Psyllid ID: psy17021

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE
Secondary Structure (PSIPRED)
ccEEEEccccccEEEEEccccEEEEEEEcEEEEEEccHHHHHHcccccEEEEcEEEEEEEEEEEEcccccccccEEEEEEEEccccEEEEcccccEEEEEEccEEEEEEccccEEEEEEEEcccccEEEEEEEEccEEEEEEccccEEEEEEEccccEEEEEEcccccEEEEEEEEEEccEEEEEcccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccHHHcccccEEEEEccccEEEEcccHHHHHHHHHccccccccEEEEEEEEEEccccEEcccEEEEEEEcccccccHHHHHcccEEEEEEccEEEEEEccHHHHHHHHHccccccEEEEEEEcccEEEEEccccEEEEEEEccccccEEEEHcccccccEEEEEEEccccEEEEcccccEEEEEcccc
Coil and Loop (DISEMBL)
mefvhktsvdevpyamcpfqgaLLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQththsgrsdrlvgNAMEFVhktsvdevpyamcpfqgaLLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMghriyvsdvqESVFLVRYKRYENQLlifaddtqprwittscvldyntvasadkfGNVCIVSTYRE
Flexible Loop (DISEMBL)
mefvhktsvdevpyaMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIkgfrkahqththsgrsdrlvgNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLlifaddtqprWITTSCVLdyntvasadkfgnvcivstyre
Low Complexity Region (SEG)
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE
Disordered region (IsUnstruct)
********VDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAH**********RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST***
Disordered Region (DISOPRED)
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR*
Disordered Region (DISEMBL)
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKG**************DRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE
Disordered Region (DISPRO)
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
Q1LVE8	1217	Splicing factor 3B subuni	yes	N/A	0.618	0.101	0.699	1e-50
Q921M3	1217	Splicing factor 3B subuni	yes	N/A	0.613	0.100	0.682	5e-48
Q5RBI5	1217	Splicing factor 3B subuni	yes	N/A	0.613	0.100	0.682	5e-48
Q15393	1217	Splicing factor 3B subuni	yes	N/A	0.613	0.100	0.682	5e-48
A0JN52	1217	Splicing factor 3B subuni	yes	N/A	0.613	0.100	0.682	5e-48
Q54SA7	1256	Probable splicing factor	yes	N/A	0.582	0.092	0.577	2e-39
Q4PGM6	1221	Pre-mRNA-splicing factor	N/A	N/A	0.618	0.100	0.520	9e-36
P0CR22	1217	Pre-mRNA-splicing factor	yes	N/A	0.613	0.100	0.544	2e-33
P0CR23	1217	Pre-mRNA-splicing factor	N/A	N/A	0.613	0.100	0.544	2e-33
Q7RYR4	1209	Pre-mRNA-splicing factor	N/A	N/A	0.819	0.134	0.409	2e-32

>sp|Q1LVE8|SF3B3_DANRE Splicing factor 3B subunit 3 OS=Danio rerio GN=sf3b3 PE=2 SV=1

 Score =  199 bits (505), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 109/123 (88%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+  I
Sbjct: 934  GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             ++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct: 994  HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.
Danio rerio (taxid: 7955)

>sp|Q921M3|SF3B3_MOUSE Splicing factor 3B subunit 3 OS=Mus musculus GN=Sf3b3 PE=2 SV=1

 Score =  190 bits (483), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct: 934  GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994  QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.

Mus musculus (taxid: 10090)

>sp|Q5RBI5|SF3B3_PONAB Splicing factor 3B subunit 3 OS=Pongo abelii GN=SF3B3 PE=2 SV=1

 Score =  190 bits (483), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct: 934  GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994  QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.

Pongo abelii (taxid: 9601)

>sp|Q15393|SF3B3_HUMAN Splicing factor 3B subunit 3 OS=Homo sapiens GN=SF3B3 PE=1 SV=4

 Score =  190 bits (483), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct: 934  GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994  QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.

Homo sapiens (taxid: 9606)

>sp|A0JN52|SF3B3_BOVIN Splicing factor 3B subunit 3 OS=Bos taurus GN=SF3B3 PE=2 SV=1

 Score =  190 bits (483), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct: 934  GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct: 994  QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.

Bos taurus (taxid: 9913)

>sp|Q54SA7|SF3B3_DICDI Probable splicing factor 3B subunit 3 OS=Dictyostelium discoideum GN=sf3b3 PE=3 SV=1

 Score =  162 bits (409), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 95/123 (77%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +E ++KT V+E  YAM  FQG L+ GVG+ +R+YD+GKKKLLRKCE K+LPN IV I
Sbjct: 973  GKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKLLRKCETKNLPNTIVNI 1032

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             S+G R+ V D+QES+  ++YKR EN L +FADD  PRW+T+S +LDY+TVA ADKFGN+
Sbjct: 1033 HSLGDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNI 1092

Query: 192  CIV 194
             ++
Sbjct: 1093 FVL 1095

Involved in pre-mRNA splicing. Probable subunit of a splicing factor complex and spliceosomes.

Dictyostelium discoideum (taxid: 44689)

>sp|Q4PGM6|RSE1_USTMA Pre-mRNA-splicing factor RSE1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=RSE1 PE=3 SV=1

 Score =  149 bits (377), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 90/123 (73%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +E +HKT VD++P  +  FQG LL G+G+ LR+YDLGKKKLLRKCEN+  P  +V +
Sbjct: 937  GRELELLHKTEVDDIPLVLRAFQGRLLAGIGKALRIYDLGKKKLLRKCENRSFPTAVVSL 996

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            ++ G RI V D+QES+    YK  EN+L+ FADD  P+++T   +LDY+TVA+ADKFGN+
Sbjct: 997  DAQGSRIVVGDMQESIIFASYKPLENRLVTFADDVMPKFVTRCTMLDYDTVAAADKFGNI 1056

Query: 192  CIV 194
             ++
Sbjct: 1057 YVL 1059

Involved in pre-mRNA splicing and cell cycle control.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|P0CR22|RSE1_CRYNJ Pre-mRNA-splicing factor RSE1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=RSE1 PE=3 SV=1

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT  D++P  +  FQG LL G+G+ LRLY++GKK LLRKCEN   P  +V I
Sbjct: 933  GRILEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTAVVTI 992

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
               G RI V D+QES F   Y+     QLLIFADD+QPRWIT    +DY TVA  DKFGN
Sbjct: 993  NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1052

Query: 191  VCI 193
            + I
Sbjct: 1053 IFI 1055

Involved in pre-mRNA splicing and cell cycle control.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CR23|RSE1_CRYNB Pre-mRNA-splicing factor RSE1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=RSE1 PE=3 SV=1

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT  D++P  +  FQG LL G+G+ LRLY++GKK LLRKCEN   P  +V I
Sbjct: 933  GRILEFLHKTKTDDIPLCLAGFQGFLLAGIGKSLRLYEMGKKALLRKCENNGFPTAVVTI 992

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
               G RI V D+QES F   Y+     QLLIFADD+QPRWIT    +DY TVA  DKFGN
Sbjct: 993  NVQGARIIVGDMQESTFYCVYRSIPTRQLLIFADDSQPRWITCVTSVDYETVACGDKFGN 1052

Query: 191  VCI 193
            + I
Sbjct: 1053 IFI 1055

Involved in pre-mRNA splicing and cell cycle control.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|Q7RYR4|RSE1_NEUCR Pre-mRNA-splicing factor rse-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rse-1 PE=3 SV=2

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 107/183 (58%), Gaps = 20/183 (10%)

Query: 12   VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV 71
            VP+A    +  L+VG G+ + L            + +   +G+   ++ H          
Sbjct: 886  VPFASQEGESFLVVGTGKDMVL------------DPRQFTEGYIHVYRFHED-------- 925

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G  +EF+HKT V+E P A+ PFQG LL GVG+ LR+YDLG K+LLRK +    P LIV +
Sbjct: 926  GRDLEFIHKTRVEEPPLALIPFQGRLLAGVGKTLRIYDLGLKQLLRKAQADVTPTLIVSL 985

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
            +S G+RI V D+Q+ +  V YK   N+L+ FADDT  RW T + ++DY +VA  DKFGN+
Sbjct: 986  QSQGNRIIVGDLQQGITYVVYKAEGNRLIPFADDTLNRWTTCTTMVDYESVAGGDKFGNI 1045

Query: 192  CIV 194
             IV
Sbjct: 1046 YIV 1048

Involved in pre-mRNA splicing and cell cycle control.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
351712542	1240	Splicing factor 3B subunit 3 [Heteroceph	0.814	0.130	0.587	1e-60
383847297	1217	PREDICTED: splicing factor 3B subunit 3-	0.613	0.100	0.729	8e-51
66553024	1217	PREDICTED: splicing factor 3B subunit 3	0.603	0.098	0.733	1e-50
340721347	1217	PREDICTED: splicing factor 3B subunit 3-	0.603	0.098	0.733	1e-50
91092128	1219	PREDICTED: similar to AGAP005549-PA [Tri	0.623	0.101	0.725	6e-50
322797581	1217	hypothetical protein SINV_00421 [Solenop	0.613	0.100	0.704	1e-49
307205956	1217	Splicing factor 3B subunit 3 [Harpegnath	0.603	0.098	0.716	1e-49
332026090	1217	Splicing factor 3B subunit 3 [Acromyrmex	0.613	0.100	0.704	2e-49
326676028	1217	PREDICTED: splicing factor 3B subunit 3-	0.618	0.101	0.699	7e-49
47087273	1217	splicing factor 3B subunit 3 [Danio reri	0.618	0.101	0.699	8e-49

>gi|351712542|gb|EHB15461.1| Splicing factor 3B subunit 3 [Heterocephalus glaber]

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/194 (58%), Positives = 140/194 (72%), Gaps = 32/194 (16%)

Query: 1    MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
            +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENK            
Sbjct: 918  LEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENK------------ 965

Query: 61   HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCE 120
                                T V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCE
Sbjct: 966  --------------------TPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCE 1005

Query: 121  NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN 180
            NKH+ N I  I+++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+
Sbjct: 1006 NKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYD 1065

Query: 181  TVASADKFGNVCIV 194
            TVA ADKFGN+C+V
Sbjct: 1066 TVAGADKFGNICVV 1079

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383847297|ref|XP_003699291.1| PREDICTED: splicing factor 3B subunit 3-like [Megachile rotundata]

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 89/122 (72%), Positives = 109/122 (89%)

Query: 73   NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
             ++E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN IV I 
Sbjct: 935  TSLELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAIVSIN 994

Query: 133  SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
            ++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ 
Sbjct: 995  AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054

Query: 193  IV 194
            ++
Sbjct: 1055 VI 1056

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66553024|ref|XP_623333.1| PREDICTED: splicing factor 3B subunit 3 isoform 1 [Apis mellifera] gi|380015815|ref|XP_003691890.1| PREDICTED: splicing factor 3B subunit 3-like [Apis florea]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/120 (73%), Positives = 108/120 (90%)

Query: 75   MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
            +E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996

Query: 135  GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
            G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997  GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721347|ref|XP_003399083.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus terrestris] gi|350406701|ref|XP_003487854.1| PREDICTED: splicing factor 3B subunit 3-like [Bombus impatiens]

 Score =  204 bits (519), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 88/120 (73%), Positives = 108/120 (90%)

Query: 75   MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
            +E VHKT++DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937  LELVHKTTLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996

Query: 135  GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
            G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997  GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91092128|ref|XP_972649.1| PREDICTED: similar to AGAP005549-PA [Tribolium castaneum] gi|270004662|gb|EFA01110.1| hypothetical protein TcasGA2_TC010322 [Tribolium castaneum]

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 107/124 (86%)

Query: 71   VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVK 130
            +G  +EFVH+T VDEVP A+C + G LL GVGR LRLYD+GKKKLLRKCENKH+PN IV 
Sbjct: 935  MGRELEFVHRTPVDEVPMALCAYNGLLLAGVGRMLRLYDMGKKKLLRKCENKHIPNAIVN 994

Query: 131  IESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN 190
            I++MG RI+VSDVQESVF+VRYKR ENQL+IFADDT PRW+T +CVLDY+TVA ADKFGN
Sbjct: 995  IQAMGKRIFVSDVQESVFMVRYKRAENQLIIFADDTHPRWVTCNCVLDYDTVAVADKFGN 1054

Query: 191  VCIV 194
            + I+
Sbjct: 1055 IAIL 1058

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322797581|gb|EFZ19622.1| hypothetical protein SINV_00421 [Solenopsis invicta]

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 108/122 (88%)

Query: 73   NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
             ++E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I 
Sbjct: 935  TSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSIN 994

Query: 133  SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
            ++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ 
Sbjct: 995  AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054

Query: 193  IV 194
            ++
Sbjct: 1055 VI 1056

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205956|gb|EFN84082.1| Splicing factor 3B subunit 3 [Harpegnathos saltator]

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 86/120 (71%), Positives = 107/120 (89%)

Query: 75   MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
            +E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I ++
Sbjct: 937  LELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAI 996

Query: 135  GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV 194
            G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ ++
Sbjct: 997  GQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVI 1056

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026090|gb|EGI66238.1| Splicing factor 3B subunit 3 [Acromyrmex echinatior]

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 108/122 (88%)

Query: 73   NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
             ++E +HK+ +DEVP A+CP+QG +LVGVGR LRLYD+GKKKLLRKCENKH+PN +V I 
Sbjct: 935  TSIELLHKSPLDEVPLAICPYQGRVLVGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSIN 994

Query: 133  SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
            ++G RIYVSDVQESV+ VRYKR ENQL++FADDT PRWITT+CVLDY+TVA+ADKFGN+ 
Sbjct: 995  AIGQRIYVSDVQESVYAVRYKRQENQLIVFADDTHPRWITTTCVLDYDTVATADKFGNIA 1054

Query: 193  IV 194
            ++
Sbjct: 1055 VI 1056

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326676028|ref|XP_002667683.2| PREDICTED: splicing factor 3B subunit 3-like [Danio rerio] gi|123888555|sp|Q1LVE8.1|SF3B3_DANRE RecName: Full=Splicing factor 3B subunit 3

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 109/123 (88%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+  I
Sbjct: 934  GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             ++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct: 994  HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47087273|ref|NP_998668.1| splicing factor 3B subunit 3 [Danio rerio] gi|28502779|gb|AAH47171.1| Splicing factor 3b, subunit 3 [Danio rerio]

 Score =  199 bits (505), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 109/123 (88%)

Query: 72   GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
            G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+  I
Sbjct: 934  GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993

Query: 132  ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             ++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct: 994  HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053

Query: 192  CIV 194
            C+V
Sbjct: 1054 CVV 1056

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
ZFIN|ZDB-GENE-040426-2901	1217	sf3b3 "splicing factor 3b, sub	0.618	0.101	0.699	1.9e-45
UNIPROTKB|F1NZF7	504	SF3B3 "Uncharacterized protein	0.618	0.244	0.682	1.5e-44
UNIPROTKB|F1S419	319	LOC100512659 "Uncharacterized	0.618	0.385	0.682	1.9e-44
RGD|1311636	902	Sf3b3 "splicing factor 3b, sub	0.618	0.136	0.682	1.5e-43
UNIPROTKB|E9PT66	920	Sf3b3 "Protein Sf3b3" [Rattus	0.618	0.133	0.682	1.6e-43
UNIPROTKB|A0JN52	1217	SF3B3 "Splicing factor 3B subu	0.618	0.101	0.682	3.3e-43
UNIPROTKB|E2RR33	1217	SF3B3 "Uncharacterized protein	0.618	0.101	0.682	3.3e-43
UNIPROTKB|Q15393	1217	SF3B3 "Splicing factor 3B subu	0.618	0.101	0.682	3.3e-43
MGI|MGI:1289341	1217	Sf3b3 "splicing factor 3b, sub	0.618	0.101	0.682	3.3e-43
FB|FBgn0035162	1227	CG13900 [Drosophila melanogast	0.608	0.098	0.661	9e-43

ZFIN|ZDB-GENE-040426-2901 sf3b3 "splicing factor 3b, subunit 3" [Danio rerio (taxid:7955)]

 Score = 489 (177.2 bits), Expect = 1.9e-45, P = 1.9e-45
 Identities = 86/123 (69%), Positives = 109/123 (88%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G+ +EF+HKT V++VP A+ PFQG +LVGVG+ LR+YDLGKKKLLRKCENKH+PNL+  I
Sbjct:   934 GDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGI 993

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
              ++G R+ VSDVQES+F VRY+R ENQL+IFADDT PRWITT+C+LDY+T+ASADKFGN+
Sbjct:   994 HTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNI 1053

Query:   192 CIV 194
             C+V
Sbjct:  1054 CVV 1056

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

UNIPROTKB|F1NZF7 SF3B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   221 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYICGI 280

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   281 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTATLLDYDTVAGADKFGNI 340

Query:   192 CIV 194
             C+V
Sbjct:   341 CVV 343

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1S419 LOC100512659 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   112 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 171

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   172 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 231

Query:   192 CIV 194
             C+V
Sbjct:   232 CVV 234

GO:0005634 "nucleus" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1311636 Sf3b3 "splicing factor 3b, subunit 3" [Rattus norvegicus (taxid:10116)]

 Score = 468 (169.8 bits), Expect = 1.5e-43, P = 1.5e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   619 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 678

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   679 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 738

Query:   192 CIV 194
             C+V
Sbjct:   739 CVV 741

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005689 "U12-type spliceosomal complex" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

UNIPROTKB|E9PT66 Sf3b3 "Protein Sf3b3" [Rattus norvegicus (taxid:10116)]

 Score = 468 (169.8 bits), Expect = 1.6e-43, P = 1.6e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   637 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 696

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   697 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 756

Query:   192 CIV 194
             C+V
Sbjct:   757 CVV 759

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A0JN52 SF3B3 "Splicing factor 3B subunit 3" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 3.3e-43, P = 3.3e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query:   192 CIV 194
             C+V
Sbjct:  1054 CVV 1056

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0005689 "U12-type spliceosomal complex" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2RR33 SF3B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 468 (169.8 bits), Expect = 3.3e-43, P = 3.3e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query:   192 CIV 194
             C+V
Sbjct:  1054 CVV 1056

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0005689 "U12-type spliceosomal complex" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q15393 SF3B3 "Splicing factor 3B subunit 3" [Homo sapiens (taxid:9606)]

 Score = 468 (169.8 bits), Expect = 3.3e-43, P = 3.3e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query:   192 CIV 194
             C+V
Sbjct:  1054 CVV 1056

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000375 "RNA splicing, via transesterification reactions" evidence=TAS

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0005689 "U12-type spliceosomal complex" evidence=IDA

GO:0030532 "small nuclear ribonucleoprotein complex" evidence=TAS

GO:0005681 "spliceosomal complex" evidence=TAS

GO:0006397 "mRNA processing" evidence=TAS

GO:0006461 "protein complex assembly" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

MGI|MGI:1289341 Sf3b3 "splicing factor 3b, subunit 3" [Mus musculus (taxid:10090)]

 Score = 468 (169.8 bits), Expect = 3.3e-43, P = 3.3e-43
 Identities = 84/123 (68%), Positives = 104/123 (84%)

Query:    72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKI 131
             G  +EF+HKT V+EVP A+ PFQG +L+GVG+ LR+YDLGKKKLLRKCENKH+ N I  I
Sbjct:   934 GEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGI 993

Query:   132 ESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNV 191
             +++GHR+ VSDVQES   VRYKR ENQL+IFADDT PRW+TT+ +LDY+TVA ADKFGN+
Sbjct:   994 QTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNI 1053

Query:   192 CIV 194
             C+V
Sbjct:  1054 CVV 1056

GO:0003674 "molecular_function" evidence=ND

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0005689 "U12-type spliceosomal complex" evidence=ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

FB|FBgn0035162 CG13900 [Drosophila melanogaster (taxid:7227)]

 Score = 464 (168.4 bits), Expect = 9.0e-43, P = 9.0e-43
 Identities = 80/121 (66%), Positives = 103/121 (85%)

Query:    73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE 132
             +++EF+H+T +DE+P A+C FQG LL G GR LR+YD GKKK+LRKCENKH+P  IV I+
Sbjct:   945 SSLEFMHRTDIDEIPGALCGFQGRLLAGCGRMLRIYDFGKKKMLRKCENKHIPYQIVNIQ 1004

Query:   133 SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVC 192
             +MGHR+YVSDVQESVF +RY+R ENQL+IFADDT PRW+T + +LDY+T+A ADKFGN+ 
Sbjct:  1005 AMGHRVYVSDVQESVFFIRYRRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNLS 1064

Query:   193 I 193
             I
Sbjct:  1065 I 1065

GO:0003684 "damaged DNA binding" evidence=ISS

GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS

GO:0005686 "U2 snRNP" evidence=ISS;IDA

GO:0007052 "mitotic spindle organization" evidence=IMP

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q921M3	SF3B3_MOUSE	No assigned EC number	0.6829	0.6130	0.1002	yes	N/A
Q54SA7	SF3B3_DICDI	No assigned EC number	0.5772	0.5829	0.0923	yes	N/A
P0CR22	RSE1_CRYNJ	No assigned EC number	0.5447	0.6130	0.1002	yes	N/A
Q5RBI5	SF3B3_PONAB	No assigned EC number	0.6829	0.6130	0.1002	yes	N/A
Q4WLI5	RSE1_ASPFU	No assigned EC number	0.5121	0.6180	0.1004	yes	N/A
A0JN52	SF3B3_BOVIN	No assigned EC number	0.6829	0.6130	0.1002	yes	N/A
Q15393	SF3B3_HUMAN	No assigned EC number	0.6829	0.6130	0.1002	yes	N/A
Q1LVE8	SF3B3_DANRE	No assigned EC number	0.6991	0.6180	0.1010	yes	N/A
Q5B1X8	RSE1_EMENI	No assigned EC number	0.5203	0.6180	0.1017	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	199
pfam03178	318	pfam03178, CPSF_A, CPSF A subunit region	3e-44
pfam03178	318	pfam03178, CPSF_A, CPSF A subunit region	4e-17

