDRVDVIIHTNQSN-- 336 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~~~~-- 336 (445)
.++|+|++++|+++++||+|.+.. .++||+|++.+. +.||.+.. +....++.|.|||+++|.|++++++
T Consensus 57 ~pGP~I~v~~Gd~v~v~~~N~l~~----~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp 132 (306)
T 1sdd_A 57 LLGPTLYAEVGDIMKVHFKNKAHK----PLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGP 132 (306)
T ss_dssp SCCCCEEEETTCEEEEEEEECSSS----CBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSC
T ss_pred ccCCEEEEeCCCEEEEEEEECCCC----cccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCC
Confidence 446899999999999999998864 345888888864 57998753 2233468999999999999998753
Q ss_pred -------ceEEEEEEec-----CCCceeeEEEEEcCCCCCCC-CCCC--CCCCCCC----CC---------CCCCCCCCc
Q psy16562 337 -------NLYWMQAKTL-----CDSITAEAVLQYEGEKLTYV-SKRP--KSDSFPR----GK---------PKDNSPRVP 388 (445)
Q Consensus 337 -------G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~~-~~~P--~~~~~~~----~~---------~~~~~~~~~ 388 (445)
|+||||+|.. ..++.+..|+.-.+...... .... +...+.. .. -..|+....
T Consensus 133 ~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~~~~~~~~~~~ING~~~~ 212 (306)
T 1sdd_A 133 THDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKSWNQTSSLMYTVNGYVNG 212 (306)
T ss_dssp CSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSSSSCCCCEEECSSSCCSS
T ss_pred CCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccccccCCCcceeeCCEecC
Confidence 6999999965 36677765554333211110 0001 1111111 00 113333321
Q ss_pred -cceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 -MHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 -~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++++.|+++||||+|++.. .|+| |||||.|++ || ..+|++.|.|
T Consensus 213 ~~p~l~v~~G~~vrlrliN~g~~~~~h~~--hlhG~~~~~---dG-----~~~dtv~l~p 262 (306)
T 1sdd_A 213 TMPDITVCAHDHISWHLIGMSSGPELFSI--HFNGQVLEQ---NH-----HKISAITLVS 262 (306)
T ss_dssp CCCCCCCCCC------BBCCCSSSCEECC--BCSSTTCEE---TT-----EECSCCCEET
T ss_pred CCcceEEcCCCEEEEEEEeCCCCCccEEE--EECCcEeee---CC-----EEcceEEECC
Confidence 2357899999999999999875 4555 999999986 66 3466666654
|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.2e-17 Score=176.08 Aligned_cols=171 Identities=9% Similarity=0.062 Sum_probs=110.0
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEE-EccCCCcce---e-eEecEEEecCCceEEEEEecCCC---
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV-IASDGTAVE---P-LVVDSVTLFPGDRVDVIIHTNQS--- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v-ia~DG~~v~---P-~~~~~~~I~pGeR~dv~v~~~~~--- 335 (445)
.|+|+|++++|+++++||.|.+... .+||+|++.+ .+.||.+.. | ..+.++.|.||++++|.|++++.
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~~~----~siH~HGl~~~~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp 141 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLASRP----YSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGP 141 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSSSC----BCCEEETCC---------------------CCBCTTCCEECCEECCTTTSC
T ss_pred CcCceEEEeCCCEEEEEEEECCCCc----eEEecCcceeCCCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCC
Confidence 7789999999999999999999753 4588888887 567997642 1 23458899999999999999884
Q ss_pred --Cc----eEEEEEEec-----CCCceeeEEEEEcCCCCC---CCCCCCCCCCCCC-------------C----------
Q psy16562 336 --NN----LYWMQAKTL-----CDSITAEAVLQYEGEKLT---YVSKRPKSDSFPR-------------G---------- 378 (445)
Q Consensus 336 --~G----~y~~~~~~~-----~~~~~~~ail~y~~~~~~---~~~~~P~~~~~~~-------------~---------- 378 (445)
+| +||||+|.. ..++.+..|+...+.... .+....+...++. .
T Consensus 142 ~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~ 221 (647)
T 1sdd_B 142 ENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRASSE 221 (647)
T ss_dssp CSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-------------
T ss_pred CCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccCCcc
Confidence 47 999999984 477877766665433211 0000000000000 0
Q ss_pred ------CCCCCCCCCccceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 379 ------KPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 379 ------~~~~~~~~~~~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
....|+...+...+++++|+++||||+|++.. .|+| |||||.|+|++.|| ..+|++.|.|
T Consensus 222 ~~~~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~--hlhG~~f~vi~~d~-----~~~d~v~l~p 289 (647)
T 1sdd_B 222 VKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVV--HFHGQTLLENGTQQ-----HQLGVWPLLP 289 (647)
T ss_dssp --CCCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEE--EETTCCEEECSSSC-----EEESSEEECT
T ss_pred hhhcCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeE--EEcCcEEEEecCCC-----cccceEEECC
Confidence 00122332233468999999999999999864 5655 99999999998875 4677777765
|
| >2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ... | Back alignment and structure |
|---|
Probab=99.67 E-value=3.4e-16 Score=156.13 Aligned_cols=179 Identities=14% Similarity=0.108 Sum_probs=116.0
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecC
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~p 322 (445)
.....+++||+ .|+|+|++++|+++++|++|.+...+.+.+++|++.. +.||.++ + .|.|
T Consensus 57 ~~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~-----~--~i~P 116 (340)
T 2bw4_A 57 TEIHAMTFNGS----------VPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGAL-----T--QVNP 116 (340)
T ss_dssp CEEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCT
T ss_pred cEEEEEEECCC----------CCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccc-----e--EeCC
Confidence 34578999998 6679999999999999999998432233333333221 1233222 2 3999
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCC----CCCC---CC----CCC------C-CCC-
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKL----TYVS---KR----PKS------D-SFP- 376 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~----~~~~---~~----P~~------~-~~~- 376 (445)
||+++|.|++++ +|+||||+|.. ..++.+..+++-..... .+.. .. .++ + .+.
T Consensus 117 G~~~~y~~~~~~-~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~~ 195 (340)
T 2bw4_A 117 GEETTLRFKATK-PGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKK 195 (340)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBCC
T ss_pred CCEEEEEEECCC-CeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCcccc
Confidence 999999999987 89999999963 36777765554332100 0000 00 000 0 000
Q ss_pred ----------------C---CCCCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCC
Q psy16562 377 ----------------R---GKPKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE 434 (445)
Q Consensus 377 ----------------~---~~~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~ 434 (445)
. ..-..|+.... ...+++++|+++||++.|.+...|++ |+|+|.|+|++ ||.++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~--~i~gh~~~Vi~-dG~~~~ 272 (340)
T 2bw4_A 196 YETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPH--LIGGHGDYVWA-TGKFRN 272 (340)
T ss_dssp CCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEE--EETCCEEEEET-TCCTTS
T ss_pred cccccccccchhhHhhcCCCCEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceE--EecCcceEEeC-CCcccC
Confidence 0 00012333221 24689999999999888887777665 79999999997 888876
Q ss_pred C--eEEeEEEecC
Q psy16562 435 P--LVVDSVTLFP 445 (445)
Q Consensus 435 p--~~~Dtv~v~p 445 (445)
+ .++|+|.|.|
T Consensus 273 ~p~~~~dtv~l~p 285 (340)
T 2bw4_A 273 PPDLDQETWLIPG 285 (340)
T ss_dssp CCEEEESCCCBCT
T ss_pred CccccceEEEeCC
Confidence 4 3679988865
|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
Probab=99.65 E-value=5.7e-16 Score=154.07 Aligned_cols=177 Identities=12% Similarity=0.066 Sum_probs=117.3
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCc-ceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTA-VEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~-v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++|+++++|+.|.+.. +|+|++.+-+.+|.. ..+ ++ .|.|
T Consensus 51 ~~~~~~~ng~----------~pgP~i~~~~Gd~v~v~~~N~~~~-------~h~Hg~~~~~~~~~~~~~~--~~--~i~P 109 (333)
T 1mzy_A 51 YLQAMTFDGS----------IPGPLMIVHEGDYVELTLINPPEN-------TMPHNIDFHAATGALGGGG--LT--LINP 109 (333)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTC-------CSCBCCEETTSCSGGGGGG--GC--CBCT
T ss_pred EEEEEEECCc----------cCCCcEEecCCCEEEEEEEECCCC-------cccccceecCCCCCCCCCc--ee--EeCC
Confidence 4568899998 677999999999999999999632 677887765543321 111 22 3999
Q ss_pred CceEEEEEecCCCCceEEEEEEec--------CCCceeeEEEEEcCCCCCCCCCCCCCC------------------CCC
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL--------CDSITAEAVLQYEGEKLTYVSKRPKSD------------------SFP 376 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~--------~~~~~~~ail~y~~~~~~~~~~~P~~~------------------~~~ 376 (445)
|++++|.|++++ +|+||||+|.. ..++.+..|+.-......+......++ .+.
T Consensus 110 G~~~~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~ 188 (333)
T 1mzy_A 110 GEKVVLRFKATR-AGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYM 188 (333)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBC
T ss_pred CCEEEEEEECCC-CEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCcccccccc
Confidence 999999999987 89999999862 367777766653321100000000000 000
Q ss_pred ----------------CC-C---CCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccC
Q psy16562 377 ----------------RG-K---PKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV 433 (445)
Q Consensus 377 ----------------~~-~---~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~ 433 (445)
.. . -..|+...+ ...+++++|+++||+++|.+...+++ +||+|.|+|++ ||.++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~ING~~~~~~~~~~l~v~~Ger~Rl~n~~~~~~~~~h--~i~~h~~~Vi~-dG~~~ 265 (333)
T 1mzy_A 189 RFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRDSRPH--LIGGHGDLVWE-TGKFH 265 (333)
T ss_dssp CCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEE--EETCCEEEEET-TCCTT
T ss_pred ccccccccccchhHHhhccCCcEEEECCcccccCCCcceEecCCCEEEEEECCCCCccccE--EECCCCeEEEe-CCccc
Confidence 00 0 012333221 23589999999988888876655433 57899999999 99998
Q ss_pred CC-e-EEeEEEecC
Q psy16562 434 EP-L-VVDSVTLFP 445 (445)
Q Consensus 434 ~p-~-~~Dtv~v~p 445 (445)
++ . ++|++.|.|
T Consensus 266 ~~p~~~~dtv~l~p 279 (333)
T 1mzy_A 266 NAPERDLETWFIRG 279 (333)
T ss_dssp SCCEEEESBCCBCT
T ss_pred CCCccCcceEEECC
Confidence 74 3 689998875
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-16 Score=131.37 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=72.3
Q ss_pred CCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCC--CCCCCCCcccccCCCCCCceEEEEec-CCCcceEEec
Q psy16562 105 RQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT--PWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHS 181 (445)
Q Consensus 105 g~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~--~~~DGvp~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~ 181 (445)
-+|++|+|++++||+|+ +.|.+. .++++||||..++.. ..+||.+ .+++.|.||++++|.|.+ .++|+|||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~-~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKL-PPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSS-CCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred cEEeCCEEEEcCCCEEE--EEECCC-CCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 36889999999999975 679976 789999999876431 0133332 356789999999999999 5999999999
Q ss_pred ccchhhhcCceeEEEEeC
Q psy16562 182 HVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 182 H~~~q~~~Gl~G~lIV~~ 199 (445)
| .|...||.|.|+|++
T Consensus 90 ~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 90 A--PHRGAGMVGKITVEG 105 (105)
T ss_dssp T--TTGGGTCEEEEEECC
T ss_pred C--CchhcCCEEEEEEcC
Confidence 9 577889999999964
|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
Probab=99.62 E-value=2.7e-15 Score=149.28 Aligned_cols=178 Identities=12% Similarity=0.109 Sum_probs=115.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|++++|+++++|+.|.+...+.+.+++|++.. +.||..+ + .|.||
T Consensus 52 ~~~~~~~ng~----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~-----~--~i~pG 111 (336)
T 1oe1_A 52 TLQAMTFNGS----------MPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKL-----T--NVNPG 111 (336)
T ss_dssp EEEEEEETTB----------SSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGG-----C--CBCTT
T ss_pred EEEEEEECCc----------cCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcce-----E--EeCCC
Confidence 4578999998 6789999999999999999997543455666666542 2233222 2 39999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEEcCCCCCCCCCCCCCC------------------CC---
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQYEGEKLTYVSKRPKSD------------------SF--- 375 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y~~~~~~~~~~~P~~~------------------~~--- 375 (445)
++++|.|++++ +|+||||+|.. ..++.+..|++.......+......++ .+
T Consensus 112 ~~~~y~f~~~~-~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~~~~ 190 (336)
T 1oe1_A 112 EQATLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKYKDY 190 (336)
T ss_dssp EEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSBCCC
T ss_pred CEEEEEEECCC-CeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCceeec
Confidence 99999999987 89999999963 367777767664332110000000000 00
Q ss_pred CC-----------------CCCCCCCCCCc---cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCC
Q psy16562 376 PR-----------------GKPKDNSPRVP---MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP 435 (445)
Q Consensus 376 ~~-----------------~~~~~~~~~~~---~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p 435 (445)
.. .....|+.... ...+++++|+++||+..+.+...++ ++||+|.|+|++ ||.+++|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~~~~~l~v~~GervRlin~~~~~~~~~--~~i~gh~~~Vi~-DG~~~~p 267 (336)
T 1oe1_A 191 ATLAESYGDTVQVMRTLTPSHIVFNGKVGALTGANALTAKVGETVLLIHSQANRDTRP--HLIGGHGDWVWE-TGKFANP 267 (336)
T ss_dssp SSTGGGHHHHHHHHHTTCCSEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCE--EETTCCEEEEET-TCCTTSC
T ss_pred ccccccccchhhHhhcCCCCEEEECCeeccCCCCcceEcCCCCEEEEEecCCCCccce--EEECCcCceEeC-CCcCcCC
Confidence 00 00012222221 2468999999887755554444433 256999999997 9999886
Q ss_pred e--EEeEEEecC
Q psy16562 436 L--VVDSVTLFP 445 (445)
Q Consensus 436 ~--~~Dtv~v~p 445 (445)
. ++|++.|.|
T Consensus 268 ~~~~~dtv~i~p 279 (336)
T 1oe1_A 268 PQRDLETWFIRG 279 (336)
T ss_dssp CEEEESBCCBCT
T ss_pred ccccceEEEECC
Confidence 3 468888765
|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
Probab=99.56 E-value=8.4e-16 Score=167.86 Aligned_cols=167 Identities=7% Similarity=0.061 Sum_probs=115.2
Q ss_pred CcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc--CCCcceeeEecEEEecCCceEEEEEecCC------
Q psy16562 263 RVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS--DGTAVEPLVVDSVTLFPGDRVDVIIHTNQ------ 334 (445)
Q Consensus 263 ~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~--DG~~v~P~~~~~~~I~pGeR~dv~v~~~~------ 334 (445)
..|+|+|+++.|++++++|.|.+... .+||+|++.+-.. ||++- .++.|.||++++|.+++++
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~----~siH~HG~~~~~~~~dG~~~-----~~~~I~PG~~~tY~f~~~~~~gp~~ 265 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRP----YSFYSSLISYEEDQRQGAEP-----RKNFVKPNETKTYFWKVQHHMAPTK 265 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSC----CCCCBTTCCCCCCSSSCTTT-----TSSCCCSSCEEEEECCCCSSSSCCS
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCC----cceeecccccccccCCCCcC-----ccCccCCCCeEEEEEEecCccCCcc
Confidence 37889999999999999999998652 3588888776532 48642 4678999999999999985
Q ss_pred ---CCceEEEEEEec-----CCCceeeEEEEEcCCCCCC---CCCCCCCCCC----------------------CC----
Q psy16562 335 ---SNNLYWMQAKTL-----CDSITAEAVLQYEGEKLTY---VSKRPKSDSF----------------------PR---- 377 (445)
Q Consensus 335 ---~~G~y~~~~~~~-----~~~~~~~ail~y~~~~~~~---~~~~P~~~~~----------------------~~---- 377 (445)
++|+||||+|.. ..++.+..|+.-.+..... ....-++..+ +.
T Consensus 266 ~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~ 345 (770)
T 2r7e_B 266 DEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQM 345 (770)
T ss_dssp SCCSEEEEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCS
T ss_pred CCCCCeeEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCcccccc
Confidence 579999999986 2667776665543321100 0000000000 00
Q ss_pred ---------CCCCCCCCCC-ccceeEeeCCcEEEEEEEcCCCC--ccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 378 ---------GKPKDNSPRV-PMHFFKVQRDKRYLMRIIGGSCL--ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 378 ---------~~~~~~~~~~-~~~~~~v~~G~~~~~rliN~s~~--~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
..-..|+... ....++++.|+++||||+|++.+ .||| |||||.|+|++.||. ++|||.|.|
T Consensus 346 ~d~~~~~~~~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~f--HlhGh~f~Vv~~dg~-----~~Dtv~l~P 418 (770)
T 2r7e_B 346 EDPTFKENYRFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSI--HFSGHVFTVRKKEEY-----KMALYNLYP 418 (770)
T ss_dssp SSSSSTTTSCEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEE--EBSSCCEECCSSSCC-----EESEEECCT
T ss_pred CCccccccCCccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEE--EEcCCEEEEEecCCc-----eeeEEEECC
Confidence 0001222222 12357899999999999999764 6776 999999999999873 888988876
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.7e-14 Score=124.55 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=72.1
Q ss_pred EEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCC------CCcc-cccCCCCCC--ceEEEEe
Q psy16562 100 ILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG------VPMV-TQCPIPSST--TFRYKFP 170 (445)
Q Consensus 100 ~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DG------vp~~-tq~pI~pG~--~~~Y~f~ 170 (445)
-..++|. ++|+|+|++||+|++++.|... ...|++.+.+.++++.+. .++. ....|.||+ +++|.|+
T Consensus 52 ~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft 127 (154)
T 2cal_A 52 SFEVHDK-KNPTLEIPAGATVDVTFINTNK---GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWH 127 (154)
T ss_dssp CEEETTE-ESCEEEECTTCEEEEEEEECCT---TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEEC
T ss_pred cccccCC-CCCEEEEeCCCEEEEEEEcCCC---CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEE
Confidence 3455665 6899999999999999999732 456777777655544321 0010 001689999 9999999
Q ss_pred cCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 171 AMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 171 ~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+ ++||||||||...|..+||+|.|+|+
T Consensus 128 ~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 128 P-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp C-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred E-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9 99999999999889999999999984
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=99.40 E-value=8.3e-13 Score=110.12 Aligned_cols=92 Identities=23% Similarity=0.224 Sum_probs=73.5
Q ss_pred CCCeEEEE-EEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec
Q psy16562 93 ADGFERAI-LSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 93 ~dG~~~~~-~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~ 171 (445)
.+|..... ..+|++|++|.|++++||+|++++.|... . +||+.... .|. +..+.||++++|.|++
T Consensus 20 ~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~-~-----~H~~~i~~----~~~----~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 20 VEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-I-----SEGFSIDA----FGV----QEVIKAGETKTISFTA 85 (112)
T ss_dssp ETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-S-----CEEEEEGG----GTE----EEEECTTCEEEEEEEC
T ss_pred eccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCC-C-----eEEEEEcC----CCc----eeEeCCCCEEEEEEEC
Confidence 45665555 58999999999999999999999999975 2 67776543 132 4579999999999999
Q ss_pred CCCcceEEecccchhhhcCceeEEEEeC
Q psy16562 172 MPSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 172 ~~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
.++|+||||||...+.. +|.|.|+|.+
T Consensus 86 ~~~G~y~~~C~~~~~~~-~M~g~i~V~~ 112 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNI-HLPGTLNVVE 112 (112)
T ss_dssp CSCEEEEEBCSSSCTTT-BCCEEEEEEC
T ss_pred CCCEEEEEECCCCCchH-HCEEEEEEeC
Confidence 99999999998654433 3999999964
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-12 Score=135.42 Aligned_cols=94 Identities=22% Similarity=0.273 Sum_probs=76.7
Q ss_pred CCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC
Q psy16562 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 173 (445)
Q Consensus 94 dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~ 173 (445)
++++..+|++|++||+|+|+|++||+|++.++|.+..... +||+.... .|+ ++.|.||++++|.|++.+
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv---~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL---THGFTMGN----YGV----AMEIGPQMTSSVTFVAAN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC---CEEEEETT----TTE----EEEECTTCEEEEEEECCS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc---eeeEEecC----CCc----ceeeCCCCeEEEEEECCC
Confidence 5678899999999999999999999999999998652111 47776543 232 247999999999999999
Q ss_pred CcceEEeccc---chhhhcCceeEEEEeCC
Q psy16562 174 SGTFFYHSHV---GLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 174 ~GT~wYH~H~---~~q~~~Gl~G~lIV~~~ 200 (445)
+|+||||||. ..|. ||+|.|+|+++
T Consensus 566 pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999993 2443 99999999865
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=96.18 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=64.7
Q ss_pred ECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc
Q psy16562 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 182 (445)
Q Consensus 103 ~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H 182 (445)
-+..|-.+.|+|++||+|+ +.|... .++++|+++. +||.....+..|.||++++|.| .++|+|||||+
T Consensus 26 ~~~~F~P~~i~v~~Gd~V~--~~N~d~-~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C~ 93 (105)
T 2ov0_A 26 AKMKYETPELHVKVGDTVT--WINREA-MPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCT 93 (105)
T ss_dssp ETTEESSSEEEECTTCEEE--EEECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred eecEEcCCEEEECCCCEEE--EEECCC-CCEEEEEcCC-------CCCcccccccccCCCCEEEEEe--CCCEEEEEEeC
Confidence 4667888999999999965 568876 6888888852 3666655666799999999988 68999999998
Q ss_pred cchhhhcCceeEEEEe
Q psy16562 183 VGLQKMDGLEGSMIIR 198 (445)
Q Consensus 183 ~~~q~~~Gl~G~lIV~ 198 (445)
... ||.|.|+|+
T Consensus 94 ~H~----gM~G~i~V~ 105 (105)
T 2ov0_A 94 PHP----FMRGKVVVE 105 (105)
T ss_dssp SCT----TCEEEEEEC
T ss_pred CCC----CCEEEEEEC
Confidence 632 999999984
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=99.00 E-value=7.6e-10 Score=90.87 Aligned_cols=82 Identities=15% Similarity=0.274 Sum_probs=61.3
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCC----cccccCCCCCCceEEEEec-CCCcceEEeccc
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP----MVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHV 183 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp----~~tq~pI~pG~~~~Y~f~~-~~~GT~wYH~H~ 183 (445)
-+.|++++||+|++ .|... .++++|.|+...+. .+|.. ..+.-.+.||++++|.|++ .++|+||||||
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~-~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~- 91 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKV-PPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE- 91 (106)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-
T ss_pred CCEEEECCCCEEEE--EECCC-CCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-
Confidence 37999999998754 58764 57888888754321 22320 0122358999999999988 69999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|.
T Consensus 92 -~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 92 -PHRGAGMVGKITVA 105 (106)
T ss_dssp -TTGGGTCEEEEEEC
T ss_pred -ChhhcCcEEEEEEc
Confidence 67778999999996
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=98.88 E-value=7.4e-09 Score=89.44 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCC-CceEeeCCccc--------C----C--CCC-CCCCCc--ccccCCCCCCceEE
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDR-EVTLHWHGVYQ--------K----V--TPW-MDGVPM--VTQCPIPSSTTFRY 167 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~-~tsiHwHG~~~--------~----~--~~~-~DGvp~--~tq~pI~pG~~~~Y 167 (445)
.|--+.|+|++||+|+++|+|... . +++++.|+... . + ..+ -++.+. ...-.|.||+++++
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~-~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v 109 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSA-VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEV 109 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCS-SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCC-CCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEE
Confidence 455579999999999999999865 5 67777776321 0 0 000 001010 01124899999999
Q ss_pred EEecCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 168 KFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 168 ~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.|+++++|+|+||||...|.. ||.|.|+|+
T Consensus 110 ~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 110 TFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 999999999999999887888 999999984
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.8e-08 Score=81.90 Aligned_cols=85 Identities=14% Similarity=0.156 Sum_probs=65.4
Q ss_pred EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcce
Q psy16562 98 RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTF 177 (445)
Q Consensus 98 ~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~ 177 (445)
..+-.-|..|=-..|+++.||+|++.+.|... ..+++...+.... -.+.||++.+|.|++.++|+|
T Consensus 16 v~V~~~~~~F~P~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~~~~G~Y 81 (100)
T 4hci_A 16 IEVELNDDYFNPNVITIPINESTTLLLKNKGK-SEHTFTIKKLGID-------------VVVESGKEKNITVKPKSAGTY 81 (100)
T ss_dssp EEEEEETTEEESSEEEECTTSCEEEEEEECSS-SCEEEEEGGGTEE-------------EEECTTCEEEEEECCCSCEEE
T ss_pred EEEEEECCEEeCCEEEECCCCEEEEEEEcCCC-ceEEEEEecCCcc-------------eeecCCcceeEEEecccCceE
Confidence 34444466665568999999999999999865 4555554443211 147899999999999999999
Q ss_pred EEecccchhhhcCceeEEEEe
Q psy16562 178 FYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 178 wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.|+|. .|...||.|.|||+
T Consensus 82 ~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 82 ELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEECc--cccCCCCEEEEEEC
Confidence 99996 46678999999995
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.7e-08 Score=81.41 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=58.5
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCC-CcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV-PMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGv-p~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
+.|++++||+|+ +.|... .++++|+|+...+. ..|.. ...+.-.+.||+++++.|. ++|+|+|||+ .|..
T Consensus 18 ~~i~v~~G~~V~--~~n~~~-~~H~~~~~~~~~p~--~~~~~~~~~~~~~~~pG~~~~~tf~--~~G~y~y~C~--~H~~ 88 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAG-FPHNIVFDEDAIPS--GVNADAISRDDYLNAPGETYSVKLT--AAGEYGYYCE--PHQG 88 (98)
T ss_dssp SEEEECTTCEEE--EEECSS-CCEEEEECGGGSCT--TCCHHHHCEEEEECSTTCEEEEECC--SCEEEEEECG--GGGG
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCCCC--ccccccccccceecCCCCEEEEEeC--CCeEEEEEcC--Cccc
Confidence 689999999876 578864 68999999864321 11100 0011225899999999875 8999999999 5777
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 2plt_A 89 AGMVGKIIVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 7999999984
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=98.66 E-value=2.5e-07 Score=79.81 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCCEEEEEEEe--cCCCCCceEeeCCc------------ccC----CCCCCCCCCcc-cccCCCCCCceE
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKN--HMIDREVTLHWHGV------------YQK----VTPWMDGVPMV-TQCPIPSSTTFR 166 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N--~l~~~~tsiHwHG~------------~~~----~~~~~DGvp~~-tq~pI~pG~~~~ 166 (445)
+|--+.|+|+.||+|++++.| ... ..++++.++. ... ..+..|....+ .--.|.||++.+
T Consensus 29 ~F~P~~i~v~~G~tV~~~~~N~~~~~-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~ 107 (140)
T 1qhq_A 29 AFAQTSLSLPANTVVRLDFVNQNNLG-VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGS 107 (140)
T ss_dssp SBSCSEEEEETTCEEEEEEEECCSSC-CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEE
T ss_pred eEeCCeEEECCCCEEEEEEECCCCCC-CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeE
Confidence 455579999999999999999 544 5666666631 000 00000100000 012579999999
Q ss_pred EEEecCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 167 YKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 167 Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+.|++..+|+|||||+...|...||.|.|+|.
T Consensus 108 ~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 108 VTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 99999999999999998888888999999996
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=98.65 E-value=7.1e-08 Score=76.53 Aligned_cols=74 Identities=19% Similarity=0.323 Sum_probs=55.5
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+++.||+|++ .|... .++++|.++.. ++. .....+.||+++++.| .++|+|||||+ .+..
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~-~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~ 81 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKL-APHNVVVEGQP----ELS-----HKDLAFSPGETFEATF--SEPGTYTYYCE--PHRG 81 (91)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe--CCCEEEEEEeC--CCcc
Confidence 46899999999864 57654 57888887621 010 1223589999988877 78999999999 5666
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 82 ~gM~g~i~V~ 91 (91)
T 1bxv_A 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 7999999984
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=98.64 E-value=7.9e-08 Score=77.54 Aligned_cols=81 Identities=11% Similarity=0.222 Sum_probs=57.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|++++||+|++ .|... .++++|.++...++. .+++.. .....+.||+++++.| .++|+|+|||+ .|..
T Consensus 18 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~pg~-~~~~~~-~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~ 88 (98)
T 1pcs_A 18 PSTVTIKAGEEVKW--VNNKL-SPHNIVFDADGVPAD-TAAKLS-HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRG 88 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECCSSSCHH-HHHHHC-EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTT
T ss_pred CCEEEECCCCEEEE--EECCC-CCcEEEEeCCCCCcc-cccccc-ccccccCCCCEEEEEc--CCCeEEEEEcC--Cccc
Confidence 36899999998764 57754 578888876432100 000000 1123589999999988 68999999999 6777
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~gM~G~i~V~ 98 (98)
T 1pcs_A 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred cCCeEEEEEC
Confidence 8999999984
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=98.61 E-value=1.2e-07 Score=79.97 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=52.9
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|+|++||+|++.+.| . + |++......+-+|.... -+.||++++|.| .++|+|||+|. .|...
T Consensus 21 ~~i~V~~GdtV~f~~~~--~--~-----H~v~~~~~~~P~g~~~f---~~~pg~t~s~TF--~~pG~y~y~C~--~H~~~ 84 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD--K--S-----HNVEAIKEILPEGVESF---KSKINESYTLTV--TEPGLYGVKCT--PHFGM 84 (123)
T ss_dssp SEEEECTTEEEEEEESS--T--T-----CCCEECTTSSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEECG--GGTTT
T ss_pred CEEEECCCCEEEEEECC--C--C-----ceEEEcCCcCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--CCCcC
Confidence 68999999997776665 2 2 33332211122343111 357899998888 58999999998 67778
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.++
T Consensus 85 GM~G~I~V~~~ 95 (123)
T 3erx_A 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 99999999863
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=80.52 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=52.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|.+.+.|. + |++.......-+|.... -+.||++++|.| ..+|+|||||. .|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~----~-----H~v~~~~~~~P~g~~~f---~s~pGet~s~TF--~~pG~y~y~C~--~H~~ 85 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK----G-----HNSALMKGGAPEGAETW---KGKINEEITVTL--SKPGVYMYQCA--PHVG 85 (127)
T ss_dssp SSEEEECTTCEEEEECSSS----S-----CCCEECTTCSCTTCCCC---BCCTTCCCEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEEEEECCC----C-----ceEEEccCcCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--CCCc
Confidence 3799999999976555442 2 44432211112332111 357999988888 68999999998 4677
Q ss_pred cCceeEEEEeCCC
Q psy16562 189 DGLEGSMIIRTPK 201 (445)
Q Consensus 189 ~Gl~G~lIV~~~~ 201 (445)
.||.|.|+|.++.
T Consensus 86 ~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 86 MGMIGAIVVGEPA 98 (127)
T ss_dssp GTCEEEEEESSCT
T ss_pred CCcEEEEEECcCC
Confidence 8999999998763
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.2e-07 Score=76.24 Aligned_cols=77 Identities=14% Similarity=0.330 Sum_probs=54.9
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc--cccCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV--TQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~--tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
+.|++++||+| ++.|... .+++++.++... .+|...+ ..-.+.||+++++.| .++|+|+|||+ .|.
T Consensus 19 ~~i~v~~G~~V--~~~n~~~-~~H~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~ 86 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKV-GPHNVIFDKVPA-----GESAPALSNTKLAIAPGSFYSVTL--GTPGTYSFYCT--PHR 86 (97)
T ss_dssp SEEEECTTCEE--EEEECSS-CCCCBEEEECCT-----TSCHHHHCBCCCCCSCSCCEEEEC--CSCSEEEEECS--STT
T ss_pred CEEEECCCCEE--EEEECCC-CCeEEEEeCCCC-----ccccccccccceecCCCCEEEEEe--CCCeEEEEEcc--Chh
Confidence 68999999986 5568653 466666665432 1121110 112578999999887 78999999999 666
Q ss_pred hcCceeEEEEe
Q psy16562 188 MDGLEGSMIIR 198 (445)
Q Consensus 188 ~~Gl~G~lIV~ 198 (445)
..||.|.|+|+
T Consensus 87 ~~gM~G~i~V~ 97 (97)
T 1b3i_A 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred hcCCEEEEEEC
Confidence 77999999984
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.8e-07 Score=74.82 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=54.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCC-----CCCCCcc--cccCCCCCCceEEEEecCCCcceEEec
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW-----MDGVPMV--TQCPIPSSTTFRYKFPAMPSGTFFYHS 181 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~-----~DGvp~~--tq~pI~pG~~~~Y~f~~~~~GT~wYH~ 181 (445)
-+.|+|++||+|+ +.|... .+++++.+.- .... ++..+.+ +.-.+.||+++++.| .++|+|+|||
T Consensus 16 P~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~~G~y~y~C 87 (102)
T 1kdj_A 16 PDSITVSAGEAVE--FTLVGE-TGHNIVFDIP---AGAPGTVASELKAASMDENDLLSEDEPSFKAKV--STPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSS-SCBCCEECCC---TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCC-CCeEEEEeCc---ccccccccchhhcccccccceecCCCCEEEEEe--CCCeEEEEEe
Confidence 3689999999976 568754 4666666621 0000 0000111 122478999988877 7899999999
Q ss_pred ccchhhhcCceeEEEEe
Q psy16562 182 HVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 182 H~~~q~~~Gl~G~lIV~ 198 (445)
+ .|...||.|.|+|+
T Consensus 88 ~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 88 T--PHKSANMKGTLTVK 102 (102)
T ss_dssp S--TTGGGTCEEEEEEC
T ss_pred C--CCcccCCeEEEEEC
Confidence 9 77778999999984
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=98.48 E-value=5.4e-07 Score=76.04 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=53.0
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|+|++||+|. ++|.. .++++..+... .-+|... --+.||++|+|.| +.+|+|+|||- .|...
T Consensus 22 ~~i~V~~GDTV~--f~n~~--~~Hnv~~~~~~-----~p~g~~~---~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~~ 85 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD--KSHNAESVREV-----WPEGVAP---VKGGFSKEVVFNA--EKEGLYVLKCA--PHYGM 85 (124)
T ss_dssp SEEEECTTCEEE--EECSS--SSCCCEECTTT-----SCTTSCC---CBCCTTCCEEEEC--CSSEEEEEECT--TTGGG
T ss_pred CEEEECCCCEEE--EEECC--CCccEEEeCCc-----CCCCccc---cccCCCCEEEEEe--CCCeEEEEEcC--CCCcC
Confidence 699999999975 55553 24455444211 1233221 1367999988888 58999999995 67778
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.+|
T Consensus 86 GM~G~I~V~~p 96 (124)
T 3ef4_A 86 GMVVLVQVGKP 96 (124)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEECCC
Confidence 99999999875
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=98.48 E-value=5.1e-07 Score=72.86 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=56.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc------ccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~------~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+.|++++||+|+ +.|... .++++|.++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~~~~~~~~~-----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~~G~y~~~C~- 85 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAG-FPHNDLFDKKEV-----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--EKGTYKFYCA- 85 (99)
T ss_dssp SEEEECTTEEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CcceEEEeCCCC-----ccccccccccccccceeeCCCCEEEEEeC--CCcEEEEEcC-
Confidence 589999999864 578864 577788776432 122210 01124789999999885 8999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 86 -PHAGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CccccCCEEEEEEC
Confidence 67777999999984
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=98.45 E-value=6.2e-07 Score=72.39 Aligned_cols=77 Identities=14% Similarity=0.229 Sum_probs=55.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc------ccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~------~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+.|++++||+|+ +.|... .+++++.++... .+|... ...-.+.||+++++.|. ++|+|+|||+
T Consensus 17 ~~i~v~~G~tV~--~~n~~~-~~H~v~~~~~~~-----p~~~~~~~~~~~~~~~~~~~G~~~~~tf~--~~G~y~~~C~- 85 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAG-FPHNIVFDEDSI-----PSGVDASKISMSEEDLLNAKGETFEVALS--NKGEYSFYCS- 85 (99)
T ss_dssp SEEEECTTCEEE--EEECSS-CCBCCEECTTSS-----CTTCCHHHHCCCTTCCBCSTTCEEEEECC--SCEEEEEECG-
T ss_pred CEEEECCCCEEE--EEECCC-CceEEEEeCCCC-----cccccccccccccCccccCCCCEEEEEEC--CCceEEEEcC-
Confidence 689999999775 578754 567777665322 122110 01124789999988875 8999999999
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
.|...||.|.|+|+
T Consensus 86 -~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 86 -PHQGAGMVGKVTVN 99 (99)
T ss_dssp -GGTTTTCEEEEEEC
T ss_pred -CCcccCCEEEEEEC
Confidence 67778999999984
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.1e-06 Score=72.39 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=50.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|+ +.|... + |.+.......-+|.... ...||++++|.| ..+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~~~~~--~-----H~v~~~~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1paz_A 20 PAYIKANPGDTVT--FIPVDK--G-----HNVESIKDMIPEGAEKF---KSKINENYVLTV--TQPGAYLVKCT--PHYA 83 (123)
T ss_dssp SSEEEECTTCEEE--EEESSS--S-----CCCEECTTCSCTTCCCC---BCCTTCCEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEECCC--C-----eEEEEecccCCCCccce---ecCCCCEEEEEe--CCCEEEEEEeC--Cccc
Confidence 3689999999975 555532 3 43332111112332111 246899888777 58999999996 4677
Q ss_pred cCceeEEEEeCC
Q psy16562 189 DGLEGSMIIRTP 200 (445)
Q Consensus 189 ~Gl~G~lIV~~~ 200 (445)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1paz_A 84 MGMIALIAVGDS 95 (123)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEEcCC
Confidence 899999999864
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-06 Score=72.67 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=51.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|+|++||+|+ +.|... + |.+.......-||.... .+.||++++|.| ..+|+|+|+|. .|..
T Consensus 20 P~~i~V~~GdtV~--f~n~~~--~-----H~v~~~~~~~p~~~~~~---~~~pG~t~~~tF--~~~G~y~y~C~--~H~~ 83 (123)
T 1pmy_A 20 PALVRLKPGDSIK--FLPTDK--G-----HNVETIKGMAPDGADYV---KTTVGQEAVVKF--DKEGVYGFKCA--PHYM 83 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS--S-----CCCEECTTSSCTTCCCC---BCCTTSCEEEEC--CSCEEEEEECS--TTTT
T ss_pred CCEEEECCCCEEE--EEECCC--C-----cEEEEecccCCCCccce---ecCCCCEEEEEe--CCCeEEEEEeC--Cccc
Confidence 3689999999955 566532 3 33332211122332111 357999988877 58999999997 4667
Q ss_pred cCceeEEEEeCC
Q psy16562 189 DGLEGSMIIRTP 200 (445)
Q Consensus 189 ~Gl~G~lIV~~~ 200 (445)
.||.|.|+|.++
T Consensus 84 ~gM~G~I~V~~~ 95 (123)
T 1pmy_A 84 MGMVALVVVGDK 95 (123)
T ss_dssp TTCEEEEEESSC
T ss_pred cCCEEEEEEcCC
Confidence 899999999864
|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-06 Score=71.10 Aligned_cols=85 Identities=8% Similarity=0.117 Sum_probs=55.9
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
++.+.|++++|++++| .|.+.. .+.+++++..+.. .+|........+++.|.||+++++.|.+++.+|+|||+|
T Consensus 16 f~p~~i~v~~Gd~V~~--~N~~~~--~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C 89 (105)
T 3cvb_A 16 FEPANVTVHPGDTVKW--VNNKLP--PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYC 89 (105)
T ss_dssp EESSEEEECTTEEEEE--EECSSC--CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEEC
T ss_pred EeCCEEEEcCCCEEEE--EECCCC--CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEEe
Confidence 4567999999999865 588754 4566666654321 111111111246788999999999998854589999999
Q ss_pred EecC-CCceeeE
Q psy16562 344 KTLC-DSITAEA 354 (445)
Q Consensus 344 ~~~~-~~~~~~a 354 (445)
+..+ .++.+..
T Consensus 90 ~~H~~~GM~G~i 101 (105)
T 3cvb_A 90 APHRGAGMVGKI 101 (105)
T ss_dssp TTTGGGTCEEEE
T ss_pred CCchhcCCEEEE
Confidence 8542 3454443
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.16 E-value=8.8e-06 Score=69.41 Aligned_cols=79 Identities=13% Similarity=0.241 Sum_probs=55.9
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+-.|=-+.|++++||+|++ .|... .++++++... .+|........+.||++++|.| .++|+|+|||-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~-~~H~v~~~~~-------~~g~~~~~s~~l~pG~t~~~tF--~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEV-MPHNVAFKKG-------IVGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCC-CceEEEEeCC-------CCCcccccccccCCCCEEEEEc--CCCEEEEEEeCC
Confidence 4455557999999999864 58765 4566665432 1222222333588999999988 589999999965
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
|. ||.|.|+|+
T Consensus 122 --H~--gM~G~I~V~ 132 (132)
T 3c75_A 122 --HP--FMRGKVIVE 132 (132)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --Cc--CCEEEEEEC
Confidence 22 999999984
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=98.15 E-value=4.5e-06 Score=67.23 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc----ccccCCCCCCceEEEEecCCCcceEEecccc
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM----VTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG 184 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~----~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~ 184 (445)
-+.|+|++||+|+ +.|... .++++....-. +-+|.-. ...-.+.||+++++.| .++|+|+|+|-.
