Psyllid ID: psy16788

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
MRCLLMVVTVLATLNSITISTTSAEDSVQLDKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRYN
cEEEHHHHHHHHHHHcccccccccccHHcccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccccccccccccccEEEEEEEcccccccccEEEEEEEEEccccccccccccEEEEEEEEEEccccccccccEEEEEEEEEEEcccccccEEEccHHHHHHHHHccccccEEEEEEEccccccccccccccEEccccccccccccccccccEEEEcccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHccccccccEEEEcEEEEcccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccEEEEEEEccccEEEccccccEEEccccccc
cEEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccccccccccccccEEEEEccccccccccccccccEEEEEEccccccccEEEEEEEEEEEcccccccccccEEEEEEEEEEccccccccccEEEEEEEEEEEccccccEEEEEccHHHHHHHHcccccccEEEEEEEcccccccccccEEEEEcccccccccccccccccEEEEEEccccccccccHHHccccccccccccccccccccccccEEEccEEEcHHHcccccEEccccccccccEEccEEEHHHHcccccEEEccEEEccEEEcEccccccHHHcccHHHHHHHHHHHHcccccccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccc
MRCLLMVVTVLATLNSITIsttsaedsvQLDKKALQQVESNLLSLfglnrrprpnrknvripKAMLDLYKlqtgqdvdtsmlplpgrhtrsantvrtFTHQVTNIDKRFKYLNKFRlhfdvtslpdtervQSAElrlsrpmnyeedkHEQIQRIIVKDIlqpgikgiskpvlRIVDSVLVdstsgengvsldvlpavqrwtkspehnhgllievtnrdgvlldrnirplvvmkrdqeeyndlewtslepilflysddgrnkQKSLEDLlkrprrtpndnaprkhkkntysickrhplyvdfadvgwnDWIVENIRKIlipyrhplyvdfadvgwndwivappgydafvckgdcpfplaehlnsTNHAIVQTLMnsvqpetvpkaccvptALSAISMLYLDEDNKVVLKTYQDMavtgcgcryn
MRCLLMVVTVLATLNSItisttsaedsvqLDKKALQQVESNLlslfglnrrprpnrknvripKAMLDLYKLQTGQDVDtsmlplpgrhtrsantvrtfthqvtnidKRFKYLNKFRLhfdvtslpdtervqsaelrlsrpmnyeedkheqIQRIIVKDIlqpgikgiskpvLRIVDSVLVDstsgengvsldVLPAVQRWtkspehnhgllievtnrdgvlldrnirplvvmkrdqeeyndlewtslEPILFlysddgrnKQKSLedllkrprrtpndnaprkhkkntysickrhpLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDmavtgcgcryn
MRCLLMVVTVLATLNSITISTTSAEDSVQLDKKALQQVESNLLSLFGLnrrprpnrknvripKAMLDLYKLQTGQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRYN
**CLLMVVTVLATLNSITISTT******************NLLSLFGL***********RIPKAMLDLYKLQTGQ****************ANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSL*************************QIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYS********************************TYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR**
MRCLLMVVTVLATLN*************************************************MLDLYKL*********************NTV******************KFRLHFDVTSLPDTERVQSAELRLSRPMNYE***HEQIQRIIVKDILQPG***********************NGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLV****************************************************************************************IPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRY*
MRCLLMVVTVLATLNSITISTTSAEDSVQLDKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRYN
MRCLLMVVTVLATLNSITI******DSVQLDKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQD***SMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRD*E**NDLEWTSLEPILFLYSDDG*********************************CKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRYN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRCLLMVVTVLATLNSITISTTSAEDSVQLDKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCRYN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query423 2.2.26 [Sep-21-2011]
Q26974372 Protein decapentaplegic O yes N/A 0.836 0.951 0.411 6e-88
P91699616 Protein decapentaplegic O no N/A 0.853 0.586 0.403 6e-86
P07713588 Protein decapentaplegic O yes N/A 0.846 0.608 0.412 8e-86
P91706593 Protein decapentaplegic O N/A N/A 0.846 0.603 0.412 9e-86
P25703398 Bone morphogenetic protei N/A N/A 0.839 0.891 0.442 3e-79
Q90752405 Bone morphogenetic protei yes N/A 0.886 0.925 0.413 8e-79
P30884398 Bone morphogenetic protei N/A N/A 0.832 0.884 0.427 4e-77
P12644408 Bone morphogenetic protei yes N/A 0.815 0.845 0.428 4e-75
P30885401 Bone morphogenetic protei N/A N/A 0.806 0.850 0.422 5e-75
P12643396 Bone morphogenetic protei no N/A 0.817 0.873 0.411 2e-74
>sp|Q26974|DECA_TRICA Protein decapentaplegic OS=Tribolium castaneum GN=dpp PE=3 SV=1 Back     alignment and function desciption
 Score =  324 bits (831), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 163/396 (41%), Positives = 248/396 (62%), Gaps = 42/396 (10%)

Query: 27  SVQLDKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQDVDTSMLPLPG 86
           S+ + ++ L + +S LL LFGL  +P+   K V++P+A+  +Y +Q   + DT+ LPLPG
Sbjct: 18  SLSIPQQILNEFKSTLLPLFGLKEQPKIEGK-VQVPEALKKIYNIQNNFEYDTASLPLPG 76

Query: 87  RHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEED 146
            +T+SANT+R+FTH  + ID++F + ++FRL F+++S+P  E++ +AE++L+R     ++
Sbjct: 77  LYTKSANTIRSFTHVESPIDEKFVHPHRFRLKFNISSIPRHEKLTAAEIKLTR--ETAKN 134

Query: 147 KHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEH 206
                QR++V DILQPG+KG+  P+ R++DS +VDS      VS+DV PAV RW + P+ 
Sbjct: 135 TSHPFQRVLVHDILQPGVKGLHGPITRVIDSKVVDSRKNTT-VSIDVFPAVARWMQDPKT 193

Query: 207 NHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEWTSLEPILFLYSDDGRNKQKSLE 266
           NHG+LI V +     +     P     R + +    +W   +P+LF Y+DDG+N+Q++  
Sbjct: 194 NHGILIVVYS-----IGAKKSPPEKHLRLRRDTAPPQWYQHQPLLFTYTDDGKNQQRTGT 248

Query: 267 DLLK-RPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPL 325
           +L K RP+R     + R+H+KN    C+R  +YVDF  VGWN                  
Sbjct: 249 ELTKMRPKR----QSSRRHRKNLKDPCRRRQMYVDFGSVGWN------------------ 286

Query: 326 YVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKAC 385
                     DWIVAP GYDA+ C G+C +P+ +H+N+TNHAIVQ+L+NS++P+ VP  C
Sbjct: 287 ----------DWIVAPLGYDAYYCGGECEYPIPDHMNTTNHAIVQSLVNSMKPKEVPGPC 336