>gnl|CDD|217409 pfam03178, CPSF_A, CPSF A subunit region

 Score =  149 bits (378), Expect = 3e-44
 Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 1/121 (0%)

Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM 134
           ++ VHKT V     A+C FQG LL G G+ LR+YDLGK KLL K         +V ++  
Sbjct: 77  LKLVHKTEVKGAVTALCEFQGRLLAGQGQKLRVYDLGKDKLLPKAFLDTPITYVVSLKVF 136

Query: 135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCI 193
           G+RI V D+ +SV  + Y     +L++FA DTQPRW+T +  L DY+T+  ADKFGN+ +
Sbjct: 137 GNRIIVGDLMKSVTFLGYDEEPYRLILFARDTQPRWVTAAEFLVDYDTILGADKFGNLHV 196

Query: 194 V 194
           +
Sbjct: 197 L 197

This family includes a region that lies towards the C-terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs. The function of the aligned region is unknown but may be involved in RNA/DNA binding. Length = 318

>gnl|CDD|217409 pfam03178, CPSF_A, CPSF A subunit region

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 1   MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
           ++ VHKT V     A+C FQG LL G G+ LR+YDLGK KLL K                
Sbjct: 77  LKLVHKTEVKGAVTALCEFQGRLLAGQGQKLRVYDLGKDKLLPKAFLD---TPITYVVSL 133

Query: 61  HTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPF 93
                R   +VG+ M+ V     DE PY +  F
Sbjct: 134 KVFGNRI--IVGDLMKSVTFLGYDEEPYRLILF 164

This family includes a region that lies towards the C-terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs. The function of the aligned region is unknown but may be involved in RNA/DNA binding. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
KOG1897|consensus	1096		99.97
KOG1898|consensus	1205		99.97
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	99.96
KOG1896|consensus	1366		99.86
KOG1898|consensus	1205		99.85
COG5161	1319	SFT1 Pre-mRNA cleavage and polyadenylation specifi	99.57
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	99.42
KOG1897|consensus	1096		99.32
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	97.39
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	97.11
KOG1036|consensus	323		96.92
KOG1539|consensus	910		96.54
PLN00181	793	protein SPA1-RELATED; Provisional	96.32
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.07
PLN00181	793	protein SPA1-RELATED; Provisional	95.99
KOG2106|consensus	626		95.97
KOG0646|consensus	476		95.89
PRK11028	330	6-phosphogluconolactonase; Provisional	95.85
KOG0291|consensus	893		95.75
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.55
KOG0318|consensus	603		95.46
KOG1896|consensus	1366		95.35
KOG4378|consensus	673		95.15
KOG1408|consensus	1080		94.9
KOG1188|consensus	376		94.64
KOG1539|consensus	910		94.56
KOG0278|consensus	334		94.26
PTZ00420	568	coronin; Provisional	94.2
KOG2111|consensus	346		93.94
KOG0283|consensus	712		93.38
KOG0315|consensus	311		92.88
KOG2106|consensus	626		92.79
PTZ00421	493	coronin; Provisional	92.45
KOG0315|consensus	311		92.35
KOG0296|consensus	399		91.61
KOG2394|consensus	636		90.91
KOG1273|consensus	405		90.79
KOG0268|consensus	433		90.5
KOG0291|consensus	893		90.38
KOG0318|consensus	603		90.31
PRK11028	330	6-phosphogluconolactonase; Provisional	89.08
KOG2048|consensus	691		88.49
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	88.44
KOG0771|consensus	398		87.63
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	87.37
KOG0306|consensus	888		86.68
KOG0279|consensus	315		86.64
KOG3881|consensus	412		86.62
KOG0305|consensus	484		86.54
KOG0273|consensus	524		86.48
KOG0299|consensus	479		86.38
KOG0646|consensus	476		86.2
KOG0306|consensus	888		85.53
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	85.35
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	84.76
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	84.62
KOG0274|consensus	537		84.49
KOG0266|consensus	456		84.36
KOG0650|consensus	733		84.12
KOG2110|consensus	391		83.8
KOG2048|consensus	691		83.78
KOG0647|consensus	347		83.63
KOG0647|consensus	347		83.46
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	83.32
KOG0310|consensus	487		82.17
KOG1036|consensus	323		81.73
KOG0772|consensus	641		81.67
KOG0289|consensus	506		81.48
KOG2055|consensus	514		81.46
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	81.24
KOG0282|consensus	503		80.93
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	80.84
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	80.14

>KOG1897|consensus

Probab=99.97  E-value=2.6e-31  Score=255.13  Aligned_cols=171  Identities=28%  Similarity=0.431  Sum_probs=143.5

Q ss_pred             ceeEEecCCCcceeeccc--------CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE--
Q psy17021          2 EFVHKTSVDEVPYAMCPF--------QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV--   71 (199)
Q Consensus         2 ~~~h~t~~~~~~~~~~~f--------~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v--   71 (199)
                      +.+|-++.++.-.|+.--        +.+++||.|.   +|+       .|.|.+                 .+||.+  
T Consensus       761 ~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~---v~P-------de~ep~-----------------~GRIivfe  813 (1096)
T KOG1897|consen  761 EVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGL---VYP-------DENEPV-----------------NGRIIVFE  813 (1096)
T ss_pred             eEEeeccccccceeeeeeeeeecCCCceEEEEEEEe---ecc-------CCCCcc-----------------cceEEEEE
Confidence            567777777655544333        5568899876   555       222322                 245532  


Q ss_pred             ---CCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEE
Q psy17021         72 ---GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVF  148 (199)
Q Consensus        72 ---gdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~  148 (199)
                         +.+++.+|+++++|+|++++.|+|++|||+|++|++|+|+.++.+++++....|+++.+|++.||+|+|||+|+|++
T Consensus       814 ~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sit  893 (1096)
T KOG1897|consen  814 FEELNSLELVAETVVKGAVYALVEFNGKLLAGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSIT  893 (1096)
T ss_pred             EecCCceeeeeeeeeccceeehhhhCCeEEEecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEE
Confidence               47899999999999999999999999999999999999998854454444448999999999999999999999999


Q ss_pred             EEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021        149 LVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       149 ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      +++|+.++++|+|+|||++|+|+||+|++|+++|+|||++||+|++|+|.+
T Consensus       894 ll~y~~~eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~~  944 (1096)
T KOG1897|consen  894 LLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKDSD  944 (1096)
T ss_pred             EEEEeccCCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEecCC
Confidence            999999999999999999999999999999999999999999999999864

>KOG1898|consensus

Probab=99.97  E-value=1.5e-29  Score=244.08  Aligned_cols=162  Identities=49%  Similarity=0.789  Sum_probs=141.5

Q ss_pred             ccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccccCeE
Q psy17021         18 PFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGAL   97 (199)
Q Consensus        18 ~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f~g~L   97 (199)
                      +.+-.++||++.+.+++..       ++ ..    ++.  .++....      -|+++|++|.+++.|+|.|+|||+|++
T Consensus       889 ~~~~~~~v~~~~~~~l~~~-------~~-~~----g~~--ytyk~~~------~g~~lellh~T~~~~~v~Ai~~f~~~~  948 (1205)
T KOG1898|consen  889 EYQPFVAVGVATTEQLDSK-------SI-SS----GFV--YTYKFVR------NGDKLELLHKTEIPGPVGAICPFQGRV  948 (1205)
T ss_pred             CCceEEEEEeecccccccc-------cc-CC----Cce--EEEEEEe------cCceeeeeeccCCCccceEEeccCCEE
Confidence            3344678888877776652       11 11    111  2222222      378999999999999999999999999


Q ss_pred             EEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE
Q psy17021         98 LVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL  177 (199)
Q Consensus        98 Laavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L  177 (199)
                      |||+|+.+++|++|+|+|+|||+++.++.+|+++++.+.||+|||.++||.+++|++++|+|..+|+|..|||||+++++
T Consensus       949 LagvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~l 1028 (1205)
T KOG1898|consen  949 LAGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELL 1028 (1205)
T ss_pred             EEecccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEe
Confidence            99999999999999999999999997799999999999999999999999999999999999999999999999999999


Q ss_pred             eCCeEEEEcCCCcEEEEeecCC
Q psy17021        178 DYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       178 d~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      |++|++|||++||++++|+|||
T Consensus      1029 D~~tvagaDrfGNi~~vR~P~d 1050 (1205)
T KOG1898|consen 1029 DYDTVAGADRFGNIAVVRIPPD 1050 (1205)
T ss_pred             cCCceeeccccCcEEEEECCCc
Confidence            9999999999999999999986

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=99.96  E-value=4.4e-28  Score=212.09  Aligned_cols=126  Identities=37%  Similarity=0.585  Sum_probs=116.2

Q ss_pred             CeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcc-eeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021         73 NAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK-LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        73 dklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~-Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~  151 (199)
                      .+++.+|.++++|+|+|+++|+|+|+||+|++|++|+|+.++ |+++|+++ .+.+++++.+.+|+|+|||+++|+++++
T Consensus        77 ~~l~~i~~~~~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~-~~~~i~sl~~~~~~I~vgD~~~sv~~~~  155 (321)
T PF03178_consen   77 FKLKLIHSTEVKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYD-SPFYITSLSVFKNYILVGDAMKSVSLLR  155 (321)
T ss_dssp             -EEEEEEEEEESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE--BSSSEEEEEEETTEEEEEESSSSEEEEE
T ss_pred             eEEEEEEEEeecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheec-ceEEEEEEeccccEEEEEEcccCEEEEE
Confidence            389999999999999999999999999999999999999888 99999997 7889999999999999999999999999


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeecCC
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      |+++.++|.++|||+.++|++|+++| |+++++++|++||++++++||+
T Consensus       156 ~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~  204 (321)
T PF03178_consen  156 YDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPE  204 (321)
T ss_dssp             EETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS
T ss_pred             EEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCC
Confidence            99988889999999999999999999 8889999999999999999974

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1896|consensus

Probab=99.86  E-value=2.9e-21  Score=188.98  Aligned_cols=128  Identities=17%  Similarity=0.222  Sum_probs=121.0

Q ss_pred             ECCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEc-CCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEE
Q psy17021         71 VGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDL-GKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL  149 (199)
Q Consensus        71 vgdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l-~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~l  149 (199)
                      ...|++-+...+.+|+|.++|.++|+|+.+.|+|+++|+| .+..|...++++ +|.|++++++.+|+|++||+|+|++|
T Consensus      1084 t~~KlKel~~eE~KGtVsavceV~G~l~~~~GqKI~v~~l~r~~~ligVaFiD-~~~yv~s~~~vknlIl~gDV~ksisf 1162 (1366)
T KOG1896|consen 1084 TKNKLKELYIEEQKGTVSAVCEVRGHLLSSQGQKIIVRKLDRDSELIGVAFID-LPLYVHSMKVVKNLILAGDVMKSISF 1162 (1366)
T ss_pred             ccceeeeeehhhcccceEEEEEeccEEEEccCcEEEEEEeccCCcceeeEEec-cceeEEehhhhhhheehhhhhhceEE
Confidence            3568999999999999999999999999999999999999 566799999985 99999999999999999999999999


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEEeCC---eEEEEcCCCcEEEEeecCC
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVLDYN---TVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~Ld~~---t~l~aD~~gNl~vlr~~~~  199 (199)
                      ++|+++..+|..++||..++.++|+|||-++   .++++|.++||.++.+.||
T Consensus      1163 l~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~Pe 1215 (1366)
T KOG1896|consen 1163 LGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAPE 1215 (1366)
T ss_pred             EEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCCC
Confidence            9999999999999999999999999999554   6999999999999999986

>KOG1898|consensus

Probab=99.85  E-value=1.5e-21  Score=189.18  Aligned_cols=91  Identities=43%  Similarity=0.675  Sum_probs=85.0

Q ss_pred             CceeEEecCCCcceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe
Q psy17021          1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK   80 (199)
Q Consensus         1 l~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~   80 (199)
                      |||+|+|+++.+|+|||+|+||+|+|+|+.||+||+||||||||||++. +|.    .++.++|+++||+|||.++|+|+
T Consensus       926 lellh~T~~~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~lLRk~e~k~-~p~----~Is~iqt~~~RI~VgD~qeSV~~ 1000 (1205)
T KOG1898|consen  926 LELLHKTEIPGPVGAICPFQGRVLAGVGRFLRLYDLGKKKLLRKCELKF-IPN----RISSIQTYGARIVVGDIQESVHF 1000 (1205)
T ss_pred             eeeeeccCCCccceEEeccCCEEEEecccEEEEeeCChHHHHhhhhhcc-Cce----EEEEEeecceEEEEeeccceEEE
Confidence            6899999999999999999999999999999999999999999999994 666    55889999999999999999999


Q ss_pred             eccCCcceEEccccCe
Q psy17021         81 TSVDEVPYAMCPFQGA   96 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~   96 (199)
                      ..|+..-+.+.+|.|+
T Consensus      1001 ~~y~~~~n~l~~fadD 1016 (1205)
T KOG1898|consen 1001 VRYRREDNQLIVFADD 1016 (1205)
T ss_pred             EEEecCCCeEEEEeCC
Confidence            9999988888888774

>COG5161 SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]

Probab=99.57  E-value=6e-15  Score=141.75  Aligned_cols=127  Identities=9%  Similarity=0.152  Sum_probs=120.2

Q ss_pred             CCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcc-eeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEE
Q psy17021         72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK-LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLV  150 (199)
Q Consensus        72 gdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~-Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll  150 (199)
                      ..|++.+...+.+|.|-.+|.+.|+++.+.|+||.++++.+.. ++..++++ .+.++.++++.+|++++||+|++++|+
T Consensus      1039 ~~KLK~~~~Ee~kGTV~~vcEV~G~~~~~qgqKV~Vr~i~~~~~iipV~F~D-l~~ft~s~k~~~Nlll~gD~~qg~~F~ 1117 (1319)
T COG5161        1039 DCKLKVLGIEETKGTVVRVCEVRGKIALCQGQKVMVRKIDRSSGIIPVGFYD-LHIFTSSIKVVKNLLLAGDIYQGLSFF 1117 (1319)
T ss_pred             cceeeEEehhhcccEEEEEEEEccEEEeccCcEEEEEEecccCCcceeEEEe-eeeeeehhhhhhheeehhhhhcCcEEE
Confidence            5689999999999999999999999999999999999998654 89999996 899999999999999999999999999


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeCC---eEEEEcCCCcEEEEeecCC
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDYN---TVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~---t~l~aD~~gNl~vlr~~~~  199 (199)
                      .|++++.++..+++.-..+.++|.|||...   .++++|..||+.++.++||
T Consensus      1118 gF~~ePyRm~l~s~s~~~~n~~s~efLv~G~~lyf~~~Da~gnih~l~Y~P~ 1169 (1319)
T COG5161        1118 GFQSEPYRMHLISSSEPLRNATSTEFLVTGNELYFLCCDAKGNIHGLTYSPN 1169 (1319)
T ss_pred             EecCCcEEEEEecCCchhhcchhhHhhccCCeeEEEEEcCCCCEEEEecCCC
Confidence            999999999999999999999999999554   7999999999999999886

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=99.42  E-value=7.7e-12  Score=109.49  Aligned_cols=163  Identities=24%  Similarity=0.350  Sum_probs=118.0

Q ss_pred             CceeEEecCCCcceeecccCCEEEEeecCeeEEEecchhh-hhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEE
Q psy17021          1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKK-LLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH   79 (199)
Q Consensus         1 l~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k~-ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh   79 (199)
                      |+++|+++++++|+|+++|+|+|++|+|+.|.+|+++.++ |+++|+..  .|.+   ++++... +++|++||..++++
T Consensus        79 l~~i~~~~~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~--~~~~---i~sl~~~-~~~I~vgD~~~sv~  152 (321)
T PF03178_consen   79 LKLIHSTEVKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYD--SPFY---ITSLSVF-KNYILVGDAMKSVS  152 (321)
T ss_dssp             EEEEEEEEESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE---BSSS---EEEEEEE-TTEEEEEESSSSEE
T ss_pred             EEEEEEEeecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheec--ceEE---EEEEecc-ccEEEEEEcccCEE
Confidence            5789999999999999999999999999999999999999 99999998  3333   4555555 58999999999998


Q ss_pred             eeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCC-
Q psy17021         80 KTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYE-  156 (199)
Q Consensus        80 ~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~-  156 (199)
                      ...|+..                         .++|...|... .+..++++...  ++.+++||...++.+++|+++. 
T Consensus       153 ~~~~~~~-------------------------~~~l~~va~d~-~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~  206 (321)
T PF03178_consen  153 LLRYDEE-------------------------NNKLILVARDY-QPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIP  206 (321)
T ss_dssp             EEEEETT-------------------------TE-EEEEEEES-S-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-S
T ss_pred             EEEEEcc-------------------------CCEEEEEEecC-CCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCc
Confidence            8766552                         22233333322 35567777665  4599999999999999998642 


Q ss_pred             -----C-eEEEEeccCCceeEEEE---EEEe----CC-----eEEEEcCCCcEEEEe
Q psy17021        157 -----N-QLLIFADDTQPRWITTS---CVLD----YN-----TVASADKFGNVCIVS  195 (199)
Q Consensus       157 -----~-~l~~varD~~~~wvta~---~~Ld----~~-----t~l~aD~~gNl~vlr  195 (199)
                           . +|..++.=+..--+++.   .+..    .+     .++.+=.+|.|.++.
T Consensus       207 ~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l~  263 (321)
T PF03178_consen  207 NSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVLI  263 (321)
T ss_dssp             STTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEEE
T ss_pred             ccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEEE
Confidence                 3 78888887778788888   3333    12     288888999998553

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1897|consensus

Probab=99.32  E-value=8.6e-12  Score=121.52  Aligned_cols=124  Identities=21%  Similarity=0.226  Sum_probs=91.9

Q ss_pred             CceeEEecCCCcceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe
Q psy17021          1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK   80 (199)
Q Consensus         1 l~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~   80 (199)
                      ||++|+|.+++.|+||+.|+||||||+|..+|||+++++|.||++.+.. .|.   .++.+. ..+++|+|||.++|+|.
T Consensus       820 L~~v~e~~v~Gav~aL~~fngkllA~In~~vrLye~t~~~eLr~e~~~~-~~~---~aL~l~-v~gdeI~VgDlm~Sitl  894 (1096)
T KOG1897|consen  820 LELVAETVVKGAVYALVEFNGKLLAGINQSVRLYEWTTERELRIECNIS-NPI---IALDLQ-VKGDEIAVGDLMRSITL  894 (1096)
T ss_pred             eeeeeeeeeccceeehhhhCCeEEEecCcEEEEEEccccceehhhhccc-CCe---EEEEEE-ecCcEEEEeeccceEEE
Confidence            6899999999999999999999999999999999999999999999883 333   244444 45699999999999999


Q ss_pred             eccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCC
Q psy17021         81 TSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      ..|++.-..+..++.+                         . .|.+.+.... .++.++.+|-.=-+.+++++.+
T Consensus       895 l~y~~~eg~f~evArD-------------------------~-~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~~  944 (1096)
T KOG1897|consen  895 LQYKGDEGNFEEVARD-------------------------Y-NPNWMTAVEILDDDTYLGAENSGNLFTVRKDSD  944 (1096)
T ss_pred             EEEeccCCceEEeehh-------------------------h-CccceeeEEEecCceEEeecccccEEEEEecCC
Confidence            9888765554443322                         2 2333333332 2445566666666667776543

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=97.39  E-value=0.041  Score=43.63  Aligned_cols=171  Identities=12%  Similarity=0.114  Sum_probs=91.3

Q ss_pred             ecccCCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee-EECC-----------eeeEEEee-
Q psy17021         16 MCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR-LVGN-----------AMEFVHKT-   81 (199)
Q Consensus        16 ~~~f~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri-~vgd-----------klesVh~~-   81 (199)
                      ..+....++++. .+.+++||+...+.+++-...   +..+   .......++++ +++.           ..+.+... 
T Consensus        59 ~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~---~~~i---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  132 (289)
T cd00200          59 ASADGTYLASGSSDKTIRLWDLETGECVRTLTGH---TSYV---SSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLR  132 (289)
T ss_pred             ECCCCCEEEEEcCCCeEEEEEcCcccceEEEecc---CCcE---EEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEec
Confidence            344444666655 589999999876554432211   1111   11111111122 2221           11222222 


Q ss_pred             ccCCcceEEcccc-CeEE-EEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCC
Q psy17021         82 SVDEVPYAMCPFQ-GALL-VGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        82 ~~kG~v~aL~~f~-g~LL-aav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ..+++++++..-. +.++ ++- ++.+++|++...+.......  ....+.++...  ++.+++|..-..+.++..+  .
T Consensus       133 ~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~--~  208 (289)
T cd00200         133 GHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--T  208 (289)
T ss_pred             cCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec--CccccceEEECCCcCEEEEecCCCcEEEEECC--C
Confidence            2445677766554 4554 444 78999999976554333222  12245555544  4488888886677766553  2


Q ss_pred             CeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEeec
Q psy17021        157 NQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~~  197 (199)
                      .+....-. ..+.+++++.+-+++ .+++++.++.+.++...
T Consensus       209 ~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~  249 (289)
T cd00200         209 GKCLGTLR-GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR  249 (289)
T ss_pred             Cceecchh-hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcC
Confidence            32222221 223478888887545 56666669999988754

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=97.11  E-value=0.095  Score=41.51  Aligned_cols=170  Identities=13%  Similarity=0.146  Sum_probs=90.1