T Consensus 17 P~~i~v~~GdtV~--~~n~~~-~~H~v~~~~~~-----~p~g~~~~~~~~~~~~~~~g~~~~~tf--~~~G~y~y~C~~- 85 (98)
T 1iuz_A 17 PSKISVAAGEAIE--FVNNAG-FPHNIVFDEDA-----VPAGVDADAISYDDYLNSKGETVVRKL--STPGVYGVYCEP- 85 (98)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCEEEEECTTS-----SCTTCCHHHHCEEEEECSTTCEEEEEC--CSCEEEEEECTT-
T ss_pred CCEEEECCCCEEE--EEECCC-CCEEEEEeCCC-----CccccccccccccccccCCCCEEEEEc--CCCEEEEEEchh-
Confidence 3689999999865 457754 56666655421 1123211 0112488999988887 689999999974
Q ss_pred hhhhcCceeEEEEe
Q psy16562 185 LQKMDGLEGSMIIR 198 (445)
Q Consensus 185 ~q~~~Gl~G~lIV~ 198 (445)
|...||.|.|+|+
T Consensus 86 -H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 86 -HAGAGMKMTITVQ 98 (98)
T ss_dssp -TGGGTCEEEEEEC
T ss_pred -hccCCCEEEEEEC
Confidence 6667999999984
|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.4e-05 Score=65.97 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=50.4
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAK 344 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~ 344 (445)
..+.|++++|++++|++.|.... .+.+.+.+. | -+..+.||+++++.|.+++ +|+||++|+
T Consensus 36 ~p~~i~v~~G~~V~~~~~n~d~~--~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~-~G~y~~~C~ 96 (112)
T 1iby_A 36 EPETLVVKKGDAVKVVVENKSPI--SEGFSIDAF--------G--------VQEVIKAGETKTISFTADK-AGAFTIWCQ 96 (112)
T ss_dssp ESCEEEEETTCEEEEEEEECSSS--CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCS-CEEEEEBCS
T ss_pred cCCEEEEeCCCEEEEEEEECCCC--eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCC-CEEEEEECC
Confidence 34689999999999999999853 234444432 2 1567999999999999876 899999998
Q ss_pred ecC
Q psy16562 345 TLC 347 (445)
Q Consensus 345 ~~~ 347 (445)
..|
T Consensus 97 ~~~ 99 (112)
T 1iby_A 97 LHP 99 (112)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-05 Score=68.22 Aligned_cols=93 Identities=12% Similarity=0.017 Sum_probs=59.9
Q ss_pred CCCCCeEEEEcC-CEEEEEEEecCCC------CCceEeeCCccc-------CCCCCCCCC----Cc-c-cccCCCCCCce
Q psy16562 106 QLPGPSIQVCKG-DTIIVDVKNHMID------REVTLHWHGVYQ-------KVTPWMDGV----PM-V-TQCPIPSSTTF 165 (445)
Q Consensus 106 ~~PGPtI~v~~G-D~v~V~v~N~l~~------~~tsiHwHG~~~-------~~~~~~DGv----p~-~-tq~pI~pG~~~ 165 (445)
+|=-..|.|++| |+|.|.|.|...- ....|-=+|..+ ...+.++=+ +. + ..--|.||++.
T Consensus 14 ~F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 14 TYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred eEccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 343358999999 9999999998531 122222222110 000011111 11 0 11247899999
Q ss_pred EEEEecC---CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 166 RYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 166 ~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
++.|+++ ++|+|||.|-...|.. ||.|-|+|.+
T Consensus 94 svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 9999997 9999999998766666 8999999963
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.03 E-value=3.8e-05 Score=67.95 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=59.8
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCC------CCceEeeCCcccC------CCCCCC----CCCc-c-cccCCCCCCceE
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMID------REVTLHWHGVYQK------VTPWMD----GVPM-V-TQCPIPSSTTFR 166 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~------~~tsiHwHG~~~~------~~~~~D----Gvp~-~-tq~pI~pG~~~~ 166 (445)
+|=-..|.| +.||+|+|.|+|...- ...+|--+|.... ....++ +-+. + ..--|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 454458999 9999999999998641 1222222221000 000001 0010 1 112479999999
Q ss_pred EEEecC--CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 167 YKFPAM--PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 167 Y~f~~~--~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+.|+++ ++|+|||+|-...|.. ||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 999988 8999999998766666 8999999963
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=97.93 E-value=4.3e-05 Score=62.40 Aligned_cols=79 Identities=13% Similarity=0.228 Sum_probs=52.5
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+-.|=-..|+|+.||+|+ +.|... .++++...... .|........+.||+++++.| .++|+|+|+|-.
T Consensus 28 ~~~F~P~~i~V~~G~tV~--~~N~d~-~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf--~~~G~y~~~C~~ 95 (106)
T 1id2_A 28 KMKYLTPEVTIKAGETVY--WVNGEV-MPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF--NEAGSYDYFCTP 95 (106)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSS-SCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred ecEEeCCEEEECCCCEEE--EEECCC-CcEEEEEeCCC-------CCcccccccccCCCCEEEEEe--CCCEEEEEEeCC
Confidence 445545799999999976 457754 34444433211 111111112478999999888 689999999975
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
|. ||.|.|+|+
T Consensus 96 --H~--~M~G~I~V~ 106 (106)
T 1id2_A 96 --HP--FMRGKVIVE 106 (106)
T ss_dssp --CT--TCEEEEEEC
T ss_pred --CC--CCEEEEEEC
Confidence 32 999999984
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=97.88 E-value=3.5e-05 Score=64.75 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=48.4
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
+.|+|++||+|. +.|... . |++........+|.... .+.||++++|.| +++|+|+|+|-. |..
T Consensus 21 ~~i~V~~GdtV~--f~n~d~--~-----H~v~~~~~~~p~~~~~~---~~~~g~t~~~tF--~~~G~y~y~C~~--H~~- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVT--FIPTDK--G-----HNVETIKGMIPDGAEAF---KSKINENYKVTF--TAPGVYGVKCTP--HPF- 83 (122)
T ss_dssp SEEEECTTEEEE--EEESSS--S-----CCCEECTTCSCTTCCCC---BCCTTCCEEEEE--CSCEEEEEEETT--EEE-
T ss_pred CEEEECCCCEEE--EEECCC--C-----cEEEEcccccCCCccee---ecCCCCEEEEEe--CCCEEEEEEeCC--Ccc-
Confidence 689999999865 556632 3 44433211112232111 357899998888 589999999975 222
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
|.|.|+|.++
T Consensus 84 -M~G~I~V~~~ 93 (122)
T 2ux6_A 84 -MVGVVQVGDA 93 (122)
T ss_dssp -EEEEEEESSS
T ss_pred -CEEEEEEeCC
Confidence 9999999864
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=97.88 E-value=9.6e-05 Score=62.64 Aligned_cols=92 Identities=14% Similarity=0.076 Sum_probs=58.3
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCC------CCceEeeCCccc-------CCCCCCC----CCCc-c-cccCCCCCCce
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMID------REVTLHWHGVYQ-------KVTPWMD----GVPM-V-TQCPIPSSTTF 165 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~------~~tsiHwHG~~~-------~~~~~~D----Gvp~-~-tq~pI~pG~~~ 165 (445)
+|=-..|.| +.||+|+|.|.|...- ....|-=+|..+ ...+.+| +-+. + ..--|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (129)
T 2ccw_A 14 QYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESD 93 (129)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEE
Confidence 343358999 9999999999998641 112222222100 0000111 0111 1 11247999999
Q ss_pred EEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 166 RYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 166 ~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+..|+++ ++|+ |||.|-...|.. ||.|-|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 94 SVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 9999997 7766 999998766666 899999996
|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
Probab=97.80 E-value=8.6e-05 Score=63.61 Aligned_cols=72 Identities=11% Similarity=0.160 Sum_probs=51.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCC-----------------Ccce----eeEecEEEecCCc
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDG-----------------TAVE----PLVVDSVTLFPGD 324 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG-----------------~~v~----P~~~~~~~I~pGe 324 (445)
.+.|+|++|++|+|++.|.+... .|.|.+...+. .++. ....++..|.|||
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~--------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ--------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNE 105 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC--------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTC
T ss_pred CCeEEECCCCEEEEEEEeCCCCC--------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCC
Confidence 46899999999999999998541 34444443210 1111 1234566689999
Q ss_pred eEEEEEecCCCCceEEEEEEec
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~ 346 (445)
++++.|++++ +|+|+|+|+..
T Consensus 106 t~~v~f~~~~-pG~y~f~C~~~ 126 (139)
T 2aan_A 106 TVEVTFTAPA-AGTYLYICTVP 126 (139)
T ss_dssp EEEEEEECCS-SEEEEEECCST
T ss_pred EEEEEEECCC-CeEEEEEcCCC
Confidence 9999999986 89999999854
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.77 E-value=6.9e-05 Score=77.78 Aligned_cols=95 Identities=23% Similarity=0.254 Sum_probs=66.5
Q ss_pred cCCCe--EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEE
Q psy16562 92 TADGF--ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKF 169 (445)
Q Consensus 92 ~~dG~--~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f 169 (445)
..+|. ...+...+-.|--+.|+|.+||+|++.++|.... .-. .||...+. -|+- .-+.||++.++.|
T Consensus 538 ~RdGnkV~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~v-eDV--iHSF~IPs----lGIK----~DaiPGrtnsvtF 606 (638)
T 3sbq_A 538 IRDGNKVRVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQI-EDV--SHGFVVVN----HGVS----MEISPQQTSSITF 606 (638)
T ss_dssp EEETTEEEEEEEEETTEESCCEEEEETTCEEEEEEEECCCS-TTC--CEEEEETT----TTEE----EEECTTCEEEEEE
T ss_pred ccCCceEEEEEEEEcccccCCEEEEecCceeEEEEecCCcC-CCc--eeeeEecC----CCce----eeeCCCCeEEEEE
Confidence 34553 3345556667777899999999999999996320 111 24443322 1211 1478999999999
Q ss_pred ecCCCcceEEeccc--c-hhhhcCceeEEEEeC
Q psy16562 170 PAMPSGTFFYHSHV--G-LQKMDGLEGSMIIRT 199 (445)
Q Consensus 170 ~~~~~GT~wYH~H~--~-~q~~~Gl~G~lIV~~ 199 (445)
++.++|+|||+|.. + .| .+|.|-|+|++
T Consensus 607 tadkPGvY~y~CSE~CGa~H--s~M~G~ViVEP 637 (638)
T 3sbq_A 607 VADKPGLHWYYCSWFCHALH--MEMVGRMMVEP 637 (638)
T ss_dssp ECCSCEEEEEECCSCCSTTC--TTCEEEEEEEC
T ss_pred EcCCCEEEEEECCCcCCCCc--ccceEEEEEec
Confidence 99999999999984 2 22 37999999985
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=97.72 E-value=8.4e-05 Score=62.91 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=58.6
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCCCC-----ceEee--CCccc-------CCCCCCC----CCCc-c-cccCCCCCCc
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHW--HGVYQ-------KVTPWMD----GVPM-V-TQCPIPSSTT 164 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~~~-----tsiHw--HG~~~-------~~~~~~D----Gvp~-~-tq~pI~pG~~ 164 (445)
+|=-..|.| +.|++|+|+|.|... .+ +++-+ .+..+ ...+.+| +-+. + ..--|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGK-LPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSC-SCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCC-CcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCE
Confidence 444458999 999999999999864 22 22221 11000 0000111 1111 1 1124799999
Q ss_pred eEEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+++.|+++ ++|+ |+|.|-...|.. ||.|-|+|.
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 99999998 8995 999998766666 899999996
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00021 Score=60.47 Aligned_cols=91 Identities=9% Similarity=0.035 Sum_probs=58.5
Q ss_pred CCCCCeEEE-EcCCEEEEEEEecCCCCC-----ceEee--CCcc-------cCCCCCCCCCC----c-c-cccCCCCCCc
Q psy16562 106 QLPGPSIQV-CKGDTIIVDVKNHMIDRE-----VTLHW--HGVY-------QKVTPWMDGVP----M-V-TQCPIPSSTT 164 (445)
Q Consensus 106 ~~PGPtI~v-~~GD~v~V~v~N~l~~~~-----tsiHw--HG~~-------~~~~~~~DGvp----~-~-tq~pI~pG~~ 164 (445)
+|=-..|.| +.||+|+|+|.|... .+ +++-. .|.. +...+.++=++ . + .---|.||++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~-~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet 92 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cEecCEEEEecCCCEEEEEEEECCC-CcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCE
Confidence 343458999 999999999999864 21 22221 2211 00000111111 1 1 0114899999
Q ss_pred eEEEEecC--CCcc-eEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM--PSGT-FFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~--~~GT-~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
++..|+++ .+|+ |+|.|-...|.. ||.|-|+|.
T Consensus 93 ~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 93 DSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred EEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 99999997 7887 999998766666 899999984
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00026 Score=74.58 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=52.1
Q ss_pred cccceEEEecCcEEEEEEEccCCC-ceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCL-ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
++++.|+|++|++++|++.|.... ...+.|++.++.+ .+.+.||+..++.|++++ +|+||||
T Consensus 510 f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv----------------~~~i~PG~t~t~~Fta~~-pGtY~yh 572 (595)
T 1fwx_A 510 FSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------------AMEIGPQMTSSVTFVAAN-PGVYWYY 572 (595)
T ss_dssp ESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS-CEEEEEE
T ss_pred ccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc----------------ceeeCCCCeEEEEEECCC-CEEEEEE
Confidence 667899999999999999997632 1245555555432 157899999999999987 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|+..|
T Consensus 573 C~e~C 577 (595)
T 1fwx_A 573 CQWFC 577 (595)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 98554
|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00021 Score=57.51 Aligned_cols=70 Identities=10% Similarity=0.195 Sum_probs=52.2
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..|++++|++|+|.+.|.+.. .+.|.+++... ...+.||+..++.|++++ +|+|.|+|...
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~--~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~-~G~Y~y~C~~H 88 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKS--EHTFTIKKLGI----------------DVVVESGKEKNITVKPKS-AGTYELICRYH 88 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSS--CEEEEEGGGTE----------------EEEECTTCEEEEEECCCS-CEEEEEECTTT
T ss_pred CEEEECCCCEEEEEEEcCCCc--eEEEEEecCCc----------------ceeecCCcceeEEEeccc-CceEEEECccc
Confidence 479999999999999999864 35555554332 235789999999999987 79999999654
Q ss_pred C-CCceeeEE
Q psy16562 347 C-DSITAEAV 355 (445)
Q Consensus 347 ~-~~~~~~ai 355 (445)
| .++.+..+
T Consensus 89 ~~~gM~G~i~ 98 (100)
T 4hci_A 89 LLKGMEGKVI 98 (100)
T ss_dssp GGGTCEEEEE
T ss_pred cCCCCEEEEE
Confidence 3 44444433
|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00023 Score=62.18 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=54.2
Q ss_pred eEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEeccc--ceEEEccCCCcceeeEecEEEecCCc
Q psy16562 247 AILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKH--QLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 247 ~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh--~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
.+.++|... |.|+|++|++++|++.|.+... .+.+.+... .+.....+ ..+.+.......|.|||
T Consensus 52 ~~~~~g~~~-----------p~i~V~~GD~V~~~~tN~~~~~-~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 52 SFEVHDKKN-----------PTLEIPAGATVDVTFINTNKGF-GHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp CEEETTEES-----------CEEEECTTCEEEEEEEECCTTC-CCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTB
T ss_pred cccccCCCC-----------CEEEEeCCCEEEEEEEcCCCCe-eeEEEEeecCcchhccccc-cccccccccccccCCCC
Confidence 567777633 5899999999999999975321 222222211 11000000 00100000112679999
Q ss_pred --eEEEEEecCCCCceEEEEEEec--C-CCceeeEE
Q psy16562 325 --RVDVIIHTNQSNNLYWMQAKTL--C-DSITAEAV 355 (445)
Q Consensus 325 --R~dv~v~~~~~~G~y~~~~~~~--~-~~~~~~ai 355 (445)
+.++.|++ + +|+|||+|+.. | .++.+..+
T Consensus 119 sgt~t~tft~-~-pGtY~y~C~~~gH~~~GM~G~Ii 152 (154)
T 2cal_A 119 FGYTDFTWHP-T-AGTYYYVCQIPGMAATGMFGKIV 152 (154)
T ss_dssp EEEEEEEECC-C-SEEEEEECCSTTTGGGTCEEEEE
T ss_pred ceEEEEEEEE-C-CceEEEECCCCCHHHCCCEEEEE
Confidence 88999998 6 89999999754 3 34444433
|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
Probab=97.31 E-value=5.8e-05 Score=61.31 Aligned_cols=82 Identities=7% Similarity=0.091 Sum_probs=49.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|+|++|++++|. |.+.. .+.+.+++..+. ..+|........+.+.+.||+++++.|.++..+|+|||+|+.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~--~H~~~~~~~~~~--~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP--PHNVVFDAALNP--AKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEP 92 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--CCCBEECSSSST--TCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC--CceEEEeCCCCc--ccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCC
Confidence 468999999998875 77643 234444432210 011211000112456789999999988774458999999984
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 93 H~~~GM~G~ 101 (106)
T 2gim_A 93 HRGAGMVGK 101 (106)
T ss_dssp TGGGTCEEE
T ss_pred hhhcCcEEE
Confidence 33 244443
|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.003 Score=50.10 Aligned_cols=70 Identities=10% Similarity=0.217 Sum_probs=45.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|++++|++++| .|.+.. .+.+.+++..+ -+|..-.....+...+.||+++.+.| ++ +|.|+|+|+.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~--~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~y~C~~ 85 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF--PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKL--TA-AGEYGYYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC--CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEE--EECCCC--ceEEEEeCCCC----CCccccccccccceecCCCCEEEEEe--CC-CeEEEEEcCC
Confidence 46899999999887 677643 45665654321 02211100123567899999998865 44 8999999975
Q ss_pred c
Q psy16562 346 L 346 (445)
Q Consensus 346 ~ 346 (445)
.
T Consensus 86 H 86 (98)
T 2plt_A 86 H 86 (98)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00071 Score=57.83 Aligned_cols=78 Identities=9% Similarity=0.068 Sum_probs=49.1
Q ss_pred cceEEEecCcEEEEEEEc--cCCCceeEEEEeccc--ceEEE-------ccCCCcce-----eeEecEEEecCCceEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIG--GSCLACPLIFTIEKH--QLQVI-------ASDGTAVE-----PLVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN--~~~~~~~~~~~i~gh--~~~vi-------a~DG~~v~-----P~~~~~~~I~pGeR~dv~ 329 (445)
...|+|++|++|+|++.| .+.. .+.+.+... .+.-. ..+..++. ....++..|.||++.++.
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~--~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGV--QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCC--CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCC--ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 358999999999999999 4432 233333211 00000 00111111 123455678999999999
Q ss_pred EecCCCCceEEEEEEec
Q psy16562 330 IHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 330 v~~~~~~G~y~~~~~~~ 346 (445)
|++++ +|.|+|+|...
T Consensus 110 ~~~~~-~G~y~f~C~~~ 125 (140)
T 1qhq_A 110 FRTPA-PGTYLYICTFP 125 (140)
T ss_dssp EECCS-SEEEEEECCST
T ss_pred EEeCC-CeeEEEEeCCc
Confidence 99976 89999999854
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0082 Score=50.17 Aligned_cols=88 Identities=13% Similarity=0.156 Sum_probs=54.2
Q ss_pred CCCCeEEEEc-CCEEEEEEEecCCC------CCceEee---------CCcccC-CCCCCC-CCCcc--cccCCCCCCceE
Q psy16562 107 LPGPSIQVCK-GDTIIVDVKNHMID------REVTLHW---------HGVYQK-VTPWMD-GVPMV--TQCPIPSSTTFR 166 (445)
Q Consensus 107 ~PGPtI~v~~-GD~v~V~v~N~l~~------~~tsiHw---------HG~~~~-~~~~~D-Gvp~~--tq~pI~pG~~~~ 166 (445)
|=-..|.|+. |++|+|+|.|...- ....|-- -|+... ...++. +-+.+ .-.-|.||++++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 4456899986 99999999999741 1222211 111110 001110 11111 111379999999
Q ss_pred EEEecC---CCcceEEecccchhhhcCceeEEEEe
Q psy16562 167 YKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 167 Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
..|+.+ ++|+|.|-|. .|. ||.|-|+|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999998 8999999999 444 899999984
|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0022 Score=51.96 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=41.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|+|++|++++| .|.... .+.+.++. ..||.. . .++-.|.||+++++.| ++ +|+|||+|+.
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~--~H~v~~~~------~~~g~~--~--~~~~~~~pG~~~~~tf--~~-~G~y~y~C~~ 94 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM--PHNVHFVA------GVLGEA--A--LKGPMMKKEQAYSLTF--TE-AGTYDYHCTP 94 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS--CBCCEECT------TTSSSS--C--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCCC--CEEEEEcC------CCCCcc--c--ccccccCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 46899999999877 487753 23333332 124431 1 1223478999998876 44 8999999965
|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0026 Score=50.55 Aligned_cols=76 Identities=7% Similarity=0.084 Sum_probs=47.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++++|+ |.+.. .+.+.+++...- +.+ -.....+...+.||+++.+.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--~H~~~~~~~~~p--g~~---~~~~~~~~~~~~pG~~~~~tf--~~-~G~y~~~C~~ 85 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS--PHNIVFDADGVP--ADT---AAKLSHKGLLFAAGESFTSTF--TE-PGTYTYYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--CEEEEECCSSSC--HHH---HHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEE--ECCCC--CcEEEEeCCCCC--ccc---cccccccccccCCCCEEEEEc--CC-CeEEEEEcCC
Confidence 458999999999886 76543 355555442210 000 000113567899999998865 44 8999999985
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 86 H~~~gM~G~ 94 (98)
T 1pcs_A 86 HRGAGMVGK 94 (98)
T ss_dssp GTTTTCEEE
T ss_pred ccccCCeEE
Confidence 43 244444
|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0031 Score=53.22 Aligned_cols=81 Identities=10% Similarity=0.097 Sum_probs=48.4
Q ss_pred cceEEEecC-cEEEEEEEccCCCc---eeEEEEecccce-EEEccC----C---Ccce---ee-EecEEEecCCceEEEE
Q psy16562 266 MHFFKVQRD-KRYLMRIIGGSCLA---CPLIFTIEKHQL-QVIASD----G---TAVE---PL-VVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~G-~~~rlRliN~~~~~---~~~~~~i~gh~~-~via~D----G---~~v~---P~-~~~~~~I~pGeR~dv~ 329 (445)
...|+|++| ++++|.+.|.+... ..+.|.|..... .-++.| | .++. +. ...+-.|.|||++++.
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVK 96 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEE
Confidence 468999999 99999999998531 123333322210 000000 0 1111 10 0123358999999999
Q ss_pred EecC--CCCceEEEEEEec
Q psy16562 330 IHTN--QSNNLYWMQAKTL 346 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~~ 346 (445)
|+++ ..+|+|||.|...
T Consensus 97 f~~~~~~~~G~Y~f~C~~p 115 (129)
T 1cuo_A 97 FKVSALSKDEAYTYFCSYP 115 (129)
T ss_dssp EEGGGCCTTSCEEEECCST
T ss_pred EeccccCCCceEEEEeCCC
Confidence 9987 2389999999643
|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0069 Score=47.16 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=43.3
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...+++++|++++|+ |.+.. .+.+.+++. . +...+...+.||+.+.+.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~--~H~v~~~~~---------~---~~~~~~~~~~~g~~~~~~f--~~-~G~y~~~C~~ 78 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA--PHNVVVEGQ---------P---ELSHKDLAFSPGETFEATF--SE-PGTYTYYCEP 78 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--CEEEEETTC---------G---GGCEEEEECSTTCEEEEEC--CS-CEEEEEECTT
T ss_pred CCEEEECCCCEEEEE--ECCCC--CcEEEEeCC---------C---ccCcccceeCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 458999999999876 66533 345555441 1 1123557789999988865 44 8999999985
Q ss_pred cC
Q psy16562 346 LC 347 (445)
Q Consensus 346 ~~ 347 (445)
.|
T Consensus 79 H~ 80 (91)
T 1bxv_A 79 HR 80 (91)
T ss_dssp TG
T ss_pred Cc
Confidence 45
|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0024 Score=56.31 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=52.1
Q ss_pred cceEEE-ecCcEEEEEEEccCCCce---eEEEEecccc-eEEEcc------CCCcce---e-eEecEEEecCCceEEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLAC---PLIFTIEKHQ-LQVIAS------DGTAVE---P-LVVDSVTLFPGDRVDVII 330 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~~---~~~~~i~gh~-~~via~------DG~~v~---P-~~~~~~~I~pGeR~dv~v 330 (445)
...|+| ++|++|+|.|.|.+...+ .+.|.|.... +.-++. +-.+++ + ....+..|.||+++++.|
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 458999 999999999999985410 1233332211 000000 001121 1 112334689999999999
Q ss_pred ecC--CCCceEEEEEEecC--CCceeeEE
Q psy16562 331 HTN--QSNNLYWMQAKTLC--DSITAEAV 355 (445)
Q Consensus 331 ~~~--~~~G~y~~~~~~~~--~~~~~~ai 355 (445)
+++ + +|+|||.|...| .++.+..+
T Consensus 137 ~~~~lk-pG~Y~f~Ct~PgH~~gM~G~i~ 164 (167)
T 3ay2_A 137 DPAKLA-DGDYKFACTFPGHGALMNGKVT 164 (167)
T ss_dssp CGGGGT-TSCEEEECCSTTGGGTSEEEEE
T ss_pred ecCCCC-CcEEEEEcCCCCchhcCEEEEE
Confidence 987 5 799999996432 34444433
|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0044 Score=52.31 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=47.7
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEc-------cCCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIA-------SDGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via-------~DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++|+|.+.|.+... ..+.|.|.... +.-++ .+-.++. + ....+-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 458999 99999999999998531 01333333221 00000 0111111 1 11123358999999999
Q ss_pred EecC--CCCceEEEEEEe
Q psy16562 330 IHTN--QSNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~ 345 (445)
|+++ +++++|||.|.-
T Consensus 97 f~~~~l~~G~~Y~f~C~~ 114 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFCSF 114 (129)
T ss_dssp EEGGGSCTTCCEEEECCS
T ss_pred EeccccCCCceEEEEeCC
Confidence 9997 644569999864
|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0074 Score=50.80 Aligned_cols=80 Identities=14% Similarity=0.210 Sum_probs=47.1
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEcc-------CCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIAS-------DGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via~-------DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++|+|.+.|.+... ..++|.|.... +.-++. +-.+++ + ....+-.|.|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 458999 99999999999998541 01333332211 000000 111221 1 11122358999999999
Q ss_pred EecC--CCCceEEEEEEe
Q psy16562 330 IHTN--QSNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G~y~~~~~~ 345 (445)
|+++ ++.++|+|.|..
T Consensus 97 f~~~~l~~G~~Y~f~C~~ 114 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCSF 114 (128)
T ss_dssp EEGGGSCTTSCEEEECCS
T ss_pred EeccccCCCceEEEEECC
Confidence 9987 533449999864
|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.023 Score=47.76 Aligned_cols=79 Identities=11% Similarity=0.120 Sum_probs=47.0
Q ss_pred cceEEE-ecCcEEEEEEEccCCCc---eeEEEEecccc-eEEEc-------cCCCcce---e-eEecEEEecCCceEEEE
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLA---CPLIFTIEKHQ-LQVIA-------SDGTAVE---P-LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~---~~~~~~i~gh~-~~via-------~DG~~v~---P-~~~~~~~I~pGeR~dv~ 329 (445)
...|+| ++|++++|.+.|.+... ..+++.|.... +.-++ .|-.++. + ....+-.|.|||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 458999 99999999999998531 01233332211 00000 0111121 1 11123358999999999
Q ss_pred EecC--CCCc-eEEEEEEe
Q psy16562 330 IHTN--QSNN-LYWMQAKT 345 (445)
Q Consensus 330 v~~~--~~~G-~y~~~~~~ 345 (445)
|+++ + +| +|+|.|..
T Consensus 96 f~~~~l~-~G~~Y~f~C~~ 113 (128)
T 2iaa_C 96 FDVSKLK-EGEDYAFFCSF 113 (128)
T ss_dssp EESSCCC-TTCCEEEECCS
T ss_pred EeccccC-CCceEEEEECC
Confidence 9987 5 67 59999864
|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0067 Score=48.45 Aligned_cols=75 Identities=5% Similarity=-0.040 Sum_probs=45.2
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCc-------cee-eEecEEEecCCceEEEEEecCCCC
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTA-------VEP-LVVDSVTLFPGDRVDVIIHTNQSN 336 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~-------v~P-~~~~~~~I~pGeR~dv~v~~~~~~ 336 (445)
..+.|+|++|++|+|+ |.+... |.+.+..-++.. ..+ ...+.+.+.||+++++.| ++ +
T Consensus 15 ~P~~i~v~~G~tV~~~--n~~~~~---------H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf--~~-~ 80 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LVGETG---------HNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--ST-P 80 (102)
T ss_dssp ESSEEEECTTCCEEEE--ECSSSC---------BCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CS-C
T ss_pred eCCEEEECCCCEEEEE--ECCCCC---------eEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe--CC-C
Confidence 3468999999999875 776432 233322223321 001 112456789999988855 44 8
Q ss_pred ceEEEEEEecC-CCceee
Q psy16562 337 NLYWMQAKTLC-DSITAE 353 (445)
Q Consensus 337 G~y~~~~~~~~-~~~~~~ 353 (445)
|+|+|+|+..+ .++.+.
T Consensus 81 G~y~y~C~~H~~~gM~G~ 98 (102)
T 1kdj_A 81 GTYTFYCTPHKSANMKGT 98 (102)
T ss_dssp EEEEEECSTTGGGTCEEE
T ss_pred eEEEEEeCCCcccCCeEE
Confidence 99999998443 244444
|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0073 Score=50.46 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=43.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.+.|.+ |.+...+ + ..|.....+.+.||+.+++.| ++ +|.|||+|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~~------------H~v~~~~--~--~~P~g~~~f~~~pg~t~s~TF--~~-pG~y~y~C~~ 80 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDKS------------HNVEAIK--E--ILPEGVESFKSKINESYTLTV--TE-PGLYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEEESSTT------------CCCEECT--T--SSCTTCCCCBCCTTCCEEEEE--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEEECCCC------------ceEEEcC--C--cCCCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 45899999999999877732 2222221 1 001112234467999988877 44 7999999986
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.| .++.+.
T Consensus 81 H~~~GM~G~ 89 (123)
T 3erx_A 81 HFGMGMVGL 89 (123)
T ss_dssp GTTTTCEEE
T ss_pred CCcCCcEEE
Confidence 53 344443
|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.014 Score=46.12 Aligned_cols=75 Identities=8% Similarity=0.068 Sum_probs=43.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++++|+ |.+... +.+.++...+ -+|. .....+...+.||+++++.| ++ +|.|+|+|+.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~~--H~~~~~~~~~----~~~~--~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C~~ 84 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVGP--HNVIFDKVPA----GESA--PALSNTKLAIAPGSFYSVTL--GT-PGTYSFYCTP 84 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSCC--CCBEEEECCT----TSCH--HHHCBCCCCCSCSCCEEEEC--CS-CSEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCCC--eEEEEeCCCC----cccc--ccccccceecCCCCEEEEEe--CC-CeEEEEEccC
Confidence 357999999998775 765322 2222222111 0110 00112456789999998865 44 8999999985
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 85 H~~~gM~G~ 93 (97)
T 1b3i_A 85 HRGAGMVGT 93 (97)
T ss_dssp TTTTTCEEE
T ss_pred hhhcCCEEE
Confidence 43 244443
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.045 Score=46.38 Aligned_cols=72 Identities=13% Similarity=0.259 Sum_probs=53.2
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--c-hh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--G-LQ 186 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~-~q 186 (445)
..|.+..|++|++.+.|.. . .|+...+. .|.- .-+.||+.-++.|++.++|+|.|+|.- + .|
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V-----~Hsf~ip~----~~~k----~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--V-----IHGFHVEG----TNIN----VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--S-----CEEEEETT----SSCE----EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC--c-----cceEEecC----CCce----eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc
Confidence 4899999999999999873 2 24444332 1111 136789999999999999999999963 2 33
Q ss_pred hhcCceeEEEEe
Q psy16562 187 KMDGLEGSMIIR 198 (445)
Q Consensus 187 ~~~Gl~G~lIV~ 198 (445)
.+|.|-++|.
T Consensus 125 --~~M~g~v~V~ 134 (135)
T 2cua_A 125 --QNMFGTIVVK 134 (135)
T ss_dssp --TTCEEEEEEE
T ss_pred --CCCEEEEEEE
Confidence 3899999886
|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
Probab=95.87 E-value=0.011 Score=49.47 Aligned_cols=80 Identities=11% Similarity=0.226 Sum_probs=48.5
Q ss_pred cceEEEec-CcEEEEEEEccCCCc---eeEEEEeccc-ceEEEc-------cCCCccee----eEecEEEecCCceEEEE
Q psy16562 266 MHFFKVQR-DKRYLMRIIGGSCLA---CPLIFTIEKH-QLQVIA-------SDGTAVEP----LVVDSVTLFPGDRVDVI 329 (445)
Q Consensus 266 ~~~i~v~~-G~~~rlRliN~~~~~---~~~~~~i~gh-~~~via-------~DG~~v~P----~~~~~~~I~pGeR~dv~ 329 (445)
...|+|++ |+++||.|.|.+... ..+++-|... .+.-++ .|-.++++ +...+-.|.|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 45899976 999999999999541 0122223210 000001 12234432 22344469999999999
Q ss_pred EecCC--CCceEEEEEEe
Q psy16562 330 IHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 330 v~~~~--~~G~y~~~~~~ 345 (445)
|+++. .+|+|.|.|..
T Consensus 97 f~~~~l~~~G~y~f~C~g 114 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCAA 114 (125)
T ss_dssp EEGGGC---CCEEEECSS
T ss_pred EeCcCcCCCccEEEEcCC
Confidence 99982 47999998873
|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.029 Score=44.45 Aligned_cols=72 Identities=10% Similarity=0.124 Sum_probs=43.1
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
+....|+|++|++++|. |.... .+.+.+....+ -+|........+...+.||+++++.| ++ +|.|+|+|
T Consensus 15 F~P~~i~v~~GdtV~~~--n~~~~--~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf--~~-~G~y~y~C 83 (98)
T 1iuz_A 15 FVPSKISVAAGEAIEFV--NNAGF--PHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKL--ST-PGVYGVYC 83 (98)
T ss_dssp EESSEEEECTTCEEEEE--ECSSC--CEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEEC
T ss_pred EeCCEEEECCCCEEEEE--ECCCC--CEEEEEeCCCC----ccccccccccccccccCCCCEEEEEc--CC-CEEEEEEc
Confidence 33468999999998875 66543 34444332100 01211111112346799999998866 44 89999998
Q ss_pred Eec
Q psy16562 344 KTL 346 (445)
Q Consensus 344 ~~~ 346 (445)
...
T Consensus 84 ~~H 86 (98)
T 1iuz_A 84 EPH 86 (98)
T ss_dssp TTT
T ss_pred hhh
Confidence 644
|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.016 Score=45.93 Aligned_cols=77 Identities=10% Similarity=0.208 Sum_probs=45.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce--eeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
...|+|++|++++| .|.+.. .+.+.++...+ .+|.... ....+.+.+.||+++.+.|+ + +|.|+|+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--~H~~~~~~~~~----p~g~~~~~~~~~~~~~~~~~G~~~~~~f~--~-~G~y~~~C 84 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF--PHNDLFDKKEV----PAGVDVTKISMPEEDLLNAPGEEYSVTLT--E-KGTYKFYC 84 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC--CBCCEECTTSS----CTTCCHHHHSCCTTCCBCSTTCEEEEEEC--S-CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC--cceEEEeCCCC----ccccccccccccccceeeCCCCEEEEEeC--C-CcEEEEEc
Confidence 45899999999877 677643 23333433211 1221110 00123467899999998764 4 89999999
Q ss_pred EecC-CCceee
Q psy16562 344 KTLC-DSITAE 353 (445)
Q Consensus 344 ~~~~-~~~~~~ 353 (445)
+..+ .++.+.
T Consensus 85 ~~H~~~gM~G~ 95 (99)
T 1byp_A 85 APHAGAGMVGK 95 (99)
T ss_dssp GGGTTTTCEEE
T ss_pred CCccccCCEEE
Confidence 8543 344443
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.065 Score=55.81 Aligned_cols=66 Identities=14% Similarity=0.267 Sum_probs=51.9
Q ss_pred cccceEEEecCcEEEEEEEccCC--CceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSC--LACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWM 341 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~--~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~ 341 (445)
+....|+|+.|++|+|.+.|... . -.+.|.|.++++. +.+.||+...+.|++++ +|.||+
T Consensus 555 FsP~eI~VP~GdtVrfiLTN~D~veD-ViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PGvY~y 616 (638)
T 3sbq_A 555 FGVQEFTVKQGDEVTVTITNIDQIED-VSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PGLHWY 616 (638)
T ss_dssp ESCCEEEEETTCEEEEEEEECCCSTT-CCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CEEEEE
T ss_pred ccCCEEEEecCceeEEEEecCCcCCC-ceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CEEEEE
Confidence 44568999999999999999752 2 2566666655433 25889999999999987 799999
Q ss_pred EEEecC
Q psy16562 342 QAKTLC 347 (445)
Q Consensus 342 ~~~~~~ 347 (445)
+|.-.|
T Consensus 617 ~CSE~C 622 (638)
T 3sbq_A 617 YCSWFC 622 (638)
T ss_dssp ECCSCC
T ss_pred ECCCcC
Confidence 998765
|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
Probab=95.43 E-value=0.018 Score=45.70 Aligned_cols=77 Identities=8% Similarity=0.217 Sum_probs=45.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce--eeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
.+.|+|++|++++| .|.+.. .+.+.++...+ -+|.... ....+.+.+.||+++++.| ++ +|+|+|+|
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~tf--~~-~G~y~~~C 84 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF--PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVAL--SN-KGEYSFYC 84 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC--CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEEC--CS-CEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC--ceEEEEeCCCC----cccccccccccccCccccCCCCEEEEEE--CC-CceEEEEc
Confidence 46899999998877 677643 23333433211 0221100 0012335689999998866 44 89999999
Q ss_pred EecC-CCceee
Q psy16562 344 KTLC-DSITAE 353 (445)
Q Consensus 344 ~~~~-~~~~~~ 353 (445)
...+ .++.+.
T Consensus 85 ~~H~~~gM~G~ 95 (99)
T 1plc_A 85 SPHQGAGMVGK 95 (99)
T ss_dssp GGGTTTTCEEE
T ss_pred CCCcccCCEEE
Confidence 8543 344443
|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.011 Score=49.57 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=39.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.+.|. +|.+...+ +. + |.....+.+.||+++++.| ++ +|.|||+|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~------------~H~v~~~~--~~-~-P~g~~~f~s~pGet~s~TF--~~-pG~y~y~C~~ 82 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK------------GHNSALMK--GG-A-PEGAETWKGKINEEITVTL--SK-PGVYMYQCAP 82 (127)
T ss_dssp SSEEEECTTCEEEEECSSS------------SCCCEECT--TC-S-CTTCCCCBCCTTCCCEEEC--CS-CEEEEEECTT
T ss_pred CCEEEECCCCEEEEEECCC------------CceEEEcc--Cc-C-CCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 4689999999998876653 13332221 10 0 1111234457999988776 44 8999999975
Q ss_pred c
Q psy16562 346 L 346 (445)
Q Consensus 346 ~ 346 (445)
.
T Consensus 83 H 83 (127)
T 3tu6_A 83 H 83 (127)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=94.86 E-value=0.15 Score=44.82 Aligned_cols=74 Identities=15% Similarity=0.292 Sum_probs=54.3
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc--chhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV--GLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~--~~q~ 187 (445)
..|.+..|++|++.++|.. . .|+...+.. |+ +--+.||+.-+..|+++++|+|++.|.- |. .
T Consensus 93 n~l~VP~G~~Vr~~vTS~D--V-----iHsf~IP~l----gi----k~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~-~ 156 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPD--V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTFKRPGEYRIICNQYCGL-G 156 (168)
T ss_dssp SSEEEETTSEEEEEEECSS--S-----CEEEEETTS----SC----EEEECTTBCEEEEEECCSCEEEEEECCSCCST-T
T ss_pred CEEEEeCCCeEEEEEecCC--c-----eEEEEECCC----Ce----EEEecCCceeEEEEEeCCCEEEEEECCcCCCC-C
Confidence 5799999999999999973 2 245544321 11 1135689999999999999999999983 42 2
Q ss_pred hcCceeEEEEeC
Q psy16562 188 MDGLEGSMIIRT 199 (445)
Q Consensus 188 ~~Gl~G~lIV~~ 199 (445)
-.+|.|-++|++
T Consensus 157 Hs~M~g~V~V~e 168 (168)
T 3s8f_B 157 HQNMFGTIVVKE 168 (168)
T ss_dssp GGGCEEEEEEEC
T ss_pred cCCCEEEEEEeC
Confidence 247999999863
|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=94.02 E-value=0.055 Score=45.53 Aligned_cols=63 Identities=10% Similarity=0.119 Sum_probs=39.5
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++++|+ |.... ++.+.+.... +|. .. .+.-.+.||+++++.| ++ +|.|+|+|..
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~--~H~v~~~~~~------~g~--~~--~~s~~l~pG~t~~~tF--~~-~G~y~y~C~~ 121 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM--PHNVAFKKGI------VGE--DA--FRGEMMTKDQAYAITF--NE-AGSYDYFCTP 121 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--CBCCEECTTT------SSS--SC--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CCEEEECCCCEEEEE--ECCCC--ceEEEEeCCC------CCc--cc--ccccccCCCCEEEEEc--CC-CEEEEEEeCC
Confidence 358999999999875 77643 2233332111 121 01 1233578999999877 44 7999999854
|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
Probab=93.72 E-value=0.042 Score=45.86 Aligned_cols=69 Identities=13% Similarity=-0.001 Sum_probs=41.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|...+ . ++++.+ . ++ .+ |.....+.+.||++|++.| ++ +|.|+|+|..
T Consensus 21 P~~i~V~~GDTV~f~n~~---~--~Hnv~~-------~--~~-~~-p~g~~~~~~~pg~t~s~TF--~~-~G~y~Y~C~~ 81 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTD---K--SHNAES-------V--RE-VW-PEGVAPVKGGFSKEVVFNA--EK-EGLYVLKCAP 81 (124)
T ss_dssp SSEEEECTTCEEEEECSS---S--SCCCEE-------C--TT-TS-CTTSCCCBCCTTCCEEEEC--CS-SEEEEEECTT
T ss_pred CCEEEECCCCEEEEEECC---C--CccEEE-------e--CC-cC-CCCccccccCCCCEEEEEe--CC-CeEEEEEcCC
Confidence 458999999998876443 1 122222 1 11 00 2112344567999988876 44 7999999975
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.| .++.+.
