Psyllid ID: psy16851

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSKVQKLEVGDSGH
Secondary Structure (PSIPRED)
cccEEEEccccccccccccEEcccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccccccEEEEEEEEccccHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEcccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccccccHHHHHHHccccccccccccccccccccEEEccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccEEEEccccEEcccccccccEEcccccccEEcccccccccccccccccHHHHHHHHHcccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEcHHHHHHHHHcccccccEEEEcHHHcccccccccccEEEcHHHccccccccccccccEEEcHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccHHcEEEEEcccHHHHHHHHHHHHcccccccccEEEEEEccccccEEEEccHHHHHHHHEEEEEccccc
Coil and Loop (DISEMBL)
MLEALMVTNFSIVTVpavetkkftstkalvleditRESVVQKVLpvqknkyldknkgiktedlyvagfnipcvdlcpklgdGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGigsdsgnqivseesnlygdiiqgnfvdsydnlTLKTVAMMEWIHdycpdthfilktdddmfinVPKLLTFLVKHQNSKMTFFGRLakkwrpirkssskyyvspvqyspnmfpdfttgpaylftsdVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFfnkriplnactikkgISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSkvqklevgdsgh
Flexible Loop (DISEMBL)
mlealmvtnfsivtvpavetkkftstkalvleditresvvqkvlpvqknkyldknkgikTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKhqnskmtffgrlakkwrpirkssskyyVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVneffnkriplnaCTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGEtllskvqklevgdsgh
Low Complexity Region (SEG)
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPklgdglkililiTSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSKVQKLEVGDSGH
Disordered region (IsUnstruct)
****LMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGET***************
Disordered Region (DISOPRED)
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRE********************IKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDS****VSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGE*********EV*****
Disordered Region (DISEMBL)
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSKVQKLEVGDSGH
Disordered Region (DISPRO)
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSKVQKLEVG****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLEALMVTNFSIVTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSKYIDVIHYVQKTSESFDHFYRSGGETLLSKVQKLEVGDSGH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q9Y2C3	310	Beta-1,3-galactosyltransf	yes	N/A	0.658	0.777	0.358	1e-39
Q9N294	301	Beta-1,3-galactosyltransf	N/A	N/A	0.642	0.780	0.363	6e-39
Q9N293	298	Beta-1,3-galactosyltransf	N/A	N/A	0.636	0.781	0.362	3e-38
Q9N295	297	Beta-1,3-galactosyltransf	yes	N/A	0.636	0.784	0.362	3e-38
Q9JI67	308	Beta-1,3-galactosyltransf	yes	N/A	0.655	0.779	0.345	5e-36
Q9MYM7	326	Beta-1,3-galactosyltransf	N/A	N/A	0.642	0.720	0.333	8e-33
Q7JK26	326	Beta-1,3-galactosyltransf	no	N/A	0.642	0.720	0.333	8e-33
Q7JK25	326	Beta-1,3-galactosyltransf	N/A	N/A	0.642	0.720	0.333	8e-33
O54904	326	Beta-1,3-galactosyltransf	no	N/A	0.642	0.720	0.333	8e-33
Q9Y5Z6	326	Beta-1,3-galactosyltransf	no	N/A	0.642	0.720	0.333	8e-33

>sp|Q9Y2C3|B3GT5_HUMAN Beta-1,3-galactosyltransferase 5 OS=Homo sapiens GN=B3GALT5 PE=1 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 139/248 (56%), Gaps = 7/248 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGN-QIVSEESNLYGD 141
           +++L+TS+      R AIRQTWG   +     +   F++G  S +   + V +ES  +GD
Sbjct: 59  LVLLVTSSHKQLAERMAIRQTWGKERMVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGD 118

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKM 201
           IIQ +F+D Y NLTLKT+  +EW+H +CP   F++KTD DMFINV  L   L+K   +  
Sbjct: 119 IIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR 178

Query: 202 TFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTY 261
            F G L     PIR+  SK++VS  +Y  + +P F +G  Y+F+ DV S VY  +    Y
Sbjct: 179 FFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPY 238

Query: 262 LKLEDVFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWK 318
           +KLEDVF  G+  + L I+ + ++    FF   +  + C  ++ ++ H IK     + W+
Sbjct: 239 IKLEDVF-VGLCLERLNIRLEELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQ 297

Query: 319 KLLDGRSK 326
            L + R +
Sbjct: 298 ALENSRGE 305

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9N294|B3GT5_PANPA Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan paniscus GN=B3GALT5 PE=3 SV=1

 Score =  161 bits (408), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/242 (36%), Positives = 135/242 (55%), Gaps = 7/242 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGN-QIVSEESNLYGD 141
           +++L+TS+      R AIRQTWG         +   F++G  S +   + V +ES  +GD
Sbjct: 59  LVLLVTSSHKQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGD 118

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKM 201
           IIQ +F+D Y NLTLKT+  +EW+H +CP   F++KTD DMFINV  L   L+K   +  
Sbjct: 119 IIQKDFLDGYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR 178

Query: 202 TFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTY 261
            F G L     PIR+  SK++VS  +Y  + +P F +G  Y+F+ DV S VY  +    Y
Sbjct: 179 FFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSESVPY 238

Query: 262 LKLEDVFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWK 318
           +KLEDVF  G+  + L I+ + ++    FF   +  + C  ++ ++ H IK     + W+
Sbjct: 239 IKLEDVF-VGLCLERLNIRLEELHSQPTFFPGGLRFSVCRFRRIVACHFIKPRTLLDYWQ 297

Query: 319 KL 320
            L
Sbjct: 298 AL 299

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.

Pan paniscus (taxid: 9597)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9N293|B3GT5_GORGO Beta-1,3-galactosyltransferase 5 (Fragment) OS=Gorilla gorilla gorilla GN=B3GALT5 PE=3 SV=2

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 134/240 (55%), Gaps = 7/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGN-QIVSEESNLYGD 141
           +++L+TS+      R AIRQTWG         +   F++G  S +   + V +ES  +GD
Sbjct: 59  LVLLVTSSHKQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSSAAETKEVDQESRRHGD 118

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKM 201
           IIQ +F+D Y NLTLKT+  +EW+H +CP   F++KTD DMFINV  L   L+K   +  
Sbjct: 119 IIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR 178

Query: 202 TFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTY 261
            F G L     PIR+  SK++VS  +Y  + +P F +G  Y+F+ DV S VY  +    Y
Sbjct: 179 FFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSESVPY 238

Query: 262 LKLEDVFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWK 318
           +KLEDVF  G+  + L I+ + ++    FF   +  + C  ++ ++ H IK     + W+
Sbjct: 239 IKLEDVF-VGLCLERLNIRLEELHSQPTFFPGGLRFSVCRFRRIVACHFIKPRTLLDYWQ 297

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9N295|B3GT5_PANTR Beta-1,3-galactosyltransferase 5 (Fragment) OS=Pan troglodytes GN=B3GALT5 PE=3 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 134/240 (55%), Gaps = 7/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSG-NQIVSEESNLYGD 141
           +++L+TS+      R AIRQTWG         +   F++G  S +   + V +ES  +GD
Sbjct: 59  LVLLVTSSHRQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGD 118

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKM 201
           IIQ +F+D Y NLTLKT+  +EW+H +CP   F++KTD DMFINV  L   L+K   +  
Sbjct: 119 IIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTR 178

Query: 202 TFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTY 261
            F G L     PIR+  SK++VS  +Y  + +P F +G  Y+F+ DV S VY  +    Y
Sbjct: 179 FFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSESVPY 238

Query: 262 LKLEDVFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWK 318
           +KLEDVF  G+  + L I+ + ++    FF   +  + C  ++ ++ H IK     + W+
Sbjct: 239 IKLEDVF-VGLCLERLNIRLEELHSQPTFFPGGLRFSVCRFRRIVACHFIKPRTLLDYWQ 297

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9JI67|B3GT5_MOUSE Beta-1,3-galactosyltransferase 5 OS=Mus musculus GN=B3galt5 PE=2 SV=1

 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 140/249 (56%), Gaps = 9/249 (3%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYN--LRNDVAIAFVVGIGSDSGNQI--VSEESNLYG 140
           +++L+TS+     AR AIR+TWG         V   F++G  SDS  ++   + ES  + 
Sbjct: 57  LVLLVTSSHKQLAARMAIRKTWGRETSVQGQQVRTFFLLGT-SDSTEEMDATTLESEQHR 115

Query: 141 DIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSK 200
           DIIQ +F D+Y NLTLKT+  MEW++ +CP T +++KTD DMF+NV  L   L+K   + 
Sbjct: 116 DIIQKDFKDAYFNLTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTT 175

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             F G +     PIR+  +K++VS  +Y  + +P F +G  Y+F+SDV   VY  +    
Sbjct: 176 RFFTGYIKPHDFPIRQKFNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVP 235

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVN---EFFNKRIPLNACTIKKGISIHMIKYHEQFELW 317
           ++KLEDVF  G+    LKI+ + ++    FF   +  + C  +K ++ H +K  +    W
Sbjct: 236 FIKLEDVF-VGLCLAKLKIRPEELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYW 294

Query: 318 KKLLDGRSK 326
           + L + + +
Sbjct: 295 QALENSKEQ 303

Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor. Also catalyzes the transfer of Gal to the terminal GalNAc unit of the globoside GB4, thereby synthesizing the glycolipid GB5, also known as the stage-specific embryonic antigen-3 (SSEA-3).

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MYM7|B3GT1_PONPY Beta-1,3-galactosyltransferase 1 OS=Pongo pygmaeus GN=B3GALT1 PE=3 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGD 141
           ++ILI++     +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ D
Sbjct: 80  LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHD 139

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK 200
           II  +F+DSY NLTLKT+  M W+  +C    +++KTD D+F+N+  L+  L+K     +
Sbjct: 140 IIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             +F        PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T 
Sbjct: 200 RRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTR 259

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
            L LEDV+  G+  + L I     + F + ++  + C  ++ I++H I   E   +W  +
Sbjct: 260 LLHLEDVY-VGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK26|B3GT1_PANTR Beta-1,3-galactosyltransferase 1 OS=Pan troglodytes GN=B3GALT1 PE=3 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGD 141
           ++ILI++     +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ D
Sbjct: 80  LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHD 139

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK 200
           II  +F+DSY NLTLKT+  M W+  +C    +++KTD D+F+N+  L+  L+K     +
Sbjct: 140 IIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             +F        PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T 
Sbjct: 200 RRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTR 259

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
            L LEDV+  G+  + L I     + F + ++  + C  ++ I++H I   E   +W  +
Sbjct: 260 LLHLEDVY-VGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q7JK25|B3GT1_PANPA Beta-1,3-galactosyltransferase 1 OS=Pan paniscus GN=B3GALT1 PE=3 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGD 141
           ++ILI++     +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ D
Sbjct: 80  LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHD 139

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK 200
           II  +F+DSY NLTLKT+  M W+  +C    +++KTD D+F+N+  L+  L+K     +
Sbjct: 140 IIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             +F        PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T 
Sbjct: 200 RRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTR 259

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
            L LEDV+  G+  + L I     + F + ++  + C  ++ I++H I   E   +W  +
Sbjct: 260 LLHLEDVY-VGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Pan paniscus (taxid: 9597)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|O54904|B3GT1_MOUSE Beta-1,3-galactosyltransferase 1 OS=Mus musculus GN=B3galt1 PE=2 SV=2

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGD 141
           ++ILI++     +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ D
Sbjct: 80  LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHD 139

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK 200
           II  +F+DSY NLTLKT+  M W+  +C    +++KTD D+F+N+  L+  L+K     +
Sbjct: 140 IIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             +F        PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T 
Sbjct: 200 RRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTR 259

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
            L LEDV+  G+  + L I     + F + ++  + C  ++ I++H I   E   +W  +
Sbjct: 260 LLHLEDVY-VGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9Y5Z6|B3GT1_HUMAN Beta-1,3-galactosyltransferase 1 OS=Homo sapiens GN=B3GALT1 PE=2 SV=1

 Score =  141 bits (355), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 85  ILILITSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGD 141
           ++ILI++     +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ D
Sbjct: 80  LVILISTTHKEFDARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHD 139

Query: 142 IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK 200
           II  +F+DSY NLTLKT+  M W+  +C    +++KTD D+F+N+  L+  L+K     +
Sbjct: 140 IIVEDFIDSYHNLTLKTLMGMRWVATFCSKAKYVMKTDSDIFVNMDNLIYKLLKPSTKPR 199

Query: 201 MTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT 260
             +F        PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T 
Sbjct: 200 RRYFTGYVINGGPIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTR 259

Query: 261 YLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
            L LEDV+  G+  + L I     + F + ++  + C  ++ I++H I   E   +W  +
Sbjct: 260 LLHLEDVY-VGLCLRKLGIHPFQNSGFNHWKMAYSLCRYRRVITVHQISPEEMHRIWNDM 318

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
242004990	424	beta-1,3-galactosyltransferase, putative	0.781	0.674	0.573	3e-95
195438487	594	GK24845 [Drosophila willistoni] gi|19416	0.748	0.461	0.573	6e-92
307195716	478	UDP-GlcNAc:betaGal beta-1,3-N-acetylgluc	0.721	0.552	0.566	1e-91
195035555	614	GH11617 [Drosophila grimshawi] gi|193905	0.830	0.495	0.522	8e-91
194759069	621	GF14760 [Drosophila ananassae] gi|190615	0.762	0.449	0.556	1e-90
195577466	587	GD23505 [Drosophila simulans] gi|1941906	0.748	0.466	0.566	1e-90
91082655	378	PREDICTED: similar to GA21248-PA isoform	0.748	0.724	0.567	1e-90
195339094	587	GM16754 [Drosophila sechellia] gi|194130	0.748	0.466	0.566	2e-90
270015051	383	hypothetical protein TcasGA2_TC014213 [T	0.748	0.715	0.567	2e-90
195388018	621	GJ17692 [Drosophila virilis] gi|19414914	0.759	0.447	0.559	3e-90

>gi|242004990|ref|XP_002423358.1| beta-1,3-galactosyltransferase, putative [Pediculus humanus corporis] gi|212506388|gb|EEB10620.1| beta-1,3-galactosyltransferase, putative [Pediculus humanus corporis]

 Score =  355 bits (910), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 167/291 (57%), Positives = 212/291 (72%), Gaps = 5/291 (1%)

Query: 36  RESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDH 95
           + SV+QKV P  +N       GI T  LY +GF +P VDLCP  G  LK++ILITSA +H
Sbjct: 138 QSSVIQKVPPKSENV-----TGIATRSLYDSGFRVPNVDLCPDFGQHLKLIILITSAPNH 192

Query: 96  SEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLT 155
            EAR AIRQTWGH+ +R DV++AFV+G         + +E++LY DII G+F+DSY+NLT
Sbjct: 193 VEARKAIRQTWGHFRMRKDVSMAFVLGRSLKGNESYIKDENSLYEDIILGSFIDSYNNLT 252

Query: 156 LKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIR 215
           LKT +M+EW+ +YC    F+LKTDDDMFIN+PK   F+ KH N K   FG+LA KW+PIR
Sbjct: 253 LKTTSMLEWVDNYCNKAKFVLKTDDDMFINIPKKKDFIGKHGNDKRKIFGKLASKWKPIR 312

Query: 216 KSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQ 275
           K +SKYYVS  QY  ++FP FTTGPAYL TSDV+ D+YT AL  TYLKLEDVF TG+VAQ
Sbjct: 313 KKASKYYVSLQQYKHSIFPSFTTGPAYLITSDVIHDLYTTALNMTYLKLEDVFMTGIVAQ 372

Query: 276 SLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
              I+R HV EF N+R+ + +C I K ISIHM+K  EQ++LWK+LLDGR+K
Sbjct: 373 EKGIRRVHVPEFLNRRLSVTSCYIHKAISIHMVKPFEQYDLWKRLLDGRTK 423

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195438487|ref|XP_002067168.1| GK24845 [Drosophila willistoni] gi|194163253|gb|EDW78154.1| GK24845 [Drosophila willistoni]

 Score =  343 bits (881), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 160/279 (57%), Positives = 213/279 (76%), Gaps = 5/279 (1%)

Query: 52  LDKNKGIKTEDLYVAGF---NIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGH 108
           +D +KGI TE +Y +G     I    +CP+ G+  K+LILITSA  H+EAR +IRQTWGH
Sbjct: 315 VDPSKGIATEKIYESGHLDDEIDVERICPQEGEYTKLLILITSAQSHAEARMSIRQTWGH 374

Query: 109 YNLRNDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHD 167
           Y  R D+ +AF++G G+ D+ N+ +++E+ +YGD+I+G+F+DSY+NLTLKT++ +EW   
Sbjct: 375 YGTRRDIGMAFILGRGTNDTINKALTQENYMYGDLIRGSFIDSYNNLTLKTLSSLEWADR 434

Query: 168 YCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQ 227
           +C    +ILKTDDDMFINVPKLL FL +H++ K   +GRLAKKW+PIR   SKYYVS  Q
Sbjct: 435 HCSRAKYILKTDDDMFINVPKLLKFLDQHKD-KRVIYGRLAKKWKPIRNKKSKYYVSTDQ 493

Query: 228 YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEF 287
           +S ++FP FTTGPAY+ TSD+V D+Y ++L+T YLKLEDVFTTG+VAQSL IKR H NEF
Sbjct: 494 FSASVFPSFTTGPAYVLTSDIVHDLYQRSLQTVYLKLEDVFTTGIVAQSLGIKRVHANEF 553

Query: 288 FNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
            N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct: 554 VNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 592

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195716|gb|EFN77556.1| UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Harpegnathos saltator]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 150/265 (56%), Positives = 196/265 (73%), Gaps = 1/265 (0%)

Query: 63  LYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVG 122
           +Y  G  +P  + CP LG  + +++++ SA  H +AR+AIRQTWGHY  R+D+++ F++G
Sbjct: 212 IYETGHTVPIPERCPNLGKDMDLVVIVMSAPTHLDARTAIRQTWGHYGQRSDMSVLFMLG 271

Query: 123 IGSDSG-NQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDD 181
             +D     I+ +E N+Y DII+G F+DSY NLTLKT++ +EW+  YCP   ++LKTDDD
Sbjct: 272 TTNDRKVETILRKEQNMYNDIIRGRFLDSYSNLTLKTISTLEWVGSYCPKVKYLLKTDDD 331

Query: 182 MFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPA 241
           MFINVP+LL F+ KH   +   FGRLA+KW+PIR   SKYYVS  Q+  ++FPDFTTGPA
Sbjct: 332 MFINVPRLLAFVSKHARDRNVIFGRLARKWKPIRNRKSKYYVSQAQFQQSIFPDFTTGPA 391

Query: 242 YLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKK 301
           YL +SD V  +Y  AL+ TYLKLEDVF TG+VA  L IKR H NEF NKRIP  AC I++
Sbjct: 392 YLLSSDTVRRLYDAALDHTYLKLEDVFMTGIVAHKLGIKRSHANEFLNKRIPYTACNIQR 451

Query: 302 GISIHMIKYHEQFELWKKLLDGRSK 326
           GISIHM+KY EQF+LWKKLLDG+SK
Sbjct: 452 GISIHMVKYSEQFDLWKKLLDGKSK 476

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195035555|ref|XP_001989243.1| GH11617 [Drosophila grimshawi] gi|193905243|gb|EDW04110.1| GH11617 [Drosophila grimshawi]

 Score =  340 bits (871), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 166/318 (52%), Positives = 218/318 (68%), Gaps = 14/318 (4%)

Query: 13  VTVPAVETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGF---N 69
           V +PA E +K  S  A         + V K     K   LD +KGI  E +Y +G     
Sbjct: 305 VKMPAEENEKPQSPPA---------AKVPKAKSTNKATSLDPSKGIAAEQIYESGHLNDE 355

Query: 70  IPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSG- 128
           I    +CP  G   ++LILITSA  H++AR +IRQTWGHY  R D+++AFV+G G++   
Sbjct: 356 ISIERICPANGLSTRLLILITSAQTHADARMSIRQTWGHYGTRRDISMAFVLGRGTNETV 415

Query: 129 NQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPK 188
           N+ +S+E+ +YGD+I+GNF+DSY+NLTLKT++ +EWI  +CP   +ILKTDDDMFINVPK
Sbjct: 416 NEALSQENFMYGDLIRGNFIDSYNNLTLKTISSLEWIDQHCPRAQYILKTDDDMFINVPK 475

Query: 189 LLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDV 248
           LL FL K +  K   +GRLAKKW+P+R   SKYYV+  Q+   +FP FTTGPAY+ T  +
Sbjct: 476 LLKFLDKRK-EKRAIYGRLAKKWKPVRNKKSKYYVATDQFPAAVFPSFTTGPAYVMTGSI 534

Query: 249 VSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMI 308
           V D+Y ++L T YLKLEDVF TG+VAQSL I+R HVNEF N+RI  N C I+  IS+HMI
Sbjct: 535 VHDLYVRSLTTVYLKLEDVFATGIVAQSLGIERLHVNEFVNRRISFNPCNIRNAISVHMI 594

Query: 309 KYHEQFELWKKLLDGRSK 326
           K +EQF+LWKKLLD  +K
Sbjct: 595 KSNEQFDLWKKLLDQTTK 612

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194759069|ref|XP_001961772.1| GF14760 [Drosophila ananassae] gi|190615469|gb|EDV30993.1| GF14760 [Drosophila ananassae]

 Score =  339 bits (870), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/284 (55%), Positives = 211/284 (74%), Gaps = 5/284 (1%)

Query: 47  QKNKYLDKNKGIKTEDLYVAGF---NIPCVDLCPKLGDGLKILILITSALDHSEARSAIR 103
           Q    +D +KG+ TE LY  G     I    +CPK G  +K+L+LI+SA+ H  AR +IR
Sbjct: 337 QPGAPVDPSKGVPTEQLYEPGHLDDEIDAERICPKEGKFIKLLVLISSAMSHEAARMSIR 396

Query: 104 QTWGHYNLRNDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMM 162
           QTW HY  R DV +AFV+G G+ D+ N+ +++E+ +YGD+I+GNF+DSY+NLTLKT++ +
Sbjct: 397 QTWMHYGTRRDVGMAFVLGRGNNDTLNKALTQENFIYGDLIRGNFIDSYNNLTLKTISTL 456

Query: 163 EWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYY 222
           EW + +CP   ++LKTDDDMFINVPKLL FL KH++ K T +GRLAKKW+PIR   SKYY
Sbjct: 457 EWAYLHCPQAKYVLKTDDDMFINVPKLLAFLDKHKD-KRTIYGRLAKKWKPIRNKKSKYY 515

Query: 223 VSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ 282
           VS  Q++  +FP FTTGPAY+ T D+V ++Y ++L+T YLKLEDVFTTG+VAQ+L IKR 
Sbjct: 516 VSVDQFAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVAQALGIKRL 575

Query: 283 HVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
             NEF N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct: 576 QANEFVNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 619

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195577466|ref|XP_002078591.1| GD23505 [Drosophila simulans] gi|194190600|gb|EDX04176.1| GD23505 [Drosophila simulans]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 158/279 (56%), Positives = 211/279 (75%), Gaps = 5/279 (1%)

Query: 52  LDKNKGIKTEDLYVAGF---NIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGH 108
           +D +KG+ TE LY  G     I    +CPK G+ +K+L+LI+SA+ H  AR +IRQTW H
Sbjct: 308 VDPSKGVATETLYEPGHVDEEIDAERICPKGGEFIKLLVLISSAMSHDAARMSIRQTWMH 367

Query: 109 YNLRNDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHD 167
           Y  R DV +AFV+G G+ D+ N+ +++E+ +YGD+I+GNF+DSY+NLTLKT++ +EW   
Sbjct: 368 YGTRRDVGMAFVLGRGTNDTINKALTQENFIYGDLIRGNFIDSYNNLTLKTISTLEWADV 427

Query: 168 YCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQ 227
           +CP   +ILKTDDDMFINVPKLLTFL KH++ K T +GRLAKKW+PIR   SKYYVS  Q
Sbjct: 428 HCPKAKYILKTDDDMFINVPKLLTFLDKHKD-KRTIYGRLAKKWKPIRNKKSKYYVSVDQ 486

Query: 228 YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEF 287
           ++  +FP FTTGPAY+ T D+V ++Y ++L+T YLKLEDVFTTG+VA+SL +KR   NEF
Sbjct: 487 FAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVAKSLNVKRVQANEF 546

Query: 288 FNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
            N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct: 547 VNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 585

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082655|ref|XP_966323.1| PREDICTED: similar to GA21248-PA isoform 1 [Tribolium castaneum] gi|91082657|ref|XP_975780.1| PREDICTED: similar to GA21248-PA isoform 2 [Tribolium castaneum]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 156/275 (56%), Positives = 199/275 (72%), Gaps = 1/275 (0%)