Q ss_pred             ccCCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeE-----------EE-eeccC
Q psy17021         18 PFQGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEF-----------VH-KTSVD   84 (199)
Q Consensus        18 ~f~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkles-----------Vh-~~~~k   84 (199)
                      +-+..|++|. .+.+++|++...+.++......   ..++ -+.... .++.++++..-..           +. ....+
T Consensus        19 ~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~---~~i~-~~~~~~-~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~   93 (289)
T cd00200          19 PDGKLLATGSGDGTIKVWDLETGELLRTLKGHT---GPVR-DVAASA-DGTYLASGSSDKTIRLWDLETGECVRTLTGHT   93 (289)
T ss_pred             CCCCEEEEeecCcEEEEEEeeCCCcEEEEecCC---ccee-EEEECC-CCCEEEEEcCCCeEEEEEcCcccceEEEeccC
Confidence            3345666666 4889999997765443322210   1110 111111 1124444321111           11 12233


Q ss_pred             CcceEEcccc-CeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         85 EVPYAMCPFQ-GALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        85 G~v~aL~~f~-g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      +.+.++.... +.++++.  ++.+.+|++...+.......  ....+.++...  +.++++|+.-..+.++..+  .++.
T Consensus        94 ~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~--~~~~  169 (289)
T cd00200          94 SYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRG--HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR--TGKC  169 (289)
T ss_pred             CcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEecc--CCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcc--cccc
Confidence            4666666554 3555444  68999999985554333221  22245555543  5678888756677666553  2222


Q ss_pred             EEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEeec
Q psy17021        160 LIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVSTY  197 (199)
Q Consensus       160 ~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~~  197 (199)
                      ...-. .....++++.+..++ .++.+..++.+.++...
T Consensus       170 ~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~  207 (289)
T cd00200         170 VATLT-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS  207 (289)
T ss_pred             ceeEe-cCccccceEEECCCcCEEEEecCCCcEEEEECC
Confidence            22212 233467888887554 67777779999888653

>KOG1036|consensus

Probab=96.92  E-value=0.067  Score=47.43  Aligned_cols=161  Identities=17%  Similarity=0.187  Sum_probs=96.8

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEE-----------eeccCCcc
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH-----------KTSVDEVP   87 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh-----------~~~~kG~v   87 (199)
                      .+.|||+.= +.||+||.+.-.|+-|-...  .|     +..-.-....-+++|..--.|-           .-.-++++
T Consensus        25 ~~~LLvssWDgslrlYdv~~~~l~~~~~~~--~p-----lL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i   97 (323)
T KOG1036|consen   25 SSDLLVSSWDGSLRLYDVPANSLKLKFKHG--AP-----LLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGI   97 (323)
T ss_pred             CCcEEEEeccCcEEEEeccchhhhhheecC--Cc-----eeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCce
Confidence            388888865 89999999988776665554  22     2222222223444443222222           22345677


Q ss_pred             eEEccc--cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCC--eEEEE
Q psy17021         88 YAMCPF--QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYEN--QLLIF  162 (199)
Q Consensus        88 ~aL~~f--~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~--~l~~v  162 (199)
                      .+++-.  .|.+++|- ++++.+|+--.+....  .+ +.+.-|-++++.+|+++||-.-+.|..+.-.....  |..+-
T Consensus        98 ~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~--~~-d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS  174 (323)
T KOG1036|consen   98 RCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG--TF-DQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRES  174 (323)
T ss_pred             EEEEeeccCCeEEEcccCccEEEEecccccccc--cc-ccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccc
Confidence            777665  67788776 8999999997644322  22 24456888899999999999999998886643222  22222


Q ss_pred             eccCCceeEEEEEEE-eCCeEEEEcCCCcEEE
Q psy17021        163 ADDTQPRWITTSCVL-DYNTVASADKFGNVCI  193 (199)
Q Consensus       163 arD~~~~wvta~~~L-d~~t~l~aD~~gNl~v  193 (199)
                      .=-|+.|   |+.++ ..+.|+++--+|-+.|
T Consensus       175 ~lkyqtR---~v~~~pn~eGy~~sSieGRVav  203 (323)
T KOG1036|consen  175 SLKYQTR---CVALVPNGEGYVVSSIEGRVAV  203 (323)
T ss_pred             cceeEEE---EEEEecCCCceEEEeecceEEE
Confidence            2223333   33333 3456777766666554

>KOG1539|consensus

Probab=96.54  E-value=0.57  Score=46.56  Aligned_cols=191  Identities=16%  Similarity=0.143  Sum_probs=122.9

Q ss_pred             CceeEEe-cCCCcceeecccCCEEEEeecCeeEEEecchh--hhhhhhhhcc-cccCceeeeeEEEEEcCceeEECCeee
Q psy17021          1 MEFVHKT-SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKK--KLLRKCENKV-RIKGFRKAHQTHTHSGRSDRLVGNAME   76 (199)
Q Consensus         1 l~~~h~t-~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k--~ll~k~~~~~-~~~~~~~~~~~~~~~~~~ri~vgdkle   76 (199)
                      |.++|.. +..+-..|++.+++.+.|+.|+.+-.|-.||-  ...++-+.++ ++.+|-+.++.....  +-+++.+.-.
T Consensus        66 l~ll~vs~~lp~~I~alas~~~~vy~A~g~~i~~~~rgk~i~~~~~~~~a~v~~l~~fGe~lia~d~~--~~l~vw~~s~  143 (910)
T KOG1539|consen   66 LNLLFVSKPLPDKITALASDKDYVYVASGNKIYAYARGKHIRHTTLLHGAKVHLLLPFGEHLIAVDIS--NILFVWKTSS  143 (910)
T ss_pred             eEEEEecCCCCCceEEEEecCceEEEecCcEEEEEEccceEEEEeccccceEEEEeeecceEEEEEcc--CcEEEEEecc
Confidence            3566776 78889999999999999999999999999962  2222222111 122333333332222  1223322111


Q ss_pred             -------EEEeeccCCc-ceEEcc---ccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEe
Q psy17021         77 -------FVHKTSVDEV-PYAMCP---FQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSD  142 (199)
Q Consensus        77 -------sVh~~~~kG~-v~aL~~---f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD  142 (199)
                             .+.+.+..+. ++|++.   +-+++++|. ...+.+|.+..++++  +.+..+...|+++...  =|.++||=
T Consensus       144 ~~~e~~l~~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v--~~f~~~~s~IT~ieqsPaLDVVaiG~  221 (910)
T KOG1539|consen  144 IQEELYLQSTFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVV--YTFQEFFSRITAIEQSPALDVVAIGL  221 (910)
T ss_pred             ccccccccceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccCcEE--EEecccccceeEeccCCcceEEEEec
Confidence                   1233444444 667653   457888765 789999999888763  4454455668877753  48888988


Q ss_pred             ccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeecC
Q psy17021        143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTYR  198 (199)
Q Consensus       143 ~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~~  198 (199)
                      .-=-|.++..+. ...+..+--|  .--||++.|=++.  .+..|+.+|.+.++-++.
T Consensus       222 ~~G~ViifNlK~-dkil~sFk~d--~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~  276 (910)
T KOG1539|consen  222 ENGTVIIFNLKF-DKILMSFKQD--WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEK  276 (910)
T ss_pred             cCceEEEEEccc-CcEEEEEEcc--ccceeEEEeccCCCeeEEeccCCceEEEEEcCC
Confidence            877888876653 4456666555  4568999998665  577788889888876653

>PLN00181 protein SPA1-RELATED; Provisional

Probab=96.32  E-value=0.71  Score=45.48  Aligned_cols=115  Identities=17%  Similarity=0.157  Sum_probs=67.2

Q ss_pred             ccCCcceEEccccCeEE-EE-eCCEEEEEEcCCc------ceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEe
Q psy17021         82 SVDEVPYAMCPFQGALL-VG-VGRYLRLYDLGKK------KLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        82 ~~kG~v~aL~~f~g~LL-aa-vg~~v~vy~l~~~------~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~  153 (199)
                      ...+++.++.-.++..+ +| -.++|++|++...      +.+....-.......+.....+++|++|.--..+.++...
T Consensus       659 ~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~  738 (793)
T PLN00181        659 GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKA  738 (793)
T ss_pred             CCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECC
Confidence            34456777665556444 33 3689999999632      2222111101112244455568899999988888887643


Q ss_pred             CCCCeE----------EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        154 RYENQL----------LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       154 ~~~~~l----------~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ......          ....-+....++.++.+= +...++.+..+|+|.++.+
T Consensus       739 ~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        739 FPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            221111          011113344578888886 4448999999999999864

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.07  E-value=0.73  Score=38.80  Aligned_cols=72  Identities=22%  Similarity=0.349  Sum_probs=47.0

Q ss_pred             CcceEEc---cccC--eEEEEeCCEEEEEEcCCc-----ceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021         85 EVPYAMC---PFQG--ALLVGVGRYLRLYDLGKK-----KLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        85 G~v~aL~---~f~g--~LLaavg~~v~vy~l~~~-----~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ..|..++   ...+  +|++|+.+++.+|+|...     +..+  ++. .+..+.++.-.++.|+||- .+...++..  
T Consensus        91 ~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~k--e~~-lp~~~~~i~~~~~~i~v~~-~~~f~~idl--  164 (275)
T PF00780_consen   91 KGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLK--EIS-LPDPPSSIAFLGNKICVGT-SKGFYLIDL--  164 (275)
T ss_pred             CCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeE--EEE-cCCCcEEEEEeCCEEEEEe-CCceEEEec--
Confidence            3455666   4444  588999999999999753     2333  343 5566888888899999997 444555544  


Q ss_pred             CCCeEEEE
Q psy17021        155 YENQLLIF  162 (199)
Q Consensus       155 ~~~~l~~v  162 (199)
                      +.+...++
T Consensus       165 ~~~~~~~l  172 (275)
T PF00780_consen  165 NTGSPSEL  172 (275)
T ss_pred             CCCCceEE
Confidence            34444444

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PLN00181 protein SPA1-RELATED; Provisional

Probab=95.99  E-value=0.79  Score=45.16  Aligned_cols=108  Identities=9%  Similarity=0.127  Sum_probs=66.7

Q ss_pred             CCcceEEcc--ccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021         84 DEVPYAMCP--FQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        84 kG~v~aL~~--f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      .++|+++.-  -+|.+|++.  .++|++|++...+.+..-..   ...+.++..   .++.+++|..-.++.++......
T Consensus       575 ~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~---~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        575 EKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK  651 (793)
T ss_pred             CCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec---CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence            344555443  345555444  57899999976654332222   223444443   47899999888888777654322


Q ss_pred             CeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        157 NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ..+..+.  .....++++.+.|.+.++.+..++.+.++.+
T Consensus       652 ~~~~~~~--~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~  689 (793)
T PLN00181        652 LPLCTMI--GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDL  689 (793)
T ss_pred             ccceEec--CCCCCEEEEEEeCCCEEEEEECCCEEEEEeC
Confidence            2222222  2345788899988888889988888887754

>KOG2106|consensus

Probab=95.97  E-value=0.53  Score=44.58  Aligned_cols=175  Identities=19%  Similarity=0.270  Sum_probs=102.9

Q ss_pred             CCcceeecccCCEEEEeec--CeeEEEecchhhhhhh-hhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCC-
Q psy17021         10 DEVPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRK-CENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDE-   85 (199)
Q Consensus        10 ~~~~~~~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k-~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG-   85 (199)
                      +.-+++||.-++--|+.=|  +.+.+||    ++.|| .+++  +|.-.-.+=+... ++..|++|-....+-+=.++. 
T Consensus       287 ~ggv~~L~~lr~GtllSGgKDRki~~Wd----~~y~k~r~~e--lPe~~G~iRtv~e-~~~di~vGTtrN~iL~Gt~~~~  359 (626)
T KOG2106|consen  287 DGGVFSLCMLRDGTLLSGGKDRKIILWD----DNYRKLRETE--LPEQFGPIRTVAE-GKGDILVGTTRNFILQGTLENG  359 (626)
T ss_pred             CCceEEEEEecCccEeecCccceEEecc----cccccccccc--CchhcCCeeEEec-CCCcEEEeeccceEEEeeecCC
Confidence            3456677766544444422  6799999    44443 2333  5554332333333 445588875544443333332 


Q ss_pred             ------------cceEEccccCeEE-EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEE
Q psy17021         86 ------------VPYAMCPFQGALL-VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        86 ------------~v~aL~~f~g~LL-aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y  152 (199)
                                  --.|..|..+.++ +|..+.|++|+  ++++.=--.+. -+.-....+..| .+++|-.- +-++ -.
T Consensus       360 f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~-d~~~~~~fhpsg-~va~Gt~~-G~w~-V~  433 (626)
T KOG2106|consen  360 FTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIE-DPAECADFHPSG-VVAVGTAT-GRWF-VL  433 (626)
T ss_pred             ceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEec-CceeEeeccCcc-eEEEeecc-ceEE-EE
Confidence                        2346677777655 77889999999  44432211121 123344444556 66676543 3333 34


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeecCC
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      +.+...++.+-.|..|.  +++.+- |.+++.++-.++.|++||+++.
T Consensus       434 d~e~~~lv~~~~d~~~l--s~v~ysp~G~~lAvgs~d~~iyiy~Vs~~  479 (626)
T KOG2106|consen  434 DTETQDLVTIHTDNEQL--SVVRYSPDGAFLAVGSHDNHIYIYRVSAN  479 (626)
T ss_pred             ecccceeEEEEecCCce--EEEEEcCCCCEEEEecCCCeEEEEEECCC
Confidence            66778888888885554  455554 6678999999999999998863

>KOG0646|consensus

Probab=95.89  E-value=0.78  Score=42.78  Aligned_cols=182  Identities=17%  Similarity=0.174  Sum_probs=101.2

Q ss_pred             ecCCCcceeecccCC--EEEEe-ecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCc-eeEECCe--eeEE--
Q psy17021          7 TSVDEVPYAMCPFQG--ALLVG-VGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRS-DRLVGNA--MEFV--   78 (199)
Q Consensus         7 t~~~~~~~~~~~f~~--~ll~~-~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~-ri~vgdk--lesV--   78 (199)
                      --+.++..|+.+++.  .|++| +-.+|-+|.|.--.||.+- .+ |. ..||   .+.-.+++ -|+.|-+  .-.+  
T Consensus        78 ~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~-~a-HY-Q~IT---cL~fs~dgs~iiTgskDg~V~vW~  151 (476)
T KOG0646|consen   78 IVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVL-SA-HY-QSIT---CLKFSDDGSHIITGSKDGAVLVWL  151 (476)
T ss_pred             cccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHH-Hh-hc-ccee---EEEEeCCCcEEEecCCCccEEEEE
Confidence            345567888888865  46777 7899999999999999854 22 12 2233   33222222 2222211  0000  


Q ss_pred             --------------EeeccCC---cceEEc----cccCeEE-EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC
Q psy17021         79 --------------HKTSVDE---VPYAMC----PFQGALL-VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH  136 (199)
Q Consensus        79 --------------h~~~~kG---~v~aL~----~f~g~LL-aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~  136 (199)
                                    -...+.+   +++.|.    +.+.+|+ |+..+++++|++....|+....+. .+...+-++--+-
T Consensus       152 l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp-~si~av~lDpae~  230 (476)
T KOG0646|consen  152 LTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP-SSIKAVALDPAER  230 (476)
T ss_pred             EEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC-CcceeEEEccccc
Confidence                          0111122   222221    1234565 556789999999888888777664 3333444444455


Q ss_pred             EEEEEeccccEEEEEEe---------------CCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021        137 RIYVSDVQESVFLVRYK---------------RYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS  195 (199)
Q Consensus       137 ~IlVGD~~~Sv~ll~y~---------------~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr  195 (199)
                      +++||----.++..-|-               ++.-++-.+--.-+..-+||.+.= |....+.+|.+|++.+..
T Consensus       231 ~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd  305 (476)
T KOG0646|consen  231 VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD  305 (476)
T ss_pred             EEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence            66666554444443331               222233333333333467776665 667899999999998864

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=95.85  E-value=1.1  Score=38.89  Aligned_cols=103  Identities=7%  Similarity=-0.024  Sum_probs=59.1

Q ss_pred             eEEEEe--CCEEEEEEcCC--cceeeeeeccC------cCceEEE--EEEeCCEEEEEec-cccEEEEEEeCCCCeEEEE
Q psy17021         96 ALLVGV--GRYLRLYDLGK--KKLLRKCENKH------LPNLIVK--IESMGHRIYVSDV-QESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        96 ~LLaav--g~~v~vy~l~~--~~Ll~~~~~~~------~~~~i~~--l~~~~~~IlVGD~-~~Sv~ll~y~~~~~~l~~v  162 (199)
                      ++.++-  .++|.+|++..  .++........      .+.+...  ++..+.+++|++- .++++++.++++...+..+
T Consensus       188 ~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~  267 (330)
T PRK11028        188 YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE  267 (330)
T ss_pred             EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe
Confidence            454443  68999999963  23311111110      1223323  3345779999986 5799999998766655555


Q ss_pred             eccCCceeEEEEEEE-eCCeEEEEcC-CCcEEEEeecC
Q psy17021        163 ADDTQPRWITTSCVL-DYNTVASADK-FGNVCIVSTYR  198 (199)
Q Consensus       163 arD~~~~wvta~~~L-d~~t~l~aD~-~gNl~vlr~~~  198 (199)
                      +.-....+..++.+- |...++++.. ++.+.++++++
T Consensus       268 ~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        268 GHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             EEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            543222233344443 4445555554 78899998764

>KOG0291|consensus

Probab=95.75  E-value=1.8  Score=42.83  Aligned_cols=182  Identities=15%  Similarity=0.115  Sum_probs=110.2

Q ss_pred             eeecccCCEEEEeecCeeEEEecchhh-hhhhhhhcc---cccCceeeeeEEEEEcCce-eEECCe-eeEEEeeccCCcc
Q psy17021         14 YAMCPFQGALLVGVGRYLRLYDLGKKK-LLRKCENKV---RIKGFRKAHQTHTHSGRSD-RLVGNA-MEFVHKTSVDEVP   87 (199)
Q Consensus        14 ~~~~~f~~~ll~~~~~~l~~y~~g~k~-ll~k~~~~~---~~~~~~~~~~~~~~~~~~r-i~vgdk-lesVh~~~~kG~v   87 (199)
                      .++.+-..-++-++||.+-+|||-+-+ -=.-+|++-   ++.-++..-.-+....++| +++.-. .--+|.+.++++|
T Consensus        20 l~ft~dG~sviSPvGNrvsv~dLknN~S~Tl~~e~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk~~v   99 (893)
T KOG0291|consen   20 LVFTKDGNSVISPVGNRVSVFDLKNNKSYTLPLETRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFKRGV   99 (893)
T ss_pred             EEECCCCCEEEeccCCEEEEEEccCCcceeEEeecCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEeecCcc
Confidence            344555566999999999999985511 001122221   0111221111112221122 466544 3467889999999


Q ss_pred             eEEcccc-C-eEEEEeCCEEEEEEcCCcc------eeeeeeccCcCc-eEEEEEEe-C-CEEEEEeccccEEEEEEeCCC
Q psy17021         88 YAMCPFQ-G-ALLVGVGRYLRLYDLGKKK------LLRKCENKHLPN-LIVKIESM-G-HRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        88 ~aL~~f~-g-~LLaavg~~v~vy~l~~~~------Ll~~~~~~~~~~-~i~~l~~~-~-~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      .|++-=. | .+.+|.|+-+.+|...+..      ......+. .+. -+++|+=. + +++++|-=--|+.++..+..+
T Consensus       100 ~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~-g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k  178 (893)
T KOG0291|consen  100 GAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYL-GHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNK  178 (893)
T ss_pred             ceEEECCCCcEEEEEecceeEEEecCcchhcccCcceEeeeec-CCccceeEEEeccCCceEEeccccceEEEEEecccc
Confidence            9987443 4 5678999999999996531      11122232 222 38888854 3 366666655688888877766


Q ss_pred             CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        157 NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      + |..-+-.-+.-.|.++.|- |..++..--++|-+++..++
T Consensus       179 ~-~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~  219 (893)
T KOG0291|consen  179 N-LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCD  219 (893)
T ss_pred             c-cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEec
Confidence            6 5555555556677777777 55577777788888888775

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.55  E-value=0.32  Score=41.21  Aligned_cols=138  Identities=25%  Similarity=0.305  Sum_probs=77.1

Q ss_pred             EecCCCcceeecccC-CEEEE-eecCeeEEEecc--hhhhhhh------------hhh---------cc--cccCceeee
Q psy17021          6 KTSVDEVPYAMCPFQ-GALLV-GVGRYLRLYDLG--KKKLLRK------------CEN---------KV--RIKGFRKAH   58 (199)
Q Consensus         6 ~t~~~~~~~~~~~f~-~~ll~-~~~~~l~~y~~g--~k~ll~k------------~~~---------~~--~~~~~~~~~   58 (199)
                      .++++.-|.+++.=. +.|++ .-|..+..|++.  ..+++-.            |+.         |.  .-+.|...-
T Consensus        13 v~~~~~EP~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y   92 (215)
T PF14761_consen   13 VVPCEQEPTAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY   92 (215)
T ss_pred             eeccccCcceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence            466777788888877 99966 566889999987  3232211            000         00  000011111


Q ss_pred             eEEEEE--cCcee---EEC----------Ce-eeEEEeeccCCcceEE--ccccCeEEEEeCCEEEEEEcCCcce-eeee
Q psy17021         59 QTHTHS--GRSDR---LVG----------NA-MEFVHKTSVDEVPYAM--CPFQGALLVGVGRYLRLYDLGKKKL-LRKC  119 (199)
Q Consensus        59 ~~~~~~--~~~ri---~vg----------dk-lesVh~~~~kG~v~aL--~~f~g~LLaavg~~v~vy~l~~~~L-l~~~  119 (199)
                      ++|-..  +++|+   .+|          -+ +-.+.+.+.+.+|.++  ||+.|+||+|.++++.+|.+..... ..+.
T Consensus        93 ~NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~~~~~~~~  172 (215)
T PF14761_consen   93 FNWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQTIQSEKF  172 (215)
T ss_pred             EEhhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEEEEecccc
Confidence            111111  11222   335          12 3346677787776664  7889999999999999999964432 1111