T Consensus 82 H~~~GM~G~ 90 (124)
T 3ef4_A 82 HYGMGMVVL 90 (124)
T ss_dssp TGGGTCEEE
T ss_pred CCcCCCEEE
Confidence 53 344443
|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=93.15 E-value=0.096 Score=42.13 Aligned_cols=62 Identities=8% Similarity=0.085 Sum_probs=38.5
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
..|+|++|++++|+ |..... +.+.+.... .|. .. .+.-.|.||+++.+.| ++ +|.|+|+|..
T Consensus 34 ~~i~V~~G~tV~~~--N~d~~~--H~v~~~~~~------~~~--~~--~~s~~l~~g~~~~~tf--~~-~G~y~~~C~~ 95 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGEVMP--HNVAFKKGI------VGE--DA--FRGEMMTKDQAYAITF--NE-AGSYDYFCTP 95 (106)
T ss_dssp SEEEECTTCEEEEE--ECSSSC--BCCEECTTT------SSS--SC--EECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CEEEECCCCEEEEE--ECCCCc--EEEEEeCCC------CCc--cc--ccccccCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 58999999999876 776432 232222111 010 01 1223578999998876 44 7999999865
|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
Probab=93.12 E-value=0.079 Score=44.05 Aligned_cols=60 Identities=10% Similarity=0.185 Sum_probs=37.4
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
...|+|++|++|+|...+. +|.+...+ -|| ...+.+.||+++.+.| ++ +|.|+|+
T Consensus 20 P~~i~V~~GdtV~f~~~~~------------~H~v~~~~~~~p~~-------~~~~~~~pG~t~~~tF--~~-~G~y~y~ 77 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDK------------GHNVESIKDMIPEG-------AEKFKSKINENYVLTV--TQ-PGAYLVK 77 (123)
T ss_dssp SSEEEECTTCEEEEEESSS------------SCCCEECTTCSCTT-------CCCCBCCTTCCEEEEC--CS-CEEEEEE
T ss_pred CCEEEECCCCEEEEEECCC------------CeEEEEecccCCCC-------ccceecCCCCEEEEEe--CC-CEEEEEE
Confidence 4589999999998765443 13333221 022 1123346999877665 44 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|...|
T Consensus 78 C~~H~ 82 (123)
T 1paz_A 78 CTPHY 82 (123)
T ss_dssp CTTTG
T ss_pred eCCcc
Confidence 96543
|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=93.04 E-value=0.077 Score=44.15 Aligned_cols=63 Identities=13% Similarity=0.145 Sum_probs=37.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|...+. +|.+.... |-. |.....+.+.||+++.+.| ++ +|.|+|+|..
T Consensus 20 P~~i~V~~GdtV~f~n~~~------------~H~v~~~~-~~~---p~~~~~~~~~pG~t~~~tF--~~-~G~y~y~C~~ 80 (123)
T 1pmy_A 20 PALVRLKPGDSIKFLPTDK------------GHNVETIK-GMA---PDGADYVKTTVGQEAVVKF--DK-EGVYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEECSSS------------SCCCEECT-TSS---CTTCCCCBCCTTSCEEEEC--CS-CEEEEEECST
T ss_pred CCEEEECCCCEEEEEECCC------------CcEEEEec-ccC---CCCccceecCCCCEEEEEe--CC-CeEEEEEeCC
Confidence 3589999999988754432 23333321 000 1111223457999887666 44 7999999975
Q ss_pred cC
Q psy16562 346 LC 347 (445)
Q Consensus 346 ~~ 347 (445)
.|
T Consensus 81 H~ 82 (123)
T 1pmy_A 81 HY 82 (123)
T ss_dssp TT
T ss_pred cc
Confidence 44
|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
Probab=92.77 E-value=0.74 Score=38.75 Aligned_cols=60 Identities=17% Similarity=0.313 Sum_probs=45.4
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.|.++.|+++||++.|... .+.|.+....+ .+.+.||+.-.+.+++++ +|.|++.|.-.|
T Consensus 61 ~l~Vp~G~~V~~~vts~DV---~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~-~G~y~~~C~e~C 120 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDV---IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 120 (135)
T ss_dssp SEEEETTSEEEEEEEBSSS---CEEEEETTSSC----------------EEEECBTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred EEEEcCCCEEEEEEEeCCc---cceEEecCCCc----------------eeEeCCCCcEEEEEEcCC-CEEEEEECcccC
Confidence 6999999999999998752 34555544332 245678988888899887 799999996654
|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
Probab=91.40 E-value=1 Score=39.34 Aligned_cols=60 Identities=17% Similarity=0.313 Sum_probs=46.7
Q ss_pred eEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEecC
Q psy16562 268 FFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTLC 347 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~~ 347 (445)
.+.++.|+++||++.|... .+.|.|...++ .+.+.||+.-.+.+.+++ +|.|++.|.-.|
T Consensus 94 ~l~VP~G~~Vr~~vTS~DV---iHsf~IP~lgi----------------k~da~PG~~n~~~~~~~k-pG~y~g~Cse~C 153 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPDV---IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQYC 153 (168)
T ss_dssp SEEEETTSEEEEEEECSSS---CEEEEETTSSC----------------EEEECTTBCEEEEEECCS-CEEEEEECCSCC
T ss_pred EEEEeCCCeEEEEEecCCc---eEEEEECCCCe----------------EEEecCCceeEEEEEeCC-CEEEEEECCcCC
Confidence 6899999999999999742 45666655433 234678998889999987 799999997655
|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=91.37 E-value=1 Score=37.09 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred cCcEE--EEEEEccCCCceeEEEEecccceEE--EccCCCcce--------eeEecEEEecCCceEEEEEecCC--CCce
Q psy16562 273 RDKRY--LMRIIGGSCLACPLIFTIEKHQLQV--IASDGTAVE--------PLVVDSVTLFPGDRVDVIIHTNQ--SNNL 338 (445)
Q Consensus 273 ~G~~~--rlRliN~~~~~~~~~~~i~gh~~~v--ia~DG~~v~--------P~~~~~~~I~pGeR~dv~v~~~~--~~G~ 338 (445)
.|+.+ .|.+.|.+...+.+.|. .|+.+.+ ...+|..+- +.......|.|||...|....++ .||+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~-Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFS-TGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEES-SSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeC-CCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 46778888765554444 4555444 444565542 23457889999999999999884 4799
Q ss_pred EEEEEEec
Q psy16562 339 YWMQAKTL 346 (445)
Q Consensus 339 y~~~~~~~ 346 (445)
|.+++...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99988655
|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
Probab=90.76 E-value=0.23 Score=41.06 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=37.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|.. ... +|.+.... | .+ |.....+.+.||+++.+.| ++ +|.|+|.|..
T Consensus 20 P~~i~V~~GdtV~f~n--~d~----------~H~v~~~~--~-~~-p~~~~~~~~~~g~t~~~tF--~~-~G~y~y~C~~ 80 (122)
T 2ux6_A 20 PASLKVAPGDTVTFIP--TDK----------GHNVETIK--G-MI-PDGAEAFKSKINENYKVTF--TA-PGVYGVKCTP 80 (122)
T ss_dssp SSEEEECTTEEEEEEE--SSS----------SCCCEECT--T-CS-CTTCCCCBCCTTCCEEEEE--CS-CEEEEEEETT
T ss_pred CCEEEECCCCEEEEEE--CCC----------CcEEEEcc--c-cc-CCCcceeecCCCCEEEEEe--CC-CEEEEEEeCC
Confidence 4589999999988864 332 23333321 1 00 1111223457999988777 44 7999999954
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 445 | ||||
| d1hfua1 | 131 | b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprin | 2e-36 | |
| d1gyca1 | 130 | b.6.1.3 (A:1-130) Laccase {Trametes versicolor, la | 2e-36 | |
| d1v10a1 | 136 | b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [T | 7e-36 | |
| d1aoza1 | 129 | b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cuc | 2e-33 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 5e-33 | |
| d1gyca2 | 170 | b.6.1.3 (A:131-300) Laccase {Trametes versicolor, | 6e-08 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 2e-31 | |
| d1hfua2 | 172 | b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Copr | 2e-07 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 3e-31 | |
| d1v10a2 | 168 | b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus | 5e-09 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 4e-31 | |
| d2q9oa2 | 181 | b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyce | 4e-09 | |
| d2q9oa1 | 162 | b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces | 5e-27 | |
| d1sdda1 | 180 | b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos t | 5e-23 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 9e-23 | |
| d1aoza2 | 209 | b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (C | 6e-07 | |
| d1kbva1 | 151 | b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisser | 1e-22 | |
| d2j5wa1 | 192 | b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapie | 8e-22 | |
| d1oe2a1 | 159 | b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcalige | 1e-21 | |
| d2j5wa3 | 207 | b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sap | 4e-21 | |
| d1gska1 | 181 | b.6.1.3 (A:2-182) Spore coat protein A, CotA {Baci | 7e-21 | |
| d1kv7a1 | 140 | b.6.1.3 (A:31-170) multi-copper oxidase CueO {Esch | 2e-20 | |
| d2bw4a1 | 157 | b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcalige | 5e-19 | |
| d1e30a_ | 153 | b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidan | 2e-17 | |
| d1mzya1 | 153 | b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodoba | 2e-17 | |
| d2j5wa4 | 179 | b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sap | 7e-17 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 1e-15 | |
| d1kv7a2 | 165 | b.6.1.3 (A:171-335) multi-copper oxidase CueO {Esc | 8e-06 | |
| d2j5wa5 | 149 | b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sa | 8e-15 | |
| d1sddb2 | 139 | b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (B | 4e-14 | |
| d1sdda2 | 116 | b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos | 9e-14 | |
| d2j5wa2 | 145 | b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sap | 3e-13 | |
| d1kcwa2 | 146 | b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sap | 3e-12 | |
| d1gska2 | 174 | b.6.1.3 (A:183-356) Spore coat protein A, CotA {Ba | 6e-12 | |
| d1sddb1 | 67 | b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (B | 8e-07 | |
| d1kbva2 | 151 | b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisse | 8e-06 |
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 128 bits (323), Expect = 2e-36
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKV 144
V+ DGF RA + +N GP I+ K D ++V N + + R ++HWHG++Q+
Sbjct: 14 ANVSPDGFTRAGILVNGV-HGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRG 72
Query: 145 TPWMDGVPMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
T W DG V QCPI F YKF A +GTF+YHSH G Q DGL G M+I
Sbjct: 73 TNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 130 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 128 bits (322), Expect = 2e-36
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTP 146
V+ DGF R + +N P P I KGD ++V + + + + ++HWHG +Q T
Sbjct: 15 VSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTN 74
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
W DG V QCPI S +F Y F +GTF+YHSH+ Q DGL G ++ PK
Sbjct: 75 WADGPAFVNQCPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK 130
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 136 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 127 bits (319), Expect = 7e-36
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 91 VTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHM----IDREVTLHWHGVYQKVT 145
+ DG R+ ++ P I D ++V + + + R ++HWHG +Q T
Sbjct: 14 LDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGT 73
Query: 146 PWMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTAD 204
MDG V QCPI + +F Y F +GT++YHSH+ Q DGL G+ ++ P D
Sbjct: 74 TEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN--D 131
Query: 205 PHAEL 209
PH L
Sbjct: 132 PHLSL 136
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 129 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 120 bits (302), Expect = 2e-33
Identities = 45/111 (40%), Positives = 67/111 (60%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ E ++ IN Q PGP+I+ GD+++V++ N + V +HWHG+ Q+ TPW DG
Sbjct: 15 WAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADG 74
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201
++QC I TF Y F GTFFYH H+G+Q+ GL GS+I+ P+
Sbjct: 75 TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 120 bits (302), Expect = 5e-33
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPR 263
DPHA YD D S VI +TDW H+ + DA LING ++ ++P
Sbjct: 1 DPHASRYDVDNESTVITLTDWYHT------AARLGPRFPLGADATLINGLGRS--ASTPT 52
Query: 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323
+ VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+ +F
Sbjct: 53 AALAVINVQHGKRYRFRLVSISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAA 111
Query: 324 DRVDVIIHTNQSNNLYWMQAKTLCDSI-----TAEAVLQYEG 360
R +++ NQ+ YW++A ++ A+L+Y+G
Sbjct: 112 QRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRYQG 153
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} Length = 170 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Score = 50.1 bits (119), Expect = 6e-08
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 382 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSV 441
++P + VQ KRY R++ SC F+I+ H L VI DG +PL+VDS+
Sbjct: 48 ASTPTAALAVINVQHGKRYRFRLVSISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSI 106
Query: 442 TLFP 445
+F
Sbjct: 107 QIFA 110
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 116 bits (291), Expect = 2e-31
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRV 264
PHA LYD D + +I + DW H S +PDA LING+ + P
Sbjct: 1 PHAALYDEDDENTIITLADWYHIPAPSIQGAA-------QPDATLINGKGRYV--GGPAA 51
Query: 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324
+ V++ K+Y MR+I SC F+I+ H+L +I DG EP VD + +F G
Sbjct: 52 ELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQ 110
Query: 325 RVDVIIHTNQSNNLYWMQAKTLC---------DSITAEAVLQYEG 360
R ++ NQ + YW++A+ + A+L+Y G
Sbjct: 111 RYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAG 155
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} Length = 172 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Score = 48.9 bits (116), Expect = 2e-07
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 369 RPKSDSFPRGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS 428
+P + P + V++ K+Y MR+I SC F+I+ H+L +I
Sbjct: 33 QPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCD-PNWQFSIDGHELTIIEV 91
Query: 429 DGTAVEPLVVDSVTLFP 445
DG EP VD + +F
Sbjct: 92 DGELTEPHTVDRLQIFT 108
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 115 bits (289), Expect = 3e-31
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
YD D S VI + DW HS++ FP PD LING +N + S +
Sbjct: 1 YDVDDASTVITIADWYHSLSTVLFPNPNKAPPA--PDTTLINGLGRNSANPSAG-QLAVV 57
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVI 329
VQ KRY RI+ SC F+I+ H++ VI DG + +PL VDS+T+F G R V+
Sbjct: 58 SVQSGKRYRFRIVSTSCF-PNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVV 116
Query: 330 IHTNQSNNLYWMQA-----KTLCDSITAEAVLQYEG 360
+ NQ+ YW++A + A+ +Y+G
Sbjct: 117 VEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQG 152
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} Length = 168 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Score = 53.2 bits (127), Expect = 5e-09
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 377 RGKPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL 436
G+ N + VQ KRY RI+ SC F+I+ H++ VI DG + +PL
Sbjct: 42 LGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCF-PNYAFSIDGHRMTVIEVDGVSHQPL 100
Query: 437 VVDSVTLFP 445
VDS+T+F
Sbjct: 101 TVDSLTIFA 109
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 115 bits (289), Expect = 4e-31
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 20/187 (10%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
YD DL V +TD+ + D N D +LING NP N+
Sbjct: 1 YDIDL--GVFPITDYYYRAADDLVHFTQNNAPPF-SDNVLINGTAVNP--NTGEGQYANV 55
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVI 329
+ KR+ +RI+ S ++ H + VIA+D V + VDS+ L G R DV+
Sbjct: 56 TLTPGKRHRLRILNTST-ENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVV 114
Query: 330 IHTNQSNNLYWMQAKTLC-------DSITAEAVLQYEGEKLTYVSKRPKSDSFPRGKPKD 382
I +++ + YW + A+ Y G P + P P D
Sbjct: 115 IDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP----GGLPTDEGTP---PVD 167
Query: 383 NSPRVPM 389
+ +
Sbjct: 168 HQCLDTL 174
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 53.9 bits (129), Expect = 4e-09
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 378 GKPKD-NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPL 436
G + N+ + KR+ +RI+ S ++ H + VIA+D V +
Sbjct: 40 GTAVNPNTGEGQYANVTLTPGKRHRLRILNTST-ENHFQVSLVNHTMTVIAADMVPVNAM 98
Query: 437 VVDSVTLFP 445
VDS+ L
Sbjct: 99 TVDSLFLAV 107
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Score = 104 bits (259), Expect = 5e-27
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 89 GCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW 147
+ DG + ++ IN + GP+I GDT+ V V N+++ ++HWHG++QK T
Sbjct: 45 NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNL 104
Query: 148 MDGVPMVTQC-PIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKTA 203
DG VT+C P Y++ A GT +YHSH Q +G+ G++ I P +
Sbjct: 105 HDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPASL 161
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 180 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 93.6 bits (232), Expect = 5e-23
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVY----QKVTPWMDGVPMVTQC--PIP 160
L GP++ GD + V KN + +++H G+ + + D + + +
Sbjct: 57 LLGPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVA 115
Query: 161 SSTTFRYKFPA----------MPSGTFFYHSHVGLQK--MDGLEGSMIIRTPKTADPHAE 208
+ Y++ P T Y+S+V L + GL G ++I T
Sbjct: 116 PGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175
Query: 209 LYDFD 213
F+
Sbjct: 176 QKMFE 180
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 93.4 bits (231), Expect = 9e-23
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTR--IKPDAILINGQNQNPKDNSPRVPMH 267
+ +D ++++DW H + G + R +P IL+NG+ Q + + +
Sbjct: 2 FHYD-GEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSN 60
Query: 268 F---------------FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEP 312
F V K Y +RI + L L F I HQL V+ +DG V+P
Sbjct: 61 LEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQP 119
Query: 313 LVVDSVTLFPGDRVDVIIHTNQSN-NLYWMQAKTLC---DSITAEAVLQYEGEKLTYVSK 368
+ ++ G+ V+I T+Q+ YW+ T ++ +L Y ++ +
Sbjct: 120 FYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPT 179
Query: 369 RPK 371
P
Sbjct: 180 SPP 182
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} Length = 209 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Score = 47.9 bits (113), Expect = 6e-07
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 383 NSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVT 442
S + F V K Y +RI + L L F I HQL V+ +DG V+P +
Sbjct: 68 GSESCAPYIFHVSPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDID 126
Query: 443 LFP 445
++
Sbjct: 127 IYS 129
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 91.3 bits (226), Expect = 1e-22
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
DG E + + +PG I+V +GDT+ V+ N+ + H V G
Sbjct: 41 DDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNP----SSTVPHNVDFHAATGQGG-- 94
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV---GLQKMDGLEGSMIIRTPKTADPH 206
T + F A+ G + YH V G+ +G+ G +++ PK P
Sbjct: 95 GAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVE-PKEGLPK 150
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (224), Expect = 8e-22
Identities = 27/120 (22%), Positives = 37/120 (30%), Gaps = 19/120 (15%)
Query: 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVT----PWMDGVP--MVTQCPIP 160
GP I+ GD + V +KN T H HG+ + D +
Sbjct: 73 FLGPIIKAETGDKVYVHLKNLASR-PYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVY 131
Query: 161 SSTTFRYKFPA----------MPSGTFFYHSHVGL--QKMDGLEGSMIIRTPKTADPHAE 208
+ Y A T YHSH+ GL G +II + D E
Sbjct: 132 PGEQYTYMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKE 191
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 159 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 89.4 bits (221), Expect = 1e-21
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 10/112 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ G ++ N +PGP++ V +GD + + + N H V
Sbjct: 46 IDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT----NAMPHNVEFHGATGAL- 100
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIR 198
+ +F A SGTF YH V + G+ G++++
Sbjct: 101 -GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVL 151
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 207 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.0 bits (220), Expect = 4e-21
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 23/132 (17%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGV----------YQKVTP 146
ER + + GP I GDTI V N +++ GV Y
Sbjct: 73 ERGPEEEHLGILGPVIWAEVGDTIRVTFHNKG-AYPLSIEPIGVRFNKNNEGTYYSPNYN 131
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPAMPSG----------TFFYHSHVGLQK--MDGLEGS 194
+ + + TF Y++ Y+S V K GL G
Sbjct: 132 PQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGP 191
Query: 195 MIIRTPKTADPH 206
M I + +
Sbjct: 192 MKICKKGSLHAN 203
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 181 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 87.6 bits (216), Expect = 7e-21
Identities = 26/140 (18%), Positives = 43/140 (30%), Gaps = 29/140 (20%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMI--------------------- 129
+ D + N PGP+I+V + + + V N++
Sbjct: 38 LHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEP 97
Query: 130 DREVTLHWHGVYQKVTPWMDGVPMVTQCPI---PSSTTFRYKFPA-MPSGTFFYHSH--- 182
+ + +H HG ++ P Y +P +YH H
Sbjct: 98 EVKTVVHLHGGVTPDDSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMA 157
Query: 183 -VGLQKMDGLEGSMIIRTPK 201
L GL G+ II PK
Sbjct: 158 LTRLNVYAGLVGAYIIHDPK 177
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 140 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 84.8 bits (209), Expect = 2e-20
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 87 RKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP 146
G T G N L GP++++ +G + VD+ N + + E TLHWHG+
Sbjct: 23 GAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTE-ETTLHWHGLEV--PG 79
Query: 147 WMDGVPMVTQCPIPSSTTFRYKFPA-MPSGTFFYHSH----VGLQKMDGLEGSMIIRTP 200
+DG P Q IP P+ T ++H H G Q GL G ++I
Sbjct: 80 EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDD 135
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} Length = 157 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Score = 81.7 bits (201), Expect = 5e-19
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 91 VTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG 150
+ +G E ++ N +PGP + V + D + + + N + H + G
Sbjct: 45 IDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP----DTNTLLHNIDFHAATGALG 100
Query: 151 VPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH----VGLQKMDGLEGSMIIR 198
+TQ + +F A G F YH V G+ G++++
Sbjct: 101 GGALTQ--VNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVL 150
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Score = 77.2 bits (189), Expect = 2e-17
Identities = 13/108 (12%), Positives = 30/108 (27%), Gaps = 6/108 (5%)
Query: 96 FERAILSINRQLPGPSIQVCKGDTIIVDVKN--HMIDREVTLHWHG--VYQKVTPWMDGV 151
F ++ + P++++ G T+ V N + G
Sbjct: 47 FPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVA 105
Query: 152 PMVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
F +GT++Y + G G ++++
Sbjct: 106 GTGFSPVPKDGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} Length = 153 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 76.7 bits (188), Expect = 2e-17
Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 11/110 (10%)
Query: 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP 152
+ ++ + +PGP + V +GD + + + N H + G
Sbjct: 45 DEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPP----ENTMPHNIDFHAATGALGGG 100
Query: 153 MVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVG-----LQKMDGLEGSMII 197
+T I +F A +G F YH G + G+ G +++
Sbjct: 101 GLT--LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMV 148
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (187), Expect = 7e-17
Identities = 25/114 (21%), Positives = 37/114 (32%), Gaps = 22/114 (19%)
Query: 97 ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ 156
ER + + GP + GD + + KN R ++H HGV T
Sbjct: 73 ERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHGVQ---------TESSTV 122
Query: 157 CPIPSSTTFRYKFPAM----------PSGTFFYHSHVGLQK--MDGLEGSMIIR 198
P T Y + + Y+S V K GL G +I+
Sbjct: 123 TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVC 176
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 72.0 bits (176), Expect = 1e-15
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 211 DFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRI--KPDAILINGQNQNPKDNSPRVPMHF 268
+ + +IV D S + D +L NG
Sbjct: 5 QWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-----------IYPQ 53
Query: 269 FKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVD 327
R +R++ G T + L VIASDG + EP+ V + + G+R +
Sbjct: 54 HAAPRG-WLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFE 112
Query: 328 VIIHTNQSNNLYWM 341
V++ N + +
Sbjct: 113 VLVEVNDNKPFDLV 126
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} Length = 165 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Score = 43.5 bits (102), Expect = 8e-06
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 387 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-EPLVVDSVTLFP 445
R +R++ G T + L VIASDG + EP+ V + +
Sbjct: 49 AIYPQHAAPRG-WLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 107
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 149 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.4 bits (169), Expect = 8e-15
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 3/100 (3%)
Query: 100 ILSINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQC 157
+ +IN ++ G + + GD + + + ++ H GV
Sbjct: 48 MHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLH-TVHFHGHSFQYKHRGVYSSDVF 106
Query: 158 PIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
I T + G + H HV G+E + +
Sbjct: 107 DIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 146
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 139 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.1 bits (163), Expect = 4e-14
Identities = 13/120 (10%), Positives = 35/120 (29%), Gaps = 1/120 (0%)
Query: 78 LKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHW 137
R+ P +++ + + + + + N R++
Sbjct: 20 YDKKPTRSWRRASSEVKNSHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIH-VV 78
Query: 138 HGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMII 197
H Q + + P+ + + A G + + VG + G++ +I
Sbjct: 79 HFHGQTLLENGTQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLI 138
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 116 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 65.5 bits (159), Expect = 9e-14
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREV-TLHWHGVYQKVTPWMDGVPMVTQCP 158
++N + G P I VC D I + E+ ++H++G ++
Sbjct: 25 TVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNG-----QVLEQNHHKISAIT 79
Query: 159 IPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEG 193
+ S+T+ P G + S + G++
Sbjct: 80 LVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 114
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 145 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.8 bits (157), Expect = 3e-13
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI 159
S+N + G P + +CKGD+++ + + + HG+Y ++ +
Sbjct: 49 SMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEA----DVHGIYFSGNTYLWRGERRDTANL 104
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
T+ GTF G++ +
Sbjct: 105 FPQTSLTLHMWPDTEGTFNVECLTTDHYTGGMKQKYTVN 143
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (149), Expect = 3e-12
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 6/99 (6%)
Query: 102 SINRQLPG--PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPI 159
S+N G P + +C D + + + H + + + +
Sbjct: 50 SVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEV----DVHAAFFHGQALTNKNYRIDTINL 105
Query: 160 PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIR 198
+T F A G + GL+ ++
Sbjct: 106 FPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQ 144
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} Length = 174 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Score = 61.7 bits (149), Expect = 6e-12
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 211 DFDLYSHVIIVTDWMHSMTDS-KFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFF 269
++D+ +++TD + S +P N + P+ ++ +
Sbjct: 6 EYDV---PLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGE-TILVNGKVWPYL 61
Query: 270 KVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDV 328
+V+ +Y R+I S + I SDG + + ++S +L P +R D+
Sbjct: 62 EVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDI 120
Query: 329 IIHTNQSNNLYWM 341
II +
Sbjct: 121 IIDFTAYEGESII 133
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 67 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.2 bits (104), Expect = 8e-07
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 12/64 (18%)
Query: 158 PIPSSTTFRYKFPAMPSG----------TFFYHSHV--GLQKMDGLEGSMIIRTPKTADP 205
I + T+ Y + A + Y+S V GL G ++I T D
Sbjct: 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK 61
Query: 206 HAEL 209
+
Sbjct: 62 ETNM 65
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} Length = 151 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Score = 43.6 bits (102), Expect = 8e-06
Identities = 14/100 (14%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
Query: 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG----VPMVTQCPIPSSTTF 165
+++ G+T+ + V N + + H G +++G V +P+ +
Sbjct: 51 NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSA 109
Query: 166 RYKFPAMPSGTFFYHSHVGLQKMD-GLEGSMIIRTPKTAD 204
+F G + H + + G G + + + +
Sbjct: 110 IVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAENPE 149
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 445 | |||
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 100.0 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 100.0 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 100.0 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 100.0 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 100.0 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 100.0 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.97 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.97 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.97 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.97 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.97 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.96 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 99.96 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.96 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.94 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.92 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.89 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.87 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.85 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 99.84 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.82 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.73 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.72 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.72 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.6 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 99.57 | |
| d1kbva2 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 99.56 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 99.52 | |
| d1sddb2 | 139 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.46 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.38 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 99.38 | |
| d1v10a1 | 136 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 99.36 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.35 | |
| d2j5wa5 | 149 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.23 | |
| d1kv7a1 | 140 | multi-copper oxidase CueO {Escherichia coli [TaxId | 99.19 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.17 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 99.13 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 99.11 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.11 | |
| d2q9oa2 | 181 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 99.11 | |
| d1hfua2 | 172 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 99.09 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.09 | |
| d1gyca2 | 170 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 99.06 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.05 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.05 | |
| d1sdda2 | 116 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 99.02 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 99.02 | |
| d2bw4a2 | 173 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 99.02 | |
| d1v10a2 | 168 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.99 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 98.95 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.94 | |
| d1aoza2 | 209 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.92 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.89 | |
| d1kv7a3 | 181 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.85 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.83 | |
| d1gska1 | 181 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.79 | |
| d1oe1a2 | 177 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 98.71 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.66 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.6 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.59 | |
| d1gska3 | 154 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.59 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 98.55 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 98.45 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 98.44 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 98.41 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 98.31 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 98.29 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.27 | |
| d2j5wa3 | 207 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.27 | |
| d1hfua3 | 200 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 98.23 | |
| d1sdda1 | 180 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 98.21 | |
| d1gska2 | 174 | Spore coat protein A, CotA {Bacillus subtilis [Tax | 98.19 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.19 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 98.19 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.18 | |
| d1kv7a2 | 165 | multi-copper oxidase CueO {Escherichia coli [TaxId | 98.15 | |
| d2j5wa1 | 192 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.13 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 98.12 | |
| d2j5wa4 | 179 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 98.11 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.11 | |
| d1v10a3 | 190 | Laccase {Rigidoporus lignosus [TaxId: 219653]} | 98.05 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 98.04 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 98.01 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 97.99 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 97.95 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 97.93 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 97.93 | |
| d1aoza3 | 214 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 97.9 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 97.85 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 97.84 | |
| d1gyca3 | 199 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 97.82 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 97.79 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 97.61 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.53 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.53 | |
| d2q9oa3 | 216 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 97.5 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.46 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 97.45 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.42 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 97.41 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 97.4 | |
| d1mzya2 | 178 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 97.18 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 96.08 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 95.95 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 95.8 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 95.65 | |
| d1sddb1 | 67 | Coagulation factor V {Cow (Bos taurus) [TaxId: 991 | 95.55 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 95.43 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 95.33 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 95.28 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 95.2 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 94.83 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 94.1 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 93.96 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 93.6 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 93.28 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 91.66 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 90.95 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 90.02 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 89.24 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 86.54 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 86.51 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 85.01 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 83.47 |
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=100.00 E-value=1.2e-39 Score=279.03 Aligned_cols=126 Identities=37% Similarity=0.790 Sum_probs=119.4
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
.++|+|+|+|++. .+++||.++.+|+|||++|||+|+|++||+|+|+|.|+|+.++++
T Consensus 1 ~~~~~~~~~v~~~----------------------~~~pdg~~~~~~~~NG~~PGP~i~v~~GD~v~i~l~N~l~~~~~~ 58 (129)
T d1aoza1 1 SQIRHYKWEVEYM----------------------FWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVV 58 (129)
T ss_dssp CCEEEEEEEEEEE----------------------EECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBC
T ss_pred CcEEEEEEEEEEE----------------------EECCCCeEEEEEEECCCcCCCeEEEECCcEEEEEEEeCCCCCCee
Confidence 3789999999974 357899999999999999999999999999999999999878999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPKT 202 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~~ 202 (445)
|||||+++...+++||+++++||+|+||++++|+|.++++||||||||++.|+.+||+|+|||+++++
T Consensus 59 iH~Hg~~~~~~~~~~~~~~~~~~~I~PG~s~~y~f~a~~~Gt~~YH~H~~~h~~~Gm~G~~iV~~~~~ 126 (129)
T d1aoza1 59 IHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQG 126 (129)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTT
T ss_pred eeeccceeeccCccccccccccceECCCCEEEEEEECCCCCceEEecCCHHHHhCCCEEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998864
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=100.00 E-value=3.9e-39 Score=276.88 Aligned_cols=113 Identities=34% Similarity=0.655 Sum_probs=106.1
Q ss_pred eeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCC
Q psy16562 89 GCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSST 163 (445)
Q Consensus 89 ~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~ 163 (445)
.++.+||. ++.+|+|||++|||+|++++||+|+|+|+|+|+. ++|||||||+++..++++||++++|||+|.||+
T Consensus 12 ~~~~pdG~~~~~~~~~nG~~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~~~t~~~I~PG~ 91 (136)
T d1v10a1 12 ANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNE 91 (136)
T ss_dssp EEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTE
T ss_pred EEECCCCcceeEEEEECCCccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCCCccccceECCCC
Confidence 35789995 7899999999999999999999999999999863 689999999999999999999999999999999
Q ss_pred ceEEEEecC-CCcceEEecccchhhhcCceeEEEEeCCC
Q psy16562 164 TFRYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 164 ~~~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~ 201 (445)
+|+|+|+++ ++||||||||++.|+.+||+|+|||++++
T Consensus 92 ~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~~~ 130 (136)
T d1v10a1 92 SFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 130 (136)
T ss_dssp EEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred eEEEEEECCCCccceEEecCchhHHhCCCEEEEEECCCc
Confidence 999999996 69999999999999999999999999873
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=100.00 E-value=1.7e-37 Score=265.06 Aligned_cols=112 Identities=43% Similarity=0.789 Sum_probs=104.9
Q ss_pred eeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCc
Q psy16562 89 GCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTT 164 (445)
Q Consensus 89 ~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~ 164 (445)
..+++||+++.++++|| +|||+|+|++||+|+|+|+|+|+. ++++|||||++++.++++||+++++||||.||++
T Consensus 14 ~~i~pdG~~~~~~~~nG-~pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv~g~~~~~I~PG~~ 92 (131)
T d1hfua1 14 ANVSPDGFTRAGILVNG-VHGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHA 92 (131)
T ss_dssp EEECTTSCCEEEEEETT-BSSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCE
T ss_pred EEEcCCCeEeeEEEECC-cCCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCCcccccceECCCCe
Confidence 35789999999999999 899999999999999999999973 4689999999999999999999999999999999
Q ss_pred eEEEEec-CCCcceEEecccchhhhcCceeEEEEeCCC
Q psy16562 165 FRYKFPA-MPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 165 ~~Y~f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~ 201 (445)
|+|+|.+ +++||||||||++.|+++||+|+|||++++
T Consensus 93 ~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (131)
T d1hfua1 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (131)
T ss_dssp EEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEcCCC
Confidence 9999995 589999999999999999999999999863
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=100.00 E-value=3.8e-37 Score=262.94 Aligned_cols=111 Identities=40% Similarity=0.801 Sum_probs=105.9
Q ss_pred eecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcccccCCCCCCce
Q psy16562 90 CVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 90 ~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
.+.+||..+.+|+|||++|||+|++++||+|+|+|+|+++. +++++||||+++..++++||+++++||+|.||++|
T Consensus 14 ~i~p~G~~~~~~~~ng~~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~~~~~s~~~i~PG~s~ 93 (130)
T d1gyca1 14 PVSPDGFLRDAIVVNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSF 93 (130)
T ss_dssp EECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEE
T ss_pred EECCCCEEEEEEEECCcccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCCccccccCCCCCCCeE
Confidence 57889999999999999999999999999999999999763 67899999999999999999999999999999999
Q ss_pred EEEEecC-CCcceEEecccchhhhcCceeEEEEeCC
Q psy16562 166 RYKFPAM-PSGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 166 ~Y~f~~~-~~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
+|+|+++ ++||||||||++.|+++||+|+|||++|
T Consensus 94 ~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~~p 129 (130)
T d1gyca1 94 LYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (130)
T ss_dssp EEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred EEEEECCCCCceeEEecCCHHHHhCCCEEEEEEeCC
Confidence 9999986 7999999999999999999999999987
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=100.00 E-value=1.3e-36 Score=269.83 Aligned_cols=126 Identities=35% Similarity=0.612 Sum_probs=116.4
Q ss_pred ceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCe-EEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 56 LVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGF-ERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 56 ~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
++++|+|++++.. ..+.+||. ++.+|+|||++|||+|+|++||+|+|+|+|+|+.+.++
T Consensus 32 ~~~~y~l~~~~~~--------------------~~~~pdG~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~l~N~l~~~~~~ 91 (162)
T d2q9oa1 32 VTQSYVFNLTEVD--------------------NWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTS 91 (162)
T ss_dssp CEEEEEEEEEEEE--------------------EEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBC
T ss_pred eEEEEEEEEEEEE--------------------eeECCCCCcceeEEEECCcccCCeEEEECCcEEEEEEEecCcccccc
Confidence 5889999999753 46788985 56799999999999999999999999999999878899
Q ss_pred EeeCCcccCCCCCCCCCCcccccCC-CCCCceEEEEecCCCcceEEecccchhhhcCceeEEEEeCCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPI-PSSTTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI-~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~~ 201 (445)
|||||+++..++++||++.++||+| +||++++|.|.+.++||||||||++.|+++||+|+|||++|+
T Consensus 92 ih~Hg~~~~~~~~~~g~~~~~~~~i~~pg~~~~y~f~~~~~Gt~wYH~H~~~q~~~Gl~G~~iV~~p~ 159 (162)
T d2q9oa1 92 IHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPA 159 (162)
T ss_dssp EEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred cccccccccCCCcCCCCcccccceecCCCCEEEeeecCCCCEEEEeecCCHHHHhCCCEEEEEECCCC
Confidence 9999999999999999999999998 569999999999999999999999999999999999999874
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2e-33 Score=242.60 Aligned_cols=119 Identities=28% Similarity=0.424 Sum_probs=105.0
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCce
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVT 134 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~ts 134 (445)
....+|+++++..+ +..+|.+..+|+|||++|||+|+|++||+|+|++.|+|+ ++++
T Consensus 13 ~~~~~~~l~~~~~~----------------------~~~~G~~~~~~~~NG~~PGP~i~~~~Gd~v~v~~~N~l~-~~~s 69 (140)
T d1kv7a1 13 DARNRIQLTIGAGQ----------------------STFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLT-EETT 69 (140)
T ss_dssp CTTSEEEEEEEEEE----------------------EEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSS-SCBC
T ss_pred CCceEEEEEEEEEE----------------------EecCCEEEEEEEECCccCCceEEEECCCEEEEEEEeCcc-cccc
Confidence 34567888887643 234899999999999999999999999999999999999 8999
Q ss_pred EeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-CcceEEeccc----chhhhcCceeEEEEeCCC
Q psy16562 135 LHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-SGTFFYHSHV----GLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 135 iHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~ 201 (445)
|||||+++.. .+||++ |++|.||++++|+|.+.+ +||||||||. +.|+++||+|+|||++++
T Consensus 70 iH~HG~~~~~--~~dG~~---~~~i~pg~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~~~e 136 (140)
T d1kv7a1 70 LHWHGLEVPG--EVDGGP---QGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 136 (140)
T ss_dssp CEEETCCCCG--GGSCCT---TCCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred EeeeeeecCC--ccCCCc---cceEccCCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEECCcc
Confidence 9999999864 799986 679999999999999885 7999999995 589999999999999864
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=2e-31 Score=235.14 Aligned_cols=125 Identities=20% Similarity=0.324 Sum_probs=106.6
Q ss_pred CCCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 52 NAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 52 ~~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
.+.+++.+|+++++... ..+..+|....+|+|||++|||+|+|++||+|+|+|+|++.
T Consensus 27 ~~g~~~~~~~lt~~~~~--------------------~~~~~~g~~~~~~t~NG~~PGPtI~v~~Gd~v~v~~~N~~~-- 84 (159)
T d1oe2a1 27 KSGPKVVEFTMTIEEKK--------------------MVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT-- 84 (159)
T ss_dssp CCCCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT--
T ss_pred CCCCeEEEEEEEEEEEE--------------------EEECCCCcEEEEEEECCcCCCCeEEEECCcEEEEEEECCCc--
Confidence 34688999999999753 23446689999999999999999999999999999999985
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc----chhhhcCceeEEEEeCCCC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV----GLQKMDGLEGSMIIRTPKT 202 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~~ 202 (445)
++||||++..+ .++++.+.++++|+||++++|+|+++++||||||||. +.|+.+||+|+|||++++.
T Consensus 85 --~~h~h~ih~hg--~~~~~~g~~~~~I~PG~t~ty~f~a~~~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p~e~ 155 (159)
T d1oe2a1 85 --NAMPHNVEFHG--ATGALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDG 155 (159)
T ss_dssp --CCSCBCCEETT--SCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTC
T ss_pred --cccccceeecc--ccCCCCCcccccCCCCCeEEEEEEcCCCceEEEEeCCCCCchhHHhCCCEEEEEEECCCC
Confidence 45666666655 3677777889999999999999999999999999994 5799999999999987643
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.97 E-value=2e-31 Score=234.71 Aligned_cols=124 Identities=18% Similarity=0.328 Sum_probs=108.3
Q ss_pred CCCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 52 NAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 52 ~~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
.+.|++.+|+++++..+ ..+.++|..+.+|+|||++|||+|+|++||+|+|+|+|+
T Consensus 26 ~~~~~~~~~~l~~~~~~--------------------~~i~~~G~~~~~~~~NG~~PGP~I~v~~GD~V~i~l~N~---- 81 (157)
T d2bw4a1 26 KTGPRVVEFTMTIEEKK--------------------LVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINP---- 81 (157)
T ss_dssp SSSCCEEEEEEEEEEEE--------------------EECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEEC----
T ss_pred CCCCeEEEEEEEEEEEE--------------------EEECCCCeEEEEEEECCccCCceEEEECCcEEEEEEEeC----
Confidence 44688999999999753 245578999999999999999999999999999999996
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc----chhhhcCceeEEEEeCCC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV----GLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~----~~q~~~Gl~G~lIV~~~~ 201 (445)
.+++||||+++.+. ++|.+..++++|+||++++|+|++.++||||||||. +.|+.+||+|+|||++++
T Consensus 82 ~~~~~~Hg~~~h~~--~~~~~~~~~~~i~PGet~ty~f~a~~pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~p~e 153 (157)
T d2bw4a1 82 DTNTLLHNIDFHAA--TGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRD 153 (157)
T ss_dssp TTCCSCBCCEETTS--CSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTB
T ss_pred CCCcceEeeeeccc--CCCcCCcceeeECcCCEEeEEEECCCCccceEEECCCCchHHHHhCCCEEEEEEeCCC
Confidence 45789999998774 566666777899999999999999999999999994 689999999999998764
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.97 E-value=2.4e-30 Score=230.21 Aligned_cols=152 Identities=35% Similarity=0.613 Sum_probs=128.2
Q ss_pred CCCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEc
Q psy16562 204 DPHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIG 283 (445)
Q Consensus 204 ~p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN 283 (445)
+|+...||+|..|++|+|+||+|..... .......++..+|||++...+ ....+.+.|+|++|++|||||||
T Consensus 1 dP~~~~YD~D~ee~vi~lsDWyh~~~~~------~~~~~~~~d~~liNG~g~~~~--~~~~~~~~~~v~~g~~~rlRlIN 72 (170)
T d1gyca2 1 DPHASRYDVDNESTVITLTDWYHTAARL------GPRFPLGADATLINGLGRSAS--TPTAALAVINVQHGKRYRFRLVS 72 (170)
T ss_dssp CTTGGGCSBCSGGGEEEEEEECSSCTTT------SCSSCSSCSEEEETTBCCBTT--CTTSCCCEEEECTTCEEEEEEEE
T ss_pred CCccccCCCCCCceEEEEeecCCChhhh------cccCCCcCCcccccCccccCC--CCCCCceEEEECCCCEEEEEEee
Confidence 4677789999888999999999975532 122234678999999987543 23456789999999999999999
Q ss_pred cCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C---CCceeeEEEEE
Q psy16562 284 GSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C---DSITAEAVLQY 358 (445)
Q Consensus 284 ~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~---~~~~~~ail~y 358 (445)
+++. +.+.|+|++|.|+||++||.+++|..++++.|++||||||+|++++.+|+|||++... | ......|||+|
T Consensus 73 ~~~~-~~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~gqRydvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y 151 (170)
T d1gyca2 73 ISCD-PNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANPNFGTVGFAGGINSAILRY 151 (170)
T ss_dssp CCSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEE
T ss_pred cCCC-ceeeEEeCCCeEEEEEeCCeeccceEeeEEEecCCeEEEEEEeCCCCCCcEEEEEeccccccccCCCeeEEEEEE
Confidence 9987 5899999999999999999999999999999999999999999999899999999876 4 33455799999
Q ss_pred cCCCCC
Q psy16562 359 EGEKLT 364 (445)
Q Consensus 359 ~~~~~~ 364 (445)
.+++..
