Psyllid ID: psy16948
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 297 | ||||||
| 242018853 | 725 | Exostosin-1, putative [Pediculus humanus | 0.979 | 0.401 | 0.614 | 1e-103 | |
| 66517433 | 711 | PREDICTED: exostosin-1 [Apis mellifera] | 0.962 | 0.402 | 0.586 | 1e-100 | |
| 307197832 | 711 | Exostosin-1 [Harpegnathos saltator] | 0.959 | 0.400 | 0.584 | 2e-99 | |
| 332017043 | 911 | Exostosin-1 [Acromyrmex echinatior] | 0.962 | 0.313 | 0.583 | 3e-99 | |
| 307177266 | 711 | Exostosin-1 [Camponotus floridanus] | 0.962 | 0.402 | 0.586 | 4e-99 | |
| 383847108 | 711 | PREDICTED: exostosin-1-like [Megachile r | 0.959 | 0.400 | 0.575 | 5e-99 | |
| 340719750 | 711 | PREDICTED: exostosin-1-like isoform 1 [B | 0.966 | 0.403 | 0.575 | 8e-99 | |
| 194883052 | 760 | GG20465 [Drosophila erecta] gi|190658805 | 0.969 | 0.378 | 0.582 | 1e-98 | |
| 118781611 | 744 | AGAP010388-PA [Anopheles gambiae str. PE | 1.0 | 0.399 | 0.566 | 1e-98 | |
| 380027202 | 711 | PREDICTED: exostosin-1-like [Apis florea | 0.962 | 0.402 | 0.583 | 1e-98 |
| >gi|242018853|ref|XP_002429885.1| Exostosin-1, putative [Pediculus humanus corporis] gi|212514919|gb|EEB17147.1| Exostosin-1, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 234/311 (75%), Gaps = 20/311 (6%)
Query: 1 MQFKKRFLLVLLSCAFLAFCYFGGYRLKHKQTKVLDEFSEDWIDLN---HEKDIESSPYL 57
MQ KKR+LLVLLSCAFLA+CYFGGYRLK K + E + + D+N ++KD+ + Y
Sbjct: 1 MQAKKRYLLVLLSCAFLAYCYFGGYRLKSKSENL--ESLKSFTDINDQVYDKDLSGNVYQ 58
Query: 58 RRLGGDVLPNN-------QKCRMETCFDFTKCIGDNFKVYIYPSNPDEE----PNTISSL 106
RR + PN+ +KCRMETCFD++KC + FK+Y+YP DE P S+
Sbjct: 59 RR---KLWPNDIDGKTIKEKCRMETCFDYSKCEKNGFKIYVYPQT-DESGIPLPLVPSAS 114
Query: 107 YQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWNNGKNH 166
YQK+++V+ ESRYYT DPSQAC+F+LAIDTLDRD LS++YV N+P ++ KL +WN G+NH
Sbjct: 115 YQKIINVIIESRYYTSDPSQACLFVLAIDTLDRDSLSNDYVRNLPLRIQKLPYWNKGRNH 174
Query: 167 IVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPG 226
++FNL+SGTWPDY EE+LGFD G +ILAKASMS HFR FDVSIPLF K+ E+GGE G
Sbjct: 175 VIFNLYSGTWPDYAEENLGFDYGFSILAKASMSTVHFRPNFDVSIPLFHKNHREKGGESG 234
Query: 227 AVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKD 286
V SNNFP+ KKY+LAFKGKRYV+GIGSE RNSLYHLHN DMVLVTTCKHGK+W E KD
Sbjct: 235 YVSSNNFPVIKKYVLAFKGKRYVHGIGSETRNSLYHLHNEKDMVLVTTCKHGKSWKEMKD 294
Query: 287 GRCSVDNAMYD 297
RC DN YD
Sbjct: 295 ERCDEDNQEYD 305
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Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66517433|ref|XP_391845.2| PREDICTED: exostosin-1 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307197832|gb|EFN78943.1| Exostosin-1 [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|332017043|gb|EGI57842.1| Exostosin-1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|307177266|gb|EFN66444.1| Exostosin-1 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|383847108|ref|XP_003699197.1| PREDICTED: exostosin-1-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|340719750|ref|XP_003398310.1| PREDICTED: exostosin-1-like isoform 1 [Bombus terrestris] gi|340719752|ref|XP_003398311.1| PREDICTED: exostosin-1-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|194883052|ref|XP_001975618.1| GG20465 [Drosophila erecta] gi|190658805|gb|EDV56018.1| GG20465 [Drosophila erecta] | Back alignment and taxonomy information |
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| >gi|118781611|ref|XP_311558.3| AGAP010388-PA [Anopheles gambiae str. PEST] gi|116130033|gb|EAA07205.3| AGAP010388-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
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| >gi|380027202|ref|XP_003697318.1| PREDICTED: exostosin-1-like [Apis florea] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 297 | ||||||
| FB|FBgn0020245 | 760 | ttv "tout-velu" [Drosophila me | 0.818 | 0.319 | 0.621 | 4.3e-94 | |
| UNIPROTKB|F1PTN7 | 746 | EXT1 "Uncharacterized protein" | 0.848 | 0.337 | 0.556 | 1.3e-82 | |
| UNIPROTKB|A5D7I4 | 746 | EXT1 "Exostosin-1" [Bos taurus | 0.848 | 0.337 | 0.556 | 2.8e-82 | |
| UNIPROTKB|Q16394 | 746 | EXT1 "Exostosin-1" [Homo sapie | 0.848 | 0.337 | 0.556 | 3.6e-82 | |
| MGI|MGI:894663 | 746 | Ext1 "exostoses (multiple) 1" | 0.848 | 0.337 | 0.552 | 7.4e-82 | |
| UNIPROTKB|G3V901 | 746 | Ext1 "Similar to Ext1" [Rattus | 0.848 | 0.337 | 0.552 | 7.4e-82 | |
| UNIPROTKB|Q9JK82 | 746 | EXT1 "Exostosin-1" [Cricetulus | 0.848 | 0.337 | 0.548 | 4e-81 | |
| ZFIN|ZDB-GENE-050211-4 | 741 | ext1b "exostoses (multiple) 1b | 0.868 | 0.348 | 0.530 | 7.4e-80 | |
| UNIPROTKB|F1NYD7 | 696 | LOC100858205 "Uncharacterized | 0.808 | 0.344 | 0.581 | 7.1e-77 | |
| ZFIN|ZDB-GENE-050211-3 | 730 | ext1a "exostoses (multiple) 1a | 0.973 | 0.395 | 0.496 | 5e-76 |
| FB|FBgn0020245 ttv "tout-velu" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 839 (300.4 bits), Expect = 4.3e-94, Sum P(2) = 4.3e-94
Identities = 159/256 (62%), Positives = 185/256 (72%)
Query: 46 NHEKDIESSPYLRRLGGDVLPNNQKCRMETCFDFTKCIGDNFKVYIYPSNP----DEEPN 101
N K ++SS +L + CRMETCFDFT+C D F VYIYP P P
Sbjct: 71 NQSKSLDSSKHL-------VTRKPDCRMETCFDFTRCY-DRFLVYIYPPEPLNSLGAAPP 122
Query: 102 TISSLYQKVLDVVKESRYYTDDPSQACIFILAIDTLDRDPLSSNYVHNVPSKLLKLKHWN 161
T S+ YQK+L ++ESRYYT DP+ AC+F+L IDTLDRD LS +YV NVPS+L +L +WN
Sbjct: 123 T-SANYQKILTAIQESRYYTSDPTAACLFVLGIDTLDRDSLSEDYVRNVPSRLARLPYWN 181
Query: 162 NGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPER 221
NG+NHI+FNL+SGTWPDY E LGFD G+AILAKASM V R GFDVSIPLF K P R
Sbjct: 182 NGRNHIIFNLYSGTWPDYAENSLGFDAGEAILAKASMGVLQLRHGFDVSIPLFHKQFPLR 241
Query: 222 GGEPGAVISNNFPLRKKYILAFKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNW 281
G G V SNNFP KKY+LAFKGKRYV+GIGSE RNSL+HLHNG DMVLVTTC+HGK+W
Sbjct: 242 AGATGTVQSNNFPANKKYLLAFKGKRYVHGIGSETRNSLFHLHNGRDMVLVTTCRHGKSW 301