Query: 386 CVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR 421
           CVPT L  +SMLYL  D  V+LK Y++M V GCGCR
Sbjct: 337 CVPTQLGQMSMLYLGSDGSVILKNYKEMVVVGCGCR 372
Acts as an extracellular morphogen to establish at least two cellular response thresholds within the dorsal half of the drosophila embryo. Required for the proper development of the embryonic dorsal hypoderm, for viability of larvae and for cell viability of the epithelial cells in the imaginal disks. Acts together with scw.
Tribolium castaneum (taxid: 7070)
>sp|P91699|DECA_DROPS Protein decapentaplegic OS=Drosophila pseudoobscura pseudoobscura GN=dpp PE=2 SV=3 Back     alignment and function description
>sp|P07713|DECA_DROME Protein decapentaplegic OS=Drosophila melanogaster GN=dpp PE=1 SV=2 Back     alignment and function description
>sp|P91706|DECA_DROSI Protein decapentaplegic OS=Drosophila simulans GN=dpp PE=2 SV=1 Back     alignment and function description
>sp|P25703|BMP2A_XENLA Bone morphogenetic protein 2-A OS=Xenopus laevis GN=bmp2-a PE=2 SV=1 Back     alignment and function description
>sp|Q90752|BMP4_CHICK Bone morphogenetic protein 4 OS=Gallus gallus GN=BMP4 PE=2 SV=1 Back     alignment and function description
>sp|P30884|BMP2B_XENLA Bone morphogenetic protein 2-B OS=Xenopus laevis GN=bmp2-b PE=2 SV=1 Back     alignment and function description
>sp|P12644|BMP4_HUMAN Bone morphogenetic protein 4 OS=Homo sapiens GN=BMP4 PE=1 SV=1 Back     alignment and function description
>sp|P30885|BMP4_XENLA Bone morphogenetic protein 4 OS=Xenopus laevis GN=bmp4 PE=1 SV=1 Back     alignment and function description
>sp|P12643|BMP2_HUMAN Bone morphogenetic protein 2 OS=Homo sapiens GN=BMP2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query423
41349770395 decapentaplegic protein [Athalia rosae] 0.869 0.931 0.471 9e-98
332030426400 Protein decapentaplegic [Acromyrmex echi 0.891 0.942 0.459 2e-95
380023247390 PREDICTED: LOW QUALITY PROTEIN: protein 0.881 0.956 0.458 2e-94
157124686 527 decapentaplegic, deca [Aedes aegypti] gi 0.841 0.675 0.454 2e-92
58390081379 AGAP007987-PA [Anopheles gambiae str. PE 0.848 0.947 0.452 2e-92
383857990389 PREDICTED: protein decapentaplegic-like 0.884 0.961 0.453 3e-92
340727300390 PREDICTED: protein decapentaplegic-like 0.820 0.889 0.468 3e-92
242014254422 protein decapentaplegic precursor, putat 0.907 0.909 0.440 4e-92
307211424 547 Protein decapentaplegic [Harpegnathos sa 0.822 0.636 0.471 8e-92
170037137472 decapentaplegic [Culex quinquefasciatus] 0.853 0.764 0.443 9e-92
>gi|41349770|dbj|BAD08319.1| decapentaplegic protein [Athalia rosae] Back     alignment and taxonomy information
 Score =  363 bits (932), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 197/418 (47%), Positives = 262/418 (62%), Gaps = 50/418 (11%)

Query: 14  LNSITISTTSAEDSVQLD-------KKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAML 66
           L  +      A D+V+ +       ++A+  VE++LLSL G ++RPRP   +  +P+++ 
Sbjct: 18  LAGVCCCAAGAADTVEEEVVGAGDREQAIAGVEASLLSLLGFSKRPRPLGPS-HVPESLK 76

Query: 67  DLYKLQTGQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPD 126
            LY  Q+   +  + +  PG H RS+NTVR+F H  + ID++F+  ++FRL FD++S+P 
Sbjct: 77  KLYLRQSASGM--ADIARPGIHARSSNTVRSFAHVESKIDEKFQSPHRFRLSFDLSSVPL 134

Query: 127 TERVQSAELRLSRPM---NYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDST 183
            E + +AEL LSR     + EED+  + QRI+V DI+ PG++G SKP+LR+VDS LVD+ 
Sbjct: 135 QETLHAAELSLSRVALTESDEEDEASRYQRILVHDIVLPGVRGRSKPILRLVDSKLVDTK 194

Query: 184 SGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLE 243
           S  + V LDV PAV+RW ++P  N+GLL+EV         R     V ++R   E ++  
Sbjct: 195 SNSS-VPLDVHPAVERWIQNPSQNYGLLVEVMG-----AKRRKNEHVRLRRSAGE-DEES 247

Query: 244 WTSLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFAD 303
           WT+  P LF Y+DDGRN+  S E +L+R  R       +  +KN    C+RHPL      
Sbjct: 248 WTANRPFLFTYTDDGRNEMSSAEQILER--RARRATLRKNRRKNGRENCRRHPL------ 299

Query: 304 VGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNS 363
                                 YVDF DVGWNDWIVAPPGYDAF C GDCPFPLA+HLNS
Sbjct: 300 ----------------------YVDFVDVGWNDWIVAPPGYDAFYCHGDCPFPLADHLNS 337

Query: 364 TNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR 421
           TNHAIVQTL+ S  P  VPKACCVPTALS+ISMLYLDE+NKVVLK YQDMAV GCGCR
Sbjct: 338 TNHAIVQTLVYSTNPNIVPKACCVPTALSSISMLYLDEENKVVLKNYQDMAVLGCGCR 395

Source: Athalia rosae

Species: Athalia rosae

Genus: Athalia

Family: Tenthredinidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332030426|gb|EGI70114.1| Protein decapentaplegic [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380023247|ref|XP_003695436.1| PREDICTED: LOW QUALITY PROTEIN: protein decapentaplegic-like [Apis florea] Back     alignment and taxonomy information
>gi|157124686|ref|XP_001654153.1| decapentaplegic, deca [Aedes aegypti] gi|108882782|gb|EAT47007.1| AAEL001876-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|58390081|ref|XP_317480.2| AGAP007987-PA [Anopheles gambiae str. PEST] gi|46948812|gb|AAT07305.1| decapentaplegic [Anopheles gambiae] gi|55237694|gb|EAA12482.2| AGAP007987-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|383857990|ref|XP_003704486.1| PREDICTED: protein decapentaplegic-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340727300|ref|XP_003401984.1| PREDICTED: protein decapentaplegic-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|242014254|ref|XP_002427806.1| protein decapentaplegic precursor, putative [Pediculus humanus corporis] gi|212512275|gb|EEB15068.1| protein decapentaplegic precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307211424|gb|EFN87551.1| Protein decapentaplegic [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|170037137|ref|XP_001846416.1| decapentaplegic [Culex quinquefasciatus] gi|167880170|gb|EDS43553.1| decapentaplegic [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query423
FB|FBgn0000490588 dpp "decapentaplegic" [Drosoph 0.659 0.474 0.367 2e-91
UNIPROTKB|Q90752405 BMP4 "Bone morphogenetic prote 0.234 0.244 0.81 1.7e-80
UNIPROTKB|D2HR91395 BMP2 "Uncharacterized protein" 0.234 0.250 0.82 2.2e-80
UNIPROTKB|F7GUV7396 BMP2 "Bone morphogenetic prote 0.234 0.25 0.82 3.6e-80
UNIPROTKB|G7PGY1396 EGM_02315 "Bone morphogenetic 0.234 0.25 0.82 3.6e-80
UNIPROTKB|J9P401395 BMP2 "Uncharacterized protein" 0.234 0.250 0.82 1.5e-79
UNIPROTKB|G3RZN8396 BMP2 "Uncharacterized protein" 0.234 0.25 0.82 2.5e-79
UNIPROTKB|F7G4N4396 BMP2 "Uncharacterized protein" 0.234 0.25 0.82 5.2e-79
UNIPROTKB|G1RV31396 BMP2 "Uncharacterized protein" 0.234 0.25 0.82 5.2e-79
UNIPROTKB|G3TAW6395 BMP2 "Uncharacterized protein" 0.234 0.250 0.82 6.6e-79
FB|FBgn0000490 dpp "decapentaplegic" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 482 (174.7 bits), Expect = 2.0e-91, Sum P(3) = 2.0e-91
 Identities = 111/302 (36%), Positives = 175/302 (57%)

Query:    25 EDSVQLDKKALQQVESNLLSLFGLXXXXXXXXXXXXXXKAMLDLYKLQTGQDVDTSMLPL 84
             +D ++ D   L ++E +LLSLF +              + M  LY    G ++D+  +P 
Sbjct:   213 KDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPK 272

Query:    85 PGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYE 144
             PG  T+SANTVR+FTH+ + ID RF + ++FRLHFDV S+P  E++++AEL+L+R    +
Sbjct:   273 PGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSQ 332