T Consensus 152 ~~a~~~ 157 (170)
T d1gyca2 152 QGAPVA 157 (170)
T ss_dssp TTSCSS
T ss_pred CCCCCC
Confidence 887653
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.97 E-value=1.9e-30 Score=231.53 Aligned_cols=149 Identities=34% Similarity=0.601 Sum_probs=126.0
Q ss_pred CCCCccccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEcc
Q psy16562 205 PHAELYDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGG 284 (445)
Q Consensus 205 p~~~~~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~ 284 (445)
|+...||+|..|++|+|+||+|+..... ..+..+++.+|||++.+.++ ...+.++|+|++|++|||||||+
T Consensus 1 P~~~~YD~dD~e~vl~l~DW~h~~~~~~-------~~~~~pd~~liNG~g~~~~~--~~~~~~~~~v~~g~~~rlR~iN~ 71 (172)
T d1hfua2 1 PHAALYDEDDENTIITLADWYHIPAPSI-------QGAAQPDATLINGKGRYVGG--PAAELSIVNVEQGKKYRMRLISL 71 (172)
T ss_dssp TTGGGCSBCSTTSEEEEEEECSSCGGGC-------C---CCSEEEETTBCCBTTC--CCCCCCEEEECTTCEEEEEEEEC
T ss_pred CCcccCCCCCCeEEEEEEECCCCChHHh-------hccCCCCcEEECccCccCCC--CCCCceEEEECCCCEEEEEEeee
Confidence 4567899988899999999999876552 13457899999999876432 23567899999999999999999
Q ss_pred CCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C-------CCceeeEE
Q psy16562 285 SCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C-------DSITAEAV 355 (445)
Q Consensus 285 ~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~-------~~~~~~ai 355 (445)
++. +.+.|+|++|.|+||++||++++|..++.+.|++||||||+|++++++|+|||++... | ......|+
T Consensus 72 ~~~-~~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~gqR~dvlv~~~~~~~~Y~ira~~~~~~~~~~~~~~~~~~~ai 150 (172)
T d1hfua2 72 SCD-PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAI 150 (172)
T ss_dssp CSS-CCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEE
T ss_pred cCC-ceEEEEeCCCeEEEEEeCCEEcccEEeceEeccCCeEEEEEEEcCCCCCcEEEEEEeccCcccccCcCCCceEEEE
Confidence 987 5899999999999999999999999999999999999999999999899999999876 3 23356799
Q ss_pred EEEcCCCC
Q psy16562 356 LQYEGEKL 363 (445)
Q Consensus 356 l~y~~~~~ 363 (445)
|+|.+...
T Consensus 151 L~Y~g~~~ 158 (172)
T d1hfua2 151 LRYAGAAN 158 (172)
T ss_dssp EEETTSCS
T ss_pred EEECCCCC
Confidence 99998754
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.97 E-value=2.4e-30 Score=229.77 Aligned_cols=150 Identities=36% Similarity=0.665 Sum_probs=123.7
Q ss_pred cccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
||+|..|++|+|+||+|+.....+... ......+++++|||++.+.++ ....+.++|+|++|++|||||||+++. +
T Consensus 1 YD~Dd~e~vi~lsDW~h~~~~~l~~~~--~~~~~~pd~~liNGkg~~~~~-~~~~~~~~~~v~~g~~~rlRlina~~~-~ 76 (168)
T d1v10a2 1 YDVDDASTVITIADWYHSLSTVLFPNP--NKAPPAPDTTLINGLGRNSAN-PSAGQLAVVSVQSGKRYRFRIVSTSCF-P 76 (168)
T ss_dssp CSBCSGGGEEEEEEECSSCCC---------CCCSCCSEEEETTBCCCSSC-GGGSCCCEEEECTTCEEEEEEEECCSS-C
T ss_pred CCCCCCccEEEEEECCCCCHHHHHhcc--CCCCCCCceeeecCCCCcCCC-CcCCCceEEEECCCCEEEEEEEecccC-c
Confidence 688877999999999998776643321 334567999999999876432 223456789999999999999999987 5
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CC---CceeeEEEEEcCCCC
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CD---SITAEAVLQYEGEKL 363 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~---~~~~~ail~y~~~~~ 363 (445)
.+.|+|++|.|+|||+||.+++|..++.+.|+|||||||+|++++++|+|||++... |. .....|||+|.+...
T Consensus 77 ~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~GqR~dvlv~~~~~~~~y~ira~~~~~~~~~~~~~~~aiL~Y~g~~~ 155 (168)
T d1v10a2 77 NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAV 155 (168)
T ss_dssp CEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCS
T ss_pred eEEEEECCCeEEEEEeCCeecCceEEeEEEEccCceEEEEEECCCCCCcEEEEEEeccCCCcCCCCceEEEEEECCCCC
Confidence 899999999999999999999999999999999999999999999899999999876 53 334579999998765
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.97 E-value=5.3e-30 Score=230.09 Aligned_cols=148 Identities=28% Similarity=0.391 Sum_probs=123.5
Q ss_pred cccCCcceEEEEeeeeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC 289 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~ 289 (445)
||.| +.+|+|+||+|+...+.+ ........+.++++||||++.+.+ ....+...|+|++|++|||||||+++. +
T Consensus 1 YD~D--~~vi~lsDW~h~~~~~~~-~~~~~~~~p~~d~~LINGkg~~~~--~~~~~~~~~~v~~g~~~rlR~iN~~~~-~ 74 (181)
T d2q9oa2 1 YDID--LGVFPITDYYYRAADDLV-HFTQNNAPPFSDNVLINGTAVNPN--TGEGQYANVTLTPGKRHRLRILNTSTE-N 74 (181)
T ss_dssp CSEE--EEEEEEEEECSSCHHHHH-HHHTTSCCCCBSEEEETTBCBCTT--TCCBCCCEEEECTTCEEEEEEEECCSS-C
T ss_pred CCcc--CeeEEEEecCCCCHHHHH-hhcccCCCCCcceEEECCcCCCCC--CCCCcceEEEECCCCEEEEEEecccCC-c
Confidence 5666 468999999998665422 222334456789999999987643 334566789999999999999999987 5
Q ss_pred eEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--C-----CCceeeEEEEEcCCC
Q psy16562 290 PLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--C-----DSITAEAVLQYEGEK 362 (445)
Q Consensus 290 ~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~-----~~~~~~ail~y~~~~ 362 (445)
.+.|+|++|.|+|||+||.+++|..++++.|+|||||||+|++++++|+|||++... | ....+.|||+|.+++
T Consensus 75 ~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~GqRydvlv~a~~~~~~Y~ir~~~~~~~~~~~~~~~~~~ail~Y~ga~ 154 (181)
T d2q9oa2 75 HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAP 154 (181)
T ss_dssp CEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSC
T ss_pred cEEEEECCceEEEEEeCCeEccceEeCEEEecCCcEEEEEEeCCCCCccEEEEEeccccccccCCCCCceEEEEEECCCC
Confidence 899999999999999999999999999999999999999999999999999999876 3 346678999999875
Q ss_pred C
Q psy16562 363 L 363 (445)
Q Consensus 363 ~ 363 (445)
.
T Consensus 155 ~ 155 (181)
T d2q9oa2 155 G 155 (181)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=2.2e-30 Score=233.77 Aligned_cols=126 Identities=26% Similarity=0.409 Sum_probs=106.0
Q ss_pred CceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC----
Q psy16562 55 PLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID---- 130 (445)
Q Consensus 55 p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~---- 130 (445)
+...+|+++++... ..+.+||.++.+|+|||++|||+|+|++||+|+|++.|+|+.
T Consensus 22 ~~~~~~~~~~~~~~--------------------~~~~p~~~~~~~~~ynG~~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~ 81 (181)
T d1gska1 22 KEKTYYEVTMEECT--------------------HQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFL 81 (181)
T ss_dssp SSCEEEEEEEEEEE--------------------ECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSS
T ss_pred CCceEEEEEEEEeE--------------------EEecCCCcceeEEEECCccCCCeEEEeCCeEEEEEEEeCCCcCccc
Confidence 45678999988653 345678888999999999999999999999999999999962
Q ss_pred -----------------CCceEeeCCcccCCCCCCCCCCc--ccccCC---CCCCceEEEEecC-CCcceEEeccc----
Q psy16562 131 -----------------REVTLHWHGVYQKVTPWMDGVPM--VTQCPI---PSSTTFRYKFPAM-PSGTFFYHSHV---- 183 (445)
Q Consensus 131 -----------------~~tsiHwHG~~~~~~~~~DGvp~--~tq~pI---~pG~~~~Y~f~~~-~~GT~wYH~H~---- 183 (445)
.+++|||||+++.. .+||.+. ++++.+ .+|++++|+|.++ ++||||||||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~--~~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t 159 (181)
T d1gska1 82 PIDHTIHHSDSQHEEPEVKTVVHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALT 159 (181)
T ss_dssp CCCTTCC-------CCSCCBCEEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTH
T ss_pred cccccccccccccccCCCcceeeeeccccCC--ccCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCc
Confidence 46999999999864 7999985 455544 5567779999997 57999999995
Q ss_pred chhhhcCceeEEEEeCCCC
Q psy16562 184 GLQKMDGLEGSMIIRTPKT 202 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~~~~~ 202 (445)
+.|+++||+|+|||+++++
T Consensus 160 ~~qv~~GL~G~~iV~d~~~ 178 (181)
T d1gska1 160 RLNVYAGLVGAYIIHDPKE 178 (181)
T ss_dssp HHHHHHTCEEEEEEECGGG
T ss_pred HHHHhcCCEEEEEECCccc
Confidence 5899999999999998754
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.96 E-value=7.3e-30 Score=223.84 Aligned_cols=123 Identities=15% Similarity=0.238 Sum_probs=102.3
Q ss_pred CCCCceEEEEEEEEEeeecCccccccCCCcccccccceeecCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCC
Q psy16562 52 NAKPLVCYYSFTLENYATVGPACADCLKGNQKACRRKGCVTADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDR 131 (445)
Q Consensus 52 ~~~p~~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~ 131 (445)
.+.|.+++|+++++..+ ....+|....+|+|||++|||+|+|++||+|+|+|+|++.
T Consensus 25 ~~~~~~~~~~l~~~~~~---------------------~~~~~g~~~~~~t~NG~~PGPti~v~~Gd~v~i~~~N~~~-- 81 (153)
T d1mzya1 25 ASGPVINEFEMRIIEKE---------------------VQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPE-- 81 (153)
T ss_dssp SSSCCEEEEEEEEEEEE---------------------EEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTT--
T ss_pred CCCCeEEEEEEEEEEEE---------------------EEeCCCcEEEEEEECCCcCCCcEEEeCCCEEEEEEEcCCC--
Confidence 44678999999999753 3346899999999999999999999999999999999854
Q ss_pred CceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc-----chhhhcCceeEEEEeCCC
Q psy16562 132 EVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV-----GLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 132 ~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~-----~~q~~~Gl~G~lIV~~~~ 201 (445)
.+..||||+|.. ..+||... +++|+||++++|+|.+.++||||||||. ..|+++||+|+|||++++
T Consensus 82 ~~~~H~~~~h~~--~~~~~~~~--~~~i~PG~t~ty~f~a~~~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV~P~d 152 (153)
T d1mzya1 82 NTMPHNIDFHAA--TGALGGGG--LTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRD 152 (153)
T ss_dssp CCSCBCCEETTS--CSGGGGGG--GCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTT
T ss_pred CceEccCccccC--CcCCCCCc--cccccCCCEEEEEEEcCCCceEEEEeCCcccccHhHHhCCCEEEEEEecCC
Confidence 556666666643 35666544 4589999999999999999999999995 368999999999998764
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.96 E-value=8.3e-29 Score=216.85 Aligned_cols=104 Identities=24% Similarity=0.408 Sum_probs=90.4
Q ss_pred cCCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEec
Q psy16562 92 TADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 92 ~~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~ 171 (445)
..+|.++.+|+|||++|||+|+|++||+|+|+|+|++. ++||||+++....++||. .++++|.||++++|+|++
T Consensus 40 ~~~G~~~~~~~~Ng~~pGP~i~v~~Gd~v~v~~~N~~~----~~~~H~~~~h~~~~~~~~--~~~~~i~PG~t~~y~f~a 113 (151)
T d1kbva1 40 MDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPS----STVPHNVDFHAATGQGGG--AAATFTAPGRTSTFSFKA 113 (151)
T ss_dssp EETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTT----CSSCBCCEETTCCSGGGG--TTTTCBCTTEEEEEEEEC
T ss_pred eCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEcCCC----CceeeeccccccccCCCC--cceeeeCCCCEEEEEEeC
Confidence 45799999999999999999999999999999999753 567777777665556654 577889999999999999
Q ss_pred CCCcceEEeccc---chhhhcCceeEEEEeCCC
Q psy16562 172 MPSGTFFYHSHV---GLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 172 ~~~GT~wYH~H~---~~q~~~Gl~G~lIV~~~~ 201 (445)
+++||||||||. +.|+.+||+|+|||++++
T Consensus 114 ~~~Gt~~YH~H~~~~~~h~~~Gm~G~liV~p~~ 146 (151)
T d1kbva1 114 LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKE 146 (151)
T ss_dssp CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTT
T ss_pred CCCeEEEEECCCCChHHHHhCCCEEEEEEECCC
Confidence 999999999995 469999999999998664
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.94 E-value=2e-26 Score=212.64 Aligned_cols=153 Identities=26% Similarity=0.457 Sum_probs=122.0
Q ss_pred ccccCCcceEEEEeeeeccCCCCccCCCC--CCCCCCCCCeEEEccccCCCCC---------------CCCCcccceEEE
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNT--YNDTRIKPDAILINGQNQNPKD---------------NSPRVPMHFFKV 271 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~---------------~~~~~p~~~i~v 271 (445)
+|+||. |++|+|+||+|....+.+.... .......++.++|||++..++. .....+.+.|+|
T Consensus 1 p~~yD~-e~~l~l~DWyh~~~~~~~~~~~~~~~~~~~~~d~~ling~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (209)
T d1aoza2 1 PFHYDG-EINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHV 79 (209)
T ss_dssp SSCCSE-EEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEEEETTBCCSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEE
T ss_pred CCCCCc-eEEEEEEeCCCCCHHHHHHHHhcCCCCCCCCCCeeEEcCCCCcCCCcccccccccccccccCCCCCCceEEEE
Confidence 366764 8999999999976543211111 1123357899999999875321 122355678999
Q ss_pred ecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCC-ceEEEEEEec--C-
Q psy16562 272 QRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSN-NLYWMQAKTL--C- 347 (445)
Q Consensus 272 ~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~-G~y~~~~~~~--~- 347 (445)
++|++|||||||+++. +.+.|+|++|.|+|||+||++++|..++.+.|+|||||||+|++++.+ ++||+++... +
T Consensus 80 ~~g~~~RlRliNa~~~-~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~pGqRydvlv~~~~~~~~~y~i~~~~~~~~~ 158 (209)
T d1aoza2 80 SPKKTYRIRIASTTAL-AALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP 158 (209)
T ss_dssp CTTCEEEEEEEECCSS-CEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCC
T ss_pred cCCCEEEEEEEecCCc-eeEEEEeCCCcEEEEecCCEEcccceeeeEEEccCcEEEEEEEecCCCCCceEEEEeccccCC
Confidence 9999999999999987 589999999999999999999999999999999999999999999865 4799998776 3
Q ss_pred CCceeeEEEEEcCCCC
Q psy16562 348 DSITAEAVLQYEGEKL 363 (445)
Q Consensus 348 ~~~~~~ail~y~~~~~ 363 (445)
....+.++|+|.+...
T Consensus 159 ~~~~~~ail~y~~~~~ 174 (209)
T d1aoza2 159 NTPPGLTLLNYLPNSV 174 (209)
T ss_dssp CSCCEEEEEEETTSCT
T ss_pred CccceeEEEEeCCCCc
Confidence 5667889999988765
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.92 E-value=1.2e-25 Score=201.25 Aligned_cols=101 Identities=21% Similarity=0.314 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCC----CCCCCCCCccccc--CCCCCCceEEEEecCC-------
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV----TPWMDGVPMVTQC--PIPSSTTFRYKFPAMP------- 173 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~----~~~~DGvp~~tq~--pI~pG~~~~Y~f~~~~------- 173 (445)
+|||+|||++||+|+|+|+|+|+ +++||||||+.+.. ..++||++..++| +|+||++|+|+|.+++
T Consensus 57 ~~GP~Ira~~GD~i~V~f~N~~~-~~~siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp~~~ 135 (180)
T d1sdda1 57 LLGPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHD 135 (180)
T ss_dssp SCCCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSS
T ss_pred CcCCeEEEECCcEEeeEEEeCCC-CCccccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccCccC
Confidence 79999999999999999999998 89999999998643 3467888777665 8999999999999963
Q ss_pred ---CcceEEecccc--hhhhcCceeEEEEeCCCCCCCCCC
Q psy16562 174 ---SGTFFYHSHVG--LQKMDGLEGSMIIRTPKTADPHAE 208 (445)
Q Consensus 174 ---~GT~wYH~H~~--~q~~~Gl~G~lIV~~~~~~~p~~~ 208 (445)
+||||||||.. .|..+||+|+|||.++...+..+.
T Consensus 136 d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g~l~~dg~ 175 (180)
T d1sdda1 136 DPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGT 175 (180)
T ss_dssp SCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSS
T ss_pred CCCCEEEEEecCCCcHHHhhCCceEEEEEccCCCCCcCcC
Confidence 48999999974 688999999999998866554443
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.2e-24 Score=196.93 Aligned_cols=96 Identities=25% Similarity=0.290 Sum_probs=80.8
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCC------------CCcccccCCCCCCceEEEEecCC
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDG------------VPMVTQCPIPSSTTFRYKFPAMP 173 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DG------------vp~~tq~pI~pG~~~~Y~f~~~~ 173 (445)
.++||+|+|++||+|+|+|+|++. +++||||||++... .+|| ....+||+|+||++|+|+|.+++
T Consensus 82 G~lGP~Ira~~GD~v~V~~~N~~~-~p~siH~HG~~~~~--~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~ 158 (207)
T d2j5wa3 82 GILGPVIWAEVGDTIRVTFHNKGA-YPLSIEPIGVRFNK--NNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPK 158 (207)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSS-SCBCCEEESSBCCG--GGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCG
T ss_pred CCcCceEEEECCCEEEEEEEECCC-CCccccccccccCc--ccccccccCCCCcccCCcCcccceecCCCEEEEEEEecC
Confidence 389999999999999999999998 89999999998643 2343 33457899999999999999974
Q ss_pred -Cc---------ceEEecccc--hhhhcCceeEEEEeCCCCCC
Q psy16562 174 -SG---------TFFYHSHVG--LQKMDGLEGSMIIRTPKTAD 204 (445)
Q Consensus 174 -~G---------T~wYH~H~~--~q~~~Gl~G~lIV~~~~~~~ 204 (445)
.| |||||||+. .|+.+||+|+|||+.+...+
T Consensus 159 ~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~~~g~l~ 201 (207)
T d2j5wa3 159 EVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKICKKGSLH 201 (207)
T ss_dssp GGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEECTTCBC
T ss_pred CCCCccCCCCceeEEEccCCChhHhhccCceEEEEEccCCCCC
Confidence 33 999999985 56689999999999875543
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2.8e-23 Score=188.16 Aligned_cols=96 Identities=27% Similarity=0.379 Sum_probs=82.2
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCC----CCCCCCCCc--ccccCCCCCCceEEEEecCC------
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKV----TPWMDGVPM--VTQCPIPSSTTFRYKFPAMP------ 173 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~----~~~~DGvp~--~tq~pI~pG~~~~Y~f~~~~------ 173 (445)
.+|||+|+|++||+|+|+|+|+++ .+++|||||+++.. .++.||... .++++|+||++++|.|.+++
T Consensus 72 G~lGP~Ira~~GD~v~V~~~N~~~-~p~siH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p~~ 150 (192)
T d2j5wa1 72 GFLGPIIKAETGDKVYVHLKNLAS-RPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGE 150 (192)
T ss_dssp TTSCCCEEEETTCEEEEEEEEESS-SCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCT
T ss_pred CCcCCeEEEECCcEEEEEEEeCCC-CCcceeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCcccccc
Confidence 389999999999999999999998 89999999998753 234555543 47899999999999999964
Q ss_pred ----CcceEEecccc--hhhhcCceeEEEEeCCCC
Q psy16562 174 ----SGTFFYHSHVG--LQKMDGLEGSMIIRTPKT 202 (445)
Q Consensus 174 ----~GT~wYH~H~~--~q~~~Gl~G~lIV~~~~~ 202 (445)
+||||||||.. .|+.+||+|+|||+++..
T Consensus 151 ~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~~g~ 185 (192)
T d2j5wa1 151 GDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDS 185 (192)
T ss_dssp TSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTC
T ss_pred CCCCCceEEEeCCCCcHHHHhCCCeEEEEEccCCC
Confidence 47999999974 689999999999998743
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.6e-22 Score=179.28 Aligned_cols=85 Identities=26% Similarity=0.360 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC-C---------c
Q psy16562 106 QLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP-S---------G 175 (445)
Q Consensus 106 ~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~-~---------G 175 (445)
.++||+|+|++||+|+|+|+|.+. +++||||||+.... .+ +|+++||++|+|+|.+++ . +
T Consensus 82 g~lGP~IraevGD~i~V~f~N~a~-~p~SiH~HGv~~~~--~~-------~~~v~PGet~tY~w~v~~~~gp~~~d~~c~ 151 (179)
T d2j5wa4 82 GILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQTES--ST-------VTPTLPGETLTYVWKIPERSGAGTEDSACI 151 (179)
T ss_dssp TTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCBCSC--SC-------CCCBCTTCEEEEEEECCGGGSCCTTSCSEE
T ss_pred CccCCeEEEECCCEEEEEEEeCCC-CCEeEeeccccCCC--CC-------CCcccCCccEEEEEEecCccCCccCCCCce
Confidence 478999999999999999999998 89999999998754 23 457999999999999974 3 3
Q ss_pred ceEEecccc--hhhhcCceeEEEEeCC
Q psy16562 176 TFFYHSHVG--LQKMDGLEGSMIIRTP 200 (445)
Q Consensus 176 T~wYH~H~~--~q~~~Gl~G~lIV~~~ 200 (445)
|||||||+. .|..+||+|+|||+.+
T Consensus 152 t~~YHShv~~~~d~~sGL~GplIVc~k 178 (179)
T d2j5wa4 152 PWAYYSTVDQVKDLYSGLIGPLIVCRR 178 (179)
T ss_dssp EEEEECCTTHHHHHHTTCEEEEEEECC
T ss_pred eEEEecCCCcHHHhhCCCeEEEEEEeC
Confidence 999999985 5778999999999854
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=4.4e-21 Score=169.38 Aligned_cols=120 Identities=23% Similarity=0.288 Sum_probs=95.2
Q ss_pred ccccCCcceEEEEeeeeccCCCCccCCCC--CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCC
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDSKFPGNT--YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSC 286 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~~~~~~~--~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~ 286 (445)
.|+.| |++|+|+||+++..+....... ....+..++.++|||+.++ .+.++ |++||||++|++.
T Consensus 5 ~yg~d--diplvi~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~p-----------~~~~~-~~~~RlR~iNa~~ 70 (165)
T d1kv7a2 5 QWGID--DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYP-----------QHAAP-RGWLRLRLLNGCN 70 (165)
T ss_dssp CBTTT--EEEEEEEEECBCTTSSBCCCCCHHHHHHCCCCSEEEETTBSSC-----------EEEEE-EEEEEEEEEECCS
T ss_pred CCCCC--cEeEEeEcccCCCCCCCccCCCCcccCCCccCCEEEEcCcccc-----------eEecc-CcEEEEEEEEccc
Confidence 46666 8999999999887655222111 1124567899999999764 67776 7799999999997
Q ss_pred CceeEEEEe-cccceEEEccCCCcc-eeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 287 LACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 287 ~~~~~~~~i-~gh~~~via~DG~~v-~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
. +.+.|++ +||.|+||++||+++ +|..++++.|+|||||||+|++++.++.+|+..
T Consensus 71 ~-~~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~~~~l 128 (165)
T d1kv7a2 71 A-RSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTL 128 (165)
T ss_dssp S-CCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEEECTTCCEEEEEC
T ss_pred C-ceeeEEecCCCeEEEEEeCCccccCceEeCeEEECCCCEEEEEEECCCCCcEEEEEE
Confidence 6 4788887 799999999999999 599999999999999999999998544455543
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=99.84 E-value=3.9e-20 Score=164.62 Aligned_cols=133 Identities=21% Similarity=0.340 Sum_probs=103.2
Q ss_pred ceEEEEeeeeccCCCCccCCCC-----------CCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEcc
Q psy16562 216 SHVIIVTDWMHSMTDSKFPGNT-----------YNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGG 284 (445)
Q Consensus 216 e~~l~l~D~~~~~~~~~~~~~~-----------~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~ 284 (445)
|++|+|+||+++...+.+.... ....+..++.++|||+.++ .++|+ +++|||||||+
T Consensus 8 Diplvl~D~~~~~dg~l~~~~~~~~~~~~~~~~~~~~g~~Gd~~lvNG~~~p-----------~~~v~-~~~~RlRliNa 75 (174)
T d1gska2 8 DVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVWP-----------YLEVE-PRKYRFRVINA 75 (174)
T ss_dssp EEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEESC-----------EEECC-SSEEEEEEEEC
T ss_pred CEEEEeEecccCCCCCEEeeccccCCCcCCcccccccCccCCeEEecCccce-----------EEEec-CceEEEEEEec
Confidence 5899999999876655332211 1234567899999999764 77776 56899999999
Q ss_pred CCCceeEEEEec-ccceEEEccCCCcce-eeEecEEEecCCceEEEEEecCCCCceEEEEEEec-C----CCceeeEEEE
Q psy16562 285 SCLACPLIFTIE-KHQLQVIASDGTAVE-PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-C----DSITAEAVLQ 357 (445)
Q Consensus 285 ~~~~~~~~~~i~-gh~~~via~DG~~v~-P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-~----~~~~~~ail~ 357 (445)
+.. +.+.|+|. ||.|+|||+||++++ |..++.+.|+|||||||+|++++.+|.+|+..... + .......+++
T Consensus 76 ~~~-~~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~vl~ 154 (174)
T d1gska2 76 SNT-RTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPETDANIMQ 154 (174)
T ss_dssp CSS-CCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSCCCTTTTTEEEE
T ss_pred ccC-ceeeEeecCCCcEEEEEECCCcccCceEeCEEEEcCCcEEEEEEECCCCCCceEEEEccCCCCCccCCCCCcceEE
Confidence 987 58999995 789999999999995 99999999999999999999998778877665543 1 2233446777
Q ss_pred EcCC
Q psy16562 358 YEGE 361 (445)
Q Consensus 358 y~~~ 361 (445)
|...
T Consensus 155 ~~v~ 158 (174)
T d1gska2 155 FRVT 158 (174)
T ss_dssp EECC
T ss_pred EEec
Confidence 7643
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.82 E-value=7.4e-21 Score=166.29 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=86.6
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCC--CCceEeeCCcccCCC--CCCCCCCcccccCCCCCCceEEE
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMID--REVTLHWHGVYQKVT--PWMDGVPMVTQCPIPSSTTFRYK 168 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~--~~tsiHwHG~~~~~~--~~~DGvp~~tq~pI~pG~~~~Y~ 168 (445)
..|.....+.+||+ |||+|+|++||+|+|+|+|..+. .+..||+||...... ..+++.+...++.+.||++++|.
T Consensus 44 ~~g~~~~~~~~~~~-~~Pti~v~~Gd~V~i~v~N~~~~~~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~pg~~~~~~ 122 (153)
T d1e30a_ 44 LPGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTN 122 (153)
T ss_dssp CTTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCBTTEEEEEE
T ss_pred ccccccceeecCCC-cCCeEEEeCCCEEEEEEEeCCCCCcccEEEEcCCCCccccccccccCCCccceeeecCCCEEEEE
Confidence 35777788999996 89999999999999999997532 567788888665321 23444455678899999999999
Q ss_pred Eec-CCCcceEEecccchhhhcCceeEEEEe
Q psy16562 169 FPA-MPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 169 f~~-~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
|++ +++||||||||...|+..||+|.|||+
T Consensus 123 f~~~~~pGty~YhCh~~~H~~~GM~G~iiVe 153 (153)
T d1e30a_ 123 FTWHPTAGTYYYVCQIPGHAATGQFGKIVVK 153 (153)
T ss_dssp EEECCCSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEeCCCCeEEEEeCCchhHHHCCCEEEEEEC
Confidence 986 579999999999999999999999996
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.73 E-value=4e-18 Score=146.22 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=86.4
Q ss_pred EEEEEECCC-CCCCeEEEEcCCEEEEEEEecCC-CCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCc
Q psy16562 98 RAILSINRQ-LPGPSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 175 (445)
Q Consensus 98 ~~~~~~Ng~-~PGPtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~G 175 (445)
..+++|||. ++.|.|++++||+|+++|.|... ...+++||||..... ..+|.+...+++|.||++++|+|++.++|
T Consensus 39 ~~~~tiNG~~~~~p~~~v~~gd~v~~~l~n~g~~~~~h~iH~HG~~f~~--~~~~~~~~dt~~i~pg~~~t~~~~~~~pG 116 (139)
T d1sddb2 39 HEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLE--NGTQQHQLGVWPLLPGSFKTLEMKASKPG 116 (139)
T ss_dssp CEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEE--CSSSCEEESSEEECTTEEEEEEEECCSSE
T ss_pred cccceeCcEecCCCccccccCCcEEEEEEecCCCCCcccEEEcceEEEe--ccCCCCcCCeEEECCCCEEEEEEecCCCE
Confidence 458999997 58999999999999999999653 256899999988654 35666677788999999999999999999
Q ss_pred ceEEecccchhhhcCceeEEEE
Q psy16562 176 TFFYHSHVGLQKMDGLEGSMII 197 (445)
Q Consensus 176 T~wYH~H~~~q~~~Gl~G~lIV 197 (445)
+||||||...|...||+|.++|
T Consensus 117 ~w~~HcH~~~H~~~GM~~~~~V 138 (139)
T d1sddb2 117 WWLLDTEVGEIQRAGMQTPFLI 138 (139)
T ss_dssp EEEEECCCHHHHTTTCEEEEEE
T ss_pred eEEEEeCCHHHHhccCcEEEEE
Confidence 9999999999999999999998
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.72 E-value=5e-18 Score=147.51 Aligned_cols=103 Identities=15% Similarity=0.192 Sum_probs=86.2
Q ss_pred EEEEECCCCCCCe----EEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCC----cccccCCCCCCceEEEEe
Q psy16562 99 AILSINRQLPGPS----IQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP----MVTQCPIPSSTTFRYKFP 170 (445)
Q Consensus 99 ~~~~~Ng~~PGPt----I~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp----~~tq~pI~pG~~~~Y~f~ 170 (445)
..+++||+.++++ |+|++||+|+|.|.|..+..++++|+||.+.... |.||.+ ....+.|+||++.+++|+
T Consensus 36 ~~~~fNG~~~~~t~~~~l~~~~Ge~vri~v~N~~~~~~~~~H~hG~~f~~v-~~~G~~~~~~~~~T~~v~pg~~~~~~f~ 114 (151)
T d1kbva2 36 EYVVFNGHVGALTGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV-YVEGGKLINENVQSTIVPAGGSAIVEFK 114 (151)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE-EGGGSSCEECSBSEEEECTTEEEEEEEE
T ss_pred cEEEECCccCCccCccceEEEeCCeEEEEEEcCCccccccceeecceeeEE-ecCCCcCCcccceeEecccCceeEEeee
Confidence 4689999998876 9999999999999998766789999999986433 566653 234567999999999999
Q ss_pred cCCCcceEEecccchh-hhcCceeEEEEeCCCC
Q psy16562 171 AMPSGTFFYHSHVGLQ-KMDGLEGSMIIRTPKT 202 (445)
Q Consensus 171 ~~~~GT~wYH~H~~~q-~~~Gl~G~lIV~~~~~ 202 (445)
++++|+||||||.-.+ ...||+|.|+|++++.
T Consensus 115 a~~PG~y~~h~H~l~~~~~~G~~g~~~V~~~~~ 147 (151)
T d1kbva2 115 VDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 147 (151)
T ss_dssp ECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred cCCCceEEEECCcHHHHHhccCeEEEEEcCCCC
Confidence 9999999999997544 5679999999998743
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=8.3e-18 Score=145.97 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=88.9
Q ss_pred EEEEECCCCCC--CeEEEEcCCEEEEEEEecCCC-CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCc
Q psy16562 99 AILSINRQLPG--PSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 175 (445)
Q Consensus 99 ~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~~-~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~G 175 (445)
.+++|||..+| |.|++++||+++++|.|.... ..+++||||..... ..+|.+...++.|.||++.+|+|++..+|
T Consensus 47 ~~~~iNG~~~~~~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~--~~~g~~~~dtv~i~pg~~~~~~~~a~~pG 124 (149)
T d2j5wa5 47 KMHAINGRMFGNLQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQY--KHRGVYSSDVFDIFPGTYQTLEMFPRTPG 124 (149)
T ss_dssp EEEEETTBCTTCCCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEE--TTTTCEEESEEEECTTCEEEEEECCCSCE
T ss_pred cceEECCCcCCCCCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEeee--eccCCCCcceEEECCCceEEEEEeCCCCe
Confidence 78999999998 889999999999999998652 57999999987654 46777777778999999999999999999
Q ss_pred ceEEecccchhhhcCceeEEEEeC
Q psy16562 176 TFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 176 T~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+|+||||...|...||+|.++|.+
T Consensus 125 ~w~~HCHi~~H~~~GM~~~f~V~~ 148 (149)
T d2j5wa5 125 IWLLHCHVTDHIHAGMETTYTVLQ 148 (149)
T ss_dssp EEEEEECCHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhccCceEEEEec
Confidence 999999999999999999999974
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=8.1e-18 Score=145.34 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=83.0
Q ss_pred EEEEECCCCCC--CeEEEEcCCEEEEEEEecCC-CCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCc
Q psy16562 99 AILSINRQLPG--PSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 175 (445)
Q Consensus 99 ~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~G 175 (445)
.+++|||+.+| |.|++++||+|++++.|... ...+++||||..... ++. ...+++|.||++.+|+|+++.+|
T Consensus 46 ~~~tiNG~~~~~~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~----~~~-~~dt~~i~pg~~~t~~~~a~~pG 120 (145)
T d2j5wa2 46 KMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW----RGE-RRDTANLFPQTSLTLHMWPDTEG 120 (145)
T ss_dssp EEEEETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE----TTE-EESEEEECTTCEEEEEECCCSCE
T ss_pred ceEEECCccCCCCCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe----ccc-CccceEECCCCEEEEEEEcCCCE
Confidence 68999999999 99999999999999999543 256899999987532 222 23456899999999999999999
Q ss_pred ceEEecccchhhhcCceeEEEEeC
Q psy16562 176 TFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 176 T~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+||||||...++..||.|.++|++
T Consensus 121 ~w~~HCH~~~H~~~GM~~~~~V~~ 144 (145)
T d2j5wa2 121 TFNVECLTTDHYTGGMKQKYTVNQ 144 (145)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEcCCHHHHhCCCeEEEEEec
Confidence 999999999999999999999973
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.5e-17 Score=143.75 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=83.3
Q ss_pred EEEEECCCCCC--CeEEEEcCCEEEEEEEecCC-CCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCc
Q psy16562 99 AILSINRQLPG--PSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 175 (445)
Q Consensus 99 ~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~G 175 (445)
.+++|||..+| |.|++++||+++++|.|... ...+++||||......+ .....++|.||++++|+|.+.++|
T Consensus 47 ~~~tiNG~~~~~~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~~~-----~~~dt~~i~pg~~~~v~f~~~~pG 121 (146)
T d1kcwa2 47 RMYSVNGYTFGSLPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNKN-----YRIDTINLFPATLFDAYMVAQNPG 121 (146)
T ss_dssp EEEESSSCCSSCCCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCCSS-----SCCSEEEECTTCEEEEEEEECSCE
T ss_pred ceEEECCccCCCCCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeeccC-----CCcceEEecCCCEEEEEEEcCCCe
Confidence 57899999999 99999999999999999754 25689999998764322 223356899999999999999999
Q ss_pred ceEEecccchhhhcCceeEEEEeC
Q psy16562 176 TFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 176 T~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+||||||...+...||+|.++|++
T Consensus 122 ~w~~HCH~~~H~~~GM~~~~~V~~ 145 (146)
T d1kcwa2 122 EWMLSCQNLNHLKAGLQAFFQVQE 145 (146)
T ss_dssp EEEEEECCHHHHHTCCEEEEEEEC
T ss_pred eEEEEcCCHHHHhcCCeEEEEEEe
Confidence 999999999999999999999974
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.60 E-value=2.1e-17 Score=137.17 Aligned_cols=92 Identities=17% Similarity=0.305 Sum_probs=64.1
Q ss_pred EEEEECCCCCC--CeEEEEcCCEEEEEEEecCCC-CCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCc
Q psy16562 99 AILSINRQLPG--PSIQVCKGDTIIVDVKNHMID-REVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSG 175 (445)
Q Consensus 99 ~~~~~Ng~~PG--PtI~v~~GD~v~V~v~N~l~~-~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~G 175 (445)
.+++|||..+| |.|++|+||+|+++|.|.... ..+++||||..... +|.. ..+.+|.||++++|+|+++.+|
T Consensus 22 ~~~tiNG~~~~~~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~----~~~~-~dtv~i~pg~~~~v~~~a~~pG 96 (116)
T d1sdda2 22 LMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ----NHHK-ISAITLVSATSTTANMTVSPEG 96 (116)
T ss_dssp EEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE----TTEE-CSCCCEETTCCBC--------C
T ss_pred cEEEECCCcCCCCCCeEEeCCCEEEEEEeccccCCCceeEEEecccccc----CCcc-cceEeecccEEEEEEEEcCCCe
Confidence 57999999999 679999999999999996532 56899999987632 3332 2346899999999999999999
Q ss_pred ceEEecccchhhhcCceeEE
Q psy16562 176 TFFYHSHVGLQKMDGLEGSM 195 (445)
Q Consensus 176 T~wYH~H~~~q~~~Gl~G~l 195 (445)
+||||||...+...||+|.|
T Consensus 97 ~w~~HCH~~~H~~~GM~a~i 116 (116)
T d1sdda2 97 RWTIASLIPRHFQAGMQAYI 116 (116)
T ss_dssp CCCCBCCSTTTGGGTCBCCC
T ss_pred EEEEEcCCHHHHHccceecC
Confidence 99999999999999999864
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.57 E-value=4.4e-15 Score=125.51 Aligned_cols=96 Identities=18% Similarity=0.145 Sum_probs=79.8
Q ss_pred CCCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecC
Q psy16562 93 ADGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAM 172 (445)
Q Consensus 93 ~dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~ 172 (445)
.++....+++.+++|++|.|+|++||+|+++|+|... ....+|+|++...+. +-.+.||++.+|.|++.