Q ss_pred             eccCc---------CceEEEEEEeCCEEEEEec
Q psy17021        120 ENKHL---------PNLIVKIESMGHRIYVSDV  143 (199)
Q Consensus       120 ~~~~~---------~~~i~~l~~~~~~IlVGD~  143 (199)
                      ++-|+         ...+..+.-.+++|++-+-
T Consensus       173 ~~lDFe~~l~~~~~~~~p~~v~ic~~yiA~~s~  205 (215)
T PF14761_consen  173 SFLDFERSLIDHIDNFKPTQVAICEGYIAVMSD  205 (215)
T ss_pred             cEEechhhhhheecCceEEEEEEEeeEEEEecC
Confidence            11111         2236667777888876443

>KOG0318|consensus

Probab=95.46  E-value=2.3  Score=40.58  Aligned_cols=178  Identities=15%  Similarity=0.156  Sum_probs=113.5

Q ss_pred             ecCCCcceeecccCC--EEEEeecCeeEEEe-cchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEE-----
Q psy17021          7 TSVDEVPYAMCPFQG--ALLVGVGRYLRLYD-LGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFV-----   78 (199)
Q Consensus         7 t~~~~~~~~~~~f~~--~ll~~~~~~l~~y~-~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesV-----   78 (199)
                      .++...|..++.-.+  -+++..-+.+.++- +++      +...  -+.+....+.... .++-.+||-.=--+     
T Consensus       402 ~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~------~~~~--~~~y~~s~vAv~~-~~~~vaVGG~Dgkvhvysl  472 (603)
T KOG0318|consen  402 VKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTK------VSSI--PIGYESSAVAVSP-DGSEVAVGGQDGKVHVYSL  472 (603)
T ss_pred             eecCCCceeEEEcCCCCEEEEEecCcEEEEecCCc------ceee--ccccccceEEEcC-CCCEEEEecccceEEEEEe
Confidence            467788988888877  66666666666665 543      2222  1122222222222 23444554221123     


Q ss_pred             ---------EeeccCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCce-EEEEEE--eCCEEEEEec
Q psy17021         79 ---------HKTSVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNL-IVKIES--MGHRIYVSDV  143 (199)
Q Consensus        79 ---------h~~~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~-i~~l~~--~~~~IlVGD~  143 (199)
                               ...+-+|+++++.-= +|..||+-  +.++.+|+...++. +- ..+.+|+. |.++.=  ...+++-|-+
T Consensus       473 ~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~-~~w~FHtakI~~~aWsP~n~~vATGSl  550 (603)
T KOG0318|consen  473 SGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KT-NRWAFHTAKINCVAWSPNNKLVATGSL  550 (603)
T ss_pred             cCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ec-ceeeeeeeeEEEEEeCCCceEEEeccc
Confidence                     334555666665432 34555553  78999999988765 22 22234443 666653  3457888888


Q ss_pred             cccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        144 QESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       144 ~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      -.+|.++..+.....  .++++..+.-|++++.+|+.|++.+-.+-|+-+..++
T Consensus       551 Dt~Viiysv~kP~~~--i~iknAH~~gVn~v~wlde~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  551 DTNVIIYSVKKPAKH--IIIKNAHLGGVNSVAWLDESTVVSSGQDANIKVWNVT  602 (603)
T ss_pred             cceEEEEEccChhhh--eEeccccccCceeEEEecCceEEeccCcceeEEeccc
Confidence            889999988654444  7788999999999999999999999999999887665

>KOG1896|consensus

Probab=95.35  E-value=0.085  Score=54.06  Aligned_cols=125  Identities=18%  Similarity=0.232  Sum_probs=81.6

Q ss_pred             ceeEEecCCCcceeecccCCEEEEeecCeeEEEecch-hhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe
Q psy17021          2 EFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGK-KKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK   80 (199)
Q Consensus         2 ~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~-k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~   80 (199)
                      ..+.+-|+.+.+.|.|+-+|+|+.|.|..+.+|++-+ -.|.-=+-.  ++|-|   +.++... ++=|.+||..+++.+
T Consensus      1089 Kel~~eE~KGtVsavceV~G~l~~~~GqKI~v~~l~r~~~ligVaFi--D~~~y---v~s~~~v-knlIl~gDV~ksisf 1162 (1366)
T KOG1896|consen 1089 KELYIEEQKGTVSAVCEVRGHLLSSQGQKIIVRKLDRDSELIGVAFI--DLPLY---VHSMKVV-KNLILAGDVMKSISF 1162 (1366)
T ss_pred             eeeehhhcccceEEEEEeccEEEEccCcEEEEEEeccCCcceeeEEe--cccee---EEehhhh-hhheehhhhhhceEE
Confidence            4566778889999999999999999999999999833 111111111  13332   2233333 255666777777777


Q ss_pred             eccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC--EEEEEeccccEEEEEEeCCC
Q psy17021         81 TSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH--RIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~--~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ..|...++.|.                       |+.+.+.. ...+.+..-+.|+  ..+|.|.-+-+.++.|+|+.
T Consensus      1163 l~fqeep~rls-----------------------L~srd~~~-l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~Pe~ 1216 (1366)
T KOG1896|consen 1163 LGFQEEPYRLS-----------------------LLSRDFEP-LNVYSTEFLVDGSNLSFLVSDADRNIHVYMYAPEN 1216 (1366)
T ss_pred             EEEccCceEEE-----------------------EeecCCch-hhceeeeeEEcCCeeEEEEEcCCCcEEEEEeCCCC
Confidence            66666665543                       33343333 3445555555554  67999999999999999874

>KOG4378|consensus

Probab=95.15  E-value=0.61  Score=44.23  Aligned_cols=132  Identities=17%  Similarity=0.231  Sum_probs=77.4

Q ss_pred             EecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccccCeEEEEeC--CEEEEEEcC
Q psy17021         34 YDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVG--RYLRLYDLG  111 (199)
Q Consensus        34 y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f~g~LLaavg--~~v~vy~l~  111 (199)
                      |.+.||.||--+..+    +   .++-|.++|.+.++   .....|..+..|.|  |+|.+..|+|.||  +++.+|+.+
T Consensus       172 ys~skr~lL~~asd~----G---~VtlwDv~g~sp~~---~~~~~HsAP~~gic--fspsne~l~vsVG~Dkki~~yD~~  239 (673)
T KOG4378|consen  172 YSPSKRFLLSIASDK----G---AVTLWDVQGMSPIF---HASEAHSAPCRGIC--FSPSNEALLVSVGYDKKINIYDIR  239 (673)
T ss_pred             cccccceeeEeeccC----C---eEEEEeccCCCccc---chhhhccCCcCcce--ecCCccceEEEecccceEEEeecc
Confidence            446666666555444    2   02334444322222   23456777777765  5699999998886  899999999


Q ss_pred             CcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC
Q psy17021        112 KKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN  180 (199)
Q Consensus       112 ~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~  180 (199)
                      .+++...-.+. .|...+...-.|-++++|...-=+..+-.+..+.-+..+...  ...||++.|-..-
T Consensus       240 s~~s~~~l~y~-~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah--~~sVt~vafq~s~  305 (673)
T KOG4378|consen  240 SQASTDRLTYS-HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAH--DASVTRVAFQPSP  305 (673)
T ss_pred             cccccceeeec-CCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeec--ccceeEEEeeecc
Confidence            87765544454 666566666666677777666555444433333333333222  2238888776444

>KOG1408|consensus

Probab=94.90  E-value=0.37  Score=47.47  Aligned_cols=188  Identities=16%  Similarity=0.189  Sum_probs=113.8

Q ss_pred             EEecCCCcceeecccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE---CCe-----
Q psy17021          5 HKTSVDEVPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV---GNA-----   74 (199)
Q Consensus         5 h~t~~~~~~~~~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v---gdk-----   74 (199)
                      |+.||--.-++.-.-..+||+..+  +.+-+||.|+.=+|-..-..  ...+||.+ .....|.+|..+   .|+     
T Consensus       500 HesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~--HSssITsv-KFa~~gln~~MiscGADksimFr  576 (1080)
T KOG1408|consen  500 HESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDG--HSSSITSV-KFACNGLNRKMISCGADKSIMFR  576 (1080)
T ss_pred             ccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcc--cccceeEE-EEeecCCceEEEeccCchhhhee
Confidence            555555555555555668888776  56899999998888765544  22445422 223333334322   121     


Q ss_pred             ----------eeEEEeeccCCcceEE--ccccCeE-EEEeCCEEEEEEcCCcceee--eeecc-CcCceEEEEEEeCCEE
Q psy17021         75 ----------MEFVHKTSVDEVPYAM--CPFQGAL-LVGVGRYLRLYDLGKKKLLR--KCENK-HLPNLIVKIESMGHRI  138 (199)
Q Consensus        75 ----------lesVh~~~~kG~v~aL--~~f~g~L-Laavg~~v~vy~l~~~~Ll~--~~~~~-~~~~~i~~l~~~~~~I  138 (199)
                                +-.-|.+.-++..|-|  .|=.+.+ .++...++++|+....+..+  |.+.. +....=+.++..|.+|
T Consensus       577 ~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~  656 (1080)
T KOG1408|consen  577 VNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYL  656 (1080)
T ss_pred             hhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEE
Confidence                      1122222223333333  3334554 46678999999997655433  11111 1222345666678888


Q ss_pred             EEEeccccEEEEEEeCCCCeEEEEeccCC-ceeEEEEEEE-eCCeEEEEcCCCcEEEEeecCC
Q psy17021        139 YVSDVQESVFLVRYKRYENQLLIFADDTQ-PRWITTSCVL-DYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       139 lVGD~~~Sv~ll~y~~~~~~l~~varD~~-~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      +..=--+-++++-|-..    +.+|+=+. .--||.+.|+ |-..+|..-.+|-|||.|+|-+
T Consensus       657 atScsdktl~~~Df~sg----EcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~  715 (1080)
T KOG1408|consen  657 ATSCSDKTLCFVDFVSG----ECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT  715 (1080)
T ss_pred             EEeecCCceEEEEeccc----hhhhhhcCcchheeeeeecccchhheeecCCceEEEEECchh
Confidence            88777788888888543    23444443 3457999999 5568999999999999999853

>KOG1188|consensus

Probab=94.64  E-value=0.82  Score=41.33  Aligned_cols=147  Identities=20%  Similarity=0.190  Sum_probs=86.4

Q ss_pred             cccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccccC
Q psy17021         17 CPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQG   95 (199)
Q Consensus        17 ~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f~g   95 (199)
                      ..|+.+++||.- +.+|+||.|.-|+|+++..-   |+-+    +     +-|++-.|....|+                
T Consensus        37 ~~~e~~vav~lSngsv~lyd~~tg~~l~~fk~~---~~~~----N-----~vrf~~~ds~h~v~----------------   88 (376)
T KOG1188|consen   37 DGFETAVAVSLSNGSVRLYDKGTGQLLEEFKGP---PATT----N-----GVRFISCDSPHGVI----------------   88 (376)
T ss_pred             cCcceeEEEEecCCeEEEEeccchhhhheecCC---CCcc----c-----ceEEecCCCCCeeE----------------
Confidence            348899999988 67999999999999988554   2311    1     12322223333333                


Q ss_pred             eEEEEeCCEEEEEEcCCcceeeeeecc-C--cCceEEEEEEeCCEEEEEec----cccEEEEEEeCCCCeEEEEeccCCc
Q psy17021         96 ALLVGVGRYLRLYDLGKKKLLRKCENK-H--LPNLIVKIESMGHRIYVSDV----QESVFLVRYKRYENQLLIFADDTQP  168 (199)
Q Consensus        96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~-~--~~~~i~~l~~~~~~IlVGD~----~~Sv~ll~y~~~~~~l~~varD~~~  168 (199)
                        -|+....|++|++...+=...-.+. +  ++.....+.+.++.|..|-.    +.+|.|+-+++ ..|+.-.--|-..
T Consensus        89 --s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~-~qq~l~~~~eSH~  165 (376)
T KOG1188|consen   89 --SCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRS-EQQLLRQLNESHN  165 (376)
T ss_pred             --EeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEecc-ccchhhhhhhhcc
Confidence              4666778899998533211111111 1  22233344457888888843    44555555543 3333333345556


Q ss_pred             eeEEEEEEE--eCCeEEEEcCCCcEEEE
Q psy17021        169 RWITTSCVL--DYNTVASADKFGNVCIV  194 (199)
Q Consensus       169 ~wvta~~~L--d~~t~l~aD~~gNl~vl  194 (199)
                      -.||.+.|-  |.+-++.+--+|=+-+|
T Consensus       166 DDVT~lrFHP~~pnlLlSGSvDGLvnlf  193 (376)
T KOG1188|consen  166 DDVTQLRFHPSDPNLLLSGSVDGLVNLF  193 (376)
T ss_pred             CcceeEEecCCCCCeEEeecccceEEee
Confidence            679999998  44567777777655444

>KOG1539|consensus

Probab=94.56  E-value=1.8  Score=43.15  Aligned_cols=117  Identities=15%  Similarity=0.202  Sum_probs=82.9

Q ss_pred             CeeeEEEee-ccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021         73 NAMEFVHKT-SVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        73 dklesVh~~-~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~  151 (199)
                      .++.+++.- +....+.|+.+..+.+.||-|+++.+|.-++..   ++.+.....-+.-+...|+.++.+|...++.+..
T Consensus        64 ~kl~ll~vs~~lp~~I~alas~~~~vy~A~g~~i~~~~rgk~i---~~~~~~~~a~v~~l~~fGe~lia~d~~~~l~vw~  140 (910)
T KOG1539|consen   64 NKLNLLFVSKPLPDKITALASDKDYVYVASGNKIYAYARGKHI---RHTTLLHGAKVHLLLPFGEHLIAVDISNILFVWK  140 (910)
T ss_pred             cceEEEEecCCCCCceEEEEecCceEEEecCcEEEEEEccceE---EEEeccccceEEEEeeecceEEEEEccCcEEEEE
Confidence            344444333 677788899999999999999999999998642   3444422235888999999999999999999998


Q ss_pred             EeCC-CC-----eEEEEeccCCceeEEEEEEEeC--CeEEEEcCCCcEEEEee
Q psy17021        152 YKRY-EN-----QLLIFADDTQPRWITTSCVLDY--NTVASADKFGNVCIVST  196 (199)
Q Consensus       152 y~~~-~~-----~l~~varD~~~~wvta~~~Ld~--~t~l~aD~~gNl~vlr~  196 (199)
                      .... +.     .+.+..-|.    +||+...+-  +-++++-..|++.++.+
T Consensus       141 ~s~~~~e~~l~~~~~~~~~~~----Ital~HP~TYLNKIvvGs~~G~lql~Nv  189 (910)
T KOG1539|consen  141 TSSIQEELYLQSTFLKVEGDF----ITALLHPSTYLNKIVVGSSQGRLQLWNV  189 (910)
T ss_pred             eccccccccccceeeeccCCc----eeeEecchhheeeEEEeecCCcEEEEEe
Confidence            8652 22     233333333    777766543  35788888898877653

>KOG0278|consensus

Probab=94.26  E-value=0.76  Score=40.29  Aligned_cols=175  Identities=14%  Similarity=0.098  Sum_probs=104.4

Q ss_pred             ecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeee---------eEEEEEcCceeEECCeeeEEEeeccCC
Q psy17021         16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAH---------QTHTHSGRSDRLVGNAMEFVHKTSVDE   85 (199)
Q Consensus        16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~---------~~~~~~~~~ri~vgdklesVh~~~~kG   85 (199)
                      +..-..+||-|-- +.||+|||.+-+-=-|-...  .|..|...         .+....+.=|...-..-.-++..+++.
T Consensus       108 f~~ds~~lltgg~ekllrvfdln~p~App~E~~g--htg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s  185 (334)
T KOG0278|consen  108 FSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISG--HTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNS  185 (334)
T ss_pred             ecccchhhhccchHHHhhhhhccCCCCCchhhcC--CCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCC
Confidence            3344556776654 77999999774322222122  44444322         222222222333333445688889999


Q ss_pred             cceEEcccc-CeE-EEEeCCEEEEEEcCCcceeeeeeccCcCceEE--EEEEeCCEEEEEeccccEEEEEEeCCCCeEEE
Q psy17021         86 VPYAMCPFQ-GAL-LVGVGRYLRLYDLGKKKLLRKCENKHLPNLIV--KIESMGHRIYVSDVQESVFLVRYKRYENQLLI  161 (199)
Q Consensus        86 ~v~aL~~f~-g~L-Laavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~--~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~  161 (199)
                      +|+++.--+ |++ -.|=|+.|..|+-..=.+++  +++ +|..|.  ||...+++.++|--+  +.+++|+-+.+.=++
T Consensus       186 ~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lK--s~k-~P~nV~SASL~P~k~~fVaGged--~~~~kfDy~TgeEi~  260 (334)
T KOG0278|consen  186 PVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLK--SYK-MPCNVESASLHPKKEFFVAGGED--FKVYKFDYNTGEEIG  260 (334)
T ss_pred             CCcceeeccCCCEEEEecCceeEEecccccccee--ecc-CccccccccccCCCceEEecCcc--eEEEEEeccCCceee
Confidence            999987664 554 57889999999987666655  454 566554  566667777777544  345566544332222


Q ss_pred             EeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        162 FADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       162 varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .-.--.+--|-|+.|- |.+.|..+-.+|.|.+.+.-
T Consensus       261 ~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~  297 (334)
T KOG0278|consen  261 SYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT  297 (334)
T ss_pred             ecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence            1112223345566666 66689999999999887753

>PTZ00420 coronin; Provisional

Probab=94.20  E-value=5.6  Score=38.34  Aligned_cols=115  Identities=14%  Similarity=0.072  Sum_probs=61.2

Q ss_pred             ccCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcC--ceEEEE---EEeCCEEEEEecc----ccEEE
Q psy17021         82 SVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLP--NLIVKI---ESMGHRIYVSDVQ----ESVFL  149 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~--~~i~~l---~~~~~~IlVGD~~----~Sv~l  149 (199)
                      ...+.++++.-- .|.+|++.  +++|++|++...+.+..-......  .....+   ...+++|+.+-.-    +.|.+
T Consensus       165 ~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkL  244 (568)
T PTZ00420        165 NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKL  244 (568)
T ss_pred             ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEE
Confidence            345667776532 46776644  679999999876654321111011  112222   2245677764433    35777


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEEeCC---eEEEEcCCCcEEEEeecC
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVLDYN---TVASADKFGNVCIVSTYR  198 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~Ld~~---t~l~aD~~gNl~vlr~~~  198 (199)
                      +..+....-+..+.-|..+.-++  -+-|.+   .|++|-.++|+.++.+..
T Consensus       245 WDlr~~~~pl~~~~ld~~~~~L~--p~~D~~tg~l~lsGkGD~tIr~~e~~~  294 (568)
T PTZ00420        245 WDLKNTTSALVTMSIDNASAPLI--PHYDESTGLIYLIGKGDGNCRYYQHSL  294 (568)
T ss_pred             EECCCCCCceEEEEecCCccceE--EeeeCCCCCEEEEEECCCeEEEEEccC
Confidence            76553334444433333222111  222433   588888999999998643

>KOG2111|consensus

Probab=93.94  E-value=4.6  Score=36.34  Aligned_cols=67  Identities=12%  Similarity=0.093  Sum_probs=44.9

Q ss_pred             EEEEEeCCEEEEEeccccEEEEEEeCCC-CeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEee
Q psy17021        129 VKIESMGHRIYVSDVQESVFLVRYKRYE-NQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVST  196 (199)
Q Consensus       129 ~~l~~~~~~IlVGD~~~Sv~ll~y~~~~-~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~  196 (199)
                      +.|...|.+++-+ ..++--+=-|+.+. ..+.|+=|...+..+.++.|=.+. -+.++-.-|-+++|++
T Consensus       187 v~Ln~~Gt~vATa-StkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l  255 (346)
T KOG2111|consen  187 VALNLQGTLVATA-STKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL  255 (346)
T ss_pred             EEEcCCccEEEEe-ccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence            3344345544332 33444344566554 577999999999999999998555 4566677789999875

>KOG0283|consensus

Probab=93.38  E-value=1.6  Score=42.93  Aligned_cols=104  Identities=17%  Similarity=0.209  Sum_probs=70.8

Q ss_pred             eEEccccCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE--E
Q psy17021         88 YAMCPFQGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL--I  161 (199)
Q Consensus        88 ~aL~~f~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~--~  161 (199)
                      -+|.|.+++ .+-| +..|+|+|.+.+++.   ..+.+.+-+|+.+.-  .|..++||-+-=.+.|+.  ....++.  .
T Consensus       415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~V---v~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~--t~~lk~~~~~  489 (712)
T KOG0283|consen  415 VAFNPVDDRYFISGSLDGKVRLWSISDKKV---VDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYD--TEGLKLVSDF  489 (712)
T ss_pred             EEecccCCCcEeecccccceEEeecCcCee---EeehhhhhhheeEEeccCCceEEEEEeccEEEEEE--ccCCeEEEee
Confidence            356788774 5544 589999999998875   344445556666654  588999999888777764  3344332  1


Q ss_pred             EeccC-----CceeEEEEEEE--eCCeEEEEcCCCcEEEEee
Q psy17021        162 FADDT-----QPRWITTSCVL--DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       162 varD~-----~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~  196 (199)
                      --++.     ..+-||++++.  +.+.+|++-++.-|.++-.
T Consensus       490 ~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~  531 (712)
T KOG0283|consen  490 HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDG  531 (712)
T ss_pred             eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEec
Confidence            12222     23369999999  4446999999988888753