Query:   145 E------DKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQ 198
             +        +    +++V DI + G++G  +P   ++D+  V   S +  VSLDV PAV 
Sbjct:   333 QVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDT-VSLDVQPAVD 391

Query:   199 RWTKSPEHNHGLLIEVTNRDGVLLDRNIRPL----VVMKRDQEEYNDLEWTSLEPILFLY 254
             RW  SP+ N+GLL+EV         R+++P     V ++R  +E ++  W   +P+LF Y
Sbjct:   392 RWLASPQRNYGLLVEVRTV------RSLKPAPHHHVRLRRSADEAHE-RWQHKQPLLFTY 444

Query:   255 SDDGRNKQKSLEDLLKRP---RRTPNDNAPRK--HKKNTYSICKRHPLYVDFADVGWNDW 309
             +DDGR+K +S+ D+       +   N   PR+   +KN    C+RH LYVDF+DVGW+DW
Sbjct:   445 TDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDW 504

Query:   310 IV 311
             IV
Sbjct:   505 IV 506
GO:0007352 "zygotic specification of dorsal/ventral axis" evidence=NAS;IMP
GO:0007458 "progression of morphogenetic furrow involved in compound eye morphogenesis" evidence=IMP;TAS
GO:0007498 "mesoderm development" evidence=IMP;TAS
GO:0007507 "heart development" evidence=IMP;TAS
GO:0030509 "BMP signaling pathway" evidence=NAS;TAS
GO:0007304 "chorion-containing eggshell formation" evidence=IMP
GO:0035224 "genital disc anterior/posterior pattern formation" evidence=IEP
GO:0007427 "epithelial cell migration, open tracheal system" evidence=IMP;TAS
GO:0035222 "wing disc pattern formation" evidence=IGI;IMP
GO:0042078 "germ-line stem cell division" evidence=IMP;TAS
GO:0030718 "germ-line stem cell maintenance" evidence=IMP
GO:0005160 "transforming growth factor beta receptor binding" evidence=ISS;NAS
GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=ISS;NAS
GO:0007391 "dorsal closure" evidence=NAS;TAS
GO:0007479 "leg disc proximal/distal pattern formation" evidence=NAS;TAS
GO:0007450 "dorsal/ventral pattern formation, imaginal disc" evidence=TAS
GO:0007442 "hindgut morphogenesis" evidence=IMP;TAS
GO:0007440 "foregut morphogenesis" evidence=TAS
GO:0001708 "cell fate specification" evidence=NAS;TAS
GO:0035156 "fusion cell fate specification" evidence=IMP
GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP;TAS
GO:0048100 "wing disc anterior/posterior pattern formation" evidence=TAS
GO:0016015 "morphogen activity" evidence=NAS;TAS
GO:0002168 "instar larval development" evidence=NAS
GO:0005576 "extracellular region" evidence=NAS
GO:0007444 "imaginal disc development" evidence=IMP;NAS;TAS
GO:0009790 "embryo development" evidence=NAS
GO:0007424 "open tracheal system development" evidence=NAS;TAS
GO:0046845 "branched duct epithelial cell fate determination, open tracheal system" evidence=TAS
GO:0007447 "imaginal disc pattern formation" evidence=NAS;TAS
GO:0007446 "imaginal disc growth" evidence=TAS
GO:0046843 "dorsal appendage formation" evidence=IMP
GO:0009950 "dorsal/ventral axis specification" evidence=NAS;IMP;TAS
GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP
GO:0030707 "ovarian follicle cell development" evidence=TAS
GO:0009948 "anterior/posterior axis specification" evidence=TAS
GO:0005615 "extracellular space" evidence=IDA
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP;TAS
GO:0005622 "intracellular" evidence=IDA
GO:0048477 "oogenesis" evidence=TAS
GO:0007354 "zygotic determination of anterior/posterior axis, embryo" evidence=TAS
GO:0035263 "genital disc sexually dimorphic development" evidence=IMP
GO:0046620 "regulation of organ growth" evidence=TAS
GO:0001709 "cell fate determination" evidence=TAS
GO:0007448 "anterior/posterior pattern specification, imaginal disc" evidence=NAS
GO:0019827 "stem cell maintenance" evidence=NAS
GO:0035215 "genital disc development" evidence=IMP;TAS
GO:0042127 "regulation of cell proliferation" evidence=NAS
GO:0007378 "amnioserosa formation" evidence=NAS;TAS
GO:0001715 "ectodermal cell fate specification" evidence=NAS
GO:0045705 "negative regulation of salivary gland boundary specification" evidence=TAS
GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP
GO:0007398 "ectoderm development" evidence=TAS
GO:0001745 "compound eye morphogenesis" evidence=IMP;TAS
GO:0035309 "wing and notum subfield formation" evidence=IMP
GO:0017145 "stem cell division" evidence=TAS
GO:0007393 "dorsal closure, leading edge cell fate determination" evidence=NAS
GO:0008285 "negative regulation of cell proliferation" evidence=TAS
GO:0007473 "wing disc proximal/distal pattern formation" evidence=TAS
GO:0045476 "nurse cell apoptotic process" evidence=NAS
GO:0048066 "developmental pigmentation" evidence=TAS
GO:0035147 "branch fusion, open tracheal system" evidence=TAS
GO:0007425 "epithelial cell fate determination, open tracheal system" evidence=TAS
GO:0008083 "growth factor activity" evidence=IEA
GO:0007423 "sensory organ development" evidence=TAS
GO:0010002 "cardioblast differentiation" evidence=IMP
GO:0048542 "lymph gland development" evidence=IMP
GO:0061320 "pericardial nephrocyte differentiation" evidence=IMP
GO:0046982 "protein heterodimerization activity" evidence=IPI
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0035217 "labial disc development" evidence=IMP
GO:0007281 "germ cell development" evidence=IMP
GO:0007313 "maternal specification of dorsal/ventral axis, oocyte, soma encoded" evidence=IMP
GO:0007455 "eye-antennal disc morphogenesis" evidence=IMP
GO:0061327 "anterior Malpighian tubule development" evidence=IMP
GO:0010629 "negative regulation of gene expression" evidence=IEP;IDA
GO:0045570 "regulation of imaginal disc growth" evidence=IMP
GO:0035214 "eye-antennal disc development" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0035168 "larval lymph gland hemocyte differentiation" evidence=IMP
GO:0007516 "hemocyte development" evidence=IMP
GO:0048636 "positive regulation of muscle organ development" evidence=IMP
GO:0008201 "heparin binding" evidence=IDA
GO:0045595 "regulation of cell differentiation" evidence=IMP
GO:0061353 "BMP signaling pathway involved in Malpighian tubule cell chemotaxis" evidence=IDA
GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP
GO:0005768 "endosome" evidence=IDA
GO:0005518 "collagen binding" evidence=IDA
UNIPROTKB|Q90752 BMP4 "Bone morphogenetic protein 4" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|D2HR91 BMP2 "Uncharacterized protein" [Ailuropoda melanoleuca (taxid:9646)] Back     alignment and assigned GO terms
UNIPROTKB|F7GUV7 BMP2 "Bone morphogenetic protein 2" [Macaca mulatta (taxid:9544)] Back     alignment and assigned GO terms
UNIPROTKB|G7PGY1 EGM_02315 "Bone morphogenetic protein 2" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
UNIPROTKB|J9P401 BMP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|G3RZN8 BMP2 "Uncharacterized protein" [Gorilla gorilla gorilla (taxid:9595)] Back     alignment and assigned GO terms
UNIPROTKB|F7G4N4 BMP2 "Uncharacterized protein" [Callithrix jacchus (taxid:9483)] Back     alignment and assigned GO terms
UNIPROTKB|G1RV31 BMP2 "Uncharacterized protein" [Nomascus leucogenys (taxid:61853)] Back     alignment and assigned GO terms
UNIPROTKB|G3TAW6 BMP2 "Uncharacterized protein" [Loxodonta africana (taxid:9785)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49001BMP2_RATNo assigned EC number0.42740.80370.8651yesN/A
O46576BMP4_RABITNo assigned EC number0.41700.81560.8435yesN/A
P21274BMP2_MOUSENo assigned EC number0.42340.80610.8654yesN/A
Q26974DECA_TRICANo assigned EC number0.41160.83680.9516yesN/A
P07713DECA_DROMENo assigned EC number0.41200.84630.6088yesN/A
P12644BMP4_HUMANNo assigned EC number0.42820.81560.8455yesN/A
Q90752BMP4_CHICKNo assigned EC number0.41300.88650.9259yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
smart00204102 smart00204, TGFB, Transforming growth factor-beta 7e-58
pfam00019105 pfam00019, TGF_beta, Transforming growth factor be 5e-52
pfam00688229 pfam00688, TGFb_propeptide, TGF-beta propeptide 7e-40
PHA02913172 PHA02913, PHA02913, TGF-beta-like protein; Provisi 3e-06
>gnl|CDD|214556 smart00204, TGFB, Transforming growth factor-beta (TGF-beta) family Back     alignment and domain information 
 Score =  184 bits (469), Expect = 7e-58
 Identities = 62/100 (62%), Positives = 78/100 (78%)