T Consensus 35 g~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~ltN~d~-~~~v~H~~~i~~~~~----------~~~~~PG~~~~~~F~a~ 103 (132)
T d1fwxa1 35 GNKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDE-IDDLTHGFTMGNYGV----------AMEIGPQMTSSVTFVAA 103 (132)
T ss_dssp TTEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCC-STTCCEEEEETTTTE----------EEEECTTCEEEEEEECC
T ss_pred CCceEEEEEeecCcccCCEEEEcCCCEEEEEEEcCCC-CccceEeechhhhcc----------ccccCCCEEEEEEEeCC
Confidence 3556778999999999999999999999999999876 567899999865431 12588999999999999
Q ss_pred CCcceEEecccchhh-hcCceeEEEEeC
Q psy16562 173 PSGTFFYHSHVGLQK-MDGLEGSMIIRT 199 (445)
Q Consensus 173 ~~GT~wYH~H~~~q~-~~Gl~G~lIV~~ 199 (445)
++||||||||.--.. -.||.|.|||++
T Consensus 104 ~~G~y~~~C~~~cg~~H~~M~G~iiVeP 131 (132)
T d1fwxa1 104 NPGVYWYYCQWFCHALHMEMRGRMLVEP 131 (132)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCeEEEEECccccCcchhcCEEEEEEEc
Confidence 999999999952111 159999999986
|
| >d1kbva2 b.6.1.3 (A:164-314) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=99.56 E-value=5.5e-15 Score=128.02 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=102.3
Q ss_pred cceEEEEeeeeccCCCCccCC---CCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeE
Q psy16562 215 YSHVIIVTDWMHSMTDSKFPG---NTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPL 291 (445)
Q Consensus 215 ~e~~l~l~D~~~~~~~~~~~~---~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~ 291 (445)
+|++|+.+||+.......... .+.......++.++|||+.... .....|+++.|+++||+|.|++... ..
T Consensus 2 rey~l~~~e~Y~~~~~~~~~~~~~d~~~~~~~~p~~~~fNG~~~~~------t~~~~l~~~~Ge~vri~v~N~~~~~-~~ 74 (151)
T d1kbva2 2 KEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAL------TGDNALKAKAGETVRMYVGNGGPNL-VS 74 (151)
T ss_dssp EEEEEEEEEECBSSCTTCCEEECBCHHHHHHTCCSEEEETTSTTTT------SGGGCEEEETTEEEEEEEEEEESSC-CE
T ss_pred ceEEEeccEEecCCcCCCCcCCccCHhHHhcCCCcEEEECCccCCc------cCccceEEEeCCeEEEEEEcCCccc-cc
Confidence 389999999997533221100 0001112467889999986532 1124699999999999999987653 56
Q ss_pred EEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeEEEEEcCC
Q psy16562 292 IFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEAVLQYEGE 361 (445)
Q Consensus 292 ~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~ail~y~~~ 361 (445)
.+|+||+.|.++..||........+++.|.||+++++.+++++ ||+||+|||.. .......++|.+.+.
T Consensus 75 ~~H~hG~~f~~v~~~G~~~~~~~~~T~~v~pg~~~~~~f~a~~-PG~y~~h~H~l~~~~~~G~~g~~~V~~~ 145 (151)
T d1kbva2 75 SFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDI-PGNYTLVDHSIFRAFNKGALGQLKVEGA 145 (151)
T ss_dssp EEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECS-CEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred cceeecceeeEEecCCCcCCcccceeEecccCceeEEeeecCC-CceEEEECCcHHHHHhccCeEEEEEcCC
Confidence 7889999999999999888655679999999999999999998 89999999975 222344556666654
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=99.52 E-value=2.3e-14 Score=117.79 Aligned_cols=94 Identities=20% Similarity=0.188 Sum_probs=74.5
Q ss_pred ecCCCeE-EEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEE
Q psy16562 91 VTADGFE-RAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKF 169 (445)
Q Consensus 91 ~~~dG~~-~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f 169 (445)
+..+|.. +.++..|..++.++|+|++||+|++++.|... ..+++++|+... +..+.||++.+|+|
T Consensus 18 ~~~~g~~~~~~~~~~~~~~P~~i~v~~Gd~V~~~~~n~d~-~~H~~~i~~~~~-------------~~~~~pG~t~~~~f 83 (112)
T d1ibya_ 18 LNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSP-ISEGFSIDAFGV-------------QEVIKAGETKTISF 83 (112)
T ss_dssp EEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSS-SCEEEEEGGGTE-------------EEEECTTCEEEEEE
T ss_pred eccCCeEEEEEEeecCCCCCCEEEEeCCCEEEEEEEeCCC-Cceeeeeccccc-------------ccccCCcceEEEEE
Confidence 4457764 67777787777669999999999999999865 567777766422 23578999999999
Q ss_pred ecCCCcceEEecccchhhhcCceeEEEEeC
Q psy16562 170 PAMPSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 170 ~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+++++||||||||.... ..||.|.|||.+
T Consensus 84 ~~~~~G~y~y~C~~~~~-~~~M~G~i~V~e 112 (112)
T d1ibya_ 84 TADKAGAFTIWCQLHPK-NIHLPGTLNVVE 112 (112)
T ss_dssp ECCSCEEEEEBCSSSCT-TTBCCEEEEEEC
T ss_pred EeccceEEEEECcccCh-hhcCeEEEEEEC
Confidence 99999999999997322 467999999964
|
| >d1sddb2 b.6.1.3 (B:1724-1862) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.46 E-value=3.3e-13 Score=115.07 Aligned_cols=125 Identities=8% Similarity=0.109 Sum_probs=86.8
Q ss_pred CcceEEEEee------eeccCCCCccCCCCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCC
Q psy16562 214 LYSHVIIVTD------WMHSMTDSKFPGNTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCL 287 (445)
Q Consensus 214 ~~e~~l~l~D------~~~~~~~~~~~~~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~ 287 (445)
.+|++|+++- |+.+.............-.......+|||+.+. .|.+.++.|+++||||+|.+..
T Consensus 2 ~~ef~l~f~vfdEn~Swy~~~n~~~~~~~~~~~~~~~~~~~tiNG~~~~---------~p~~~v~~gd~v~~~l~n~g~~ 72 (139)
T d1sddb2 2 MREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIYN---------LPGLRMYEQEWVRLHLLNLGGS 72 (139)
T ss_dssp CCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSSC---------CCCCEEETTCEEEEEEEECCCT
T ss_pred ceEEEEEEeeEcCccccccccCccccccCCChhhhhccccceeCcEecC---------CCccccccCCcEEEEEEecCCC
Confidence 4588888773 555433221111111111234567899999653 3678999999999999999865
Q ss_pred ceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec---CCCceee
Q psy16562 288 ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAE 353 (445)
Q Consensus 288 ~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ 353 (445)
...+.+++|||.+.+...+ +...+++.|.||+++++.+++++ ||+|++|||.. ..++.+.
T Consensus 73 ~~~h~iH~HG~~f~~~~~~-----~~~~dt~~i~pg~~~t~~~~~~~-pG~w~~HcH~~~H~~~GM~~~ 135 (139)
T d1sddb2 73 RDIHVVHFHGQTLLENGTQ-----QHQLGVWPLLPGSFKTLEMKASK-PGWWLLDTEVGEIQRAGMQTP 135 (139)
T ss_dssp TCCEEEEETTCCEEECSSS-----CEEESSEEECTTEEEEEEEECCS-SEEEEEECCCHHHHTTTCEEE
T ss_pred CCcccEEEcceEEEeccCC-----CCcCCeEEECCCCEEEEEEecCC-CEeEEEEeCCHHHHhccCcEE
Confidence 4568888999999875433 35679999999999999999987 89999999987 3555444
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=2.1e-13 Score=100.41 Aligned_cols=46 Identities=26% Similarity=0.392 Sum_probs=40.2
Q ss_pred CCCCCCceEEEEecCCCc----------ceEEecccc--hhhhcCceeEEEEeCCCCC
Q psy16562 158 PIPSSTTFRYKFPAMPSG----------TFFYHSHVG--LQKMDGLEGSMIIRTPKTA 203 (445)
Q Consensus 158 pI~pG~~~~Y~f~~~~~G----------T~wYH~H~~--~q~~~Gl~G~lIV~~~~~~ 203 (445)
+|+||++|+|+|++++.+ |||||||.. .|+.+||+|+|||..+...
T Consensus 2 ~V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g~l 59 (67)
T d1sddb1 2 AIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTL 59 (67)
T ss_dssp CBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSS
T ss_pred cCCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCCCc
Confidence 689999999999998544 999999985 5899999999999987543
|
| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=99.38 E-value=2.5e-13 Score=114.27 Aligned_cols=99 Identities=12% Similarity=0.167 Sum_probs=76.6
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc---cCCCcceeeEecEE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---SDGTAVEPLVVDSV 318 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---~DG~~v~P~~~~~~ 318 (445)
+.....+++||+ .|+|+|++++||++++++.|..... + .++|+|++.+.. .||. ..++++
T Consensus 19 g~~~~~~~~NG~----------~PGP~i~v~~GD~v~i~l~N~l~~~-~--~~iH~Hg~~~~~~~~~~~~----~~~~~~ 81 (129)
T d1aoza1 19 CNENIVMGINGQ----------FPGPTIRANAGDSVVVELTNKLHTE-G--VVIHWHGILQRGTPWADGT----ASISQC 81 (129)
T ss_dssp SSCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCSSC-C--BCEEEETCCCTTCGGGSCC----BTTTBC
T ss_pred CeEEEEEEECCC----------cCCCeEEEECCcEEEEEEEeCCCCC-C--eeeeeccceeeccCccccc----cccccc
Confidence 345578999999 7789999999999999999987542 2 336777776643 3552 335677
Q ss_pred EecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEE
Q psy16562 319 TLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQY 358 (445)
Q Consensus 319 ~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y 358 (445)
.|.||++++|.|.+++ +|+||||+|.. ..++.+..||+-
T Consensus 82 ~I~PG~s~~y~f~a~~-~Gt~~YH~H~~~h~~~Gm~G~~iV~~ 123 (129)
T d1aoza1 82 AINPGETFFYNFTVDN-PGTFFYHGHLGMQRSAGLYGSLIVDP 123 (129)
T ss_dssp CBCTTCEEEEEEECCS-CEEEEEEECSTTTGGGTCEEEEEEEC
T ss_pred eECCCCEEEEEEECCC-CCceEEecCCHHHHhCCCEEEEEEcC
Confidence 8999999999999987 79999999987 366766666643
|
| >d1v10a1 b.6.1.3 (A:1-136) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=99.36 E-value=3.2e-13 Score=114.36 Aligned_cols=101 Identities=17% Similarity=0.255 Sum_probs=79.6
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEEc---cCCCcceeeEecEEE
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVIA---SDGTAVEPLVVDSVT 319 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~via---~DG~~v~P~~~~~~~ 319 (445)
....+++||+ .|+|+|++++||++++++.|..... .....+||+|++.+.+ .||. ..++++.
T Consensus 21 ~~~~~~~nG~----------~PGP~i~~~~GD~v~v~~~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv----~~~t~~~ 86 (136)
T d1v10a1 21 ARSAVTAEGT----------TIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGP----AFVNQCP 86 (136)
T ss_dssp CEEEEEESSS----------SSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCC----BTTTBCC
T ss_pred eeEEEEECCC----------ccCCeEEEECCcEEEEEEEeCCCCcccCcceeEEecccccccccccCCC----Cccccce
Confidence 3468999999 7889999999999999999987531 1134568899988753 3773 3357788
Q ss_pred ecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEEE
Q psy16562 320 LFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQY 358 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~y 358 (445)
|.||++++|.+++++++|+||||+|.. ..++.+..||+-
T Consensus 87 I~PG~~~~Y~~~~~~~~Gt~wYH~H~~~q~~~GL~G~liV~~ 128 (136)
T d1v10a1 87 IIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYD 128 (136)
T ss_dssp BCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEEC
T ss_pred ECCCCeEEEEEECCCCccceEEecCchhHHhCCCEEEEEECC
Confidence 999999999999987789999999986 367777766653
|
| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.35 E-value=3.9e-13 Score=113.02 Aligned_cols=102 Identities=19% Similarity=0.350 Sum_probs=78.8
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEEcc---CCCcceeeEecE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVIAS---DGTAVEPLVVDS 317 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~via~---DG~~v~P~~~~~ 317 (445)
+.....+++||+ .|+|+|++++|+++++||.|.+... .....++|+|++.+-+. || +...++
T Consensus 19 G~~~~~~~~ng~----------~PGPtI~~~~GD~v~v~~~N~~~~~~~~~~~~iH~HG~~~~~~~~~d~----~~~~s~ 84 (130)
T d1gyca1 19 GFLRDAIVVNGV----------FPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADG----PAFVNQ 84 (130)
T ss_dssp SCCEEEEEETTB----------SSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSC----CBTTTB
T ss_pred CEEEEEEEECCc----------ccCCeEEEECCeEEEEEEEecCCCcccCCceeEEeccccccccCCCCC----cccccc
Confidence 345578999999 8889999999999999999997532 11234578888877543 55 333467
Q ss_pred EEecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEE
Q psy16562 318 VTLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQ 357 (445)
Q Consensus 318 ~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~ 357 (445)
+.|.|||+++|.+++++++|+||||+|.. ..++.+..||+
T Consensus 85 ~~i~PG~s~~Y~~~~~~~~Gt~wYH~H~~~~~~~Gl~G~liV~ 127 (130)
T d1gyca1 85 CPIASGHSFLYDFHVPDQAGTFWYHSHLSTQYCDGLRGPFVVY 127 (130)
T ss_dssp CCBCTTEEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred CCCCCCCeEEEEEECCCCCceeEEecCCHHHHhCCCEEEEEEe
Confidence 78999999999999877789999999986 36677766654
|
| >d2j5wa5 b.6.1.3 (A:892-1040) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4e-12 Score=109.46 Aligned_cols=94 Identities=12% Similarity=0.163 Sum_probs=77.3
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCce
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDR 325 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR 325 (445)
..++|||+..++ .+.|.++.|+++||+|+|.+.....+.+++|||.|.+.. +| +...+++.|.||++
T Consensus 47 ~~~~iNG~~~~~--------~~~l~v~~Gd~v~~~l~n~g~~~~~h~~H~HG~~f~~~~-~g----~~~~dtv~i~pg~~ 113 (149)
T d2j5wa5 47 KMHAINGRMFGN--------LQGLTMHVGDEVNWYLMGMGNEIDLHTVHFHGHSFQYKH-RG----VYSSDVFDIFPGTY 113 (149)
T ss_dssp EEEEETTBCTTC--------CCCCEEETTCEEEEEEEECCSTTCCEEEEESSCCEEETT-TT----CEEESEEEECTTCE
T ss_pred cceEECCCcCCC--------CCCeEEEcCCcEEEEEEecCCCCCccceEEEeeEeeeec-cC----CCCcceEEECCCce
Confidence 678999997643 357999999999999999987644678889999998743 55 45689999999999
Q ss_pred EEEEEecCCCCceEEEEEEec---CCCceee
Q psy16562 326 VDVIIHTNQSNNLYWMQAKTL---CDSITAE 353 (445)
Q Consensus 326 ~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ 353 (445)
+++.+++++ +|+|++|||.. ..++.+.
T Consensus 114 ~~~~~~a~~-pG~w~~HCHi~~H~~~GM~~~ 143 (149)
T d2j5wa5 114 QTLEMFPRT-PGIWLLHCHVTDHIHAGMETT 143 (149)
T ss_dssp EEEEECCCS-CEEEEEEECCHHHHHTTCEEE
T ss_pred EEEEEeCCC-CeeEEEEcCCHHHHhccCceE
Confidence 999999987 89999999987 3444443
|
| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=3.7e-12 Score=109.16 Aligned_cols=94 Identities=9% Similarity=0.047 Sum_probs=76.5
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCce
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDR 325 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR 325 (445)
..++|||+...+ .|.++++.|+++||+|+|.+.....+.+++|||.|.+ + ....+++.|.||++
T Consensus 46 ~~~tiNG~~~~~--------~p~l~v~~Gd~v~~~l~n~g~~~~~h~iH~hG~~f~~---~-----~~~~dt~~i~pg~~ 109 (145)
T d2j5wa2 46 KMHSMNGFMYGN--------QPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLW---R-----GERRDTANLFPQTS 109 (145)
T ss_dssp EEEEETTBCTTC--------CCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEE---T-----TEEESEEEECTTCE
T ss_pred ceEEECCccCCC--------CCCeEEEcCCeEEEEEEecCCCCcccceEecccEEEe---c-----ccCccceEECCCCE
Confidence 468999996643 3679999999999999998866556888999999876 2 34578999999999
Q ss_pred EEEEEecCCCCceEEEEEEec---CCCceeeEEE
Q psy16562 326 VDVIIHTNQSNNLYWMQAKTL---CDSITAEAVL 356 (445)
Q Consensus 326 ~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail 356 (445)
+++.++++. +|+|++|||.. ..++.+...+
T Consensus 110 ~t~~~~a~~-pG~w~~HCH~~~H~~~GM~~~~~V 142 (145)
T d2j5wa2 110 LTLHMWPDT-EGTFNVECLTTDHYTGGMKQKYTV 142 (145)
T ss_dssp EEEEECCCS-CEEEEEEECSHHHHHTTCEEEEEE
T ss_pred EEEEEEcCC-CEeEEEEcCCHHHHhCCCeEEEEE
Confidence 999999987 89999999987 3555555444
|
| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.23 E-value=4.1e-12 Score=106.76 Aligned_cols=101 Identities=16% Similarity=0.250 Sum_probs=75.1
Q ss_pred CCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEEc---cCCCcceeeEecE
Q psy16562 242 RIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVIA---SDGTAVEPLVVDS 317 (445)
Q Consensus 242 ~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~via---~DG~~v~P~~~~~ 317 (445)
+.....+++||. |+|.|++++||+++++|.|..... .....+||+|++.+-. .||. ..+.+
T Consensus 20 G~~~~~~~~nG~-----------pGP~I~v~~GD~v~v~l~N~l~~~~~~~~tsiH~HGl~~~~~~~~dgv----~g~~~ 84 (131)
T d1hfua1 20 GFTRAGILVNGV-----------HGPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGA----DGVNQ 84 (131)
T ss_dssp SCCEEEEEETTB-----------SSCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCC----BTTTB
T ss_pred CeEeeEEEECCc-----------CCCeEEEECCCEEEEEEEECCCCccccccceEEeCCcccCCCCCCCCC----ccccc
Confidence 446678999994 357999999999999999987532 1123457788876632 3663 23567
Q ss_pred EEecCCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEE
Q psy16562 318 VTLFPGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQ 357 (445)
Q Consensus 318 ~~I~pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~ 357 (445)
+.|.||++|++.+...+++|+||||+|.. ..++.+..|++
T Consensus 85 ~~I~PG~~~~y~~~~~~~~Gt~wYH~H~~~q~~~Gl~G~liV~ 127 (131)
T d1hfua1 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIY 127 (131)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred ceECCCCeEEEEEeCCCCcceEEEecCCHHHHhCCCEEEEEEc
Confidence 88999999999999666689999999986 36677665554
|
| >d1kv7a1 b.6.1.3 (A:31-170) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=2.4e-11 Score=103.15 Aligned_cols=93 Identities=20% Similarity=0.260 Sum_probs=74.9
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++||++++++.|.+... .+||+|++.+- +.||.+. ..|.|
T Consensus 33 ~~~~~~~NG~----------~PGP~i~~~~Gd~v~v~~~N~l~~~----~siH~HG~~~~~~~dG~~~-------~~i~p 91 (140)
T d1kv7a1 33 TATTWGYNGN----------LLGPAVKLQRGKAVTVDIYNQLTEE----TTLHWHGLEVPGEVDGGPQ-------GIIPP 91 (140)
T ss_dssp EEEEEEESSS----------SBCCEEEEETTCEEEEEEEECSSSC----BCCEEETCCCCGGGSCCTT-------CCBCT
T ss_pred EEEEEEECCc----------cCCceEEEECCCEEEEEEEeCcccc----ccEeeeeeecCCccCCCcc-------ceEcc
Confidence 4467999998 7789999999999999999999763 33777877764 4588643 34889
Q ss_pred CceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEE
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQ 357 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~ 357 (445)
|+++++.+.+++++|+||||+|.. ..++.+..|++
T Consensus 92 g~~~~y~~~~~~~aGt~wyH~H~~~~~~~~~~~Gl~G~liV~ 133 (140)
T d1kv7a1 92 GGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIE 133 (140)
T ss_dssp TCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEE
T ss_pred CCceeEEEEEecCCeeEEEEECCCCChHHHHhCCCeEEEEEC
Confidence 999999999998789999999964 26777776664
|
| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.17 E-value=2.5e-11 Score=105.32 Aligned_cols=94 Identities=12% Similarity=0.206 Sum_probs=70.1
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPG 323 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pG 323 (445)
....+++||+ .|+|+|+++.|++++++|.|.+...+++.+++|+.. .+.+|... ..|.||
T Consensus 52 ~~~~~t~NG~----------~PGPtI~v~~Gd~v~v~~~N~~~~~h~h~ih~hg~~---~~~~g~~~-------~~I~PG 111 (159)
T d1oe2a1 52 TLQAMTFNGS----------MPGPTLVVHEGDYVQLTLVNPATNAMPHNVEFHGAT---GALGGAKL-------TNVNPG 111 (159)
T ss_dssp EEEEEEETTB----------SSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSC---SGGGGGGG-------CCBCTT
T ss_pred EEEEEEECCc----------CCCCeEEEECCcEEEEEEECCCccccccceeecccc---CCCCCccc-------ccCCCC
Confidence 4467999998 678999999999999999998865445555555432 12234322 348999
Q ss_pred ceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEEE
Q psy16562 324 DRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQY 358 (445)
Q Consensus 324 eR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~y 358 (445)
|+++|.|++++ +|+||||||.. ..++.+..|+.-
T Consensus 112 ~t~ty~f~a~~-~Gt~~yH~H~~~~~~~q~~~Gl~G~liV~p 152 (159)
T d1oe2a1 112 EQATLRFKADR-SGTFVYHCAPEGMVPWHVVSGMSGTLMVLP 152 (159)
T ss_dssp EEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEEC
T ss_pred CeEEEEEEcCC-CceEEEEeCCCCCchhHHhCCCEEEEEEEC
Confidence 99999999987 89999999964 267777766643
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.13 E-value=1e-10 Score=98.06 Aligned_cols=93 Identities=20% Similarity=0.253 Sum_probs=74.2
Q ss_pred CCeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCC
Q psy16562 94 DGFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMP 173 (445)
Q Consensus 94 dG~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~ 173 (445)
++....++....+|..+.|+|++||+|.+++.|... ..-.+|.+++...+ + +..+.||++.++.|++++
T Consensus 35 ~~~~v~~~~~~~~f~p~~i~V~~Gd~V~~~vtn~~~-s~Dv~H~f~ip~~~---------v-~~~~~PG~t~~~~f~~~~ 103 (131)
T d1qnia1 35 NKVRVYMTSVAPQYGMTDFKVKEGDEVTVYITNLDM-VEDVTHGFCMVNHG---------V-SMEISPQQTASVTFTAGK 103 (131)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCC-STTCCEEEEETTTT---------E-EEEECTTCEEEEEEECCS
T ss_pred CceeEEEEEeccCCccceEEecCCCEEEEEEEccCC-CCcceEEEEEeccC---------c-ccccCCCceEEEEEEcCC
Confidence 445667889999999999999999999999999876 34456666654322 1 124789999999999999
Q ss_pred CcceEEeccc--c-hhhhcCceeEEEEeC
Q psy16562 174 SGTFFYHSHV--G-LQKMDGLEGSMIIRT 199 (445)
Q Consensus 174 ~GT~wYH~H~--~-~q~~~Gl~G~lIV~~ 199 (445)
+|+|||||+. + .| .+|.|.|+|++
T Consensus 104 ~G~y~~~C~~~cg~~H--~~M~g~i~Vep 130 (131)
T d1qnia1 104 PGVYWYYCNWFCHALH--MEMVGRMLVEA 130 (131)
T ss_dssp SEEEEEECCSCCSTTG--GGCEEEEEEEC
T ss_pred CEEEEEECccccCcch--hcCeeEEEEEe
Confidence 9999999985 2 33 48999999986
|
| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=1.5e-10 Score=98.98 Aligned_cols=95 Identities=13% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
...++|||+...+ .|.+.++.|+++||+|+|.+.....+.+++|||.+.. .+...+++.|.||+
T Consensus 46 ~~~~tiNG~~~~~--------~p~l~~~~gd~v~~~l~n~g~~~~~h~~H~hg~~~~~--------~~~~~dt~~i~pg~ 109 (146)
T d1kcwa2 46 NRMYSVNGYTFGS--------LPGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPAT 109 (146)
T ss_dssp TEEEESSSCCSSC--------CCCCEEETTEEEEEEEECCCSTTCCEEEEETTSCCCC--------SSSCCSEEEECTTC
T ss_pred cceEEECCccCCC--------CCcceEecCCeEEEEEEEcCCCCcccceEeeeeeeec--------cCCCcceEEecCCC
Confidence 3578999996643 3679999999999999999875556788888887752 24557899999999
Q ss_pred eEEEEEecCCCCceEEEEEEec---CCCceeeEEE
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVL 356 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail 356 (445)
++++.+++++ ||+|++|||.. ..++.+..++
T Consensus 110 ~~~v~f~~~~-pG~w~~HCH~~~H~~~GM~~~~~V 143 (146)
T d1kcwa2 110 LFDAYMVAQN-PGEWMLSCQNLNHLKAGLQAFFQV 143 (146)
T ss_dssp EEEEEEEECS-CEEEEEEECCHHHHHTCCEEEEEE
T ss_pred EEEEEEEcCC-CeeEEEEcCCHHHHhcCCeEEEEE
Confidence 9999999998 79999999987 3566555444
|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.11 E-value=2.4e-11 Score=105.89 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=70.5
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE---ccCCCcceeeEecEEE-ec
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI---ASDGTAVEPLVVDSVT-LF 321 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi---a~DG~~v~P~~~~~~~-I~ 321 (445)
..++|||+ +|+|+|++++|++++++|.|..... .. +||+|++.+. ..||... ..++. +.
T Consensus 56 ~~~~~NG~----------~PGPtI~~~~Gd~v~v~l~N~l~~~-~~--~ih~Hg~~~~~~~~~~g~~~----~~~~~i~~ 118 (162)
T d2q9oa1 56 KVMLINGN----------IMGPNIVANWGDTVEVTVINNLVTN-GT--SIHWHGIHQKDTNLHDGANG----VTECPIPP 118 (162)
T ss_dssp EEEEETTB----------SSCCCEEEETTCEEEEEEEEECSSC-CB--CEEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred eEEEECCc----------ccCCeEEEECCcEEEEEEEecCccc-cc--ccccccccccCCCcCCCCcc----cccceecC
Confidence 47899998 7789999999999999999987542 22 3566666553 2366332 23333 46
Q ss_pred CCceEEEEEecCCCCceEEEEEEec---CCCceeeEEEE
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVLQ 357 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail~ 357 (445)
||+++++.+.+++ +|+||||+|.. ..++.+..||+
T Consensus 119 pg~~~~y~f~~~~-~Gt~wYH~H~~~q~~~Gl~G~~iV~ 156 (162)
T d2q9oa1 119 KGGQRTYRWRARQ-YGTSWYHSHFSAQYGNGVVGTIQIN 156 (162)
T ss_dssp TTEEEEEEEECCS-CEEEEEEECSTTGGGGTCEEEEEEE
T ss_pred CCCEEEeeecCCC-CEEEEeecCCHHHHhCCCEEEEEEC
Confidence 7999999999988 79999999987 46777776664
|
| >d2q9oa2 b.6.1.3 (A:163-343) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=99.11 E-value=3.4e-11 Score=106.58 Aligned_cols=64 Identities=25% Similarity=0.284 Sum_probs=55.8
Q ss_pred CCCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 381 KDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 381 ~~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
..+....+...+++++|++|||||||++... +|.|+|+||.|+||+.||.+++|..+|+|.|.|
T Consensus 44 ~~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~id~h~~~via~DG~~v~P~~~~~~~i~~ 107 (181)
T d2q9oa2 44 NPNTGEGQYANVTLTPGKRHRLRILNTSTEN-HFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAV 107 (181)
T ss_dssp CTTTCCBCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred CCCCCCCcceEEEECCCCEEEEEEecccCCc-cEEEEECCceEEEEEeCCeEccceEeCEEEecC
Confidence 3444444555799999999999999998776 799999999999999999999999999999876
|
| >d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=99.09 E-value=4.1e-11 Score=105.27 Aligned_cols=63 Identities=33% Similarity=0.616 Sum_probs=55.4
Q ss_pred CCCCCCccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 382 DNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 382 ~~~~~~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+....+...++|++|++|||||||++... .|.|+|++|.|+||+.||.+++|..+|+|.|+|
T Consensus 46 ~~~~~~~~~~~~v~~g~~~rlR~iN~~~~~-~~~~~i~~H~~~via~DG~~v~P~~~~~l~i~~ 108 (172)
T d1hfua2 46 VGGPAAELSIVNVEQGKKYRMRLISLSCDP-NWQFSIDGHELTIIEVDGELTEPHTVDRLQIFT 108 (172)
T ss_dssp TTCCCCCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCCCCCCceEEEECCCCEEEEEEeeecCCc-eEEEEeCCCeEEEEEeCCEEcccEEeceEeccC
Confidence 333334556799999999999999998876 799999999999999999999999999999976
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.09 E-value=2e-10 Score=100.02 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=79.9
Q ss_pred EEEEECCCCCCCe----EEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc------cccCCCCCCceEEE
Q psy16562 99 AILSINRQLPGPS----IQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV------TQCPIPSSTTFRYK 168 (445)
Q Consensus 99 ~~~~~Ng~~PGPt----I~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~------tq~pI~pG~~~~Y~ 168 (445)
..+++||...+++ |+|+.||+|+|- |.-++..+++|.||.+...- |.+|.+.. .--.|+||+....+
T Consensus 51 t~vvFNG~v~altg~~~l~akvGErV~i~--~~~~n~~s~fHliG~hFD~V-~~~G~~~~~p~~~~qTv~VppG~a~~ve 127 (173)
T d2bw4a2 51 THIVFNGAVGALTGDHALTAAVGERVLVV--HSQANRDTRPHLIGGHGDYV-WATGKFRNPPDLDQETWLIPGGTAGAAF 127 (173)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEE--EEESSSCBCEEEETCCEEEE-ETTCCTTSCCEEEESCCCBCTTEEEEEE
T ss_pred CEEEECCCccccccccCcccccCCeEEEE--ecCCCCCccceeccceeEEE-CCCCcccCCCcCCceeEEccCCccEEEE
Confidence 5689999999997 999999998764 33345789999999986432 56665321 11358999999999
Q ss_pred EecCCCcceEEeccc-chhhhcCceeEEEEeCCCC
Q psy16562 169 FPAMPSGTFFYHSHV-GLQKMDGLEGSMIIRTPKT 202 (445)
Q Consensus 169 f~~~~~GT~wYH~H~-~~q~~~Gl~G~lIV~~~~~ 202 (445)
|+.+++|+|.||||. ..+...||.|.|.|+.+..
T Consensus 128 ~~f~~PG~y~~v~H~l~ea~~~G~~g~l~V~G~~~ 162 (173)
T d2bw4a2 128 YTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 162 (173)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEecCceEEEEEechHHHHHhCCCEEEEEEcCCCC
Confidence 999999999999997 4556789999999987743
|
| >d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=99.06 E-value=8.5e-11 Score=102.96 Aligned_cols=58 Identities=38% Similarity=0.692 Sum_probs=53.2
Q ss_pred CccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 387 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 387 ~~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
.+...++|++||+|||||||++... .|.|+|++|.|+||+.||.+++|..+|+|.|+|
T Consensus 53 ~~~~~~~v~~g~~~rlRlIN~~~~~-~~~~~id~h~~~via~DG~~v~P~~~d~l~i~~ 110 (170)
T d1gyca2 53 AALAVINVQHGKRYRFRLVSISCDP-NYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFA 110 (170)
T ss_dssp SCCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCceEEEECCCCEEEEEEeecCCCc-eeeEEeCCCeEEEEEeCCeeccceEeeEEEecC
Confidence 3455799999999999999999876 899999999999999999999999999999976
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.05 E-value=1.8e-09 Score=93.82 Aligned_cols=142 Identities=13% Similarity=0.102 Sum_probs=104.3
Q ss_pred ccccCCcceEEEEeeeeccCCCC-ccCCCCC-----------CCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcE
Q psy16562 209 LYDFDLYSHVIIVTDWMHSMTDS-KFPGNTY-----------NDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKR 276 (445)
Q Consensus 209 ~~d~d~~e~~l~l~D~~~~~~~~-~~~~~~~-----------~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~ 276 (445)
+..+|. |+.+.-+|+|...+.. .+. .+. .+.+..|+.+.+||+....+ .-..++++.|++
T Consensus 4 ~~~yD~-~yyv~e~d~Y~p~d~~g~~~-~~~~~~~~~~d~~~~m~~~~P~~vvFNG~~galt------~~~~l~akvGe~ 75 (177)
T d1oe1a2 4 PLHYDR-AYTIGEFDLYIPKGPDGKYK-DYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT------GANALTAKVGET 75 (177)
T ss_dssp BCCCSE-EEEEEEEEECCCBCTTSSBC-CCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCE
T ss_pred Ccccce-EEEecccEeecCCCCCCCcc-ccCChhhcchhHHHHHhccCCcEEEECCcccccc------CCCCcccccCCe
Confidence 344553 8999999999843221 111 111 11236899999999865321 123699999999
Q ss_pred EEEEEEccCCCceeEEEEecccceEEEccCCCcce-ee-EecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCcee
Q psy16562 277 YLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PL-VVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITA 352 (445)
Q Consensus 277 ~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~-~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~ 352 (445)
||| +|++.. ....+|++|+.|..+..+|.... |. .++++.|.||++..+.+++++ ||.|.+++|.. ......
T Consensus 76 Vri--~~~~~N-~~ssfHlIG~hfD~V~~~G~~~n~p~~~~qT~~V~pG~~~~v~~tf~~-PG~Y~fV~H~L~ea~~~Ga 151 (177)
T d1oe1a2 76 VLL--IHSQAN-RDTRPHLIGGHGDWVWETGKFANPPQRDLETWFIRGGSAGAALYTFKQ-PGVYAYLNHNLIEAFELGA 151 (177)
T ss_dssp EEE--EEEESS-SCBCEEETTCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSC
T ss_pred EEE--EecCCC-CCccceecccccceEccCCeeCCCCCcCceeEEecCCccEEEEEEecC-ceEEEEEecHHHHHHhcCC
Confidence 876 455554 36688999999999999998876 43 568999999999999999987 89999999976 345667
Q ss_pred eEEEEEcCCC
Q psy16562 353 EAVLQYEGEK 362 (445)
Q Consensus 353 ~ail~y~~~~ 362 (445)
.++|.+.|..
T Consensus 152 ~g~l~V~G~~ 161 (177)
T d1oe1a2 152 AGHIKVEGKW 161 (177)
T ss_dssp EEEEEEESCC
T ss_pred eEEEEecCCC
Confidence 7888888764
|
| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.05 E-value=2e-10 Score=99.35 Aligned_cols=93 Identities=13% Similarity=0.209 Sum_probs=66.6
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc-CCCcceeeEecEEEec
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS-DGTAVEPLVVDSVTLF 321 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~-DG~~v~P~~~~~~~I~ 321 (445)
.....+++||+ .|+|+|++++|+++++||.|.... +++|++.+-+. |+..- .....|.
T Consensus 50 ~~~~~~~~NG~----------~PGP~I~v~~GD~V~i~l~N~~~~-------~~~Hg~~~h~~~~~~~~----~~~~~i~ 108 (157)
T d2bw4a1 50 TEIHAMTFNGS----------VPGPLMVVHENDYVELRLINPDTN-------TLLHNIDFHAATGALGG----GALTQVN 108 (157)
T ss_dssp CEEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTC-------CSCBCCEETTSCSGGGG----GGGCCBC
T ss_pred eEEEEEEECCc----------cCCceEEEECCcEEEEEEEeCCCC-------cceEeeeecccCCCcCC----cceeeEC
Confidence 35567999998 678999999999999999997543 24444444222 32211 1112389
Q ss_pred CCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEE
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQ 357 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~ 357 (445)
|||+++|.|++++ +|+||||||.. ..++.+..|+.
T Consensus 109 PGet~ty~f~a~~-pGt~~YH~H~~~~~~~h~~~Gl~G~~iV~ 150 (157)
T d2bw4a1 109 PGEETTLRFKATK-PGVFVYHCAPEGMVPWHVTSGMNGAIMVL 150 (157)
T ss_dssp TTEEEEEEEECCS-CEEEEEECCCTTCHHHHHHTTCEEEEEEE
T ss_pred cCCEEeEEEECCC-CccceEEECCCCchHHHHhCCCEEEEEEe
Confidence 9999999999987 89999999954 26676666653
|
| >d1sdda2 b.6.1.3 (A:181-296) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.02 E-value=6.7e-12 Score=103.38 Aligned_cols=85 Identities=12% Similarity=0.090 Sum_probs=57.9
Q ss_pred CCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCc
Q psy16562 245 PDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGD 324 (445)
Q Consensus 245 ~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGe 324 (445)
+..++|||+..++ .|.++++.|+++||+|+|.+.....+.+++||+.+.+ + +...+++.|.||+
T Consensus 21 ~~~~tiNG~~~~~--------~~~~~v~~Gd~v~~~v~n~g~~~~~h~iH~Hg~~f~~---~-----~~~~dtv~i~pg~ 84 (116)
T d1sdda2 21 SLMYTVNGYVNGT--------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---N-----HHKISAITLVSAT 84 (116)
T ss_dssp CEEECSSSCCSSC--------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---T-----TEECSCCCEETTC
T ss_pred CcEEEECCCcCCC--------CCCeEEeCCCEEEEEEeccccCCCceeEEEecccccc---C-----CcccceEeecccE
Confidence 3579999997643 3578999999999999999866446778888888876 2 3567889999999
Q ss_pred eEEEEEecCCCCceEEEEEEec
Q psy16562 325 RVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 325 R~dv~v~~~~~~G~y~~~~~~~ 346 (445)
++++.++++. ||+|++|||..
T Consensus 85 ~~~v~~~a~~-pG~w~~HCH~~ 105 (116)
T d1sdda2 85 STTANMTVSP-EGRWTIASLIP 105 (116)
T ss_dssp CBC---------CCCCCBCCST
T ss_pred EEEEEEEcCC-CeEEEEEcCCH
Confidence 9999999987 89999999976
|
| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Rusticyanin species: Thiobacillus ferrooxidans [TaxId: 920]
Probab=99.02 E-value=2.1e-10 Score=98.76 Aligned_cols=102 Identities=8% Similarity=-0.080 Sum_probs=78.8
Q ss_pred CCCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce-eeEecEEEec
Q psy16562 243 IKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-PLVVDSVTLF 321 (445)
Q Consensus 243 ~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P~~~~~~~I~ 321 (445)
.....+.+||+. +|+|+|++|++++|+|+|.+... ++.|+||+|+..+.+.++.... +....+..+.
T Consensus 47 ~~~~~~~~~~~~-----------~Pti~v~~Gd~V~i~v~N~~~~~-~H~~~ih~~g~~~~~~~~~~~~~~~~~~~~~v~ 114 (153)
T d1e30a_ 47 FPFPSFEVHDKK-----------NPTLEIPAGATVDVTFINTNKGF-GHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPK 114 (153)
T ss_dssp SCSSCEEETTEE-----------SCEEEECTTCEEEEEEEECCTTC-CCCCEEESCCSSCCSSCCCCSEEEEBCCCCCCB
T ss_pred cccceeecCCCc-----------CCeEEEeCCCEEEEEEEeCCCCC-cccEEEEcCCCCccccccccccCCCccceeeec
Confidence 345667888863 36999999999999999986532 5677788888887777665553 4456778899
Q ss_pred CCceEEEEEecCCCCceEEEEEEec---CCCceeeEEE
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL---CDSITAEAVL 356 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~---~~~~~~~ail 356 (445)
|||++.+.|.+.+.+|+||||||.. ..++.+..|+
T Consensus 115 pg~~~~~~f~~~~~pGty~YhCh~~~H~~~GM~G~iiV 152 (153)
T d1e30a_ 115 DGKFGYTNFTWHPTAGTYYYVCQIPGHAATGQFGKIVV 152 (153)
T ss_dssp TTEEEEEEEEECCCSEEEEEECCSTTTTTTTCEEEEEE
T ss_pred CCCEEEEEEEeCCCCeEEEEeCCchhHHHCCCEEEEEE
Confidence 9999999998666689999999876 3566666554
|
| >d2bw4a2 b.6.1.3 (A:166-338) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=99.02 E-value=1.2e-10 Score=101.46 Aligned_cols=142 Identities=13% Similarity=0.120 Sum_probs=102.0
Q ss_pred cccCCcceEEEEeeeeccCCCC-ccCC----------CCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCcEEE
Q psy16562 210 YDFDLYSHVIIVTDWMHSMTDS-KFPG----------NTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYL 278 (445)
Q Consensus 210 ~d~d~~e~~l~l~D~~~~~~~~-~~~~----------~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~r 278 (445)
.-+|. |+.+.-+|+|...... .+.. ....+.+..|+.+++||+...-+ -.-.++++.|+|||
T Consensus 5 ~~yD~-~~y~~~~d~Y~p~d~~g~~~~~~~~~~~~~d~~~~m~~~~Pt~vvFNG~v~alt------g~~~l~akvGErV~ 77 (173)
T d2bw4a2 5 LTYDK-IYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALT------GDHALTAAVGERVL 77 (173)
T ss_dssp ECCSE-EEEEEEEEECCCBCTTSCBCCCCSHHHHHHHHHHHHHTTCCSEEEETTSTTTTS------GGGCEEEETTCEEE
T ss_pred cccce-EEEecccEeecCCCCCCCccCcCChhhcchhHHHHHhccCCCEEEECCCccccc------cccCcccccCCeEE
Confidence 44553 8999999999643221 1110 00112246799999999754211 11369999999875
Q ss_pred EEEEccCCCceeEEEEecccceEEEccCCCcce-e-eEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCceeeE
Q psy16562 279 MRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-P-LVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSITAEA 354 (445)
Q Consensus 279 lRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P-~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~~~a 354 (445)
|+|++.. ....+|++|+.|.++..+|.... | ..++++.|.||++..+.+++++ ||.|.+|||.. .......+
T Consensus 78 --i~~~~~n-~~s~fHliG~hFD~V~~~G~~~~~p~~~~qTv~VppG~a~~ve~~f~~-PG~y~~v~H~l~ea~~~G~~g 153 (173)
T d2bw4a2 78 --VVHSQAN-RDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ-PGVYAYVNHNLIEAFELGAAG 153 (173)
T ss_dssp --EEEEESS-SCBCEEEETCCEEEEETTCCTTSCCEEEESCCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTSCEE
T ss_pred --EEecCCC-CCccceeccceeEEECCCCcccCCCcCCceeEEccCCccEEEEEEecC-ceEEEEEechHHHHHhCCCEE
Confidence 4565544 35578899999999999999875 3 3567999999999999999997 89999999975 34455777
Q ss_pred EEEEcCCC
Q psy16562 355 VLQYEGEK 362 (445)
Q Consensus 355 il~y~~~~ 362 (445)
+|.+.+..