>KOG0315|consensus

Probab=92.88  E-value=6.2  Score=34.68  Aligned_cols=151  Identities=15%  Similarity=0.197  Sum_probs=92.6

Q ss_pred             eeEEecCCCcceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEee
Q psy17021          3 FVHKTSVDEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKT   81 (199)
Q Consensus         3 ~~h~t~~~~~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~   81 (199)
                      |-|..+|..+  .+.+-|+-|++|-- +++|+||||--+    |.... +|.-                 +-..++++. 
T Consensus       121 ~~~~spVn~v--vlhpnQteLis~dqsg~irvWDl~~~~----c~~~l-iPe~-----------------~~~i~sl~v-  175 (311)
T KOG0315|consen  121 YQHNSPVNTV--VLHPNQTELISGDQSGNIRVWDLGENS----CTHEL-IPED-----------------DTSIQSLTV-  175 (311)
T ss_pred             ccCCCCcceE--EecCCcceEEeecCCCcEEEEEccCCc----ccccc-CCCC-----------------CcceeeEEE-
Confidence            3355555554  35789999999987 789999998721    22221 3331                 112333332 


Q ss_pred             ccCCcceEEccccCeEEEEeCCE--EEEEEcCCc----ceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEe
Q psy17021         82 SVDEVPYAMCPFQGALLVGVGRY--LRLYDLGKK----KLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        82 ~~kG~v~aL~~f~g~LLaavg~~--v~vy~l~~~----~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~  153 (199)
                                .-.|..|+|+|++  .++|++-..    +|..+-.++.-..++.+.-  ..+.+++..-.-+-+.+.+- 
T Consensus       176 ----------~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~-  244 (311)
T KOG0315|consen  176 ----------MPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNT-  244 (311)
T ss_pred             ----------cCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEec-
Confidence                      1357778888765  677777432    3555444442223444333  24557777777777777654 


Q ss_pred             CCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021        154 RYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN  190 (199)
Q Consensus       154 ~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN  190 (199)
                       +.--..|..-+-.+||+=.+.|--++.||++-...|
T Consensus       245 -~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~  280 (311)
T KOG0315|consen  245 -DDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDH  280 (311)
T ss_pred             -CCceeeEEEeecCCceEEeeeeccCccEEEecCCCC
Confidence             333345666677779999999998888887765554

>KOG2106|consensus

Probab=92.79  E-value=4  Score=38.90  Aligned_cols=174  Identities=13%  Similarity=0.084  Sum_probs=114.9

Q ss_pred             EEecCC---CcceeecccCCEEEEeecCeeEEEe-c-----------chhhhhhhhhhcccccCceeeeeEEEEEcCcee
Q psy17021          5 HKTSVD---EVPYAMCPFQGALLVGVGRYLRLYD-L-----------GKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR   69 (199)
Q Consensus         5 h~t~~~---~~~~~~~~f~~~ll~~~~~~l~~y~-~-----------g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri   69 (199)
                      -+||+.   +.|.++++=++-++||.-++-.|.. +           |. +|+-=+.    .|... ..++--+-+-=|+
T Consensus       321 r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~d-elwgla~----hps~~-q~~T~gqdk~v~l  394 (626)
T KOG2106|consen  321 RETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGD-ELWGLAT----HPSKN-QLLTCGQDKHVRL  394 (626)
T ss_pred             ccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEeccc-ceeeEEc----CCChh-heeeccCcceEEE
Confidence            355555   3789999999999999987766654 1           11 1111010    11111 0111111111133


Q ss_pred             EECCeeeEEEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEE
Q psy17021         70 LVGNAMEFVHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVF  148 (199)
Q Consensus        70 ~vgdklesVh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~  148 (199)
                      .-+.+++---.++....+..+.|+. -|.+|- .....+.+.+..+|+..-.. +.|..++.-...|++++||---.++.
T Consensus       395 W~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iy  472 (626)
T KOG2106|consen  395 WNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIY  472 (626)
T ss_pred             ccCCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEE
Confidence            3355566555666677777788887 554443 46677888888877664433 46777888888999999999999999


Q ss_pred             EEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC
Q psy17021        149 LVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK  187 (199)
Q Consensus       149 ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~  187 (199)
                      +++.+++.++...+.+-.. .-+|..+.-.++.|+.+..
T Consensus       473 iy~Vs~~g~~y~r~~k~~g-s~ithLDwS~Ds~~~~~~S  510 (626)
T KOG2106|consen  473 IYRVSANGRKYSRVGKCSG-SPITHLDWSSDSQFLVSNS  510 (626)
T ss_pred             EEEECCCCcEEEEeeeecC-ceeEEeeecCCCceEEecc
Confidence            9999998888888888777 7888888887777777654

>PTZ00421 coronin; Provisional

Probab=92.45  E-value=9.8  Score=35.92  Aligned_cols=61  Identities=13%  Similarity=0.224  Sum_probs=35.9

Q ss_pred             EccccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEE
Q psy17021         90 MCPFQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        90 L~~f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y  152 (199)
                      +.|-.+.+|+  +...+|++|++...+.+.....  ....+.++.-  .++.++.|..-..+.++..
T Consensus       133 f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~--h~~~V~sla~spdG~lLatgs~Dg~IrIwD~  197 (493)
T PTZ00421        133 FHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC--HSDQITSLEWNLDGSLLCTTSKDKKLNIIDP  197 (493)
T ss_pred             eCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC--CCCceEEEEEECCCCEEEEecCCCEEEEEEC
Confidence            3444444443  4468999999987654333221  1223555553  5778888877777776543

>KOG0315|consensus

Probab=92.35  E-value=6.5  Score=34.55  Aligned_cols=101  Identities=15%  Similarity=0.184  Sum_probs=61.8

Q ss_pred             cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021         94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI  171 (199)
Q Consensus        94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv  171 (199)
                      .|+-...-  ..++++|++....-.|.-... .+...+-+.....-+++||----|.+.-..+..-.-+++-.|-  ..+
T Consensus        94 dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~--~~i  170 (311)
T KOG0315|consen   94 DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD--TSI  170 (311)
T ss_pred             cCeEEEecCCCceEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCC--cce
Confidence            45544332  478999999764433332232 3334445555566678999777777765544332223333333  455


Q ss_pred             EEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        172 TTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       172 ta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .++.+. |...++++..-||.++.|+.
T Consensus       171 ~sl~v~~dgsml~a~nnkG~cyvW~l~  197 (311)
T KOG0315|consen  171 QSLTVMPDGSMLAAANNKGNCYVWRLL  197 (311)
T ss_pred             eeEEEcCCCcEEEEecCCccEEEEEcc
Confidence            666666 55578889999999999875

>KOG0296|consensus

Probab=91.61  E-value=5.3  Score=36.55  Aligned_cols=115  Identities=12%  Similarity=0.085  Sum_probs=74.3

Q ss_pred             EEEeeccCCcceEEccc-cCeEEEEeC--CEEEEEEcCCcc-eeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEE
Q psy17021         77 FVHKTSVDEVPYAMCPF-QGALLVGVG--RYLRLYDLGKKK-LLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        77 sVh~~~~kG~v~aL~~f-~g~LLaavg--~~v~vy~l~~~~-Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y  152 (199)
                      .+++.+-.++|+|+.-- +..++|.=|  .+=++|+..... +-....++++ ...++-+..+.+++-|||--=|.+.+-
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDS-Vt~~~FshdgtlLATGdmsG~v~v~~~  135 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDS-VTCCSFSHDGTLLATGDMSGKVLVFKV  135 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCc-eEEEEEccCceEEEecCCCccEEEEEc
Confidence            45667888999885432 556665543  678899997655 4445556651 123334456889999999888877776


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEEe----CCeEEEEcCCCcEEEEeecC
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVLD----YNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~Ld----~~t~l~aD~~gNl~vlr~~~  198 (199)
                      ++...+-...      -.+..++-|-    -..++.++++|++|++++|.
T Consensus       136 stg~~~~~~~------~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~  179 (399)
T KOG0296|consen  136 STGGEQWKLD------QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS  179 (399)
T ss_pred             ccCceEEEee------cccCceEEEEecccccEEEeecCCCcEEEEECCC
Confidence            5443333322      1233334442    23789999999999999997

>KOG2394|consensus

Probab=90.91  E-value=1  Score=42.93  Aligned_cols=90  Identities=18%  Similarity=0.254  Sum_probs=63.2

Q ss_pred             CCcceEEccc-cCeEEEEeC--CEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021         84 DEVPYAMCPF-QGALLVGVG--RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLL  160 (199)
Q Consensus        84 kG~v~aL~~f-~g~LLaavg--~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~  160 (199)
                      +|+++.++-. +|+-||.|.  ..||||++...+|+...-.+-.....++-.-.|.+|++|---+=|+++.|.  +.  .
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~--er--R  365 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE--ER--R  365 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEec--cc--e
Confidence            3555554433 577777774  679999999888776533321334566666779999999888889999884  33  4


Q ss_pred             EEeccC-CceeEEEEEEE
Q psy17021        161 IFADDT-QPRWITTSCVL  177 (199)
Q Consensus       161 ~varD~-~~~wvta~~~L  177 (199)
                      .+||-. ..-||+.++|=
T Consensus       366 VVARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  366 VVARGQGHKSWVSVVAFD  383 (636)
T ss_pred             EEEeccccccceeeEeec
Confidence            466743 47799999983

>KOG1273|consensus

Probab=90.79  E-value=4.9  Score=36.36  Aligned_cols=144  Identities=17%  Similarity=0.232  Sum_probs=89.4

Q ss_pred             ecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccc-
Q psy17021         16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPF-   93 (199)
Q Consensus        16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f-   93 (199)
                      +..+..-|.+|.. +.+.+||+--..              |           .|++-+      |.    -|+.++|.= 
T Consensus        31 Fs~~G~~lAvGc~nG~vvI~D~~T~~--------------i-----------ar~lsa------H~----~pi~sl~WS~   75 (405)
T KOG1273|consen   31 FSRWGDYLAVGCANGRVVIYDFDTFR--------------I-----------ARMLSA------HV----RPITSLCWSR   75 (405)
T ss_pred             eccCcceeeeeccCCcEEEEEccccc--------------h-----------hhhhhc------cc----cceeEEEecC
Confidence            3456777888887 679999974321              1           111111      11    133334433 


Q ss_pred             cCe-EE-EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021         94 QGA-LL-VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRW  170 (199)
Q Consensus        94 ~g~-LL-aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~w  170 (199)
                      +|+ || ++-..++.+|++-+..+++..-+. .|..-.+... ..|..++.=+.+|-.+..|.....+......|-.-..
T Consensus        76 dgr~LltsS~D~si~lwDl~~gs~l~rirf~-spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~  154 (405)
T KOG1273|consen   76 DGRKLLTSSRDWSIKLWDLLKGSPLKRIRFD-SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNS  154 (405)
T ss_pred             CCCEeeeecCCceeEEEeccCCCceeEEEcc-CccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccc
Confidence            344 44 445789999999888777766664 5655455554 4566666666679899999875666666666666555


Q ss_pred             EEEEEEEeCC--eEEEEcCCCcEEEEe
Q psy17021        171 ITTSCVLDYN--TVASADKFGNVCIVS  195 (199)
Q Consensus       171 vta~~~Ld~~--t~l~aD~~gNl~vlr  195 (199)
                      +-+..+-|..  .++.+-.-|-|.++.
T Consensus       155 sas~~~fdr~g~yIitGtsKGkllv~~  181 (405)
T KOG1273|consen  155 SASHGVFDRRGKYIITGTSKGKLLVYD  181 (405)
T ss_pred             ccccccccCCCCEEEEecCcceEEEEe
Confidence            5555555554  577777777777664

>KOG0268|consensus

Probab=90.50  E-value=3.7  Score=37.63  Aligned_cols=153  Identities=10%  Similarity=0.166  Sum_probs=87.7

Q ss_pred             CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-----e----EEEeeccCCcceEEcccc-CeEE
Q psy17021         29 RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM-----E----FVHKTSVDEVPYAMCPFQ-GALL   98 (199)
Q Consensus        29 ~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl-----e----sVh~~~~kG~v~aL~~f~-g~LL   98 (199)
                      +.+++|||..+..++-.+.-.   ++++.|....   +.-..+||--     .    .+|...-++.++.+.... +.+.
T Consensus        89 G~VkiWnlsqR~~~~~f~AH~---G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~F  162 (433)
T KOG0268|consen   89 GEVKIWNLSQRECIRTFKAHE---GLVRGICVTQ---TSFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVF  162 (433)
T ss_pred             ceEEEEehhhhhhhheeeccc---CceeeEEecc---cceEEecCCcceeeeeccCCcceeeeccccccccccccccccc
Confidence            789999999988887544432   3443332221   2333555431     1    334444444444544443 3577


Q ss_pred             EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeCCC--CeEEEEeccCCceeEEE
Q psy17021         99 VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKRYE--NQLLIFADDTQPRWITT  173 (199)
Q Consensus        99 aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~~~--~~l~~varD~~~~wvta  173 (199)
                      |..|..+-+|+.....-++.-++. +.+ +.+++..   -+.|..+-.-+|+.++--....  .+.+.--|-..-.|-- 
T Consensus       163 aTcGe~i~IWD~~R~~Pv~smswG-~Dt-i~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-  239 (433)
T KOG0268|consen  163 ATCGEQIDIWDEQRDNPVSSMSWG-ADS-ISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNP-  239 (433)
T ss_pred             cccCceeeecccccCCccceeecC-CCc-eeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCc-
Confidence            889999999999765543433332 333 5555542   3555666677798888654322  2334333333333321 


Q ss_pred             EEEEeCCeEEEEcCCCcEEEE
Q psy17021        174 SCVLDYNTVASADKFGNVCIV  194 (199)
Q Consensus       174 ~~~Ld~~t~l~aD~~gNl~vl  194 (199)
                          .-..|.+|+.+.||+++
T Consensus       240 ----eafnF~~a~ED~nlY~~  256 (433)
T KOG0268|consen  240 ----EAFNFVAANEDHNLYTY  256 (433)
T ss_pred             ----cccceeeccccccceeh
Confidence                23479999999999987

>KOG0291|consensus

Probab=90.38  E-value=19  Score=35.94  Aligned_cols=156  Identities=16%  Similarity=0.181  Sum_probs=97.0

Q ss_pred             ceeEEecCCCcceeecccC---CEEEEeecC--eeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECC--
Q psy17021          2 EFVHKTSVDEVPYAMCPFQ---GALLVGVGR--YLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGN--   73 (199)
Q Consensus         2 ~~~h~t~~~~~~~~~~~f~---~~ll~~~~~--~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgd--   73 (199)
                      +++|.-.|.+.|-.-..|+   +-+.+|.++  .|-+|+.--..-.-|-+.-  .+.    +.++... .|++|+.|-  
T Consensus       298 ~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH--~~~----i~~l~YSpDgq~iaTG~eD  371 (893)
T KOG0291|consen  298 NLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH--SDR----ITSLAYSPDGQLIATGAED  371 (893)
T ss_pred             eEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecccc--ccc----eeeEEECCCCcEEEeccCC
Confidence            5789999998888888887   568889997  8999997543333333321  222    3344443 345777651  


Q ss_pred             -------e---eeEEEeeccCCcceEEcccc-CeEE--EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEE
Q psy17021         74 -------A---MEFVHKTSVDEVPYAMCPFQ-GALL--VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRI  138 (199)
Q Consensus        74 -------k---lesVh~~~~kG~v~aL~~f~-g~LL--aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~I  138 (199)
                             .   +=.+++++-..+|++++--. |+.+  ++...+|+.|++..-.=-|--... .|.-..++.+  .|+.+
T Consensus       372 gKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P-~p~QfscvavD~sGelV  450 (893)
T KOG0291|consen  372 GKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSP-EPIQFSCVAVDPSGELV  450 (893)
T ss_pred             CcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCC-CceeeeEEEEcCCCCEE
Confidence                   1   23567777788888876543 5543  556899999999764322211111 2333444554  47776


Q ss_pred             EEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021        139 YVSDVQESVFLVRYKRYENQLLIFADD  165 (199)
Q Consensus       139 lVGD~~~Sv~ll~y~~~~~~l~~varD  165 (199)
                      .+|+ ++|.-+.-|.-+.+++.++=..
T Consensus       451 ~AG~-~d~F~IfvWS~qTGqllDiLsG  476 (893)
T KOG0291|consen  451 CAGA-QDSFEIFVWSVQTGQLLDILSG  476 (893)
T ss_pred             Eeec-cceEEEEEEEeecCeeeehhcC
Confidence            6665 5777777777777777554433

>KOG0318|consensus

Probab=90.31  E-value=18  Score=34.78  Aligned_cols=164  Identities=16%  Similarity=0.145  Sum_probs=90.4

Q ss_pred             CEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee--EECCe-------ee--EEEeeccCCcceE
Q psy17021         21 GALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR--LVGNA-------ME--FVHKTSVDEVPYA   89 (199)
Q Consensus        21 ~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri--~vgdk-------le--sVh~~~~kG~v~a   89 (199)
                      .-.-+|.-.+||.-+++...-=+--..+  ++..|.   .+....++-+  ++.++       +.  +.--..|+-++.|
T Consensus       376 ~~~t~g~Dd~l~~~~~~~~~~t~~~~~~--lg~QP~---~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vA  450 (603)
T KOG0318|consen  376 ELFTIGWDDTLRVISLKDNGYTKSEVVK--LGSQPK---GLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVA  450 (603)
T ss_pred             cEEEEecCCeEEEEecccCcccccceee--cCCCce---eEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEE
Confidence            4457888899999987553322211122  333332   1222211112  22111       11  2223567778888


Q ss_pred             EccccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccC
Q psy17021         90 MCPFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDT  166 (199)
Q Consensus        90 L~~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~  166 (199)
                      ++|-...+.+| ...+|++|.+....|..++-.....--++.+.  ..+.++++||+++=+.++....  +..      .
T Consensus       451 v~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s--~~~------~  522 (603)
T KOG0318|consen  451 VSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVAS--REV------K  522 (603)
T ss_pred             EcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEccc--Cce------e
Confidence            88877766554 46889999998766544433221222355554  4577999999999998876533  222      3


Q ss_pred             CceeEE------EEEEEeCC-eEEEEcCCCcEEEEeec
Q psy17021        167 QPRWIT------TSCVLDYN-TVASADKFGNVCIVSTY  197 (199)
Q Consensus       167 ~~~wvt------a~~~Ld~~-t~l~aD~~gNl~vlr~~  197 (199)
                      ..+|..      |+.-=.++ .+.-+--+-|++++.+.
T Consensus       523 ~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~  560 (603)
T KOG0318|consen  523 TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK  560 (603)
T ss_pred             cceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence            445552      22222222 45666777888888654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=89.08  E-value=14  Score=31.89  Aligned_cols=102  Identities=16%  Similarity=0.204  Sum_probs=58.7

Q ss_pred             eEEEE-e-CCEEEEEEcCCc-ceeeee----eccCcCceEEEE--EEeCCEEEEEec-cccEEEEEEeCCCCeEEEEe--
Q psy17021         96 ALLVG-V-GRYLRLYDLGKK-KLLRKC----ENKHLPNLIVKI--ESMGHRIYVSDV-QESVFLVRYKRYENQLLIFA--  163 (199)
Q Consensus        96 ~LLaa-v-g~~v~vy~l~~~-~Ll~~~----~~~~~~~~i~~l--~~~~~~IlVGD~-~~Sv~ll~y~~~~~~l~~va--  163 (199)
                      +++++ . .++|.+|++... .+....    ... ....+..+  +..+.+++|.+- ..+++++.+++..+++..+.  
T Consensus       139 ~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~  217 (330)
T PRK11028        139 TLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTL  217 (330)
T ss_pred             EEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEE
Confidence            45443 3 389999999753 332110    111 11223333  345669989987 67999999986545553332  


Q ss_pred             ----cc-CCceeEEEEEEE-eCCeEEEEcC-CCcEEEEeecC
Q psy17021        164 ----DD-TQPRWITTSCVL-DYNTVASADK-FGNVCIVSTYR  198 (199)
Q Consensus       164 ----rD-~~~~wvta~~~L-d~~t~l~aD~-~gNl~vlr~~~  198 (199)
                          .+ ..++|..++.+= |...+.+++. .+.|.++.+.+
T Consensus       218 ~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~  259 (330)
T PRK11028        218 DMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSE  259 (330)
T ss_pred             ecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeC
Confidence                11 245777666654 3346777776 45677777643

>KOG2048|consensus

Probab=88.49  E-value=16  Score=35.78  Aligned_cols=154  Identities=14%  Similarity=0.050  Sum_probs=93.1

Q ss_pred             cceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEc
Q psy17021         12 VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMC   91 (199)
Q Consensus        12 ~~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~   91 (199)
                      .+.|++|....+..|.=..+++|-|----+++ -++..++|.+.             +   +..           -..+.
T Consensus       386 s~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk-~~~v~~~~~~~-------------~---~a~-----------~i~ft  437 (691)
T KOG2048|consen  386 SCAAISPDGNLIAISTVSRTKIYRLQPDPNVK-VINVDDVPLAL-------------L---DAS-----------AISFT  437 (691)
T ss_pred             eeeccCCCCCEEEEeeccceEEEEeccCccee-EEEeccchhhh-------------c---cce-----------eeEEE
Confidence            68899999999999999999999873311111 11110011100             0   000           01111