Query: 322 RHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETV 381
           R  LYVDF D+GW+DWI+AP GY+A+ C+G+CPFPL+  LN+TNHAIVQTL++ + P  V
Sbjct: 3   RRQLYVDFKDLGWDDWIIAPKGYNAYYCEGECPFPLSTSLNATNHAIVQTLVHLLGPNPV 62

Query: 382 PKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR 421
           PK CCVPT LS +SMLY D+D  VVL+ Y +M V  CGCR
Sbjct: 63  PKPCCVPTKLSPLSMLYYDDDGNVVLRNYPNMVVEECGCR 102

Family members are active as disulphide-linked homo- or heterodimers. TGFB is a multifunctional peptide that controls proliferation, differentiation, and other functions in many cell types. Length = 102
>gnl|CDD|215660 pfam00019, TGF_beta, Transforming growth factor beta like domain Back     alignment and domain information
>gnl|CDD|216062 pfam00688, TGFb_propeptide, TGF-beta propeptide Back     alignment and domain information
>gnl|CDD|177497 PHA02913, PHA02913, TGF-beta-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 423
KOG3900|consensus413 100.0
smart00204102 TGFB Transforming growth factor-beta (TGF-beta) fa 100.0
PF00019105 TGF_beta: Transforming growth factor beta like dom 100.0
PHA02913172 TGF-beta-like protein; Provisional 100.0
PF00688238 TGFb_propeptide: TGF-beta propeptide; InterPro: IP 99.98
PF06848182 Disaggr_repeat: Disaggregatase related repeat; Int 97.76
smart0004182 CT C-terminal cystine knot-like domain (CTCK). The 94.67
>KOG3900|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.3e-57  Score=464.55  Aligned_cols=369  Identities=34%  Similarity=0.494  Sum_probs=252.8

Q ss_pred             ccCcCCcchhhh-hHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCChHHHHHHHhhhcCCCCC-CC-----CCCCCccccc
Q psy16788         19 ISTTSAEDSVQL-DKKALQQVESNLLSLFGLNRRPRPNRKNVRIPKAMLDLYKLQTGQDVDT-SM-----LPLPGRHTRS   91 (423)
Q Consensus        19 ~~tcs~~d~~~~-~~~~le~ie~~IL~~LGL~~rP~p~~~~~~vP~~MldLY~~~~~~~~~~-~~-----~~~~~~~~~~   91 (423)
                      ..+|.+...... ++..++.++..||.+|.++.+|.+.+. ..+|.+|+++|+....+.++. ..     ..........
T Consensus        25 ~~~~~~~~~~~~~~~~~~e~~~~~~L~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (413)
T KOG3900|consen   25 LSLLERSLLSQLQRKSRLEALKRLILEKLPLPSAPLFNKP-SSAPLQLLDLLRAGRGEPEESDLERLNSRSEEDLELLAS  103 (413)
T ss_pred             cCccccccchhhhhhhHHHHHhhcchhcccccCccccccc-cccCHHhhhhhhhcccCCccccccccccccccccccccc
Confidence            344554443333 334889999999999999999987665 479999999999877554321 11     1111223456


Q ss_pred             cceeeeecccc---ccccccccccceEEEEEEccCCCCccceEEEEEEeecCCCCcc----CcccceEEEEEEeeecCCc
Q psy16788         92 ANTVRTFTHQV---TNIDKRFKYLNKFRLHFDVTSLPDTERVQSAELRLSRPMNYEE----DKHEQIQRIIVKDILQPGI  164 (423)
Q Consensus        92 AntVrSF~~~~---~~~~~~~~~~~~~~l~FnlSsIp~~e~V~~AELRLy~~~~~~~----~~~~~~~rV~VYqvl~p~~  164 (423)
                      ++++++|...+   ..+. .........+.|+++.++..+.+..||||+|+......    ..+.....+.+|++.....
T Consensus       104 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (413)
T KOG3900|consen  104 ANSVRSFVSLELSRLSLD-GNSELHFGDLLFDLRSIPSWEALPAAELRLYRRPVPDKLISAEANESLEELSPYDVLSSPL  182 (413)
T ss_pred             CCcceeeecccccceecC-CcccccchhhhcccccccchhhccccceeeecccccccccccccCcceeEEEeeeeccccc
Confidence            89999998753   1111 12233456788888889999999999999998776552    1222211188998765431


Q ss_pred             CCCCCCceeEEEEEEeeCCCCCCeEEEEcchhHHhhhcCCCCCceeEEEEEecCCccccCCCCCceeeeccccccccccc
Q psy16788        165 KGISKPVLRIVDSVLVDSTSGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQEEYNDLEW  244 (423)
Q Consensus       165 ~g~~~~~~rLLdsr~V~~~~sG~W~sFDVT~aV~~Wl~~~~~N~Gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (423)
                        .+.+..++++++.+....+| |++||||.+++.|...+..|+|+++++...+..........+..+.+.........|
T Consensus       183 --~~~~~~~~~~~~~~~~~~~~-W~~fdvt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (413)
T KOG3900|consen  183 --GRANDARLLSSRLVALRLSG-WIQFDVTSLVKRWALLSLSNLGLELQAEVVDRPLDPLLELSHLLLGRAGTPGALQLL  259 (413)
T ss_pred             --cCCCceeeccccceecCCCc-cEEeeHHHHHHHHHhcccccCceeEEEEeccccccccccccceeeeecCCccccchh
Confidence              23456789999999999999 999999999999999999999999999876654321102222333322200000012


Q ss_pred             ccccceEEEEecCCCccccc---hhh-hccCCC--CCCCCCCCCcCCCCCCCCceeeeeeeeecccCCchhhhhhhhhcc
Q psy16788        245 TSLEPILFLYSDDGRNKQKS---LED-LLKRPR--RTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKIL  318 (423)
Q Consensus       245 ~~~~p~L~~~~~~~~~~~~~---~~~-~~~R~r--R~~~~~~~~~~~~~~~~~c~~~~~~v~f~~~~~~~~~~~~~~~~~  318 (423)
                      ....|.......+.......   .+. ...+.+  +.................|||++|||||                 
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ccr~~lyV~F-----------------  322 (413)
T KOG3900|consen  260 LSAKPPASEKDPDLELSTLPSRRRELRLRPRQRHDRRRRRARRGRNCEGARNRCCRRPLYVDF-----------------  322 (413)
T ss_pred             hhhccccccccccccccccccccccccccccccccchhccccccccCCCCCCceeccceEeeh-----------------
Confidence            11111111111111000000   000 000000  0000000112233345689999999999                 