T Consensus 154 ~l~V~G~~ 161 (173)
T d2bw4a2 154 HFKVTGEW 161 (173)
T ss_dssp EEEEESCC
T ss_pred EEEEcCCC
Confidence 88888764
|
| >d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.99 E-value=2e-10 Score=100.40 Aligned_cols=57 Identities=40% Similarity=0.747 Sum_probs=52.3
Q ss_pred ccceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 388 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 388 ~~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
+...++|++|++|||||||++... .|.|+|++|.|+||+.||.+++|..+|++.|+|
T Consensus 53 ~~~~~~v~~g~~~rlRlina~~~~-~~~~~id~H~~~Via~DG~~v~P~~~d~i~i~~ 109 (168)
T d1v10a2 53 QLAVVSVQSGKRYRFRIVSTSCFP-NYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFA 109 (168)
T ss_dssp CCCEEEECTTCEEEEEEEECCSSC-CEEEEETTCCEEEEEETTEEEEEEEESBEEECT
T ss_pred CceEEEECCCCEEEEEEEecccCc-eEEEEECCCeEEEEEeCCeecCceEEeEEEEcc
Confidence 344689999999999999998876 699999999999999999999999999999976
|
| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Neisseria gonorrhoeae, AniA [TaxId: 485]
Probab=98.95 E-value=5.4e-10 Score=96.00 Aligned_cols=91 Identities=12% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~P~~~~~~~I~p 322 (445)
....++|||+ .|+|+|+++.|+++++++.|.....+ +|+|.+... ..||... ...|.|
T Consensus 45 ~~~~~~~Ng~----------~pGP~i~v~~Gd~v~v~~~N~~~~~~-----~H~~~~h~~~~~~~~~~------~~~i~P 103 (151)
T d1kbva1 45 EYRYWTFDGD----------VPGRMIRVREGDTVEVEFSNNPSSTV-----PHNVDFHAATGQGGGAA------ATFTAP 103 (151)
T ss_dssp EEEEEEETTB----------SSCCBEEEETTCEEEEEEEECTTCSS-----CBCCEETTCCSGGGGTT------TTCBCT
T ss_pred EEEEEEECCc----------cCCCeEEEECCCEEEEEEEcCCCCce-----eeeccccccccCCCCcc------eeeeCC
Confidence 4568999998 67899999999999999999765432 344444322 1233221 123789
Q ss_pred CceEEEEEecCCCCceEEEEEEec------CCCceeeEEE
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL------CDSITAEAVL 356 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~------~~~~~~~ail 356 (445)
|++++|.|++++ +|+||||||.. ..++.+..|+
T Consensus 104 G~t~~y~f~a~~-~Gt~~YH~H~~~~~~h~~~Gm~G~liV 142 (151)
T d1kbva1 104 GRTSTFSFKALQ-PGLYIYHCAVAPVGMHIANGMYGLILV 142 (151)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCSSHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEeCCC-CeEEEEECCCCChHHHHhCCCEEEEEE
Confidence 999999999988 89999999953 2667666555
|
| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.94 E-value=8.3e-10 Score=94.98 Aligned_cols=91 Identities=10% Similarity=0.157 Sum_probs=65.0
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecC
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFP 322 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~p 322 (445)
....+++||+ .|+|+|++++||++++++.|...... .|+|.+.... .||... ...|.|
T Consensus 49 ~~~~~t~NG~----------~PGPti~v~~Gd~v~i~~~N~~~~~~-----~H~~~~h~~~~~~~~~~------~~~i~P 107 (153)
T d1mzya1 49 YLQAMTFDGS----------IPGPLMIVHEGDYVELTLINPPENTM-----PHNIDFHAATGALGGGG------LTLINP 107 (153)
T ss_dssp EEEEEEETTB----------SSCCEEEEETTCEEEEEEEECTTCCS-----CBCCEETTSCSGGGGGG------GCCBCT
T ss_pred EEEEEEECCC----------cCCCcEEEeCCCEEEEEEEcCCCCce-----EccCccccCCcCCCCCc------cccccC
Confidence 4467899999 67899999999999999999754322 3444443221 233211 124899
Q ss_pred CceEEEEEecCCCCceEEEEEEec--------CCCceeeEEE
Q psy16562 323 GDRVDVIIHTNQSNNLYWMQAKTL--------CDSITAEAVL 356 (445)
Q Consensus 323 GeR~dv~v~~~~~~G~y~~~~~~~--------~~~~~~~ail 356 (445)
||+++|.|++++ +|+||||||.. ..++.+..|+
T Consensus 108 G~t~ty~f~a~~-~Gt~~YH~H~~~~~~~~h~~~Gm~G~~iV 148 (153)
T d1mzya1 108 GEKVVLRFKATR-AGAFVYHCAPGGPMIPWHVVSGMAGCIMV 148 (153)
T ss_dssp TEEEEEEEECCS-CEEEEEECCCSTTHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEEcCC-CceEEEEeCCcccccHhHHhCCCEEEEEE
Confidence 999999999987 89999999953 2566666555
|
| >d1aoza2 b.6.1.3 (A:130-338) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.92 E-value=4.4e-10 Score=101.83 Aligned_cols=56 Identities=34% Similarity=0.603 Sum_probs=51.9
Q ss_pred cceeEeeCCcEEEEEEEcCCCCccceEEEEeCeeEEEEecCCccCCCeEEeEEEecC
Q psy16562 389 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFP 445 (445)
Q Consensus 389 ~~~~~v~~G~~~~~rliN~s~~~Hp~~~hihgh~f~Vi~~dG~~~~p~~~Dtv~v~p 445 (445)
...++|++|++|||||||++... +|.|+|+||.|+||+.||.+++|..+|.|.|+|
T Consensus 74 ~~~~~v~~g~~~RlRliNa~~~~-~~~~~idgh~~~VIa~DG~~v~P~~v~~l~i~p 129 (209)
T d1aoza2 74 PYIFHVSPKKTYRIRIASTTALA-ALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYS 129 (209)
T ss_dssp CCCEEECTTCEEEEEEEECCSSC-EEEEEETTCCEEEEEETTEEEEEEEESCEEECT
T ss_pred ceEEEEcCCCEEEEEEEecCCce-eEEEEeCCCcEEEEecCCEEcccceeeeEEEcc
Confidence 34689999999999999999876 789999999999999999999999999999986
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=1.7e-09 Score=95.38 Aligned_cols=93 Identities=19% Similarity=0.192 Sum_probs=72.3
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---eeEecEEEecC
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 322 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~~~~~I~p 322 (445)
..++|||+.+..+ .|.++++.|+++||+|+|.+... .+-|+||||.|+|++.+|.+.+ +...|++.|.|
T Consensus 71 ~~~tING~~f~~~-------~p~~~~~~G~~erw~i~N~~~~~-~HP~HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~ 142 (181)
T d1kv7a3 71 HANKINGQAFDMN-------KPMFAAAKGQYERWVISGVGDMM-LHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEG 142 (181)
T ss_dssp GCEEETTBCCCTT-------CCSEECCSSSCEEEEEECTTCCC-CEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEESS
T ss_pred cceeECCEecCCC-------CCceEeCCCCEEEEEEEeCCCCC-ccCceEeceEEEEEecccCCccccCCcceeEEEeCC
Confidence 5689999987421 35799999999999999998642 4678899999999999998774 45679999977
Q ss_pred Cce-EEEEEecCC-CCceEEEEEEec
Q psy16562 323 GDR-VDVIIHTNQ-SNNLYWMQAKTL 346 (445)
Q Consensus 323 GeR-~dv~v~~~~-~~G~y~~~~~~~ 346 (445)
|+. +.+.|.++. .+|.|.+|||..
T Consensus 143 ~~~~v~v~f~~~~~~~G~w~fHCHil 168 (181)
T d1kv7a3 143 NVSEVLVKFNHDAPKEHAYMAHCHLL 168 (181)
T ss_dssp SEEEEEECCCSCCCGGGCEEEEESSH
T ss_pred CceEEEEEEEeeCCCCCeEEEeCChH
Confidence 753 344444443 258999999987
|
| >d1kv7a3 b.6.1.3 (A:336-516) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=6.7e-10 Score=98.00 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=47.5
Q ss_pred eeEeeCCcEEEEEEEcCCC-CccceEEEEeCeeEEEEecCCccCC---CeEEeEEEecC
Q psy16562 391 FFKVQRDKRYLMRIIGGSC-LACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFP 445 (445)
Q Consensus 391 ~~~v~~G~~~~~rliN~s~-~~Hp~~~hihgh~f~Vi~~dG~~~~---p~~~Dtv~v~p 445 (445)
.++++.|+++||+|+|.+. +.||| |||||+|+|++.+|.+++ +.|+|||.|.|
T Consensus 86 ~~~~~~G~~erw~i~N~~~~~~HP~--HlHG~~F~Vl~~~g~~~~~~~~~~kDTv~v~~ 142 (181)
T d1kv7a3 86 MFAAAKGQYERWVISGVGDMMLHPF--HIHGTQFRILSENGKPPAAHRAGWKDTVKVEG 142 (181)
T ss_dssp SEECCSSSCEEEEEECTTCCCCEEE--EETTCCBEEEEBTTBCCCGGGSSSBSEEEESS
T ss_pred ceEeCCCCEEEEEEEeCCCCCccCc--eEeceEEEEEecccCCccccCCcceeEEEeCC
Confidence 4789999999999999985 57888 999999999999999885 57999999965
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.83 E-value=5.9e-09 Score=87.99 Aligned_cols=92 Identities=12% Similarity=0.127 Sum_probs=64.8
Q ss_pred CCCCeEEEEcCCEEEEEEEecCC-CCCceEeeCCcc----------------c--CCCCCCCCCCcccccCCCCCCceEE
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMI-DREVTLHWHGVY----------------Q--KVTPWMDGVPMVTQCPIPSSTTFRY 167 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~-~~~tsiHwHG~~----------------~--~~~~~~DGvp~~tq~pI~pG~~~~Y 167 (445)
|--.+|+|+.||+|++.+.|.-. ..+++++..... . ...+.++.+-..| -.+.||++.++
T Consensus 29 F~p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t-~~~~pg~s~~i 107 (139)
T d1qhqa_ 29 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWT-AMLNAGESGSV 107 (139)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEEC-CCBCTTEEEEE
T ss_pred EcCCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccc-cccCCcceEEE
Confidence 54569999999999999999753 134444432211 0 0001111111112 24789999999
Q ss_pred EEecCCCcceEEecccchhhhcCceeEEEEeC
Q psy16562 168 KFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 168 ~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
.|+++++|+||||||...|...||.|.|+|.+
T Consensus 108 ~f~~~~~G~y~f~Ct~pgH~~~GM~G~i~V~P 139 (139)
T d1qhqa_ 108 TFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 139 (139)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEecCCCeEEEEEcCCcCcccccCeEEEEEcC
Confidence 99999999999999998899999999999964
|
| >d1gska1 b.6.1.3 (A:2-182) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.79 E-value=1.4e-09 Score=96.28 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=75.6
Q ss_pred CCCeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCce------------------eEEEEecccceEEEc-
Q psy16562 244 KPDAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLAC------------------PLIFTIEKHQLQVIA- 304 (445)
Q Consensus 244 ~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~------------------~~~~~i~gh~~~via- 304 (445)
....+.+||+ .|+|+|++++|+++++|+.|...... ....+||+|++.+-.
T Consensus 44 ~~~~~~ynG~----------~PGPtI~v~~Gd~v~v~~~N~Lp~~~~~~~~~~~~~~~~~~~~~~~~t~iH~HG~~~~~~ 113 (181)
T d1gska1 44 PTRLWGYNGL----------FPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTPDD 113 (181)
T ss_dssp CEEEEEETTB----------SSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTCC-------CCSCCBCEEEETCCCCGG
T ss_pred ceeEEEECCc----------cCCCeEEEeCCeEEEEEEEeCCCcCccccccccccccccccccCCCcceeeeeccccCCc
Confidence 4467899998 78999999999999999999863210 113457888888754
Q ss_pred cCCCcceeeE-ecEEEecCCceEEEEEecCCCCceEEEEEEec-------CCCceeeEEEE
Q psy16562 305 SDGTAVEPLV-VDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL-------CDSITAEAVLQ 357 (445)
Q Consensus 305 ~DG~~v~P~~-~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~-------~~~~~~~ail~ 357 (445)
.||.+..... .......+|+++++.+.+++++|+||||+|.. ..++.+..||+
T Consensus 114 ~DG~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~Gt~WYH~H~~g~t~~qv~~GL~G~~iV~ 174 (181)
T d1gska1 114 SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIH 174 (181)
T ss_dssp GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCSEEEEEEECCTTTHHHHHHHTCEEEEEEE
T ss_pred cCCCcccccccCcccCCCCCcceeEEeecCCCCEEEEeCCCCCCCcHHHHhcCCEEEEEEC
Confidence 5887643221 12234567889999999998889999999975 15666665554
|
| >d1oe1a2 b.6.1.3 (A:160-336) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Alcaligenes xylosoxidans [TaxId: 85698]
Probab=98.71 E-value=4.1e-08 Score=85.04 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=77.8
Q ss_pred EEEEECCCCCCC----eEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc------cccCCCCCCceEEE
Q psy16562 99 AILSINRQLPGP----SIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV------TQCPIPSSTTFRYK 168 (445)
Q Consensus 99 ~~~~~Ng~~PGP----tI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~------tq~pI~pG~~~~Y~ 168 (445)
....+||..=+. .|+++.|++|+| +.+. ++..++.|.||.+...- |.+|.... -.-.|+||+...-.
T Consensus 51 ~~vvFNG~~galt~~~~l~akvGe~Vri-~~~~-~N~~ssfHlIG~hfD~V-~~~G~~~n~p~~~~qT~~V~pG~~~~v~ 127 (177)
T d1oe1a2 51 SHIVFNGKVGALTGANALTAKVGETVLL-IHSQ-ANRDTRPHLIGGHGDWV-WETGKFANPPQRDLETWFIRGGSAGAAL 127 (177)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEE-EEEE-SSSCBCEEETTCCEEEE-ETTCCTTSCCEEEESBCCBCTTEEEEEE
T ss_pred cEEEECCccccccCCCCcccccCCeEEE-EecC-CCCCccceecccccceE-ccCCeeCCCCCcCceeEEecCCccEEEE
Confidence 467899974333 699999999987 4444 45899999999987532 66664321 12358999999999
Q ss_pred EecCCCcceEEeccc-chhhhcCceeEEEEeCCC
Q psy16562 169 FPAMPSGTFFYHSHV-GLQKMDGLEGSMIIRTPK 201 (445)
Q Consensus 169 f~~~~~GT~wYH~H~-~~q~~~Gl~G~lIV~~~~ 201 (445)
|+.+++|+|.||||. ......|+.|.|.|+.+.
T Consensus 128 ~tf~~PG~Y~fV~H~L~ea~~~Ga~g~l~V~G~~ 161 (177)
T d1oe1a2 128 YTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 161 (177)
T ss_dssp EECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEecCceEEEEEecHHHHHHhcCCeEEEEecCCC
Confidence 999999999999997 455678999999999774
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.66 E-value=5.7e-08 Score=86.92 Aligned_cols=91 Identities=16% Similarity=0.295 Sum_probs=69.9
Q ss_pred CCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc---------ccccCC-CCCCceEEEEecCCCcce
Q psy16562 108 PGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM---------VTQCPI-PSSTTFRYKFPAMPSGTF 177 (445)
Q Consensus 108 PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~---------~tq~pI-~pG~~~~Y~f~~~~~GT~ 177 (445)
.+.+|++..|+.+++.+.|......+.+|+||.....- ..+|.+. .|- -+ ++|+...++|.++.+|.|
T Consensus 68 ~~~v~~~~~~~~~~~v~~~~~~~~~Hp~HlHg~~F~vl-~~~g~~~~~~~~~~~rDtv-~v~~~G~~~~ir~~adnpG~w 145 (200)
T d1hfua3 68 AGSVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVV-SLGVTGDEVTIRFVTDNPGPW 145 (200)
T ss_dssp TTSEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEE-ECTTCCCCCCSSBCEESEE-ECCSTTCEEEEEEECCSCEEE
T ss_pred cCceEEecCCcceEEEEeeccccccCceeecCCcEEEE-eccCCCCCccccCcccceE-EeCCCCEEEEEEEECCCCeee
Confidence 35689999999999999988765789999999874321 1222221 111 25 467788899999999999
Q ss_pred EEecccchhhhcCceeEEEEeCC
Q psy16562 178 FYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 178 wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
.||||...+...||...|+++.+
T Consensus 146 ~~HCHi~~H~~~GM~~~~~~~~~ 168 (200)
T d1hfua3 146 FFHCHIEFHLMNGLAIVFAEDMA 168 (200)
T ss_dssp EEEESSHHHHHTTCEEEEEECHH
T ss_pred EEEeCCChHHhCCCcEEEEEcCC
Confidence 99999999999999888877643
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.60 E-value=1e-07 Score=81.72 Aligned_cols=91 Identities=11% Similarity=0.076 Sum_probs=72.0
Q ss_pred CeEEEccccCCCCCCCCCcccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCc----------------
Q psy16562 246 DAILINGQNQNPKDNSPRVPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTA---------------- 309 (445)
Q Consensus 246 ~~~lING~~~~~~~~~~~~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~---------------- 309 (445)
..++|||+.+.+. ...+++.|.+.+|+|+|.+... +-|+||++.|+|++.+|..
T Consensus 28 ~~~~ing~~~~~~--------~~~~~~~G~~e~W~i~N~~~~~--HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~ 97 (154)
T d1gska3 28 PVLLLNNKRWHDP--------VTETPKVGTTEIWSIINPTRGT--HPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPA 97 (154)
T ss_dssp EEEEETTBCTTSC--------CCBCCBTTCEEEEEEEECSSSC--EEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCC
T ss_pred ceEEECCcCcCCC--------cccccCCCCEEEEEEEeCCCCC--CCEEECCceEEEEEecCCCcccccccccccccCCC
Confidence 3589999977421 2346789999999999998764 6777999999999764421
Q ss_pred -----ceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 310 -----VEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 310 -----v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
.++...|++.|.||+.+.+.+++...+|.|.+|||..
T Consensus 98 ~~~~~~~~~~kDTv~v~pg~~~~i~~~~~d~pG~w~~HCHil 139 (154)
T d1gska3 98 VPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHIL 139 (154)
T ss_dssp BCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCH
T ss_pred cCCCcccCcccccEEeCCCCEEEEEEEeCCCCcceEEecCcc
Confidence 1133579999999999999998655589999999987
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.59 E-value=6.6e-08 Score=85.82 Aligned_cols=88 Identities=19% Similarity=0.308 Sum_probs=66.3
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCC-ccccc-------CCCCCC-ceEEEEecCCCcceEE
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP-MVTQC-------PIPSST-TFRYKFPAMPSGTFFY 179 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp-~~tq~-------pI~pG~-~~~Y~f~~~~~GT~wY 179 (445)
+..+.+..++.++|.+.|. .++.+|.||.+..... .+|.+ ..... -|+||+ ...++|.++.+|.|.|
T Consensus 71 ~~~~~~~~~~~~~i~~~~~---~~HP~HlHG~~F~Vl~-~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~adnpG~w~~ 146 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGG---GNHPFHLHGHNFDVVR-TPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFL 146 (190)
T ss_dssp TTEEEECTTCEEEEEEECC---BSCEEEESSCCEEEEE-CTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEE
T ss_pred ceeEEccCccEEEEEeccC---ccccccccCceEEEEE-cCCCcccccccCcccCEEEeCCCeEEEEEEEEcCCCeeEEE
Confidence 5578999999999998885 4689999999763321 22221 11111 266764 6679999999999999
Q ss_pred ecccchhhhcCceeEEEEeCC
Q psy16562 180 HSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 180 H~H~~~q~~~Gl~G~lIV~~~ 200 (445)
|||...|...||...|++..+
T Consensus 147 HCHi~~H~~~GM~~~~~~~~~ 167 (190)
T d1v10a3 147 HCHIDWHLEAGLAVVFAEDIP 167 (190)
T ss_dssp EESCHHHHTTTCEEEEEESGG
T ss_pred ecCchhhhhCCCcEEEEECCC
Confidence 999999999999999988654
|
| >d1gska3 b.6.1.3 (A:357-510) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.59 E-value=4.5e-08 Score=83.97 Aligned_cols=99 Identities=21% Similarity=0.200 Sum_probs=74.6
Q ss_pred EEEEEECCC-CCCC-eEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCC---------------CCCCCC--------
Q psy16562 98 RAILSINRQ-LPGP-SIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP---------------WMDGVP-------- 152 (445)
Q Consensus 98 ~~~~~~Ng~-~PGP-tI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~---------------~~DGvp-------- 152 (445)
+.+|++||+ +.-| +..++.|.+.+.++.|... .++.+|.||.+...-. ..+|..
T Consensus 27 ~~~~~ing~~~~~~~~~~~~~G~~e~W~i~N~~~-~~HP~HiHg~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (154)
T d1gska3 27 RPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEK 105 (154)
T ss_dssp CEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGS
T ss_pred CceEEECCcCcCCCcccccCCCCEEEEEEEeCCC-CCCCEEECCceEEEEEecCCCcccccccccccccCCCcCCCcccC
Confidence 567999987 4444 5678999999999999776 7899999997642210 000000
Q ss_pred --cccccCCCCCCceEEEEe-cCCCcceEEecccchhhhcCceeEEEEe
Q psy16562 153 --MVTQCPIPSSTTFRYKFP-AMPSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 153 --~~tq~pI~pG~~~~Y~f~-~~~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
-.| ..|+||++.+.+|+ ++.+|.|.||||...+...||.+.+-|-
T Consensus 106 ~~kDT-v~v~pg~~~~i~~~~~d~pG~w~~HCHil~Hed~GMM~~~~V~ 153 (154)
T d1gska3 106 GWKDT-IQAHAGEVLRIAATFGPYSGRYVWHCHILEHEDYDMMRPMDIT 153 (154)
T ss_dssp SCBSE-EEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEB
T ss_pred ccccc-EEeCCCCEEEEEEEeCCCCcceEEecCcchHhhCcCceEEEEe
Confidence 011 13789999999997 5689999999999999999999998874
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=98.55 E-value=6.1e-08 Score=76.42 Aligned_cols=81 Identities=12% Similarity=0.173 Sum_probs=52.9
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
.+|++++||+| ++.|... ...+++.+..........++.... ...++...+|+|+...+|+|||+|.. |...
T Consensus 18 ~~i~v~~GdtV--~f~n~~~-~~h~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~~~tf~~~G~y~y~C~~--H~~~ 89 (98)
T d2plta_ 18 KTLTIKSGETV--NFVNNAG-FPHNIVFDEDAIPSGVNADAISRD---DYLNAPGETYSVKLTAAGEYGYYCEP--HQGA 89 (98)
T ss_dssp SEEEECTTCEE--EEEECSS-CCEEEEECGGGSCTTCCHHHHCEE---EEECSTTCEEEEECCSCEEEEEECGG--GGGG
T ss_pred CEEEECCCCEE--EEEECCC-CceeEEEecCCccccccCCccccc---ccccCCCceEEEEecCCceEEEEeCc--CCCC
Confidence 69999999986 4667765 566666665443322112221111 22334444556666789999999964 8888
Q ss_pred CceeEEEEe
Q psy16562 190 GLEGSMIIR 198 (445)
Q Consensus 190 Gl~G~lIV~ 198 (445)
||.|.|+|+
T Consensus 90 GM~G~I~Ve 98 (98)
T d2plta_ 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999995
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=98.45 E-value=3.5e-07 Score=81.58 Aligned_cols=91 Identities=14% Similarity=0.196 Sum_probs=67.7
Q ss_pred CCeEEEEcCCEEEEEEEecCC--CCCceEeeCCcccCCCCCCCCCCcc--------cc--cCCCCCCceEEEEecCCCcc
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMI--DREVTLHWHGVYQKVTPWMDGVPMV--------TQ--CPIPSSTTFRYKFPAMPSGT 176 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~--~~~tsiHwHG~~~~~~~~~DGvp~~--------tq--~pI~pG~~~~Y~f~~~~~GT 176 (445)
|..+.+..++.++|.+.|... ...+.+|.||.....-...+|.+.. |. -.++||+...++|.++.+|.
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~adnpG~ 148 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGP 148 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEECCCCee
Confidence 567899999999998887543 2569999999875422122332221 11 12378999999999999999
Q ss_pred eEEecccchhhhcCceeEEEEeC
Q psy16562 177 FFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 177 ~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
|.||||...|...||...+++..
T Consensus 149 w~~HCHi~~H~~~GM~~~~~~~~ 171 (199)
T d1gyca3 149 WFLHCHIDFHLEAGFAIVFAEDV 171 (199)
T ss_dssp EEEEESSHHHHHTTCEEEEEETH
T ss_pred EEEEcCchhhHhccCcEEEEEcC
Confidence 99999999999999998776543
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.44 E-value=1.6e-06 Score=74.32 Aligned_cols=145 Identities=13% Similarity=0.040 Sum_probs=103.3
Q ss_pred CCccccCCcceEEEEeeeeccCCCC-ccCC----------CCCCCCCCCCCeEEEccccCCCCCCCCCcccceEEEecCc
Q psy16562 207 AELYDFDLYSHVIIVTDWMHSMTDS-KFPG----------NTYNDTRIKPDAILINGQNQNPKDNSPRVPMHFFKVQRDK 275 (445)
Q Consensus 207 ~~~~d~d~~e~~l~l~D~~~~~~~~-~~~~----------~~~~~~~~~~~~~lING~~~~~~~~~~~~p~~~i~v~~G~ 275 (445)
..+..+|. |+.|.-+|+|.-.... .+.. ....+....|+.+.+||+..-.+ ..-.++++.|+
T Consensus 6 g~~l~yDr-~yYvge~dfY~p~d~~G~~k~y~~~~~~~~d~~e~m~~l~PthVVFNG~vgalt------g~~aL~AkvGE 78 (178)
T d1mzya2 6 GKPVRYDT-VYYIGESDHYIPKDEDGTYMRFSDPSEGYEDMVAVMDTLIPSHIVFNGAVGALT------GEGALKAKVGD 78 (178)
T ss_dssp SCBCCCSE-EEEEEEEEECCCBCTTSCBCCCSSHHHHHHHHHHHHTTTCCSEEEETTSTTTTS------GGGCEEEETTC
T ss_pred CCccccCe-EEEEecceeecCCCCCCCccccCChhhcchhHHHHHHccCCCEEEECCccCccc------CCCCcccccCC
Confidence 34455664 8999999999743321 1110 00112345799999999865321 11369999999
Q ss_pred EEEEEEEccCCCceeEEEEecccceEEEccCCCcce-e-eEecEEEecCCceEEEEEecCCCCceEEEEEEec--CCCce
Q psy16562 276 RYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE-P-LVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL--CDSIT 351 (445)
Q Consensus 276 ~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~-P-~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~--~~~~~ 351 (445)
+| +|+|++.+ +.-.||+-|-.+.-+-.+|.+.. | ..+.++.|.+|+..-+++++.+ ||.|.+..|.. .....
T Consensus 79 tV--~~~~~gpN-~~SsfHvIGg~~D~V~~~G~~~n~p~~~~qT~~v~~G~a~~~~~tf~~-PG~Y~~VdH~l~~A~~kG 154 (178)
T d1mzya2 79 NV--LFVHSQPN-RDSRPHLIGGHGDLVWETGKFHNAPERDLETWFIRGGTAGAALYKFLQ-PGVYAYVNHNLIEAVHKG 154 (178)
T ss_dssp EE--EEEEEESS-SCBCEEEETCCEEEEETTCCTTSCCEEEESBCCBCTTEEEEEEEECCS-CEEEEEEESSHHHHHTTC
T ss_pred eE--EEecccCC-CCCCcccccCccceEccCCccCCCCCCCceEEEecCCceeEEEEEeCC-CeEEEEEccHHHHHHhCC
Confidence 87 56899976 35577777766765667888775 4 4679999999999999999998 79999999987 34556
Q ss_pred eeEEEEEcCCC
Q psy16562 352 AEAVLQYEGEK 362 (445)
Q Consensus 352 ~~ail~y~~~~ 362 (445)
..++|...+..
T Consensus 155 A~g~l~V~G~~ 165 (178)
T d1mzya2 155 ATAHVLVEGEW 165 (178)
T ss_dssp CEEEEEEESCC
T ss_pred CeEEEEeCCCC
Confidence 77888888754
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=98.41 E-value=1.7e-07 Score=84.58 Aligned_cols=90 Identities=19% Similarity=0.152 Sum_probs=67.7
Q ss_pred eEEEEcCCEEEEEEEecCC-----CCCceEeeCCcccCCCCCCCCCCc-------------c-cccCCCCCCceEEEEec
Q psy16562 111 SIQVCKGDTIIVDVKNHMI-----DREVTLHWHGVYQKVTPWMDGVPM-------------V-TQCPIPSSTTFRYKFPA 171 (445)
Q Consensus 111 tI~v~~GD~v~V~v~N~l~-----~~~tsiHwHG~~~~~~~~~DGvp~-------------~-tq~pI~pG~~~~Y~f~~ 171 (445)
.++++.|+.|+|.+.|.-. ...+.+|.||.+.......+|... . --.-++||+..+.+|.+
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 6899999999999999532 257999999976521111111110 0 00137899999999999
Q ss_pred CCCcceEEecccchhhhcCceeEEEEeCC
Q psy16562 172 MPSGTFFYHSHVGLQKMDGLEGSMIIRTP 200 (445)
Q Consensus 172 ~~~GT~wYH~H~~~q~~~Gl~G~lIV~~~ 200 (445)
+.+|.|.||||...+...||...++|...
T Consensus 160 dnpG~w~~HCH~~~H~~~GM~~~~~v~~~ 188 (214)
T d1aoza3 160 DNPGVWAFHCHIEPHLHMGMGVVFAEGVE 188 (214)
T ss_dssp CSCEEEEEEESSHHHHHTTCEEEEEECGG
T ss_pred CCCeeEEEEECcHHHHhCcCcEEEEEccc
Confidence 99999999999999999999988888643
|
| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Red copper protein nitrosocyanin species: Nitrosomonas europaea [TaxId: 915]
Probab=98.31 E-value=2e-06 Score=69.35 Aligned_cols=63 Identities=10% Similarity=0.126 Sum_probs=52.2
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
+.|+|+.|++|+|++.|.... .+.+.|+++... ..+.||+..++.|++++ +|+|||+|+..
T Consensus 38 ~~i~v~~Gd~V~~~~~n~d~~--~H~~~i~~~~~~----------------~~~~pG~t~~~~f~~~~-~G~y~y~C~~~ 98 (112)
T d1ibya_ 38 ETLVVKKGDAVKVVVENKSPI--SEGFSIDAFGVQ----------------EVIKAGETKTISFTADK-AGAFTIWCQLH 98 (112)
T ss_dssp CEEEEETTCEEEEEEEECSSS--CEEEEEGGGTEE----------------EEECTTCEEEEEEECCS-CEEEEEBCSSS
T ss_pred CEEEEeCCCEEEEEEEeCCCC--ceeeeecccccc----------------cccCCcceEEEEEEecc-ceEEEEECccc
Confidence 479999999999999999854 467778877543 34789999999999987 79999999876
Q ss_pred CC
Q psy16562 347 CD 348 (445)
Q Consensus 347 ~~ 348 (445)
|.
T Consensus 99 ~~ 100 (112)
T d1ibya_ 99 PK 100 (112)
T ss_dssp CT
T ss_pred Ch
Confidence 53
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=98.29 E-value=1.7e-07 Score=74.31 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=48.6
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCC-------CcccccCCCCCCceEEEEecCCCcceEEec
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGV-------PMVTQCPIPSSTTFRYKFPAMPSGTFFYHS 181 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGv-------p~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~ 181 (445)
-++|++++||+|+ ++|... .++++.+. ... ..++. .......+.++...+|.|+...+|||+|+|
T Consensus 16 P~~l~v~~GdtV~--f~n~~~-~~h~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~G~y~Y~C 87 (102)
T d1kdja_ 16 PDSITVSAGEAVE--FTLVGE-TGHNIVFD---IPA--GAPGTVASELKAASMDENDLLSEDEPSFKAKVSTPGTYTFYC 87 (102)
T ss_dssp SSEEEECTTCCEE--EEECSS-SCBCCEEC---CCT--TCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCSCEEEEEEC
T ss_pred CCEEEECCCCEEE--EEECCC-CceeEEEe---cCC--CCCcccccccccCcccccccccCCccEEEEeeCCCceEEEEe
Confidence 3699999999875 567654 23322221 110 00000 001111234455556666777899999999
Q ss_pred ccchhhhcCceeEEEEe
Q psy16562 182 HVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 182 H~~~q~~~Gl~G~lIV~ 198 (445)
.. |...||.|.|+|+
T Consensus 88 ~~--H~~~GM~G~I~Ve 102 (102)
T d1kdja_ 88 TP--HKSANMKGTLTVK 102 (102)
T ss_dssp ST--TGGGTCEEEEEEC
T ss_pred cC--CcccCCeEEEEEC
Confidence 74 8889999999995
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=98.27 E-value=3.5e-07 Score=72.07 Aligned_cols=81 Identities=11% Similarity=0.199 Sum_probs=51.5
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|++++||+|+ +.|... .++++..............+ ....-.+.+|++|+|.| ..+|+|+|+|.. |..
T Consensus 18 P~~i~v~~GdtV~--~~n~~~-~~H~~~~~~~~~~~~~~~~~--~~~~~~~~~g~t~~~tf--~~~G~y~Y~C~~--H~~ 88 (98)
T d1pcsa_ 18 PSTVTIKAGEEVK--WVNNKL-SPHNIVFDADGVPADTAAKL--SHKGLLFAAGESFTSTF--TEPGTYTYYCEP--HRG 88 (98)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCEEEEECCSSSCHHHHHHH--CEEEEECSTTCEEEEEC--CSCEEEEEECGG--GTT
T ss_pred CCEEEECCCCEEE--EeECCC-CccceEEeccccCCCccccc--cccccccCCCcEEEEec--cCCceEEEEecc--CCC
Confidence 4699999999865 557644 45555444211100000000 01122467898888777 579999999954 888
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~gM~G~I~Ve 98 (98)
T d1pcsa_ 89 AGMVGKVVVE 98 (98)
T ss_dssp TTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 8999999995
|
| >d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.27 E-value=2.9e-07 Score=82.38 Aligned_cols=90 Identities=7% Similarity=0.029 Sum_probs=67.2
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEE-ccCCCcce--------eeEecEEEecCCceEEEEEecCC
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVI-ASDGTAVE--------PLVVDSVTLFPGDRVDVIIHTNQ 334 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~vi-a~DG~~v~--------P~~~~~~~I~pGeR~dv~v~~~~ 334 (445)
..+|+|+++.||++++.|.|.+.. + .+||+|++.+- +.||.+.. +....++.|.|||+++|.+++++
T Consensus 83 ~lGP~Ira~~GD~v~V~~~N~~~~--p--~siH~HG~~~~~~~dg~~~~~~~~~~~~~~~~~~~~V~PGet~tY~w~v~~ 158 (207)
T d2j5wa3 83 ILGPVIWAEVGDTIRVTFHNKGAY--P--LSIEPIGVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPK 158 (207)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSS--C--BCCEEESSBCCGGGCSBCCBCC-------CCCCSSCBCTTCEEEEEEECCG
T ss_pred CcCceEEEECCCEEEEEEEECCCC--C--ccccccccccCcccccccccCCCCcccCCcCcccceecCCCEEEEEEEecC
Confidence 567999999999999999999875 3 35788887764 34665432 22235577999999999999887
Q ss_pred CCc---------eEEEEEEec-----CCCceeeEEEE
Q psy16562 335 SNN---------LYWMQAKTL-----CDSITAEAVLQ 357 (445)
Q Consensus 335 ~~G---------~y~~~~~~~-----~~~~~~~ail~ 357 (445)
..| +||||+|.. ..++.+..||.
T Consensus 159 ~~gP~~~d~~c~T~~YHshv~~~~d~~~GL~G~lIV~ 195 (207)
T d2j5wa3 159 EVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMKIC 195 (207)
T ss_dssp GGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEEEE
T ss_pred CCCCccCCCCceeEEEccCCChhHhhccCceEEEEEc
Confidence 544 899999976 25677765553
|
| >d1hfua3 b.6.1.3 (A:304-503) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
Probab=98.23 E-value=6.4e-06 Score=73.16 Aligned_cols=80 Identities=20% Similarity=0.380 Sum_probs=67.9
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc----eeeEecEEEe-cCCceEEEEEecCCCCceE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTL-FPGDRVDVIIHTNQSNNLY 339 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I-~pGeR~dv~v~~~~~~G~y 339 (445)
....+.++.|+.+.+-++|..... .+-||+|||.|.|++.+|... .|...|++.+ .+|++..+.+.++. +|.|
T Consensus 68 ~~~v~~~~~~~~~~~v~~~~~~~~-~Hp~HlHg~~F~vl~~~g~~~~~~~~~~~rDtv~v~~~G~~~~ir~~adn-pG~w 145 (200)
T d1hfua3 68 AGSVYELPRNQVVELVVPAGVLGG-PHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDN-PGPW 145 (200)
T ss_dssp TTSEEEECSSCEEEEEEECCSTTC-CCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCS-CEEE
T ss_pred cCceEEecCCcceEEEEeeccccc-cCceeecCCcEEEEeccCCCCCccccCcccceEEeCCCCEEEEEEEECCC-Ceee
Confidence 356899999999999999888653 577889999999999988653 3777899999 47899999999987 8999
Q ss_pred EEEEEec
Q psy16562 340 WMQAKTL 346 (445)
Q Consensus 340 ~~~~~~~ 346 (445)
.+|||..
T Consensus 146 ~~HCHi~ 152 (200)
T d1hfua3 146 FFHCHIE 152 (200)
T ss_dssp EEEESSH
T ss_pred EEEeCCC
Confidence 9999987
|
| >d1sdda1 b.6.1.3 (A:1-180) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.21 E-value=2.2e-07 Score=81.44 Aligned_cols=93 Identities=10% Similarity=0.070 Sum_probs=65.4
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcce----eeEecEEEecCCceEEEEEecCCC---
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVE----PLVVDSVTLFPGDRVDVIIHTNQS--- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~~~--- 335 (445)
.++|+|+++.||+++++|.|.+.. ++ +||+|++.+-. .||.... +.......|.|||++++.+.+++.
T Consensus 57 ~~GP~Ira~~GD~i~V~f~N~~~~--~~--siH~HG~~~~~~~~~~~~~d~~~~~~~~~~~V~PGet~tY~w~v~~~~gp 132 (180)
T d1sdda1 57 LLGPTLYAEVGDIMKVHFKNKAHK--PL--SIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGP 132 (180)
T ss_dssp SCCCCEEEETTCEEEEEEEECSSS--CB--CCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSC
T ss_pred CcCCeEEEECCcEEeeEEEeCCCC--Cc--cccccccccccccccccccccCCCCCccccccCCCCEEEEEEEeCCcccC
Confidence 678999999999999999999865 33 47777776543 2443211 111122358999999999998753
Q ss_pred ------CceEEEEEEec-----CCCceeeEEEEEcC
Q psy16562 336 ------NNLYWMQAKTL-----CDSITAEAVLQYEG 360 (445)
Q Consensus 336 ------~G~y~~~~~~~-----~~~~~~~ail~y~~ 360 (445)
.|+||||+|.. ..++.+..||.-.+
T Consensus 133 ~~~d~~~gt~~YHshv~~~~~~~~GL~G~lIV~~~g 168 (180)
T d1sdda1 133 THDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (180)
T ss_dssp CSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred ccCCCCCEEEEEecCCCcHHHhhCCceEEEEEccCC
Confidence 36999999975 36777776554433
|
| >d1gska2 b.6.1.3 (A:183-356) Spore coat protein A, CotA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Spore coat protein A, CotA species: Bacillus subtilis [TaxId: 1423]
Probab=98.19 E-value=6.2e-07 Score=78.18 Aligned_cols=53 Identities=23% Similarity=0.458 Sum_probs=45.5
Q ss_pred eeEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccCC-CeEEeEEEecC
Q psy16562 391 FFKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAVE-PLVVDSVTLFP 445 (445)
Q Consensus 391 ~~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~~-p~~~Dtv~v~p 445 (445)
.++++ +++|||||+|++... .+.|+| +||.|+||+.||.+++ |..+|++.|+|
T Consensus 60 ~~~v~-~~~~RlRliNa~~~~-~~~l~~~~g~~~~vIa~DG~~l~~P~~~~~l~l~p 114 (174)
T d1gska2 60 YLEVE-PRKYRFRVINASNTR-TYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAP 114 (174)
T ss_dssp EEECC-SSEEEEEEEECCSSC-CEEEEETTCCCEEEEEETTEEEEEEEEESEEEECT
T ss_pred EEEec-CceEEEEEEecccCc-eeeEeecCCCcEEEEEECCCcccCceEeCEEEEcC
Confidence 35554 567999999999887 688999 5789999999999985 99999999986
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=98.19 E-value=8.1e-07 Score=70.59 Aligned_cols=87 Identities=15% Similarity=0.242 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCC--cccccCCCCCCceEEEEecC-CCcceEEeccc
Q psy16562 107 LPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVP--MVTQCPIPSSTTFRYKFPAM-PSGTFFYHSHV 183 (445)
Q Consensus 107 ~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp--~~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H~ 183 (445)
|--..|+|+.||+|+ +.|... .+++++......... ...+.. ....-.+.||+++.+.|.+. ++|+|||+|..