Q ss_pred             cccCeE-EEEeC-CEEEEEEcCC---cceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021         92 PFQGAL-LVGVG-RYLRLYDLGK---KKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus        92 ~f~g~L-Laavg-~~v~vy~l~~---~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var  164 (199)
                      .-++++ +++.+ ..+..+++..   |+|....+.. ...+|+.|.+  .|++|+|.+-.--|.++  +-+..+..++.-
T Consensus       438 id~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~-~~~~I~~l~~SsdG~yiaa~~t~g~I~v~--nl~~~~~~~l~~  514 (691)
T KOG2048|consen  438 IDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQA-KCPSISRLVVSSDGNYIAAISTRGQIFVY--NLETLESHLLKV  514 (691)
T ss_pred             ecCceEEEEecccceeEEEEecCcchhhhhcccccc-CCCcceeEEEcCCCCEEEEEeccceEEEE--Ecccceeecchh
Confidence            122333 34432 2355555543   3344443332 3345666664  69999999966666555  556677788887


Q ss_pred             cCCceeEEEEEEE--eCCeEEEEcCCCcEEEEeec
Q psy17021        165 DTQPRWITTSCVL--DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       165 D~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +++ +.|||+.+-  +..++++++.++-+|.|.++
T Consensus       515 rln-~~vTa~~~~~~~~~~lvvats~nQv~efdi~  548 (691)
T KOG2048|consen  515 RLN-IDVTAAAFSPFVRNRLVVATSNNQVFEFDIE  548 (691)
T ss_pred             ccC-cceeeeeccccccCcEEEEecCCeEEEEecc
Confidence            887 899999998  55689999999999988763

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=88.44  E-value=14  Score=30.99  Aligned_cols=119  Identities=13%  Similarity=0.164  Sum_probs=73.3

Q ss_pred             eeEEecCCCcceeecccCCEEEEeecCeeEEEecchh---hhhhhhhhcccc--cCceeeeeEEEEEcCcee--------
Q psy17021          3 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKK---KLLRKCENKVRI--KGFRKAHQTHTHSGRSDR--------   69 (199)
Q Consensus         3 ~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k---~ll~k~~~~~~~--~~~~~~~~~~~~~~~~ri--------   69 (199)
                      .+.+-.+.+.|.+|+-+++++.+|..+...++|+...   .|+.-......+  +..-..-......+++..        
T Consensus       131 ~~ke~~lp~~~~~i~~~~~~i~v~~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~~~~~g  210 (275)
T PF00780_consen  131 LLKEISLPDPPSSIAFLGNKICVGTSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLCYDNIG  210 (275)
T ss_pred             eeEEEEcCCCcEEEEEeCCEEEEEeCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEEecceE
Confidence            3456677899999999999999999999999998742   232211110000  000000112222221222        


Q ss_pred             -EE---CCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeecc
Q psy17021         70 -LV---GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK  122 (199)
Q Consensus        70 -~v---gdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~  122 (199)
                       ++   |+..+ -...++...|.++.-...+|++--.+.+-+|.+.+.+|++.-...
T Consensus       211 ~fv~~~G~~~r-~~~i~W~~~p~~~~~~~pyli~~~~~~iEV~~~~~~~lvQ~i~~~  266 (275)
T PF00780_consen  211 VFVNKNGEPSR-KSTIQWSSAPQSVAYSSPYLIAFSSNSIEVRSLETGELVQTIPLP  266 (275)
T ss_pred             EEEcCCCCcCc-ccEEEcCCchhEEEEECCEEEEECCCEEEEEECcCCcEEEEEECC
Confidence             22   33333 345567778888887788888888899999999888887655443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG0771|consensus

Probab=87.63  E-value=22  Score=32.79  Aligned_cols=68  Identities=15%  Similarity=0.119  Sum_probs=51.7

Q ss_pred             eEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeE---EEEcCCCcEEEEee
Q psy17021        127 LIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTV---ASADKFGNVCIVST  196 (199)
Q Consensus       127 ~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~---l~aD~~gNl~vlr~  196 (199)
                      -|.++.+  .|.++++|-+--||.++.-  .+=+...+.+.-+...||+++|+.+.++   +.+|..-+++.+..
T Consensus       283 siSsl~VS~dGkf~AlGT~dGsVai~~~--~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  283 SISSLAVSDDGKFLALGTMDGSVAIYDA--KSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             cceeEEEcCCCcEEEEeccCCcEEEEEe--ceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            4777776  4889999999889988864  4567788888888889999999977644   45566666665544

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=87.37  E-value=15  Score=30.32  Aligned_cols=113  Identities=15%  Similarity=0.070  Sum_probs=72.6

Q ss_pred             eccCCcceEEcc-ccCeEEEEeCCEEEEEEcCCcceeeeeecc--C-cCceEEEEEEe-CCEEEEEeccccE-------E
Q psy17021         81 TSVDEVPYAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENK--H-LPNLIVKIESM-GHRIYVSDVQESV-------F  148 (199)
Q Consensus        81 ~~~kG~v~aL~~-f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~--~-~~~~i~~l~~~-~~~IlVGD~~~Sv-------~  148 (199)
                      ....++..+... =+|+++++....+.++++...+....+...  . ....+..+... +..+.++|+...-       .
T Consensus        37 ~~~~~~~G~~~~~~~g~l~v~~~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~  116 (246)
T PF08450_consen   37 IDLPGPNGMAFDRPDGRLYVADSGGIAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGS  116 (246)
T ss_dssp             EESSSEEEEEEECTTSEEEEEETTCEEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEE
T ss_pred             EecCCCceEEEEccCCEEEEEEcCceEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccc
Confidence            344444444444 358999999999999999876644444431  1 24457778764 3469999997753       6


Q ss_pred             EEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc-EEEEee
Q psy17021        149 LVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGN-VCIVST  196 (199)
Q Consensus       149 ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN-l~vlr~  196 (199)
                      +++++++ ++...+..+.  .....+.+- |.++++++|...+ |+.+.+
T Consensus       117 v~~~~~~-~~~~~~~~~~--~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~  163 (246)
T PF08450_consen  117 VYRIDPD-GKVTVVADGL--GFPNGIAFSPDGKTLYVADSFNGRIWRFDL  163 (246)
T ss_dssp             EEEEETT-SEEEEEEEEE--SSEEEEEEETTSSEEEEEETTTTEEEEEEE
T ss_pred             eEEECCC-CeEEEEecCc--ccccceEECCcchheeecccccceeEEEec
Confidence            8888887 7777777664  334456655 4557888887766 444443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG0306|consensus

Probab=86.68  E-value=5.9  Score=39.39  Aligned_cols=30  Identities=17%  Similarity=0.314  Sum_probs=25.4

Q ss_pred             CcceEEccccCeEEEEeC---CEEEEEEcCCcc
Q psy17021         85 EVPYAMCPFQGALLVGVG---RYLRLYDLGKKK  114 (199)
Q Consensus        85 G~v~aL~~f~g~LLaavg---~~v~vy~l~~~~  114 (199)
                      ..+++++++.|.++.|||   ..|++|+++.+.
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~   98 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEE   98 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCCc
Confidence            578889999999888875   789999998764

>KOG0279|consensus

Probab=86.64  E-value=23  Score=31.55  Aligned_cols=90  Identities=16%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             EEeCCEEEEEEcCCcc-eeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEE
Q psy17021         99 VGVGRYLRLYDLGKKK-LLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC  175 (199)
Q Consensus        99 aavg~~v~vy~l~~~~-Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~  175 (199)
                      ++=..++|+||+...+ -.+-+...   .-+.++.  ..+..|+-|---+++-+.  +.-......+++|-...||+++.
T Consensus        81 ~swD~~lrlWDl~~g~~t~~f~GH~---~dVlsva~s~dn~qivSGSrDkTiklw--nt~g~ck~t~~~~~~~~WVscvr  155 (315)
T KOG0279|consen   81 ASWDGTLRLWDLATGESTRRFVGHT---KDVLSVAFSTDNRQIVSGSRDKTIKLW--NTLGVCKYTIHEDSHREWVSCVR  155 (315)
T ss_pred             ccccceEEEEEecCCcEEEEEEecC---CceEEEEecCCCceeecCCCcceeeee--eecccEEEEEecCCCcCcEEEEE
Confidence            4447899999997632 22222221   1255555  445577777766777665  44677888899998899999999


Q ss_pred             EEeC--C-eEEEEcCCCcEEE
Q psy17021        176 VLDY--N-TVASADKFGNVCI  193 (199)
Q Consensus       176 ~Ld~--~-t~l~aD~~gNl~v  193 (199)
                      |-..  + +++.+-.++-+-+
T Consensus       156 fsP~~~~p~Ivs~s~DktvKv  176 (315)
T KOG0279|consen  156 FSPNESNPIIVSASWDKTVKV  176 (315)
T ss_pred             EcCCCCCcEEEEccCCceEEE
Confidence            9944  3 5555555554433

>KOG3881|consensus

Probab=86.62  E-value=3.5  Score=37.87  Aligned_cols=99  Identities=20%  Similarity=0.203  Sum_probs=59.5

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEE-------------eeccCC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH-------------KTSVDE   85 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh-------------~~~~kG   85 (199)
                      +-.++.+.+ ..+|+||.-..   |+--..+++-..+-..+.+..-+ .-||+|+..-.+.             +..+.|
T Consensus       216 ~~~fat~T~~hqvR~YDt~~q---RRPV~~fd~~E~~is~~~l~p~g-n~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tG  291 (412)
T KOG3881|consen  216 NYKFATITRYHQVRLYDTRHQ---RRPVAQFDFLENPISSTGLTPSG-NFIYTGNTKGQLAKFDLRGGKLLGCGLKGITG  291 (412)
T ss_pred             CceEEEEecceeEEEecCccc---CcceeEeccccCcceeeeecCCC-cEEEEecccchhheecccCceeeccccCCccC
Confidence            556777777 78999996432   22111111112222234444443 5577766433322             445567


Q ss_pred             cceEEccccC-eEEEEe--CCEEEEEEcCCcceeeeeecc
Q psy17021         86 VPYAMCPFQG-ALLVGV--GRYLRLYDLGKKKLLRKCENK  122 (199)
Q Consensus        86 ~v~aL~~f~g-~LLaav--g~~v~vy~l~~~~Ll~~~~~~  122 (199)
                      ++.++.--.+ .+||..  ..-||||+....+|+-++..+
T Consensus       292 sirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvK  331 (412)
T KOG3881|consen  292 SIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVK  331 (412)
T ss_pred             CcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhh
Confidence            7777776665 677554  588999999998888777665

>KOG0305|consensus

Probab=86.54  E-value=20  Score=34.04  Aligned_cols=124  Identities=12%  Similarity=0.141  Sum_probs=81.6

Q ss_pred             eeEECCe---eeEEEeeccCCcceE--EccccCeEEEEeC----CEEEEEEcCCcceeeeeeccCcCceEEEEEEeC---
Q psy17021         68 DRLVGNA---MEFVHKTSVDEVPYA--MCPFQGALLVGVG----RYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG---  135 (199)
Q Consensus        68 ri~vgdk---lesVh~~~~kG~v~a--L~~f~g~LLaavg----~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~---  135 (199)
                      ++.+.|.   .-..++.+.+++|.|  .||++.-|||.-|    ..++.|+....+++...   ++.+.|++|.=.+   
T Consensus       324 ~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v---dtgsQVcsL~Wsk~~k  400 (484)
T KOG0305|consen  324 VVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV---DTGSQVCSLIWSKKYK  400 (484)
T ss_pred             ceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc---ccCCceeeEEEcCCCC
Confidence            3444444   456778888888877  5788877766543    45777887655544422   3667788887543   


Q ss_pred             CEE-EEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        136 HRI-YVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       136 ~~I-lVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +++ -.|....-|.+++|.. .+.+..+.-+.. | |....+= |.++++.+..++||...++-
T Consensus       401 Ei~sthG~s~n~i~lw~~ps-~~~~~~l~gH~~-R-Vl~la~SPdg~~i~t~a~DETlrfw~~f  461 (484)
T KOG0305|consen  401 ELLSTHGYSENQITLWKYPS-MKLVAELLGHTS-R-VLYLALSPDGETIVTGAADETLRFWNLF  461 (484)
T ss_pred             EEEEecCCCCCcEEEEeccc-cceeeeecCCcc-e-eEEEEECCCCCEEEEecccCcEEecccc
Confidence            333 5677888999999964 444455444433 3 5555544 45689999999999888754

>KOG0273|consensus

Probab=86.48  E-value=11  Score=35.68  Aligned_cols=109  Identities=15%  Similarity=0.132  Sum_probs=70.2

Q ss_pred             CCcceEEccc-cCeEE-EEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC-C
Q psy17021         84 DEVPYAMCPF-QGALL-VGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE-N  157 (199)
Q Consensus        84 kG~v~aL~~f-~g~LL-aav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~-~  157 (199)
                      +..|+++..= .|.+| .|. +..+++|+.....+.....++ .|  |.+|+-  .|++|+-|+.-+-..+..-..++ .
T Consensus       235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~Hk-gP--I~slKWnk~G~yilS~~vD~ttilwd~~~g~~~  311 (524)
T KOG0273|consen  235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHK-GP--IFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK  311 (524)
T ss_pred             cCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccC-Cc--eEEEEEcCCCCEEEeccCCccEEEEeccCceEE
Confidence            3445554432 25544 333 678999999877665566666 44  556664  57899999998887776542211 2


Q ss_pred             eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021        158 QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      +-.+++--.    ...++-.++++|..++.++-|+|++++++
T Consensus       312 q~f~~~s~~----~lDVdW~~~~~F~ts~td~~i~V~kv~~~  349 (524)
T KOG0273|consen  312 QQFEFHSAP----ALDVDWQSNDEFATSSTDGCIHVCKVGED  349 (524)
T ss_pred             EeeeeccCC----ccceEEecCceEeecCCCceEEEEEecCC
Confidence            222222211    23466678899999999999999998764

>KOG0299|consensus

Probab=86.38  E-value=5.5  Score=37.33  Aligned_cols=109  Identities=13%  Similarity=0.174  Sum_probs=80.7

Q ss_pred             eccCCcceEEccccC--eE-EEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCC
Q psy17021         81 TSVDEVPYAMCPFQG--AL-LVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g--~L-Laavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      .--.|+|.+++=-.|  .| .++...++.+|.+.+...+.- .| .-|..|.+|++.  +--+-||---+|+-+++. ++
T Consensus       241 ~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vet-ly-GHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi-~e  317 (479)
T KOG0299|consen  241 KGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVET-LY-GHQDGVLGIDALSRERCVTVGGRDRTVRLWKI-PE  317 (479)
T ss_pred             cccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHH-Hh-CCccceeeechhcccceEEeccccceeEEEec-cc
Confidence            345567777775555  34 466688999999987665443 33 356778888864  456678888889999997 67


Q ss_pred             CCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        156 ENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       156 ~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      +-+|+-.+-   .-.+-|++|+|++.|+.+-.+|+|....
T Consensus       318 esqlifrg~---~~sidcv~~In~~HfvsGSdnG~IaLWs  354 (479)
T KOG0299|consen  318 ESQLIFRGG---EGSIDCVAFINDEHFVSGSDNGSIALWS  354 (479)
T ss_pred             cceeeeeCC---CCCeeeEEEecccceeeccCCceEEEee
Confidence            777776654   4478899999999999999999987654

>KOG0646|consensus

Probab=86.20  E-value=1.9  Score=40.37  Aligned_cols=103  Identities=17%  Similarity=0.192  Sum_probs=72.5

Q ss_pred             eEEccccC-eEEEEeC--CEEEEEEcCCcceee-eeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEE
Q psy17021         88 YAMCPFQG-ALLVGVG--RYLRLYDLGKKKLLR-KCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLI  161 (199)
Q Consensus        88 ~aL~~f~g-~LLaavg--~~v~vy~l~~~~Ll~-~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~  161 (199)
                      -++..+++ ++++|.-  +.|.+|+|.++.... ++-   .|-.+..|..  .|.+++.|-+..++.++.... ..-|..
T Consensus        43 ~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v---~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelss-G~LL~v  118 (476)
T KOG0646|consen   43 ASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIV---LPGPVHALASSNLGYFLLAGTISGNLYLWELSS-GILLNV  118 (476)
T ss_pred             hhhhhhchhheeeecccCccccccccCchhhhhhhcc---cccceeeeecCCCceEEEeecccCcEEEEEecc-ccHHHH
Confidence            34455554 6777773  568899998875333 332   3444666665  578988888999999998753 334455


Q ss_pred             EeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEee
Q psy17021        162 FADDTQPRWITTSCVLDYN-TVASADKFGNVCIVST  196 (199)
Q Consensus       162 varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~  196 (199)
                      +.++|+  .+|++.|-|++ .++.|-++|-+++..+
T Consensus       119 ~~aHYQ--~ITcL~fs~dgs~iiTgskDg~V~vW~l  152 (476)
T KOG0646|consen  119 LSAHYQ--SITCLKFSDDGSHIITGSKDGAVLVWLL  152 (476)
T ss_pred             HHhhcc--ceeEEEEeCCCcEEEecCCCccEEEEEE
Confidence            556664  68999999666 7889999999998754

>KOG0306|consensus

Probab=85.53  E-value=23  Score=35.43  Aligned_cols=142  Identities=15%  Similarity=0.201  Sum_probs=80.9

Q ss_pred             cceeecccCCE-EEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEE
Q psy17021         12 VPYAMCPFQGA-LLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAM   90 (199)
Q Consensus        12 ~~~~~~~f~~~-ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL   90 (199)
                      .|.++.+-+-. +.+|--+++++||.--       ...  .|..-++..++              +.-...+.+..+.|+
T Consensus       458 Wsi~~~pD~~g~vT~saDktVkfWdf~l-------~~~--~~gt~~k~lsl--------------~~~rtLel~ddvL~v  514 (888)
T KOG0306|consen  458 WSISLSPDNKGFVTGSADKTVKFWDFKL-------VVS--VPGTQKKVLSL--------------KHTRTLELEDDVLCV  514 (888)
T ss_pred             eeeeecCCCCceEEecCCcEEEEEeEEE-------Eec--cCcccceeeee--------------ccceEEeccccEEEE
Confidence            34566666554 4555559999999621       111  22222222222              222234566666765


Q ss_pred             ccc-cCeEEE-Ee-CCEEEEEEcCCcce-eeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccC
Q psy17021         91 CPF-QGALLV-GV-GRYLRLYDLGKKKL-LRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDT  166 (199)
Q Consensus        91 ~~f-~g~LLa-av-g~~v~vy~l~~~~L-l~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~  166 (199)
                      ..= +|++|| |. +++|.+|-+..=++ +..-.++ .|.....|+...+.|+-|-+-++|-++..+-.+=.-..+|-|-
T Consensus       515 ~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHk-LPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdD  593 (888)
T KOG0306|consen  515 SVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHK-LPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDD  593 (888)
T ss_pred             EEcCCCcEEEEEeccCeEEEEEecceeeeeeecccc-cceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccC
Confidence            433 366654 43 99999999976542 2222222 3433444555677888888888887777665554445555544


Q ss_pred             CceeEEEEEEEeCC
Q psy17021        167 QPRWITTSCVLDYN  180 (199)
Q Consensus       167 ~~~wvta~~~Ld~~  180 (199)
                         .|++++|+..+
T Consensus       594 ---Svm~V~F~P~~  604 (888)
T KOG0306|consen  594 ---SVMSVQFLPKT  604 (888)
T ss_pred             ---ceeEEEEcccc
Confidence               67777777654

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=85.35  E-value=3.6  Score=34.94  Aligned_cols=81  Identities=21%  Similarity=0.258  Sum_probs=48.1

Q ss_pred             cCCCccee--ecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCC
Q psy17021          8 SVDEVPYA--MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDE   85 (199)
Q Consensus         8 ~~~~~~~~--~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG   85 (199)
                      |..+.|.+  =|+..|.||||.++.|.||.+-.       .+-              +  .++.=+.|=.+++.....+.
T Consensus       132 Pl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~-------~~~--------------~--~~~~~~lDFe~~l~~~~~~~  188 (215)
T PF14761_consen  132 PLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKY-------QTI--------------Q--SEKFSFLDFERSLIDHIDNF  188 (215)
T ss_pred             cCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEE-------EEE--------------e--cccccEEechhhhhheecCc
Confidence            45556654  47999999999999999998721       000              0  12221111123333444455


Q ss_pred             cceEEccccCeEEEEeCCEEEEEEcC
Q psy17021         86 VPYAMCPFQGALLVGVGRYLRLYDLG  111 (199)
Q Consensus        86 ~v~aL~~f~g~LLaavg~~v~vy~l~  111 (199)
                      .+..+.-..|++.+.-...++++++.
T Consensus       189 ~p~~v~ic~~yiA~~s~~ev~Vlkl~  214 (215)
T PF14761_consen  189 KPTQVAICEGYIAVMSDLEVLVLKLE  214 (215)
T ss_pred             eEEEEEEEeeEEEEecCCEEEEEEEe
Confidence            56666555677766667778777763

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=84.76  E-value=22  Score=31.42  Aligned_cols=96  Identities=15%  Similarity=0.041  Sum_probs=64.1

Q ss_pred             CCEEEEEEc--CCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccc----cEEEEEEeCCCCeEEEEeccC-CceeEE
Q psy17021        102 GRYLRLYDL--GKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQE----SVFLVRYKRYENQLLIFADDT-QPRWIT  172 (199)
Q Consensus       102 g~~v~vy~l--~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~----Sv~ll~y~~~~~~l~~varD~-~~~wvt  172 (199)
                      ++.|.+|++  ...+|....... ....+..|..  .++++++.+-..    +|+.++++++.++|.++.+=. ...+.+
T Consensus        12 ~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~   90 (345)
T PF10282_consen   12 GGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPC   90 (345)
T ss_dssp             STEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEE
T ss_pred             CCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcE
Confidence            467899999  444555544432 2233444444  788999998853    888888887778998888765 455555


Q ss_pred             EEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021        173 TSCVL-DYNTVASAD-KFGNVCIVSTYR  198 (199)
Q Consensus       173 a~~~L-d~~t~l~aD-~~gNl~vlr~~~  198 (199)
                      .+..- |...++++. ..|++.++++++
T Consensus        91 ~i~~~~~g~~l~vany~~g~v~v~~l~~  118 (345)
T PF10282_consen   91 HIAVDPDGRFLYVANYGGGSVSVFPLDD  118 (345)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             EEEEecCCCEEEEEEccCCeEEEEEccC
Confidence            55543 344677777 488888888765

