Psyllid ID: psy16987

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHccccccEEEEcHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHcccccEEccHHHHEccccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MTGRGVYSSVVLIAVGVYFnslggdlvhDDIVALARnqdvlggtsvgqmftndfwgtplsdpashksyrplttlTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Flexible Loop (DISEMBL)
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILwenflsdtehakrcva
Low Complexity Region (SEG)
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Disordered region (IsUnstruct)
*****VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLS**********
Disordered Region (DISOPRED)
**GRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Disordered Region (DISEMBL)
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Disordered Region (DISPRO)
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTGRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
Q8BRH0	920	Transmembrane and TPR rep	no	N/A	0.618	0.073	0.5	3e-14
Q6ZXV5	915	Transmembrane and TPR rep	yes	N/A	0.618	0.074	0.5	3e-14
Q9V3X5	938	Transmembrane and TPR rep	yes	N/A	0.590	0.069	0.523	7e-14
Q56A06	836	Transmembrane and TPR rep	no	N/A	0.590	0.077	0.492	7e-13
Q8N394	836	Transmembrane and TPR rep	no	N/A	0.590	0.077	0.492	8e-13
Q7K4B6	926	Transmembrane and TPR rep	no	N/A	0.545	0.064	0.55	1e-12
Q3UV71	942	Transmembrane and TPR rep	no	N/A	0.545	0.063	0.540	4e-12
Q5T4D3	741	Transmembrane and TPR rep	no	N/A	0.590	0.087	0.476	1e-11
Q8BG19	741	Transmembrane and TPR rep	no	N/A	0.618	0.091	0.455	2e-11
Q6DCD5	836	Transmembrane and TPR rep	N/A	N/A	0.5	0.065	0.545	4e-11

>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus GN=Tmtc3 PE=2 SV=2

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query: 10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
          +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct: 17 IVSVVAACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 76

Query: 70 PLTTLTFR 77
          PLT LTFR
Sbjct: 77 PLTVLTFR 84

Mus musculus (taxid: 10090)

>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query: 10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
          +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct: 12 IVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 71

Query: 70 PLTTLTFR 77
          PLT LTFR
Sbjct: 72 PLTVLTFR 79

Homo sapiens (taxid: 9606)

>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341 OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/65 (52%), Positives = 44/65 (67%)

Query: 13  IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
           +A  +Y N+LG   V+DD  A+  N DV GGT   + F+NDFWGTPL+D  SH S+RPL 
Sbjct: 41  LAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC 100

Query: 73  TLTFR 77
            L+FR
Sbjct: 101 VLSFR 105

Drosophila melanogaster (taxid: 7227)

>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus GN=Tmtc2 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 13 IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
          + + +Y N+L  D  +DD  A+  NQD+L  T    +F NDFWGT L+   SHKSYRPL 
Sbjct: 10 LGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLC 69

Query: 73 TLTFR 77
          TL+FR
Sbjct: 70 TLSFR 74

Mus musculus (taxid: 10090)

>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 13 IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
          + + +Y N+L  D  +DD  A+  NQD+L  T    +F NDFWGT L+   SHKSYRPL 
Sbjct: 10 LGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLC 69

Query: 73 TLTFR 77
          TL+FR
Sbjct: 70 TLSFR 74

Homo sapiens (taxid: 9606)

>sp|Q7K4B6|TMTC3_DROME Transmembrane and TPR repeat-containing protein CG4050 OS=Drosophila melanogaster GN=CG4050 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/60 (55%), Positives = 40/60 (66%)

Query: 18  YFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFR 77
           Y+NS    LV DDI A+  N+D+   T +  +F NDFWGTP+    SHKSYRPLT LTFR
Sbjct: 48  YYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFLNDFWGTPMRKEQSHKSYRPLTVLTFR 107

Drosophila melanogaster (taxid: 7227)