T Consensus 16 F~P~~l~v~~GdtV~--f~n~~~-~~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T d2q5ba1 16 FEPANVTVHPGDTVK--WVNNKL-PPHNILFDDKQVPGA-SKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp EESSEEEECTTEEEE--EEECSS-CCEEEEECGGGSGGG-CHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECST
T ss_pred EeCCEEEECCCCEEE--EEECCC-CCceeEeecCccccc-ccccCCccccccccccCCceEEEEEEeccCCceEEEEeCC
Confidence 334689999999865 667654 455655554332110 000000 01233578999999999876 78999999974
Q ss_pred chhhhcCceeEEEEeC
Q psy16562 184 GLQKMDGLEGSMIIRT 199 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~~ 199 (445)
|...||.|.|+|+.
T Consensus 92 --H~~~GM~G~I~Veg 105 (105)
T d2q5ba1 92 --HRGAGMVGKITVEG 105 (105)
T ss_dssp --TGGGTCEEEEEECC
T ss_pred --CCCCCCEEEEEEcC
Confidence 88889999999973
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=98.19 E-value=1.3e-06 Score=68.57 Aligned_cols=81 Identities=11% Similarity=0.119 Sum_probs=49.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCC--CCCCCcccccCCCCCCceEEEEecCCCcceEEecccchh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPW--MDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQ 186 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~--~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q 186 (445)
-.+|++++||+|+ +.|... ..+++.+.......... ..+.. ...-...|+.+|++.| .++|+|||+|-. |
T Consensus 16 P~~i~v~~GdtV~--f~n~~~-~~h~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tf--~~~G~y~y~C~~--H 87 (99)
T d1bypa_ 16 PSDLSIASGEKIT--FKNNAG-FPHNDLFDKKEVPAGVDVTKISMP-EEDLLNAPGEEYSVTL--TEKGTYKFYCAP--H 87 (99)
T ss_dssp SSEEEECTTEEEE--EEECSS-CCBCCEECTTSSCTTCCHHHHSCC-TTCCBCSTTCEEEEEE--CSCEEEEEECGG--G
T ss_pred CCEEEECCCCEEE--EEECCC-CceeEEEecCCCCCccccccCccc-ccccccCCCceEEEEe--cCCceEEEEECc--C
Confidence 3689999999855 667654 44444443322211100 00000 0112345666666655 689999999964 7
Q ss_pred hhcCceeEEEE
Q psy16562 187 KMDGLEGSMII 197 (445)
Q Consensus 187 ~~~Gl~G~lIV 197 (445)
...||.|.|+|
T Consensus 88 ~~~GM~G~I~V 98 (99)
T d1bypa_ 88 AGAGMVGKVTV 98 (99)
T ss_dssp TTTTCEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 88899999998
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=98.18 E-value=1.9e-06 Score=66.75 Aligned_cols=74 Identities=19% Similarity=0.325 Sum_probs=51.7
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-+.|++.+||+|+ +.|... ..+++...+..... +. + -.+.||++++|.| ..+|+|.|+|.. |..
T Consensus 18 P~~i~I~~GdtV~--f~n~d~-~~h~~~~~~~~~~~--~~------~-~~~~~g~~~~~tF--~~~G~y~Y~C~~--H~~ 81 (91)
T d1bxua_ 18 PSTIEIQAGDTVQ--WVNNKL-APHNVVVEGQPELS--HK------D-LAFSPGETFEATF--SEPGTYTYYCEP--HRG 81 (91)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCEEEEETTCGGGC--EE------E-EECSTTCEEEEEC--CSCEEEEEECTT--TGG
T ss_pred CCEEEECCCCEEE--EEECCc-CCceEEeccccccc--cc------c-cccCCCCCEEEEe--ccCceEEEEeCC--CCC
Confidence 4799999999765 678765 44454444332110 11 1 1467899877766 579999999964 777
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 82 ~gM~G~I~Ve 91 (91)
T d1bxua_ 82 AGMVGKIVVQ 91 (91)
T ss_dssp GTCEEEEEEC
T ss_pred CCCEEEEEEC
Confidence 8999999995
|
| >d1kv7a2 b.6.1.3 (A:171-335) multi-copper oxidase CueO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: multi-copper oxidase CueO species: Escherichia coli [TaxId: 562]
Probab=98.15 E-value=6.9e-07 Score=77.18 Aligned_cols=52 Identities=27% Similarity=0.427 Sum_probs=44.9
Q ss_pred eEeeCCcEEEEEEEcCCCCccceEEEE-eCeeEEEEecCCccC-CCeEEeEEEecC
Q psy16562 392 FKVQRDKRYLMRIIGGSCLACPLIFTI-EKHQLQVIASDGTAV-EPLVVDSVTLFP 445 (445)
Q Consensus 392 ~~v~~G~~~~~rliN~s~~~Hp~~~hi-hgh~f~Vi~~dG~~~-~p~~~Dtv~v~p 445 (445)
+.+ +|+++||||+|++... .+.|++ +||.|+||+.||.++ +|...+++.|+|
T Consensus 54 ~~~-~~~~~RlR~iNa~~~~-~~~~~~~~g~~~~via~DG~~~~~P~~~~~l~l~p 107 (165)
T d1kv7a2 54 HAA-PRGWLRLRLLNGCNAR-SLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 107 (165)
T ss_dssp EEE-EEEEEEEEEEECCSSC-CEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred Eec-cCcEEEEEEEEcccCc-eeeEEecCCCeEEEEEeCCccccCceEeCeEEECC
Confidence 444 4779999999998887 577887 799999999999999 599999999986
|
| >d2j5wa1 b.6.1.3 (A:1-192) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=8.2e-07 Score=78.61 Aligned_cols=91 Identities=7% Similarity=0.146 Sum_probs=64.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcce----eeEecEEEecCCceEEEEEecCCC---
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVE----PLVVDSVTLFPGDRVDVIIHTNQS--- 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~----P~~~~~~~I~pGeR~dv~v~~~~~--- 335 (445)
.++|+|+++.|++++++|.|.+.. ++. ||.|++.... .||.... ........+.||+.+++.+.+++.
T Consensus 73 ~lGP~Ira~~GD~v~V~~~N~~~~--p~s--iH~HG~~~~~~~~g~~~~dg~~~~~~~~~~v~PG~t~tY~~~~~~~~~p 148 (192)
T d2j5wa1 73 FLGPIIKAETGDKVYVHLKNLASR--PYT--FHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSP 148 (192)
T ss_dssp TSCCCEEEETTCEEEEEEEEESSS--CBC--CEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSC
T ss_pred CcCCeEEEECCcEEEEEEEeCCCC--Ccc--eeccCcccCCcccccccCCCCCCCCcccCcccCCCEEEEEEEccCcccc
Confidence 678999999999999999999875 344 5566665532 3443321 122345579999999999998763
Q ss_pred ------CceEEEEEEec-----CCCceeeEEEEE
Q psy16562 336 ------NNLYWMQAKTL-----CDSITAEAVLQY 358 (445)
Q Consensus 336 ------~G~y~~~~~~~-----~~~~~~~ail~y 358 (445)
+|+||||+|.. ..++.+..||.-
T Consensus 149 ~~~d~~~gt~~YHsHv~~~~~~~~GL~G~lIV~~ 182 (192)
T d2j5wa1 149 GEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICK 182 (192)
T ss_dssp CTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEEC
T ss_pred ccCCCCCceEEEeCCCCcHHHHhCCCeEEEEEcc
Confidence 46999999975 356767655533
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=98.12 E-value=2.5e-06 Score=67.11 Aligned_cols=82 Identities=11% Similarity=0.099 Sum_probs=52.0
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCC-CCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTP-WMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~-~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
-.+|++++||+|+ +.|... .++++.+......... ..++.-........||++|++.| .++|+|.|+|- .|.
T Consensus 16 P~~iti~~GdtV~--f~n~~~-~~Hnv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tF--~~~G~y~Y~C~--pH~ 88 (99)
T d1plca_ 16 PSEFSISPGEKIV--FKNNAG-FPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVAL--SNKGEYSFYCS--PHQ 88 (99)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEEC--CSCEEEEEECG--GGT
T ss_pred CCEEEECCCCEEE--EEECCC-CCccEEEccCcCCCccccccCcccccccccCCCceEEEec--CCCceEEEEeC--CCc
Confidence 3689999999865 678654 4556554432221100 00000001122457899877776 58999999994 588
Q ss_pred hcCceeEEEE
Q psy16562 188 MDGLEGSMII 197 (445)
Q Consensus 188 ~~Gl~G~lIV 197 (445)
..||.|.|+|
T Consensus 89 ~~GM~G~I~V 98 (99)
T d1plca_ 89 GAGMVGKVTV 98 (99)
T ss_dssp TTTCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 8999999998
|
| >d2j5wa4 b.6.1.3 (A:706-884) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ceruloplasmin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.11 E-value=1.2e-06 Score=76.16 Aligned_cols=79 Identities=8% Similarity=0.116 Sum_probs=61.2
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEc-cCCCcceeeEecEEEecCCceEEEEEecCCCCc-----
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA-SDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNN----- 337 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via-~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G----- 337 (445)
..+|+|+++.||+++++|.|.+.. ++ +||+|++.+-. .|| .+.|||.+.+.+++++..|
T Consensus 83 ~lGP~IraevGD~i~V~f~N~a~~--p~--SiH~HGv~~~~~~~~-----------~v~PGet~tY~w~v~~~~gp~~~d 147 (179)
T d2j5wa4 83 ILGPQLHADVGDKVKIIFKNMATR--PY--SIHAHGVQTESSTVT-----------PTLPGETLTYVWKIPERSGAGTED 147 (179)
T ss_dssp TSCCCEEEETTEEEEEEEEECSSS--CB--CCEESSCBCSCSCCC-----------CBCTTCEEEEEEECCGGGSCCTTS
T ss_pred ccCCeEEEECCCEEEEEEEeCCCC--CE--eEeeccccCCCCCCC-----------cccCCccEEEEEEecCccCCccCC
Confidence 568999999999999999999865 33 57888876532 244 3789999999999876444
Q ss_pred ----eEEEEEEec-----CCCceeeEEEE
Q psy16562 338 ----LYWMQAKTL-----CDSITAEAVLQ 357 (445)
Q Consensus 338 ----~y~~~~~~~-----~~~~~~~ail~ 357 (445)
+||||+|.. ..++.+..||.
T Consensus 148 ~~c~t~~YHShv~~~~d~~sGL~GplIVc 176 (179)
T d2j5wa4 148 SACIPWAYYSTVDQVKDLYSGLIGPLIVC 176 (179)
T ss_dssp CSEEEEEEECCTTHHHHHHTTCEEEEEEE
T ss_pred CCceeEEEecCCCcHHHhhCCCeEEEEEE
Confidence 899999986 36677776653
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=98.11 E-value=6.7e-06 Score=65.29 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=54.7
Q ss_pred CCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEeccc
Q psy16562 104 NRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHV 183 (445)
Q Consensus 104 Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~ 183 (445)
+-+|--++|.+++||+|. +.|... .++++++... .+|........+.+|++|+|.| .++|+|.|+|-.
T Consensus 27 ~~~F~P~~i~V~~GdtV~--f~N~d~-~~H~v~~~~~-------~~~~~~~~~~~~~~g~~~~~tf--~~pG~y~y~C~~ 94 (105)
T d2ov0a1 27 KMKYETPELHVKVGDTVT--WINREA-MPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF--TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEE--EEECSS-SCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE--CSCEEEEEECSS
T ss_pred cCEEeCCEEEECCCCEEE--EEECCC-CceeEEEecc-------cCCcccccccccCCCceEEEEe--cCCeEEEEEecC
Confidence 335666799999999875 678754 5666554422 1222223344578999988888 479999999943
Q ss_pred chhhhcCceeEEEEe
Q psy16562 184 GLQKMDGLEGSMIIR 198 (445)
Q Consensus 184 ~~q~~~Gl~G~lIV~ 198 (445)
. .||.|.|+|+
T Consensus 95 H----~~M~G~I~Ve 105 (105)
T d2ov0a1 95 H----PFMRGKVVVE 105 (105)
T ss_dssp C----TTCEEEEEEC
T ss_pred C----CCCEEEEEEC
Confidence 1 3899999985
|
| >d1v10a3 b.6.1.3 (A:305-494) Laccase {Rigidoporus lignosus [TaxId: 219653]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Rigidoporus lignosus [TaxId: 219653]
Probab=98.05 E-value=3e-05 Score=68.10 Aligned_cols=76 Identities=20% Similarity=0.344 Sum_probs=63.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc----eeeEecEEEecCC-ceEEEEEecCCCCceEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFPG-DRVDVIIHTNQSNNLYW 340 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I~pG-eR~dv~v~~~~~~G~y~ 340 (445)
...+.+..++.+++++.|... +-+|+|||.|.|++.+|... .|...|++.|.+| +++.+.+.++. +|.|.
T Consensus 71 ~~~~~~~~~~~~~i~~~~~~~----HP~HlHG~~F~Vl~~~~~~~~~~~~~~~rDTv~v~~~g~~~~irf~adn-pG~w~ 145 (190)
T d1v10a3 71 GAVISLPANQVIEISIPGGGN----HPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDN-PGPWF 145 (190)
T ss_dssp TTEEEECTTCEEEEEEECCBS----CEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCS-CEEEE
T ss_pred ceeEEccCccEEEEEeccCcc----ccccccCceEEEEEcCCCcccccccCcccCEEEeCCCeEEEEEEEEcCC-CeeEE
Confidence 457889999999999888653 34669999999999987654 3668899999885 67888899987 79999
Q ss_pred EEEEec
Q psy16562 341 MQAKTL 346 (445)
Q Consensus 341 ~~~~~~ 346 (445)
+|||..
T Consensus 146 ~HCHi~ 151 (190)
T d1v10a3 146 LHCHID 151 (190)
T ss_dssp EEESCH
T ss_pred EecCch
Confidence 999987
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=98.04 E-value=4.7e-06 Score=75.01 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=61.3
Q ss_pred eEEEEcCCEEEEEEEecCCC----CCceEeeCCcccCCCCCCCCCCcc-------------------------cccCCCC
Q psy16562 111 SIQVCKGDTIIVDVKNHMID----REVTLHWHGVYQKVTPWMDGVPMV-------------------------TQCPIPS 161 (445)
Q Consensus 111 tI~v~~GD~v~V~v~N~l~~----~~tsiHwHG~~~~~~~~~DGvp~~-------------------------tq~pI~p 161 (445)
.+++...+..++.+.+.... .++.+|+||.....-....|.... | -.++|
T Consensus 62 ~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDT-v~v~~ 140 (216)
T d2q9oa3 62 IVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDT-TMLPA 140 (216)
T ss_dssp EEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESE-EEECT
T ss_pred eeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceece-EEeCC
Confidence 56777777666665544321 469999999974321111111100 1 13779
Q ss_pred CCceEEEEecCCCcceEEecccchhhhcCceeEEEEeC
Q psy16562 162 STTFRYKFPAMPSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 162 G~~~~Y~f~~~~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
|+..+.+|.++.+|.|.+|||...|...||+..++.++
T Consensus 141 ~g~~~ir~~adnpG~Wl~HCHi~~H~~~GM~~~~~~~p 178 (216)
T d2q9oa3 141 GGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERP 178 (216)
T ss_dssp TSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEECCCCeEEEEEccCCcccccCCeEEEEEcc
Confidence 99999999999999999999999999999987775543
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=98.01 E-value=4.7e-06 Score=65.08 Aligned_cols=77 Identities=17% Similarity=0.358 Sum_probs=44.0
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccc--cCCCCCCceEEEEecCCCcceEEecccchhh
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQ--CPIPSSTTFRYKFPAMPSGTFFYHSHVGLQK 187 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq--~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~ 187 (445)
.+|++++||+|+.. |.... .....+ ... +...+.+.... -...++.+ |+|+...+|+|.|+|-. |.
T Consensus 19 ~~i~V~~GdtV~f~--~~~~~-~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~--~~~tf~~~G~y~Y~C~~--H~ 86 (97)
T d2jxma1 19 KALSISAGDTVEFV--MNKVG-PHNVIF----DKV-PAGESAPALSNTKLAIAPGSF--YSVTLGTPGTYSFYCTP--HR 86 (97)
T ss_dssp SEEEECTTCEEEEE--ECSSC-CCCBEE----EEC-CTTSCHHHHCBCCCCCSCSCC--EEEECCSCSEEEEECSS--TT
T ss_pred CEEEECCCCEEEEE--ECCCc-ceeEEE----ecC-CCccccccccccccccCcceE--EEEecCCCeEEEEEEcc--CC
Confidence 58999999988754 44331 111111 110 01111111111 12345555 45555689999999953 77
Q ss_pred hcCceeEEEEe
Q psy16562 188 MDGLEGSMIIR 198 (445)
Q Consensus 188 ~~Gl~G~lIV~ 198 (445)
..||.|.|+|+
T Consensus 87 ~~GM~G~I~Ve 97 (97)
T d2jxma1 87 GAGMVGTITVE 97 (97)
T ss_dssp TTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 78999999995
|
| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.99 E-value=3.2e-05 Score=63.80 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=50.7
Q ss_pred cccceEEEecCcEEEEEEEccCCCc-eeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLA-CPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~-~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
++.+.|+|+.|++|+|+|.|..... ..+.+.|...++ ...+.||+...+.|++++ +|+|+|+
T Consensus 49 f~p~~i~V~~Gd~V~~~ltN~d~~~~v~H~~~i~~~~~----------------~~~~~PG~~~~~~F~a~~-~G~y~~~ 111 (132)
T d1fwxa1 49 FSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------------AMEIGPQMTSSVTFVAAN-PGVYWYY 111 (132)
T ss_dssp ESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS-CEEEEEE
T ss_pred ccCCEEEEcCCCEEEEEEEcCCCCccceEeechhhhcc----------------ccccCCCEEEEEEEeCCC-CeEEEEE
Confidence 5567999999999999999987432 123344433322 235789999999999997 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|+..|
T Consensus 112 C~~~c 116 (132)
T d1fwxa1 112 CQWFC 116 (132)
T ss_dssp CCSCC
T ss_pred Ccccc
Confidence 98665
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=97.95 E-value=7.4e-06 Score=64.02 Aligned_cols=82 Identities=12% Similarity=0.084 Sum_probs=49.2
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-.+|++++||+|+ +.|... .++++....-........++... ..-...+++++++.| ..+|+|+|+|- .|..
T Consensus 17 P~~i~i~~GdtV~--f~n~~~-~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f--~~~G~y~y~C~--~H~~ 88 (98)
T d1iuza_ 17 PSKISVAAGEAIE--FVNNAG-FPHNIVFDEDAVPAGVDADAISY-DDYLNSKGETVVRKL--STPGVYGVYCE--PHAG 88 (98)
T ss_dssp SSEEEECTTCEEE--EEECSS-CCEEEEECTTSSCTTCCHHHHCE-EEEECSTTCEEEEEC--CSCEEEEEECT--TTGG
T ss_pred CCEEEECCCCEEE--EEECCC-CcccEEEeCCCcccccccccccc-cCcccCCCcEEEEec--CCCceEEEEeC--CCcc
Confidence 3589999999865 566644 34443333221111000000001 112356677665554 58999999996 4888
Q ss_pred cCceeEEEEe
Q psy16562 189 DGLEGSMIIR 198 (445)
Q Consensus 189 ~Gl~G~lIV~ 198 (445)
.||.|.|+|+
T Consensus 89 ~GM~G~I~Ve 98 (98)
T d1iuza_ 89 AGMKMTITVQ 98 (98)
T ss_dssp GTCEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 8999999995
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=97.93 E-value=7.9e-06 Score=66.80 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=49.3
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-++|++.+||+|+ +.|... ..++.-..+. ..++... ....+|++++|.| ..+|+|.|+|.. |..
T Consensus 20 P~~ltV~~GDTV~--f~n~d~-~~h~~~~~~~------~~~~~~~---~~~~~~~~~~~tF--~~~G~Y~Y~C~p--H~~ 83 (123)
T d1pmya_ 20 PALVRLKPGDSIK--FLPTDK-GHNVETIKGM------APDGADY---VKTTVGQEAVVKF--DKEGVYGFKCAP--HYM 83 (123)
T ss_dssp SSEEEECTTCEEE--EECSSS-SCCCEECTTS------SCTTCCC---CBCCTTSCEEEEC--CSCEEEEEECST--TTT
T ss_pred CCEEEECCCCEEE--EeeCCC-Cccccccccc------Ccccccc---ccccccccccccc--CCCceEEEEecc--CCC
Confidence 3899999999976 555533 1222111111 2222221 2345666666555 679999999965 888
Q ss_pred cCceeEEEEeCCC
Q psy16562 189 DGLEGSMIIRTPK 201 (445)
Q Consensus 189 ~Gl~G~lIV~~~~ 201 (445)
.||.|.|+|.++.
T Consensus 84 ~GM~G~I~Vgd~~ 96 (123)
T d1pmya_ 84 MGMVALVVVGDKR 96 (123)
T ss_dssp TTCEEEEEESSCC
T ss_pred CCCEEEEEECCCC
Confidence 9999999997653
|
| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Alcaligenes faecalis, strain s-6 [TaxId: 511]
Probab=97.93 E-value=2.2e-05 Score=63.68 Aligned_cols=76 Identities=9% Similarity=0.058 Sum_probs=48.9
Q ss_pred CCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhh
Q psy16562 109 GPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKM 188 (445)
Q Consensus 109 GPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~ 188 (445)
-..|++++||+|. +.|... +++++.-.- .+.+|... ....+++++++.| +.+|+|.|+|.. |..
T Consensus 20 P~~itI~~GDTV~--f~n~~~--~Hnv~~~~~-----~~~~~~~~---~~~~~~~~~s~tF--~~~G~y~Y~Ctp--H~~ 83 (120)
T d1paza_ 20 PAYIKANPGDTVT--FIPVDK--GHNVESIKD-----MIPEGAEK---FKSKINENYVLTV--TQPGAYLVKCTP--HYA 83 (120)
T ss_dssp SSEEEECTTCEEE--EEESSS--SCCCEECTT-----CSCTTCCC---CBCCTTCCEEEEC--CSCEEEEEECTT--TGG
T ss_pred CCEEEECCCCEEE--EeeCCC--cceEeeccc-----cCcccccc---cccccCceEEEEe--cCCCeEEEEEee--CCC
Confidence 3789999999985 556533 333333221 12222221 1234566655555 689999999964 788
Q ss_pred cCceeEEEEeCC
Q psy16562 189 DGLEGSMIIRTP 200 (445)
Q Consensus 189 ~Gl~G~lIV~~~ 200 (445)
.||.|.|+|.++
T Consensus 84 ~GM~G~I~Vg~~ 95 (120)
T d1paza_ 84 MGMIALIAVGDS 95 (120)
T ss_dssp GTCEEEEEESSS
T ss_pred CCCEEEEEECCC
Confidence 899999999875
|
| >d1aoza3 b.6.1.3 (A:339-552) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Ascorbate oxidase species: Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
Probab=97.90 E-value=1.8e-05 Score=70.84 Aligned_cols=78 Identities=8% Similarity=0.186 Sum_probs=65.2
Q ss_pred eEEEecCcEEEEEEEccCCC----ceeEEEEecccceEEEccCCCcc-----------eeeEecEEEecCCceEEEEEec
Q psy16562 268 FFKVQRDKRYLMRIIGGSCL----ACPLIFTIEKHQLQVIASDGTAV-----------EPLVVDSVTLFPGDRVDVIIHT 332 (445)
Q Consensus 268 ~i~v~~G~~~rlRliN~~~~----~~~~~~~i~gh~~~via~DG~~v-----------~P~~~~~~~I~pGeR~dv~v~~ 332 (445)
.+.++.|+.++|.|.|.+.. ...+-+|+|||.|.|++.++... .|...|++.+.+|+...+.|.+
T Consensus 80 v~~~~~g~~veivl~n~~~~~~~~~~~HP~HlHG~~F~vl~~~~g~~~~~~~~~~n~~~p~~rDTv~v~~g~~~~ir~~a 159 (214)
T d1aoza3 80 VYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVA 159 (214)
T ss_dssp CEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEEC
T ss_pred eEEecCCCEEEEEEeccccccCCCCCCcceEeecceeEEeccCCCcccccccccccccCCceecCcccCCCceEEEEEec
Confidence 68999999999999997531 12467889999999998754321 3677899999999999999999
Q ss_pred CCCCceEEEEEEec
Q psy16562 333 NQSNNLYWMQAKTL 346 (445)
Q Consensus 333 ~~~~G~y~~~~~~~ 346 (445)
+. +|.|.+|||..
T Consensus 160 dn-pG~w~~HCH~~ 172 (214)
T d1aoza3 160 DN-PGVWAFHCHIE 172 (214)
T ss_dssp CS-CEEEEEEESSH
T ss_pred CC-CeeEEEEECcH
Confidence 87 89999999987
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=97.85 E-value=2.8e-05 Score=63.39 Aligned_cols=75 Identities=8% Similarity=-0.041 Sum_probs=48.4
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|++++||+|+. .|... ..+..-.++ ....+.. .....++.+|+|.| ..+|+|.|+|-. |...
T Consensus 21 ~~itI~~GdtV~f--~n~~~-~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~tF--~~~G~Y~Y~C~p--H~~~ 84 (123)
T d1adwa_ 21 AFVRAEPGDVINF--VPTDK-SHNVEAIKE-----ILPEGVE----SFKSKINESYTLTV--TEPGLYGVKCTP--HFGM 84 (123)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----SCCTTCC----CCBCCTTCCEEEEE--CSCEEEEEECGG--GGGG
T ss_pred CEEEECCCCEEEE--EeCCC-CcceecccC-----ccccccc----cccccCCcceEEec--cCCCeEEEEEcc--CCCC
Confidence 6999999998775 55543 222211121 1111111 12456677766666 579999999964 7888
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.++
T Consensus 85 GM~G~I~Vg~~ 95 (123)
T d1adwa_ 85 GMVGLVQVGDA 95 (123)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999765
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=97.84 E-value=3.4e-05 Score=62.90 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=48.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecccchhhhc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSHVGLQKMD 189 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H~~~q~~~ 189 (445)
..|++.+||+|. +.|... ....|..... ..+|... ....++++|+|.| +.+|+|.|+|. .|...
T Consensus 21 ~~itI~~GdTV~--w~n~~~--~~~~~~~~~~-----~p~~~~~---~~~~~~~~~s~Tf--~~~G~Y~Y~C~--pH~~~ 84 (124)
T d1bqka_ 21 ASLKVAPGDTVT--FIPTDK--GHNVETIKGM-----IPDGAEA---FKSKINENYKVTF--TAPGVYGVKCT--PHYGM 84 (124)
T ss_dssp SEEEECTTCEEE--EECSSS--SCCCEECTTC-----SCTTCCC---CBCCTTCCEEEEC--CSCEEEEEECT--TTGGG
T ss_pred CEEEECCCCeEE--EEECCC--Cccccccccc-----CCCcccc---ccccCCccEEEec--CCCceEEEEec--cCcCC
Confidence 689999999864 666543 2222221111 1122211 2355677666655 68999999996 47788
Q ss_pred CceeEEEEeCC
Q psy16562 190 GLEGSMIIRTP 200 (445)
Q Consensus 190 Gl~G~lIV~~~ 200 (445)
||.|.|+|.++
T Consensus 85 GM~G~IvVgd~ 95 (124)
T d1bqka_ 85 GMVGVVQVGDA 95 (124)
T ss_dssp TCEEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 99999999764
|
| >d1gyca3 b.6.1.3 (A:301-499) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Trametes versicolor, laccase 2 [TaxId: 5325]
Probab=97.82 E-value=9.6e-05 Score=65.26 Aligned_cols=80 Identities=16% Similarity=0.340 Sum_probs=63.7
Q ss_pred cceEEEecCcEEEEEEEccCCC-ceeEEEEecccceEEEccCCCcc----eeeEecEEEe---cCCceEEEEEecCCCCc
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCL-ACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTL---FPGDRVDVIIHTNQSNN 337 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~-~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I---~pGeR~dv~v~~~~~~G 337 (445)
...+.+..++++++.++|.... ...+-||+|||.|.|++.+|... .|...+++.+ .+|+.+.+.+.++. ||
T Consensus 69 ~~v~~~~~~~~~eiv~~~~~~~~~~~HP~HlHG~~F~vv~~~~~~~~~~~~p~~rdt~~~~~~~~g~~~~irf~adn-pG 147 (199)
T d1gyca3 69 GSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFAVVRSAGSTTYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDN-PG 147 (199)
T ss_dssp TSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECCS-CE
T ss_pred CceEEeccCceeEEEeecccccCCCceeeeecCCcEEEEeecCCCccCccCcccccceeeeccCCCcEEEEEEECCC-Ce
Confidence 5578899999999988876532 22467889999999998876542 3666676655 79999999999987 89
Q ss_pred eEEEEEEec
Q psy16562 338 LYWMQAKTL 346 (445)
Q Consensus 338 ~y~~~~~~~ 346 (445)
.|.+|||..
T Consensus 148 ~w~~HCHi~ 156 (199)
T d1gyca3 148 PWFLHCHID 156 (199)
T ss_dssp EEEEEESSH
T ss_pred eEEEEcCch
Confidence 999999987
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=97.79 E-value=9.4e-06 Score=64.15 Aligned_cols=79 Identities=15% Similarity=0.284 Sum_probs=53.1
Q ss_pred CeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCc------ccccCCCCCCceEEEEecC-CCcceEEecc
Q psy16562 110 PSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPM------VTQCPIPSSTTFRYKFPAM-PSGTFFYHSH 182 (445)
Q Consensus 110 PtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~------~tq~pI~pG~~~~Y~f~~~-~~GT~wYH~H 182 (445)
.+|++++||+|+ +.|... ..++........ .++... ...-...|++++++.|.+. ++|+|||+|-
T Consensus 19 ~~i~v~~GdtV~--f~n~~~-~~h~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T d2cj3a1 19 AKLTIKPGDTVE--FLNNKV-PPHNVVFDAALN-----PAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 90 (105)
T ss_dssp SEEEECTTCEEE--EEECSS-CCEEEEECSSSS-----TTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CEEEECCCCEEE--EEECCC-CceeeEeccCCC-----CccccccCCcccccccccCCCcceEEEEEeccCCceEEEEeC
Confidence 589999999865 667654 333333322111 111100 1122467999999999875 7999999996
Q ss_pred cchhhhcCceeEEEEe
Q psy16562 183 VGLQKMDGLEGSMIIR 198 (445)
Q Consensus 183 ~~~q~~~Gl~G~lIV~ 198 (445)
. |...||.|.|+|+
T Consensus 91 ~--H~~~GM~G~I~V~ 104 (105)
T d2cj3a1 91 P--HRGAGMVGKITVA 104 (105)
T ss_dssp T--TGGGTCEEEEEEC
T ss_pred C--CcCCCcEEEEEEe
Confidence 4 8889999999996
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=97.61 E-value=8.6e-05 Score=58.67 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=51.6
Q ss_pred ECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCCcceEEecc
Q psy16562 103 INRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPSGTFFYHSH 182 (445)
Q Consensus 103 ~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~GT~wYH~H 182 (445)
-+-.|=-+.|.+++||+| ++.|... .++++........ .++ ...-.+.+|++|+|.| +++|+|.|+|-
T Consensus 27 ~~~~F~P~~i~V~~GdtV--~f~N~d~-~~H~v~~~~~~~~----~~~---f~s~~~~~~~~~~~tf--~~~G~y~y~C~ 94 (106)
T d1id2a_ 27 EKMKYLTPEVTIKAGETV--YWVNGEV-MPHNVAFKKGIVG----EDA---FRGEMMTKDQAYAITF--NEAGSYDYFCT 94 (106)
T ss_dssp ETTEESSSEEEECTTCEE--EEEECSS-SCBCCEECTTTSS----SSC---EECCCBCTTEEEEEEE--CSCEEEEEECS
T ss_pred ccCEEeCCEEEECCCCEE--EEEECCC-CceeEEeccccCC----ccc---ccccccCCCceEEEec--CCCeEEEEEcc
Confidence 344565579999999986 4678754 4544433221111 111 1112467888888777 58999999995
Q ss_pred cchhhhcCceeEEEEe
Q psy16562 183 VGLQKMDGLEGSMIIR 198 (445)
Q Consensus 183 ~~~q~~~Gl~G~lIV~ 198 (445)
. | .||.|.|+|+
T Consensus 95 ~--H--~~M~G~I~Ve 106 (106)
T d1id2a_ 95 P--H--PFMRGKVIVE 106 (106)
T ss_dssp S--C--TTCEEEEEEC
T ss_pred C--C--CCCEEEEEEC
Confidence 4 2 3899999985
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=97.53 E-value=0.00013 Score=59.83 Aligned_cols=89 Identities=10% Similarity=-0.005 Sum_probs=59.5
Q ss_pred CCCCeEEE-EcCCEEEEEEEecCCCCCceEeeCCccc--------------------CCC-CCCCCCCcccccCCCCCCc
Q psy16562 107 LPGPSIQV-CKGDTIIVDVKNHMIDREVTLHWHGVYQ--------------------KVT-PWMDGVPMVTQCPIPSSTT 164 (445)
Q Consensus 107 ~PGPtI~v-~~GD~v~V~v~N~l~~~~tsiHwHG~~~--------------------~~~-~~~DGvp~~tq~pI~pG~~ 164 (445)
|---+|.| +.|++|+|.|.|... .+..+=.|.+.. ..- +..+.+-. .---|.||++
T Consensus 15 f~~~~i~V~k~G~~V~l~~~N~g~-l~h~~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via-~t~~l~pget 92 (129)
T d2ccwa1 15 YNVKEIVVDKSCKQFTMHLKHVGK-MAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIA-HTKVIGGGES 92 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSC-CCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEE-ECCCBCTTCE
T ss_pred CccceEEEecCCCEEEEEEEcCCc-CchheeeccccccCcccHHHHHHHHHHhhhccccCCCccccccc-cccccCCCce
Confidence 44568998 689999999999864 332222232211 000 01111111 1124889999
Q ss_pred eEEEEecC---CCcceEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.+..|+++ ++|+|+|-|-...|. .||.|.|.|.
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~ 128 (129)
T d2ccwa1 93 DSVTFDVSKIAAGENYAYFCSFPGHW-AMMKGTLKLG 128 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEEecccCCCccEEEEeCCCChh-hCcEEEEEEc
Confidence 99999996 799999999887774 6999999984
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=97.53 E-value=0.00013 Score=59.74 Aligned_cols=91 Identities=15% Similarity=0.054 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcC-CEEEEEEEecCCCCCceEeeCCccc--CC-------------------CCCCCCCCcccccCCCCCC
Q psy16562 106 QLPGPSIQVCKG-DTIIVDVKNHMIDREVTLHWHGVYQ--KV-------------------TPWMDGVPMVTQCPIPSST 163 (445)
Q Consensus 106 ~~PGPtI~v~~G-D~v~V~v~N~l~~~~tsiHwHG~~~--~~-------------------~~~~DGvp~~tq~pI~pG~ 163 (445)
+|=-..|.|+.| ++|+|+|.|... .+.++=-|-+.. .+ .|.++.+-. ..-.|.||+
T Consensus 14 ~fd~~~i~V~aG~e~v~i~~~N~g~-lph~~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via-~t~~l~pGe 91 (129)
T d1cuoa_ 14 TYSTRSISVPASCAEFTVNFEHKGH-MPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIA-FTPIIGGGE 91 (129)
T ss_dssp CCSCSEEEEETTCSEEEEEEEECSS-SCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSE-ECCCBCTTC
T ss_pred cCcccEEEEeCCCEEEEEEEEeCCc-CCceeEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhh-hccccCccc
Confidence 354468999999 799999999875 443222222210 00 011111111 123589999
Q ss_pred ceEEEEecC---CCcceEEecccchhhhcCceeEEEEeC
Q psy16562 164 TFRYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIRT 199 (445)
Q Consensus 164 ~~~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~~ 199 (445)
+.+..|+++ ++|+|.|-|-...|. .||.|-|+|++
T Consensus 92 ~~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~V~~ 129 (129)
T d1cuoa_ 92 KTSVKFKVSALSKDEAYTYFCSYPGHF-SMMRGTLKLEE 129 (129)
T ss_dssp EEEEEEEGGGCCTTSCEEEECCSTTCT-TTSEEEEEEEC
T ss_pred cceEEEEccccCCCceEEEEeCCCCcc-cCcEEEEEEeC
Confidence 999999985 599999999876665 69999999974
|
| >d2q9oa3 b.6.1.3 (A:344-559) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Laccase species: Melanocarpus albomyces [TaxId: 204285]
Probab=97.50 E-value=0.00042 Score=61.74 Aligned_cols=80 Identities=13% Similarity=0.189 Sum_probs=60.0
Q ss_pred cceEEEecCcEEEEEEEccCCC---ceeEEEEecccceEEEccCCC---------------------cceeeEecEEEec
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCL---ACPLIFTIEKHQLQVIASDGT---------------------AVEPLVVDSVTLF 321 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~---~~~~~~~i~gh~~~via~DG~---------------------~v~P~~~~~~~I~ 321 (445)
...+.+...+..++.+++.... ...+-+|+|||.|.|++..+. ...|...|++.+.
T Consensus 60 ~~~~~~~~~~~~~~~~i~~~~~n~~~~~HP~HlHG~~F~Vlg~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~~rDTv~v~ 139 (216)
T d2q9oa3 60 DNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLP 139 (216)
T ss_dssp GCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEEC
T ss_pred cceeeccccccceeEEEEeccCCccccccceeecCceEEEEeecCCCCCcccccccccccccccccccCCCceeceEEeC
Confidence 3456677666666666544321 124678899999999986332 1237788999999
Q ss_pred CCceEEEEEecCCCCceEEEEEEec
Q psy16562 322 PGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 322 pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
||+...+.+.++. ||.|.+|||..
T Consensus 140 ~~g~~~ir~~adn-pG~Wl~HCHi~ 163 (216)
T d2q9oa3 140 AGGWLLLAFRTDN-PGAWLFHCHIA 163 (216)
T ss_dssp TTSEEEEEEECCS-CEEEEEEECCH
T ss_pred CCCEEEEEEECCC-CeEEEEEccCC
Confidence 9999999999986 89999999988
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.46 E-value=0.00013 Score=59.77 Aligned_cols=89 Identities=12% Similarity=0.076 Sum_probs=61.6
Q ss_pred CCCCeEEEE-cCCEEEEEEEecCCCCCceEeeCCcc--c-------------------CCCCCCCCCCcccccCCCCCCc
Q psy16562 107 LPGPSIQVC-KGDTIIVDVKNHMIDREVTLHWHGVY--Q-------------------KVTPWMDGVPMVTQCPIPSSTT 164 (445)
Q Consensus 107 ~PGPtI~v~-~GD~v~V~v~N~l~~~~tsiHwHG~~--~-------------------~~~~~~DGvp~~tq~pI~pG~~ 164 (445)
|=-..|.|. .|++|+|.|.|... .++++=.|-.. . .-.|.++.+...| -.|.||++
T Consensus 15 Fd~~~i~V~k~Ge~v~l~~~N~g~-~pH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t-~~l~pGes 92 (128)
T d1jzga_ 15 FNTNAITVDKSCKQFTVNLSHPGN-LPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHT-KLIGSGEK 92 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSS-SCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEEC-CCBCTTCE
T ss_pred CccceEEEecCCCEEEEEEEeCCc-cchheeecCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcc-cccCCCce
Confidence 434689995 79999999999976 44333333210 0 0012233332222 35899999
Q ss_pred eEEEEecC---CCcceEEecccchhhhcCceeEEEEe
Q psy16562 165 FRYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 165 ~~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
.+..|+++ ++|+|-|-|-...|. .||.|.|+|+
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~PGH~-~gM~G~l~Ve 128 (128)
T d1jzga_ 93 DSVTFDVSKLKEGEQYMFFCTFPGHS-ALMKGTLTLK 128 (128)
T ss_dssp EEEEEEGGGCCTTCCEEEECCSTTGG-GTSEEEEEEC
T ss_pred EEEEEEeeccCCCceEEEEECCCCcc-cccEEEEEEC
Confidence 99999986 799999999876676 6999999995
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=97.45 E-value=0.00028 Score=57.07 Aligned_cols=88 Identities=11% Similarity=0.249 Sum_probs=62.3
Q ss_pred CeEEEEEEECCCCCCCeEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcccccCCCCCCceEEEEecCCC
Q psy16562 95 GFERAILSINRQLPGPSIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMVTQCPIPSSTTFRYKFPAMPS 174 (445)
Q Consensus 95 G~~~~~~~~Ng~~PGPtI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~tq~pI~pG~~~~Y~f~~~~~ 174 (445)
+.+..+...+-.|=...|.+..|++|++++.|..- . ||+..+. .. + +--+.||++-...|+++++
T Consensus 32 ~~~v~v~a~~~~f~p~~l~vp~G~~V~~~lts~DV--~-----H~f~ip~---~~----v-~~d~~PG~~~~~~~~~~~~ 96 (122)
T d2cuaa_ 32 QYTVYVLAFAFGYQPNPIEVPQGAEIVFKITSPDV--I-----HGFHVEG---TN----I-NVEVLPGEVSTVRYTFKRP 96 (122)
T ss_dssp EEEEEEEEETTEEESSSEEEETTSEEEEEEEBSSS--C-----EEEEETT---SS----C-EEEECBTBCEEEEEECCSC
T ss_pred eEEEEEEEEeccccCCEEEEeCCCEEEEEEEcCCc--c-----ceeEecC---CC----e-eEEEecCceEEEEEEeccc
Confidence 34445554444443458999999999999999742 2 5655432 11 1 1136799999999999999
Q ss_pred cceEEeccc--c-hhhhcCceeEEEEeC
Q psy16562 175 GTFFYHSHV--G-LQKMDGLEGSMIIRT 199 (445)
Q Consensus 175 GT~wYH~H~--~-~q~~~Gl~G~lIV~~ 199 (445)
|+|.|.|+. | .| .+|.|-|+|++
T Consensus 97 G~y~~~C~~~CG~~H--~~M~g~i~V~e 122 (122)
T d2cuaa_ 97 GEYRIICNQYCGLGH--QNMFGTIVVKE 122 (122)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEEC
T ss_pred eeEEEEehhccCCCc--ccCeEEEEEEC
Confidence 999999984 2 33 37999999974
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=97.42 E-value=0.00022 Score=58.27 Aligned_cols=90 Identities=9% Similarity=0.060 Sum_probs=60.9
Q ss_pred CCCCeEEEE-cCCEEEEEEEecCCCCCceEeeCCcc--------------------cCCCCCCCCCCcccccCCCCCCce
Q psy16562 107 LPGPSIQVC-KGDTIIVDVKNHMIDREVTLHWHGVY--------------------QKVTPWMDGVPMVTQCPIPSSTTF 165 (445)
Q Consensus 107 ~PGPtI~v~-~GD~v~V~v~N~l~~~~tsiHwHG~~--------------------~~~~~~~DGvp~~tq~pI~pG~~~ 165 (445)
|=-.+|.|. .|++|+|+|.|... .++++=.|.+- ....+.+|..-...-..|.||++.