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=84.62  E-value=31  Score=31.37  Aligned_cols=103  Identities=14%  Similarity=0.134  Sum_probs=66.5

Q ss_pred             EEEEeCCEEEEEEcCCc--c---eee-----eeeccCcCceEEEEEEeCCEEEEEecc-ccEEEEEEeCCCCeEEEEecc
Q psy17021         97 LLVGVGRYLRLYDLGKK--K---LLR-----KCENKHLPNLIVKIESMGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADD  165 (199)
Q Consensus        97 LLaavg~~v~vy~l~~~--~---Ll~-----~~~~~~~~~~i~~l~~~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD  165 (199)
                      ++.=.+++|.+|++...  +   |..     .-+..........|+..|.++.+.|=- +|++.++.++..++|..++.-
T Consensus       207 ~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~  286 (346)
T COG2706         207 LVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGIT  286 (346)
T ss_pred             EEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEe
Confidence            44455889999999652  1   222     222221122355666678899998854 499999999999998877653


Q ss_pred             -CCceeEEEEEEEeCC--eEEEEcCCCcEEEEeecCC
Q psy17021        166 -TQPRWITTSCVLDYN--TVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       166 -~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~~~  199 (199)
                       ..-+|.-...+=..+  -+....++.|+.+|+.+++
T Consensus       287 ~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         287 PTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             ccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence             233334444444333  3556678889999998875

>KOG0274|consensus

Probab=84.49  E-value=39  Score=32.38  Aligned_cols=165  Identities=15%  Similarity=0.115  Sum_probs=94.7

Q ss_pred             ecccCCEEEEeec-CeeEEEecchhhhhhh-hhhcccccCceeeeeEEEEEcCceeEE-C--Ceee---------EEEee
Q psy17021         16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRK-CENKVRIKGFRKAHQTHTHSGRSDRLV-G--NAME---------FVHKT   81 (199)
Q Consensus        16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k-~~~~~~~~~~~~~~~~~~~~~~~ri~v-g--dkle---------sVh~~   81 (199)
                      +.-..|++..|.. +.|++||...+++++- .+--  . ...   -.+....+++..+ |  |+-+         -.|..
T Consensus       214 ~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH--~-g~V---~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l  287 (537)
T KOG0274|consen  214 LQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGH--F-GGV---WGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSL  287 (537)
T ss_pred             heeecCeEEecCCCceeEEeecccceEEEeeccCC--C-CCc---eeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEe
Confidence            3334788888888 7789999999888775 3221  1 111   1111111122211 1  2222         22222


Q ss_pred             c-cCCcceEEccccCeEEEE--eCCEEEEEEcCCcceeeeee-ccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCC
Q psy17021         82 S-VDEVPYAMCPFQGALLVG--VGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        82 ~-~kG~v~aL~~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~-~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      . -.+.+.++..... ++++  -.++|++|++...+.+..-. .. .  .|..+...+++++.|-.-.+|.+..+. ...
T Consensus       288 ~gh~stv~~~~~~~~-~~~sgs~D~tVkVW~v~n~~~l~l~~~h~-~--~V~~v~~~~~~lvsgs~d~~v~VW~~~-~~~  362 (537)
T KOG0274|consen  288 QGHTSSVRCLTIDPF-LLVSGSRDNTVKVWDVTNGACLNLLRGHT-G--PVNCVQLDEPLLVSGSYDGTVKVWDPR-TGK  362 (537)
T ss_pred             cCCCceEEEEEccCc-eEeeccCCceEEEEeccCcceEEEecccc-c--cEEEEEecCCEEEEEecCceEEEEEhh-hce
Confidence            2 2234444443333 4444  57999999999776544332 32 2  366666669999999888877777665 223


Q ss_pred             eEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEE
Q psy17021        158 QLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIV  194 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vl  194 (199)
                      -+..+.-  ...||+++ .++. +.++-+-.++-|-+.
T Consensus       363 cl~sl~g--H~~~V~sl-~~~~~~~~~Sgs~D~~IkvW  397 (537)
T KOG0274|consen  363 CLKSLSG--HTGRVYSL-IVDSENRLLSGSLDTTIKVW  397 (537)
T ss_pred             eeeeecC--CcceEEEE-EecCcceEEeeeeccceEee
Confidence            3344444  78899998 4555 666666666655544

>KOG0266|consensus

Probab=84.36  E-value=17  Score=33.62  Aligned_cols=106  Identities=14%  Similarity=0.134  Sum_probs=69.1

Q ss_pred             cceEEcccc-CeEEE--EeCCEEEEEEcCCc-ceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         86 VPYAMCPFQ-GALLV--GVGRYLRLYDLGKK-KLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        86 ~v~aL~~f~-g~LLa--avg~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      .|+.++-.. |+.++  +...++++|+..+. ..++.- . +...++.++.  ..+++|+-|+.-.+|.+.....  ++.
T Consensus       205 ~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l-~-gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~--~~~  280 (456)
T KOG0266|consen  205 GVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTL-K-GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT--GEC  280 (456)
T ss_pred             ceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEe-c-CCCCceEEEEecCCCCEEEEecCCCcEEEEeccC--CeE
Confidence            444444333 44443  34789999999443 333322 2 2334555555  4689999999999999987654  555


Q ss_pred             EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        160 LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ...-..+.. .|+++.|= |...++.++.++++.++-+
T Consensus       281 ~~~l~~hs~-~is~~~f~~d~~~l~s~s~d~~i~vwd~  317 (456)
T KOG0266|consen  281 VRKLKGHSD-GISGLAFSPDGNLLVSASYDGTIRVWDL  317 (456)
T ss_pred             EEeeeccCC-ceEEEEECCCCCEEEEcCCCccEEEEEC
Confidence            554455544 78888887 5557888888999988753

>KOG0650|consensus

Probab=84.12  E-value=2.3  Score=41.15  Aligned_cols=34  Identities=32%  Similarity=0.520  Sum_probs=30.4

Q ss_pred             eecccCCEEEEeecCeeEEEecchhhhhhhhhhc
Q psy17021         15 AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK   48 (199)
Q Consensus        15 ~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~   48 (199)
                      .+.+++-.|+|+.-+.+|+|||-|..|.||..+-
T Consensus       573 ~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg  606 (733)
T KOG0650|consen  573 KFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTG  606 (733)
T ss_pred             EecCCCceEEEEeccceEEEehhHHHHHHHHhcC
Confidence            4678888999999999999999999999998765

>KOG2110|consensus

Probab=83.80  E-value=35  Score=31.32  Aligned_cols=136  Identities=19%  Similarity=0.227  Sum_probs=83.4

Q ss_pred             eeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEE--------------EcCceeEECCeeeEEE
Q psy17021         14 YAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTH--------------SGRSDRLVGNAMEFVH   79 (199)
Q Consensus        14 ~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~--------------~~~~ri~vgdklesVh   79 (199)
                      .+..==+.||+|..-..+-+||+--=+||.--++-   |+.++....+..              .|.=.++....++.+.
T Consensus        91 L~VrmNr~RLvV~Lee~IyIydI~~MklLhTI~t~---~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~  167 (391)
T KOG2110|consen   91 LAVRMNRKRLVVCLEESIYIYDIKDMKLLHTIETT---PPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVN  167 (391)
T ss_pred             EEEEEccceEEEEEcccEEEEecccceeehhhhcc---CCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeee
Confidence            33333468999999999999999888888754443   233332222221              1111335566777776


Q ss_pred             eecc-CCcceEEccc--cCeEEEEe---CCEEEEEEcCCcceeeeeeccCc-CceEEEEEE--eCCEEEEEeccccEEEE
Q psy17021         80 KTSV-DEVPYAMCPF--QGALLVGV---GRYLRLYDLGKKKLLRKCENKHL-PNLIVKIES--MGHRIYVSDVQESVFLV  150 (199)
Q Consensus        80 ~~~~-kG~v~aL~~f--~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~-~~~i~~l~~--~~~~IlVGD~~~Sv~ll  150 (199)
                      ..+. +|++-|+ .|  +|.+||..   |.-+|||...+.+++.. +-+++ +.-|.+|.-  ...++.+.---+.|+++
T Consensus       168 ~I~aH~~~lAal-afs~~G~llATASeKGTVIRVf~v~~G~kl~e-FRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiF  245 (391)
T KOG2110|consen  168 TINAHKGPLAAL-AFSPDGTLLATASEKGTVIRVFSVPEGQKLYE-FRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIF  245 (391)
T ss_pred             EEEecCCceeEE-EECCCCCEEEEeccCceEEEEEEcCCccEeee-eeCCceeeEEEEEEECCCCCeEEEecCCCeEEEE
Confidence            6654 4444443 34  58888766   56689999987765442 22221 222444443  35688888888899999


Q ss_pred             EEeC
Q psy17021        151 RYKR  154 (199)
Q Consensus       151 ~y~~  154 (199)
                      +-+.
T Consensus       246 KL~~  249 (391)
T KOG2110|consen  246 KLEK  249 (391)
T ss_pred             Eecc
Confidence            8853

>KOG2048|consensus

Probab=83.78  E-value=15  Score=36.02  Aligned_cols=119  Identities=11%  Similarity=0.134  Sum_probs=73.0

Q ss_pred             EEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCc-----eEEEEEEeCCEEEEEeccccEEEEE
Q psy17021         77 FVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPN-----LIVKIESMGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        77 sVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~-----~i~~l~~~~~~IlVGD~~~Sv~ll~  151 (199)
                      .....+-+-.+-|++|....+..+.-+.+++|++.-..++++--.++.+.     ...+.+..+|.+++.- .....+..
T Consensus       377 l~~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s-~~~~~le~  455 (691)
T KOG2048|consen  377 LFTKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVS-KNIFSLEE  455 (691)
T ss_pred             eecCCccceeeeccCCCCCEEEEeeccceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEe-cccceeEE
Confidence            33333445577889998888889999999999997544444433332222     2333444566554443 45566666


Q ss_pred             EeCCCCeEEEE---eccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        152 YKRYENQLLIF---ADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       152 y~~~~~~l~~v---arD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      |+.+..++.++   ..-..---++.+... |.+.+.+++.+|+|+++.+
T Consensus       456 ~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl  504 (691)
T KOG2048|consen  456 FELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNL  504 (691)
T ss_pred             EEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEc
Confidence            66555544443   333222344555555 5567888999999999975

>KOG0647|consensus

Probab=83.63  E-value=33  Score=30.87  Aligned_cols=173  Identities=15%  Similarity=0.197  Sum_probs=106.0

Q ss_pred             eecccCCEEE-Eeec-CeeEEEecchh-hhhhhhhhcccccCceeeeeEEEEEcCceeEECC--ee---------eEEEe
Q psy17021         15 AMCPFQGALL-VGVG-RYLRLYDLGKK-KLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN--AM---------EFVHK   80 (199)
Q Consensus        15 ~~~~f~~~ll-~~~~-~~l~~y~~g~k-~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd--kl---------esVh~   80 (199)
                      ++.+=.+-++ +|.= +++|+|++-.- ++.-|+....  +. +-.=+.+...| +.++.|.  +.         +....
T Consensus        34 ~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~--~~-PvL~v~Wsddg-skVf~g~~Dk~~k~wDL~S~Q~~~v  109 (347)
T KOG0647|consen   34 AFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSH--DG-PVLDVCWSDDG-SKVFSGGCDKQAKLWDLASGQVSQV  109 (347)
T ss_pred             EeccccCceEEecccCCceEEEEEecCCcccchhhhcc--CC-CeEEEEEccCC-ceEEeeccCCceEEEEccCCCeeee
Confidence            4445333444 5443 89999999874 6777888774  22 21133444443 5666653  21         22333


Q ss_pred             eccCCcceEEccccCeE--EEEe---CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021         81 TSVDEVPYAMCPFQGAL--LVGV---GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~L--Laav---g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      ---++++.++.-+.|..  +.+.   .++|+.||....+.+  .... .|--+-.+++...+.+||-.-+++.++..+..
T Consensus       110 ~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv--~t~~-LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~  186 (347)
T KOG0647|consen  110 AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPV--ATLQ-LPERVYAADVLYPMAVVATAERHIAVYNLENP  186 (347)
T ss_pred             eecccceeEEEEecCCCcceeEecccccceeecccCCCCee--eeee-ccceeeehhccCceeEEEecCCcEEEEEcCCC
Confidence            45678899988888875  3333   478999998766543  3332 56667777888999999999999999887544


Q ss_pred             CCeEEEEeccCC-ceeEE-EEEE-EeCCeEEEEcCCCcEEEEeec
Q psy17021        156 ENQLLIFADDTQ-PRWIT-TSCV-LDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       156 ~~~l~~varD~~-~~wvt-a~~~-Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...+   -|--. -.|.+ |+.. -|.+.++.+--+|-..+..++
T Consensus       187 ~te~---k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id  228 (347)
T KOG0647|consen  187 PTEF---KRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYID  228 (347)
T ss_pred             cchh---hhhcCcccceeeEEEEEecCCceEeeeecceEEEEecC
Confidence            3332   22222 23444 3332 377777777777776665544

>KOG0647|consensus

Probab=83.46  E-value=11  Score=33.93  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=57.2

Q ss_pred             eEEccccCeEEEEe--CCEEEEEEcCCc-ceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEe
Q psy17021         88 YAMCPFQGALLVGV--GRYLRLYDLGKK-KLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFA  163 (199)
Q Consensus        88 ~aL~~f~g~LLaav--g~~v~vy~l~~~-~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~va  163 (199)
                      .+|.|..+.+++|-  .++||+|++... ++..|+... +.|..-+.-.-.|+.++.|+.-+++.++-.  +.+|...+|
T Consensus        33 l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL--~S~Q~~~v~  110 (347)
T KOG0647|consen   33 LAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL--ASGQVSQVA  110 (347)
T ss_pred             eEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc--cCCCeeeee
Confidence            45677666666444  699999999874 677777664 223333333445789999999999988754  677888888


Q ss_pred             ccCCce
Q psy17021        164 DDTQPR  169 (199)
Q Consensus       164 rD~~~~  169 (199)
                      -+-.|.
T Consensus       111 ~Hd~pv  116 (347)
T KOG0647|consen  111 AHDAPV  116 (347)
T ss_pred             ecccce
Confidence            877663

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=83.32  E-value=27  Score=32.06  Aligned_cols=99  Identities=13%  Similarity=0.089  Sum_probs=45.9

Q ss_pred             eeecccCCEEEEeec-CeeEEEecchhhhhh-hhhhcc-cc-------cCceeeeeEEEEEcCceeEEC--CeeeEEEee
Q psy17021         14 YAMCPFQGALLVGVG-RYLRLYDLGKKKLLR-KCENKV-RI-------KGFRKAHQTHTHSGRSDRLVG--NAMEFVHKT   81 (199)
Q Consensus        14 ~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~-k~~~~~-~~-------~~~~~~~~~~~~~~~~ri~vg--dklesVh~~   81 (199)
                      ..|++..+-|+||+. +.+.||-.|+.|-=- +-+... ++       .+....++.    ..+|.--+  +.+......
T Consensus         7 vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d----i~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    7 VSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTD----ISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             EEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-----GGG--TT-SEEEEEEEEE
T ss_pred             EEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEE----ehhhCCcccccccCchhhe
Confidence            357788899999999 889999999965432 111110 00       000111111    11232111  123333333


Q ss_pred             cc-CCcceEEcccc-CeEEEEe-CCEEEEEEcCCccee
Q psy17021         82 SV-DEVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLL  116 (199)
Q Consensus        82 ~~-kG~v~aL~~f~-g~LLaav-g~~v~vy~l~~~~Ll  116 (199)
                      +. .|+|+|++-=+ |.+.+|- +.+|.+.|+-...++
T Consensus        83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI  120 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVI  120 (395)
T ss_dssp             ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEE
T ss_pred             eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEE
Confidence            22 58888876533 6666665 567777777555443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG0310|consensus

Probab=82.17  E-value=46  Score=31.49  Aligned_cols=172  Identities=18%  Similarity=0.182  Sum_probs=82.7

Q ss_pred             CcceeecccC--CEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-C-C-----------
Q psy17021         11 EVPYAMCPFQ--GALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-G-N-----------   73 (199)
Q Consensus        11 ~~~~~~~~f~--~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-g-d-----------   73 (199)
                      +.+++ ..|+  ||||++-+  +.+++||+--|-.||--..- ..|-    +++.+...++-+++ | |           
T Consensus        69 ~~v~s-~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah-~apv----~~~~f~~~d~t~l~s~sDd~v~k~~d~s~  142 (487)
T KOG0310|consen   69 DVVYS-VDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAH-QAPV----HVTKFSPQDNTMLVSGSDDKVVKYWDLST  142 (487)
T ss_pred             cceeE-EEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhc-cCce----eEEEecccCCeEEEecCCCceEEEEEcCC
Confidence            34444 5677  99998877  77999997666677733222 1121    22332222233322 1 1           


Q ss_pred             eeeEEEeeccCCcce--EEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeC--CEEEEEeccccE
Q psy17021         74 AMEFVHKTSVDEVPY--AMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG--HRIYVSDVQESV  147 (199)
Q Consensus        74 klesVh~~~~kG~v~--aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~--~~IlVGD~~~Sv  147 (199)
                      .-......--+..|.  ++.|.++.+++.-  ..+|++|+..... -+..++. ....|-++-...  .+| +.=-=.||
T Consensus       143 a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~eln-hg~pVe~vl~lpsgs~i-asAgGn~v  219 (487)
T KOG0310|consen  143 AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELN-HGCPVESVLALPSGSLI-ASAGGNSV  219 (487)
T ss_pred             cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-ceeEEec-CCCceeeEEEcCCCCEE-EEcCCCeE
Confidence            111222222233333  4677788777655  4899999996553 2333443 122233333321  222 11111222


Q ss_pred             EEEEEeCC-CCeE-EEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEe
Q psy17021        148 FLVRYKRY-ENQL-LIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVS  195 (199)
Q Consensus       148 ~ll~y~~~-~~~l-~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr  195 (199)
                      -++  +-. .+++ ...+.  ..--|||..+-.+ ...+.+--++++-+|.
T Consensus       220 kVW--Dl~~G~qll~~~~~--H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd  266 (487)
T KOG0310|consen  220 KVW--DLTTGGQLLTSMFN--HNKTVTCLRLASDSTRLLSGSLDRHVKVFD  266 (487)
T ss_pred             EEE--EecCCceehhhhhc--ccceEEEEEeecCCceEeecccccceEEEE
Confidence            222  212 1221 11111  3445666666633 3466666666666665

>KOG1036|consensus

Probab=81.73  E-value=25  Score=31.56  Aligned_cols=131  Identities=18%  Similarity=0.217  Sum_probs=71.4

Q ss_pred             ecCCCcceeecccCCEEEEe-ecCeeEEEecchhhhhh-hhhhcccccCceeeeeEEEE--------EcCceeEEC---C
Q psy17021          7 TSVDEVPYAMCPFQGALLVG-VGRYLRLYDLGKKKLLR-KCENKVRIKGFRKAHQTHTH--------SGRSDRLVG---N   73 (199)
Q Consensus         7 t~~~~~~~~~~~f~~~ll~~-~~~~l~~y~~g~k~ll~-k~~~~~~~~~~~~~~~~~~~--------~~~~ri~vg---d   73 (199)
                      +.....+++|.-=.++|+|| .+..+.+|||-+=..-- +-|...   .+.+.-+.+..        ...+|++|.   +
T Consensus       132 ~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~l---kyqtR~v~~~pn~eGy~~sSieGRVavE~~d~  208 (323)
T KOG1036|consen  132 FDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSL---KYQTRCVALVPNGEGYVVSSIEGRVAVEYFDD  208 (323)
T ss_pred             cccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccc---eeEEEEEEEecCCCceEEEeecceEEEEccCC
Confidence            34456789999999999995 55889999974311110 111111   12222223222        224788763   2


Q ss_pred             e-----ee---EEEeeccCC-----cceE--EccccCeEE-EEeCCEEEEEEcCCcc-eeeeeeccCcCceEEEEE--Ee
Q psy17021         74 A-----ME---FVHKTSVDE-----VPYA--MCPFQGALL-VGVGRYLRLYDLGKKK-LLRKCENKHLPNLIVKIE--SM  134 (199)
Q Consensus        74 k-----le---sVh~~~~kG-----~v~a--L~~f~g~LL-aavg~~v~vy~l~~~~-Ll~~~~~~~~~~~i~~l~--~~  134 (199)
                      .     .+   -.|-..-+|     ||++  |.|..|.+. +|-...|-+|++..++ |-.-+.+   ...|.+|.  ..
T Consensus       209 s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~---~~SI~slsfs~d  285 (323)
T KOG1036|consen  209 SEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY---ETSISSLSFSMD  285 (323)
T ss_pred             chHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC---CCceEEEEeccC
Confidence            2     11   123222222     4444  567777776 3445788899998765 4333333   23344444  45


Q ss_pred             CCEEEEEec
Q psy17021        135 GHRIYVSDV  143 (199)
Q Consensus       135 ~~~IlVGD~  143 (199)
                      |..+++|+.
T Consensus       286 G~~LAia~s  294 (323)
T KOG1036|consen  286 GSLLAIASS  294 (323)
T ss_pred             CCeEEEEec
Confidence            778888764

>KOG0772|consensus

Probab=81.67  E-value=9.3  Score=36.60  Aligned_cols=141  Identities=15%  Similarity=0.252  Sum_probs=77.1