>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus GN=Tmtc1 PE=2 SV=2

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 18  YFNSLGGDLVHDDIVALARNQDVLGGTSVG-QMFTNDFWGTPLSDPASHKSYRPLTTLTF 76
           Y  SL G+ VHDD+ A+  N DV  GT +   +F NDFWG  L+D  SHKSYRPL  L+F
Sbjct: 40  YGRSLRGEFVHDDVWAIVNNPDVRPGTPLRWAIFANDFWGKGLADSTSHKSYRPLCVLSF 99

Query: 77  R 77
           R
Sbjct: 100 R 100

Mus musculus (taxid: 10090)

>sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=2 SV=2

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/65 (47%), Positives = 42/65 (64%)

Query: 13 IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
          +A+  +  S  GD V DD  A+  N+D+   T +G ++ +DFWG+ LS   SHKSYRPLT
Sbjct: 29 VAIVCFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWHHDFWGSRLSSNTSHKSYRPLT 88

Query: 73 TLTFR 77
           LTFR
Sbjct: 89 VLTFR 93

Homo sapiens (taxid: 9606)

>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 43/68 (63%)

Query: 10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
          V  +++  +  S  GD V DD  A+  N+D+   T +G ++ +DFWG+ LS   SHKSYR
Sbjct: 25 VGFVSLLCFARSYDGDFVFDDSEAIVNNKDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYR 84

Query: 70 PLTTLTFR 77
          PLT LTFR
Sbjct: 85 PLTVLTFR 92

Mus musculus (taxid: 10090)

>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis GN=tmtc2 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 36/55 (65%)

Query: 23 GGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFR 77
          G D  +DD  A+  NQD+L  T    +F NDFWGT L+   SHKSYRPL TL+FR
Sbjct: 20 GADFCYDDSRAIKTNQDLLPETPWNHIFFNDFWGTLLTHSGSHKSYRPLCTLSFR 74

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
340729314	752	PREDICTED: transmembrane and TPR repeat-	0.918	0.134	0.504	6e-21
110757368	187	PREDICTED: transmembrane and TPR repeat-	0.890	0.524	0.5	1e-20
345482796	296	PREDICTED: transmembrane and TPR repeat-	0.654	0.243	0.638	1e-20
312382697	197	hypothetical protein AND_04438 [Anophele	0.818	0.456	0.531	2e-19
383859937	192	PREDICTED: transmembrane and TPR repeat-	0.918	0.526	0.476	5e-19
270001551	743	hypothetical protein TcasGA2_TC000396 [T	0.654	0.096	0.597	3e-18
189234732	684	PREDICTED: similar to smile protein [Tri	0.654	0.105	0.597	3e-18
328703926	749	PREDICTED: transmembrane and TPR repeat-	0.545	0.080	0.733	5e-18
242012125	139	smile protein, putative [Pediculus human	0.663	0.525	0.561	9e-18
332022189	193	Transmembrane and TPR repeat-containing	0.681	0.388	0.56	1e-17

>gi|340729314|ref|XP_003402949.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Bombus terrestris]

 Score =  104 bits (260), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 6/107 (5%)

Query: 3   GRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDP 62
           G  +Y++V L+AVG Y N+LGGD VHDDI A+ RN+DVLG T    +  +DFWGTP+ D 
Sbjct: 31  GWCIYATVALVAVGCYLNALGGDFVHDDIPAVVRNKDVLGQTPWTSILKDDFWGTPMHDI 90

Query: 63  ASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCV 109
            SHKSYRPLTTLTFR    +S    S      W +  +   HA  CV
Sbjct: 91  NSHKSYRPLTTLTFRLNYLMSGLTPS------WYHATNIALHAIACV 131

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110757368|ref|XP_001120504.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Apis mellifera]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 6/104 (5%)

Query: 6   VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASH 65
           +Y++V L+AV  Y N+LGGD VHDDI A+ RN+DVL  T +  +  NDFWGTP+ D  SH
Sbjct: 32  IYATVALVAVACYLNALGGDFVHDDIPAVVRNKDVLAQTPLTTLLKNDFWGTPMRDVNSH 91

Query: 66  KSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCV 109
           KSYRPLTTLTFR    +S   +S      W +  +   HA  CV
Sbjct: 92  KSYRPLTTLTFRLNYLMSGLTTS------WYHATNIALHAIACV 129

