Psyllid ID: psy16988


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100---
MDVVREWPTAVFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIEPAA
cccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHcccccccccccccc
cccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEcc
mdvvrewptavfekealtgdvesgksyQAQTISLLSRVVIQAFTLTFLaewgdrsqLTTIILAAREDvygvtlggvlghpavprtniipsglnppragiepaa
mdvvrewptavfekealtgdvesgKSYQAQTISLLSRVVIQAFTLTflaewgdrSQLTTIILAAREDVYGVTLGGVLGhpavprtniipsglnppragiepaa
MDVVREWPTAVFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIEPAA
******WPTAVFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNII***************
********************************SLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIE***
MDVVREWPTAVFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIEPAA
************************KSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIEPAA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDVVREWPTAVFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIEPAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query103 2.2.26 [Sep-21-2011]
Q9HC07324 Transmembrane protein 165 yes N/A 0.592 0.188 0.625 6e-16
Q4V899323 Transmembrane protein 165 yes N/A 0.582 0.185 0.619 4e-15
P52875323 Transmembrane protein 165 yes N/A 0.582 0.185 0.619 4e-15
Q10320287 GDT1-like protein C17G8.0 yes N/A 0.543 0.195 0.482 1e-09
P52876206 GDT1-like protein sll0615 N/A N/A 0.407 0.203 0.547 2e-08
B9G125232 GDT1-like protein 5 OS=Or yes N/A 0.466 0.206 0.520 3e-08
Q2R4J1279 GDT1-like protein 3 OS=Or no N/A 0.495 0.182 0.490 5e-08
A2ZE50279 GDT1-like protein 3 OS=Or N/A N/A 0.495 0.182 0.490 5e-08
Q9C6M1230 GDT1-like protein 4 OS=Ar yes N/A 0.563 0.252 0.448 8e-08
Q6ZIB9282 GDT1-like protein 4 OS=Or no N/A 0.407 0.148 0.547 9e-08
>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1 Back     alignment and function desciption
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 3/64 (4%)

Query: 19  GDVESGKSY---QAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGG 75
           GDVE+G S    Q + +  +S + +QA TLTFLAEWGDRSQLTTI+LAARED YGV +GG
Sbjct: 214 GDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGG 273

Query: 76  VLGH 79
            +GH
Sbjct: 274 TVGH 277





Homo sapiens (taxid: 9606)
>sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1 Back     alignment and function description
>sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2 Back     alignment and function description
>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1 Back     alignment and function description
>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1 Back     alignment and function description
>sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100 PE=2 SV=1 Back     alignment and function description
>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1 Back     alignment and function description
>sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3 SV=1 Back     alignment and function description
>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query103
322797829 288 hypothetical protein SINV_00386 [Solenop 0.660 0.236 0.648 4e-18
307166216 287 Transmembrane protein 165 [Camponotus fl 0.660 0.236 0.675 5e-18
380025642 253 PREDICTED: LOW QUALITY PROTEIN: transmem 0.669 0.272 0.666 7e-18
328790251 293 PREDICTED: transmembrane protein 165-lik 0.669 0.235 0.666 7e-18
345493212 290 PREDICTED: transmembrane protein 165-lik 0.660 0.234 0.662 8e-18
332025499 288 Transmembrane protein 165 [Acromyrmex ec 0.660 0.236 0.64 2e-17
350402658 293 PREDICTED: transmembrane protein 165-lik 0.669 0.235 0.653 2e-17
340711903 293 PREDICTED: transmembrane protein 165-lik 0.669 0.235 0.653 2e-17
307192724 241 Transmembrane protein 165 [Harpegnathos 0.660 0.282 0.643 3e-17
91081711 291 PREDICTED: similar to conserved hypothet 0.660 0.233 0.633 5e-17
>gi|322797829|gb|EFZ19737.1| hypothetical protein SINV_00386 [Solenopsis invicta] Back     alignment and taxonomy information
 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 59/74 (79%), Gaps = 6/74 (8%)

Query: 12  FEKEA---LTGDVESG---KSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAR 65
           +EKE    L  D E+G   K+ ++  + LLSR+++QAFTLTFLAEWGDRSQLTTIILAAR
Sbjct: 168 YEKETTSTLVQDPETGVIRKTTKSSALMLLSRILLQAFTLTFLAEWGDRSQLTTIILAAR 227