Query: 282 AENKDGRCSVDNAMYD 297
E +D RC DN YD
Sbjct: 302 RELQDNRCDEDNREYD 317
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| UNIPROTKB|F1PTN7 EXT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A5D7I4 EXT1 "Exostosin-1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q16394 EXT1 "Exostosin-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:894663 Ext1 "exostoses (multiple) 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G3V901 Ext1 "Similar to Ext1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9JK82 EXT1 "Exostosin-1" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050211-4 ext1b "exostoses (multiple) 1b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NYD7 LOC100858205 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050211-3 ext1a "exostoses (multiple) 1a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 297 | |||
| pfam03016 | 292 | pfam03016, Exostosin, Exostosin family | 2e-28 |
| >gnl|CDD|217320 pfam03016, Exostosin, Exostosin family | Back alignment and domain information |
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Score = 110 bits (277), Expect = 2e-28
Identities = 50/227 (22%), Positives = 79/227 (34%), Gaps = 33/227 (14%)
Query: 83 IGDNFKVYIYP------------SNPDEEPNTISSLYQKVLDVVKESRYYTDDPSQACIF 130
KVY+Y + + + SR T DP +A +F
Sbjct: 1 SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNSRCRTLDPDEADLF 60
Query: 131 ILAIDTLDRD----PLSSNYVHNVPSKLLKLKHWN--NGKNHIVFNL--FSGTWPDYLEE 182
+ T + L L +WN G++HI+ N F G+ D L
Sbjct: 61 FVPFYTSLSVGTNAVERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPFGGSAFDRL-P 119
Query: 183 DLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPERGGEPGAVISNNFPLRKKYILA 242
L +T A+LA S FR GFDV +P + E + + ++K +L
Sbjct: 120 ALNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPNSVDDLESDGMPPS----KRKTLLF 175
Query: 243 FKGKRYVYGIGSEVRNSLYHLHNGADMVLVTTCKHGKNWAENKDGRC 289
F G G G+ L N +L+ CK+ ++ + C
Sbjct: 176 FAGGPRPAGKGA--------LANAIRDLLIEECKNSPDFQCEGNQSC 214
|
The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 297 | |||
| KOG2264|consensus | 907 | 99.97 | ||
| KOG1022|consensus | 691 | 99.96 | ||
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 99.91 | |
| KOG1021|consensus | 464 | 99.57 | ||
| KOG1021|consensus | 464 | 95.44 |
| >KOG2264|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-31 Score=258.75 Aligned_cols=173 Identities=25% Similarity=0.528 Sum_probs=138.6
Q ss_pred CCCCCCCcccccccccCcC-CCCCcEEEeCCCCCCCCCCccHHH--HHHHHHhhcCCccCCCCCCceEEEeeccCCCCCC
Q psy16948 65 LPNNQKCRMETCFDFTKCI-GDNFKVYIYPSNPDEEPNTISSLY--QKVLDVVKESRYYTDDPSQACIFILAIDTLDRDP 141 (297)
Q Consensus 65 ~~~~~~C~m~tCFD~sRC~-~~~fkVYVYp~~~~~~~~p~s~~y--~~il~~i~~S~y~T~dP~eACLFv~~id~l~~d~ 141 (297)
+.+.+.|+|++|||||||+ +++|+||||..+....|... .+| +.|.+.|..+-|.|+||+.|||+++.++++..-.