Q ss_pred             cccccccccccccCCCcceeecCCceeeeeecccCCCCCcCCCCCChhHHHHHHHhhcCCCCCCCCcccccccccEEEEE
Q psy16788        319 IPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLY  398 (423)
Q Consensus       319 ~~~~~~~~~~~~~~gw~~wi~~p~~~~~~~c~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~p~~~~~~~~~~  398 (423)
                                 ++|||+||||||+||+||||+|+||||++. +++||||+||+|+|.++|..+|+||||||+|++|+|||
T Consensus       323 -----------~~lGW~dWIIaP~gy~A~yC~G~C~~p~~~-~~~tnHa~vq~l~~~~~p~~~p~pCCvPtklsplsvLy  390 (413)
T KOG3900|consen  323 -----------RDLGWDDWIIAPKGYDANYCSGTCPFPLAD-HAATNHAIVQTLVHAVNPEPVPKPCCVPTKLSPLSVLY  390 (413)
T ss_pred             -----------hhcCCcceEeCCCcccCceecCcCCCchhh-cCCcchHHHHHHHHhhCCCCCCCCccccCccCceEEEE
Confidence                       999999999999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             EeCCCcEEEEEcCCeEEeceecc
Q psy16788        399 LDEDNKVVLKTYQDMAVTGCGCR  421 (423)
Q Consensus       399 ~~~~~~~~~~~~~~m~~~~c~c~  421 (423)
                      +|++++|++++|+||+|++|||+
T Consensus       391 ~d~~~~vv~k~y~nMvV~~CgC~  413 (413)
T KOG3900|consen  391 FDDNGNVVLKTYPNMVVESCGCR  413 (413)
T ss_pred             EeCCCcEEEEEecCcEEEecccC
Confidence            99999999999999999999997

>smart00204 TGFB Transforming growth factor-beta (TGF-beta) family Back     alignment and domain information
>PF00019 TGF_beta: Transforming growth factor beta like domain; InterPro: IPR001839 Transforming growth factor-beta (TGF-beta) is a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types Back     alignment and domain information
>PHA02913 TGF-beta-like protein; Provisional Back     alignment and domain information
>PF00688 TGFb_propeptide: TGF-beta propeptide; InterPro: IPR001111 The transforming growth factor beta, N terminus (TGFb) domain is present in a variety of proteins which include the transforming growth factor beta, decapentaplegic proteins and bone morphogenetic proteins Back     alignment and domain information
>PF06848 Disaggr_repeat: Disaggregatase related repeat; InterPro: IPR010671 This entry describes several repeats which seem to be specific to the Methanosarcina archaea species and are often found in multiple copies in disaggregatase proteins Back     alignment and domain information
>smart00041 CT C-terminal cystine knot-like domain (CTCK) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
1reu_A103 Structure Of The Bone Morphogenetic Protein 2 Mutan 2e-46
1es7_A116 Complex Between Bmp-2 And Two Bmp Receptor Ia Ectod 5e-46
3bmp_A114 Human Bone Morphogenetic Protein-2 (Bmp-2) Length = 6e-46
2h64_A114 Crystal Structure Of A Ternary Ligand-Receptor Comp 4e-45
3bk3_A114 Crystal Structure Of The Complex Of Bmp-2 And The F 2e-44
1m4u_L139 Crystal Structure Of Bone Morphogenetic Protein-7 ( 9e-35
2r53_A116 Crystal Structure Analysis Of Bone Morphogenetic Pr 3e-34
2qcw_A132 Crystal Structure Of Bone Morphogenetic Protein-6 ( 2e-33
3qb4_A117 Crystal Structure Of A Tgf-Beta Ligand-Receptor Com 2e-33
2r52_A143 Crystal Structure Analysis Of Bone Morphogenetic Pr 4e-33
1waq_A117 Crystal Structure Of Human Growth And Differentiati 9e-33
2bhk_A120 Crystal Structure Of Human Growth And Differentiati 1e-32
1zkz_A110 Crystal Structure Of Bmp9 Length = 110 1e-25
2qcq_A110 Crystal Structure Of Bone Morphogenetic Protein-3 ( 3e-25
1nys_B116 Crystal Structure Of Activin A Bound To The Ecd Of 4e-19
3hh2_A109 Crystal Structure Of The Myostatin:follistatin 288 6e-14
1tfg_A112 An Unusual Feature Revealed By The Crystal Structur 3e-11
1ktz_A112 Crystal Structure Of The Human Tgf-Beta Type Ii Rec 1e-09
3rjr_A363 Crystal Structure Of Pro-tgf Beta 1 Length = 363 2e-08
1kld_A112 Solution Structure Of Tgf-B1, Nmr, Models 18-33 Of 3e-08
>pdb|1REU|A Chain A, Structure Of The Bone Morphogenetic Protein 2 Mutant L51p Length = 103 Back     alignment and structure 
Iteration: 1

 Score =  183 bits (464), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/100 (81%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
Query: 322 RHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETV 381
           RHPLYVDF+DVGWNDWIVAPPGY AF C G+CPFP A+HLNSTNHAIVQTL+NSV  + +
Sbjct: 5   RHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPPADHLNSTNHAIVQTLVNSVNSK-I 63
Query: 382 PKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR 421
           PKACCVPT LSAISMLYLDE+ KVVLK YQDM V GCGCR
Sbjct: 64  PKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR 103
>pdb|1ES7|A Chain A, Complex Between Bmp-2 And Two Bmp Receptor Ia Ectodomains Length = 116 Back     alignment and structure
>pdb|3BMP|A Chain A, Human Bone Morphogenetic Protein-2 (Bmp-2) Length = 114 Back     alignment and structure
>pdb|2H64|A Chain A, Crystal Structure Of A Ternary Ligand-Receptor Complex Of Bmp-2 Length = 114 Back     alignment and structure
>pdb|3BK3|A Chain A, Crystal Structure Of The Complex Of Bmp-2 And The First Von Willebrand Domain Type C Of Crossveinless-2 Length = 114 Back     alignment and structure
>pdb|1M4U|L Chain L, Crystal Structure Of Bone Morphogenetic Protein-7 (bmp-7) In Complex With The Secreted Antagonist Noggin Length = 139 Back     alignment and structure
>pdb|2R53|A Chain A, Crystal Structure Analysis Of Bone Morphogenetic Protein-6 Variant B2 (b2-bmp-6) Length = 116 Back     alignment and structure
>pdb|2QCW|A Chain A, Crystal Structure Of Bone Morphogenetic Protein-6 (Bmp-6) Length = 132 Back     alignment and structure
>pdb|3QB4|A Chain A, Crystal Structure Of A Tgf-Beta Ligand-Receptor Complex Length = 117 Back     alignment and structure
>pdb|2R52|A Chain A, Crystal Structure Analysis Of Bone Morphogenetic Protein-6 (Bmp-6) Length = 143 Back     alignment and structure
>pdb|1WAQ|A Chain A, Crystal Structure Of Human Growth And Differentiation Factor 5 (Gdf-5) Length = 117 Back     alignment and structure
>pdb|2BHK|A Chain A, Crystal Structure Of Human Growth And Differentiation Factor 5 (Gdf5) Length = 120 Back     alignment and structure
>pdb|1ZKZ|A Chain A, Crystal Structure Of Bmp9 Length = 110 Back     alignment and structure
>pdb|2QCQ|A Chain A, Crystal Structure Of Bone Morphogenetic Protein-3 (Bmp-3) Length = 110 Back     alignment and structure
>pdb|1NYS|B Chain B, Crystal Structure Of Activin A Bound To The Ecd Of Actriib P41 Length = 116 Back     alignment and structure
>pdb|3HH2|A Chain A, Crystal Structure Of The Myostatin:follistatin 288 Complex Length = 109 Back     alignment and structure
>pdb|1TFG|A Chain A, An Unusual Feature Revealed By The Crystal Structure At 2.2 Angstroms Resolution Of Human Transforming Growth Factor-Beta2 Length = 112 Back     alignment and structure
>pdb|1KTZ|A Chain A, Crystal Structure Of The Human Tgf-Beta Type Ii Receptor Extracellular Domain In Complex With Tgf-Beta3 Length = 112 Back     alignment and structure
>pdb|3RJR|A Chain A, Crystal Structure Of Pro-tgf Beta 1 Length = 363 Back     alignment and structure
>pdb|1KLD|A Chain A, Solution Structure Of Tgf-B1, Nmr, Models 18-33 Of 33 Structures Length = 112 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query423
3rjr_A363 Transforming growth factor beta-1; TGF beta, activ 1e-67
1zkz_A110 Growth/differentiation factor 2; glycoprotein, gro 2e-54
2qcq_A110 Bone morphogenetic protein 3; BMP, TGF-beta, signa 3e-54
3evs_B117 Growth/differentiation factor 5; ligand-receptor c 5e-53
1lxi_A139 Bone morphogenetic protein 7; cystine-knot growth 2e-52
2h62_A114 BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-b 8e-52
2r52_A143 BMP-6, bone morphogenetic protein 6; TGF-beta liga 2e-51
2arp_A116 Inhibin beta A chain; cystine knot, disulfide rich 7e-48
2tgi_A112 Transforming growth factor ,beta 2; 1.80A {Homo sa 5e-44
3hh2_A109 Growth/differentiation factor 8; protein-protein c 2e-43
1agq_A135 GDNF, glial cell-derived neurotrophic factor; grow 4e-23
2ask_A113 Artemin; glial cell derived family ligand, neurotr 4e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
>3rjr_A Transforming growth factor beta-1; TGF beta, activation, integrin, cytokine; HET: NAG; 3.05A {Sus scrofa} Length = 363 Back     alignment and structure
 Score =  218 bits (555), Expect = 1e-67
 Identities = 79/415 (19%), Positives = 127/415 (30%), Gaps = 66/415 (15%)