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482796|ref|XP_003424665.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Nasonia vitripennis]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 59/72 (81%)

Query: 6   VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASH 65
           +Y++V L+A+G Y N+LGGD VHDDI A+ RN+DVL  +S+  +  +DFWGTP+ DPASH
Sbjct: 52  IYAAVGLVALGAYLNALGGDFVHDDIPAIVRNKDVLAQSSLLSLLKDDFWGTPMHDPASH 111

Query: 66  KSYRPLTTLTFR 77
           KSYRPLTTLTFR
Sbjct: 112 KSYRPLTTLTFR 123

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312382697|gb|EFR28066.1| hypothetical protein AND_04438 [Anopheles darlingi]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 4/94 (4%)

Query: 6   VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASH 65
           +Y  V LIA   Y N + GD VHDD+ A+  N+DVLG + VGQ+F NDFWGTP++D +SH
Sbjct: 82  MYPLVGLIAALCYLNGIHGDFVHDDVPAITLNKDVLGHSPVGQVFRNDFWGTPMADLSSH 141

Query: 66  KSYRPLTTLTFRTVLGISS-CVSSRLRTILWENF 98
           KSYRPLTTLTFR     S+ C+   L   LW ++
Sbjct: 142 KSYRPLTTLTFRISNSCSTICLPGEL---LWPDY 172

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859937|ref|XP_003705448.1| PREDICTED: transmembrane and TPR repeat-containing protein 3-like [Megachile rotundata]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 6/107 (5%)

Query: 3   GRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDP 62
           G  +Y++V L+AV  Y N+L GD VHDDI A+ RN+DVL  T    +F +DFWGTP+ D 
Sbjct: 34  GWCLYATVALVAVACYLNALNGDFVHDDIPAIVRNKDVLAQTPWTSIFNDDFWGTPMHDV 93

Query: 63  ASHKSYRPLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCV 109
            SHKSYRP TTLTFR    +S    S      W +  +   HA  CV
Sbjct: 94  NSHKSYRPFTTLTFRLNYLMSGLTPS------WYHATNIALHAIACV 134

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270001551|gb|EEZ97998.1| hypothetical protein TcasGA2_TC000396 [Tribolium castaneum]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 50/72 (69%)

Query: 6  VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASH 65
          +YS V  +AV  Y N L GD VHDDI A+  N+DVL    +   F NDFWGTP++D ASH
Sbjct: 19 IYSLVSTVAVACYLNGLNGDFVHDDIPAVTLNKDVLAINPISHAFKNDFWGTPMADLASH 78

Query: 66 KSYRPLTTLTFR 77
          KSYRPLT LTFR
Sbjct: 79 KSYRPLTILTFR 90

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234732|ref|XP_973900.2| PREDICTED: similar to smile protein [Tribolium castaneum]

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 50/72 (69%)

Query: 6  VYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASH 65
          +YS V  +AV  Y N L GD VHDDI A+  N+DVL    +   F NDFWGTP++D ASH
Sbjct: 19 IYSLVSTVAVACYLNGLNGDFVHDDIPAVTLNKDVLAINPISHAFKNDFWGTPMADLASH 78

Query: 66 KSYRPLTTLTFR 77
          KSYRPLT LTFR
Sbjct: 79 KSYRPLTILTFR 90

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703926|ref|XP_001943258.2| PREDICTED: transmembrane and TPR repeat-containing protein 1-like [Acyrthosiphon pisum]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/60 (73%), Positives = 49/60 (81%)

Query: 18  YFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFR 77
           Y+N L GD VHDDI A+A N DVLG  S+ ++ TNDFWGTPLSDP SHKSYRPLTTLTFR
Sbjct: 68  YWNGLRGDFVHDDIPAVAMNADVLGTGSLARVATNDFWGTPLSDPNSHKSYRPLTTLTFR 127

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012125|ref|XP_002426791.1| smile protein, putative [Pediculus humanus corporis] gi|212510973|gb|EEB14053.1| smile protein, putative [Pediculus humanus corporis]