Query: 53  DKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLR 112
           D  +G+  E +Y AG       +CP+LG  LK+LI ITSA  H  AR AIR+TWGH+  R
Sbjct: 101 DLTRGVAAEIIYEAGHVDVSSQICPELGRDLKLLIAITSAPSHESARMAIRETWGHFASR 160

Query: 113 NDVAIAFVVG-IGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPD 171
            DVAIAF++G I +++ N  + +E  LYGDII+G F D+YDNLTLKT++M+EW+ +YCP 
Sbjct: 161 KDVAIAFMLGSISNETVNANIEKEQYLYGDIIRGKFRDTYDNLTLKTISMLEWVDNYCPK 220

Query: 172 THFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPN 231
             F+LKTDDDMFINV +LL F+ KH   + T +GRLAKKW+PIR   SKYY+SP QY P 
Sbjct: 221 AAFVLKTDDDMFINVSRLLAFIAKHSPEQRTIYGRLAKKWKPIRNKKSKYYISPNQYKPA 280

Query: 232 MFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKR 291
           +FPDFTTGPAYL  + +  ++Y  AL  TY KLEDVF TG+VA SLKIKR H  EF NKR
Sbjct: 281 VFPDFTTGPAYLLPARLSKELYVAALNHTYFKLEDVFVTGIVANSLKIKRVHAPEFLNKR 340

Query: 292 IPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
           + L  C+++KGISIHM+K  EQ++LWKKL D  +K
Sbjct: 341 VSLTPCSVQKGISIHMVKGVEQYDLWKKLHDVAAK 375

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195339094|ref|XP_002036156.1| GM16754 [Drosophila sechellia] gi|194130036|gb|EDW52079.1| GM16754 [Drosophila sechellia]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/279 (56%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 52  LDKNKGIKTEDLYVAGF---NIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGH 108
           +D +KG+ TE LY  G     I    +CPK G  +K+L+LI+SA+ H  AR +IRQTW H
Sbjct: 308 VDPSKGVATEKLYEPGHVDEEIDAERICPKGGQFIKLLVLISSAMSHDAARMSIRQTWMH 367

Query: 109 YNLRNDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHD 167
           Y  R DV +AFV+G G+ D+ N+ +++E+ +YGD+I+GNF+DSY+NLTLKT++ +EW   
Sbjct: 368 YGTRRDVGMAFVLGRGTNDTINKALTQENFIYGDLIRGNFIDSYNNLTLKTISTLEWADV 427

Query: 168 YCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQ 227
           +CP   +ILKTDDDMFINVPKLLTFL KH++ K T +GRLAKKW+PIR   SKYYVS  Q
Sbjct: 428 HCPKAKYILKTDDDMFINVPKLLTFLDKHKD-KRTIYGRLAKKWKPIRNKKSKYYVSVDQ 486

Query: 228 YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEF 287
           ++  +FP FTTGPAY+ T D+V ++Y ++L+T YLKLEDVFTTG+VA+SL +KR   NEF
Sbjct: 487 FAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVAKSLNVKRVQANEF 546

Query: 288 FNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
            N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct: 547 VNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 585

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270015051|gb|EFA11499.1| hypothetical protein TcasGA2_TC014213 [Tribolium castaneum]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/275 (56%), Positives = 199/275 (72%), Gaps = 1/275 (0%)

Query: 53  DKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNLR 112
           D  +G+  E +Y AG       +CP+LG  LK+LI ITSA  H  AR AIR+TWGH+  R
Sbjct: 106 DLTRGVAAEIIYEAGHVDVSSQICPELGRDLKLLIAITSAPSHESARMAIRETWGHFASR 165

Query: 113 NDVAIAFVVG-IGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPD 171
            DVAIAF++G I +++ N  + +E  LYGDII+G F D+YDNLTLKT++M+EW+ +YCP 
Sbjct: 166 KDVAIAFMLGSISNETVNANIEKEQYLYGDIIRGKFRDTYDNLTLKTISMLEWVDNYCPK 225

Query: 172 THFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPN 231
             F+LKTDDDMFINV +LL F+ KH   + T +GRLAKKW+PIR   SKYY+SP QY P 
Sbjct: 226 AAFVLKTDDDMFINVSRLLAFIAKHSPEQRTIYGRLAKKWKPIRNKKSKYYISPNQYKPA 285

Query: 232 MFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKR 291
           +FPDFTTGPAYL  + +  ++Y  AL  TY KLEDVF TG+VA SLKIKR H  EF NKR
Sbjct: 286 VFPDFTTGPAYLLPARLSKELYVAALNHTYFKLEDVFVTGIVANSLKIKRVHAPEFLNKR 345

Query: 292 IPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
           + L  C+++KGISIHM+K  EQ++LWKKL D  +K
Sbjct: 346 VSLTPCSVQKGISIHMVKGVEQYDLWKKLHDVAAK 380

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195388018|ref|XP_002052689.1| GJ17692 [Drosophila virilis] gi|194149146|gb|EDW64844.1| GJ17692 [Drosophila virilis]

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 159/284 (55%), Positives = 211/284 (74%), Gaps = 6/284 (2%)

Query: 49  NKYLDKNKGIKTEDLYVAGF---NIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQT 105
           N  +D +KGI  E +Y +G     I    LCP  G  +++L+LITSA  H++AR +IRQT
Sbjct: 336 NGPVDPSKGIAAEKIYESGHLNDEIDLERLCPLNGATIRLLVLITSAQTHADARMSIRQT 395

Query: 106 WGHYNLRNDVAIAFVVGIGSDSG-NQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEW 164
           WGHY +R D+++AFVVG G++   N  +S+E+ +YGD+I+GNF+DSY+NLTLKT++ +EW
Sbjct: 396 WGHYGVRRDISMAFVVGRGTNETVNVALSQENFIYGDLIRGNFIDSYNNLTLKTISSLEW 455

Query: 165 IHDYCPDTHFILKTDDDMFINVPKLLTFL--VKHQNSKMTFFGRLAKKWRPIRKSSSKYY 222
           +  +C    +ILKTDDDMFINVP+LLTFL  ++ +  K   FGRLAKKW+PIR   SKYY
Sbjct: 456 VDQHCQHAKYILKTDDDMFINVPRLLTFLTQLEKRKQKRAIFGRLAKKWKPIRNKKSKYY 515

Query: 223 VSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ 282
           VS  Q+   +FP FTTGPAY+ T +VV D+Y ++L+T YLKLEDVFTTG+VAQSL I+R 
Sbjct: 516 VSTDQFPAAVFPSFTTGPAYVMTGEVVHDLYVRSLKTVYLKLEDVFTTGIVAQSLGIERL 575

Query: 283 HVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
           HVNEF N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct: 576 HVNEFVNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 619

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
FB|FBgn0031988	585	CG8668 [Drosophila melanogaste	0.748	0.468	0.541	2.2e-80
FB|FBgn0031986	420	CG8673 [Drosophila melanogaste	0.808	0.704	0.448	1.2e-65
UNIPROTKB|J9PAK9	323	B3GALT5 "Uncharacterized prote	0.628	0.712	0.371	2.6e-38
UNIPROTKB|E1BZG7	309	B3GALT5 "Uncharacterized prote	0.612	0.724	0.380	1.9e-37
UNIPROTKB|Q9Y2C3	310	B3GALT5 "Beta-1,3-galactosyltr	0.644	0.761	0.362	3.9e-37
UNIPROTKB|F1MSJ4	272	B3GALT5 "Uncharacterized prote	0.622	0.838	0.367	2.7e-36
UNIPROTKB|F1SGT9	311	B3GALT5 "Uncharacterized prote	0.625	0.736	0.361	1.9e-35
MGI|MGI:2136878	308	B3galt5 "UDP-Gal:betaGlcNAc be	0.642	0.762	0.352	1.1e-34
RGD|1306727	308	B3galt5 "UDP-Gal:betaGlcNAc be	0.625	0.743	0.361	1.7e-34
UNIPROTKB|E1C4T5	326	B3GALT1 "Uncharacterized prote	0.606	0.680	0.349	3.2e-33

FB|FBgn0031988 CG8668 [Drosophila melanogaster (taxid:7227)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 151/279 (54%), Positives = 200/279 (71%)

Query:    52 LDKNKGIKTEDLYVAGF---NIPCVDLCPXXXXXXXXXXXXTSALDHSEARSAIRQTWGH 108
             +D +KG+ TE LY  G     I    +CP            +SA+ H  AR +IRQTW H
Sbjct:   306 VDPSKGVATETLYEPGHVDEEIDAERICPKGGEFIKLLVLISSAMSHDAARMSIRQTWMH 365

Query:   109 YNLRNDVAIAFVVGIGSDSG-NQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHD 167
             Y  R DV +AFV+G G++   N+ +++E+ +YGD+I+GNF+DSY+NLTLKT++ +EW   
Sbjct:   366 YGTRRDVGMAFVLGRGTNETINKALTQENFIYGDLIRGNFIDSYNNLTLKTISTLEWADV 425

Query:   168 YCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQ 227
             +CP   +ILKTDDDMFINVPKLLTFL KH++ K T +GRLAKKW+PIR   SKYYVS  Q
Sbjct:   426 HCPKAKYILKTDDDMFINVPKLLTFLDKHKD-KRTIYGRLAKKWKPIRNKKSKYYVSVDQ 484

Query:   228 YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEF 287
             ++  +FP FTTGPAY+ T D+V ++Y ++L+T YLKLEDVFTTG+VA+SL +KR   NEF
Sbjct:   485 FAAGVFPSFTTGPAYVLTGDIVHELYVRSLKTVYLKLEDVFTTGIVAKSLNVKRVQANEF 544

Query:   288 FNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDGRSK 326
              N+RI  N C I+  IS+HMIK +EQF+LWKKLLD  +K
Sbjct:   545 VNRRISFNPCNIRNAISVHMIKSNEQFDLWKKLLDQTTK 583

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008039 "synaptic target recognition" evidence=IMP

FB|FBgn0031986 CG8673 [Drosophila melanogaster (taxid:7227)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 139/310 (44%), Positives = 193/310 (62%)

Query:    18 VETKKFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCP 77
             +++K   + K++VL  I  E  V+  +P+ K  Y  K   + +E        I    +CP
Sbjct:   119 LDSKDILAKKSVVLYSIDTEVPVR--MPLVKTIY--KPGHLDSE--------IDMERICP 166

Query:    78 XXXXXXXXXXXXTSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSD-SGNQIVSEES 136
                         TS+L HS AR +IRQTW HY  R DV +AFV+G G + S  + + +E 
Sbjct:   167 QKGLSTQLLVLITSSLRHSAARMSIRQTWMHYGSRRDVGMAFVLGKGKNKSVKKAIDQED 226

Query:   137 NLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH 196
              +Y D+I+G+F+DSY+NLTLKT++++EW   +CP   ++LKTDDDMFINVPKLLT L+  
Sbjct:   227 FMYQDLIRGHFIDSYNNLTLKTISLLEWADLHCPKAKYVLKTDDDMFINVPKLLT-LIST 285

Query:   197 QNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKA 256
               +  T +GR A+ W+PIR   SKY++S  QY    FP FTTGPAYL T D+V  +Y ++
Sbjct:   286 LKANRTIYGRRAENWKPIRNRWSKYHISNAQYGKPTFPYFTTGPAYLLTGDIVHALYVQS 345

Query:   257 LETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFEL 316
             L T +LKLEDVFTTG+VA+SL I+R +V E  N R     C I+  I+IHM++ +EQF L
Sbjct:   346 LNTAFLKLEDVFTTGIVAESLNIRRVNVREMANTRTKFETCHIRDKITIHMVRNNEQFTL 405

Query:   317 WKKLLDGRSK 326
             W  LLD   K
Sbjct:   406 WNMLLDDTIK 415

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=ISS

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|J9PAK9 B3GALT5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 88/237 (37%), Positives = 135/237 (56%)

Query:    90 TSALDHSEARSAIRQTWG-HYNLRN-DVAIAFVVGI-GSDSGNQIVSEESNLYGDIIQGN 146
             TS+ +    R+ IR TWG   N+    +   F++G   S   +++V++ES  + DIIQ +
Sbjct:    77 TSSHEQVFVRTVIRNTWGKEKNVHGRPIKTFFLLGATASKDLSKVVAQESQRHRDIIQKD 136

Query:   147 FVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGR 206
             FVD+Y NLTLKT+  +EWIH +CP   F++KTD DMF+NV  L   L+K   +   F G 
Sbjct:   137 FVDAYFNLTLKTMMGIEWIHRFCPQATFVMKTDSDMFVNVYYLTELLLKKNRTTRFFTGF 196

Query:   207 LAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED 266
             L     PIR  ++K++VS  +Y  + +P F +G  Y+F+SDV S VY  +    ++KLED
Sbjct:   197 LKLNEFPIRDKANKWFVSKYEYPWDKYPPFCSGTGYVFSSDVASQVYNVSDSVPFIKLED 256

Query:   267 VFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
             VF  G+    LKI+ + ++    FF   +P + C  KK ++ H +K       W+ L
Sbjct:   257 VFV-GLCLAKLKIRLEELHSEQTFFPNGLPFSTCRFKKIVACHFVKPRNMLSYWQAL 312

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|E1BZG7 B3GALT5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 88/231 (38%), Positives = 132/231 (57%)

Query:    97 EARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGNQI-VSEESNLYGDIIQGNFVDSYDN 153
             +AR  IRQTWG         +   F++G   D+G Q  +S ES  Y DIIQ +FVD+Y N
Sbjct:    79 DARRVIRQTWGKERTVAGKRLVTYFLLGAPVDNGQQADISAESQEYKDIIQKDFVDTYYN 138

Query:   154 LTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRP 213
             LTLKT+  +EWIH +C  + F++KTD D+F+NV  L   L+K + +   + G L     P
Sbjct:   139 LTLKTMMGIEWIHQFCNQSSFVMKTDVDVFVNVFYLTELLLKKKRTTGLYTGFLKLHEHP 198

Query:   214 IRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVV 273
             IRK+ SK+ V   +YS   +P F +G  Y+ ++DV S +Y  +    ++KLEDVF  G+ 
Sbjct:   199 IRKNDSKWNVRIEEYSGKTYPPFCSGTGYVLSTDVASQIYNVSESIPFIKLEDVFV-GLC 257

Query:   274 AQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLL 321
                LKI+ + ++    FF ++IP +    KK ++ H +   EQ   W +LL
Sbjct:   258 LDKLKIQPEELHSEQTFFPEKIPFSVSRFKKIVTCHEVSLSEQRSYWNQLL 308

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|Q9Y2C3 B3GALT5 "Beta-1,3-galactosyltransferase 5" [Homo sapiens (taxid:9606)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 88/243 (36%), Positives = 134/243 (55%)

Query:    90 TSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGN-QIVSEESNLYGDIIQGN 146
             TS+      R AIRQTWG   +     +   F++G  S +   + V +ES  +GDIIQ +
Sbjct:    64 TSSHKQLAERMAIRQTWGKERMVKGKQLKTFFLLGTTSSAAETKEVDQESQRHGDIIQKD 123

Query:   147 FVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGR 206
             F+D Y NLTLKT+  +EW+H +CP   F++KTD DMFINV  L   L+K   +   F G 
Sbjct:   124 FLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMFINVDYLTELLLKKNRTTRFFTGF 183

Query:   207 LAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED 266
             L     PIR+  SK++VS  +Y  + +P F +G  Y+F+ DV S VY  +    Y+KLED
Sbjct:   184 LKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTGYVFSGDVASQVYNVSKSVPYIKLED 243

Query:   267 VFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLDG 323
             VF  G+  + L I+ + ++    FF   +  + C  ++ ++ H IK     + W+ L + 
Sbjct:   244 VFV-GLCLERLNIRLEELHSQPTFFPGGLRFSVCLFRRIVACHFIKPRTLLDYWQALENS 302

Query:   324 RSK 326
             R +
Sbjct:   303 RGE 305

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=TAS

UNIPROTKB|F1MSJ4 B3GALT5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 87/237 (36%), Positives = 128/237 (54%)

Query:    92 ALDHSE--ARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQI---VSEESNLYGDIIQGN 146
             A  H +   R  IR TWG   +     I     +G+     I   V++ES  + DIIQ +
Sbjct:    27 ASSHEQWFVRLVIRSTWGKEKIIKGKRIKTFFLLGTSPSKHISREVAKESQKFRDIIQKD 86

Query:   147 FVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGR 206
             F D Y NLTLKT+  M+WI+ +CP T F++KTD DMF+N+  L   L+K   +   F G 
Sbjct:    87 FTDDYFNLTLKTMMGMQWIYSFCPQTTFVMKTDSDMFVNIYYLTELLLKKNRTTRFFTGF 146

Query:   207 LAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED 266
             L     PIRK  +K++VS  +Y  + +P F +G  Y+F+SDV  +VY  A    ++KLED
Sbjct:   147 LKLNEYPIRKRFNKWFVSKYEYPWDKYPPFCSGTGYVFSSDVAGEVYHVANSVPFIKLED 206

Query:   267 VFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
             VF  G+  + LKI+ + ++    FF   +P   C  KK ++ H IK  +    W+ L
Sbjct:   207 VFV-GLCLKRLKIRLEELHSEQTFFPDGLPFTTCRYKKIVASHHIKPRDILRYWQAL 262

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

UNIPROTKB|F1SGT9 B3GALT5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 86/238 (36%), Positives = 133/238 (55%)

Query:    90 TSALDHSEARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSGN--QIVSEESNLYGDIIQG 145
             TS+ +   AR AIRQTWG  +      I   F++G  ++SG+  + V++E   Y DIIQ 
Sbjct:    65 TSSHEQLLARKAIRQTWGKASTVQGKRIRSFFLLGT-TNSGDLSRAVAQEIEQYHDIIQK 123

Query:   146 NFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFG 205
             +F+D Y NLTLKT+  MEW+  +CP   F++KTD DMF+N+  L   L+    +   F G
Sbjct:   124 DFLDVYFNLTLKTMMGMEWVSRFCPQATFVMKTDSDMFVNIYYLTDLLLAKNRTTRFFTG 183

Query:   206 RLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLE 265
              L     PIR+  +K++VS  +Y    +P F +G  Y+F+SDV   VY  A    ++KLE
Sbjct:   184 FLKLNEYPIRRRYNKWFVSKYEYPWEKYPPFCSGTGYVFSSDVAGQVYGVAESVPFIKLE 243

Query:   266 DVFTTGVVAQSLKIKRQHVNE---FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
             DVF  G+  + L+IK + ++    FF   +P   C  ++ ++ H +K  +    W+ L
Sbjct:   244 DVFV-GLCLEKLQIKLEELHSKQTFFPDGLPFTICRYRRIVASHHVKPQDLLNYWQAL 300

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

MGI|MGI:2136878 B3galt5 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5" [Mus musculus (taxid:10090)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 86/244 (35%), Positives = 135/244 (55%)

Query:    90 TSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGNQI--VSEESNLYGDIIQG 145
             TS+     AR AIR+TWG         V   F++G  SDS  ++   + ES  + DIIQ 
Sbjct:    62 TSSHKQLAARMAIRKTWGRETSVQGQQVRTFFLLGT-SDSTEEMDATTLESEQHRDIIQK 120

Query:   146 NFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFG 205
             +F D+Y NLTLKT+  MEW++ +CP T +++KTD DMF+NV  L   L+K   +   F G
Sbjct:   121 DFKDAYFNLTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTG 180

Query:   206 RLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLE 265
              +     PIR+  +K++VS  +Y  + +P F +G  Y+F+SDV   VY  +    ++KLE
Sbjct:   181 YIKPHDFPIRQKFNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLE 240

Query:   266 DVFTTGVVAQSLKIKRQ--HVNE-FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKLLD 322
             DVF  G+    LKI+ +  H  + FF   +  + C  +K ++ H +K  +    W+ L +
Sbjct:   241 DVFV-GLCLAKLKIRPEELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQALEN 299

Query:   323 GRSK 326
              + +
Sbjct:   300 SKEQ 303

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

RGD|1306727 B3galt5 "UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5" [Rattus norvegicus (taxid:10116)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 86/238 (36%), Positives = 134/238 (56%)

Query:    90 TSALDHSEARSAIRQTWGHY-NLRND-VAIAFVVGIGSDSGNQI--VSEESNLYGDIIQG 145
             TS+     AR AIR+TWG   +++   V   F++G  SDS   +   + ES  + DIIQ 
Sbjct:    62 TSSHKQLAARMAIRKTWGRETSVQGQPVRTFFLLG-SSDSTEDMDATALESEQHRDIIQK 120

Query:   146 NFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFG 205
             +F D+Y NLTLKT+  MEW++ +CP T +++KTD DMF+NV  L   L+K   +   F G
Sbjct:   121 DFKDAYFNLTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTG 180

Query:   206 RLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLE 265
              +     PIR+  +K++VS  +Y  + +P F +G  Y+F+SDV   VY  +    ++KLE
Sbjct:   181 YIKPHDFPIRQKFNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLE 240

Query:   266 DVFTTGVVAQSLKIKRQ--HVNE-FFNKRIPLNACTIKKGISIHMIKYHEQFELWKKL 320
             DVF  G+    LKI+ +  H  + FF   +  + C  +K ++ H +K  +    W+ L
Sbjct:   241 DVFV-GLCLAKLKIRPEELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQAL 297

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1C4T5 B3GALT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 80/229 (34%), Positives = 127/229 (55%)

Query:    97 EARSAIRQTWGHYNLRNDVAIA--FVVGIGSDSG-NQIVSEESNLYGDIIQGNFVDSYDN 153
             +AR AIR+TWG  N    + IA  F++G  +D   NQ+V +ES ++ DII  +F+DSY N
Sbjct:    92 DARQAIRETWGDENNFKGIKIATLFLLGKNADPVLNQMVEQESQIFHDIIVEDFIDSYHN 151

Query:   154 LTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVK-HQNSKMTFFGRLAKKWR 212
             LTLKT+  M W+  YC    +++KTD D+F+N+  L+  L+K +   +  +F        
Sbjct:   152 LTLKTLMGMRWVATYCSKAKYVMKTDSDIFVNMDNLIYKLLKPNTKPRRRYFTGYVINGG 211

Query:   213 PIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGV 272
             PIR   SK+Y+    Y  + +P F +G  Y+F++DV   +Y  +L T  L LEDV+  G+
Sbjct:   212 PIRDVRSKWYMPRDLYPDSNYPPFCSGTGYIFSADVAELIYKTSLHTRLLHLEDVYV-GL 270

Query:   273 VAQSLKIKRQHVNEFFNK-RIPLNACTIKKGISIHMIKYHEQFELWKKL 320
               + L I     N  FN  ++  + C  ++ I++H I   E   +W  +
Sbjct:   271 CLRKLGI-HPFQNSGFNHWKMAYSLCRYRRVITVHQITPEEMHRIWNDM 318

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008499 "UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity" evidence=IEA

GO:0009312 "oligosaccharide biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9N295	B3GT5_PANTR	2, ., 4, ., 1, ., -	0.3625	0.6366	0.7845	yes	N/A
Q9JI67	B3GT5_MOUSE	2, ., 4, ., 1, ., -	0.3453	0.6557	0.7792	yes	N/A
Q9Y2C3	B3GT5_HUMAN	2, ., 4, ., 1, ., -	0.3588	0.6584	0.7774	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	366
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	3e-50
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	2e-23
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	8e-06

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  166 bits (422), Expect = 3e-50
 Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 97  EARSAIRQTWGHYNL--RNDVAIAFVVGIGSDSGNQI---VSEESNLYGDIIQGNFVDSY 151
             R+AIR+TW +        +   F+VG+ +D+  ++   V EE+ LYGDI+  +F D+Y
Sbjct: 1   ARRNAIRKTWMNKGNSEGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVDFEDTY 60

Query: 152 DNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMT--FFGRLAK 209
           +NLT KT+  + +     P   +I K DDD++    KLL+ L +   +     F+G + K
Sbjct: 61  ENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFYGYVMK 120

Query: 210 KWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFT 269
           +   IR   SK+YV P  Y  + +P + +GP YL + D    +   +    +L++EDV+ 
Sbjct: 121 EGPVIRNKKSKWYVPPSDYPCSRYPPYASGPFYLLSRDAAELLLKASKHRRFLQIEDVYV 180

Query: 270 TGVVAQSLKIKRQH 283
           TG++A  L I R  
Sbjct: 181 TGILADDLGISRVD 194

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score =  101 bits (254), Expect = 2e-23
 Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 28/257 (10%)

Query: 83  LKILILITSALDHSEARSAIRQTWGHYN-LRN-DVAIAFVVGIGSDSGNQIVSE----ES 136
           L + I + S  ++ + R A+R+TW  Y+ +R+  VA+ F VG+     NQ+V+E    E+
Sbjct: 385 LDLFIGVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHK---NQMVNEELWNEA 441