Query: 18  TISTTSAEDSVQLDKKALQQVESNLLSLFGLNRRPRPNR-KNVRIPKAMLDLYKLQT--- 73
            +ST+   D   + +K ++ +   +LS   L   P         +P+A+L LY       
Sbjct: 2   PLSTSKTIDMELVKRKRIEAIRGQILSKLRLASPPSQGDVPPGPLPEAVLALYNSTRDRV 61

Query: 74  -GQDVDTSMLPLPGRHTRSANTVRTFTHQVTNIDKRFKYLNKFRLHFDVT----SLPDTE 128
            G+ V+    P    + +    V          DK     +   + F+ +    ++P+  
Sbjct: 62  AGESVEPEPEPEADYYAKEVTRVLMVESGNQIYDKFKGTPHSLYMLFNTSELREAVPEPV 121

Query: 129 RVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGISKPVLRIVDSVLVDSTSGENG 188
            +  AELRL R     E      Q + +                R + + L+  +     
Sbjct: 122 LLSRAELRLLRLKLKVE------QHVELYQKYSQ-------DSWRYLSNRLLAPSDSPEW 168

Query: 189 VSLDVLPAVQRWTKSPEHNHGLLIEVT---NRDGVLLDRNIRPLVVMKRDQEEYNDLEWT 245
           +S DV   V++W    E   G  +      +     L   I      +R           
Sbjct: 169 LSFDVTGVVRQWLTRREAIEGFRLSAHCSCDSKDNTLHVEINGFNSGRRGDLAT---IHG 225

Query: 246 SLEPILFLYSDDGRNKQKSLEDLLKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVG 305
              P L L +      Q           R            +T   C    LY+DF    
Sbjct: 226 MNRPFLLLMATPLERAQHL------HSSRHRRALDTNYCFSSTEKNCCVRQLYIDFRKDL 279

Query: 306 WNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTN 365
                                       W  WI  P GY A  C G CP+  +     T 
Sbjct: 280 G---------------------------WK-WIHEPKGYHANFCLGPCPYIWSLD---TQ 308

Query: 366 HAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGC 420
           ++ V  L N   P      CCVP AL  + ++Y        ++   +M V  C C
Sbjct: 309 YSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRK-PKVEQLSNMIVRSCKC 362
>1zkz_A Growth/differentiation factor 2; glycoprotein, growth factor, cytokine, hormone-growth factor; 2.33A {Homo sapiens} Length = 110 Back     alignment and structure
>2qcq_A Bone morphogenetic protein 3; BMP, TGF-beta, signaling protein; 2.21A {Homo sapiens} Length = 110 Back     alignment and structure
>3evs_B Growth/differentiation factor 5; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Homo sapiens} PDB: 1waq_A 3qb4_A 2bhk_A Length = 117 Back     alignment and structure
>1lxi_A Bone morphogenetic protein 7; cystine-knot growth factor, hormone-growth factor complex; HET: NAG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1lx5_A* 1bmp_A* 1m4u_L* 2qcw_A 2r53_A Length = 139 Back     alignment and structure
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A Length = 114 Back     alignment and structure
>2r52_A BMP-6, bone morphogenetic protein 6; TGF-beta ligand, chondrogenesis, cleavage on PAIR of basic residues, cytokine, developmental protein; 2.50A {Homo sapiens} Length = 143 Back     alignment and structure
>2arp_A Inhibin beta A chain; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1nyu_B 1nys_B 1s4y_B* 2arv_A* 2b0u_A 2p6a_A 3b4v_A* Length = 116 Back     alignment and structure
>2tgi_A Transforming growth factor ,beta 2; 1.80A {Homo sapiens} SCOP: g.17.1.2 PDB: 1tfg_A 1tgj_A 1ktz_A 1tgk_A 2pjy_A 3eo1_C 1kla_A 1klc_A 1kld_A 3kfd_A Length = 112 Back     alignment and structure
>3hh2_A Growth/differentiation factor 8; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Mus musculus} PDB: 3sek_B* Length = 109 Back     alignment and structure
>1agq_A GDNF, glial cell-derived neurotrophic factor; growth factor, cystine knot; 1.90A {Rattus norvegicus} SCOP: g.17.1.2 PDB: 3fub_B* 2v5e_B* Length = 135 Back     alignment and structure
>2ask_A Artemin; glial cell derived family ligand, neurotrphoic growth factor, sulfates, hormone/growth factor complex; 1.55A {Homo sapiens} PDB: 2gyz_A 2gyr_A 2gh0_C* Length = 113 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query423
3rjr_A363 Transforming growth factor beta-1; TGF beta, activ 100.0
3evs_B117 Growth/differentiation factor 5; ligand-receptor c 100.0
2h62_A114 BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-b 100.0
1zkz_A110 Growth/differentiation factor 2; glycoprotein, gro 100.0
2r52_A143 BMP-6, bone morphogenetic protein 6; TGF-beta liga 100.0
1lxi_A139 Bone morphogenetic protein 7; cystine-knot growth 100.0
2qcq_A110 Bone morphogenetic protein 3; BMP, TGF-beta, signa 100.0
2arp_A116 Inhibin beta A chain; cystine knot, disulfide rich 100.0
2tgi_A112 Transforming growth factor ,beta 2; 1.80A {Homo sa 100.0
3hh2_A109 Growth/differentiation factor 8; protein-protein c 100.0
2ask_A113 Artemin; glial cell derived family ligand, neurotr 99.97
1agq_A135 GDNF, glial cell-derived neurotrophic factor; grow 99.97
2k8p_A189 Sclerostin; WNT signalling pathway, bone formation 83.47
>3rjr_A Transforming growth factor beta-1; TGF beta, activation, integrin, cytokine; HET: NAG; 3.05A {Sus scrofa} Back     alignment and structure
Probab=100.00  E-value=9.4e-75  Score=583.57  Aligned_cols=348  Identities=24%  Similarity=0.353  Sum_probs=253.4