T Consensus 173 p~~~~~c~lhncfdySRCsltSgfPVYvyd~D~~~~G~~~-d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lvge~q~P~ 251 (907)
T KOG2264|consen 173 PSQISPCQLHNCFDYSRCSLTSGFPVYVYDSDIITSGQSE-DEWLKQVFQETIPNNVYLVETPDKACIYIHLVGEIQSPV 251 (907)
T ss_pred ccccCcccchhccccccccccCCceeEEeccceeecccch-HHHHHHHHHHhcccceeEeeCCCccEEEEEEeccccCCC
Confidence 3566889999999999999 89999999998875544332 334 3456668889999999999999999999875432
Q ss_pred CCcccccchhhhhhcCCCCC-CCCCeEEEEccCCCCCCccccccCCCCCcEEEEeecCCccccccCCceeccCCCCCCCC
Q psy16948 142 LSSNYVHNVPSKLLKLKHWN-NGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVTHFRTGFDVSIPLFQKDLPE 220 (297)
Q Consensus 142 l~~~yv~~~~~~l~~lPyWN-~GrNHlifnl~~~~~P~~~~~~l~~~~g~AIla~As~s~~~fRpgFDVSlPl~~~~~p~ 220 (297)
... --. .++|-+||||. +|+||+|||+.+. .+.++....+++|+||++|++|...+||||||..+|.+. |+
T Consensus 252 ~l~--p~e-leklyslp~w~~dg~Nhvl~Nl~r~--s~~~n~lyn~~t~raivvQssf~~~q~RpgfDl~V~pv~--h~- 323 (907)
T KOG2264|consen 252 VLT--PAE-LEKLYSLPHWRTDGFNHVLFNLGRP--SDTQNLLYNFQTGRAIVVQSSFYTVQIRPGFDLPVDPVN--HI- 323 (907)
T ss_pred cCC--hHh-hhhhhcCccccCCCcceEEEEccCc--cccccceeEeccCceEEEeecceeeeeccCCCcccCccc--cc-
Confidence 111 011 25588999999 9999999999733 345555567899999999999999999999999997554 34
Q ss_pred CCCCCCccccCCCCCCcceEEEeecc
Q psy16948 221 RGGEPGAVISNNFPLRKKYILAFKGK 246 (297)
Q Consensus 221 ~gg~~~~~~~~~~P~~RkyLl~f~Gk 246 (297)
.++..+...+.+.|.+||||++|+||
T Consensus 324 ~~e~~~~e~~p~vP~~RkyL~t~qgk 349 (907)
T KOG2264|consen 324 AVEKNFVELTPLVPFQRKYLITLQGK 349 (907)
T ss_pred ccCccceecCcccchhhheeEEEEee
Confidence 56777888999999999999999996
|
|
| >KOG1022|consensus | Back alignment and domain information |
|---|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
| >KOG1021|consensus | Back alignment and domain information |
|---|
| >KOG1021|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 297 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 106/312 (33%)
Query: 25 YRLKHKQTKVLDEFSEDWIDLNHEKD-----IESSPYLRRLGGDVLPNNQKCRMETCFDF 79
Y++ T D S + ++ + ++S PY L VL N Q + F+
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLLNVQNAKAWNAFNL 264
Query: 80 TKC-------------IGDNFKVYIYPSNPDEEPNTIS---SLYQKVLDVVKESRYYTDD 123
C + T SL K LD + D
Sbjct: 265 -SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-----DL 318
Query: 124 PSQAC------IFILA----------------------------IDTLDRDPLSSNYVH- 148
P + + I+A ++ L+ +
Sbjct: 319 PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 149 -------NVPSKLLKLKHWNNGKNHIVFNLFSGTWPDYLEEDLGFDTGQAILAKASMSVT 201
++P+ LL L W D ++ D+ + L K S+
Sbjct: 379 SVFPPSAHIPTILLSL-----------------IWFDVIKSDVMVVVNK--LHKYSLVEK 419
Query: 202 HFRTGFDVSIPLFQKDLPERGGEPGAV---ISNNFPLRKKY----ILAFKGKRYVYG-IG 253
+ +SIP +L + A+ I +++ + K + ++ +Y Y IG
Sbjct: 420 QPKE-STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
Query: 254 SEVRNSLYHLHN 265
+HL N
Sbjct: 479 -------HHLKN 483
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00