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 41/73 (56%), Positives = 51/73 (69%)

Query: 7   YSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHK 66
           YS V  +A   Y N+  GD VHDDI A+ RN+DV G T + Q+  NDFWGT +SDP+SHK
Sbjct: 64  YSIVACVAFICYLNAFFGDFVHDDIPAITRNRDVTGQTPILQVLKNDFWGTAMSDPSSHK 123

Query: 67  SYRPLTTLTFRTV 79
           SYRPLTT +F  +
Sbjct: 124 SYRPLTTFSFSKI 136

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022189|gb|EGI62506.1| Transmembrane and TPR repeat-containing protein 3 [Acromyrmex echinatior]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/75 (56%), Positives = 53/75 (70%)

Query: 3   GRGVYSSVVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDP 62
           G  +Y++V L+AVG Y N+L  D VHDDI A+ RN+DV+G  S   +  +DFWGTP+   
Sbjct: 35  GWCIYAAVALVAVGCYLNALDCDFVHDDIPAVVRNRDVIGEASWSSVLNDDFWGTPMESI 94

Query: 63  ASHKSYRPLTTLTFR 77
            SHKSYRP TTLTFR
Sbjct: 95  NSHKSYRPFTTLTFR 109

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
UNIPROTKB|F8W044	148	TMTC3 "Transmembrane and TPR r	0.618	0.459	0.5	7.9e-14
UNIPROTKB|E1C3P5	921	TMTC3 "Uncharacterized protein	0.854	0.102	0.41	7.7e-13
MGI|MGI:3036255	920	Tmtc3 "transmembrane and tetra	0.618	0.073	0.5	9.8e-13
UNIPROTKB|E2QUG9	915	TMTC3 "Uncharacterized protein	0.618	0.074	0.5	1.6e-12
UNIPROTKB|Q6ZXV5	915	TMTC3 "Transmembrane and TPR r	0.618	0.074	0.5	1.6e-12
RGD|1306351	920	Tmtc3 "transmembrane and tetra	0.618	0.073	0.5	1.6e-12
UNIPROTKB|F1SPX9	650	TMTC3 "Uncharacterized protein	0.618	0.104	0.5	2e-12
UNIPROTKB|E1BG63	920	TMTC3 "Uncharacterized protein	0.609	0.072	0.521	2.6e-12
FB|FBgn0028481	938	CG4341 [Drosophila melanogaste	0.590	0.069	0.523	2.7e-12
MGI|MGI:1914057	836	Tmtc2 "transmembrane and tetra	0.590	0.077	0.492	5.6e-12

UNIPROTKB|F8W044 TMTC3 "Transmembrane and TPR repeat-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    12 IVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 71

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    72 PLTVLTFR 79

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

UNIPROTKB|E1C3P5 TMTC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 182 (69.1 bits), Expect = 7.7e-13, P = 7.7e-13
 Identities = 41/100 (41%), Positives = 58/100 (58%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    12 IVGVVAACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKNLFQNDFWGTPMSEERSHKSYR 71

Query:    70 PLTTLTFRTVLGISSCVSSRLRTILWENFLSDTEHAKRCV 109
             PLT LTFR      + + S L  + + +FL+   H   CV
Sbjct:    72 PLTVLTFRL-----NYLFSELNAVSY-HFLNLIFHGVVCV 105

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

MGI|MGI:3036255 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Mus musculus (taxid:10090)]

 Score = 181 (68.8 bits), Expect = 9.8e-13, P = 9.8e-13
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    17 IVSVVAACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 76

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    77 PLTVLTFR 84

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009791 "post-embryonic development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IMP

GO:0030324 "lung development" evidence=IMP

GO:0048286 "lung alveolus development" evidence=IMP

GO:0048747 "muscle fiber development" evidence=IMP

GO:0060447 "bud outgrowth involved in lung branching" evidence=IMP

UNIPROTKB|E2QUG9 TMTC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 179 (68.1 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    12 IVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 71

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    72 PLTVLTFR 79

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|Q6ZXV5 TMTC3 "Transmembrane and TPR repeat-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    12 IVGVVTACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 71