Query: 66  EDVYGVTLGGVLGH 79
           EDVYGV +GG+LGH
Sbjct: 228 EDVYGVVIGGILGH 241




Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166216|gb|EFN60446.1| Transmembrane protein 165 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380025642|ref|XP_003696578.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 165-like [Apis florea] Back     alignment and taxonomy information
>gi|328790251|ref|XP_623837.2| PREDICTED: transmembrane protein 165-like [Apis mellifera] Back     alignment and taxonomy information
>gi|345493212|ref|XP_001605345.2| PREDICTED: transmembrane protein 165-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|332025499|gb|EGI65662.1| Transmembrane protein 165 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|350402658|ref|XP_003486558.1| PREDICTED: transmembrane protein 165-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340711903|ref|XP_003394506.1| PREDICTED: transmembrane protein 165-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|307192724|gb|EFN75832.1| Transmembrane protein 165 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91081711|ref|XP_971334.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270006252|gb|EFA02700.1| hypothetical protein TcasGA2_TC008422 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query103
UNIPROTKB|F1P1B3254 TMEM165 "Uncharacterized prote 0.592 0.240 0.625 1.8e-16
UNIPROTKB|B4DHW1261 TMEM165 "cDNA FLJ60544, highly 0.592 0.233 0.625 3.7e-16
UNIPROTKB|I3LA04151 TMEM165 "Uncharacterized prote 0.592 0.403 0.625 4.7e-16
UNIPROTKB|Q9HC07324 TMEM165 "Transmembrane protein 0.592 0.188 0.625 5.7e-16
UNIPROTKB|E1B731324 TMEM165 "Uncharacterized prote 0.592 0.188 0.625 7.4e-16
UNIPROTKB|F1PU63325 TMEM165 "Uncharacterized prote 0.592 0.187 0.625 7.5e-16
MGI|MGI:894407323 Tmem165 "transmembrane protein 0.660 0.210 0.575 2.1e-15
RGD|1306983323 Tmem165 "transmembrane protein 0.660 0.210 0.575 2.1e-15
ZFIN|ZDB-GENE-030131-3222305 tmem165 "transmembrane protein 0.582 0.196 0.625 1.3e-14
FB|FBgn0260659503 CG42542 [Drosophila melanogast 0.621 0.127 0.606 1.5e-14
UNIPROTKB|F1P1B3 TMEM165 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 40/64 (62%), Positives = 50/64 (78%)

Query:    19 GDVESGKSY---QAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGG 75
             GDVE+G +    Q + +  +S + +QAFTLTFLAEWGDRSQLTTI+LAARED YGV +GG
Sbjct:   144 GDVETGSTATIPQKKWLHFISPIFVQAFTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGG 203

Query:    76 VLGH 79
              +GH
Sbjct:   204 TVGH 207




GO:0016020 "membrane" evidence=IEA
UNIPROTKB|B4DHW1 TMEM165 "cDNA FLJ60544, highly similar to Transmembrane protein TPARL" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|I3LA04 TMEM165 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HC07 TMEM165 "Transmembrane protein 165" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1B731 TMEM165 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PU63 TMEM165 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:894407 Tmem165 "transmembrane protein 165" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306983 Tmem165 "transmembrane protein 165" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3222 tmem165 "transmembrane protein 165" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0260659 CG42542 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4V899TM165_RATNo assigned EC number0.61900.58250.1857yesN/A
Q9HC07TM165_HUMANNo assigned EC number0.6250.59220.1882yesN/A
P52875TM165_MOUSENo assigned EC number0.61900.58250.1857yesN/A
B9G125GDT15_ORYSJNo assigned EC number0.52080.46600.2068yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query103
COG2119190 COG2119, COG2119, Predicted membrane protein [Func 4e-10
pfam0116978 pfam01169, UPF0016, Uncharacterized protein family 5e-10
>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown] Back     alignment and domain information
 Score = 53.5 bits (129), Expect = 4e-10
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 38  VVIQAFTLTFLAEWGDRSQLTTIILAARE-DVYGVTLGGVLGH 79
           V +  F   FLAE GD++Q+ TI LAA     + V  G  LG 
Sbjct: 101 VFVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGM 143


Length = 190

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 103
KOG2881|consensus294 99.87
PF0116978 UPF0016: Uncharacterized protein family UPF0016; I 99.86
COG2119190 Predicted membrane protein [Function unknown] 99.81
COG2119 190 Predicted membrane protein [Function unknown] 99.67
KOG2881|consensus 294 99.36
>KOG2881|consensus Back     alignment and domain information
Probab=99.87  E-value=2.3e-22  Score=160.12  Aligned_cols=72  Identities=40%  Similarity=0.681  Sum_probs=68.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHhhccCccEEeehHHHHHHHhhhHHHhhcccCCCCCCCC
Q psy16988         29 AQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLGGVLGHPAVPRTNIIPSGLNPPRAGIE  100 (103)
Q Consensus        29 ~~~~~~~~~~~~~sf~liflAElGDKTQL~ti~LA~r~~~~~V~~G~~la~~l~t~lav~~G~~l~~~ip~~  100 (103)
                      +....+++++|+++|.++|++||||||||+|++||++.|+++|++|+.+||.+||.+||+.|++++++|+++
T Consensus       199 ~~~t~ffspifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~lAskIS~r  270 (294)
T KOG2881|consen  199 RKLTLFFSPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKYLASKISVR  270 (294)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHHHhhhheeE
Confidence            456677899999999999999999999999999999999999999999999999999999999999999875



>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities Back     alignment and domain information
>COG2119 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2119 Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG2881|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00