Query: 137 NLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYC------PDTHFILKTDDDMFINVPKLL 190
             YGDI    FVD Y  +T KT+A+       C          +++KTDDD F+ V ++L
Sbjct: 442 RTYGDIQLMPFVDYYSLITWKTLAI-------CIFGTEVVSAKYVMKTDDDAFVRVDEVL 494

Query: 191 TFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVS 250
             L +   S    +G +    +P R   SK+Y+SP ++    +P +  GP Y+ + D+  
Sbjct: 495 ASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVVSRDIAK 554

Query: 251 DVYT--KALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIKKG-ISIHM 307
           +VY   K       KLEDV   G+    +K +   V    + RI    C  K G +  H 
Sbjct: 555 EVYKRHKEGRLKMFKLEDV-AMGIWIAEMKKEGLEVKYENDGRIYNEGC--KDGYVVAHY 611

Query: 308 IKYHEQFELWKKLLDGR 324
               E   LW+KL +G+
Sbjct: 612 QSPREMLCLWQKLQEGK 628

Length = 636

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 27/185 (14%)

Query: 85  ILILITSALDHSEARSAIRQTW---GHYNLR----NDVAIAFVVGIGSDSG---NQIVSE 134
           +++ I +A    + R ++R TW   G    +      + I FV+G  + SG   ++ +  
Sbjct: 141 MVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEA 200

Query: 135 ESNLYGDIIQGNFVDSYDNLTLKT-----VAMMEWIHDYCPDTHFILKTDDDMFINVPKL 189
           E   +GD ++ + V+ Y  L+ KT      A+  W      D  F +K DDD+ +N+  L
Sbjct: 201 EDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMW------DADFYVKVDDDVHVNIATL 254

Query: 190 LTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQY----SPNMFPDFTTGPAYLFT 245
              LV+H+     + G +  K  P+       Y  P  +    + N +    TG  Y  +
Sbjct: 255 GETLVRHRKKPRVYIGCM--KSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAIS 312

Query: 246 SDVVS 250
            D+ S
Sbjct: 313 KDLAS 317

Length = 408

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287|consensus	349		100.0
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	100.0
KOG2288|consensus	274		100.0
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.85
KOG2246|consensus	364		99.75
PLN03153	537	hypothetical protein; Provisional	99.49
KOG3708|consensus	681		97.91
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	96.85
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	96.69
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	95.44
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	95.36
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	95.17
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.8
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	94.71
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	94.65
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	94.56
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	94.47
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	94.04
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	93.71
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	93.62
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	93.53
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	93.51
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	93.38
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	93.36
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	93.33
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	92.7
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	92.2
PRK11204	420	N-glycosyltransferase; Provisional	91.21
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	90.14
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	90.09
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	89.7
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	88.42
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	87.99
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	87.63
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	87.57
PRK14583	444	hmsR N-glycosyltransferase; Provisional	87.56
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	86.89
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	85.71
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	85.65
COG1216	305	Predicted glycosyltransferases [General function p	85.64
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	85.13
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	84.97
COG1215	439	Glycosyltransferases, probably involved in cell wa	83.76
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	81.63

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=3.9e-64  Score=519.04  Aligned_cols=302  Identities=26%  Similarity=0.410  Sum_probs=257.8

Q ss_pred             eeeEEEeeccccc-ccccceeeeecCcccceEEeccccCCcCcccCCCCCcccccccccCccccCCCCCCCCCCCceEEE
Q psy16851          9 NFSIVTVPAVETK-KFTSTKALVLEDITRESVVQKVLPVQKNKYLDKNKGIKTEDLYVAGFNIPCVDLCPKLGDGLKILI   87 (366)
Q Consensus         9 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~Lli   87 (366)
                      +=-+..|||++.. +|..+...|.||+++.|+.++.+|.++++.          .+.+......++  |+. +++++|||
T Consensus       323 G~H~tsF~yR~~lep~~V~~l~V~GDv~l~SV~a~~~p~~~~~~----------~~~d~e~lkApp--L~~-~~~~~LlI  389 (636)
T PLN03133        323 GKHITSFAYRETLEPWLVSEVRISGDLKLISVLASGLPTSEDSE----------HVIDLEALKSPP--LSP-KKPLDLFI  389 (636)
T ss_pred             CeEEEeeeCCCCCCccceeEEEEeCcEEEEEEEeeCCCCCCchh----------cccchHHhcCCC--CCC-CCceEEEE
Confidence            3446689999855 688999999999999999999999988421          011111122222  553 45789999


Q ss_pred             EEEcCcCCHHHHHHHHHHHhcccCC--CCeeEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHH
Q psy16851         88 LITSALDHSEARSAIRQTWGHYNLR--NDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEW  164 (366)
Q Consensus        88 ~V~Sap~~~~rR~aIR~TW~~~~~~--~~v~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w  164 (366)
                      +|+|+|+|++||+|||+|||+....  ..++++|++|.+. +.+++.|.+|++.||||||+||.|+|+|||+|+++++.|
T Consensus       390 ~V~Sap~nf~rR~AIR~TWg~~~~~~~~~v~~rFvVG~s~n~~l~~~L~~Ea~~ygDIIq~dF~DsY~NLTlKtl~~~~w  469 (636)
T PLN03133        390 GVFSTANNFKRRMAVRRTWMQYDAVRSGAVAVRFFVGLHKNQMVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIF  469 (636)
T ss_pred             EEeCCcccHHHHHHHHHhhccccccCCCceEEEEEEecCCcHHHHHHHHHHHHHcCCeEEEeeechhhhhHHHHHHHHHH
Confidence            9999999999999999999996532  3588999999988 778899999999999999999999999999999999999


Q ss_pred             HHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccc
Q psy16851        165 IHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLF  244 (366)
Q Consensus       165 ~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvl  244 (366)
                      +. +|++++|+||+|||+|||+++|+++|+.....+.+|+|++..++.|+|++.+|||||.++||.+.|||||+|+||||
T Consensus       470 a~-~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~eyp~~~YPpYasG~gYVl  548 (636)
T PLN03133        470 GT-EVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWPEETYPPWAHGPGYVV  548 (636)
T ss_pred             HH-hCCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHHHCCCCCCCCCCCcCEEEE
Confidence            86 58899999999999999999999999877667789999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHhh--hcCCCCCCCchhhHHHHHH---hCCCceeecCCcccCCCCCCCCccCCeEEEecCChHHHHHHHHH
Q psy16851        245 TSDVVSDVYTKA--LETTYLKLEDVFTTGVVAQ---SLKIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFELWKK  319 (366)
Q Consensus       245 S~d~~~~l~~~s--~~~~~~~~EDV~ltGi~~~---~~gi~~~~~~~f~~~~~~~~~c~~~~~it~H~~~p~em~~lW~~  319 (366)
                      |+++|+.|+.++  ..+++|++||||+ |+|++   ++|+.+.+...   .+....+|. .++|++|+++|.+|+++|++
T Consensus       549 S~Dla~~L~~~s~s~~l~~f~lEDVyv-Gi~l~~l~k~gl~v~~~~~---~r~~~~~C~-~~~i~~H~~sP~eM~~lW~~  623 (636)
T PLN03133        549 SRDIAKEVYKRHKEGRLKMFKLEDVAM-GIWIAEMKKEGLEVKYEND---GRIYNEGCK-DGYVVAHYQSPREMLCLWQK  623 (636)
T ss_pred             cHHHHHHHHHhhhhcccCcCChhhHhH-HHHHHHhcccCCCceeeCC---CcccCCcCC-CCeEEEecCCHHHHHHHHHH
Confidence            999999999876  4688999999997 99976   45666654443   244568898 56899999999999999999


Q ss_pred             hhcCC-CCcch
Q psy16851        320 LLDGR-SKYID  329 (366)
Q Consensus       320 l~~~~-~~~~~  329 (366)
                      +++++ .+||.
T Consensus       624 l~~~~~~~Cc~  634 (636)
T PLN03133        624 LQEGKRATCCG  634 (636)
T ss_pred             HhccCCCCccC
Confidence            99875 99974

>KOG2287|consensus

Probab=100.00  E-value=7.9e-62  Score=479.09  Aligned_cols=264  Identities=34%  Similarity=0.622  Sum_probs=240.0

Q ss_pred             ccccCccccCCCCCCCCCCCceEEEEEEcCcCCHHHHHHHHHHHhcccC--CCCeeEEEEecCCCc--hhhhhHHHHhhh
Q psy16851         63 LYVAGFNIPCVDLCPKLGDGLKILILITSALDHSEARSAIRQTWGHYNL--RNDVAIAFVVGIGSD--SGNQIVSEESNL  138 (366)
Q Consensus        63 ~~~~~~~~~~~~~C~~~~~~~~Lli~V~Sap~~~~rR~aIR~TW~~~~~--~~~v~v~FvlG~~~~--~~~~~l~~E~~~  138 (366)
                      .....+.+..|..|...+ .++|+++|+|+++|++||+|||+|||++..  ...++++|++|.+..  .++++|.+|++.
T Consensus        76 ~~~~~~~l~~p~~~~~~~-~~~lLl~V~S~~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~  154 (349)
T KOG2287|consen   76 FQKFFYLLYLPEICDPDR-PPELLLLVKSAPDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNEDKLNKLLADEARL  154 (349)
T ss_pred             hccChhhhcCChhhcCCC-CceEEEEEecCCCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHHHHHHHHHHHHHH
Confidence            334444667776666533 689999999999999999999999999875  346899999999983  458999999999


Q ss_pred             cCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc-CCCcceEeeeecCCCcccccC
Q psy16851        139 YGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH-QNSKMTFFGRLAKKWRPIRKS  217 (366)
Q Consensus       139 y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~-~~~~~~~~G~~~~~~~P~R~~  217 (366)
                      ||||||+||.|+|.|+|+|++++++|+.++||+|+|+||+|||+|||+++|+.+|.+. .+.+.+|+|++..+..|+|++
T Consensus       155 ygDIi~~df~Dty~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~  234 (349)
T KOG2287|consen  155 YGDIIQVDFEDTYFNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDK  234 (349)
T ss_pred             hCCEEEEecccchhchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998 788899999999999999999


Q ss_pred             CCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHh-CCCceeecCCcccCCCCCCC
Q psy16851        218 SSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQS-LKIKRQHVNEFFNKRIPLNA  296 (366)
Q Consensus       218 ~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~-~gi~~~~~~~f~~~~~~~~~  296 (366)
                      .+|||||+++||...|||||+|+|||+|+++|++|+.++.+.+++++|||++ |+|+++ +||.+.+++.|...+...++
T Consensus       235 ~~KwyVp~~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~-g~~l~~~~gi~~~~~~~~~~~~~~~~~  313 (349)
T KOG2287|consen  235 TSKWYVPESEYPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFV-GGCLAEDLGIKPVNHPGFFEIPLSFDP  313 (349)
T ss_pred             CCCCccCHHHCCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHH-HHHHHHhcCCCcccCcccccccccCCC
Confidence            9999999999999999999999999999999999999999999999999998 555555 59999999997776667899


Q ss_pred             CccCCeEEEecCChHHHHHHHHHhhc-CCCCcc
Q psy16851        297 CTIKKGISIHMIKYHEQFELWKKLLD-GRSKYI  328 (366)
Q Consensus       297 c~~~~~it~H~~~p~em~~lW~~l~~-~~~~~~  328 (366)
                      |++++++++|..+|.||.++|+.++. .+.+|.
T Consensus       314 ~~~~~~~~~H~~~p~e~~~~w~~~~~~~~~~c~  346 (349)
T KOG2287|consen  314 CCYRDLLAVHRLSPNEMIYLWKKLKDLANLKCK  346 (349)
T ss_pred             CcccceEEEecCCHHHHHHHHHHhhcccccccc
Confidence            99999999999999999999999998 778885

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=2.2e-51  Score=403.55  Aligned_cols=215  Identities=21%  Similarity=0.329  Sum_probs=193.4

Q ss_pred             CCCceEEEEEEcCcCCHHHHHHHHHHHhcccC-------CCCeeEEEEecCCC---chhhhhHHHHhhhcCCeEEecccC
Q psy16851         80 GDGLKILILITSALDHSEARSAIRQTWGHYNL-------RNDVAIAFVVGIGS---DSGNQIVSEESNLYGDIIQGNFVD  149 (366)
Q Consensus        80 ~~~~~Lli~V~Sap~~~~rR~aIR~TW~~~~~-------~~~v~v~FvlG~~~---~~~~~~l~~E~~~y~DIi~~df~D  149 (366)
                      .++++|+|+|.|+|+|++||+|||+|||+...       ..++.++|++|.+.   ..++++|.+|+++|||||++||.|
T Consensus       136 ~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvD  215 (408)
T PLN03193        136 KRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVE  215 (408)
T ss_pred             cceEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEeccc
Confidence            35689999999999999999999999998642       24689999999986   468889999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCC-
Q psy16851        150 SYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQY-  228 (366)
Q Consensus       150 sY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~y-  228 (366)
                      +|.|||+||+++|+|+.++| +++||||+|||+|||+++|+.+|.+.....++|+|++..  .|+|++.++||++++.| 
T Consensus       216 sY~NLT~KTl~~f~wA~~~~-dAkF~mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~--gPvr~~~~~ky~epe~w~  292 (408)
T PLN03193        216 GYLELSAKTKTYFATAVAMW-DADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKS--GPVLSQKGVRYHEPEYWK  292 (408)
T ss_pred             ccccchHHHHHHHHHHHHcC-CCeEEEEcCCCceEcHHHHHHHHHhcCCCCCEEEEeccc--CccccCCCCcCcCccccc
Confidence            99999999999999999987 899999999999999999999998765556799999865  48898888888888888 


Q ss_pred             ---CCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecCCcccCCCCCCCCccC
Q psy16851        229 ---SPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACTIK  300 (366)
Q Consensus       229 ---p~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~~f~~~~~~~~~c~~~  300 (366)
                         |.+.|||||+|+|||||+|+|+.|+.++...+.+++|||+| |+|+..++|+++|..+|...  ....|.++
T Consensus       293 ~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~v-G~Wl~~L~V~~vdd~~fcc~--~~~~C~~~  364 (408)
T PLN03193        293 FGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSL-GSWFIGLDVEHIDDRRLCCG--TPPDCEWK  364 (408)
T ss_pred             ccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCcchhhh-hhHhccCCceeeecccccCC--CCcccccc
Confidence               66999999999999999999999998888888999999997 99999999999999999764  34678765

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=9.3e-51  Score=369.52  Aligned_cols=188  Identities=43%  Similarity=0.764  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHhcccC--CCCeeEEEEecCCC---chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCC
Q psy16851         97 EARSAIRQTWGHYNL--RNDVAIAFVVGIGS---DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPD  171 (366)
Q Consensus        97 ~rR~aIR~TW~~~~~--~~~v~v~FvlG~~~---~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~  171 (366)
                      +||++||+|||+...  ..+++++|++|.+.   ..+++.|.+|+++|+||||+||.|+|.|+|+|++++++|+.++|++
T Consensus         1 ~rR~~IR~TW~~~~~~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~~~c~~   80 (195)
T PF01762_consen    1 ERRQAIRETWGNQRNFKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWASKHCPN   80 (195)
T ss_pred             ChHHHHHHHHhcccccCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHHhhCCc
Confidence            589999999999763  35789999999987   4567789999999999999999999999999999999999999999


Q ss_pred             cceEEEeCCCceechHHHHHHHHhc--CCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHH
Q psy16851        172 THFILKTDDDMFINVPKLLTFLVKH--QNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVV  249 (366)
Q Consensus       172 ~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~  249 (366)
                      ++|++|+|||+|||+++|.++|...  ...+..++|....+..|.|++.+|||+|.++||.+.|||||+|+||+||+++|
T Consensus        81 ~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~y~~~~yP~y~~G~~yvls~~~v  160 (195)
T PF01762_consen   81 AKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEEYPDDYYPPYCSGGGYVLSSDVV  160 (195)
T ss_pred             hhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeeeecccccCCCcCCCCeEEecHHHH
Confidence            9999999999999999999999987  55678899999988899999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        250 SDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       250 ~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      +.|+.++..++.+++|||++ |+|++++||+++|.+
T Consensus       161 ~~i~~~~~~~~~~~~eDv~i-Gi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  161 KRIYKASSHTPFFPLEDVFI-GILAEKLGIKPIHDP  195 (195)
T ss_pred             HHHHHHhhcCCCCCchHHHH-HHHHHHCCCCccCCC
Confidence            99999999999999999998 999999999998864

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=100.00  E-value=7.7e-36  Score=289.86  Aligned_cols=226  Identities=20%  Similarity=0.229  Sum_probs=183.2

Q ss_pred             CCceEEEEEEcCcCC--HHHHHHHHHHHhcccCC--------CCeeEEEEecCCC-c--hhhhhHHHHhhhcCCeEEecc
Q psy16851         81 DGLKILILITSALDH--SEARSAIRQTWGHYNLR--------NDVAIAFVVGIGS-D--SGNQIVSEESNLYGDIIQGNF  147 (366)
Q Consensus        81 ~~~~Lli~V~Sap~~--~~rR~aIR~TW~~~~~~--------~~v~v~FvlG~~~-~--~~~~~l~~E~~~y~DIi~~df  147 (366)
                      ++-.++++|.|..++  +.||++.|+||.++...        ..+-++|++|.+. .  +++++|++|++.|||||++||
T Consensus        78 ~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVilpf  157 (382)
T PTZ00210         78 QRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIITLPT  157 (382)
T ss_pred             CCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEEEec
Confidence            456789999999988  99999999999997531        1355899999988 4  789999999999999999999


Q ss_pred             ------------------cCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecC
Q psy16851        148 ------------------VDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAK  209 (366)
Q Consensus       148 ------------------~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~  209 (366)
                                        .|++.|+|+||+++++|+.+.||+++|+||+|||+|||+++++++|+.. +.+.+|+|.+..
T Consensus       158 ~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~-prr~LY~G~v~~  236 (382)
T PTZ00210        158 NDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM-PRHGLYMGRYNY  236 (382)
T ss_pred             ccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC-CCCceEEEeeCC
Confidence                              7777889999999999999999999999999999999999999999765 456799999988


Q ss_pred             CCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhc--C---C------------CCCCCchhhHHH
Q psy16851        210 KWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALE--T---T------------YLKLEDVFTTGV  272 (366)
Q Consensus       210 ~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~--~---~------------~~~~EDV~ltGi  272 (366)
                      ...|.|++               +||||+|+||+||+|+|+.|+.....  .   |            .+..||+++ |.
T Consensus       237 ~~~p~Rd~---------------~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~EDiMv-G~  300 (382)
T PTZ00210        237 YNRIWRRN---------------QLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMWDYFDFLDLGMFYEDVMV-GM  300 (382)
T ss_pred             CCccccCC---------------CCCccccceeeccHHHHHHHHhhChHhHhhcCCCchHHHHHHHHhhcCchHHHH-HH
Confidence            77787753               48999999999999999999987432  1   1            356899997 99


Q ss_pred             HHH-hCCCcee---ec--CCcccCCCCCCCCc---cCCeEEEecCChHHHHHHHHHhhcCCC
Q psy16851        273 VAQ-SLKIKRQ---HV--NEFFNKRIPLNACT---IKKGISIHMIKYHEQFELWKKLLDGRS  325 (366)
Q Consensus       273 ~~~-~~gi~~~---~~--~~f~~~~~~~~~c~---~~~~it~H~~~p~em~~lW~~l~~~~~  325 (366)
                      +++ +++.++.   ..  -+|++.+.  ..|.   ..+.|.+|+.++.+-..|.+.+++...
T Consensus       301 vLr~~~k~~~l~~V~~~~c~Fhd~~~--~~~~~~v~~~sVvvHhike~dYa~Lm~~F~n~~~  360 (382)
T PTZ00210        301 ILREKVVYRNLISVEMGRCHFHNAGK--FGVRKSVRNMSVVIHHIQEADYEMLMDYFPEGVI  360 (382)
T ss_pred             HHHHhcCcCceeeeccccccceecCC--CCCccccccceEEEEecCHHHHHHHHHHhcCCCC
Confidence            984 4444332   11  13554331  2332   247899999999988888888877644

>KOG2288|consensus

Probab=100.00  E-value=2.5e-35  Score=271.08  Aligned_cols=203  Identities=22%  Similarity=0.340  Sum_probs=180.2

Q ss_pred             CCceEEEEEEcCcCCHHHHHHHHHHHhcccC-------CCCeeEEEEecCCC--chhhhhHHHHhhhcCCeEEec-ccCC
Q psy16851         81 DGLKILILITSALDHSEARSAIRQTWGHYNL-------RNDVAIAFVVGIGS--DSGNQIVSEESNLYGDIIQGN-FVDS  150 (366)
Q Consensus        81 ~~~~Lli~V~Sap~~~~rR~aIR~TW~~~~~-------~~~v~v~FvlG~~~--~~~~~~l~~E~~~y~DIi~~d-f~Ds  150 (366)
                      +++.++|+|.|+++..+||+++|+||+....       ..+|.++|++|...  ....++|.+|.++|+|.+.+| ..|+
T Consensus         9 ~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~~~~g~~~~r~ie~E~~~~~DfllLd~h~E~   88 (274)
T KOG2288|consen    9 RKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGTATLGASLDRALEEENAQHGDFLLLDRHEEA   88 (274)
T ss_pred             cceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEeccCCccHHHHHHHHHHHHhcCCeEeechhHHH
Confidence            4688999999999999999999999998731       24788999999944  778889999999999999999 9999


Q ss_pred             CCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCC
Q psy16851        151 YDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSP  230 (366)
Q Consensus       151 Y~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~  230 (366)
                      |.+|+.||+++|.++.+++ +++|++|+|||+|||++.|...|.+.....++|+|++..+. .+-.+.+|||-|+ ..-.
T Consensus        89 Y~~Ls~Kt~~~f~~A~~~~-daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmksg~-v~~~~~~kw~Epe-Wkfg  165 (274)
T KOG2288|consen   89 YEELSAKTKAFFSAAVAHW-DAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMKSGP-VLTQPGGKWYEPE-WKFG  165 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cceEEEEccccceecHHHHHHHHHhhccCCceEEEEecCCc-cccCCCCcccChh-hhcC
Confidence            9999999999999999999 89999999999999999999999988777899999988763 3455689999998 3333


Q ss_pred             CC--CCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecCCc
Q psy16851        231 NM--FPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNEF  287 (366)
Q Consensus       231 ~~--yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~~f  287 (366)
                      +.  |-+|+.|++|+||++++..|..+......+..|||.+ |.|+..+.|+.+|.+++
T Consensus       166 ~~g~YfrhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDVSl-GaW~~gldV~h~dd~rl  223 (274)
T KOG2288|consen  166 DNGNYFRHATGGGYVLSKDLATYISINRQLLHKYANEDVSL-GAWMIGLDVEHVDDPRL  223 (274)
T ss_pred             cccccchhccCceEEeeHHHHHHHHHhHHHHHhhccCCccc-ceeeeeeeeeEecCCcc
Confidence            44  9999999999999999999998888788899999998 99998888888877744

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.85  E-value=3e-21  Score=182.77  Aligned_cols=210  Identities=22%  Similarity=0.271  Sum_probs=110.8

Q ss_pred             eEEEEEEcCcCCHHHH-HHHHHHHhcccCCCCeeEEE-EecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHH
Q psy16851         84 KILILITSALDHSEAR-SAIRQTWGHYNLRNDVAIAF-VVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAM  161 (366)
Q Consensus        84 ~Lli~V~Sap~~~~rR-~aIR~TW~~~~~~~~v~v~F-vlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~  161 (366)
                      +++|+|+|++++.+.| .+|++||++.+..    ..| +.....+.+    ..+  .-.+++..+....+...+++.++.
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~----~~~ifsd~~d~~l----~~~--~~~~l~~~~~~~~~~~~~~~~~~~   76 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCNK----QTFIFSDAEDPSL----PTV--TGVHLVNPNCDAGHCRKTLSCKMA   76 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSGG----GEEEEESS--HHH----HHH--HGGGEEE-------------HHHH
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcCC----ceEEecCcccccc----ccc--cccccccCCCcchhhHHHHHHHHH
Confidence            6999999999877666 7999999998753    344 343333222    222  234566666666665556666666


Q ss_pred             HHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCC-C
Q psy16851        162 MEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTG-P  240 (366)
Q Consensus       162 l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G-~  240 (366)
                      ..+-...-++++|++++|||+||++++|+++|...++.++.|+|...... |......   .....-+...| .|++| +
T Consensus        77 ~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~-~~~~~~~---~~~~~~~~~~~-~f~~GGa  151 (252)
T PF02434_consen   77 YEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDR-PIEIIHR---FNPNKSKDSGF-WFATGGA  151 (252)
T ss_dssp             HHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE---------------------------EE-GGG
T ss_pred             HHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCc-cceeecc---ccccccCcCce-EeeCCCe
Confidence            66544444678999999999999999999999999999999999876532 2211000   00000001111 37765 6