Q ss_pred             ccccCcCCcchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-CCCCCCChHHHHHHHhhhcCCCCCCCCCC-CCccccccce
Q psy16788         17 ITISTTSAEDSVQLDKKALQQVESNLLSLFGLNRRPRPN-RKNVRIPKAMLDLYKLQTGQDVDTSMLPL-PGRHTRSANT   94 (423)
Q Consensus        17 ~~~~tcs~~d~~~~~~~~le~ie~~IL~~LGL~~rP~p~-~~~~~vP~~MldLY~~~~~~~~~~~~~~~-~~~~~~~Ant   94 (423)
                      ++++||++.|++.+++++|++|+++||++|||+++|+|+ ..+..||++|++||+++.+...+...... .....+.|+.
T Consensus         1 ~~~~~~~~~d~~~~k~~~ieai~~~iLsklgL~~~P~~~~~~~~~vP~~ml~LYnst~~l~~~~~~~~~~~~e~~y~ake   80 (363)
T 3rjr_A            1 GPLSTSKTIDMELVKRKRIEAIRGQILSKLRLASPPSQGDVPPGPLPEAVLALYNSTRDRVAGESVEPEPEPEADYYAKE   80 (363)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCTTSSCCSCCCHHHHHHHHHHHSCCEEC-------CCCCSSCEE
T ss_pred             CCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhccccccCcCCcccceecee
Confidence            468999999999999999999999999999999999985 33478999999999998654321110000 0112334555


Q ss_pred             eeeecccc---ccccccccccceEEEEEEccCCCC----ccceEEEEEEeecCCCCccCcccceEEEEEEeeecCCcCCC
Q psy16788         95 VRTFTHQV---TNIDKRFKYLNKFRLHFDVTSLPD----TERVQSAELRLSRPMNYEEDKHEQIQRIIVKDILQPGIKGI  167 (423)
Q Consensus        95 VrSF~~~~---~~~~~~~~~~~~~~l~FnlSsIp~----~e~V~~AELRLy~~~~~~~~~~~~~~rV~VYqvl~p~~~g~  167 (423)
                      |++|....   +..+......+..+|+||+|+|+.    +|.|++||||||+....      ..++|+||+..  +    
T Consensus        81 v~~~~~~~~~~e~~~~~~~~~~~~~f~FnlS~ip~~~~~~e~l~~AELRlyk~~~~------~~~rI~vYq~~--~----  148 (363)
T 3rjr_A           81 VTRVLMVESGNQIYDKFKGTPHSLYMLFNTSELREAVPEPVLLSRAELRLLRLKLK------VEQHVELYQKY--S----  148 (363)
T ss_dssp             EEEEECCCSSTTTTTTTCCCTTEEEEEECHHHHHHHSSSTTTCCEEEEEEEBCCTT------CCEEEEEEEEC--S----
T ss_pred             eeeeccccccccccccccCCcceEEEEEECccCcccCCCcceeeeeEEEeEecCCC------ceEEEEEEecC--C----
Confidence            65553211   000111234467899999999975    67799999999987421      35899999842  1    


Q ss_pred             CCCceeEEEEEEeeCC-CCCCeEEEEcchhHHhhhcCCCCCceeEEEEEecCCccccCCCCCceeeeccc-c-ccccccc
Q psy16788        168 SKPVLRIVDSVLVDST-SGENGVSLDVLPAVQRWTKSPEHNHGLLIEVTNRDGVLLDRNIRPLVVMKRDQ-E-EYNDLEW  244 (423)
Q Consensus       168 ~~~~~rLLdsr~V~~~-~sG~W~sFDVT~aV~~Wl~~~~~N~Gl~i~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~  244 (423)
                       ....++||+|+|... .+| |++||||+||++|+.+++.|+||+|+|.+..+.   .....++++.+.. . .++...|
T Consensus       149 -~~~~rlLdsr~v~~~~~~g-W~sFDVt~aV~~Wl~~~~~n~GL~v~v~~~~~~---~~~~~~v~~~g~~~~~~~~~~~~  223 (363)
T 3rjr_A          149 -QDSWRYLSNRLLAPSDSPE-WLSFDVTGVVRQWLTRREAIEGFRLSAHCSCDS---KDNTLHVEINGFNSGRRGDLATI  223 (363)
T ss_dssp             -SSCEEEEEEEEECCCSSCC-EEEEECHHHHHHHHHCCCSCEEEEEEECEEEEE---ETTEEEEEECC-------CSBCC
T ss_pred             -CCceEEEEEEEecCCCCCC-EEEEECHHHHHHHHhCCCcCcceEEEEeecCCC---CCcccceeeccccccccCccccc
Confidence             235799999999987 788 999999999999999999999999999853211   0111233333322 0 1111112


Q ss_pred             -ccccceEEEEecCCCccccchhhh-ccCCCCCCCCCCCCcCCCCCCCCceeeeeeeeecccCCchhhhhhhhhcccccc
Q psy16788        245 -TSLEPILFLYSDDGRNKQKSLEDL-LKRPRRTPNDNAPRKHKKNTYSICKRHPLYVDFADVGWNDWIVENIRKILIPYR  322 (423)
Q Consensus       245 -~~~~p~L~~~~~~~~~~~~~~~~~-~~R~rR~~~~~~~~~~~~~~~~~c~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~  322 (423)
                       .+.+||||+|++++...    +.. .+|+||+....   ....+....|||+++||||                     
T Consensus       224 ~~~~~PfLv~~~~~~~~~----~~~~~~r~kr~~~~~---~c~~~~~~~Ccr~~~~VdF---------------------  275 (363)
T 3rjr_A          224 HGMNRPFLLLMATPLERA----QHLHSSRHRRALDTN---YCFSSTEKNCCVRQLYIDF---------------------  275 (363)
T ss_dssp             SSSSCSEEEEEECCHHHH----HC--------CBCTT---TTTTSCCCSSEEECCEEEH---------------------
T ss_pred             cccCCcEEEEEecccccc----ccccccccccccccc---cccccccCCccccceEEEe---------------------
Confidence             57899999999764311    011 13555543311   1122345689999999999                     


Q ss_pred             cccccccc-cCCCcceeecCCceeeeeecccCCCCCcCCCCCChhHHHHHHHhhcCCCCCCCCcccccccccEEEEEEeC
Q psy16788        323 HPLYVDFA-DVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETVPKACCVPTALSAISMLYLDE  401 (423)
Q Consensus       323 ~~~~~~~~-~~gw~~wi~~p~~~~~~~c~g~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~p~~~~~~~~~~~~~  401 (423)
                             + |||| +|||||+||+||||.|.||+|+.   ++||||+||+|++..+|+.+|+|||+||+|++|+|||+|+
T Consensus       276 -------~~dlGW-~WIiaP~gy~a~yC~G~C~~~~~---~~t~ha~v~~l~~~~~p~~~~~pCCvPt~l~~ls~ly~~~  344 (363)
T 3rjr_A          276 -------RKDLGW-KWIHEPKGYHANFCLGPCPYIWS---LDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVG  344 (363)
T ss_dssp             -------HHHHCC-CSEEECSEEECCEEESCCCCTTT---SCSCCHHHHHHTSSCCSSSSSSCCEEECSEEEEEEEEEET
T ss_pred             -------ecccCc-ceecCCCcccceEeeeeCCCCcc---CCCchHHHHHHHHhcCCCcCCCCccccccccceEEEEEeC
Confidence                   8 9999 79999999999999999999975   5899999999999999998999999999999999999998