T Consensus 15 fd~~~i~V~~~ge~v~i~~~N~g~-~pH~~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes~ 93 (128)
T d1nwpa_ 15 FNTKDIAIDKSCKTFTVELTHSGS-LPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSS-CCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred CcCCeEEEecCCcEEEEEEEeCCc-cccceeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCce
Confidence 444689996 49999999999865 45444333221 111111221100112358999999
Q ss_pred EEEEecC---CCcceEEecccchhhhcCceeEEEEe
Q psy16562 166 RYKFPAM---PSGTFFYHSHVGLQKMDGLEGSMIIR 198 (445)
Q Consensus 166 ~Y~f~~~---~~GT~wYH~H~~~q~~~Gl~G~lIV~ 198 (445)
+..|+++ ++|+|-|=|-.-.|. .||.|.|+|+
T Consensus 94 ~i~f~~p~~~~~G~Y~f~Ct~PGH~-~~M~G~l~V~ 128 (128)
T d1nwpa_ 94 SVTFDVSKLAAGEKYGFFCSFPGHI-SMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCG-GGSEEEEEEC
T ss_pred EEEEEecccCCCceEEEEECCCCcc-cCceEEEEEC
Confidence 9999996 689999999877776 6999999995
|
| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Nitrosocyanin domain: Nitrous oxide reductase, C-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.41 E-value=0.0005 Score=56.28 Aligned_cols=67 Identities=19% Similarity=0.349 Sum_probs=49.7
Q ss_pred cccceEEEecCcEEEEEEEccCCC-ceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCL-ACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~-~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
+..+.|+|+.|++|+|++.|.... .-.+.|.|.+.++ ...+.||+...+.|++++ +|+|+++
T Consensus 48 f~p~~i~V~~Gd~V~~~vtn~~~s~Dv~H~f~ip~~~v----------------~~~~~PG~t~~~~f~~~~-~G~y~~~ 110 (131)
T d1qnia1 48 YGMTDFKVKEGDEVTVYITNLDMVEDVTHGFCMVNHGV----------------SMEISPQQTASVTFTAGK-PGVYWYY 110 (131)
T ss_dssp ESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS-SEEEEEE
T ss_pred CccceEEecCCCEEEEEEEccCCCCcceEEEEEeccCc----------------ccccCCCceEEEEEEcCC-CEEEEEE
Confidence 334689999999999999997532 1134444443322 244789999999999988 8999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|+..|
T Consensus 111 C~~~c 115 (131)
T d1qnia1 111 CNWFC 115 (131)
T ss_dssp CCSCC
T ss_pred Ccccc
Confidence 97765
|
| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Auracyanin species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.40 E-value=0.00022 Score=58.96 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=52.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEE------EccCCCcc----ee----eEecEEEecCCceEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQV------IASDGTAV----EP----LVVDSVTLFPGDRVDVIIH 331 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~v------ia~DG~~v----~P----~~~~~~~I~pGeR~dv~v~ 331 (445)
...|+|++|++|+|.+.|.+...+++++.+....-.. .+.+|... .| ....+..+.|||++++.|+
T Consensus 31 p~~i~v~aG~~V~~~~~N~~~~~~~Hn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~t~~~~pg~s~~i~f~ 110 (139)
T d1qhqa_ 31 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 110 (139)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEeCCcccceeEEEeecccchhhHHHHHHhhhccchhccccCCCcccccccccccCCcceEEEEEe
Confidence 3589999999999999999864333333322111000 00112111 11 2345677899999999999
Q ss_pred cCCCCceEEEEEEec
Q psy16562 332 TNQSNNLYWMQAKTL 346 (445)
Q Consensus 332 ~~~~~G~y~~~~~~~ 346 (445)
+++ +|+|+|+|+..
T Consensus 111 ~~~-~G~y~f~Ct~p 124 (139)
T d1qhqa_ 111 TPA-PGTYLYICTFP 124 (139)
T ss_dssp CCS-SEEEEEECCST
T ss_pred cCC-CeEEEEEcCCc
Confidence 996 89999999754
|
| >d1mzya2 b.6.1.3 (A:194-371) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Nitrite reductase, NIR species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.18 E-value=0.00097 Score=56.58 Aligned_cols=100 Identities=14% Similarity=0.208 Sum_probs=77.4
Q ss_pred EEEEECCCCCCC----eEEEEcCCEEEEEEEecCCCCCceEeeCCcccCCCCCCCCCCcc------cccCCCCCCceEEE
Q psy16562 99 AILSINRQLPGP----SIQVCKGDTIIVDVKNHMIDREVTLHWHGVYQKVTPWMDGVPMV------TQCPIPSSTTFRYK 168 (445)
Q Consensus 99 ~~~~~Ng~~PGP----tI~v~~GD~v~V~v~N~l~~~~tsiHwHG~~~~~~~~~DGvp~~------tq~pI~pG~~~~Y~ 168 (445)
.-+.+||..=.- .|+++.|++|. +.|.-++..++.|.-|-+...- |.+|.+.. --..|+||+.-.-.
T Consensus 55 thVVFNG~vgaltg~~aL~AkvGEtV~--~~~~gpN~~SsfHvIGg~~D~V-~~~G~~~n~p~~~~qT~~v~~G~a~~~~ 131 (178)
T d1mzya2 55 SHIVFNGAVGALTGEGALKAKVGDNVL--FVHSQPNRDSRPHLIGGHGDLV-WETGKFHNAPERDLETWFIRGGTAGAAL 131 (178)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEE--EEEEESSSCBCEEEETCCEEEE-ETTCCTTSCCEEEESBCCBCTTEEEEEE
T ss_pred CEEEECCccCcccCCCCcccccCCeEE--EecccCCCCCCcccccCccceE-ccCCccCCCCCCCceEEEecCCceeEEE
Confidence 457889865333 69999999974 5777777999999999887532 77765432 11348899988888
Q ss_pred EecCCCcceEEecccchh-hhcCceeEEEEeCCC
Q psy16562 169 FPAMPSGTFFYHSHVGLQ-KMDGLEGSMIIRTPK 201 (445)
Q Consensus 169 f~~~~~GT~wYH~H~~~q-~~~Gl~G~lIV~~~~ 201 (445)
|+..++|+|-|-.|.-.. ...|..|.|.|+.+.
T Consensus 132 ~tf~~PG~Y~~VdH~l~~A~~kGA~g~l~V~G~~ 165 (178)
T d1mzya2 132 YKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 165 (178)
T ss_dssp EECCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred EEeCCCeEEEEEccHHHHHHhCCCeEEEEeCCCC
Confidence 888999999999998544 467999999998774
|
| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]
Probab=96.08 E-value=0.0049 Score=49.96 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=51.6
Q ss_pred cceEEE-ecCcEEEEEEEccCCCceeEEEEecccceEEEcc---------------CCCccee----eEecEEEecCCce
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---------------DGTAVEP----LVVDSVTLFPGDR 325 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~---------------DG~~v~P----~~~~~~~I~pGeR 325 (445)
...|+| ++|+++||.|.|.+... +. +-+|.+.+... ++.+..| ....+..|.|||+
T Consensus 17 ~~~i~V~k~G~~V~l~~~N~g~l~--h~--~m~hn~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~t~~l~pget 92 (129)
T d2ccwa1 17 VKEIVVDKSCKQFTMHLKHVGKMA--KV--AMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGES 92 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCC--HH--HHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred cceEEEecCCCEEEEEEEcCCcCc--hh--eeeccccccCcccHHHHHHHHHHhhhccccCCCccccccccccccCCCce
Confidence 358999 79999999999999642 11 22344444321 1222211 2345678999999
Q ss_pred EEEEEecCC--CCceEEEEEEe
Q psy16562 326 VDVIIHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 326 ~dv~v~~~~--~~G~y~~~~~~ 345 (445)
.++.|++++ .+|+|+|.|..
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~ 114 (129)
T d2ccwa1 93 DSVTFDVSKIAAGENYAYFCSF 114 (129)
T ss_dssp EEEEEEGGGSCTTCCEEEECCS
T ss_pred EEEEEEecccCCCccEEEEeCC
Confidence 999999973 58999999954
|
| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Methylomonas sp. j [TaxId: 32038]
Probab=95.95 E-value=0.0082 Score=48.57 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=50.9
Q ss_pred cceEEEecC-cEEEEEEEccCCCceeEEEEecccceEEEcc---------------CCCccee----eEecEEEecCCce
Q psy16562 266 MHFFKVQRD-KRYLMRIIGGSCLACPLIFTIEKHQLQVIAS---------------DGTAVEP----LVVDSVTLFPGDR 325 (445)
Q Consensus 266 ~~~i~v~~G-~~~rlRliN~~~~~~~~~~~i~gh~~~via~---------------DG~~v~P----~~~~~~~I~pGeR 325 (445)
...|+|++| ++++|.|.|.+... +. +-+|.+.+... +.....| ....+..|.|||+
T Consensus 17 ~~~i~V~aG~e~v~i~~~N~g~lp--h~--~~~Hn~vi~~~~~~~~~~~~~~~~~~~~~~~~p~~~~via~t~~l~pGe~ 92 (129)
T d1cuoa_ 17 TRSISVPASCAEFTVNFEHKGHMP--KT--GMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEK 92 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSC--HH--HHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCE
T ss_pred ccEEEEeCCCEEEEEEEEeCCcCC--ce--eEEeeeeecccccHHHHHHHHHhhcccccCCCCCchhhhhhccccCcccc
Confidence 358999999 89999999999753 22 22344432211 1111112 2235678999999
Q ss_pred EEEEEecCC--CCceEEEEEEe
Q psy16562 326 VDVIIHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 326 ~dv~v~~~~--~~G~y~~~~~~ 345 (445)
.++.|+++. .+|+|.|.|..
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~ 114 (129)
T d1cuoa_ 93 TSVKFKVSALSKDEAYTYFCSY 114 (129)
T ss_dssp EEEEEEGGGCCTTSCEEEECCS
T ss_pred ceEEEEccccCCCceEEEEeCC
Confidence 999999864 48999999853
|
| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Phormidium laminosum) [TaxId: 32059]
Probab=95.80 E-value=0.0033 Score=48.72 Aligned_cols=75 Identities=9% Similarity=0.134 Sum_probs=47.2
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc--eeeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV--EPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v--~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
....|++++|++|+| +|.... ++...+...... ++... .........+.||+.+.+.+.+...+|.|+|+
T Consensus 17 ~P~~l~v~~GdtV~f--~n~~~~--~h~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~G~y~y~ 88 (105)
T d2q5ba1 17 EPANVTVHPGDTVKW--VNNKLP--PHNILFDDKQVP----GASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYY 88 (105)
T ss_dssp ESSEEEECTTEEEEE--EECSSC--CEEEEECGGGSG----GGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEE
T ss_pred eCCEEEECCCCEEEE--EECCCC--CceeEeecCccc----ccccccCCccccccccccCCceEEEEEEeccCCceEEEE
Confidence 345899999999876 565543 233333222110 01000 01234567889999999999987778999999
Q ss_pred EEecC
Q psy16562 343 AKTLC 347 (445)
Q Consensus 343 ~~~~~ 347 (445)
|...|
T Consensus 89 C~~H~ 93 (105)
T d2q5ba1 89 CAPHR 93 (105)
T ss_dssp CSTTG
T ss_pred eCCCC
Confidence 96543
|
| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Periplasmic domain of cytochrome c oxidase subunit II domain: Cytochrome c oxidase species: Thermus thermophilus, ba3 type [TaxId: 274]
Probab=95.65 E-value=0.037 Score=44.07 Aligned_cols=61 Identities=16% Similarity=0.315 Sum_probs=46.7
Q ss_pred ceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEec
Q psy16562 267 HFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKTL 346 (445)
Q Consensus 267 ~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~~ 346 (445)
..|.++.|++|+|+|.|... .+.|.|..... ++.+.||+.-.+.|++++ +|+|++.|.-.
T Consensus 47 ~~l~vp~G~~V~~~lts~DV---~H~f~ip~~~v----------------~~d~~PG~~~~~~~~~~~-~G~y~~~C~~~ 106 (122)
T d2cuaa_ 47 NPIEVPQGAEIVFKITSPDV---IHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQY 106 (122)
T ss_dssp SSEEEETTSEEEEEEEBSSS---CEEEEETTSSC----------------EEEECBTBCEEEEEECCS-CEEEEEECCSC
T ss_pred CEEEEeCCCEEEEEEEcCCc---cceeEecCCCe----------------eEEEecCceEEEEEEecc-ceeEEEEehhc
Confidence 36999999999999998763 34555544332 234678999999999987 89999999866
Q ss_pred C
Q psy16562 347 C 347 (445)
Q Consensus 347 ~ 347 (445)
|
T Consensus 107 C 107 (122)
T d2cuaa_ 107 C 107 (122)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1sddb1 b.6.1.3 (B:1657-1723) Coagulation factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Multidomain cupredoxins domain: Coagulation factor V species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.55 E-value=0.005 Score=43.84 Aligned_cols=41 Identities=7% Similarity=0.162 Sum_probs=32.8
Q ss_pred ecCCceEEEEEecCCCCc---------eEEEEEEec-----CCCceeeEEEEEcC
Q psy16562 320 LFPGDRVDVIIHTNQSNN---------LYWMQAKTL-----CDSITAEAVLQYEG 360 (445)
Q Consensus 320 I~pGeR~dv~v~~~~~~G---------~y~~~~~~~-----~~~~~~~ail~y~~ 360 (445)
|.|||+|.|.+++++..| +||||+|.. ..++.+..||.-.+
T Consensus 3 V~PG~t~tY~w~v~~~~gp~~~d~~c~t~~YHsHv~~~~q~~~GL~G~liV~~~g 57 (67)
T d1sddb1 3 IQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 57 (67)
T ss_dssp BCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CCCCCeEEEEEEcCCcCCCccCCCCceeEEEEcccchHHHhhCCceEEEEEcCCC
Confidence 789999999999988655 999999976 46777776665443
|
| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.43 E-value=0.014 Score=47.09 Aligned_cols=76 Identities=12% Similarity=0.175 Sum_probs=50.7
Q ss_pred cceEEE-ecCcEEEEEEEccCCCceeEEEEecccceEEEc---------------cCCCccee----eEecEEEecCCce
Q psy16562 266 MHFFKV-QRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIA---------------SDGTAVEP----LVVDSVTLFPGDR 325 (445)
Q Consensus 266 ~~~i~v-~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via---------------~DG~~v~P----~~~~~~~I~pGeR 325 (445)
...|+| ++|+++||.+.|.+... +++-+ |..-+.. .+..+..| ....+..|.|||+
T Consensus 17 ~~~i~V~k~Ge~v~l~~~N~g~~p--H~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~vi~~t~~l~pGes 92 (128)
T d1jzga_ 17 TNAITVDKSCKQFTVNLSHPGNLP--KNVMG--HNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEK 92 (128)
T ss_dssp CSEEEECTTCSEEEEEEECCSSSC--HHHHC--BCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCCEECCCBCTTCE
T ss_pred cceEEEecCCCEEEEEEEeCCccc--hheee--cCcccccchhHHHHHHHHHhhhhccccCCCCccchhhcccccCCCce
Confidence 358999 58999999999999753 33222 3322221 01112212 1235678999999
Q ss_pred EEEEEecC--CCCceEEEEEEe
Q psy16562 326 VDVIIHTN--QSNNLYWMQAKT 345 (445)
Q Consensus 326 ~dv~v~~~--~~~G~y~~~~~~ 345 (445)
.++.|+++ ..+|+|-|.|..
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~ 114 (128)
T d1jzga_ 93 DSVTFDVSKLKEGEQYMFFCTF 114 (128)
T ss_dssp EEEEEEGGGCCTTCCEEEECCS
T ss_pred EEEEEEeeccCCCceEEEEECC
Confidence 99999987 358999998853
|
| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]
Probab=95.33 E-value=0.0081 Score=46.01 Aligned_cols=68 Identities=7% Similarity=0.089 Sum_probs=43.0
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce---eeEecEEEecCCceEEEEEecCCCCceEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE---PLVVDSVTLFPGDRVDVIIHTNQSNNLYW 340 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~---P~~~~~~~I~pGeR~dv~v~~~~~~G~y~ 340 (445)
+..+.|++++|++++|. |.+... +++. ...|+.+.. ........+.+|+.+++.| +. +|+|+
T Consensus 16 F~P~~i~v~~GdtV~~~--n~~~~~--H~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~t~~~tf--~~-~G~y~ 80 (98)
T d1pcsa_ 16 FEPSTVTIKAGEEVKWV--NNKLSP--HNIV--------FDADGVPADTAAKLSHKGLLFAAGESFTSTF--TE-PGTYT 80 (98)
T ss_dssp EESSEEEECTTCEEEEE--ECSSCC--EEEE--------ECCSSSCHHHHHHHCEEEEECSTTCEEEEEC--CS-CEEEE
T ss_pred EeCCEEEECCCCEEEEe--ECCCCc--cceE--------EeccccCCCccccccccccccCCCcEEEEec--cC-CceEE
Confidence 33468999999998875 655432 2221 122443321 1234667789999888765 44 79999
Q ss_pred EEEEec
Q psy16562 341 MQAKTL 346 (445)
Q Consensus 341 ~~~~~~ 346 (445)
|+|...
T Consensus 81 Y~C~~H 86 (98)
T d1pcsa_ 81 YYCEPH 86 (98)
T ss_dssp EECGGG
T ss_pred EEeccC
Confidence 999543
|
| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Anabaena variabilis [TaxId: 1172]
Probab=95.28 E-value=0.0059 Score=47.21 Aligned_cols=69 Identities=6% Similarity=0.071 Sum_probs=44.9
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc-----e-eeEecEEEecCCceEEEEEecCCCCceE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV-----E-PLVVDSVTLFPGDRVDVIIHTNQSNNLY 339 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v-----~-P~~~~~~~I~pGeR~dv~v~~~~~~G~y 339 (445)
...|++++|++|+| +|.+... +...+ ..++.+. . ........+.|++.+.+.+.+...+|+|
T Consensus 18 P~~i~v~~GdtV~f--~n~~~~~--h~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~G~y 85 (105)
T d2cj3a1 18 PAKLTIKPGDTVEF--LNNKVPP--HNVVF--------DAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEY 85 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSCC--EEEEE--------CSSSSTTCCHHHHHHHCEEEEECSTTCEEEEECCTTCCSEEE
T ss_pred CCEEEECCCCEEEE--EECCCCc--eeeEe--------ccCCCCccccccCCcccccccccCCCcceEEEEEeccCCceE
Confidence 45899999999887 4555432 12111 1122111 0 1234567789999999999877668999
Q ss_pred EEEEEec
Q psy16562 340 WMQAKTL 346 (445)
Q Consensus 340 ~~~~~~~ 346 (445)
||.|...
T Consensus 86 ~y~C~~H 92 (105)
T d2cj3a1 86 TFYCEPH 92 (105)
T ss_dssp EEECTTT
T ss_pred EEEeCCC
Confidence 9999643
|
| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Azurin species: Pseudomonas putida [TaxId: 303]
Probab=95.20 E-value=0.02 Score=46.09 Aligned_cols=76 Identities=9% Similarity=0.161 Sum_probs=52.1
Q ss_pred cceEEEe-cCcEEEEEEEccCCCceeEEEEecccceEEEccC---------------CCcce----eeEecEEEecCCce
Q psy16562 266 MHFFKVQ-RDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASD---------------GTAVE----PLVVDSVTLFPGDR 325 (445)
Q Consensus 266 ~~~i~v~-~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~D---------------G~~v~----P~~~~~~~I~pGeR 325 (445)
...|+|. .|++++|.|.|.+... +. +-+|.+-+...+ ..++. +....+..|.|||.
T Consensus 17 ~~~i~V~~~ge~v~i~~~N~g~~p--H~--~~~hn~vi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vla~t~~l~pGes 92 (128)
T d1nwpa_ 17 TKDIAIDKSCKTFTVELTHSGSLP--KN--VMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEK 92 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCC--HH--HHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCE
T ss_pred CCeEEEecCCcEEEEEEEeCCccc--cc--eeeecccccccchhHHHHHHHHhhhccccCCCCCchhheeecccccCCCc
Confidence 3589995 6999999999999753 23 334444333211 11221 23456778999999
Q ss_pred EEEEEecCC--CCceEEEEEEe
Q psy16562 326 VDVIIHTNQ--SNNLYWMQAKT 345 (445)
Q Consensus 326 ~dv~v~~~~--~~G~y~~~~~~ 345 (445)
.++.|++++ .+|+|-|.|..
T Consensus 93 ~~i~f~~p~~~~~G~Y~f~Ct~ 114 (128)
T d1nwpa_ 93 DSVTFDVSKLAAGEKYGFFCSF 114 (128)
T ss_dssp EEEEEEGGGSCTTSCEEEECCS
T ss_pred eEEEEEecccCCCceEEEEECC
Confidence 999999973 57999998853
|
| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Poplar (Populus nigra), variant italica [TaxId: 3691]
Probab=94.83 E-value=0.0045 Score=47.64 Aligned_cols=78 Identities=8% Similarity=0.206 Sum_probs=43.9
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcce--eeEecEEEecCCceEEEEEecCCCCceEEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQ 342 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~ 342 (445)
....|++++|++|+| +|.+.. ++.+.+...... .|.... ........+.||+++++.| ++ +|+|.|+
T Consensus 15 ~P~~iti~~GdtV~f--~n~~~~--~Hnv~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~t~~~tF--~~-~G~y~Y~ 83 (99)
T d1plca_ 15 VPSEFSISPGEKIVF--KNNAGF--PHNIVFDEDSIP----SGVDASKISMSEEDLLNAKGETFEVAL--SN-KGEYSFY 83 (99)
T ss_dssp ESSEEEECTTCEEEE--EECSSC--CBCCEECTTSSC----TTCCHHHHCCCTTCCBCSTTCEEEEEC--CS-CEEEEEE
T ss_pred eCCEEEECCCCEEEE--EECCCC--CccEEEccCcCC----CccccccCcccccccccCCCceEEEec--CC-CceEEEE
Confidence 346899999999987 576543 233222221110 111111 1112345568999988765 44 7999999
Q ss_pred EEec-CCCceee
Q psy16562 343 AKTL-CDSITAE 353 (445)
Q Consensus 343 ~~~~-~~~~~~~ 353 (445)
|... ..++.+.
T Consensus 84 C~pH~~~GM~G~ 95 (99)
T d1plca_ 84 CSPHQGAGMVGK 95 (99)
T ss_dssp CGGGTTTTCEEE
T ss_pred eCCCcCCCcEEE
Confidence 9654 2334444
|
| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]
Probab=94.10 E-value=0.077 Score=39.69 Aligned_cols=64 Identities=9% Similarity=0.183 Sum_probs=41.6
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQA 343 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~ 343 (445)
+..+.|++++|++++| +|..... +.+.+ ++.. +...+...+.+|+.+++.| +. +|+|.|+|
T Consensus 16 F~P~~i~I~~GdtV~f--~n~d~~~--h~~~~----------~~~~--~~~~~~~~~~~g~~~~~tF--~~-~G~y~Y~C 76 (91)
T d1bxua_ 16 FEPSTIEIQAGDTVQW--VNNKLAP--HNVVV----------EGQP--ELSHKDLAFSPGETFEATF--SE-PGTYTYYC 76 (91)
T ss_dssp EESSEEEECTTCEEEE--EECSSCC--EEEEE----------TTCG--GGCEEEEECSTTCEEEEEC--CS-CEEEEEEC
T ss_pred EECCEEEECCCCEEEE--EECCcCC--ceEEe----------cccc--cccccccccCCCCCEEEEe--cc-CceEEEEe
Confidence 3456899999998876 5766542 23222 1211 2223556789999888765 44 79999999
Q ss_pred Eec
Q psy16562 344 KTL 346 (445)
Q Consensus 344 ~~~ 346 (445)
...
T Consensus 77 ~~H 79 (91)
T d1bxua_ 77 EPH 79 (91)
T ss_dssp TTT
T ss_pred CCC
Confidence 543
|
| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=93.96 E-value=0.053 Score=40.90 Aligned_cols=78 Identities=8% Similarity=0.144 Sum_probs=43.8
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++|+|. |.+... +.+.+...... ++..............++.++.+.+ +. +|+|+|+|..
T Consensus 17 P~~i~v~~GdtV~f~--n~~~~~--h~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~~tf--~~-~G~y~y~C~~ 85 (98)
T d2plta_ 17 PKTLTIKSGETVNFV--NNAGFP--HNIVFDEDAIP----SGVNADAISRDDYLNAPGETYSVKL--TA-AGEYGYYCEP 85 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSCC--EEEEECGGGSC----TTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEE--ECCCCc--eeEEEecCCcc----ccccCCcccccccccCCCceEEEEe--cC-CceEEEEeCc
Confidence 468999999998774 555432 22222211100 1111112234566778888877654 44 7999999965
Q ss_pred cC-CCceeeE
Q psy16562 346 LC-DSITAEA 354 (445)
Q Consensus 346 ~~-~~~~~~a 354 (445)
.+ .++.+..
T Consensus 86 H~~~GM~G~I 95 (98)
T d2plta_ 86 HQGAGMVGKI 95 (98)
T ss_dssp GGGGTCEEEE
T ss_pred CCCCCCEEEE
Confidence 43 3344443
|
| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Ulva pertusa, a sea lettuce [TaxId: 3120]
Probab=93.60 E-value=0.059 Score=40.71 Aligned_cols=77 Identities=8% Similarity=0.075 Sum_probs=43.9
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc----eeeEecEEEecCCceEEEEEecCCCCceE
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV----EPLVVDSVTLFPGDRVDVIIHTNQSNNLY 339 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v----~P~~~~~~~I~pGeR~dv~v~~~~~~G~y 339 (445)
+....|++++|++|+|. |.+... +.+.+. .++.+. .........+.+++.+.+.+ +. +|+|
T Consensus 15 F~P~~i~i~~GdtV~f~--n~~~~~--h~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f--~~-~G~y 79 (98)
T d1iuza_ 15 FVPSKISVAAGEAIEFV--NNAGFP--HNIVFD--------EDAVPAGVDADAISYDDYLNSKGETVVRKL--ST-PGVY 79 (98)
T ss_dssp EESSEEEECTTCEEEEE--ECSSCC--EEEEEC--------TTSSCTTCCHHHHCEEEEECSTTCEEEEEC--CS-CEEE
T ss_pred EeCCEEEECCCCEEEEE--ECCCCc--ccEEEe--------CCCcccccccccccccCcccCCCcEEEEec--CC-CceE
Confidence 33468999999999874 555432 222211 111111 11223456678888887655 44 7999
Q ss_pred EEEEEecC-CCceeeEE
Q psy16562 340 WMQAKTLC-DSITAEAV 355 (445)
Q Consensus 340 ~~~~~~~~-~~~~~~ai 355 (445)
+|.|...+ .++.+..+
T Consensus 80 ~y~C~~H~~~GM~G~I~ 96 (98)
T d1iuza_ 80 GVYCEPHAGAGMKMTIT 96 (98)
T ss_dssp EEECTTTGGGTCEEEEE
T ss_pred EEEeCCCccCCCeEEEE
Confidence 99996543 33444433
|
| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: White campion (Silene pratensis) [TaxId: 52853]
Probab=93.28 E-value=0.016 Score=44.11 Aligned_cols=77 Identities=9% Similarity=0.198 Sum_probs=42.6
Q ss_pred ccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccC-CCcce--eeEecEEEecCCceEEEEEecCCCCceEEE
Q psy16562 265 PMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASD-GTAVE--PLVVDSVTLFPGDRVDVIIHTNQSNNLYWM 341 (445)
Q Consensus 265 p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~D-G~~v~--P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~ 341 (445)
....|++++|++|+|+ |.+...+.+. .... +.+ +.... ....+...+.+++++++.++ + +|+|+|
T Consensus 15 ~P~~i~v~~GdtV~f~--n~~~~~h~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~tf~--~-~G~y~y 82 (99)
T d1bypa_ 15 VPSDLSIASGEKITFK--NNAGFPHNDL--FDKK-----EVPAGVDVTKISMPEEDLLNAPGEEYSVTLT--E-KGTYKF 82 (99)
T ss_dssp ESSEEEECTTEEEEEE--ECSSCCBCCE--ECTT-----SSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC--S-CEEEEE
T ss_pred cCCEEEECCCCEEEEE--ECCCCceeEE--EecC-----CCCCccccccCcccccccccCCCceEEEEec--C-CceEEE
Confidence 3468999999998875 5554322211 1110 011 11110 11224456788888887764 3 799999
Q ss_pred EEEecC-CCceee
Q psy16562 342 QAKTLC-DSITAE 353 (445)
Q Consensus 342 ~~~~~~-~~~~~~ 353 (445)
+|...+ .++.+.
T Consensus 83 ~C~~H~~~GM~G~ 95 (99)
T d1bypa_ 83 YCAPHAGAGMVGK 95 (99)
T ss_dssp ECGGGTTTTCEEE
T ss_pred EECcCCCCCCEEE
Confidence 996543 334443
|
| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]
Probab=91.66 E-value=0.13 Score=38.47 Aligned_cols=75 Identities=11% Similarity=0.116 Sum_probs=41.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++|+|...+.+... ..+ ....++............+.+++.+++.+ +. +|+|+|+|..
T Consensus 18 P~~i~V~~GdtV~f~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~tf--~~-~G~y~Y~C~~ 84 (97)
T d2jxma1 18 PKALSISAGDTVEFVMNKVGPHN--VIF--------DKVPAGESAPALSNTKLAIAPGSFYSVTL--GT-PGTYSFYCTP 84 (97)
T ss_dssp SSEEEECTTCEEEEEECSSCCCC--BEE--------EECCTTSCHHHHCBCCCCCSCSCCEEEEC--CS-CSEEEEECSS
T ss_pred CCEEEECCCCEEEEEECCCccee--EEE--------ecCCCccccccccccccccCcceEEEEec--CC-CeEEEEEEcc
Confidence 35899999999998644444321 111 11112211111112344567777777655 44 7999999955
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 85 H~~~GM~G~ 93 (97)
T d2jxma1 85 HRGAGMVGT 93 (97)
T ss_dssp TTTTTCEEE
T ss_pred CCCCCCEEE
Confidence 42 334444
|
| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plastocyanin species: Fern (Adiantum capillus-veneris) [TaxId: 13818]
Probab=90.95 E-value=0.015 Score=44.50 Aligned_cols=78 Identities=4% Similarity=-0.087 Sum_probs=42.4
Q ss_pred cccceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcc--------eeeEecEEEecCCceEEEEEecCCC
Q psy16562 264 VPMHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAV--------EPLVVDSVTLFPGDRVDVIIHTNQS 335 (445)
Q Consensus 264 ~p~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v--------~P~~~~~~~I~pGeR~dv~v~~~~~ 335 (445)
+..+.|++++|++|+|. |.+...+. +.+...++..- ...........+|+++++.+ ++
T Consensus 14 F~P~~l~v~~GdtV~f~--n~~~~~h~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f--~~- 79 (102)
T d1kdja_ 14 FYPDSITVSAGEAVEFT--LVGETGHN---------IVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV--ST- 79 (102)
T ss_dssp EESSEEEECTTCCEEEE--ECSSSCBC---------CEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC--CS-
T ss_pred EeCCEEEECCCCEEEEE--ECCCCcee---------EEEecCCCCCcccccccccCcccccccccCCccEEEEee--CC-
Confidence 33468999999998875 55533211 11111111110 01122344567777777655 44
Q ss_pred CceEEEEEEecC-CCceeeEE
Q psy16562 336 NNLYWMQAKTLC-DSITAEAV 355 (445)
Q Consensus 336 ~G~y~~~~~~~~-~~~~~~ai 355 (445)
+|+|+|+|...+ .++.+..+
T Consensus 80 ~G~y~Y~C~~H~~~GM~G~I~ 100 (102)
T d1kdja_ 80 PGTYTFYCTPHKSANMKGTLT 100 (102)
T ss_dssp CEEEEEECSTTGGGTCEEEEE
T ss_pred CceEEEEecCCcccCCeEEEE
Confidence 799999996543 34444433
|
| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus denitrificans [TaxId: 266]
Probab=90.02 E-value=0.19 Score=38.37 Aligned_cols=62 Identities=10% Similarity=0.146 Sum_probs=38.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEcc-CCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEE
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIAS-DGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAK 344 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~-DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~ 344 (445)
.+.|++++|++|.| +|..... |.+...+. ++. ...+.-.+.+|+.+++.| ++ +|+|.|+|.
T Consensus 32 P~~i~V~~GdtV~f--~N~d~~~---------H~v~~~~~~~~~----~~~~~~~~~~g~~~~~tf--~~-pG~y~y~C~ 93 (105)
T d2ov0a1 32 TPELHVKVGDTVTW--INREAMP---------HNVHFVAGVLGE----AALKGPMMKKEQAYSLTF--TE-AGTYDYHCT 93 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSSC---------BCCEECTTTSSS----SCEECCCBCTTEEEEEEE--CS-CEEEEEECS
T ss_pred CCEEEECCCCEEEE--EECCCCc---------eeEEEecccCCc----ccccccccCCCceEEEEe--cC-CeEEEEEec
Confidence 35899999999987 5765432 22222221 110 112344578999988876 44 799999984
Q ss_pred e
Q psy16562 345 T 345 (445)
Q Consensus 345 ~ 345 (445)
.
T Consensus 94 ~ 94 (105)
T d2ov0a1 94 P 94 (105)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Thiosphaera pantotropha [TaxId: 82367]
Probab=89.24 E-value=0.21 Score=39.31 Aligned_cols=70 Identities=10% Similarity=0.029 Sum_probs=40.1
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|+|++|++|+|. |..... . ...+++ +. +.........+++.|++.|+ . +|.|.|.|..
T Consensus 20 P~~itI~~GdtV~f~--n~~~~~-~-~~~~~~--------~~----~~~~~~~~~~~~~~~~~tF~--~-~G~Y~Y~C~p 80 (123)
T d1adwa_ 20 PAFVRAEPGDVINFV--PTDKSH-N-VEAIKE--------IL----PEGVESFKSKINESYTLTVT--E-PGLYGVKCTP 80 (123)
T ss_dssp SSEEEECTTEEEEEE--ESSSSC-C-CEECTT--------SC----CTTCCCCBCCTTCCEEEEEC--S-CEEEEEECGG
T ss_pred CCEEEECCCCEEEEE--eCCCCc-c-eecccC--------cc----ccccccccccCCcceEEecc--C-CCeEEEEEcc
Confidence 468999999999995 444321 1 111111 10 11123334577788877764 3 7999999976
Q ss_pred c-CCCceeeE
Q psy16562 346 L-CDSITAEA 354 (445)
Q Consensus 346 ~-~~~~~~~a 354 (445)
. ..++.+..
T Consensus 81 H~~~GM~G~I 90 (123)
T d1adwa_ 81 HFGMGMVGLV 90 (123)
T ss_dssp GGGGTCEEEE
T ss_pred CCCCCCEEEE
Confidence 5 23444443
|
| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Methylobacterium extorquens, strain am1 [TaxId: 408]
Probab=86.54 E-value=0.24 Score=39.01 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=38.8
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|+|++|++|+|...+.... ...+.... .++ .......+|+.+.+.| +. +|.|.|.|..
T Consensus 20 P~~ltV~~GDTV~f~n~d~~~h----~~~~~~~~-----~~~-------~~~~~~~~~~~~~~tF--~~-~G~Y~Y~C~p 80 (123)
T d1pmya_ 20 PALVRLKPGDSIKFLPTDKGHN----VETIKGMA-----PDG-------ADYVKTTVGQEAVVKF--DK-EGVYGFKCAP 80 (123)
T ss_dssp SSEEEECTTCEEEEECSSSSCC----CEECTTSS-----CTT-------CCCCBCCTTSCEEEEC--CS-CEEEEEECST
T ss_pred CCEEEECCCCEEEEeeCCCCcc----cccccccC-----ccc-------cccccccccccccccc--CC-CceEEEEecc
Confidence 4689999999998854433211 11111110 111 2233446678777665 44 7999999966
Q ss_pred cC-CCceee
Q psy16562 346 LC-DSITAE 353 (445)
Q Consensus 346 ~~-~~~~~~ 353 (445)
.+ .++.+.
T Consensus 81 H~~~GM~G~ 89 (123)
T d1pmya_ 81 HYMMGMVAL 89 (123)
T ss_dssp TTTTTCEEE
T ss_pred CCCCCCEEE
Confidence 52 334444
|
| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Amicyanin species: Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]
Probab=86.51 E-value=0.41 Score=36.41 Aligned_cols=63 Identities=10% Similarity=0.097 Sum_probs=37.6
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
.+.|.|++|+++.| +|.... ++.+.... . . .....-+.-.+.+|+++.+.| ++ +|+|.|+|..
T Consensus 33 P~~i~V~~GdtV~f--~N~d~~--~H~v~~~~-------~-~--~~~~~f~s~~~~~~~~~~~tf--~~-~G~y~y~C~~ 95 (106)
T d1id2a_ 33 TPEVTIKAGETVYW--VNGEVM--PHNVAFKK-------G-I--VGEDAFRGEMMTKDQAYAITF--NE-AGSYDYFCTP 95 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSS--CBCCEECT-------T-T--SSSSCEECCCBCTTEEEEEEE--CS-CEEEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCCC--ceeEEecc-------c-c--CCcccccccccCCCceEEEec--CC-CeEEEEEccC
Confidence 35899999999876 676643 22222211 1 0 001112333567899888766 44 7999999854
|
| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Pseudoazurin species: Achromobacter cycloclastes [TaxId: 223]
Probab=85.01 E-value=0.29 Score=38.69 Aligned_cols=69 Identities=9% Similarity=-0.021 Sum_probs=39.0
Q ss_pred cceEEEecCcEEEEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecCCCCceEEEEEEe
Q psy16562 266 MHFFKVQRDKRYLMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTNQSNNLYWMQAKT 345 (445)
Q Consensus 266 ~~~i~v~~G~~~rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~~~~G~y~~~~~~ 345 (445)
...|++++|++|.|...+.+. ... ++.... |.........+++.|++.| +. +|+|.|.|..
T Consensus 20 P~~itI~~GdTV~w~n~~~~~---~~~---------~~~~~~----p~~~~~~~~~~~~~~s~Tf--~~-~G~Y~Y~C~p 80 (124)
T d1bqka_ 20 PASLKVAPGDTVTFIPTDKGH---NVE---------TIKGMI----PDGAEAFKSKINENYKVTF--TA-PGVYGVKCTP 80 (124)
T ss_dssp SSEEEECTTCEEEEECSSSSC---CCE---------ECTTCS----CTTCCCCBCCTTCCEEEEC--CS-CEEEEEECTT
T ss_pred CCEEEECCCCeEEEEECCCCc---ccc---------cccccC----CCccccccccCCccEEEec--CC-CceEEEEecc
Confidence 358999999998885433321 111 111110 1112334456788877665 44 7999999965
Q ss_pred c-CCCceee
Q psy16562 346 L-CDSITAE 353 (445)
Q Consensus 346 ~-~~~~~~~ 353 (445)
. ..++.+.
T Consensus 81 H~~~GM~G~ 89 (124)
T d1bqka_ 81 HYGMGMVGV 89 (124)
T ss_dssp TGGGTCEEE
T ss_pred CcCCCCEEE
Confidence 5 2344443
|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: E set domains family: E-set domains of sugar-utilizing enzymes domain: Sialidase, "linker" domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=83.47 E-value=7 Score=29.04 Aligned_cols=72 Identities=18% Similarity=0.182 Sum_probs=45.2
Q ss_pred cceEEEecCcEE--EEEEEccCCCceeEEEEecccceEEEccCCCcceeeEecEEEecCCceEEEEEecC----CCCceE
Q psy16562 266 MHFFKVQRDKRY--LMRIIGGSCLACPLIFTIEKHQLQVIASDGTAVEPLVVDSVTLFPGDRVDVIIHTN----QSNNLY 339 (445)
Q Consensus 266 ~~~i~v~~G~~~--rlRliN~~~~~~~~~~~i~gh~~~via~DG~~v~P~~~~~~~I~pGeR~dv~v~~~----~~~G~y 339 (445)
.|.+.+++|+.+ .+++.|.+...+ ..-.+.+-+-.|=.+++ ....|.|||+.++.|+.. ..+|+|
T Consensus 8 ~p~~~v~pG~~~~~~vtVtN~g~~~~------~~~~~~~~~P~GW~v~~---~~~~L~pG~s~~~~~~Vt~p~~a~~G~Y 78 (103)
T d1w8oa1 8 IPDVALEPGQQVTVPVAVTNQSGIAV------PKPSLQLDASPDWQVQG---SVEPLMPGRQAKGQVTITVPAGTTPGRY 78 (103)
T ss_dssp CCCEEECTTCEEEEEEEEECCSSSCB------SSCEEEEECCTTSEEEE---EECCBCTTCEEEEEEEEECCTTCCCEEE
T ss_pred CcceeeCCCCeEEEEEEEEeCCCCce------eeeeEEEcCCCCccccC---cceeeCCCCcEEEEEEEECCCCCCCceE
Confidence 357899999866 578899986542 12222222223332322 344589999988877643 347999
Q ss_pred EEEEEec
Q psy16562 340 WMQAKTL 346 (445)
Q Consensus 340 ~~~~~~~ 346 (445)
.+.+...
T Consensus 79 ~i~~~a~ 85 (103)
T d1w8oa1 79 RVGATLR 85 (103)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9877654
|