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    72 PLTVLTFR 79

GO:0016021 "integral to membrane" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

RGD|1306351 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 179 (68.1 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    17 IVGVVAACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYR 76

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    77 PLTVLTFR 84

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010468 "regulation of gene expression" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=ISO

GO:0030324 "lung development" evidence=ISO

GO:0048286 "lung alveolus development" evidence=IEA;ISO

GO:0048747 "muscle fiber development" evidence=IEA;ISO

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA;ISO

UNIPROTKB|F1SPX9 TMTC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 176 (67.0 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 34/68 (50%), Positives = 45/68 (66%)

Query:    10 VVLIAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYR 69
             +V +    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHKSYR
Sbjct:    17 IVGLVAACYWNSLFCGFVFDDVSAILDNKDLHPTTPLKTLFQNDFWGTPMSEERSHKSYR 76

Query:    70 PLTTLTFR 77
             PLT LTFR
Sbjct:    77 PLTVLTFR 84

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|E1BG63 TMTC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 177 (67.4 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 37/71 (52%), Positives = 47/71 (66%)

Query:    11 VLIAVGV----YFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHK 66
             V + VGV    Y+NSL    V DD+ A+  N+D+   T +  +F NDFWGTP+S+  SHK
Sbjct:    14 VTLIVGVVAVCYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHK 73

Query:    67 SYRPLTTLTFR 77
             SYRPLT LTFR
Sbjct:    74 SYRPLTVLTFR 84

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

FB|FBgn0028481 CG4341 [Drosophila melanogaster (taxid:7227)]

 Score = 177 (67.4 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 34/65 (52%), Positives = 44/65 (67%)

Query:    13 IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
             +A  +Y N+LG   V+DD  A+  N DV GGT   + F+NDFWGTPL+D  SH S+RPL 
Sbjct:    41 LAFVLYLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLC 100

Query:    73 TLTFR 77
              L+FR
Sbjct:   101 VLSFR 105

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1914057 Tmtc2 "transmembrane and tetratricopeptide repeat containing 2" [Mus musculus (taxid:10090)]

 Score = 166 (63.5 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query:    13 IAVGVYFNSLGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLT 72
             + + +Y N+L  D  +DD  A+  NQD+L  T    +F NDFWGT L+   SHKSYRPL 
Sbjct:    10 LGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLC 69

Query:    73 TLTFR 77
             TL+FR
Sbjct:    70 TLSFR 74

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9V3X5	TMTC2_DROME	No assigned EC number	0.5230	0.5909	0.0692	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
KOG3356|consensus	147		90.89

>KOG3356|consensus

Probab=90.89  E-value=0.069  Score=38.96  Aligned_cols=48  Identities=23%  Similarity=0.254  Sum_probs=36.8

Q ss_pred             CCCCeeeecccccccCccccCCCChhhhhhcccCCCCCCCCCCCCCCchhhHHHHHHH--HhhcCCCcccc
Q psy16987         22 LGGDLVHDDIVALARNQDVLGGTSVGQMFTNDFWGTPLSDPASHKSYRPLTTLTFRTV--LGISSCVSSRL   90 (110)
Q Consensus        22 l~~~FVFDD~~aIv~N~~I~~~~~~~~lf~~dfWG~~~~~~~sh~syRPLt~LSFaln--y~l~Gl~~~~~   90 (110)
                      ..++|+||   .||+-|.|-+.+                  +-|++.||++.++.|.|  |-+.||++.-+
T Consensus        43 v~~g~iyd---vivepp~igs~~------------------d~~g~~rpv~fla~rvngqyimeglas~fl   92 (147)
T KOG3356|consen   43 VTGGIIYD---VIVEPPSIGSMT------------------DEHGHQRPVAFLAGRVNGQYIMEGLASSFL   92 (147)
T ss_pred             hcccEEEE---EEecCCCCCccc------------------ccCCcCcceEEEeccccceeeehhhcccce
Confidence            46899999   578888776522                  23678999999999998  77888876544

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00