Psyllid ID: psy16915

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEc
Coil and Loop (DISEMBL)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFtvfkddfspKFVALFTLLLFLKAFHWLTEDrvdfmerspmisYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Flexible Loop (DISEMBL)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Low Complexity Region (SEG)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPkfvalftlllflkafHWLTEDRVDFMERSPMISYIFHIRIIVlltvlglldlYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Disordered region (IsUnstruct)
*IYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL**
Disordered Region (DISOPRED)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Disordered Region (DISEMBL)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Disordered Region (DISPRO)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q9DBY1	612	E3 ubiquitin-protein liga	yes	N/A	0.988	0.282	0.687	3e-68
Q803I8	625	E3 ubiquitin-protein liga	yes	N/A	0.988	0.276	0.682	9e-68
Q86TM6	617	E3 ubiquitin-protein liga	yes	N/A	0.988	0.280	0.687	1e-67
Q5XHH7	595	E3 ubiquitin-protein liga	N/A	N/A	0.988	0.290	0.682	3e-65
Q6NRL6	605	E3 ubiquitin-protein liga	N/A	N/A	0.988	0.285	0.687	4e-65
Q95SP2	626	E3 ubiquitin-protein liga	yes	N/A	1.0	0.279	0.634	2e-62
A8Y4B2	622	E3 ubiquitin-protein liga	N/A	N/A	1.0	0.281	0.582	1e-54
Q20798	610	E3 ubiquitin-protein liga	yes	N/A	1.0	0.286	0.588	9e-54
Q9R049	643	E3 ubiquitin-protein liga	no	N/A	1.0	0.272	0.256	5e-11
Q9UKV5	643	E3 ubiquitin-protein liga	no	N/A	1.0	0.272	0.251	1e-10

>sp|Q9DBY1|SYVN1_MOUSE E3 ubiquitin-protein ligase synoviolin OS=Mus musculus GN=Syvn1 PE=1 SV=3

 Score =  257 bits (656), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 45  VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins such as SGK. Protects cells from ER stress-induced apoptosis. Sequesters p53/TP53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis. Required for embryogenesis.
Mus musculus (taxid: 10090)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q803I8|SYVN1_DANRE E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2 SV=2

 Score =  255 bits (652), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 118/173 (68%), Positives = 144/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GKL++K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 45  VLYIQAFVLVFLLGKLMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFV 104

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH R++ L+ +LG++D  FV  A  + +
Sbjct: 105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII 164

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ +   IKY LHTIDL  E  W++KAV+ LY EL
Sbjct: 165 TRGASVQLVFGFEYAILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTEL 217

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Sequesters p53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis.

Danio rerio (taxid: 7955)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q86TM6|SYVN1_HUMAN E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1 PE=1 SV=2

 Score =  255 bits (651), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 45  VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins such as SGK. Protects cells from ER stress-induced apoptosis. Protects neurons from apoptosis induced by polyglutamine-expanded huntingtin (HTT) or unfolded GPR37 by promoting their degradation. Sequesters p53/TP53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q5XHH7|SYVNB_XENLA E3 ubiquitin-protein ligase synoviolin B OS=Xenopus laevis GN=syvn1-b PE=2 SV=1

 Score =  247 bits (630), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 118/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           ++YIQA +LV L GK + K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 39  ILYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 98

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD +FV  AY + V
Sbjct: 99  ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDAFFVSHAYNSLV 158

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + + IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 159 TRGASVQLVFGFEYAILMTMILAVFIKYILHSVDLQSENPWDNKAVYMLYTEL 211

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Sequesters p53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis.

Xenopus laevis (taxid: 8355)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q6NRL6|SYVNA_XENLA E3 ubiquitin-protein ligase synoviolin A OS=Xenopus laevis GN=syvn1-a PE=2 SV=1

 Score =  246 bits (629), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 144/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK + K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 39  VLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 98

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD +FV  AY + V
Sbjct: 99  ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDAFFVSHAYHSLV 158

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
            +GASV +VFGFEYAIL+TV + + IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 159 IRGASVQLVFGFEYAILMTVILTVFIKYILHSVDLQSENPWDNKAVYMLYTEL 211

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Sequesters p53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis.

Xenopus laevis (taxid: 8355)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q95SP2|HRD1_DROME E3 ubiquitin-protein ligase HRD1 OS=Drosophila melanogaster GN=sip3 PE=1 SV=1

 Score =  238 bits (606), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 111/175 (63%), Positives = 142/175 (81%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           VIYIQ  ++V + GKL+ KIF G LRAAEFEHL+ER WYA+TETCLAFTVF+DDF+P+FV
Sbjct: 43  VIYIQFFVIVFMFGKLLSKIFLGTLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFV 102

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFT+LLFLK+FHWL E+RVDFMERSP++ ++FHIR+  LLTVLG+LD   ++ AY +T+
Sbjct: 103 ALFTVLLFLKSFHWLAEERVDFMERSPVLGWLFHIRVGSLLTVLGILDYVLLIHAYNSTL 162

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
            +G +V +VFGFEYAILLTV  +  IKY LH  ++  +  WE+KAVF LY ELV+
Sbjct: 163 VRGPTVQLVFGFEYAILLTVIASTAIKYVLHAAEMRTDTPWENKAVFLLYTELVI 217

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system also called ER-associated degradation (ERAD) involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Sequesters p53 in the cytoplasm and promotes its degradation, thereby negatively regulating its biological function in transcription, cell cycle regulation and apoptosis.

Drosophila melanogaster (taxid: 7227)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|A8Y4B2|HRD1_CAEBR E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae GN=sel-11 PE=3 SV=2

 Score =  212 bits (539), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 129/175 (73%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+Y Q ++LV L  +L+K I FG LRAAE EHL ER+W+AV ETCLAFTVF+DDFS  FV
Sbjct: 46  VLYFQGIVLVYLMFQLLKSILFGDLRAAEAEHLSERTWHAVLETCLAFTVFRDDFSAMFV 105

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
             F  LLF+K FHWL +DRVD MERSP+I+  FH+R++ +L  LG  D YFV  AY +T+
Sbjct: 106 MQFIGLLFIKCFHWLADDRVDMMERSPVITLRFHLRMMTVLAALGFADSYFVSSAYFSTI 165

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           TKGAS  IVFGFEYAILL + +++ IKY LH  DL     W++KAV+ LY EL++
Sbjct: 166 TKGASSQIVFGFEYAILLALVLHVTIKYLLHMHDLRNPQSWDNKAVYLLYAELLI 220

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated ubc-7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system, which is also called the ER-associated degradation (ERAD) system, involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Thought to play a role together with hsp-3 in developmental growth and function of intestinal cells and to play a role together with hsp-4 in gonad formation.

Caenorhabditis briggsae (taxid: 6238)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans GN=sel-11 PE=3 SV=1

 Score =  209 bits (531), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 103/175 (58%), Positives = 129/175 (73%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           VIY+Q ++LV L  +L+K I FG LRAAE EHL ER+W+AV ETCLAFTVF+DDFS  FV
Sbjct: 46  VIYVQGIVLVYLMFQLLKSILFGDLRAAEAEHLSERTWHAVLETCLAFTVFRDDFSAIFV 105

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
             F  LLF+K FHWL +DRVD MERSP+I+  FH+R++ +L  LG  D YFV  AY TT+
Sbjct: 106 MQFIGLLFIKCFHWLADDRVDMMERSPVITLRFHLRMMTVLAALGFADSYFVSSAYFTTI 165

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           T+GAS  IVFGFEYAILL + +++ IKY LH  DL     W++KAV+ LY EL +
Sbjct: 166 TRGASAQIVFGFEYAILLALVLHVTIKYLLHMHDLRNPQSWDNKAVYLLYAELFI 220

Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated ubc-7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system, which is also called the ER-associated degradation (ERAD) system, involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Thought to play a role together with hsp-3 in developmental growth and function of intestinal cells and to play a role together with hsp-4 in gonad formation.

Caenorhabditis elegans (taxid: 6239)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9R049|AMFR_MOUSE E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2

 Score = 67.4 bits (163), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 4/179 (2%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+   A  +++L  KL++ I FG LR +E +HL ++ W  +    +      +  + + V
Sbjct: 86  VLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEV 145

Query: 61  ALFTL----LLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAY 116
            ++ L    L+FL     L +DR +++  SP      H R++ LL  + L      V   
Sbjct: 146 VMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCC 205

Query: 117 QTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
            T  T G   +     E  ++     +++++Y +H  DLN E  WE K  +  Y + VM
Sbjct: 206 VTGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVM 264

E3 ubiquitin-protein ligase that mediates the polyubiquitination of a number of proteins such as CD3D, CYP3A4, CFTR and APOB for proteasomal degradation. Component of a VCP/p97-AMFR/gp78 complex that participates in the final step of endoplasmic reticulum-associated degradation (ERAD). The VCP/p97-AMFR/gp78 complex is involved in the sterol-accelerated ERAD degradation of HMGCR through binding to the HMGCR-INSIG complex at the ER membrane and initiating ubiquitination of HMGCR. The ubiquitinated HMGCR is then released from the ER by the complex into the cytosol for subsequent destruction. Also acts as a scaffold protein to assemble a complex that couples ubiquitination, retranslocation and deglycosylation. Mediates tumor invasion and metastasis.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9UKV5|AMFR_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo sapiens GN=AMFR PE=1 SV=2

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 4/179 (2%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+   A  +++L  KL++ I FG LR +E +HL ++ W  +    +      +  + + V
Sbjct: 86  VLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEV 145

Query: 61  ALFTL----LLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAY 116
            ++ L    L+FL     L +DR +++  SP      H R++ LL  + L          
Sbjct: 146 VMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCS 205

Query: 117 QTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
            T  T G   +     E  ++     +++++Y +H  DLN E  WE K  +  Y + VM
Sbjct: 206 ITGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVM 264

E3 ubiquitin-protein ligase that mediates the polyubiquitination of a number of proteins such as CD3D, CYP3A4, CFTR and APOB for proteasomal degradation. Component of a VCP/p97-AMFR/gp78 complex that participates in the final step of endoplasmic reticulum-associated degradation (ERAD). The VCP/p97-AMFR/gp78 complex is involved in the sterol-accelerated ERAD degradation of HMGCR through binding to the HMGCR-INSIG complex at the ER membrane and initiating ubiquitination of HMGCR. The ubiquitinated HMGCR is then released from the ER by the complex into the cytosol for subsequent destruction. Also acts as a scaffold protein to assemble a complex that couples ubiquitination, retranslocation and deglycosylation. Mediates tumor invasion and metastasis.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
241630759	580	E3 ubiquitin ligase, putative [Ixodes sc	1.0	0.301	0.737	2e-73
242017237	626	synoviolin, putative [Pediculus humanus	1.0	0.279	0.754	2e-72
427789049	629	Putative e3 ubiquitin-protein ligase syn	1.0	0.278	0.72	6e-71
91087035	566	PREDICTED: similar to synoviolin [Tribol	1.0	0.309	0.742	2e-70
390332982	535	PREDICTED: E3 ubiquitin-protein ligase s	1.0	0.327	0.702	2e-68
148701249	670	synovial apoptosis inhibitor 1, synoviol	0.988	0.258	0.687	2e-67
327290272	622	PREDICTED: e3 ubiquitin-protein ligase s	0.988	0.278	0.693	2e-67
344256142	661	E3 ubiquitin-protein ligase synoviolin [	0.988	0.261	0.687	4e-67
148701247	639	synovial apoptosis inhibitor 1, synoviol	0.988	0.270	0.687	1e-66
410913343	639	PREDICTED: LOW QUALITY PROTEIN: E3 ubiqu	0.988	0.270	0.693	1e-66

>gi|241630759|ref|XP_002410197.1| E3 ubiquitin ligase, putative [Ixodes scapularis] gi|215503341|gb|EEC12835.1| E3 ubiquitin ligase, putative [Ixodes scapularis]

 Score =  280 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 129/175 (73%), Positives = 153/175 (87%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           +IY+QA ++VIL GKL++K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSPKFV
Sbjct: 3   IIYLQAFVMVILTGKLMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPKFV 62

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVD+MERSP+ISYIFH+R++ LL +LG LD  FV  AY TT+
Sbjct: 63  ALFTLLLFLKCFHWLAEDRVDYMERSPIISYIFHLRVVALLLLLGFLDYAFVAHAYHTTL 122

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           TKGASV +VFGFEYAILL++ VNI IKY LHT+DL+ E  WE+KAV+ LY ELV+
Sbjct: 123 TKGASVQVVFGFEYAILLSIVVNIYIKYFLHTMDLHSENPWENKAVYLLYTELVV 177

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017237|ref|XP_002429098.1| synoviolin, putative [Pediculus humanus corporis] gi|212513962|gb|EEB16360.1| synoviolin, putative [Pediculus humanus corporis]

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 132/175 (75%), Positives = 152/175 (86%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           VIYIQALILV L GKL+ K+FFG+LRAAEFEHLMERSWYAVTETCLAFT+F+DDF+PKFV
Sbjct: 44  VIYIQALILVYLMGKLMSKVFFGELRAAEFEHLMERSWYAVTETCLAFTLFRDDFTPKFV 103

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFT+LLFLK+FHWL EDRVDFMERSP+IS++FH+R+  LL +LG LDL F+  AYQ+TV
Sbjct: 104 ALFTVLLFLKSFHWLAEDRVDFMERSPVISWLFHVRVSALLVILGSLDLSFISHAYQSTV 163

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           TKGASV +VFGFEYAIL T+ +NI IKY LHT DLN E  WESK VF LY E+VM
Sbjct: 164 TKGASVQLVFGFEYAILATIILNIAIKYILHTADLNSENPWESKTVFLLYTEVVM 218

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427789049|gb|JAA59976.1| Putative e3 ubiquitin-protein ligase synoviolin [Rhipicephalus pulchellus]

 Score =  271 bits (694), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 126/175 (72%), Positives = 151/175 (86%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           +IY+QA + VIL GKL++K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSPKFV
Sbjct: 44  IIYLQAFVFVILMGKLMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPKFV 103

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVD+MERSP+ISY+FH+R+I LL +LG LD  FV  AY TT+
Sbjct: 104 ALFTLLLFLKCFHWLAEDRVDYMERSPVISYLFHVRVIALLLLLGFLDYAFVAHAYHTTL 163

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           TKGASV +VFGFEYAILL++  NI +KY LHT+DL+ E  WE+KAV+ LY EL++
Sbjct: 164 TKGASVQVVFGFEYAILLSIVANIYVKYFLHTMDLHSENPWENKAVYLLYTELII 218

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91087035|ref|XP_974421.1| PREDICTED: similar to synoviolin [Tribolium castaneum] gi|270010520|gb|EFA06968.1| hypothetical protein TcasGA2_TC009927 [Tribolium castaneum]

 Score =  270 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 130/175 (74%), Positives = 157/175 (89%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           VIYIQA I V++ GK+++KIFFGQLR+AEFEHLMERSWYA+TETCLAFTVF+DDF+PKFV
Sbjct: 44  VIYIQAFICVLIVGKIMRKIFFGQLRSAEFEHLMERSWYAITETCLAFTVFRDDFNPKFV 103

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK+FHWL EDRVD+MERSP+IS +FHIR++ LL +LG LDL+F+  AYQ+TV
Sbjct: 104 ALFTLLLFLKSFHWLAEDRVDYMERSPVISLLFHIRVLSLLLLLGSLDLHFIQHAYQSTV 163

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           +KGASV +VFGFEYAILLTV +NI IKYALH++DLN E  W++KAVF LY EL+M
Sbjct: 164 SKGASVQLVFGFEYAILLTVVINIAIKYALHSVDLNSETPWDNKAVFLLYTELIM 218

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390332982|ref|XP_784731.3| PREDICTED: E3 ubiquitin-protein ligase synoviolin-like [Strongylocentrotus purpuratus]

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 123/175 (70%), Positives = 148/175 (84%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+Y+QA +LVIL GKL KK+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDF P+FV
Sbjct: 44  VLYLQAFVLVILMGKLFKKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFGPRFV 103

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           A+FTLLLF+K FHWL EDRVD+MERSP+IS++FH+R+I LL VL   DL F+  AY +T+
Sbjct: 104 AMFTLLLFVKCFHWLAEDRVDYMERSPVISWVFHMRVITLLVVLASFDLLFINYAYHSTL 163

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
           TKGASV +VFGFEYAILLTV +N+  KY LHTIDL  E  WE+KAV+ LY +L+M
Sbjct: 164 TKGASVQLVFGFEYAILLTVLINVFFKYVLHTIDLQSENPWENKAVYMLYTDLIM 218

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|148701249|gb|EDL33196.1| synovial apoptosis inhibitor 1, synoviolin, isoform CRA_c [Mus musculus]

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 103 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 162

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 163 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 222

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 223 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 275

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327290272|ref|XP_003229847.1| PREDICTED: e3 ubiquitin-protein ligase synoviolin-like [Anolis carolinensis]

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 120/173 (69%), Positives = 144/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK + K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 45  VLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMVLLGILDFLFVSHAYHSIL 164

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH+IDL  E  W++KAV+ LY EL
Sbjct: 165 TRGASVQLVFGFEYAILMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTEL 217

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344256142|gb|EGW12246.1| E3 ubiquitin-protein ligase synoviolin [Cricetulus griseus]

 Score =  259 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 134 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 193

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 194 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 253

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 254 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 306

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148701247|gb|EDL33194.1| synovial apoptosis inhibitor 1, synoviolin, isoform CRA_a [Mus musculus]

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 119/173 (68%), Positives = 145/173 (83%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 45  VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH RI+ L+ +LG+LD  FV  AY + +
Sbjct: 105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct: 165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410913343|ref|XP_003970148.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin-like [Takifugu rubripes]

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 120/173 (69%), Positives = 143/173 (82%)

Query: 1   VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFV 60
           V+YIQA +LV + GK ++K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP+FV
Sbjct: 46  VLYIQAFVLVFILGKFMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFV 105

Query: 61  ALFTLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV 120
           ALFTLLLFLK FHWL EDRVDFMERSP IS++FH R++ LL +LG+LD   V  A  + +
Sbjct: 106 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRVLSLLGMLGVLDFLXVNHACHSIL 165

Query: 121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
           T+GASV +VFGFEYAILLT+ +   IKY LHTIDLN E  WE+KAV+ LY EL
Sbjct: 166 TRGASVQLVFGFEYAILLTMVLTTFIKYLLHTIDLNSENPWENKAVYMLYTEL 218

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
UNIPROTKB|Q5XHH7	595	syvn1-b "E3 ubiquitin-protein	0.988	0.290	0.578	4e-51
UNIPROTKB|Q6NRL6	605	syvn1-a "E3 ubiquitin-protein	0.988	0.285	0.583	4e-51
UNIPROTKB|E1BAK9	611	SYVN1 "Uncharacterized protein	0.988	0.283	0.583	1.1e-50
UNIPROTKB|Q86TM6	617	SYVN1 "E3 ubiquitin-protein li	0.988	0.280	0.583	1.1e-50
UNIPROTKB|I3LGG8	610	SYVN1 "Uncharacterized protein	0.988	0.283	0.583	1.1e-50
MGI|MGI:1921376	612	Syvn1 "synovial apoptosis inhi	0.988	0.282	0.583	1.1e-50
ZFIN|ZDB-GENE-030131-7166	625	syvn1 "synovial apoptosis inhi	0.988	0.276	0.583	1.7e-50
UNIPROTKB|E2RSJ2	776	SYVN1 "Uncharacterized protein	0.988	0.222	0.583	1.9e-50
FB|FBgn0039875	626	sip3 "septin interacting prote	1.0	0.279	0.52	2.3e-46
UNIPROTKB|E9PMA1	236	SYVN1 "E3 ubiquitin-protein li	0.885	0.656	0.587	2.7e-45

UNIPROTKB|Q5XHH7 syvn1-b "E3 ubiquitin-protein ligase synoviolin B" [Xenopus laevis (taxid:8355)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 100/173 (57%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             ++YIQA +LV L GK + K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    39 ILYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 98

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+           +FV  AY + V
Sbjct:    99 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDAFFVSHAYNSLV 158

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + + IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   159 TRGASVQLVFGFEYAILMTMILAVFIKYILHSVDLQSENPWDNKAVYMLYTEL 211

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

UNIPROTKB|Q6NRL6 syvn1-a "E3 ubiquitin-protein ligase synoviolin A" [Xenopus laevis (taxid:8355)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 101/173 (58%), Positives = 122/173 (70%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK + K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    39 VLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 98

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+           +FV  AY + V
Sbjct:    99 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRILALMLLLGVLDAFFVSHAYHSLV 158

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
              +GASV +VFGFEYAIL+TV + + IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   159 IRGASVQLVFGFEYAILMTVILTVFIKYILHSVDLQSENPWDNKAVYMLYTEL 211

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

UNIPROTKB|E1BAK9 SYVN1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/173 (58%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    45 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+            FV  AY + +
Sbjct:   105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA

GO:0016881 "acid-amino acid ligase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q86TM6 SYVN1 "E3 ubiquitin-protein ligase synoviolin" [Homo sapiens (taxid:9606)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/173 (58%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    45 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+            FV  AY + +
Sbjct:   105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0030433 "ER-associated protein catabolic process" evidence=IMP;IDA

GO:0016881 "acid-amino acid ligase activity" evidence=IDA

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IMP

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006987 "activation of signaling protein activity involved in unfolded protein response" evidence=TAS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|I3LGG8 SYVN1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/173 (58%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    45 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+            FV  AY + +
Sbjct:   105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA

GO:0016881 "acid-amino acid ligase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1921376 Syvn1 "synovial apoptosis inhibitor 1, synoviolin" [Mus musculus (taxid:10090)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 101/173 (58%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    45 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 104

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+            FV  AY + +
Sbjct:   105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 164

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   165 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 217

GO:0000151 "ubiquitin ligase complex" evidence=ISO

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006986 "response to unfolded protein" evidence=ISO

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=ISO

GO:0016874 "ligase activity" evidence=IEA

GO:0016881 "acid-amino acid ligase activity" evidence=ISO

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=ISO

GO:0030433 "ER-associated protein catabolic process" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-7166 syvn1 "synovial apoptosis inhibitor 1, synoviolin" [Danio rerio (taxid:7955)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 101/173 (58%), Positives = 122/173 (70%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GKL++K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:    45 VLYIQAFVLVFLLGKLMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFV 104

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH R++            FV  A  + +
Sbjct:   105 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSII 164

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ +   IKY LHTIDL  E  W++KAV+ LY EL
Sbjct:   165 TRGASVQLVFGFEYAILMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTEL 217

GO:0008270 "zinc ion binding" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=ISS

GO:0016874 "ligase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

UNIPROTKB|E2RSJ2 SYVN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 527 (190.6 bits), Expect = 1.9e-50, P = 1.9e-50
 Identities = 101/173 (58%), Positives = 123/173 (71%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             V+YIQA +LV L GK++ K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP   
Sbjct:   210 VLYIQAFVLVFLLGKVMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFV 269

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL EDRVDFMERSP IS++FH RI+            FV  AY + +
Sbjct:   270 ALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSIL 329

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+GASV +VFGFEYAIL+T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   330 TRGASVQLVFGFEYAILMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 382

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0030433 "ER-associated protein catabolic process" evidence=IEA

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=IEA

GO:0016881 "acid-amino acid ligase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0039875 sip3 "septin interacting protein 3" [Drosophila melanogaster (taxid:7227)]

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 91/175 (52%), Positives = 118/175 (67%)

Query:     1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXX 60
             VIYIQ  ++V + GKL+ KIF G LRAAEFEHL+ER WYA+TETCLAFTVF+DDF+P   
Sbjct:    43 VIYIQFFVIVFMFGKLLSKIFLGTLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFV 102

Query:    61 XXXXXXXXXXXXHWLTEDRVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTV 120
                         HWL E+RVDFMERSP++ ++FHIR+              ++ AY +T+
Sbjct:   103 ALFTVLLFLKSFHWLAEERVDFMERSPVLGWLFHIRVGSLLTVLGILDYVLLIHAYNSTL 162

Query:   121 TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREIFWESKAVFFLYMELVM 175
              +G +V +VFGFEYAILLTV  +  IKY LH  ++  +  WE+KAVF LY ELV+
Sbjct:   163 VRGPTVQLVFGFEYAILLTVIASTAIKYVLHAAEMRTDTPWENKAVFLLYTELVI 217

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016881 "acid-amino acid ligase activity" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0030433 "ER-associated protein catabolic process" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0016021 "integral to membrane" evidence=ISM

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IGI

UNIPROTKB|E9PMA1 SYVN1 "E3 ubiquitin-protein ligase synoviolin" [Homo sapiens (taxid:9606)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 91/155 (58%), Positives = 109/155 (70%)

Query:    19 KIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPXXXXXXXXXXXXXXXHWLTED 78
             K+FFGQLRAAE EHL+ERSWYAVTETCLAFTVF+DDFSP               HWL ED
Sbjct:     3 KVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAED 62

Query:    79 RVDFMERSPMISYIFHIRIIVXXXXXXXXXXYFVVGAYQTTVTKGASVMIVFGFEYAILL 138
             RVDFMERSP IS++FH RI+            FV  AY + +T+GASV +VFGFEYAIL+
Sbjct:    63 RVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAILM 122

Query:   139 TVCVNILIKYALHTIDLNREIFWESKAVFFLYMEL 173
             T+ + I IKY LH++DL  E  W++KAV+ LY EL
Sbjct:   123 TMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTEL 157

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9DBY1	SYVN1_MOUSE	6, ., 3, ., 2, ., -	0.6878	0.9885	0.2826	yes	N/A
Q803I8	SYVN1_DANRE	6, ., 3, ., 2, ., -	0.6820	0.9885	0.2768	yes	N/A
Q95SP2	HRD1_DROME	6, ., 3, ., 2, ., -	0.6342	1.0	0.2795	yes	N/A
Q20798	HRD1_CAEEL	6, ., 3, ., 2, ., -	0.5885	1.0	0.2868	yes	N/A
Q86TM6	SYVN1_HUMAN	6, ., 3, ., 2, ., -	0.6878	0.9885	0.2803	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	175
COG5243	491	COG5243, HRD1, HRD ubiquitin ligase complex, ER me	3e-16

>gnl|CDD|227568 COG5243, HRD1, HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

 Score = 74.6 bits (183), Expect = 3e-16
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)

Query: 7   LILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLL 66
           L+L  L    +K + FG LR  E E L E+ W  +TE  LA +VF++  S  F  L + L
Sbjct: 51  LLLFFLIANALKTLLFGSLRTFELELLYEQLWITLTEILLAISVFREAISFSFFMLLSTL 110

Query: 67  LFLKAFHWLTEDRV--DFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGA 124
           LF K FHW+   R     ++ +    +IF  R      +L +LD   +     +      
Sbjct: 111 LFAKVFHWILSFRTERLQIQSTDQRFHIFS-RFSCAYFLLSILDASLIYLCISSEHLIDK 169

Query: 125 SVMIVFGFEYAILLTV 140
           S + +F  E+++LL  
Sbjct: 170 STLFLFVCEFSVLLLN 185

Length = 491

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
COG5243	491	HRD1 HRD ubiquitin ligase complex, ER membrane com	99.93
KOG0802|consensus	543		99.71
PF13705	508	TRC8_N: TRC8 N-terminal domain	97.32

>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=2.6e-25  Score=188.92  Aligned_cols=170  Identities=25%  Similarity=0.416  Sum_probs=142.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHhHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHhhhhhh
Q psy16915          2 IYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSWYAVTETCLAFTVFKDDFSPKFVALFTLLLFLKAFHWLTEDRVD   81 (175)
Q Consensus         2 ~~n~~~~~~~l~~k~l~~lfFG~LR~~E~e~l~er~~~~v~~~~l~~~if~~~~~~~~~~~f~~l~~lK~fhwl~~dR~e   81 (175)
                      .-|.++++..++|+++++++||+||..|.||++||+|++++|++++.++||++++..+..+++.|+++|+|||++++|.|
T Consensus        46 ~~~~ill~~~l~~~~l~~llFGsLr~~E~e~~~E~l~~tlt~~ll~iS~F~e~i~fs~~~l~~~Ll~~kvfhwil~~R~e  125 (491)
T COG5243          46 GLNVILLLFFLIANALKTLLFGSLRTFELELLYEQLWITLTEILLAISVFREAISFSFFMLLSTLLFAKVFHWILSFRTE  125 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q psy16915         82 FMERSPMISYIF--HIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLNREI  159 (175)
Q Consensus        82 ~l~~sp~~~~~~--h~R~~~ll~~l~~~D~~li~~~~~~~~~~g~~~~llf~fE~~il~~~~~~~~~ky~l~~~dl~~~~  159 (175)
                      ... ..+++..+  .+|+.+++.++.++|..++..|+.+...-..+...++..||-.+........-|-.+..+|.++++
T Consensus       126 r~~-~~st~~~~~ifSrfS~~~~lL~ild~~li~~CiSs~~liD~~~lfL~~c~F~~~ll~l~s~~n~~cV~n~~~~ddD  204 (491)
T COG5243         126 RLQ-IQSTDQRFHIFSRFSCAYFLLSILDASLIYLCISSEHLIDKSTLFLFVCEFSVLLLNLTSEANKLCVYNYEARDDD  204 (491)
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHHhhcccceeeccccccc
Confidence            542 23334444  459999999999999999999998754433344445555777766666666556777777777766


Q ss_pred             ccccceeeeeeeeec
Q psy16915        160 FWESKAVFFLYMELV  174 (175)
Q Consensus       160 ~We~K~~~~~y~el~  174 (175)
                        ++|++|.||.|+.
T Consensus       205 --d~rs~~~f~~~v~  217 (491)
T COG5243         205 --DERSTYLFRLEVC  217 (491)
T ss_pred             --ccceeeeeeeehH
Confidence              8899999999963

>KOG0802|consensus

Probab=99.71  E-value=1.8e-16  Score=143.75  Aligned_cols=173  Identities=27%  Similarity=0.410  Sum_probs=154.2

Q ss_pred             ChhHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHhHH-HHHHHHHHHH--HhcCCcchhHHHHHHHHHHHHHHHHHHhh
Q psy16915          1 VIYIQALILVILAGKLVKKIFFGQLRAAEFEHLMERSW-YAVTETCLAF--TVFKDDFSPKFVALFTLLLFLKAFHWLTE   77 (175)
Q Consensus         1 ~~~n~~~~~~~l~~k~l~~lfFG~LR~~E~e~l~er~~-~~v~~~~l~~--~if~~~~~~~~~~~f~~l~~lK~fhwl~~   77 (175)
                      +++|++++......+.++.++||.||..|.||+.|++| +.+.+..+..  +.++...+..|..|+.+++++|+|||+++
T Consensus        40 ~l~~~~l~~~~~~~~sl~~~~~g~l~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~  119 (543)
T KOG0802|consen   40 VLLNRALVVLALILLSLQLIFFGALLLSEAEHLSHSLWNLIGLKYTFLLGYVTFRTVLSELFSLWLLLLLFLHVFHLLAS  119 (543)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999 6677777666  77888777789999999999999999999


Q ss_pred             hhhhhhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy16915         78 DRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTV-TKGASVMIVFGFEYAILLTVCVNILIKYALHTIDLN  156 (175)
Q Consensus        78 dR~e~l~~sp~~~~~~h~R~~~ll~~l~~~D~~li~~~~~~~~-~~g~~~~llf~fE~~il~~~~~~~~~ky~l~~~dl~  156 (175)
                      ||+++++.+|..+...|.|+.+.+..+...|...+..++.... ..|.+..+.+.+|.+.+.........+|.++.-+-.
T Consensus       120 ~~~~~l~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~s~~~~~~t~~~~~l~~~~~~~~~~~~~~~~~~~~y~l~~~~~~  199 (543)
T KOG0802|consen  120 DRLPRLFFSPLITTLNHFRVVSVLFALLIVDGHLVYNSLKTAYRTYGLSMLIELTFPSLLVVFWTALVILQYVLHSTADH  199 (543)
T ss_pred             hHHHHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhheeccchHHHHHHHHHHHHHHHHHHhcchhh
Confidence            9999999999988899999999999999999998887777766 677888888999999999999999999999998734


Q ss_pred             Cccccccceeeeeeeee
Q psy16915        157 REIFWESKAVFFLYMEL  173 (175)
Q Consensus       157 ~~~~We~K~~~~~y~el  173 (175)
                      ...+||.|..+.++.+.
T Consensus       200 ~~~~~~~~~~l~~~~~~  216 (543)
T KOG0802|consen  200 IHIRSEDLSLLTFTLII  216 (543)
T ss_pred             cCcccCccceeechhHH
Confidence            44566999999988664

>PF13705 TRC8_N: TRC8 N-terminal domain

Probab=97.32  E-value=0.0064  Score=55.00  Aligned_cols=107  Identities=18%  Similarity=0.247  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhh-HHHHHHHHHHHHHHHH
Q psy16915         64 TLLLFLKAFHWLTEDRVDFMERSPMISYIFHIRIIVLLTVLGLLDLYFVVGAYQTTVTKGASV-MIVFGFEYAILLTVCV  142 (175)
Q Consensus        64 ~~l~~lK~fhwl~~dR~e~l~~sp~~~~~~h~R~~~ll~~l~~~D~~li~~~~~~~~~~g~~~-~llf~fE~~il~~~~~  142 (175)
                      .+-..++..|=+..-.+-.+..|++.++..|.|-.+.-..+.+.-..+...... ..  ..++ .+....-+....+.++
T Consensus       351 v~ta~Lh~~~ei~~pvLmsL~As~~~s~~rH~R~L~v~~~Ll~~P~~~~y~l~~-~~--~i~tWll~v~s~~~~t~vkv~  427 (508)
T PF13705_consen  351 VLTALLHSLHEIVDPVLMSLSASHNRSFWRHFRALSVCLFLLVFPLYLSYYLWS-FF--PIDTWLLIVTSFCVETIVKVL  427 (508)
T ss_pred             HHHHHHHHHHHHhHHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hC--ChHHHHHHHHHHHHHHHHHHH
Confidence            455677888888888888888899999999999988888888777655443322 22  2333 3333344555677799


Q ss_pred             HHHHHHHHHHhhcCCccccccceeeeeeeee
Q psy16915        143 NILIKYALHTIDLNREIFWESKAVFFLYMEL  173 (175)
Q Consensus       143 ~~~~ky~l~~~dl~~~~~We~K~~~~~y~el  173 (175)
                      .+...|++.++|.+++++||+=-.|+||++-
T Consensus       428 ~sl~iY~Lf~vd~~~~~~WE~LDD~VYyv~a  458 (508)
T PF13705_consen  428 GSLAIYILFMVDARREEPWEKLDDYVYYVRA  458 (508)
T ss_pred             HHHHHHHHHHHHhhcccchhhcccEEEEEec
Confidence            9999999999999999999999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00