Q ss_pred             cccccHHHHHHHHHhhhcC--C-----CCCCCchhhHHHHHHh-CCCceeecCCcccCCCC---CCCCcc--CCeEEEec
Q psy16851        241 AYLFTSDVVSDVYTKALET--T-----YLKLEDVFTTGVVAQS-LKIKRQHVNEFFNKRIP---LNACTI--KKGISIHM  307 (366)
Q Consensus       241 gYvlS~d~~~~l~~~s~~~--~-----~~~~EDV~ltGi~~~~-~gi~~~~~~~f~~~~~~---~~~c~~--~~~it~H~  307 (366)
                      ||+||+.++++|.......  +     .-..||+.| |.|++. +||+.++.+.|+..+..   +.+-.+  +-.|++|.
T Consensus       152 G~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~l-G~ci~~~lgv~lt~s~~fhs~~~~l~~~~~~~l~~q~~~s~~~  230 (252)
T PF02434_consen  152 GYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTL-GYCIENLLGVPLTHSPLFHSHLENLQDYNPETLHRQVPISYHK  230 (252)
T ss_dssp             -EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHH-HHHHHHTT---EEE-TT---SSS-GGG--TTTGGG-SEEE-EE
T ss_pred             eHHHhHHHHHHHhhhcccccccCCcCCCCCcccChh-hhhHHhcCCcceeechhhcccCcccccCCHHHhccCCCeecCC
Confidence            9999999999996543322  1     123799998 999998 99999999999875422   222222  34688998


Q ss_pred             CC
Q psy16851        308 IK  309 (366)
Q Consensus       308 ~~  309 (366)
                      ..
T Consensus       231 ~~  232 (252)
T PF02434_consen  231 FE  232 (252)
T ss_dssp             ET
T ss_pred             Cc
Confidence            74

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246|consensus

Probab=99.75  E-value=7.7e-18  Score=166.67  Aligned_cols=168  Identities=19%  Similarity=0.281  Sum_probs=132.0

Q ss_pred             CCCceEEEEEEcCcCCHHHH-HHHHHHHhcccCCCCeeEEEEe---cCCCchhhhhHHHHhhhcCCeEEecccCCCCchH
Q psy16851         80 GDGLKILILITSALDHSEAR-SAIRQTWGHYNLRNDVAIAFVV---GIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLT  155 (366)
Q Consensus        80 ~~~~~Lli~V~Sap~~~~rR-~aIR~TW~~~~~~~~v~v~Fvl---G~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt  155 (366)
                      .++.++++.|+|++.+...| +++-+||++.+..    ..|+-   .+..           ..+. .|..+..|+|+++.
T Consensus        88 ~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~~----~~f~s~~~s~~~-----------~~f~-~v~~~~~~g~~~~~  151 (364)
T KOG2246|consen   88 SRSGRVLCWVLTSPMRHVTRADAVKETWLKRCDK----GIFFSPTLSKDD-----------SRFP-TVYYNLPDGYRSLW  151 (364)
T ss_pred             CCCceEEEEEEecCcCceeehhhhhcccccccCc----ceecCccCCCCC-----------CcCc-eeeccCCcchHHHH
Confidence            35789999999999887777 6999999998753    44543   3322           1122 33678899999999


Q ss_pred             HHHHHHHHHHHhh-CCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCC
Q psy16851        156 LKTVAMMEWIHDY-CPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFP  234 (366)
Q Consensus       156 ~Ktl~~l~w~~~~-c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP  234 (366)
                      .|+..+++++.++ -.+++|++|+|||||+.++||..+|.+.+|+++.|+|+....           |...         
T Consensus       152 ~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~~~-----------~~~~---------  211 (364)
T KOG2246|consen  152 RKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRSKS-----------YFQN---------  211 (364)
T ss_pred             HHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEecccccc-----------cccc---------
Confidence            9999999999854 467999999999999999999999999999999999986531           1100         


Q ss_pred             CCC-CCCcccccHHHHHHHHHhhhcC----CC-C--CCCchhhHHHHHHhCCCceeec
Q psy16851        235 DFT-TGPAYLFTSDVVSDVYTKALET----TY-L--KLEDVFTTGVVAQSLKIKRQHV  284 (366)
Q Consensus       235 ~Y~-~G~gYvlS~d~~~~l~~~s~~~----~~-~--~~EDV~ltGi~~~~~gi~~~~~  284 (366)
                      -|. +|+||++|+++.+.+++...+.    +. .  ..||+.| |.|++.+||...+.
T Consensus       212 ~y~~g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i-~~Cl~~~GV~~~d~  268 (364)
T KOG2246|consen  212 GYSSGGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRI-GRCLAEVGVPATDE  268 (364)
T ss_pred             ccccCCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHH-HHHHHHhCCCccCc
Confidence            144 5679999999999988776542    22 2  4899997 99999999988765

>PLN03153 hypothetical protein; Provisional

Probab=99.49  E-value=5.7e-13  Score=135.02  Aligned_cols=201  Identities=19%  Similarity=0.193  Sum_probs=125.8

Q ss_pred             eEEEEEEcCcCCHH-HHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCC---CCc---h--
Q psy16851         84 KILILITSALDHSE-ARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDS---YDN---L--  154 (366)
Q Consensus        84 ~Lli~V~Sap~~~~-rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~Ds---Y~N---l--  154 (366)
                      .++++|.++.+... |+..|+.+|.....+   ..+|+.....+.      .+...---| .+.-..+   |.|   .  
T Consensus       123 hIvF~I~~s~~~w~~R~~yik~wW~p~~~r---g~v~ld~~~~~~------~~~~~~P~i-~is~d~s~f~y~~~~Gh~s  192 (537)
T PLN03153        123 HIMFGIAGSSQLWKRRKELVRLWWRPNQMR---GHVWLEEQVSPE------EGDDSLPPI-MVSEDTSRFRYTNPTGHPS  192 (537)
T ss_pred             cEEEEEEEchhhhhhhhhhhhhhcCcccce---eEEEecccCCCC------CCcCCCCCE-EeCCCcccccccCCCCcHH
Confidence            68889998887664 558999999874322   245654433210      000000111 1110011   322   1  


Q ss_pred             HHHHH-HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCC
Q psy16851        155 TLKTV-AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMF  233 (366)
Q Consensus       155 t~Ktl-~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~y  233 (366)
                      ++-+. ++.+-+..+.|+++|++++|||||+.++||++.|.++++.++.|+|.........    ..+       .   |
T Consensus       193 a~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~~qn----~~f-------~---~  258 (537)
T PLN03153        193 GLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESHSAN----SYF-------S---H  258 (537)
T ss_pred             HHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEecccccccccc----ccc-------c---c
Confidence            12221 2333333446899999999999999999999999999999999999875432110    000       0   0


Q ss_pred             CCCC-CCCcccccHHHHHHHHHhhhcC----CCCCCCchhhHHHHHHhCCCceeecCCcccCCCCCCCCc------cCCe
Q psy16851        234 PDFT-TGPAYLFTSDVVSDVYTKALET----TYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNACT------IKKG  302 (366)
Q Consensus       234 P~Y~-~G~gYvlS~d~~~~l~~~s~~~----~~~~~EDV~ltGi~~~~~gi~~~~~~~f~~~~~~~~~c~------~~~~  302 (366)
                       .|+ +|+||+||+.+++.|.......    +...-+|..| |.|++.+||..++.++|+...+.-+...      ....
T Consensus       259 -~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL-~~CL~elGV~LT~~~gfhQ~D~~Gd~~G~les~p~~P~  336 (537)
T PLN03153        259 -NMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRL-HACITELGVPLSREPGFHQWDIRGNAHGLLSSHPIAPF  336 (537)
T ss_pred             -ccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHH-HHHHHHcCCCceecCCccccccCCCcchHhhcCCCCCc
Confidence             256 4569999999999987653222    2234688887 9999999999999999987543222221      1245


Q ss_pred             EEEecCCh
Q psy16851        303 ISIHMIKY  310 (366)
Q Consensus       303 it~H~~~p  310 (366)
                      +++|+.+.
T Consensus       337 vSlHH~~~  344 (537)
T PLN03153        337 VSIHHVEA  344 (537)
T ss_pred             eeeeeccc
Confidence            88887754

>KOG3708|consensus

Probab=97.91  E-value=2.4e-05  Score=79.36  Aligned_cols=201  Identities=15%  Similarity=0.217  Sum_probs=130.3

Q ss_pred             CCCceEEEEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHH-
Q psy16851         80 GDGLKILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKT-  158 (366)
Q Consensus        80 ~~~~~Lli~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Kt-  158 (366)
                      |.+-+|+++|+|..   .---||-+|-+....    ++.|+.+.+.-.            .|.-|...+--|+.-..|+ 
T Consensus        23 G~RErl~~aVmte~---tlA~a~NrT~ahhvp----rv~~F~~~~~i~------------~~~a~~~~vs~~d~r~~~~~   83 (681)
T KOG3708|consen   23 GTRERLMAAVMTES---TLALAINRTLAHHVP----RVHLFADSSRID------------NDLAQLTNVSPYDLRGQKTH   83 (681)
T ss_pred             hhHHHHHHHHHHHH---HHHHHHHHHHHhhcc----eeEEeecccccc------------ccHhhccccCccccCccccH
Confidence            34557899999932   566788888887654    467777776511            1111222222232223333 


Q ss_pred             HHHHHHHHhhC-CCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCC
Q psy16851        159 VAMMEWIHDYC-PDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFT  237 (366)
Q Consensus       159 l~~l~w~~~~c-~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~  237 (366)
                      -+.++++.+++ .+++|++-+-||+|||...|+..+...+-..++|+|.-..+      .++                =|
T Consensus        84 s~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~~~------gs~----------------rC  141 (681)
T KOG3708|consen   84 SMVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEAED------GSG----------------RC  141 (681)
T ss_pred             HHHHHHHHHhhccccceEEEecCcceecHHHHHHHHhhcccccccccchhhhC------ccC----------------cc
Confidence            45567777766 46999999999999999999999999988899999943221      111                27


Q ss_pred             CC-CcccccHHHHHHHHHhhhcCC---CCCCCchhhHHHHHHh-CCCceee----cCCccc-----CC---CC-C-CCCc
Q psy16851        238 TG-PAYLFTSDVVSDVYTKALETT---YLKLEDVFTTGVVAQS-LKIKRQH----VNEFFN-----KR---IP-L-NACT  298 (366)
Q Consensus       238 ~G-~gYvlS~d~~~~l~~~s~~~~---~~~~EDV~ltGi~~~~-~gi~~~~----~~~f~~-----~~---~~-~-~~c~  298 (366)
                      ++ .||+||+.++..+-..-....   .-.=.|+.+ |.|++. .|+..+.    +..|..     .+   ++ + ..-.
T Consensus       142 ~l~~G~LLS~s~l~~lrnnle~C~~~~lsad~d~~l-grCi~~At~v~C~~~hQGvrq~s~~~dspgr~~~~~e~~~s~a  220 (681)
T KOG3708|consen  142 RLDTGMLLSQSLLHALRNNLEGCRNDILSADPDEWL-GRCIQDATGVGCKPLHQGVRQYSEREDSPGRHDSIPEWEGSPA  220 (681)
T ss_pred             ccccceeecHHHHHHHHhhHHHhhcccccCCcHHHH-HHHHHHhhcCCccchhhhHHhhhHhhcCCCccccchhhcCChH
Confidence            54 699999999999976544333   334568997 999874 4665432    112211     01   11 0 1122


Q ss_pred             cCCeEEEecC-ChHHHHHHHHHhhc
Q psy16851        299 IKKGISIHMI-KYHEQFELWKKLLD  322 (366)
Q Consensus       299 ~~~~it~H~~-~p~em~~lW~~l~~  322 (366)
                      +++.+++|.+ +|.+|+.|++.+..
T Consensus       221 Fr~A~tv~pv~~p~d~yrLH~yfsr  245 (681)
T KOG3708|consen  221 FRSALTVHPVLSPADMYRLHKYFSR  245 (681)
T ss_pred             HhhhhccCccCCHHHHHHHHHHHHH
Confidence            5678999987 58899999887743

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=96.85  E-value=0.024  Score=51.47  Aligned_cols=189  Identities=13%  Similarity=0.080  Sum_probs=89.3

Q ss_pred             eEEEEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCe--EEecccCCCCch--HHHHH
Q psy16851         84 KILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDI--IQGNFVDSYDNL--TLKTV  159 (366)
Q Consensus        84 ~Lli~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DI--i~~df~DsY~Nl--t~Ktl  159 (366)
                      .+.|+|.+......-++.|+.--.+..  ..++++++...+.+...+.+.+-.+.++.+  ..+...   .|.  +.|. 
T Consensus         2 ~v~Vvip~~~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~---~~~g~~~k~-   75 (228)
T PF13641_consen    2 RVSVVIPAYNEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRP---RNPGPGGKA-   75 (228)
T ss_dssp             -EEEE--BSS-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE-------HHHHHHH-
T ss_pred             EEEEEEEecCCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecC---CCCCcchHH-
Confidence            355666655443444555554443321  236666666555444445565555666653  222211   222  2343 


Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc-CCCcceEeeeecCCCc--ccc----cCCCceeeCCCCCCC-C
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH-QNSKMTFFGRLAKKWR--PIR----KSSSKYYVSPVQYSP-N  231 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~-~~~~~~~~G~~~~~~~--P~R----~~~skwyvs~~~yp~-~  231 (366)
                      .++.++.+.. +.+|++.+|||+.+..+-|...+... .+.-..+.|.......  ...    .....|+..  ..+. .
T Consensus        76 ~a~n~~~~~~-~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  152 (228)
T PF13641_consen   76 RALNEALAAA-RGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLR--FRSGRR  152 (228)
T ss_dssp             HHHHHHHHH----SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTT--S-TT-B
T ss_pred             HHHHHHHHhc-CCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhh--hhhhhc
Confidence            3457777776 59999999999999988888777665 3333444444422110  000    000011110  0011 1


Q ss_pred             CCC-CCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        232 MFP-DFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       232 ~yP-~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .+. .++.|++.++.+++++.+-.-  . +....||..+ +.-+.+.|.+....+
T Consensus       153 ~~~~~~~~G~~~~~rr~~~~~~g~f--d-~~~~~eD~~l-~~r~~~~G~~~~~~~  203 (228)
T PF13641_consen  153 ALGVAFLSGSGMLFRRSALEEVGGF--D-PFILGEDFDL-CLRLRAAGWRIVYAP  203 (228)
T ss_dssp             ----S-B--TEEEEEHHHHHHH-S-----SSSSSHHHHH-HHHHHHTT--EEEEE
T ss_pred             ccceeeccCcEEEEEHHHHHHhCCC--C-CCCcccHHHH-HHHHHHCCCcEEEEC
Confidence            111 346799999999999998421  1 1445699997 888888887655433

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=96.69  E-value=0.032  Score=50.39  Aligned_cols=93  Identities=15%  Similarity=0.192  Sum_probs=55.1

Q ss_pred             EEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEE-----ecccCCCCchHHHHHHH
Q psy16851         87 ILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQ-----GNFVDSYDNLTLKTVAM  161 (366)
Q Consensus        87 i~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~-----~df~DsY~Nlt~Ktl~~  161 (366)
                      |.|.|-+...+||+.+.+.....    ++.+-|+-|.....+..  .+....+..-..     -...-+--.-++-.+..
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~----~~~~e~~~Avdg~~l~~--~~~~~~~~~~~~~~~~~~~lt~gEiGC~lSH~~~   77 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKL----GINFEFFDAVDGRDLSE--DELFRRYDPELFKKRYGRPLTPGEIGCALSHIKA   77 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc----CCceEEEEeecccccch--HHHHHHhhhhhhhccccccCCcceEeehhhHHHH
Confidence            56788888999999998887654    34566776665422211  011111111110     01111111225666777


Q ss_pred             HHHHHhhCCCcceEEEeCCCceechH
Q psy16851        162 MEWIHDYCPDTHFILKTDDDMFINVP  187 (366)
Q Consensus       162 l~w~~~~c~~~~fvlK~DDD~fVn~~  187 (366)
                      ++-+.+.  +.++.+-..||+.++.+
T Consensus        78 w~~~v~~--~~~~~lIlEDDv~~~~~  101 (200)
T PF01755_consen   78 WQRIVDS--GLEYALILEDDVIFDPD  101 (200)
T ss_pred             HHHHHHc--CCCeEEEEecccccccc
Confidence            7777764  58999999999999854

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.44  E-value=0.55  Score=39.50  Aligned_cols=84  Identities=19%  Similarity=0.212  Sum_probs=54.8

Q ss_pred             CcceEEEeCCCceechHHHHHHHHhcCC-CcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHH
Q psy16851        171 DTHFILKTDDDMFINVPKLLTFLVKHQN-SKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVV  249 (366)
Q Consensus       171 ~~~fvlK~DDD~fVn~~~L~~~L~~~~~-~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~  249 (366)
                      +.+|++.+|||..+..+.+...++.... .+-..++..                             +.|++.+++++++
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~  124 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-----------------------------VSGAFLLVRREVF  124 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-----------------------------CceeeEeeeHHHH
Confidence            6899999999999998888887764321 122222221                             5788999999999


Q ss_pred             HHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        250 SDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       250 ~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      +.+-.-... .....||..+ ..-+...|.+....+
T Consensus       125 ~~~~~~~~~-~~~~~eD~~~-~~~~~~~g~~i~~~~  158 (166)
T cd04186         125 EEVGGFDED-FFLYYEDVDL-CLRARLAGYRVLYVP  158 (166)
T ss_pred             HHcCCCChh-hhccccHHHH-HHHHHHcCCeEEEcc
Confidence            876311111 1126689887 666666666554433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=95.36  E-value=1.1  Score=44.92  Aligned_cols=162  Identities=10%  Similarity=0.064  Sum_probs=83.9

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcC---CeEEecccCCCCchHHHH---HHHHHHHHhhCCCcceEEEeCCCceechH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYG---DIIQGNFVDSYDNLTLKT---VAMMEWIHDYCPDTHFILKTDDDMFINVP  187 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~---DIi~~df~DsY~Nlt~Kt---l~~l~w~~~~c~~~~fvlK~DDD~fVn~~  187 (366)
                      ..+++++-..+.+...+.+++=.+.+.   .+......+.-.+...|.   -.+++.+.+.+++.+|++.+|+|+.+..+
T Consensus        70 ~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~  149 (384)
T TIGR03469        70 KLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPD  149 (384)
T ss_pred             ceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChh
Confidence            367787777666333222322223343   444443322212223443   34556655555558999999999999988


Q ss_pred             HHHHHHHhcCCCc-ceEeeeecCCCcccccCCCceeeC------CCCCCC------CCCCCCCCCCcccccHHHHHHHHH
Q psy16851        188 KLLTFLVKHQNSK-MTFFGRLAKKWRPIRKSSSKYYVS------PVQYSP------NMFPDFTTGPAYLFTSDVVSDVYT  254 (366)
Q Consensus       188 ~L~~~L~~~~~~~-~~~~G~~~~~~~P~R~~~skwyvs------~~~yp~------~~yP~Y~~G~gYvlS~d~~~~l~~  254 (366)
                      .|.+.+......+ ....|.......   ....+..++      ...+|.      .....++.|++.++++++.+++--
T Consensus       150 ~l~~lv~~~~~~~~~~vs~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGG  226 (384)
T TIGR03469       150 NLARLVARARAEGLDLVSLMVRLRCE---SFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERIGG  226 (384)
T ss_pred             HHHHHHHHHHhCCCCEEEecccccCC---CHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHcCC
Confidence            8877776543222 222222211000   000000000      000000      011235679999999999998821


Q ss_pred             hhhcCCCCCCCchhhHHHHHHhCCCc
Q psy16851        255 KALETTYLKLEDVFTTGVVAQSLKIK  280 (366)
Q Consensus       255 ~s~~~~~~~~EDV~ltGi~~~~~gi~  280 (366)
                      - ........||+.+ +.-+++.|.+
T Consensus       227 f-~~~~~~~~ED~~L-~~r~~~~G~~  250 (384)
T TIGR03469       227 I-AAIRGALIDDCTL-AAAVKRSGGR  250 (384)
T ss_pred             H-HHHhhCcccHHHH-HHHHHHcCCc
Confidence            1 1122235799998 8888887743

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=95.17  E-value=0.91  Score=40.41  Aligned_cols=135  Identities=13%  Similarity=0.019  Sum_probs=79.6

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCC--eEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGD--IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLT  191 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~D--Ii~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~  191 (366)
                      .+++++|...+.+...+.+++-.+.+..  +......... ....|.- .+..+.+.+ +.+|++.+|+|+.+..+.|..
T Consensus        30 ~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~  106 (196)
T cd02520          30 KYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKV-GINPKVN-NLIKGYEEA-RYDILVISDSDISVPPDYLRR  106 (196)
T ss_pred             CeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHH-HHHHHHHhC-CCCEEEEECCCceEChhHHHH
Confidence            4678888777764333444444455543  3222111111 1223432 344555555 689999999999998888777


Q ss_pred             HHHhcC-CCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhH
Q psy16851        192 FLVKHQ-NSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTT  270 (366)
Q Consensus       192 ~L~~~~-~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~lt  270 (366)
                      .+.... +.-..+.|.                             ++.|++.++.+++.+.+---. .......||..+ 
T Consensus       107 l~~~~~~~~~~~v~~~-----------------------------~~~g~~~~~r~~~~~~~ggf~-~~~~~~~eD~~l-  155 (196)
T cd02520         107 MVAPLMDPGVGLVTCL-----------------------------CAFGKSMALRREVLDAIGGFE-AFADYLAEDYFL-  155 (196)
T ss_pred             HHHHhhCCCCCeEEee-----------------------------cccCceeeeEHHHHHhccChH-HHhHHHHHHHHH-
Confidence            776532 222222221                             567899999999999873221 112234699997 


Q ss_pred             HHHHHhCCCcee
Q psy16851        271 GVVAQSLKIKRQ  282 (366)
Q Consensus       271 Gi~~~~~gi~~~  282 (366)
                      +.-+...|.+..
T Consensus       156 ~~rl~~~G~~i~  167 (196)
T cd02520         156 GKLIWRLGYRVV  167 (196)
T ss_pred             HHHHHHcCCeEE
Confidence            777777775543

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.80  E-value=1.6  Score=39.00  Aligned_cols=157  Identities=13%  Similarity=-0.001  Sum_probs=81.1

Q ss_pred             eeEEEEecCCCchhhhhHHHHhhh--cCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851        115 VAIAFVVGIGSDSGNQIVSEESNL--YGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF  192 (366)
Q Consensus       115 v~v~FvlG~~~~~~~~~l~~E~~~--y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~  192 (366)
                      +.++.+-+.+.+...+.+. +...  +..+....... -.|.. |. .++.++.+.+ +.+|++.+|+|..+..+-|...
T Consensus        29 ~eiivvdd~s~d~t~~~~~-~~~~~~~~~v~~~~~~~-~~~~g-~~-~a~n~g~~~~-~~d~i~~~D~D~~~~~~~l~~l  103 (229)
T cd04192          29 FEVILVDDHSTDGTVQILE-FAAAKPNFQLKILNNSR-VSISG-KK-NALTTAIKAA-KGDWIVTTDADCVVPSNWLLTF  103 (229)
T ss_pred             eEEEEEcCCCCcChHHHHH-HHHhCCCcceEEeeccC-cccch-hH-HHHHHHHHHh-cCCEEEEECCCcccCHHHHHHH
Confidence            5677666665533333344 2222  23344454443 22322 32 3456666665 6899999999999998777777


Q ss_pred             HHhcC-CCcceEeeeecCCCccc----ccCCCceeeC---CCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCC
Q psy16851        193 LVKHQ-NSKMTFFGRLAKKWRPI----RKSSSKYYVS---PVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKL  264 (366)
Q Consensus       193 L~~~~-~~~~~~~G~~~~~~~P~----R~~~skwyvs---~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~  264 (366)
                      +.... +....+.|..... .+.    +...-.+...   ........+|..+.|+++++++++.+.+---. .......
T Consensus       104 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~-~~~~~~~  181 (229)
T cd04192         104 VAFIQKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGGFE-GNDHIAS  181 (229)
T ss_pred             HHHhhcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcCCc-ccccccc
Confidence            76432 2334555554322 000    0000000000   00011223455667889999999999883211 1123456


Q ss_pred             CchhhHHHHHHhCCC
Q psy16851        265 EDVFTTGVVAQSLKI  279 (366)
Q Consensus       265 EDV~ltGi~~~~~gi  279 (366)
                      ||..+ +.-+...|.
T Consensus       182 eD~~~-~~~~~~~g~  195 (229)
T cd04192         182 GDDEL-LLAKVASKY  195 (229)
T ss_pred             CCHHH-HHHHHHhCC
Confidence            77765 554444443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.71  E-value=1.1  Score=39.52  Aligned_cols=169  Identities=13%  Similarity=0.113  Sum_probs=84.6

Q ss_pred             HHHHHHHhcccC--CCCeeEEEEecCCCchhhhhHHHHhhhcC-CeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEE
Q psy16851        100 SAIRQTWGHYNL--RNDVAIAFVVGIGSDSGNQIVSEESNLYG-DIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFIL  176 (366)
Q Consensus       100 ~aIR~TW~~~~~--~~~v~v~FvlG~~~~~~~~~l~~E~~~y~-DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvl  176 (366)
                      +.|.+++.+-..  ...++++++-..+.+...+.+++-+..++ .+.......+. ...    ..+..+...+ +.+|++
T Consensus        11 ~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~-G~~----~~~n~g~~~~-~g~~v~   84 (214)
T cd04196          11 KYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNL-GVA----RNFESLLQAA-DGDYVF   84 (214)
T ss_pred             HHHHHHHHHHHhCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCc-cHH----HHHHHHHHhC-CCCEEE
Confidence            345555544221  12567777766555433344444444443 23333333322 222    2333344444 689999


Q ss_pred             EeCCCceechHHHHHHHHh-cCCCc-ceEeeeecC--CCcccccCCCceeeCC----CCCCCCCCCCCCCCCcccccHHH
Q psy16851        177 KTDDDMFINVPKLLTFLVK-HQNSK-MTFFGRLAK--KWRPIRKSSSKYYVSP----VQYSPNMFPDFTTGPAYLFTSDV  248 (366)
Q Consensus       177 K~DDD~fVn~~~L~~~L~~-~~~~~-~~~~G~~~~--~~~P~R~~~skwyvs~----~~yp~~~yP~Y~~G~gYvlS~d~  248 (366)
                      ..|+|.....+.|...+.. ..... ..+.|....  ....... ...+....    ..+.......++.|+++++.+++
T Consensus        85 ~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  163 (214)
T cd04196          85 FCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIG-ESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNREL  163 (214)
T ss_pred             EECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcc-cccccccccCCccCHHHHHHhCccCCceeeEEHHH
Confidence            9999999988888877765 22223 334443221  1111000 01110000    00111112245678899999999


Q ss_pred             HHHHHHhhhcCCCCCCCchhhHHHHHHhCC
Q psy16851        249 VSDVYTKALETTYLKLEDVFTTGVVAQSLK  278 (366)
Q Consensus       249 ~~~l~~~s~~~~~~~~EDV~ltGi~~~~~g  278 (366)
                      ++.+..-...  ....||.++ .+.+...|
T Consensus       164 ~~~~~~~~~~--~~~~~D~~~-~~~~~~~~  190 (214)
T cd04196         164 LELALPFPDA--DVIMHDWWL-ALLASAFG  190 (214)
T ss_pred             HHhhcccccc--ccccchHHH-HHHHHHcC
Confidence            9987532221  156889886 66555543

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=94.65  E-value=3.3  Score=37.48  Aligned_cols=162  Identities=14%  Similarity=0.031  Sum_probs=84.3

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      ..+++.+.+.+.+...+.++...+.+..+....-..    .. + -.++..+.+.. +.+|++.+|||..+..+-|...+
T Consensus        31 ~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~----~~-~-~~a~N~g~~~a-~~d~v~~lD~D~~~~~~~l~~~~  103 (249)
T cd02525          31 LIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK----RI-Q-SAGLNIGIRNS-RGDIIIRVDAHAVYPKDYILELV  103 (249)
T ss_pred             ccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC----CC-c-hHHHHHHHHHh-CCCEEEEECCCccCCHHHHHHHH
Confidence            456777766666544455555544444444333221    11 1 13466666654 68999999999999887777777


Q ss_pred             HhcCC-CcceEeeeecCC-Cccccc-----CCCceeeCCCCCCCCCC--CCCCCCCcccccHHHHHHHHHhhhcCCCCCC
Q psy16851        194 VKHQN-SKMTFFGRLAKK-WRPIRK-----SSSKYYVSPVQYSPNMF--PDFTTGPAYLFTSDVVSDVYTKALETTYLKL  264 (366)
Q Consensus       194 ~~~~~-~~~~~~G~~~~~-~~P~R~-----~~skwyvs~~~yp~~~y--P~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~  264 (366)
                      ..... ......|..... ..+...     ..+.+......+.....  =.++.|++.++++++.+++.-  ........
T Consensus       104 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~  181 (249)
T cd02525         104 EALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKVGG--FDESLVRN  181 (249)
T ss_pred             HHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHhCC--CCcccCcc
Confidence            54322 223344443221 111100     00000000000000000  014567788899999887732  22223457


Q ss_pred             CchhhHHHHHHhCCCceeecC
Q psy16851        265 EDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       265 EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      ||..+ +.-+.+.|.+....+
T Consensus       182 eD~~l-~~r~~~~G~~~~~~~  201 (249)
T cd02525         182 EDAEL-NYRLRKAGYKIWLSP  201 (249)
T ss_pred             chhHH-HHHHHHcCcEEEEcC
Confidence            99987 777777776655443

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=94.56  E-value=0.41  Score=40.42  Aligned_cols=116  Identities=9%  Similarity=0.088  Sum_probs=72.3

Q ss_pred             EEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhh-hHHHHhhhcCC-eEEecccCCCCchHHHHHHHHHH
Q psy16851         87 ILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQ-IVSEESNLYGD-IIQGNFVDSYDNLTLKTVAMMEW  164 (366)
Q Consensus        87 i~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~-~l~~E~~~y~D-Ii~~df~DsY~Nlt~Ktl~~l~w  164 (366)
                      |.|.|-+...+||..+++.....    ++.+-|+-|....++.. .+......+.. ....+...+--.-.+..+..++-
T Consensus         2 i~vInL~~~~~Rr~~~~~~~~~~----~~~~~~~~Avd~~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~~w~~   77 (128)
T cd06532           2 IFVINLDRSTDRRERMEAQLAAL----GLDFEFFDAVDGKDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYKLWQK   77 (128)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc----CCCeEEEeccccccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHHHHHH
Confidence            46778888999999999866543    34567777765522221 12111110000 00111122222234566677777


Q ss_pred             HHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccc
Q psy16851        165 IHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLF  244 (366)
Q Consensus       165 ~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvl  244 (366)
                      +.+.  +.++.+-..||+.+..+                                                  ...||++
T Consensus        78 ~~~~--~~~~alIlEDDv~~~~~--------------------------------------------------~~~~Y~v  105 (128)
T cd06532          78 IVES--NLEYALILEDDAILDPD--------------------------------------------------GTAGYLV  105 (128)
T ss_pred             HHHc--CCCeEEEEccCcEECCC--------------------------------------------------CceEEEe
Confidence            7663  57999999999999876                                                  3358999


Q ss_pred             cHHHHHHHHHhhhc
Q psy16851        245 TSDVVSDVYTKALE  258 (366)
Q Consensus       245 S~d~~~~l~~~s~~  258 (366)
                      |+++|++++.....
T Consensus       106 s~~~A~~ll~~~~~  119 (128)
T cd06532         106 SRKGAKKLLAALEP  119 (128)
T ss_pred             CHHHHHHHHHhCCC
Confidence            99999999987654

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=94.47  E-value=1.4  Score=43.95  Aligned_cols=189  Identities=11%  Similarity=0.065  Sum_probs=96.8

Q ss_pred             EEEEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCC--eEEecccCCCCchHHHHHHHH
Q psy16851         85 ILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGD--IIQGNFVDSYDNLTLKTVAMM  162 (366)
Q Consensus        85 Lli~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~D--Ii~~df~DsY~Nlt~Ktl~~l  162 (366)
                      +-|+|........-.+.|+ +..+.. .+..+++++...+++...+.+++=.+.|.+  |..+.-.+. .....|.-+..
T Consensus        43 VSViiP~~nee~~l~~~L~-Sl~~q~-Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~-~G~~~K~~~l~  119 (373)
T TIGR03472        43 VSVLKPLHGDEPELYENLA-SFCRQD-YPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARR-HGPNRKVSNLI  119 (373)
T ss_pred             eEEEEECCCCChhHHHHHH-HHHhcC-CCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCC-CCCChHHHHHH
Confidence            4444444333322334443 232221 234778887766653333333333455666  322211111 12234654443


Q ss_pred             HHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCc-ceEeeeecCCCcccccCCCc---eeeCCCCCCC------CC
Q psy16851        163 EWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSK-MTFFGRLAKKWRPIRKSSSK---YYVSPVQYSP------NM  232 (366)
Q Consensus       163 ~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~-~~~~G~~~~~~~P~R~~~sk---wyvs~~~yp~------~~  232 (366)
                      + +.+.+ +.+|++.+|+|+.+..+-|...+......+ ....|... . .+.....++   ..+....+|.      ..
T Consensus       120 ~-~~~~a-~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  195 (373)
T TIGR03472       120 N-MLPHA-RHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYR-G-RPVPGFWSRLGAMGINHNFLPSVMVARALG  195 (373)
T ss_pred             H-HHHhc-cCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEecccc-C-CCCCCHHHHHHHHHhhhhhhHHHHHHHhcc
Confidence            3 45554 689999999999999888888776653222 33333221 1 111100000   0111111110      01


Q ss_pred             CCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCcee
Q psy16851        233 FPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ  282 (366)
Q Consensus       233 yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~  282 (366)
                      -+.+|.|.++++.+++.+.+--- ......-.||..+ |.-+.+.|.+..
T Consensus       196 ~~~~~~G~~~a~RR~~l~~iGGf-~~~~~~~~ED~~l-~~~i~~~G~~v~  243 (373)
T TIGR03472       196 RARFCFGATMALRRATLEAIGGL-AALAHHLADDYWL-GELVRALGLRVV  243 (373)
T ss_pred             CCccccChhhheeHHHHHHcCCh-HHhcccchHHHHH-HHHHHHcCCeEE
Confidence            13468899999999999988421 1112223599997 998888887654

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=94.04  E-value=2.1  Score=39.55  Aligned_cols=162  Identities=17%  Similarity=0.094  Sum_probs=87.5

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCC--eEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGD--IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLT  191 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~D--Ii~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~  191 (366)
                      .+.++++-..+.+...+.+++-.+.|++  +....-..   |.. | -.+++.+.+.. +.+|++.+|+|..+.++.|..
T Consensus        40 ~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~---n~G-~-~~a~n~g~~~a-~g~~i~~lD~D~~~~~~~l~~  113 (243)
T PLN02726         40 DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPG---KLG-L-GTAYIHGLKHA-SGDFVVIMDADLSHHPKYLPS  113 (243)
T ss_pred             CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCC---CCC-H-HHHHHHHHHHc-CCCEEEEEcCCCCCCHHHHHH
Confidence            5677887776664444444443445553  22222111   222 1 13445555544 589999999999999988877


Q ss_pred             HHHhcC-CCcceEeeeecCCC------cccccCCC---ceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCC
Q psy16851        192 FLVKHQ-NSKMTFFGRLAKKW------RPIRKSSS---KYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTY  261 (366)
Q Consensus       192 ~L~~~~-~~~~~~~G~~~~~~------~P~R~~~s---kwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~  261 (366)
                      .+.... ..-..+.|......      ...|.-.+   .+.... .. .... +.++|+..++++++++.+...... . 
T Consensus       114 l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~-~~~~-~d~~g~~~~~rr~~~~~i~~~~~~-~-  188 (243)
T PLN02726        114 FIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQT-LL-WPGV-SDLTGSFRLYKRSALEDLVSSVVS-K-  188 (243)
T ss_pred             HHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHHH-Hh-CCCC-CcCCCcccceeHHHHHHHHhhccC-C-
Confidence            776542 23456677543211      01111000   010000 00 0011 235677889999999999643221 1 


Q ss_pred             CCCCchhhHHHHHHhCCCceeecCCc
Q psy16851        262 LKLEDVFTTGVVAQSLKIKRQHVNEF  287 (366)
Q Consensus       262 ~~~EDV~ltGi~~~~~gi~~~~~~~f  287 (366)
                      ....|..+ .+.+...|.+....|.-
T Consensus       189 ~~~~~~el-~~~~~~~g~~i~~vp~~  213 (243)
T PLN02726        189 GYVFQMEI-IVRASRKGYRIEEVPIT  213 (243)
T ss_pred             CcEEehHH-HHHHHHcCCcEEEeCcE
Confidence            22346665 77777888877776643

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=93.71  E-value=0.41  Score=39.96  Aligned_cols=156  Identities=15%  Similarity=0.072  Sum_probs=75.2

Q ss_pred             EEEEEcCcCCHHHH-HHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHH
Q psy16851         86 LILITSALDHSEAR-SAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEW  164 (366)
Q Consensus        86 li~V~Sap~~~~rR-~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w  164 (366)
                      +|.+.-.+....+- +.+++.     .....+++++-..+.+...+.+++-.+....+......+.. .+    -.++..
T Consensus         3 vip~~n~~~~l~~~l~sl~~q-----~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~-g~----~~~~n~   72 (169)
T PF00535_consen    3 VIPTYNEAEYLERTLESLLKQ-----TDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENL-GF----SAARNR   72 (169)
T ss_dssp             EEEESS-TTTHHHHHHHHHHH-----SGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS-HH----HHHHHH
T ss_pred             EEEeeCCHHHHHHHHHHHhhc-----cCCCEEEEEeccccccccccccccccccccccccccccccc-cc----cccccc
Confidence            34444444555444 456666     12345677666666544444444444334455555544433 22    234445


Q ss_pred             HHhhCCCcceEEEeCCCceechHHHHHHHHhcCC-CcceEeeeecCCCccc---ccCCC--ceeeC-C--CCCCCCCCCC
Q psy16851        165 IHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SKMTFFGRLAKKWRPI---RKSSS--KYYVS-P--VQYSPNMFPD  235 (366)
Q Consensus       165 ~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~-~~~~~~G~~~~~~~P~---R~~~s--kwyvs-~--~~yp~~~yP~  235 (366)
                      +.++. ..+|++.+|||.++..+.|...++.... ....++|.........   .....  .+... .  .......--+
T Consensus        73 ~~~~a-~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (169)
T PF00535_consen   73 GIKHA-KGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKIS  151 (169)
T ss_dssp             HHHH---SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSS
T ss_pred             ccccc-ceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcc
Confidence            55554 4679999999999998765555544322 2344555433211110   00000  00000 0  0000111225


Q ss_pred             CCCCCcccccHHHHHHH
Q psy16851        236 FTTGPAYLFTSDVVSDV  252 (366)
Q Consensus       236 Y~~G~gYvlS~d~~~~l  252 (366)
                      ++.|++.++++++.+++
T Consensus       152 ~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen  152 FFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             EESSSCEEEEEHHHHHC
T ss_pred             cccccEEEEEHHHHHhh
Confidence            77889999999998865

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=93.62  E-value=4.1  Score=38.94  Aligned_cols=164  Identities=10%  Similarity=-0.010  Sum_probs=81.1

Q ss_pred             eeEEEEecCCCchhhhhHHHH-hhh-cCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851        115 VAIAFVVGIGSDSGNQIVSEE-SNL-YGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF  192 (366)
Q Consensus       115 v~v~FvlG~~~~~~~~~l~~E-~~~-y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~  192 (366)
                      ..++.|-..+.+.....+.++ ... +..+-.+....+ .+..    .+...+.+.. ..+|++.+|+|+.+..+-|...
T Consensus        31 ~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n-~G~~----~a~N~g~~~A-~gd~i~fLD~D~~~~~~wL~~l  104 (299)
T cd02510          31 KEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKR-EGLI----RARIAGARAA-TGDVLVFLDSHCEVNVGWLEPL  104 (299)
T ss_pred             CEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCC-CCHH----HHHHHHHHHc-cCCEEEEEeCCcccCccHHHHH
Confidence            467777666653332233221 222 233433332222 2222    3455555554 6899999999999987666666


Q ss_pred             HHhcCCCcceEe-eeecCC---------Ccc-cccC-----CCceeeCCC-----CCC-CCCCCCCCCCCcccccHHHHH
Q psy16851        193 LVKHQNSKMTFF-GRLAKK---------WRP-IRKS-----SSKYYVSPV-----QYS-PNMFPDFTTGPAYLFTSDVVS  250 (366)
Q Consensus       193 L~~~~~~~~~~~-G~~~~~---------~~P-~R~~-----~skwyvs~~-----~yp-~~~yP~Y~~G~gYvlS~d~~~  250 (366)
                      +.........++ |.+...         ..+ .+..     ...|.....     ..+ ....-+++.|+++++++++..
T Consensus       105 l~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~  184 (299)
T cd02510         105 LARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFL  184 (299)
T ss_pred             HHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHH
Confidence            654322222222 221100         000 0000     001110000     001 112235678999999999999


Q ss_pred             HHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        251 DVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       251 ~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .+---.........||+-+ ..=+..+|-+....+
T Consensus       185 ~vGgfDe~~~~~~~ED~Dl-~~R~~~~G~~i~~~p  218 (299)
T cd02510         185 ELGGYDEGMDIWGGENLEL-SFKVWQCGGSIEIVP  218 (299)
T ss_pred             HhCCCCCcccccCchhHHH-HHHHHHcCCeEEEee
Confidence            8832111222334699987 666677787665544

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=93.53  E-value=1.6  Score=40.01  Aligned_cols=184  Identities=11%  Similarity=0.039  Sum_probs=87.8

Q ss_pred             eEEEEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHH
Q psy16851         84 KILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMME  163 (366)
Q Consensus        84 ~Lli~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~  163 (366)
                      .+-|+|.+.-....-...|+.-..+........++++...+.+...+.+.+-.+.  .+....-.+   |.. | ..++.
T Consensus        30 ~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~---~~g-~-~~a~n  102 (251)
T cd06439          30 TVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPE---RRG-K-AAALN  102 (251)
T ss_pred             EEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCC---CCC-h-HHHHH
Confidence            4555555544333344556555554322222566666555543333333222222  233332222   222 3 23455


Q ss_pred             HHHhhCCCcceEEEeCCCceechHHHHHHHHhcC-CCcceEeeeecCCCcc--cccCCCceeeCC--CCCC-CCCCCCCC
Q psy16851        164 WIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQ-NSKMTFFGRLAKKWRP--IRKSSSKYYVSP--VQYS-PNMFPDFT  237 (366)
Q Consensus       164 w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~-~~~~~~~G~~~~~~~P--~R~~~skwyvs~--~~yp-~~~yP~Y~  237 (366)
                      .+.+.. ..+|++.+|+|+.+..+-|.+.+.... +.-..+.|........  .+.....|....  ..+. ....+..+
T Consensus       103 ~gi~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (251)
T cd06439         103 RALALA-TGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTVGA  181 (251)
T ss_pred             HHHHHc-CCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCeeee
Confidence            566555 469999999999999777777776653 2223444543321110  000000000000  0000 00112345


Q ss_pred             CCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCcee
Q psy16851        238 TGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ  282 (366)
Q Consensus       238 ~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~  282 (366)
                      .|+++.+.+++.+.      .......||..+ +..+...|....
T Consensus       182 ~g~~~~~rr~~~~~------~~~~~~~eD~~l-~~~~~~~G~~~~  219 (251)
T cd06439         182 NGAIYAIRRELFRP------LPADTINDDFVL-PLRIARQGYRVV  219 (251)
T ss_pred             cchHHHhHHHHhcC------CCcccchhHHHH-HHHHHHcCCeEE
Confidence            67777777776651      112234699886 777777775544

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=93.51  E-value=4.8  Score=36.15  Aligned_cols=116  Identities=12%  Similarity=0.024  Sum_probs=64.1

Q ss_pred             HHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCC-Cc-ceEeeeecC-CCcc----ccc--CCCceeeCCCCCCC-C
Q psy16851        162 MEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SK-MTFFGRLAK-KWRP----IRK--SSSKYYVSPVQYSP-N  231 (366)
Q Consensus       162 l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~-~~-~~~~G~~~~-~~~P----~R~--~~skwyvs~~~yp~-~  231 (366)
                      +..+.+.. +.+|++.+|+|+++..+.|...+..... .+ ....|.... ...+    .+.  .....+...-.... .
T Consensus        76 ~n~~~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (234)
T cd06421          76 LNNALAHT-TGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDR  154 (234)
T ss_pred             HHHHHHhC-CCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhh
Confidence            44555544 6899999999999999888887775533 22 223332211 1000    000  00000000000000 0


Q ss_pred             CCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCcee
Q psy16851        232 MFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ  282 (366)
Q Consensus       232 ~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~  282 (366)
                      ....++.|++.++++++.+.+.--   ......||..+ +.-+.+.|.+..
T Consensus       155 ~~~~~~~g~~~~~r~~~~~~ig~~---~~~~~~eD~~l-~~r~~~~g~~i~  201 (234)
T cd06421         155 WGAAFCCGSGAVVRREALDEIGGF---PTDSVTEDLAT-SLRLHAKGWRSV  201 (234)
T ss_pred             cCCceecCceeeEeHHHHHHhCCC---CccceeccHHH-HHHHHHcCceEE
Confidence            113567899999999999887321   12344799997 887777776543

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.38  E-value=3.2  Score=36.69  Aligned_cols=136  Identities=11%  Similarity=-0.010  Sum_probs=73.7

Q ss_pred             eeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHH
Q psy16851        115 VAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLV  194 (366)
Q Consensus       115 v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~  194 (366)
                      .+++.+-+.+.+...+.+++..+.+. +....... ......-.-.+++++.  ..+.+|++..|||..+..+.|...+.
T Consensus        27 ~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~-n~g~~~~~n~~~~~a~--~~~~d~v~~ld~D~~~~~~~l~~l~~  102 (202)
T cd04185          27 DHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPE-NLGGAGGFYEGVRRAY--ELGYDWIWLMDDDAIPDPDALEKLLA  102 (202)
T ss_pred             ceEEEEECCCCcchHHHHHHhcCCCc-eEEEECcc-ccchhhHHHHHHHHHh--ccCCCEEEEeCCCCCcChHHHHHHHH
Confidence            45555555554444444444443333 22222222 1122222234556665  24689999999999999877776665


Q ss_pred             hcC-CCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHH
Q psy16851        195 KHQ-NSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVV  273 (366)
Q Consensus       195 ~~~-~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~  273 (366)
                      ... +.-..+.|.....       .+                  .++|.++++++++.+--. ...-....||+.+ +.-
T Consensus       103 ~~~~~~~~~~~~~~~~~-------~~------------------~~~~~~~~~~~~~~~g~~-~~~~~~~~eD~~~-~~r  155 (202)
T cd04185         103 YADKDNPQFLAPLVLDP-------DG------------------SFVGVLISRRVVEKIGLP-DKEFFIWGDDTEY-TLR  155 (202)
T ss_pred             HHhcCCceEecceeEcC-------CC------------------ceEEEEEeHHHHHHhCCC-ChhhhccchHHHH-HHH
Confidence            543 2222333332211       00                  335688999998877211 1111245699997 887


Q ss_pred             HHhCCCce
Q psy16851        274 AQSLKIKR  281 (366)
Q Consensus       274 ~~~~gi~~  281 (366)
                      +.+.|...
T Consensus       156 ~~~~G~~i  163 (202)
T cd04185         156 ASKAGPGI  163 (202)
T ss_pred             HHHcCCcE
Confidence            87777655

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=93.36  E-value=2.1  Score=35.58  Aligned_cols=148  Identities=14%  Similarity=0.054  Sum_probs=73.0

Q ss_pred             HHHHHHHhcccCC--CCeeEEEEecCCCchhhhhHHHHhhhcCC-eEEecccCCCCchHHHHHHHHHHHHhhCCCcceEE
Q psy16851        100 SAIRQTWGHYNLR--NDVAIAFVVGIGSDSGNQIVSEESNLYGD-IIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFIL  176 (366)
Q Consensus       100 ~aIR~TW~~~~~~--~~v~v~FvlG~~~~~~~~~l~~E~~~y~D-Ii~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvl  176 (366)
                      +.|++|-.+-...  ....++.+-..+.+...+.+.++...+.. ++.....   .|.. | ...+.++.+.+ +.+|++
T Consensus        10 ~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~---~~~g-~-~~~~n~~~~~~-~~~~i~   83 (180)
T cd06423          10 AVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDK---ENGG-K-AGALNAGLRHA-KGDIVV   83 (180)
T ss_pred             HHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEec---ccCC-c-hHHHHHHHHhc-CCCEEE
Confidence            4555555543222  24566666555554444445444444322 2222211   1211 1 34556666666 799999


Q ss_pred             EeCCCceechHHHHHHHHhcC--CCcceEeeeecCCCc---ccccCC----CceeeCCCCC-CCCCCCCCCCCCcccccH
Q psy16851        177 KTDDDMFINVPKLLTFLVKHQ--NSKMTFFGRLAKKWR---PIRKSS----SKYYVSPVQY-SPNMFPDFTTGPAYLFTS  246 (366)
Q Consensus       177 K~DDD~fVn~~~L~~~L~~~~--~~~~~~~G~~~~~~~---P~R~~~----skwyvs~~~y-p~~~yP~Y~~G~gYvlS~  246 (366)
                      .+|+|..+..+.|...+....  +.-..+.|.......   ......    ..+....... ........+.|.++++++
T Consensus        84 ~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  163 (180)
T cd06423          84 VLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRR  163 (180)
T ss_pred             EECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecceeecCchHHHHHH
Confidence            999999998777777644432  222233333321110   110000    0001000000 112334567889999999


Q ss_pred             HHHHHHH
Q psy16851        247 DVVSDVY  253 (366)
Q Consensus       247 d~~~~l~  253 (366)
                      ++++.+-
T Consensus       164 ~~~~~~g  170 (180)
T cd06423         164 EALREVG  170 (180)
T ss_pred             HHHHHhC
Confidence            9998763

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=93.33  E-value=4.1  Score=35.25  Aligned_cols=121  Identities=10%  Similarity=-0.059  Sum_probs=68.5

Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc--CCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCC
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH--QNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFT  237 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~  237 (366)
                      .+++.+.+.+ +.+|++.+|+|..+..+.+...+...  .+...+++|........... ...+..............++
T Consensus        65 ~a~n~~~~~a-~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  142 (202)
T cd06433          65 DAMNKGIALA-TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRV-IGRRRPPPFLDKFLLYGMPI  142 (202)
T ss_pred             HHHHHHHHHc-CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCc-ccCCCCcchhhhHHhhcCcc
Confidence            4556666766 68999999999999988888877332  23345666654321110000 01100001111111233566


Q ss_pred             CCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        238 TGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       238 ~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .|++.++++++.+.+-.  ....+...||..+ .+-+...|......+
T Consensus       143 ~~~~~~~~~~~~~~~~~--f~~~~~~~~D~~~-~~r~~~~g~~~~~~~  187 (202)
T cd06433         143 CHQATFFRRSLFEKYGG--FDESYRIAADYDL-LLRLLLAGKIFKYLP  187 (202)
T ss_pred             cCcceEEEHHHHHHhCC--CchhhCchhhHHH-HHHHHHcCCceEecc
Confidence            78889999999988742  1112334578876 666666676554433

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=92.70  E-value=3.8  Score=37.65  Aligned_cols=117  Identities=10%  Similarity=0.071  Sum_probs=64.7

Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCC--CcceEee-eecCCCcccccCCCceeeC------C---CC
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN--SKMTFFG-RLAKKWRPIRKSSSKYYVS------P---VQ  227 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~--~~~~~~G-~~~~~~~P~R~~~skwyvs------~---~~  227 (366)
                      .+++.+.++. +.+|++.+|+|+.+..+.|.+.+.....  .+-.+.| .+.....+. ....+.+..      .   ..
T Consensus        74 ~a~n~g~~~a-~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  151 (241)
T cd06427          74 KACNYALAFA-RGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARE-NWLTRMFALEYAAWFDYLLPG  151 (241)
T ss_pred             HHHHHHHHhc-CCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCc-cHHHHHHHHHHHHHHHHHHHH
Confidence            4566777765 6799999999999999988888776532  1222332 221110000 000000000      0   00


Q ss_pred             CCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCcee
Q psy16851        228 YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQ  282 (366)
Q Consensus       228 yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~  282 (366)
                      ......+..+.|++.++++++++.+.-.   -+....||..+ ++=+...|.+..
T Consensus       152 ~~~~~~~~~~~g~~~~~rr~~~~~vgg~---~~~~~~eD~~l-~~rl~~~G~r~~  202 (241)
T cd06427         152 LARLGLPIPLGGTSNHFRTDVLRELGGW---DPFNVTEDADL-GLRLARAGYRTG  202 (241)
T ss_pred             HHhcCCeeecCCchHHhhHHHHHHcCCC---CcccchhhHHH-HHHHHHCCceEE
Confidence            0001222345788899999999887321   12234799997 776666665544

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=92.20  E-value=3.3  Score=37.35  Aligned_cols=157  Identities=13%  Similarity=0.028  Sum_probs=79.1

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      ..+++++...+.+...+.+ ++...+..+.... .+.    .-|.- ++..+.+.. +.+|++.+|+|+.+..+.|...+
T Consensus        28 ~~eiivvdd~s~d~~~~~l-~~~~~~~~~~v~~-~~~----~g~~~-a~n~g~~~a-~~d~v~~lD~D~~~~~~~l~~l~   99 (235)
T cd06434          28 PLEIIVVTDGDDEPYLSIL-SQTVKYGGIFVIT-VPH----PGKRR-ALAEGIRHV-TTDIVVLLDSDTVWPPNALPEML   99 (235)
T ss_pred             CCEEEEEeCCCChHHHHHH-HhhccCCcEEEEe-cCC----CChHH-HHHHHHHHh-CCCEEEEECCCceeChhHHHHHH
Confidence            3466666666654433333 3455566665543 221    12332 334444443 78999999999999999888888


Q ss_pred             HhcCCCc-ceEeeeecC-CC--cccccCCCceeeC-------CCCCCCCCCCCCCCCCcccccHHHHHHHHHhhh-----
Q psy16851        194 VKHQNSK-MTFFGRLAK-KW--RPIRKSSSKYYVS-------PVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKAL-----  257 (366)
Q Consensus       194 ~~~~~~~-~~~~G~~~~-~~--~P~R~~~skwyvs-------~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~-----  257 (366)
                      ......+ ....|.... +.  .+.... ...+..       ........ -..+.|++.++.+++++.+.-...     
T Consensus       100 ~~~~~~~v~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~~~rr~~l~~~~~~~~~~~~~  177 (235)
T cd06434         100 KPFEDPKVGGVGTNQRILRPRDSKWSFL-AAEYLERRNEEIRAAMSYDGG-VPCLSGRTAAYRTEILKDFLFLEEFTNET  177 (235)
T ss_pred             HhccCCCEeEEcCceEeecCcccHHHHH-HHHHHHHHHHHHHHHHhhCCC-EEEccCcHHHHHHHHHhhhhhHHHhhhhh
Confidence            7664222 222222211 00  000000 000000       00000000 023567788889988877542211     


Q ss_pred             --cCCCCCCCchhhHHHHHHhCCCce
Q psy16851        258 --ETTYLKLEDVFTTGVVAQSLKIKR  281 (366)
Q Consensus       258 --~~~~~~~EDV~ltGi~~~~~gi~~  281 (366)
                        ..+...-||..+ +.-+.+.|.+.
T Consensus       178 ~~~~~~~~~eD~~l-~~~~~~~g~~~  202 (235)
T cd06434         178 FMGRRLNAGDDRFL-TRYVLSHGYKT  202 (235)
T ss_pred             hcCCCCCcCchHHH-HHHHHHCCCeE
Confidence              123456799997 55555555543

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>PRK11204 N-glycosyltransferase; Provisional

Probab=91.21  E-value=14  Score=37.15  Aligned_cols=181  Identities=12%  Similarity=0.055  Sum_probs=95.0

Q ss_pred             ceEEEEEEcCcCCHHHHHHHHHHHhccc--CCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHH
Q psy16851         83 LKILILITSALDHSEARSAIRQTWGHYN--LRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVA  160 (366)
Q Consensus        83 ~~Lli~V~Sap~~~~rR~aIR~TW~~~~--~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~  160 (366)
                      +.+-|+|.+--+.    +.|++|-.+-.  .....+++.+...+.+...+.+++.++.+..+......+   |.. | -.
T Consensus        54 p~vsViIp~yne~----~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~---n~G-k-a~  124 (420)
T PRK11204         54 PGVSILVPCYNEG----ENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAE---NQG-K-AN  124 (420)
T ss_pred             CCEEEEEecCCCH----HHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCC---CCC-H-HH
Confidence            3455555554332    33444443321  122455555544444444455555566666665544332   332 4 34


Q ss_pred             HHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc--CCCcceEeeeecCCCcccccCCCceeeC--CCCCCC------
Q psy16851        161 MMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH--QNSKMTFFGRLAKKWRPIRKSSSKYYVS--PVQYSP------  230 (366)
Q Consensus       161 ~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~~~G~~~~~~~P~R~~~skwyvs--~~~yp~------  230 (366)
                      +++.+.+.+ +.+|++..|+|+.+..+.|.+.++..  +++-....|....     ++..+ |.-.  ..+|..      
T Consensus       125 aln~g~~~a-~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~  197 (420)
T PRK11204        125 ALNTGAAAA-RSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRI-----RNRST-LLGRIQVGEFSSIIGLIK  197 (420)
T ss_pred             HHHHHHHHc-CCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCcee-----ccchh-HHHHHHHHHHHHhhhHHH
Confidence            566677765 78999999999999998888777654  2222222232111     11100 0000  000000      


Q ss_pred             ---CC--CCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceee
Q psy16851        231 ---NM--FPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQH  283 (366)
Q Consensus       231 ---~~--yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~  283 (366)
                         ..  .+..++|.+.++++++++.+--   ..+..-.||+.+ +.-+.+.|.+...
T Consensus       198 ~~~~~~~~~~~~~G~~~~~rr~~l~~vgg---~~~~~~~ED~~l-~~rl~~~G~~i~~  251 (420)
T PRK11204        198 RAQRVYGRVFTVSGVITAFRKSALHEVGY---WSTDMITEDIDI-SWKLQLRGWDIRY  251 (420)
T ss_pred             HHHHHhCCceEecceeeeeeHHHHHHhCC---CCCCcccchHHH-HHHHHHcCCeEEe
Confidence               00  1123468888999999987621   112234699997 8888777765543

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=90.14  E-value=2.7  Score=36.49  Aligned_cols=133  Identities=15%  Similarity=0.112  Sum_probs=71.7

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      .+.++.+-+.+.+...+.++...+++..+.......++.    | -.+++.+.+.+ ..+|++.+|+|.....+.|...+
T Consensus        29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G----~-~~a~n~g~~~a-~~d~i~~~D~D~~~~~~~l~~l~  102 (181)
T cd04187          29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFG----Q-QAALLAGLDHA-RGDAVITMDADLQDPPELIPEML  102 (181)
T ss_pred             CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCC----c-HHHHHHHHHhc-CCCEEEEEeCCCCCCHHHHHHHH
Confidence            456676666665333333444444555555444433221    2 24445555555 46999999999999887777777


Q ss_pred             HhcCCCcceEeeeecCCCcc-cccCCCcee--eCCCCCCCCCCCCCCCCCcccccHHHHHHHHH
Q psy16851        194 VKHQNSKMTFFGRLAKKWRP-IRKSSSKYY--VSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYT  254 (366)
Q Consensus       194 ~~~~~~~~~~~G~~~~~~~P-~R~~~skwy--vs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~  254 (366)
                      ..........+|.......+ .+.-.++.+  +.....  ...-+...|+.+++++++++.+..
T Consensus       103 ~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~i~~  164 (181)
T cd04187         103 AKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKLS--GVDIPDNGGDFRLMDRKVVDALLL  164 (181)
T ss_pred             HHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHHc--CCCCCCCCCCEEEEcHHHHHHHHh
Confidence            65544456667765432211 000000000  000000  111134567788999999998863

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=90.09  E-value=0.5  Score=44.83  Aligned_cols=71  Identities=11%  Similarity=0.066  Sum_probs=48.9

Q ss_pred             CCCcccccHHHHHHHHHhhhc----CCCCCCCchhhHHHHHHhCCCceeecCCcccCCCCCCCC------ccCCeEEEec
Q psy16851        238 TGPAYLFTSDVVSDVYTKALE----TTYLKLEDVFTTGVVAQSLKIKRQHVNEFFNKRIPLNAC------TIKKGISIHM  307 (366)
Q Consensus       238 ~G~gYvlS~d~~~~l~~~s~~----~~~~~~EDV~ltGi~~~~~gi~~~~~~~f~~~~~~~~~c------~~~~~it~H~  307 (366)
                      +|+|+.||..+|+.|.+....    .+.+.--|-.| ..|+.++|+..+..++|+...+.-+.-      .....++.|+
T Consensus        12 GGgG~~iS~pLa~~L~~~~d~C~~r~~~~~g~D~~i-~~C~~~lgv~LT~e~g~hQ~Di~Gd~~G~~~a~~~~pl~SlHH   90 (255)
T PF04646_consen   12 GGGGFAISYPLAKALAKMQDDCIERYPHLYGGDQRI-QACIAELGVPLTKEPGFHQMDIRGDPSGFLEAHPLAPLVSLHH   90 (255)
T ss_pred             cCceeEEcHHHHHHHHHHHHHHHHhcCCCCCchHHH-HHHHHHhCCCceecCCceeEeeccCcceeeecCCCCceeeeee
Confidence            688999999999999875332    34444456666 999999999999999997643221111      1124578887


Q ss_pred             CC
Q psy16851        308 IK  309 (366)
Q Consensus       308 ~~  309 (366)
                      .+
T Consensus        91 ~~   92 (255)
T PF04646_consen   91 WD   92 (255)
T ss_pred             hh
Confidence            63

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=89.70  E-value=15  Score=33.07  Aligned_cols=122  Identities=15%  Similarity=0.049  Sum_probs=63.4

Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHH--Hh-cC-CCcceEeeeecCC-Cccccc---CCCceeeCCCCCCCC
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL--VK-HQ-NSKMTFFGRLAKK-WRPIRK---SSSKYYVSPVQYSPN  231 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L--~~-~~-~~~~~~~G~~~~~-~~P~R~---~~skwyvs~~~yp~~  231 (366)
                      .+++++...  +++|++..|+|+.+..+.|...+  .. .. ...-..+|..... ......   ....|..........
T Consensus        66 ~g~~~a~~~--~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (237)
T cd02526          66 IGIKAALEN--GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEE  143 (237)
T ss_pred             HHHHHHHhC--CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccC
Confidence            344544432  58999999999999988888774  22 21 1122333332211 110000   000111000001011


Q ss_pred             C--CCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        232 M--FPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       232 ~--yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .  -..++.|+|.++++++.+.+---... -....||+.+ ++-+.+.|.+....+
T Consensus       144 ~~~~~~~~~~~~~~~rr~~~~~~ggfd~~-~~~~~eD~d~-~~r~~~~G~~~~~~~  197 (237)
T cd02526         144 GLKEVDFLITSGSLISLEALEKVGGFDED-LFIDYVDTEW-CLRARSKGYKIYVVP  197 (237)
T ss_pred             CceEeeeeeccceEEcHHHHHHhCCCCHH-HcCccchHHH-HHHHHHcCCcEEEEc
Confidence            1  12355678889999998887311111 1245689997 777778887665544

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=88.42  E-value=0.85  Score=40.74  Aligned_cols=125  Identities=12%  Similarity=0.077  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCC-CcceEeeeecCCCcccccCCC---ceeeC--CCCCC
Q psy16851        156 LKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQN-SKMTFFGRLAKKWRPIRKSSS---KYYVS--PVQYS  229 (366)
Q Consensus       156 ~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~-~~~~~~G~~~~~~~P~R~~~s---kwyvs--~~~yp  229 (366)
                      -|.-.+...+.+. .+.++++..|+|+.|+.+-|.+.+..... .-.+.-| +... .|.+.-.+   .-++.  ...+.
T Consensus        17 ~Kv~nL~~~~~~~-a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~-~~~~-~~~~~~~~~l~~~~~~~~~~~~~   93 (175)
T PF13506_consen   17 PKVNNLAQGLEAG-AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTG-LPRG-VPARGFWSRLEAAFFNFLPGVLQ   93 (175)
T ss_pred             hHHHHHHHHHHhh-CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEe-cccc-cCCcCHHHHHHHHHHhHHHHHHH
Confidence            4655555544432 47899999999999999988888776543 3233323 2211 11111000   00110  00000


Q ss_pred             CCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        230 PNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       230 ~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .-.-.+++.|+.+++.+++++.+- ........--||..+ |..+.+.|.+..-.+
T Consensus        94 a~~~~~~~~G~~m~~rr~~L~~~G-G~~~l~~~ladD~~l-~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen   94 ALGGAPFAWGGSMAFRREALEEIG-GFEALADYLADDYAL-GRRLRARGYRVVLSP  147 (175)
T ss_pred             HhcCCCceecceeeeEHHHHHHcc-cHHHHhhhhhHHHHH-HHHHHHCCCeEEEcc
Confidence            011347899999999999999872 111122345899997 999999898766544

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=87.99  E-value=16  Score=31.28  Aligned_cols=97  Identities=10%  Similarity=0.003  Sum_probs=58.2

Q ss_pred             HHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCCCC
Q psy16851        161 MMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGP  240 (366)
Q Consensus       161 ~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~  240 (366)
                      +++.+.+.+ ..+|++..|+|..+..+-|...++...+ ...+.|.......+..    .              ....|+
T Consensus        70 ~~n~g~~~a-~g~~i~~lD~D~~~~~~~l~~~~~~~~~-~~~v~g~~~~~~~~~~----~--------------~~~~~~  129 (182)
T cd06420          70 IRNKAIAAA-KGDYLIFIDGDCIPHPDFIADHIELAEP-GVFLSGSRVLLNEKLT----E--------------RGIRGC  129 (182)
T ss_pred             HHHHHHHHh-cCCEEEEEcCCcccCHHHHHHHHHHhCC-CcEEecceeecccccc----e--------------eEeccc
Confidence            345555554 6899999999999988877777766532 3344443321111100    0              244677


Q ss_pred             cccccHHHHHHHHHhhhcCCC--CCCCchhhHHHHHHhCCCc
Q psy16851        241 AYLFTSDVVSDVYTKALETTY--LKLEDVFTTGVVAQSLKIK  280 (366)
Q Consensus       241 gYvlS~d~~~~l~~~s~~~~~--~~~EDV~ltGi~~~~~gi~  280 (366)
                      ++.+.++....+.  .....+  ...||+.+ +.=+.+.|+.
T Consensus       130 ~~~~~r~~~~~~g--gf~~~~~~~~~eD~~l-~~r~~~~g~~  168 (182)
T cd06420         130 NMSFWKKDLLAVN--GFDEEFTGWGGEDSEL-VARLLNSGIK  168 (182)
T ss_pred             eEEEEHHHHHHhC--CCCcccccCCcchHHH-HHHHHHcCCc
Confidence            8888888877542  122222  24799987 7767777743

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=87.63  E-value=18  Score=36.96  Aligned_cols=76  Identities=12%  Similarity=0.184  Sum_probs=45.0

Q ss_pred             eeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHH
Q psy16851        115 VAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLV  194 (366)
Q Consensus       115 v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~  194 (366)
                      +.++.+-+.+.++..+.+++-.+.+..+... ..+.  | .-| -.+++++.+++ +.+|++.+|+|..+..+.|.+.+.
T Consensus        81 ~eIiVVDd~StD~T~~il~~~~~~~~~v~v~-~~~~--~-~Gk-a~AlN~gl~~s-~g~~v~~~DaD~~~~~d~L~~l~~  154 (439)
T TIGR03111        81 IDIILANNQSTDDSFQVFCRAQNEFPGLSLR-YMNS--D-QGK-AKALNAAIYNS-IGKYIIHIDSDGKLHKDAIKNMVT  154 (439)
T ss_pred             eEEEEEECCCChhHHHHHHHHHHhCCCeEEE-EeCC--C-CCH-HHHHHHHHHHc-cCCEEEEECCCCCcChHHHHHHHH
Confidence            5555555554443333333333445544221 1222  2 124 34567777765 689999999999999988888776


Q ss_pred             hc
Q psy16851        195 KH  196 (366)
Q Consensus       195 ~~  196 (366)
                      ..
T Consensus       155 ~f  156 (439)
T TIGR03111       155 RF  156 (439)
T ss_pred             HH
Confidence            54

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=87.57  E-value=6.4  Score=35.17  Aligned_cols=160  Identities=15%  Similarity=0.036  Sum_probs=86.5

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCe-EEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDI-IQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF  192 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DI-i~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~  192 (366)
                      ..+++.+-+.+.+...+.+++..+.++.. .......   |.. |. .++..+.+.+ ..+|++.+|+|.....+.+...
T Consensus        30 ~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~---n~G-~~-~a~~~g~~~a-~gd~i~~ld~D~~~~~~~l~~l  103 (211)
T cd04188          30 SYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPK---NRG-KG-GAVRAGMLAA-RGDYILFADADLATPFEELEKL  103 (211)
T ss_pred             CEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEccc---CCC-cH-HHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHH
Confidence            46777776666644445555555666654 2233222   221 21 3444455555 5699999999999999988888


Q ss_pred             HHh-cCCCcceEeeeecCCC-------cccccCCCcee--eCCCCCCCCCCCCC--CCCCcccccHHHHHHHHHhhhcCC
Q psy16851        193 LVK-HQNSKMTFFGRLAKKW-------RPIRKSSSKYY--VSPVQYSPNMFPDF--TTGPAYLFTSDVVSDVYTKALETT  260 (366)
Q Consensus       193 L~~-~~~~~~~~~G~~~~~~-------~P~R~~~skwy--vs~~~yp~~~yP~Y--~~G~gYvlS~d~~~~l~~~s~~~~  260 (366)
                      ++. ........+|......       ...|.-.++.+  ...-.    .-+++  +..+..++++.+++.+..... ..
T Consensus       104 ~~~~~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~g~~~~~r~~~~~~~~~~~-~~  178 (211)
T cd04188         104 EEALKTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFLVRLL----LGLGIKDTQCGFKLFTRDAARRLFPRLH-LE  178 (211)
T ss_pred             HHHHhccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHHHHHH----cCCCCcccccCceeEcHHHHHHHHhhhh-cc
Confidence            876 3344466777644221       01111000000  00000    00112  133568999999999863321 22


Q ss_pred             CCCCCchhhHHHHHHhCCCceeecCC
Q psy16851        261 YLKLEDVFTTGVVAQSLKIKRQHVNE  286 (366)
Q Consensus       261 ~~~~EDV~ltGi~~~~~gi~~~~~~~  286 (366)
                      . ..+|..+ -..+.+.|.+...++-
T Consensus       179 ~-~~~d~el-~~r~~~~g~~~~~vpi  202 (211)
T cd04188         179 R-WAFDVEL-LVLARRLGYPIEEVPV  202 (211)
T ss_pred             c-eEeeHHH-HHHHHHcCCeEEEcCc
Confidence            2 3458886 5556667876666653

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=87.56  E-value=23  Score=36.16  Aligned_cols=152  Identities=13%  Similarity=0.099  Sum_probs=84.4

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      +.+++.+...+.+...+.+++..+.+..+.......   |.. | -.+++.+.+.+ +.+|++..|+|+.+..+.|...+
T Consensus       104 ~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~---n~G-k-a~AlN~gl~~a-~~d~iv~lDAD~~~~~d~L~~lv  177 (444)
T PRK14583        104 NIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAH---NQG-K-AIALRMGAAAA-RSEYLVCIDGDALLDKNAVPYLV  177 (444)
T ss_pred             CeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCC---CCC-H-HHHHHHHHHhC-CCCEEEEECCCCCcCHHHHHHHH
Confidence            567666665555444445555556666654433222   322 4 34566666665 68999999999999999888777


Q ss_pred             Hhc--CCCcceEeeeecCCCcccccCCC---ceeeCCCCCCC---------CCC-CC-CCCCCcccccHHHHHHHHHhhh
Q psy16851        194 VKH--QNSKMTFFGRLAKKWRPIRKSSS---KYYVSPVQYSP---------NMF-PD-FTTGPAYLFTSDVVSDVYTKAL  257 (366)
Q Consensus       194 ~~~--~~~~~~~~G~~~~~~~P~R~~~s---kwyvs~~~yp~---------~~y-P~-Y~~G~gYvlS~d~~~~l~~~s~  257 (366)
                      ...  +++-...-|...     .++..+   +...  .+|..         ..| +. .++|.+..+.+++++++--.. 
T Consensus       178 ~~~~~~~~~g~v~g~~~-----~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~vGg~~-  249 (444)
T PRK14583        178 APLIANPRTGAVTGNPR-----IRTRSTLIGRVQV--GEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWS-  249 (444)
T ss_pred             HHHHhCCCeEEEEccce-----ecCCCcchhhHHH--HHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHHcCCCC-
Confidence            643  222222333211     111110   0000  00000         001 12 346778899999988873211 


Q ss_pred             cCCCCCCCchhhHHHHHHhCCCcee
Q psy16851        258 ETTYLKLEDVFTTGVVAQSLKIKRQ  282 (366)
Q Consensus       258 ~~~~~~~EDV~ltGi~~~~~gi~~~  282 (366)
                        +..-.||..+ |+-+...|.+..
T Consensus       250 --~~~i~ED~dl-~~rl~~~G~~i~  271 (444)
T PRK14583        250 --PDMITEDIDI-SWKLQLKHWSVF  271 (444)
T ss_pred             --CCcccccHHH-HHHHHHcCCeEE
Confidence              2234699997 988887776543

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=86.89  E-value=5.8  Score=34.17  Aligned_cols=131  Identities=14%  Similarity=0.080  Sum_probs=70.1

Q ss_pred             eeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHH
Q psy16851        115 VAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLV  194 (366)
Q Consensus       115 v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~  194 (366)
                      ..++.+...+.+...+.+..-.+.+..+.......+..    | -.++..+.+.. ..+|++.+|+|..+..+.|.+.+.
T Consensus        29 ~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G----~-~~a~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~~  102 (185)
T cd04179          29 YEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFG----K-GAAVRAGFKAA-RGDIVVTMDADLQHPPEDIPKLLE  102 (185)
T ss_pred             EEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCC----c-cHHHHHHHHHh-cCCEEEEEeCCCCCCHHHHHHHHH
Confidence            45565555554444444555555566654444444332    1 23445555544 459999999999999888888887


Q ss_pred             h-cCCCcceEeeeecCCC----cc-cccCCCceeeC--CCCCCCCCCCCCCCCCcccccHHHHHHHH
Q psy16851        195 K-HQNSKMTFFGRLAKKW----RP-IRKSSSKYYVS--PVQYSPNMFPDFTTGPAYLFTSDVVSDVY  253 (366)
Q Consensus       195 ~-~~~~~~~~~G~~~~~~----~P-~R~~~skwyvs--~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~  253 (366)
                      . .......+.|......    .+ .+.- ..+...  .... ...-.....|+.+++++++++.+.
T Consensus       103 ~~~~~~~~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~i~  167 (185)
T cd04179         103 KLLEGGADVVIGSRFVRGGGAGMPLLRRL-GSRLFNFLIRLL-LGVRISDTQSGFRLFRREVLEALL  167 (185)
T ss_pred             HHhccCCcEEEEEeecCCCcccchHHHHH-HHHHHHHHHHHH-cCCCCcCCCCceeeeHHHHHHHHH
Confidence            5 3444566777643221    11 1100 000000  0000 001113446677889999999985

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=85.71  E-value=19  Score=31.50  Aligned_cols=156  Identities=10%  Similarity=-0.026  Sum_probs=76.3

Q ss_pred             eeEEEEecCC-CchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        115 VAIAFVVGIG-SDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       115 v~v~FvlG~~-~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      ..++++.-.+ .+...+.+.+-.+.+. +.......   |.- + -.++..+...+ +.+|++.+|+|.++..+.|...+
T Consensus        30 ~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~---n~G-~-~~a~N~g~~~a-~gd~i~~lD~Dd~~~~~~l~~~~  102 (201)
T cd04195          30 DEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEK---NRG-L-GKALNEGLKHC-TYDWVARMDTDDISLPDRFEKQL  102 (201)
T ss_pred             cEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCc---ccc-H-HHHHHHHHHhc-CCCEEEEeCCccccCcHHHHHHH
Confidence            4555554333 2444433444344455 44333322   211 1 12455566655 68999999999999988887777


Q ss_pred             HhcC--CCcceEeeeecCCCcccccCCCceeeCCC-----CCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCc
Q psy16851        194 VKHQ--NSKMTFFGRLAKKWRPIRKSSSKYYVSPV-----QYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED  266 (366)
Q Consensus       194 ~~~~--~~~~~~~G~~~~~~~P~R~~~skwyvs~~-----~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~ED  266 (366)
                      ....  +.-.++.|.........+....+. .+..     .+....  ....|++.++.+++++.+--   ..+....||
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~rr~~~~~~g~---~~~~~~~eD  176 (201)
T cd04195         103 DFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LPTSHDDILKFARRR--SPFNHPTVMFRKSKVLAVGG---YQDLPLVED  176 (201)
T ss_pred             HHHHhCCCeEEEcccEEEECCCCCeecccc-CCCCHHHHHHHhccC--CCCCChHHhhhHHHHHHcCC---cCCCCCchH
Confidence            6532  222344443321100000000000 0000     000000  11245667777777766521   112356899


Q ss_pred             hhhHHHHHHhCCCceeec
Q psy16851        267 VFTTGVVAQSLKIKRQHV  284 (366)
Q Consensus       267 V~ltGi~~~~~gi~~~~~  284 (366)
                      ..+ ..-+...|.+..+.
T Consensus       177 ~~~-~~r~~~~g~~~~~~  193 (201)
T cd04195         177 YAL-WARMLANGARFANL  193 (201)
T ss_pred             HHH-HHHHHHcCCceecc
Confidence            986 77777667655443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=85.65  E-value=27  Score=31.48  Aligned_cols=160  Identities=10%  Similarity=0.020  Sum_probs=81.4

Q ss_pred             CeeEEEEecCCC-chhhhhHHHHhhhcC-CeEEecccCCCCchHHHHHHHHHHHHhhCC-CcceEEEeCCCceechHHHH
Q psy16851        114 DVAIAFVVGIGS-DSGNQIVSEESNLYG-DIIQGNFVDSYDNLTLKTVAMMEWIHDYCP-DTHFILKTDDDMFINVPKLL  190 (366)
Q Consensus       114 ~v~v~FvlG~~~-~~~~~~l~~E~~~y~-DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~-~~~fvlK~DDD~fVn~~~L~  190 (366)
                      ..+++++-+.+. .+..+.+++=.+.++ ++......   .|...| ..++.++.+.+. +.+|++.+|+|+.+..+.|.
T Consensus        28 ~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~---~~~G~~-~~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~  103 (236)
T cd06435          28 NFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVE---PLPGAK-AGALNYALERTAPDAEIIAVIDADYQVEPDWLK  103 (236)
T ss_pred             CcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcC---CCCCCc-hHHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHH
Confidence            456766665555 333222221112222 34333222   223323 345677777663 47999999999999998888


Q ss_pred             HHHHhcCCCc-ceEeeeecC-C--CcccccCCCce-----eeC-CCCCCCCCCCCCCCCCcccccHHHHHHHHHhhhcCC
Q psy16851        191 TFLVKHQNSK-MTFFGRLAK-K--WRPIRKSSSKY-----YVS-PVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETT  260 (366)
Q Consensus       191 ~~L~~~~~~~-~~~~G~~~~-~--~~P~R~~~skw-----yvs-~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~  260 (366)
                      +.+......+ .++.|.... .  ..+... ...|     +.+ ........ -.++.|++.++++++.+.+--  .. .
T Consensus       104 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~rr~~~~~iGg--f~-~  178 (236)
T cd06435         104 RLVPIFDDPRVGFVQAPQDYRDGEESLFKR-MCYAEYKGFFDIGMVSRNERN-AIIQHGTMCLIRRSALDDVGG--WD-E  178 (236)
T ss_pred             HHHHHhcCCCeeEEecCccccCCCccHHHH-HHhHHHHHHHHHHhccccccC-ceEEecceEEEEHHHHHHhCC--CC-C
Confidence            8877654222 222222111 0  001100 0001     000 00000000 125678889999999998732  11 2


Q ss_pred             CCCCCchhhHHHHHHhCCCceee
Q psy16851        261 YLKLEDVFTTGVVAQSLKIKRQH  283 (366)
Q Consensus       261 ~~~~EDV~ltGi~~~~~gi~~~~  283 (366)
                      .+..||.-+ +.=+.+.|.+...
T Consensus       179 ~~~~eD~dl-~~r~~~~G~~~~~  200 (236)
T cd06435         179 WCITEDSEL-GLRMHEAGYIGVY  200 (236)
T ss_pred             ccccchHHH-HHHHHHCCcEEEE
Confidence            235799997 7777777765443

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=85.64  E-value=35  Score=32.80  Aligned_cols=193  Identities=15%  Similarity=0.116  Sum_probs=100.2

Q ss_pred             eEEEEEEcCcCCHHHHHHHHHHHhcccCCCCeeEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHH
Q psy16851         84 KILILITSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMM  162 (366)
Q Consensus        84 ~Lli~V~Sap~~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l  162 (366)
                      .+-++|.|-..-....+.++..=.+...  ...++ ++-..+ +...+.+....  +.++..+...++..- ..=.-.++
T Consensus         4 ~i~~iiv~yn~~~~l~~~l~~l~~~~~~--~~~iv-~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG~-agg~n~g~   77 (305)
T COG1216           4 KISIIIVTYNRGEDLVECLASLAAQTYP--DDVIV-VVDNGSTDGSLEALKARF--FPNVRLIENGENLGF-AGGFNRGI   77 (305)
T ss_pred             ceEEEEEecCCHHHHHHHHHHHhcCCCC--CcEEE-EccCCCCCCCHHHHHhhc--CCcEEEEEcCCCccc-hhhhhHHH
Confidence            3444555443333444555544333221  22233 334333 33333333322  678876665554321 11111456


Q ss_pred             HHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCC-cceEeeeecCC----Cccccc------CCCce-eeCCCCCCC
Q psy16851        163 EWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNS-KMTFFGRLAKK----WRPIRK------SSSKY-YVSPVQYSP  230 (366)
Q Consensus       163 ~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~-~~~~~G~~~~~----~~P~R~------~~skw-yvs~~~yp~  230 (366)
                      +.+...-  .+|++..++|+.+..+.|.+.++..... ...+.|.....    ..+.+.      ....| .....+.+.
T Consensus        78 ~~a~~~~--~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (305)
T COG1216          78 KYALAKG--DDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAP  155 (305)
T ss_pred             HHHhcCC--CcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheeccccccccccceecccccccc
Confidence            6665532  2299999999999988888888654322 23334433221    011110      01122 222222222


Q ss_pred             C-----CCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecCC
Q psy16851        231 N-----MFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVNE  286 (366)
Q Consensus       231 ~-----~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~~  286 (366)
                      .     ..-+++.|++.++++++.+++-- ...--++..||+-+ +.=+.++|....-.+.
T Consensus       156 ~~~~~~~~~~~~~G~~~li~~~~~~~vG~-~de~~F~y~eD~D~-~~R~~~~G~~i~~~p~  214 (305)
T COG1216         156 DLSSYLEVVASLSGACLLIRREAFEKVGG-FDERFFIYYEDVDL-CLRARKAGYKIYYVPD  214 (305)
T ss_pred             cccchhhhhhhcceeeeEEcHHHHHHhCC-CCcccceeehHHHH-HHHHHHcCCeEEEeec
Confidence            1     12225789999999999999954 11222568999997 8888889976554443

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=85.13  E-value=2.5  Score=37.26  Aligned_cols=107  Identities=15%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             eEEEeCCCceechHHHHHHHHhcC-CCcceEeeeecCCCcccccCCCceeeCCC---C---C---CCCCCCCCCCCCccc
Q psy16851        174 FILKTDDDMFINVPKLLTFLVKHQ-NSKMTFFGRLAKKWRPIRKSSSKYYVSPV---Q---Y---SPNMFPDFTTGPAYL  243 (366)
Q Consensus       174 fvlK~DDD~fVn~~~L~~~L~~~~-~~~~~~~G~~~~~~~P~R~~~skwyvs~~---~---y---p~~~yP~Y~~G~gYv  243 (366)
                      ||+.+|+|+-+..+-|.+.+.... ++-...-|.+...  +..+.-.++.....   .   .   ..-..+.++.|++.+
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~   78 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFR--NRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML   78 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEec--CCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence            789999999999988888776654 2222333333221  10000011111110   0   0   012345678999999


Q ss_pred             ccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        244 FTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       244 lS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      +++++++++.--.  -+..-.||..+ |.=+.+.|.+....+
T Consensus        79 ~r~~~l~~vg~~~--~~~~~~ED~~l-~~~l~~~G~~~~~~~  117 (193)
T PF13632_consen   79 FRREALREVGGFD--DPFSIGEDMDL-GFRLRRAGYRIVYVP  117 (193)
T ss_pred             eeHHHHHHhCccc--ccccccchHHH-HHHHHHCCCEEEEec
Confidence            9999999884221  23455699997 888888886554433

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=84.97  E-value=27  Score=30.96  Aligned_cols=116  Identities=9%  Similarity=-0.083  Sum_probs=60.0

Q ss_pred             HHHHHhhCCCcceEEEeCCCceechHHHHHHHHh-cCCCcceEeeeecCCCcccccCCC----------ceeeCCCCCCC
Q psy16851        162 MEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVK-HQNSKMTFFGRLAKKWRPIRKSSS----------KYYVSPVQYSP  230 (366)
Q Consensus       162 l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~-~~~~~~~~~G~~~~~~~P~R~~~s----------kwyvs~~~yp~  230 (366)
                      +..+.+.. ..+|++.+|+|..+..+.|...++. ..+....+.|......... ....          .++... ..  
T Consensus        70 ~n~g~~~a-~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~--  144 (224)
T cd06442          70 YIEGFKAA-RGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSRYVEGGGV-EGWGLKRKLISRGANLLARL-LL--  144 (224)
T ss_pred             HHHHHHHc-CCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEeeeecCCcc-CCCcHHHHHHHHHHHHHHHH-Hc--
Confidence            33444444 4699999999999998888887775 3344456666433211110 0000          000000 00  


Q ss_pred             CCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        231 NMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       231 ~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      ..-...+.|++.++++++++.+..  ........+|.-+ ..-+.+.|.+....+
T Consensus       145 ~~~~~~~~~~~~~~~r~~~~~ig~--~~~~~~~~~~~~l-~~~~~~~g~~i~~~p  196 (224)
T cd06442         145 GRKVSDPTSGFRAYRREVLEKLID--SLVSKGYKFQLEL-LVRARRLGYRIVEVP  196 (224)
T ss_pred             CCCCCCCCCccchhhHHHHHHHhh--hccCCCcEEeHHH-HHHHHHcCCeEEEeC
Confidence            011235677888999999999871  1111111223333 444556665554433

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=83.76  E-value=23  Score=35.31  Aligned_cols=192  Identities=12%  Similarity=0.069  Sum_probs=108.3

Q ss_pred             ceEEEEEEcCcCCH-HHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHH
Q psy16851         83 LKILILITSALDHS-EARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAM  161 (366)
Q Consensus        83 ~~Lli~V~Sap~~~-~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~  161 (366)
                      +.+-|+|.+-.+.. --.+.++..=.+.  ....+++.+...+.++.-+.+.+-.+.+++.+..... . .+...| ..+
T Consensus        54 p~vsviiP~ynE~~~~~~~~l~s~~~~d--yp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~-~-~~~~gK-~~a  128 (439)
T COG1215          54 PKVSVIIPAYNEEPEVLEETLESLLSQD--YPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYP-E-KKNGGK-AGA  128 (439)
T ss_pred             CceEEEEecCCCchhhHHHHHHHHHhCC--CCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEec-c-ccCccc-hHH
Confidence            45666666654443 2333333333221  2335677777766655555666666666544443311 0 122233 566


Q ss_pred             HHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcce-EeeeecCCCccc-ccCCCc----------eeeCCCCCC
Q psy16851        162 MEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMT-FFGRLAKKWRPI-RKSSSK----------YYVSPVQYS  229 (366)
Q Consensus       162 l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~-~~G~~~~~~~P~-R~~~sk----------wyvs~~~yp  229 (366)
                      +.++.... +.++++..|.|+.+..+.|.+.+......... +.|.......+. .+.-++          ++.-.... 
T Consensus       129 l~~~l~~~-~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-  206 (439)
T COG1215         129 LNNGLKRA-KGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAAS-  206 (439)
T ss_pred             HHHHHhhc-CCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhh-
Confidence            77887765 58999999999999999999988776433222 344321111000 000000          00000000 


Q ss_pred             CCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        230 PNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       230 ~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      ....+..+.|++.++.+++++.+.   ...+..--||..+ ++.++..|.+....+
T Consensus       207 ~~g~~~~~~G~~~~~rr~aL~~~g---~~~~~~i~ED~~l-t~~l~~~G~~~~~~~  258 (439)
T COG1215         207 KGGLISFLSGSSSAFRRSALEEVG---GWLEDTITEDADL-TLRLHLRGYRVVYVP  258 (439)
T ss_pred             hcCCeEEEcceeeeEEHHHHHHhC---CCCCCceeccHHH-HHHHHHCCCeEEEee
Confidence            012467889999999999999886   1223444699996 888887777655444

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=81.63  E-value=7.8  Score=36.52  Aligned_cols=122  Identities=12%  Similarity=-0.023  Sum_probs=62.3

Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCC--cceEeeeecCCC-cccccC---CCceeeCCC--CCCCC
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNS--KMTFFGRLAKKW-RPIRKS---SSKYYVSPV--QYSPN  231 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~--~~~~~G~~~~~~-~P~R~~---~skwyvs~~--~yp~~  231 (366)
                      .+++++.+.  +++|++..|||+.+..+.|...+......  ...++|...... ...+.+   ...+..+..  ..+..
T Consensus        64 ~Gi~~a~~~--~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (281)
T TIGR01556        64 QGLDASFRR--GVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISLDGLTT  141 (281)
T ss_pred             HHHHHHHHC--CCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeecccceeeecccccCC
Confidence            356666542  68999999999999977776666543221  233444322110 000000   000100000  00001


Q ss_pred             CC-CCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        232 MF-PDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       232 ~y-P~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .. ..++.++|.++++++++.+---... -++..||+-+ .+=+.+.|.+..-.+
T Consensus       142 ~~~~~~~~~sg~li~~~~~~~iG~fde~-~fi~~~D~e~-~~R~~~~G~~i~~~~  194 (281)
T TIGR01556       142 PQKTSFLISSGCLITREVYQRLGMMDEE-LFIDHVDTEW-SLRAQNYGIPLYIDP  194 (281)
T ss_pred             ceeccEEEcCcceeeHHHHHHhCCccHh-hcccchHHHH-HHHHHHCCCEEEEeC
Confidence            11 1355667789999999887321111 1345689876 554566776554444

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	5e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 73.6 bits (180), Expect = 5e-15
 Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 24/238 (10%)

Query: 85  ILILI-TSALDHSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDII 143
           I I + T+   H      +  TW     +          I +DS ++ + E    +  + 
Sbjct: 15  IFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTF-------IFTDSPDERLQERLGPHLVVT 67

Query: 144 QGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTF 203
           Q +   S+  L+ K  A  E+         +    DDD ++N   LL  L      +  +
Sbjct: 68  QCSAEHSHPALSCKMAA--EFDAFLVSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVY 125

Query: 204 FGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLK 263
            G+ +      R   +    S  +     F   T G  +     +   +   A  + ++ 
Sbjct: 126 VGKPS----LNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFVD 181

Query: 264 L-------EDVFTTGVVAQSLKIKRQHVNEFFNKRIPL---NACTIKKGISIHMIKYH 311
                   +D     ++   L  + Q    F +    L    A  + + +++    + 
Sbjct: 182 TSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYGVFE 239

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 42/240 (17%), Positives = 72/240 (30%), Gaps = 53/240 (22%)

Query: 132 VSEESNLYGDII---QGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDD-DMFINVP 187
             E    Y DI+   +  FVD++D          + + D       IL  ++ D  I   
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFD---------CKDVQDM---PKSILSKEEIDHIIMSK 58

Query: 188 -------KLLTFLVKHQNSKMTFF---------GRLAKKWRPIRKSSSKYYVSPVQYSPN 231
                  +L   L+  Q   +  F           L    +  ++  S      ++    
Sbjct: 59  DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118

Query: 232 MFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED---VFTTGV-----------VAQSL 277
           ++ D      Y    +V        L    L+L     V   GV           V  S 
Sbjct: 119 LYNDNQVFAKY----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174

Query: 278 KIKRQHVNEFFNKRIPLNACTIKKGISIHMIKYHEQFEL-WKKLLDGRSKYIDVIHYVQK 336
           K++ +   + F   + L  C   + +   + K   Q +  W    D  S     IH +Q 
Sbjct: 175 KVQCKMDFKIF--WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.95
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	94.63
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	94.5
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	93.29
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	93.06
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	92.47
3bcv_A	240	Putative glycosyltransferase protein; protein stru	91.51
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	87.19
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	86.56
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	82.97

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.95  E-value=1.4e-27  Score=227.92  Aligned_cols=207  Identities=17%  Similarity=0.183  Sum_probs=140.8

Q ss_pred             ceEEEEEEcCcC-CHHHHHHHHHHHhcccCCCCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccC--CCCchHHHHH
Q psy16851         83 LKILILITSALD-HSEARSAIRQTWGHYNLRNDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVD--SYDNLTLKTV  159 (366)
Q Consensus        83 ~~Lli~V~Sap~-~~~rR~aIR~TW~~~~~~~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~D--sY~Nlt~Ktl  159 (366)
                      -+|+|+|+|+++ +.+||.+||+||++.+..   .++|+.....+.+    ...  ..+++++.++.+  ++.+++.|+.
T Consensus        13 ~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~---~~fifsd~~d~~l----~~~--~~~~~~~~~~~~~~~~~~l~~K~~   83 (280)
T 2j0a_A           13 GDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---QTFIFTDSPDERL----QER--LGPHLVVTQCSAEHSHPALSCKMA   83 (280)
T ss_dssp             GGEEEEEECCGGGTTTTHHHHHHTGGGGSGG---GEEEEESSCCHHH----HHH--HGGGEEECCC-------CCCHHHH
T ss_pred             ccEEEEEECcHHHHHHHHHHHHHHHhccCCC---ceEEEcCCCcccc----ccc--ccccceeccccccccccchHHHHH
Confidence            479999999998 456889999999987532   2333333333322    222  246788888754  5678999999


Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcCCCcceEeeeecCCCcccccCCCceeeCCCCCCCCCCCCCCC-
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQNSKMTFFGRLAKKWRPIRKSSSKYYVSPVQYSPNMFPDFTT-  238 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~~~~~~~~G~~~~~~~P~R~~~skwyvs~~~yp~~~yP~Y~~-  238 (366)
                      ..+++...  ++++|++|+||||||+++||+++|...++.+++|+|.... ..|+|.   +++++.+.++...| +||+ 
T Consensus        84 ~~~~~~l~--~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~-~~~~~~---~~~~~~~~~~~~~~-~y~~G  156 (280)
T 2j0a_A           84 AEFDAFLV--SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSL-NRPIHA---SELQSKQRTKLVRF-WFATG  156 (280)
T ss_dssp             HHHHHHHH--HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-----------------------C-CEECG
T ss_pred             HHHHHHhC--CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEecc-Cccccc---cccCcccccccccc-CcccC
Confidence            98886542  5899999999999999999999999999999999999874 356653   45666554444455 4775 


Q ss_pred             CCcccccHHHHHHHHHhhhcC-------CCCCCCchhhHHHHHH-hCCCceeecCCcccCCC---CCCCCccCC--eEEE
Q psy16851        239 GPAYLFTSDVVSDVYTKALET-------TYLKLEDVFTTGVVAQ-SLKIKRQHVNEFFNKRI---PLNACTIKK--GISI  305 (366)
Q Consensus       239 G~gYvlS~d~~~~l~~~s~~~-------~~~~~EDV~ltGi~~~-~~gi~~~~~~~f~~~~~---~~~~c~~~~--~it~  305 (366)
                      |+|||||++++++|+......       .....||++| |+|++ ++||.+.+.++|+..+.   ...++.+..  .+++
T Consensus       157 GaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~l-G~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~~~~~s~  235 (280)
T 2j0a_A          157 GAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTV-GYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSY  235 (280)
T ss_dssp             GGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHH-HHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGGCSEEEC
T ss_pred             CCEEEECHHHHHHHHHhhcccccccccccCCCCccHHH-HHHHHhcCCCCceecccccCCCchhccCCHHHhccCcceec
Confidence            569999999999999765432       2234689998 99998 99999999999986542   256677655  3555


Q ss_pred             e
Q psy16851        306 H  306 (366)
Q Consensus       306 H  306 (366)
                      |
T Consensus       236 ~  236 (280)
T 2j0a_A          236 G  236 (280)
T ss_dssp             E
T ss_pred             c
Confidence            5

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=94.63  E-value=0.87  Score=44.90  Aligned_cols=164  Identities=9%  Similarity=-0.053  Sum_probs=87.5