Q ss_pred             CCcEEEEEcCCeEEeceecc
Q psy16788        402 DNKVVLKTYQDMAVTGCGCR  421 (423)
Q Consensus       402 ~~~~~~~~~~~m~~~~c~c~  421 (423)
                      +++ ++++|+||+|++|||.
T Consensus       345 ~~~-~~~~~~~Mvv~~CgCs  363 (363)
T 3rjr_A          345 RKP-KVEQLSNMIVRSCKCS  363 (363)
T ss_dssp             TEE-EEEEEEEEEECCEEEC
T ss_pred             Cee-EEEEcCCcEEEecccC
Confidence            765 5799999999999995
>3evs_B Growth/differentiation factor 5; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Homo sapiens} SCOP: g.17.1.0 PDB: 1waq_A 3qb4_A 2bhk_A Back     alignment and structure
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A Back     alignment and structure
>1zkz_A Growth/differentiation factor 2; glycoprotein, growth factor, cytokine, hormone-growth factor; 2.33A {Homo sapiens} Back     alignment and structure
>2r52_A BMP-6, bone morphogenetic protein 6; TGF-beta ligand, chondrogenesis, cleavage on PAIR of basic residues, cytokine, developmental protein; 2.50A {Homo sapiens} Back     alignment and structure
>1lxi_A Bone morphogenetic protein 7; cystine-knot growth factor, hormone-growth factor complex; HET: NAG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1lx5_A* 1bmp_A* 1m4u_L* 2qcw_A 2r53_A Back     alignment and structure
>2qcq_A Bone morphogenetic protein 3; BMP, TGF-beta, signaling protein; 2.21A {Homo sapiens} Back     alignment and structure
>2arp_A Inhibin beta A chain; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1nyu_B 1nys_B 1s4y_B* 2arv_A* 2b0u_A 2p6a_A 3b4v_A* Back     alignment and structure
>2tgi_A Transforming growth factor ,beta 2; 1.80A {Homo sapiens} SCOP: g.17.1.2 PDB: 1tfg_A 1tgj_A 1ktz_A 1tgk_A 2pjy_A 3eo1_C 1kla_A 1klc_A 1kld_A 3kfd_A Back     alignment and structure
>3hh2_A Growth/differentiation factor 8; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Mus musculus} SCOP: g.17.1.0 PDB: 3sek_B* Back     alignment and structure
>2ask_A Artemin; glial cell derived family ligand, neurotrphoic growth factor, sulfates, hormone/growth factor complex; 1.55A {Homo sapiens} PDB: 2gyz_A 2gyr_A 2gh0_C* Back     alignment and structure
>1agq_A GDNF, glial cell-derived neurotrophic factor; growth factor, cystine knot; 1.90A {Rattus norvegicus} SCOP: g.17.1.2 PDB: 3fub_B* 2v5e_B* Back     alignment and structure
>2k8p_A Sclerostin; WNT signalling pathway, bone formation, alternative splicing, glycoprotein, secreted, signaling protein; NMR {Homo sapiens} PDB: 2kd3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 423
d2h62a1103 g.17.1.2 (A:12-114) Bone morphogenetic protein-2 ( 1e-54
d1lxia_104 g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) 5e-52
d2arpa1116 g.17.1.2 (A:1-116) Activin A (Inhibin beta A) {Hum 5e-49
d2tgia_112 g.17.1.2 (A:) TGF-beta2 {Human (Homo sapiens) [Tax 4e-45
d1agqa_97 g.17.1.2 (A:) Glial cell-derived neurotrophic fact 1e-32
>d2h62a1 g.17.1.2 (A:12-114) Bone morphogenetic protein-2 (BMP-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 103 Back     information, alignment and structure

class: Small proteins
fold: Cystine-knot cytokines
superfamily: Cystine-knot cytokines
family: Transforming growth factor (TGF)-beta
domain: Bone morphogenetic protein-2 (BMP-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 1e-54
 Identities = 82/100 (82%), Positives = 89/100 (89%), Gaps = 1/100 (1%)

Query: 322 RHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIVQTLMNSVQPETV 381
           RHPLYVDF+DVGWNDWIVAPPGY AF C G+CPFPLA+HLNSTNHAIVQTL+NSV  + +
Sbjct: 5   RHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSK-I 63

Query: 382 PKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR 421
           PKACCVPT LSAISMLYLDE+ KVVLK YQDM V GCGCR
Sbjct: 64  PKACCVPTELSAISMLYLDENEKVVLKNYQDMVVEGCGCR 103
>d1lxia_ g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) {Human (Homo sapiens) [TaxId: 9606]} Length = 104 Back     information, alignment and structure
>d2arpa1 g.17.1.2 (A:1-116) Activin A (Inhibin beta A) {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d2tgia_ g.17.1.2 (A:) TGF-beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 112 Back     information, alignment and structure
>d1agqa_ g.17.1.2 (A:) Glial cell-derived neurotrophic factor, GDNF {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 97 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query423
d1lxia_104 Bone morphogenetic protein-7 (BMP-7) {Human (Homo 100.0
d2h62a1103 Bone morphogenetic protein-2 (BMP-2) {Human (Homo 100.0
d2arpa1116 Activin A (Inhibin beta A) {Human (Homo sapiens) [ 100.0
d2tgia_112 TGF-beta2 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1agqa_97 Glial cell-derived neurotrophic factor, GDNF {Rat 99.96
>d1lxia_ g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Small proteins
fold: Cystine-knot cytokines
superfamily: Cystine-knot cytokines
family: Transforming growth factor (TGF)-beta
domain: Bone morphogenetic protein-7 (BMP-7)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=287.21  Aligned_cols=104  Identities=58%  Similarity=1.231  Sum_probs=101.3

Q ss_pred             CCceeeeeeeeecccCCchhhhhhhhhcccccccccccccccCCCcceeecCCceeeeeecccCCCCCcCCCCCChhHHH
Q psy16788        290 SICKRHPLYVDFADVGWNDWIVENIRKILIPYRHPLYVDFADVGWNDWIVAPPGYDAFVCKGDCPFPLAEHLNSTNHAIV  369 (423)
Q Consensus       290 ~~c~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~wi~~p~~~~~~~c~g~c~~~~~~~~~~~~~~~~  369 (423)
                      +.|||+++||||                            +||||++|||||+||+||||.|.|++|+..++++||||++
T Consensus         1 ~~C~r~~~~V~F----------------------------~~lGW~~WIi~P~~y~a~~C~G~C~~p~~~~~~~~~ha~i   52 (104)
T d1lxia_           1 QACKKHELYVSF----------------------------RDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIV   52 (104)
T ss_dssp             CBSEEECCEEEH----------------------------HHHTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHH
T ss_pred             CCceeeeeEEEe----------------------------eecCCcceEEccCccccEECcCCCCCcccccCCCCchhhh
Confidence            369999999999                            9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCcccccccccEEEEEEeCCCcEEEEEcCCeEEeceecc
Q psy16788        370 QTLMNSVQPETVPKACCVPTALSAISMLYLDEDNKVVLKTYQDMAVTGCGCR  421 (423)
Q Consensus       370 ~~~~~~~~~~~~~~~cc~p~~~~~~~~~~~~~~~~~~~~~~~~m~~~~c~c~  421 (423)
                      |++++..+|..+++|||+||+|++|+|||+|++|++++++|+||+|++|||.
T Consensus        53 ~~~~~~~~~~~~~~pCC~Pt~~~~lsily~d~~~~i~~~~~~~Mvv~~CgC~  104 (104)
T d1lxia_          53 QTLVHFINPETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGCH  104 (104)
T ss_dssp             HHHHHHHCTTTCCCCCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEC
T ss_pred             hhhhhhcCCCCCCCCccccccccCEEEEEEeCCCcEEEEEcCCcEEEeeecC
Confidence            9999999999999999999999999999999999999999999999999995
>d2h62a1 g.17.1.2 (A:12-114) Bone morphogenetic protein-2 (BMP-2) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2arpa1 g.17.1.2 (A:1-116) Activin A (Inhibin beta A) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2tgia_ g.17.1.2 (A:) TGF-beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1agqa_ g.17.1.2 (A:) Glial cell-derived neurotrophic factor, GDNF {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure