Psyllid ID: psy16948


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------
MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLNHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRCSVDNAMYD
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccccccccHHHHHccccccccccEEEEEEEccccccccccccccccccEEEEEEccccccccccccEEEcccccccccccccccccccccccccccEEEEEEEEEEcccccHHHHHHHcccccccccEEEEcccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccEEEEEccccccccccccHHHHHHHHHHHccccccccHccEEEEEEEcccccccccccHHHHHHHHHHHccccccccccEEEEEEcccccccccccccccccccEEEEEccccccccccccEEEEEcccccccccccccccccccccccccEEEEEEEcccEcccccHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHccccccHcc
MQFKKRFLLVLLSCAFLAFCyfggyrlkhkqtkVLDEFSEDwidlnhekdiesspylrrlggdvlpnnqkcrmetCFDFTkcigdnfkvyiypsnpdeepntISSLYQKVLDVVKesryytddpsqACIFILAIdtldrdplssnyvhnvpskllklkhwnngknhivfnlfsgtwpdyleedlgfDTGQAILAKASMSvthfrtgfdvsiplfqkdlperggepgavisnnfpLRKKYILAFKGKryvygigsevrnslyhlhngaDMVLVTTCkhgknwaenkdgrcsvdnamyd
MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLnhekdiesspylrrLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGepgavisnnfplrKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHgknwaenkdgrcsvdnamyd
MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLNHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRCSVDNAMYD
****KRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLNHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPS*******TISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAE**************
**FKKRFLLVLLSCAFLAFCYFGGYR********************************************CRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTL*************PSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLP*************FPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENK************
MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLNHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRCSVDNAMYD
MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQ*******************************DV***NQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRCSV******
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLNHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRCSVDNAMYD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query297 2.2.26 [Sep-21-2011]
Q9V730 760 Exostosin-1 OS=Drosophila yes N/A 0.969 0.378 0.570 3e-98
A5D7I4 746 Exostosin-1 OS=Bos taurus yes N/A 0.986 0.392 0.490 1e-83
Q16394 746 Exostosin-1 OS=Homo sapie yes N/A 0.986 0.392 0.490 2e-83
A9X1C8 746 Exostosin-1 OS=Papio anub N/A N/A 0.986 0.392 0.490 3e-83
P97464 746 Exostosin-1 OS=Mus muscul yes N/A 0.986 0.392 0.487 3e-83
Q5RBC3 746 Exostosin-1 OS=Pongo abel yes N/A 0.986 0.392 0.490 7e-83
Q9JK82 746 Exostosin-1 OS=Cricetulus yes N/A 0.986 0.392 0.484 1e-82
Q5IGR7 741 Exostosin-1b OS=Danio rer yes N/A 0.983 0.394 0.478 2e-80
Q5IGR6 737 Exostosin-1c OS=Danio rer no N/A 0.983 0.396 0.460 1e-79
Q5IGR8 730 Exostosin-1a OS=Danio rer no N/A 0.976 0.397 0.479 3e-79
>sp|Q9V730|EXT1_DROME Exostosin-1 OS=Drosophila melanogaster GN=ttv PE=1 SV=1 Back     alignment and function desciption
 Score =  358 bits (919), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/326 (57%), Positives = 219/326 (67%), Gaps = 38/326 (11%)

Query: 1   MQFKKRFLLVLLSCAFLAFCYFGGYRLK----------HKQTK--------VLDEF--SE 40
           MQ KKR++LV +SCAFLA+ YFGGYRLK          H+  K         L  F  + 
Sbjct: 1   MQAKKRYILVFVSCAFLAYAYFGGYRLKVSPLRPRRAQHESAKDGGVQPHEQLPSFLGAH 60

Query: 41  DWIDL-----NHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSN 95
           D  +L     N  K ++SS +L       +     CRMETCFDFT+C  D F VYIYP  
Sbjct: 61  DMQELQLLQSNQSKSLDSSKHL-------VTRKPDCRMETCFDFTRCY-DRFLVYIYPPE 112

Query: 96  P----DEEPNTISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVP 151
           P       P T S+ YQK+L  ++ESRYYT DP+ AC+F+L IDTLDRD LS +YV NVP
Sbjct: 113 PLNSLGAAPPT-SANYQKILTAIQESRYYTSDPTAACLFVLGIDTLDRDSLSEDYVRNVP 171

Query: 152 SKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSI 211
           S+L +L +WNNG+NHI+FNL+SGTWPDY E  LGFD G+AILAKASM V   R GFDVSI
Sbjct: 172 SRLARLPYWNNGRNHIIFNLYSGTWPDYAENSLGFDAGEAILAKASMGVLQLRHGFDVSI 231

Query: 212 PLFQKDLPERGGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVL 271
           PLF K  P R G  G V SNNFP  KKY+LAFKGKRYV+GIGSE RNSL+HLHNG DMVL
Sbjct: 232 PLFHKQFPLRAGATGTVQSNNFPANKKYLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVL 291

Query: 272 VTTCKHGKNWAENKDGRCSVDNAMYD 297
           VTTC+HGK+W E +D RC  DN  YD
Sbjct: 292 VTTCRHGKSWRELQDNRCDEDNREYD 317




Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains. Botv is the trigger of heparan sulfate chain initiation and polymerization takes place by a complex of ttv and sotv. Plays a central role in diffusion of morphogens hedgehog (hh), wingless (wg) and decapentaplegic (dpp) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis which are required for movement of hh, dpp and wg morphogens.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 5
>sp|A5D7I4|EXT1_BOVIN Exostosin-1 OS=Bos taurus GN=EXT1 PE=2 SV=1 Back     alignment and function description
>sp|Q16394|EXT1_HUMAN Exostosin-1 OS=Homo sapiens GN=EXT1 PE=1 SV=2 Back     alignment and function description
>sp|A9X1C8|EXT1_PAPAN Exostosin-1 OS=Papio anubis GN=EXT1 PE=3 SV=1 Back     alignment and function description
>sp|P97464|EXT1_MOUSE Exostosin-1 OS=Mus musculus GN=Ext1 PE=1 SV=1 Back     alignment and function description
>sp|Q5RBC3|EXT1_PONAB Exostosin-1 OS=Pongo abelii GN=EXT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9JK82|EXT1_CRIGR Exostosin-1 OS=Cricetulus griseus GN=EXT1 PE=1 SV=1 Back     alignment and function description
>sp|Q5IGR7|EXT1B_DANRE Exostosin-1b OS=Danio rerio GN=ext1b PE=2 SV=1 Back     alignment and function description
>sp|Q5IGR6|EXT1C_DANRE Exostosin-1c OS=Danio rerio GN=ext1c PE=2 SV=1 Back     alignment and function description
>sp|Q5IGR8|EXT1A_DANRE Exostosin-1a OS=Danio rerio GN=ext1a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
242018853 725 Exostosin-1, putative [Pediculus humanus 0.979 0.401 0.614 1e-103
66517433 711 PREDICTED: exostosin-1 [Apis mellifera] 0.962 0.402 0.586 1e-100
307197832 711 Exostosin-1 [Harpegnathos saltator] 0.959 0.400 0.584 2e-99
332017043 911 Exostosin-1 [Acromyrmex echinatior] 0.962 0.313 0.583 3e-99
307177266 711 Exostosin-1 [Camponotus floridanus] 0.962 0.402 0.586 4e-99
383847108 711 PREDICTED: exostosin-1-like [Megachile r 0.959 0.400 0.575 5e-99
340719750 711 PREDICTED: exostosin-1-like isoform 1 [B 0.966 0.403 0.575 8e-99
194883052 760 GG20465 [Drosophila erecta] gi|190658805 0.969 0.378 0.582 1e-98
118781611 744 AGAP010388-PA [Anopheles gambiae str. PE 1.0 0.399 0.566 1e-98
380027202 711 PREDICTED: exostosin-1-like [Apis florea 0.962 0.402 0.583 1e-98
>gi|242018853|ref|XP_002429885.1| Exostosin-1, putative [Pediculus humanus corporis] gi|212514919|gb|EEB17147.1| Exostosin-1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/311 (61%), Positives = 234/311 (75%), Gaps = 20/311 (6%)

Query: 1   MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLN---HEKDIESSPYL 57
           MQ KKR+LLVLLSCAFLA+CYFGGYRLK K   +  E  + + D+N   ++KD+  + Y 
Sbjct: 1   MQAKKRYLLVLLSCAFLAYCYFGGYRLKSKSENL--ESLKSFTDINDQVYDKDLSGNVYQ 58

Query: 58  RRLGGDVLPNN-------QKCRMETCFDFTKCIGDNFKVYIYPSNPDEE----PNTISSL 106
           RR    + PN+       +KCRMETCFD++KC  + FK+Y+YP   DE     P   S+ 
Sbjct: 59  RR---KLWPNDIDGKTIKEKCRMETCFDYSKCEKNGFKIYVYPQT-DESGIPLPLVPSAS 114

Query: 107 YQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNH 166
           YQK+++V+ ESRYYT DPSQAC+F+LAIDTLDRD LS++YV N+P ++ KL +WN G+NH
Sbjct: 115 YQKIINVIIESRYYTSDPSQACLFVLAIDTLDRDSLSNDYVRNLPLRIQKLPYWNKGRNH 174

Query: 167 IVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPG 226
           ++FNL+SGTWPDY EE+LGFD G +ILAKASMS  HFR  FDVSIPLF K+  E+GGE G
Sbjct: 175 VIFNLYSGTWPDYAEENLGFDYGFSILAKASMSTVHFRPNFDVSIPLFHKNHREKGGESG 234

Query: 227 AVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKD 286
            V SNNFP+ KKY+LAFKGKRYV+GIGSE RNSLYHLHN  DMVLVTTCKHGK+W E KD
Sbjct: 235 YVSSNNFPVIKKYVLAFKGKRYVHGIGSETRNSLYHLHNEKDMVLVTTCKHGKSWKEMKD 294

Query: 287 GRCSVDNAMYD 297
            RC  DN  YD
Sbjct: 295 ERCDEDNQEYD 305




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66517433|ref|XP_391845.2| PREDICTED: exostosin-1 [Apis mellifera] Back     alignment and taxonomy information
>gi|307197832|gb|EFN78943.1| Exostosin-1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332017043|gb|EGI57842.1| Exostosin-1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307177266|gb|EFN66444.1| Exostosin-1 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383847108|ref|XP_003699197.1| PREDICTED: exostosin-1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340719750|ref|XP_003398310.1| PREDICTED: exostosin-1-like isoform 1 [Bombus terrestris] gi|340719752|ref|XP_003398311.1| PREDICTED: exostosin-1-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|194883052|ref|XP_001975618.1| GG20465 [Drosophila erecta] gi|190658805|gb|EDV56018.1| GG20465 [Drosophila erecta] Back     alignment and taxonomy information
>gi|118781611|ref|XP_311558.3| AGAP010388-PA [Anopheles gambiae str. PEST] gi|116130033|gb|EAA07205.3| AGAP010388-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|380027202|ref|XP_003697318.1| PREDICTED: exostosin-1-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query297
FB|FBgn0020245 760 ttv "tout-velu" [Drosophila me 0.818 0.319 0.621 4.3e-94
UNIPROTKB|F1PTN7 746 EXT1 "Uncharacterized protein" 0.848 0.337 0.556 1.3e-82
UNIPROTKB|A5D7I4 746 EXT1 "Exostosin-1" [Bos taurus 0.848 0.337 0.556 2.8e-82
UNIPROTKB|Q16394 746 EXT1 "Exostosin-1" [Homo sapie 0.848 0.337 0.556 3.6e-82
MGI|MGI:894663 746 Ext1 "exostoses (multiple) 1" 0.848 0.337 0.552 7.4e-82
UNIPROTKB|G3V901 746 Ext1 "Similar to Ext1" [Rattus 0.848 0.337 0.552 7.4e-82
UNIPROTKB|Q9JK82 746 EXT1 "Exostosin-1" [Cricetulus 0.848 0.337 0.548 4e-81
ZFIN|ZDB-GENE-050211-4 741 ext1b "exostoses (multiple) 1b 0.868 0.348 0.530 7.4e-80
UNIPROTKB|F1NYD7 696 LOC100858205 "Uncharacterized 0.808 0.344 0.581 7.1e-77
ZFIN|ZDB-GENE-050211-3 730 ext1a "exostoses (multiple) 1a 0.973 0.395 0.496 5e-76
FB|FBgn0020245 ttv "tout-velu" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 839 (300.4 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
 Identities = 159/256 (62%), Positives = 185/256 (72%)

Query:    46 NHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNP----DEEPN 101
             N  K ++SS +L       +     CRMETCFDFT+C  D F VYIYP  P       P 
Sbjct:    71 NQSKSLDSSKHL-------VTRKPDCRMETCFDFTRCY-DRFLVYIYPPEPLNSLGAAPP 122

Query:   102 TISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWN 161
             T S+ YQK+L  ++ESRYYT DP+ AC+F+L IDTLDRD LS +YV NVPS+L +L +WN
Sbjct:   123 T-SANYQKILTAIQESRYYTSDPTAACLFVLGIDTLDRDSLSEDYVRNVPSRLARLPYWN 181

Query:   162 NGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPER 221
             NG+NHI+FNL+SGTWPDY E  LGFD G+AILAKASM V   R GFDVSIPLF K  P R
Sbjct:   182 NGRNHIIFNLYSGTWPDYAENSLGFDAGEAILAKASMGVLQLRHGFDVSIPLFHKQFPLR 241

Query:   222 GGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNW 281
              G  G V SNNFP  KKY+LAFKGKRYV+GIGSE RNSL+HLHNG DMVLVTTC+HGK+W
Sbjct:   242 AGATGTVQSNNFPANKKYLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVLVTTCRHGKSW 301

Query:   282 AENKDGRCSVDNAMYD 297
              E +D RC  DN  YD
Sbjct:   302 RELQDNRCDEDNREYD 317


GO:0016021 "integral to membrane" evidence=NAS
GO:0008589 "regulation of smoothened signaling pathway" evidence=IMP
GO:0008375 "acetylglucosaminyltransferase activity" evidence=ISS;NAS
GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IDA;NAS;IMP;TAS
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP
GO:0015014 "heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process" evidence=IMP;NAS
GO:0007224 "smoothened signaling pathway" evidence=IMP;NAS
GO:0015020 "glucuronosyltransferase activity" evidence=NAS
GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA
GO:0008101 "decapentaplegic signaling pathway" evidence=IMP
GO:0016055 "Wnt receptor signaling pathway" evidence=IGI;IMP
GO:0005515 "protein binding" evidence=IPI
GO:0030210 "heparin biosynthetic process" evidence=IMP
GO:0050509 "N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity" evidence=ISS
GO:0006044 "N-acetylglucosamine metabolic process" evidence=ISS
GO:0050508 "glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity" evidence=ISS
GO:0008354 "germ cell migration" evidence=IMP
GO:0048312 "intracellular distribution of mitochondria" evidence=IMP
GO:0050808 "synapse organization" evidence=IMP
GO:0048488 "synaptic vesicle endocytosis" evidence=IMP
UNIPROTKB|F1PTN7 EXT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7I4 EXT1 "Exostosin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q16394 EXT1 "Exostosin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:894663 Ext1 "exostoses (multiple) 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V901 Ext1 "Similar to Ext1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9JK82 EXT1 "Exostosin-1" [Cricetulus griseus (taxid:10029)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050211-4 ext1b "exostoses (multiple) 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYD7 LOC100858205 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050211-3 ext1a "exostoses (multiple) 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9V730EXT1_DROME2, ., 4, ., 1, ., 2, 2, 50.57050.96960.3789yesN/A
O01704EXT1_CAEELNo assigned EC number0.48270.76760.6031yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
pfam03016292 pfam03016, Exostosin, Exostosin family 2e-28
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information
 Score =  110 bits (277), Expect = 2e-28
 Identities = 50/227 (22%), Positives = 79/227 (34%), Gaps = 33/227 (14%)

Query: 83  IGDNFKVYIYP------------SNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIF 130
                KVY+Y                        +    +   +  SR  T DP +A +F
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNSRCRTLDPDEADLF 60

Query: 131 ILAIDTLDRD----PLSSNYVHNVPSKLLKLKHWN--NGKNHIVFNL--FSGTWPDYLEE 182
            +   T                 +   L  L +WN   G++HI+ N   F G+  D L  
Sbjct: 61  FVPFYTSLSVGTNAVERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPFGGSAFDRL-P 119

Query: 183 DLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILA 242
            L  +T  A+LA    S   FR GFDV +P +         E   +  +    ++K +L 
Sbjct: 120 ALNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPNSVDDLESDGMPPS----KRKTLLF 175

Query: 243 FKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRC 289
           F G     G G+        L N    +L+  CK+  ++    +  C
Sbjct: 176 FAGGPRPAGKGA--------LANAIRDLLIEECKNSPDFQCEGNQSC 214


The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 297
KOG2264|consensus 907 99.97
KOG1022|consensus 691 99.96
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 99.91
KOG1021|consensus 464 99.57
KOG1021|consensus 464 95.44
>KOG2264|consensus Back     alignment and domain information
Probab=99.97  E-value=8.8e-31  Score=258.75  Aligned_cols=173  Identities=25%  Similarity=0.528  Sum_probs=138.6

Q ss_pred             CCCCCCCcccccccccCcC-CCCCcEEEeCCCCCCCCCCccHHH--HHHHHHhhcCCccCCCCCCceEEEeeccCCCCCC
Q psy16948         65 LPNNQKCRMETCFDFTKCI-GDNFKVYIYPSNPDEEPNTISSLY--QKVLDVVKESRYYTDDPSQACIFILAIDTLDRDP  141 (297)
Q Consensus        65 ~~~~~~C~m~tCFD~sRC~-~~~fkVYVYp~~~~~~~~p~s~~y--~~il~~i~~S~y~T~dP~eACLFv~~id~l~~d~  141 (297)
                      +.+.+.|+|++|||||||+ +++|+||||..+....|... .+|  +.|.+.|..+-|.|+||+.|||+++.++++..-.
T Consensus       173 p~~~~~c~lhncfdySRCsltSgfPVYvyd~D~~~~G~~~-d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvge~q~P~  251 (907)
T KOG2264|consen  173 PSQISPCQLHNCFDYSRCSLTSGFPVYVYDSDIITSGQSE-DEWLKQVFQETIPNNVYLVETPDKACIYIHLVGEIQSPV  251 (907)
T ss_pred             ccccCcccchhccccccccccCCceeEEeccceeecccch-HHHHHHHHHHhcccceeEeeCCCccEEEEEEeccccCCC
Confidence            3566889999999999999 89999999998875544332 334  3456668889999999999999999999875432


Q ss_pred             CCcccccchhhhhhcCCCCC-CCCCeEEEEccCCCCCCccccccCCCCCcEEEEeecCCccccccCCceeccCCCCCCCC
Q psy16948        142 LSSNYVHNVPSKLLKLKHWN-NGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPE  220 (297)
Q Consensus       142 l~~~yv~~~~~~l~~lPyWN-~GrNHlifnl~~~~~P~~~~~~l~~~~g~AIla~As~s~~~fRpgFDVSlPl~~~~~p~  220 (297)
                      ...  --. .++|-+||||. +|+||+|||+.+.  .+.++....+++|+||++|++|...+||||||..+|.+.  |+ 
T Consensus       252 ~l~--p~e-leklyslp~w~~dg~Nhvl~Nl~r~--s~~~n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv~--h~-  323 (907)
T KOG2264|consen  252 VLT--PAE-LEKLYSLPHWRTDGFNHVLFNLGRP--SDTQNLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPVN--HI-  323 (907)
T ss_pred             cCC--hHh-hhhhhcCccccCCCcceEEEEccCc--cccccceeEeccCceEEEeecceeeeeccCCCcccCccc--cc-
Confidence            111  011 25588999999 9999999999733  345555567899999999999999999999999997554  34 


Q ss_pred             CCCCCCccccCCCCCCcceEEEeecc
Q psy16948        221 RGGEPGAVISNNFPLRKKYILAFKGK  246 (297)
Q Consensus       221 ~gg~~~~~~~~~~P~~RkyLl~f~Gk  246 (297)
                      .++..+...+.+.|.+||||++|+||
T Consensus       324 ~~e~~~~e~~p~vP~~RkyL~t~qgk  349 (907)
T KOG2264|consen  324 AVEKNFVELTPLVPFQRKYLITLQGK  349 (907)
T ss_pred             ccCccceecCcccchhhheeEEEEee
Confidence            56777888999999999999999996



>KOG1022|consensus Back     alignment and domain information
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG1021|consensus Back     alignment and domain information
>KOG1021|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query297
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 106/312 (33%)

Query: 25  YRLKHKQTKVLDEFSEDWIDLNHEKD-----IESSPYLRRLGGDVLPNNQKCRMETCFDF 79
           Y++    T   D  S   + ++  +      ++S PY   L   VL N Q  +    F+ 
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLLNVQNAKAWNAFNL 264

Query: 80  TKC-------------IGDNFKVYIYPSNPDEEPNTIS---SLYQKVLDVVKESRYYTDD 123
             C                         +      T     SL  K LD   +     D 
Sbjct: 265 -SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-----DL 318

Query: 124 PSQAC------IFILA----------------------------IDTLDRDPLSSNYVH- 148
           P +        + I+A                            ++ L+       +   
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378

Query: 149 -------NVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVT 201
                  ++P+ LL L                  W D ++ D+     +  L K S+   
Sbjct: 379 SVFPPSAHIPTILLSL-----------------IWFDVIKSDVMVVVNK--LHKYSLVEK 419

Query: 202 HFRTGFDVSIPLFQKDLPERGGEPGAV---ISNNFPLRKKY----ILAFKGKRYVYG-IG 253
             +    +SIP    +L  +     A+   I +++ + K +    ++     +Y Y  IG
Sbjct: 420 QPKE-STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478

Query: 254 SEVRNSLYHLHN 265
                  +HL N
Sbjct: 479 -------HHLKN 483


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00