Q ss_pred             eeEEEEecCCCc-hhhhhHHHHhhhcC-CeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851        115 VAIAFVVGIGSD-SGNQIVSEESNLYG-DIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF  192 (366)
Q Consensus       115 v~v~FvlG~~~~-~~~~~l~~E~~~y~-DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~  192 (366)
                      .+++.|-..+.+ ...+.+++-++.+. .|..+...++.. +    ..++..+.+.. ..+|++.+|+|+.+..+-|...
T Consensus        62 ~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-~----~~a~N~g~~~A-~gd~i~flD~D~~~~p~~L~~l  135 (472)
T 1xhb_A           62 EEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSG-L----IRARLKGAAVS-RGQVITFLDAHCECTAGWLEPL  135 (472)
T ss_dssp             EEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCC-H----HHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHH
T ss_pred             eEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCC-h----HHHHHHHHHhc-cCCeEEEECCCeEeCccHHHHH
Confidence            366766655553 35555555556666 465554443322 2    34455566665 6899999999999998776666


Q ss_pred             HHhcCC-CcceEeeeec---CCC-------ccccc-----CCCcee-eCCC-------CCCCCCCCCCCCCCcccccHHH
Q psy16851        193 LVKHQN-SKMTFFGRLA---KKW-------RPIRK-----SSSKYY-VSPV-------QYSPNMFPDFTTGPAYLFTSDV  248 (366)
Q Consensus       193 L~~~~~-~~~~~~G~~~---~~~-------~P~R~-----~~skwy-vs~~-------~yp~~~yP~Y~~G~gYvlS~d~  248 (366)
                      +..... ....+.|.+.   ...       .+.+.     ...+|. ++..       .......-+++.|+.+++++++
T Consensus       136 l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  215 (472)
T 1xhb_A          136 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  215 (472)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHH
Confidence            654321 1223333321   000       00000     000111 1100       0000112257889999999999


Q ss_pred             HHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        249 VSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       249 ~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      .+.+---.........||+-+ ++=+...|.+....+
T Consensus       216 ~~~iGgfde~~~~~g~ED~dl-~~R~~~~G~~i~~~p  251 (472)
T 1xhb_A          216 FQEIGTYDAGMDIWGGENLEI-SFRIWQCGGTLEIVT  251 (472)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHH-HHHHHHTTCEEEEEE
T ss_pred             HHHcCCCCCcccccCchhHHH-HHHHHhcCCeEEEcc
Confidence            988742111122234899997 877777886655443

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=94.50  E-value=0.85  Score=40.40  Aligned_cols=155  Identities=10%  Similarity=0.008  Sum_probs=84.8

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCC-----CchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSY-----DNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPK  188 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY-----~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~  188 (366)
                      .+.++.+-..+.+... ++.++......|........-     .|..  .-.++..+.+.+ +.+|++.+|+|.++..+.
T Consensus        30 ~~eiivvDd~S~d~t~-~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a-~g~~i~~lD~Dd~~~~~~  105 (255)
T 1qg8_A           30 DFELFIMDDNSNEETL-NVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMA-EGEYITYATDDNIYMPDR  105 (255)
T ss_dssp             CEEEEEEECSCCHHHH-HHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHC-CCSEEEEEETTEEECTTH
T ss_pred             ceEEEEEECCCCchHH-HHHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHc-CCCEEEEeCCCCccChHH
Confidence            5677777766653332 233444345556444332100     2332  234566777776 689999999999999877


Q ss_pred             HHHHHHhc--CCCcceEeeeecC-----CCcccccCCCceeeCCCCCCCCCCCCCCCCCcccccHHHHHHHHHhh-----
Q psy16851        189 LLTFLVKH--QNSKMTFFGRLAK-----KWRPIRKSSSKYYVSPVQYSPNMFPDFTTGPAYLFTSDVVSDVYTKA-----  256 (366)
Q Consensus       189 L~~~L~~~--~~~~~~~~G~~~~-----~~~P~R~~~skwyvs~~~yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s-----  256 (366)
                      |...+...  .+.-..+.|....     ...+.    ..+..+...... ....++.|++.++.+++++.+-...     
T Consensus       106 l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~  180 (255)
T 1qg8_A          106 LLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAAQVTW-NAPCAIDHCSVMHRYSVLEKVKEKFGSYWD  180 (255)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCCSCBS-CCTTTSCGGGEEEETHHHHHHHHHHSSSSC
T ss_pred             HHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchHHHHH-hhcCCCccceEEEEHHHHHhhccccccccc
Confidence            77666543  2333455554321     11111    111122211111 2335678899999999999975211     


Q ss_pred             hcCCCCCCCchhhHHHHHHhCC
Q psy16851        257 LETTYLKLEDVFTTGVVAQSLK  278 (366)
Q Consensus       257 ~~~~~~~~EDV~ltGi~~~~~g  278 (366)
                      ........||..+ .+-+...|
T Consensus       181 ~~~~~~~~eD~~~-~~r~~~~g  201 (255)
T 1qg8_A          181 ESPAFYRIGDARF-FWRVNHFY  201 (255)
T ss_dssp             CCGGGSTTHHHHH-HHHHTTTC
T ss_pred             CCcccchHHHHHH-HHHHHHhC
Confidence            0122456799886 55554444

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=93.29  E-value=1.7  Score=44.26  Aligned_cols=162  Identities=9%  Similarity=-0.029  Sum_probs=85.7

Q ss_pred             eEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHH
Q psy16851        116 AIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLV  194 (366)
Q Consensus       116 ~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~  194 (366)
                      .++.|-..+. .++.+.+++-++.+..|..+...... ++    ..+...+.+.. ..+|++.+|+|+.+..+-|...+.
T Consensus       146 EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~----~~A~N~G~~~A-~gd~i~fLD~D~~~~p~~L~~ll~  219 (570)
T 2d7i_A          146 EIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKRE-GL----IRTRMLGASVA-TGDVITFLDSHCEANVNWLPPLLD  219 (570)
T ss_dssp             EEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCC-CH----HHHHHHHHHHC-CSSEEEECCSSEEECTTCSHHHHH
T ss_pred             EEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCC-CH----HHHHHHHHHhc-CCCEEEEEcCCccccccHHHHHHH
Confidence            5676666555 44355566656667666555443322 22    23445555555 689999999999998766555554


Q ss_pred             hcCCCcceEee-eec---CCCcc--------cccCCCcee-----eCCC---CCCC---CCCCCCCCCCcccccHHHHHH
Q psy16851        195 KHQNSKMTFFG-RLA---KKWRP--------IRKSSSKYY-----VSPV---QYSP---NMFPDFTTGPAYLFTSDVVSD  251 (366)
Q Consensus       195 ~~~~~~~~~~G-~~~---~~~~P--------~R~~~skwy-----vs~~---~yp~---~~yP~Y~~G~gYvlS~d~~~~  251 (366)
                      .........+| .+.   .....        .+.. -.|.     ++..   .+..   ..--+++.|+++++++++.+.
T Consensus       220 ~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~  298 (570)
T 2d7i_A          220 RIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGA-FDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE  298 (570)
T ss_dssp             HHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEE-ECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred             HHHhCCCEEEeeeeeccCCCchhhccccCCccccc-ccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence            32211223333 211   00000        0000 0010     1100   1111   111256789999999999988


Q ss_pred             HHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        252 VYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       252 l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      +---.........||+-+ .+=+.+.|.+....+
T Consensus       299 iGgfDe~~~~~g~ED~dl-~~Rl~~~G~~i~~~p  331 (570)
T 2d7i_A          299 LGGYDPGLEIWGGEQYEI-SFKVWMCGGRMEDIP  331 (570)
T ss_dssp             TTSSCTTCCSSSSHHHHH-HHHHHHTTCEEEEEE
T ss_pred             cCCCCCcccccCcchHHH-HHHHHhCCCeEEEcc
Confidence            832111122223799997 777778887665443

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=93.06  E-value=1.5  Score=43.76  Aligned_cols=160  Identities=7%  Similarity=-0.079  Sum_probs=84.1

Q ss_pred             eeEEEEecCCC-chhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        115 VAIAFVVGIGS-DSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       115 v~v~FvlG~~~-~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      .++++|-..+. +++.    ...+.+..|..+....   |..  ...++..+.+.. ..+|++.+|+|..+..+-|...+
T Consensus        99 ~EIIvVDDgS~D~t~~----~~~~~~~~v~vi~~~~---n~G--~~~A~N~G~~~A-~gd~i~flD~D~~~~p~~L~~ll  168 (501)
T 2ffu_A           99 KEIILVDDYSNDPEDG----ALLGKIEKVRVLRNDR---REG--LMRSRVRGADAA-QAKVLTFLDSHCECNEHWLEPLL  168 (501)
T ss_dssp             EEEEEEECSCSCTHHH----HGGGGBTTEEEEECSS---CCH--HHHHHHHHHHHC-CSSEEEECCSSEEECTTCHHHHH
T ss_pred             eeEEEEECCCCchHHH----HHHhcCCCEEEEECCC---CcC--HHHHHHHHHHhc-CCCEEEEECCCcccCccHHHHHH
Confidence            46777766555 3332    2234456665544433   322  234556666665 68999999999999987766666


Q ss_pred             HhcCCC-cceEeeeec---CCCcc-------ccc-----CCCcee-eCCC-------CCCCCCCCCCCCCCcccccHHHH
Q psy16851        194 VKHQNS-KMTFFGRLA---KKWRP-------IRK-----SSSKYY-VSPV-------QYSPNMFPDFTTGPAYLFTSDVV  249 (366)
Q Consensus       194 ~~~~~~-~~~~~G~~~---~~~~P-------~R~-----~~skwy-vs~~-------~yp~~~yP~Y~~G~gYvlS~d~~  249 (366)
                      ...... ...+.+.+.   .....       .+.     ..-+|. ++..       .......-+++.|++.++++++.
T Consensus       169 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~  248 (501)
T 2ffu_A          169 ERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYF  248 (501)
T ss_dssp             HHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHH
T ss_pred             HHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHH
Confidence            543211 223333221   00000       000     000110 1100       00011122577899999999999


Q ss_pred             HHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        250 SDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       250 ~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      +.+---.........||+-+ .+-+...|.+....+
T Consensus       249 ~~iGgfde~~~~~g~ED~dl-~~Rl~~~G~~i~~~p  283 (501)
T 2ffu_A          249 EELGKYDMMMDVWGGENLEI-SFRVWQCGGSLEIIP  283 (501)
T ss_dssp             HHTTCCCTTCCSSSSHHHHH-HHHHHHTTCEEEEEE
T ss_pred             HHhCCCCccccccCcchHHH-HHHHHhcCCeEEEcc
Confidence            88842111122234899987 776777886655444

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=92.47  E-value=3.3  Score=43.24  Aligned_cols=122  Identities=15%  Similarity=0.151  Sum_probs=69.2

Q ss_pred             HHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhcC-CCcceEee-eecCCCcccc-cCCCcee---------eCCCC
Q psy16851        160 AMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKHQ-NSKMTFFG-RLAKKWRPIR-KSSSKYY---------VSPVQ  227 (366)
Q Consensus       160 ~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~~-~~~~~~~G-~~~~~~~P~R-~~~skwy---------vs~~~  227 (366)
                      .+++.+.... +++||+.+|||+.+..+.|...+.... ..+..++| .+.....+.+ ...+.|.         ++...
T Consensus       258 ~Gl~~A~g~~-~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  336 (657)
T 4fix_A          258 RVMYEALKNT-DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAE  336 (657)
T ss_dssp             HHHHHHHHHC-CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCC
T ss_pred             HHHHHHHhcC-CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccc
Confidence            4566665543 689999999999999887777665431 11233444 3321111100 0000010         00000


Q ss_pred             -------------------CCCCCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        228 -------------------YSPNMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       228 -------------------yp~~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                                         +.......|+.|++.++.+++++.+-  ...--++..||+-+ ++=+.+.|.+....+
T Consensus       337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vG--gfd~~F~~~ED~Dl-~lR~~~~G~ki~~~p  410 (657)
T 4fix_A          337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELG--QPLPLFIKWDDADY-GLRAAEHGYPTVTLP  410 (657)
T ss_dssp             SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHC--SCCSCSSSSHHHHH-HHHHHHTTCCEEEEE
T ss_pred             ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhC--CChhHhccCcHHHH-HHHHHHcCCeEEEEC
Confidence                               11112335888999999999999873  22222456799997 887888887654433

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=91.51  E-value=2.2  Score=37.10  Aligned_cols=76  Identities=14%  Similarity=0.144  Sum_probs=48.2

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      .++++.+-..+.+...+.+++-++.+..|.... .+   |..  .-.+...+.+.+ +.+|++.+|+|.++..+.|...+
T Consensus        34 ~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a-~g~~i~~lD~Dd~~~~~~l~~l~  106 (240)
T 3bcv_A           34 DIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVA-TGEYVAFCDSDDYVDSDMYMTMY  106 (240)
T ss_dssp             SEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHC-CSSEEEECCTTCCCCTTHHHHHH
T ss_pred             CeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHc-CCCEEEEECCCCcCCHHHHHHHH
Confidence            567777766555444444554455666665554 22   322  134556666666 68999999999999987776666


Q ss_pred             Hhc
Q psy16851        194 VKH  196 (366)
Q Consensus       194 ~~~  196 (366)
                      ...
T Consensus       107 ~~~  109 (240)
T 3bcv_A          107 NVA  109 (240)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=87.19  E-value=9.7  Score=40.50  Aligned_cols=121  Identities=15%  Similarity=0.020  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHHHhc--CCCcceEeeeecC-CCccc-ccCCCcee-eCCC--C-
Q psy16851        156 LKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFLVKH--QNSKMTFFGRLAK-KWRPI-RKSSSKYY-VSPV--Q-  227 (366)
Q Consensus       156 ~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L~~~--~~~~~~~~G~~~~-~~~P~-R~~~skwy-vs~~--~-  227 (366)
                      .|. ..++.+.+.+ +.+|++.+|+|+.+..+.|.+.+...  +++-....|.... +..|. ++. +.+. ++.+  . 
T Consensus       225 GKa-~alN~gl~~a-~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  301 (802)
T 4hg6_A          225 AKA-GNMSAALERL-KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNL-ALGDRCPPENEMF  301 (802)
T ss_dssp             HHH-HHHHHHHHHC-CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHH-TCCTTSCCTTHHH
T ss_pred             cch-HHHHHHHHhc-CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhh-hHHhhhhHHHHHH
Confidence            453 3567777776 68999999999999988877777654  3333344443221 11111 100 0000 0000  0 


Q ss_pred             CCC------CCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCchhhHHHHHHhCCCceee
Q psy16851        228 YSP------NMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQH  283 (366)
Q Consensus       228 yp~------~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~  283 (366)
                      |..      ..--+++.|++.++.+++.+.+-  ... ...-.||..+ +.-+.+.|.+...
T Consensus       302 ~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vG--gf~-~~~~~ED~~l-~~rl~~~G~ri~~  359 (802)
T 4hg6_A          302 YGKIHRGLDRWGGAFFCGSAAVLRRRALDEAG--GFA-GETITEDAET-ALEIHSRGWKSLY  359 (802)
T ss_dssp             HHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHT--TCC-CSSSSHHHHH-HHHHHTTTCCEEE
T ss_pred             HHHHHhhHhhcCCceecccchhhhHHHHHHcC--CcC-CCCcchHHHH-HHHHHHcCCeEEE
Confidence            000      00113567999999999999873  111 1223599997 8888887765443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=86.56  E-value=26  Score=35.41  Aligned_cols=157  Identities=12%  Similarity=0.061  Sum_probs=83.6

Q ss_pred             CCeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHH
Q psy16851        113 NDVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTF  192 (366)
Q Consensus       113 ~~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~  192 (366)
                      .++.++.+-..+.+...+.+.+-.+.+..|.... ..   |..  .-.++..+.+.+ +.+|++.+|+|.++..+.|...
T Consensus       403 ~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~---n~G--~~~a~n~g~~~a-~g~~i~~ld~D~~~~~~~l~~~  475 (625)
T 2z86_A          403 TDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QK---NKG--IGSASNTAVRLC-RGFYIGQLDSDDFLEPDAVELC  475 (625)
T ss_dssp             CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-EC---CCC--HHHHHHHHHHHC-CSSEEEECCTTCEECTTHHHHH
T ss_pred             CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CC---CCC--HHHHHHHHHHhc-CCCEEEEECCCcccChhHHHHH
Confidence            3567777766665433344444445566665543 22   221  124556666666 6899999999999998887776


Q ss_pred             HHhc--CCCcceEeeeecCCCcccccCCCceeeCCC---CCCC-CCCCCCCCCCcccccHHHHHHHHHhhhcCCCCCCCc
Q psy16851        193 LVKH--QNSKMTFFGRLAKKWRPIRKSSSKYYVSPV---QYSP-NMFPDFTTGPAYLFTSDVVSDVYTKALETTYLKLED  266 (366)
Q Consensus       193 L~~~--~~~~~~~~G~~~~~~~P~R~~~skwyvs~~---~yp~-~~yP~Y~~G~gYvlS~d~~~~l~~~s~~~~~~~~ED  266 (366)
                      +...  .+.-..+.|....     .+..+++.-...   .+.. ...-.++.|++.++.+++.+.+.  .....+...||
T Consensus       476 ~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g--gfd~~~~~~eD  548 (625)
T 2z86_A          476 LDEFRKDLSLACVYTTNRN-----IDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTE--GFNESISNAVD  548 (625)
T ss_dssp             HHHHHHCTTCSEEEEEEEE-----ECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHTTTT--CCCSSCSSCHH
T ss_pred             HHHHHhCCCeeEEEeeeEE-----ECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHHHhC--CCCCccCChHH
Confidence            6543  2333444443211     011111110000   1110 01123566788889988766542  12223446799


Q ss_pred             hhhHHHHHHhCCCceeecC
Q psy16851        267 VFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       267 V~ltGi~~~~~gi~~~~~~  285 (366)
                      .-+ .+-+.+.| .....+
T Consensus       549 ~dl-~~r~~~~g-~~~~~~  565 (625)
T 2z86_A          549 YDM-YLKLSEVG-PFKHIN  565 (625)
T ss_dssp             HHH-HHHHTTTS-CEEEEE
T ss_pred             HHH-HHHHHHhC-CEEEeC
Confidence            886 66666667 444443

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=82.97  E-value=19  Score=36.43  Aligned_cols=162  Identities=13%  Similarity=0.036  Sum_probs=81.9

Q ss_pred             CeeEEEEecCCCchhhhhHHHHhhhcCCeEEecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        114 DVAIAFVVGIGSDSGNQIVSEESNLYGDIIQGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       114 ~v~v~FvlG~~~~~~~~~l~~E~~~y~DIi~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      ...++.+-..+.+...+ +.++......+......+.-...    -.++..+.+.+ +.+|++.+|+|..+..+.|...+
T Consensus       123 ~~eiivvDd~s~d~t~~-~~~~~~~~~~i~~i~~~~~~~g~----~~a~N~g~~~a-~g~~v~~lD~D~~~~~~~l~~~~  196 (625)
T 2z86_A          123 DYEVIVADDGSKENIEE-IVREFESLLNIKYVRQKDYGYQL----CAVRNLGLRAA-KYNYVAILDCDMAPNPLWVQSYM  196 (625)
T ss_dssp             CEEEEEEEESCSSCHHH-HHHTTTTTSCEEEEEECCCSCCH----HHHHHHHHHHC-CSSEEEEECTTEEECTTHHHHHH
T ss_pred             CeEEEEEeCCCchhHHH-HHHHhhhcCCeEEEEeCCCCcch----hHHHHHHHHhC-CcCEEEEECCCCCCCHHHHHHHH
Confidence            56777776555533322 33333322344433322211111    23455566665 68999999999999987776666


Q ss_pred             HhcC-CCcceEeeeecC-CCcc------------ccc-----------------CCCceee----CCCCCCCCCCC-CCC
Q psy16851        194 VKHQ-NSKMTFFGRLAK-KWRP------------IRK-----------------SSSKYYV----SPVQYSPNMFP-DFT  237 (366)
Q Consensus       194 ~~~~-~~~~~~~G~~~~-~~~P------------~R~-----------------~~skwyv----s~~~yp~~~yP-~Y~  237 (366)
                      .... .....++|.... ....            .+.                 ....|..    ..........| .++
T Consensus       197 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (625)
T 2z86_A          197 ELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFF  276 (625)
T ss_dssp             HHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGC
T ss_pred             HHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEE
Confidence            5432 123344443211 0000            000                 0000100    00000011111 257


Q ss_pred             CCCcccccHHHHHHHHHhhhcCCCC--CCCchhhHHHHHHhCCCceeec
Q psy16851        238 TGPAYLFTSDVVSDVYTKALETTYL--KLEDVFTTGVVAQSLKIKRQHV  284 (366)
Q Consensus       238 ~G~gYvlS~d~~~~l~~~s~~~~~~--~~EDV~ltGi~~~~~gi~~~~~  284 (366)
                      .|++.++++++++.+-  .....++  ..||..+ ++=+...|.+....
T Consensus       277 ~g~~~~~rr~~l~~iG--gfde~~~~~g~ED~dl-~~Rl~~~G~~i~~~  322 (625)
T 2z86_A          277 SGGNVAFAKKWLFRAG--WFDEEFTHWGGEDNEF-GYRLYREGCYFRSV  322 (625)
T ss_dssp             CTTEEEEETHHHHHHC--CCCTTCSSCCCHHHHH-HHHHHHTTCEEEEC
T ss_pred             eeceeeeEHHHHHHhC--CCccccccCCcchhhh-hhhHHhCCceEEEc
Confidence            8999999999999883  1222222  3799997 87787888655443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	366
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	93.17

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.17  E-value=0.69  Score=40.77  Aligned_cols=163  Identities=9%  Similarity=-0.054  Sum_probs=84.0

Q ss_pred             eEEEEecCCC-chhhhhHHHHhhhcCCeE-EecccCCCCchHHHHHHHHHHHHhhCCCcceEEEeCCCceechHHHHHHH
Q psy16851        116 AIAFVVGIGS-DSGNQIVSEESNLYGDII-QGNFVDSYDNLTLKTVAMMEWIHDYCPDTHFILKTDDDMFINVPKLLTFL  193 (366)
Q Consensus       116 ~v~FvlG~~~-~~~~~~l~~E~~~y~DIi-~~df~DsY~Nlt~Ktl~~l~w~~~~c~~~~fvlK~DDD~fVn~~~L~~~L  193 (366)
                      .++.|-..+. ++..+.+.+-.+.+.+-+ .+....   |...  -.+...+.+.+ +.+|++.+|+|+.+..+-|...+
T Consensus        56 EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~~~---n~G~--~~a~N~Gi~~a-~gd~i~flD~D~~~~p~~l~~l~  129 (328)
T d1xhba2          56 EIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQ---RSGL--IRARLKGAAVS-RGQVITFLDAHCECTAGWLEPLL  129 (328)
T ss_dssp             EEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSS---CCCH--HHHHHHHHHHC-CSSEEEEEESSEEECTTCHHHHH
T ss_pred             EEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEecc---cccc--hHHHHHHHHhh-hcceeeecCcccccChhHHHHHH
Confidence            5666655454 444444444445555533 333222   2211  23556677766 68999999999999987766555


Q ss_pred             HhcCC-CcceEeeeec---CC-------CcccccC-----CCceee-CC-------CCCCCCCCCCCCCCCcccccHHHH
Q psy16851        194 VKHQN-SKMTFFGRLA---KK-------WRPIRKS-----SSKYYV-SP-------VQYSPNMFPDFTTGPAYLFTSDVV  249 (366)
Q Consensus       194 ~~~~~-~~~~~~G~~~---~~-------~~P~R~~-----~skwyv-s~-------~~yp~~~yP~Y~~G~gYvlS~d~~  249 (366)
                      ..... ......|.+.   ..       ....+..     ...|.. +.       ..+.....-+++.|+++++++++.
T Consensus       130 ~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f  209 (328)
T d1xhba2         130 ARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYF  209 (328)
T ss_dssp             HHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHH
T ss_pred             HHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHHH
Confidence            43211 1222222210   00       0000100     001111 10       011111112467899999999999


Q ss_pred             HHHHHhhhcCCCCCCCchhhHHHHHHhCCCceeecC
Q psy16851        250 SDVYTKALETTYLKLEDVFTTGVVAQSLKIKRQHVN  285 (366)
Q Consensus       250 ~~l~~~s~~~~~~~~EDV~ltGi~~~~~gi~~~~~~  285 (366)
                      ..+----........||+-+ ++=+.++|......+
T Consensus       210 ~~vGgfDe~~~~~g~ED~Dl-~~R~~~~G~~i~~~p  244 (328)
T d1xhba2         210 QEIGTYDAGMDIWGGENLEI-SFRIWQCGGTLEIVT  244 (328)
T ss_dssp             HHTTSCCTTSCTTCCCCSHH-HHHHHHTTCEEEEEE
T ss_pred             HHhCCCCCCCcCcCchHHHH-HHHHHHhCCeEEEeC
Confidence            98732111122334799998 777778887766554