Q ss_pred             EEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEcccc--CeEE-
Q psy17021         22 ALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPFQ--GALL-   98 (199)
Q Consensus        22 ~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f~--g~LL-   98 (199)
                      .|-++--.+||+||..+-|    ++.+         ++.....++.|+-+       +          -|.|+  |+++ 
T Consensus       284 FlT~s~DgtlRiWdv~~~k----~q~q---------Vik~k~~~g~Rv~~-------t----------sC~~nrdg~~iA  333 (641)
T KOG0772|consen  284 FLTCSYDGTLRIWDVNNTK----SQLQ---------VIKTKPAGGKRVPV-------T----------SCAWNRDGKLIA  333 (641)
T ss_pred             eEEecCCCcEEEEecCCch----hhee---------EEeeccCCCcccCc-------e----------eeecCCCcchhh
Confidence            4566667899999986622    2222         22333333444322       1          24453  5554 


Q ss_pred             EEe-CCEEEEEEcCCcc-----eeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021         99 VGV-GRYLRLYDLGKKK-----LLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRW  170 (199)
Q Consensus        99 aav-g~~v~vy~l~~~~-----Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~w  170 (199)
                      ||+ +.++.+|+.++..     .+++|-..  ..-|++|.  ..|++++---.-.|+-++-.+.-..-|.....=..+--
T Consensus       334 agc~DGSIQ~W~~~~~~v~p~~~vk~AH~~--g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~  411 (641)
T KOG0772|consen  334 AGCLDGSIQIWDKGSRTVRPVMKVKDAHLP--GQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFP  411 (641)
T ss_pred             hcccCCceeeeecCCcccccceEeeeccCC--CCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCC
Confidence            444 7899999986532     44455443  23466666  34666665555556666655443444444333344555


Q ss_pred             EEEEEEEeCCeEEE-------EcCCCcEEEE
Q psy17021        171 ITTSCVLDYNTVAS-------ADKFGNVCIV  194 (199)
Q Consensus       171 vta~~~Ld~~t~l~-------aD~~gNl~vl  194 (199)
                      .|.|.|--++.+|.       ++..|+|++|
T Consensus       412 ~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~  442 (641)
T KOG0772|consen  412 GTDCCFSPDDKLILTGTSAPNGMTAGTLFFF  442 (641)
T ss_pred             CCccccCCCceEEEecccccCCCCCceEEEE
Confidence            67777765554333       3566777766

>KOG0289|consensus

Probab=81.48  E-value=48  Score=31.23  Aligned_cols=97  Identities=12%  Similarity=0.078  Sum_probs=58.6

Q ss_pred             cCe-EEEEeCCE-EEEEEcCCcceeeeeeccCc-CceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeE---EEEeccCC
Q psy17021         94 QGA-LLVGVGRY-LRLYDLGKKKLLRKCENKHL-PNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQL---LIFADDTQ  167 (199)
Q Consensus        94 ~g~-LLaavg~~-v~vy~l~~~~Ll~~~~~~~~-~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l---~~varD~~  167 (199)
                      ||+ |+.+.+.. |++||+.+-+..+.-...+. .....+++-.|.++.+|  -.++.++.|+....+-   .+++..- 
T Consensus       400 NGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~--g~~l~Vy~~~k~~k~W~~~~~~~~~s-  476 (506)
T KOG0289|consen  400 NGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA--GSDLQVYICKKKTKSWTEIKELADHS-  476 (506)
T ss_pred             CceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee--cceeEEEEEecccccceeeehhhhcc-
Confidence            675 55666655 99999987665554444321 23355566678888888  7889999987555433   3333322 


Q ss_pred             ceeEEEEEEEeCCeEEEEc-CCCcEEEE
Q psy17021        168 PRWITTSCVLDYNTVASAD-KFGNVCIV  194 (199)
Q Consensus       168 ~~wvta~~~Ld~~t~l~aD-~~gNl~vl  194 (199)
                       .-.|++.|=+...++++- .+.++-++
T Consensus       477 -g~st~v~Fg~~aq~l~s~smd~~l~~~  503 (506)
T KOG0289|consen  477 -GLSTGVRFGEHAQYLASTSMDAILRLY  503 (506)
T ss_pred             -cccceeeecccceEEeeccchhheEEe
Confidence             356777776666666543 33344333

>KOG2055|consensus

Probab=81.46  E-value=15  Score=34.60  Aligned_cols=96  Identities=20%  Similarity=0.273  Sum_probs=61.3

Q ss_pred             EEEEeCCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEEEEeCCCCeEEEEeccCCce--eE
Q psy17021         97 LLVGVGRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRYENQLLIFADDTQPR--WI  171 (199)
Q Consensus        97 LLaavg~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~--wv  171 (199)
                      |+||.+++|++|.+..+.  ++.-..+..+|.....+...|. +|+.+--  .=.++.|+-+..++..+.+=+..-  .+
T Consensus       229 lvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~r--rky~ysyDle~ak~~k~~~~~g~e~~~~  306 (514)
T KOG2055|consen  229 LVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGR--RKYLYSYDLETAKVTKLKPPYGVEEKSM  306 (514)
T ss_pred             EEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEeccc--ceEEEEeeccccccccccCCCCcccchh
Confidence            568999999999996542  4444444456666666666776 6666543  345778888887777776655432  34


Q ss_pred             EEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021        172 TTSCVL-DYNTVASADKFGNVCIV  194 (199)
Q Consensus       172 ta~~~L-d~~t~l~aD~~gNl~vl  194 (199)
                      -..|.- |...++-+=.+|-|.++
T Consensus       307 e~FeVShd~~fia~~G~~G~I~lL  330 (514)
T KOG2055|consen  307 ERFEVSHDSNFIAIAGNNGHIHLL  330 (514)
T ss_pred             heeEecCCCCeEEEcccCceEEee
Confidence            344433 44456666677777665

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=81.24  E-value=30  Score=33.78  Aligned_cols=121  Identities=20%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             CEEEEeecCeeEEEecc-----hhhhhh--hhhhcccccCcee--------eeeEEEEEcCceeEE---CCeeeEEEeec
Q psy17021         21 GALLVGVGRYLRLYDLG-----KKKLLR--KCENKVRIKGFRK--------AHQTHTHSGRSDRLV---GNAMEFVHKTS   82 (199)
Q Consensus        21 ~~ll~~~~~~l~~y~~g-----~k~ll~--k~~~~~~~~~~~~--------~~~~~~~~~~~ri~v---gdklesVh~~~   82 (199)
                      -.|.|--++.+-+|-|+     +.|+|-  -||.+-.+|--++        .|.+..+-.+--|+-   .|.-.-..-.+
T Consensus        74 aLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~  153 (671)
T PF15390_consen   74 ALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK  153 (671)
T ss_pred             ceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc
Confidence            34556667889999876     556665  5666432322221        122211111000100   11111111235


Q ss_pred             cCCcceEEccccC--eEEEEeCCEEEEEEcCCc--ceeeeeecc--CcCceEEEEEEeCC-EEEEE
Q psy17021         83 VDEVPYAMCPFQG--ALLVGVGRYLRLYDLGKK--KLLRKCENK--HLPNLIVKIESMGH-RIYVS  141 (199)
Q Consensus        83 ~kG~v~aL~~f~g--~LLaavg~~v~vy~l~~~--~Ll~~~~~~--~~~~~i~~l~~~~~-~IlVG  141 (199)
                      -.|-+.|=|.-.+  ||++|+|+.|+-|-|.+.  .|.+-+++.  +...||.++.+..| .++|+
T Consensus       154 ~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~dsqVAva  219 (671)
T PF15390_consen  154 TSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVDSQVAVA  219 (671)
T ss_pred             CCceEEEEEecCcCCEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEeccceEEEE
Confidence            5566666666653  899999999999999753  354433322  34568888886543 55443

>KOG0282|consensus

Probab=80.93  E-value=17  Score=34.40  Aligned_cols=161  Identities=15%  Similarity=0.210  Sum_probs=85.1

Q ss_pred             EEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee-EECCeee-EEEee--------ccC---Ccce
Q psy17021         22 ALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR-LVGNAME-FVHKT--------SVD---EVPY   88 (199)
Q Consensus        22 ~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri-~vgdkle-sVh~~--------~~k---G~v~   88 (199)
                      .|=+|.-+.|+|||.-.-|-+-+-++.- .|.    .+.. +..+..+ ++|-.-. .+|.-        +|+   |+++
T Consensus       273 fLS~sfD~~lKlwDtETG~~~~~f~~~~-~~~----cvkf-~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~  346 (503)
T KOG0282|consen  273 FLSASFDRFLKLWDTETGQVLSRFHLDK-VPT----CVKF-HPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAIL  346 (503)
T ss_pred             eeeeecceeeeeeccccceEEEEEecCC-Cce----eeec-CCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhhee
Confidence            3566777999999976655554444431 333    2222 2222344 3332211 11111        222   6666


Q ss_pred             EEcccc--CeEEEEe-CCEEEEEEcCCcceeeeeeccCcCce-EEEEE---------EeCCEEEEEeccccEEEEEEeCC
Q psy17021         89 AMCPFQ--GALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNL-IVKIE---------SMGHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        89 aL~~f~--g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~-i~~l~---------~~~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      .+.=+.  -+.+-+. .+++++|+++..-.++--.....+++ .+.+.         +.+|+|++    -| +..+|+. 
T Consensus       347 ~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~i----fs-~~~~~r~-  420 (503)
T KOG0282|consen  347 DITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAI----FS-TVPPFRL-  420 (503)
T ss_pred             eeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEE----Ee-ccccccc-
Confidence            655443  3555444 68999999986533332222112222 22333         34555544    11 2233432 


Q ss_pred             CCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021        156 ENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS  195 (199)
Q Consensus       156 ~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr  195 (199)
                       +.-..+.....+-..+.++|= |.++++.+|.+|+++++-
T Consensus       421 -nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wd  460 (503)
T KOG0282|consen  421 -NKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWD  460 (503)
T ss_pred             -CHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEee
Confidence             222334456666677778876 778999999999999863

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=80.84  E-value=27  Score=28.02  Aligned_cols=97  Identities=21%  Similarity=0.126  Sum_probs=59.2

Q ss_pred             cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCce----------EEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021         94 QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNL----------IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        94 ~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~----------i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v  162 (199)
                      .+.++++. +..|+.++....+++-+-... .+..          ...+...++.+++++--..  ++.++...++.. -
T Consensus       122 ~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~--~~~~d~~tg~~~-w  197 (238)
T PF13360_consen  122 GDRLYVGTSSGKLVALDPKTGKLLWKYPVG-EPRGSSPISSFSDINGSPVISDGRVYVSSGDGR--VVAVDLATGEKL-W  197 (238)
T ss_dssp             TTEEEEEETCSEEEEEETTTTEEEEEEESS-TT-SS--EEEETTEEEEEECCTTEEEEECCTSS--EEEEETTTTEEE-E
T ss_pred             cCEEEEEeccCcEEEEecCCCcEEEEeecC-CCCCCcceeeecccccceEEECCEEEEEcCCCe--EEEEECCCCCEE-E
Confidence            56788887 899999999877765544443 2221          1233334568888876665  344465666533 3


Q ss_pred             eccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        163 ADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       163 arD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      .++...  ..+.-..+++.+++++.+++++.+..
T Consensus       198 ~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~d~  229 (238)
T PF13360_consen  198 SKPISG--IYSLPSVDGGTLYVTSSDGRLYALDL  229 (238)
T ss_dssp             EECSS---ECECEECCCTEEEEEETTTEEEEEET
T ss_pred             EecCCC--ccCCceeeCCEEEEEeCCCEEEEEEC
Confidence            344222  33333457778888889999998764

...

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=80.14  E-value=6.7  Score=38.86  Aligned_cols=62  Identities=18%  Similarity=0.223  Sum_probs=50.5

Q ss_pred             CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC-------eEEEEcCCCcEEEEee
Q psy17021        135 GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN-------TVASADKFGNVCIVST  196 (199)
Q Consensus       135 ~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~-------t~l~aD~~gNl~vlr~  196 (199)
                      ..+|+|||=-.+|+++-|...+.+..........--+-++.|+|++       .++++|-.||+++++.
T Consensus       177 ~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  177 SRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            5799999999999999998766555554444466677899999766       5788999999999886

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	199
3ei1_A	1158	Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Pho		3e-08
4a0a_A	1159	Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Dup		3e-08
4a08_A	1159	Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Dup		3e-08
4a0b_A	1159	Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Dup		3e-08
3e0c_A	1140	Crystal Structure Of Dna Damage-Binding Protein 1(D		3e-08
4e54_A	1150	Damaged Dna Induced Uv-Damaged Dna-Binding Protein		3e-08
4a11_A	1159	Structure Of The Hsddb1-Hscsa Complex Length = 1159		3e-08
4a0l_A	1144	Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp		3e-08
3ei4_A	1158	Structure Of The Hsddb1-Hsddb2 Complex Length = 115		9e-08
3i7h_A	1143	Crystal Structure Of Ddb1 In Complex With The H-Box		9e-08
2b5l_A	1140	Crystal Structure Of Ddb1 In Complex With Simian Vi		9e-08

>pdb|3EI1|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 14 Bp 6-4 Photoproduct Containing Dna-Duplex Length = 1158

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 934
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 994

>pdb|4A0A|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex ( Pyrimidine At D-1 Position) At 3.6 A Resolution (Cpd 3) Length = 1159

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995

>pdb|4A08|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 13 Bp Cpd-Duplex ( Purine At D-1 Position) At 3.0 A Resolution (Cpd 1) Length = 1159

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995

>pdb|4A0B|A Chain A, Structure Of Hsddb1-Drddb2 Bound To A 16 Bp Cpd-Duplex ( Pyrimidine At D-1 Position) At 3.8 A Resolution (Cpd 4) Length = 1159

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995

>pdb|3E0C|A Chain A, Crystal Structure Of Dna Damage-Binding Protein 1(Ddb1) Length = 1140

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976

>pdb|4E54|A Chain A, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 1150

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 868 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 926
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 927 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 986

>pdb|4A11|A Chain A, Structure Of The Hsddb1-Hscsa Complex Length = 1159

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 877 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 935
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 936 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 995

>pdb|4A0L|A Chain A, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic Site Containing Dna-Duplex Length = 1144

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR  E  H  N++ + +++
Sbjct: 862 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKT 920
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 921 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 980

>pdb|3EI4|A Chain A, Structure Of The Hsddb1-Hsddb2 Complex Length = 1158

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K +R  E  H  N++ + +++
Sbjct: 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 934
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 994

>pdb|3I7H|A Chain A, Crystal Structure Of Ddb1 In Complex With The H-Box Motif Of Hbx Length = 1143

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K +R  E  H  N++ + +++
Sbjct: 861 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 919
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 920 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 979

>pdb|2B5L|A Chain A, Crystal Structure Of Ddb1 In Complex With Simian Virus 5 V Protein Length = 1140

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 75  MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI-VKIES 133
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K +R  E  H  N++ + +++
Sbjct: 858 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKDVR-TECNHYNNIMALYLKT 916
Query: 134 MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI 193
            G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+   N+ +
Sbjct: 917 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFV 976

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	199
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	2e-36
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	4e-11

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... Length = 1158

 Score =  133 bits (336), Expect = 2e-36
 Identities = 33/127 (25%), Positives = 57/127 (44%)

Query: 69  RLVGNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLI 128
           +     ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR   N +   + 
Sbjct: 870 QYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMA 929

Query: 129 VKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF 188
           + +++ G  I V D+  SV L+ YK  E      A D  P W++   +LD +    A+  
Sbjct: 930 LYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENA 989

Query: 189 GNVCIVS 195
            N+ +  
Sbjct: 990 FNLFVCQ 996

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... Length = 1158

 Score = 60.4 bits (145), Expect = 4e-11
 Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 1   MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQT 60
           ++ V +  V    Y+M  F G LL  +   +RLY+   +K LR   N             
Sbjct: 876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNH------YNNIMA 929

Query: 61  HTHSGRSDR-LVGNAMEFVHKTSVDEVPYAMCPF 93
                + D  LVG+ M  V   +   +       
Sbjct: 930 LYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	199
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.96
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	99.55
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	97.87
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	97.74
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	97.7
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	97.64
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	97.56
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	97.48
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	97.4
3jrp_A	379	Fusion protein of protein transport protein SEC13	97.39
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.37
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	97.37
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	97.34
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	97.33
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	97.33
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	97.32
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	97.31
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	97.3
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	97.26
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	97.24
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	97.18
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	97.15
3jrp_A	379	Fusion protein of protein transport protein SEC13	97.14
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	97.05
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	97.04
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.03
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	97.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	96.99
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.98
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	96.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	96.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	96.92
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	96.91
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	96.91
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.91
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	96.9
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.88
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	96.87
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.86
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	96.81
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	96.81
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	96.8
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	96.79
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.77
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	96.77
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	96.72
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	96.66
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	96.61
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	96.59
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	96.58
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	96.58
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	96.58
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	96.57
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.57
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	96.53
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.48
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	96.47
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	96.43
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	96.38
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	96.28
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	96.27
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	96.27
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	96.26
2pm7_B	297	Protein transport protein SEC13, protein transport	96.23
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	96.23
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	96.2
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	96.2
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	96.18
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	96.16
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	96.12
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	96.09
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	96.04
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	95.98
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	95.97
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	95.97
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	95.89
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	95.88
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	95.86
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	95.81
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	95.78
3jro_A	753	Fusion protein of protein transport protein SEC13	95.78
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	95.7
3jro_A	753	Fusion protein of protein transport protein SEC13	95.66
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	95.66
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	95.62
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	95.61
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	95.6
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	95.5
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	95.47
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	95.45
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	95.41
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	95.4
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	95.39
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	95.38
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	95.34
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	95.25
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	95.23
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	95.14
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	95.03
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	95.02
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	95.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	94.89
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	94.87
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	94.79
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	94.74
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	94.67
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	94.45
2pm7_B	297	Protein transport protein SEC13, protein transport	94.43
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	94.4
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	94.38
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	94.35
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	94.32
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	94.13
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	93.98
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	93.97
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	93.69
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	93.69
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	93.68
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	93.54
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	93.47
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	93.43
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	93.39
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	93.06
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	93.04
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	93.0
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	92.77
3v9f_A	781	Two-component system sensor histidine kinase/RESP	92.61
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	92.6
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	92.55
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	92.4
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	92.36
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	91.63
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	91.55
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	91.55
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	91.46
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	91.2
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	91.1
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	90.96
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	90.95
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	90.44
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	90.38
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	89.73
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	89.39
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	89.26
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	88.98
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	88.74
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	87.94
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	87.66
4a2l_A	795	BT_4663, two-component system sensor histidine kin	87.38
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	87.32
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	86.71
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	86.57
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	86.5
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	85.78
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	85.34
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	85.3
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	85.28
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	84.91
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	83.53
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	83.52
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	83.13
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	82.74
2p4o_A	306	Hypothetical protein; putative lactonase, structur	82.2
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	81.64
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	81.14
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	81.01
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	80.82
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	80.47

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.96  E-value=2.2e-28  Score=244.36  Aligned_cols=127  Identities=27%  Similarity=0.445  Sum_probs=116.6

Q ss_pred             CCeeeEEEeeccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCc-CceEEEEEEeCCEEEEEeccccEEEE
Q psy17021         72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHL-PNLIVKIESMGHRIYVSDVQESVFLV  150 (199)
Q Consensus        72 gdklesVh~~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~-~~~i~~l~~~~~~IlVGD~~~Sv~ll  150 (199)
                      +.+++.+|.++++|+|+|+++|+|+||||+|++|++|+|+++++++ ++...+ +..++++++.+|+|+|||+|+||+|+
T Consensus       873 ~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~  951 (1158)
T 3ei3_A          873 DGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKGDFILVGDLMRSVLLL  951 (1158)
T ss_dssp             TTEEEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEETTEEEEEESSBCEEEE
T ss_pred             CCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccCCEEEEEEhhheEEEE
Confidence            5699999999999999999999999999999999999999887666 333212 23477999999999999999999999


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      +|++++++|+++|||+.|+|+||+++||++++++||++|||+++|+||+
T Consensus       952 ~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A          952 AYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp             EEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTT
T ss_pred             EEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCC
Confidence            9999999999999999999999999999999999999999999999985

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=99.55  E-value=1e-13  Score=138.76  Aligned_cols=163  Identities=18%  Similarity=0.211  Sum_probs=118.2

Q ss_pred             CceeEEecCCCcceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEe
Q psy17021          1 MEFVHKTSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHK   80 (199)
Q Consensus         1 l~~~h~t~~~~~~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~   80 (199)
                      |+++|+|+++++|+|+++|+||||||+|+.+++||+|+|++|| ++++. .|. +  ++....+.++||++||.++|+++
T Consensus       876 L~lv~~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~-~~~-i--~~~~l~~~~~~I~vgD~~~Sv~~  950 (1158)
T 3ei3_A          876 LQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNH-YNN-I--MALYLKTKGDFILVGDLMRSVLL  950 (1158)
T ss_dssp             EEEEEEEEESSCEEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEE-CCC-S--CEEEEEEETTEEEEEESSBCEEE
T ss_pred             EEEEEEEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeec-ccc-E--EEEEEeccCCEEEEEEhhheEEE
Confidence            5899999999999999999999999999999999999999999 77763 443 2  22233344699999999999999


Q ss_pred             eccCCcceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCC---
Q psy17021         81 TSVDEVPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYE---  156 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~---  156 (199)
                      ..|+..                         ..+|...|.-. .+..+++... ..+.+++||....+.+++|+++.   
T Consensus       951 ~~y~~~-------------------------~~~L~~~a~D~-~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~ 1004 (1158)
T 3ei3_A          951 LAYKPM-------------------------EGNFEEIARDF-NPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTD 1004 (1158)
T ss_dssp             EEEETT-------------------------TTEEEEEEECC-SCBCEEEEEEEETTEEEEEETTSEEEEEEECTTCCST
T ss_pred             EEEEcC-------------------------CCeEEEEEeec-ccccEEEEEEEccCcEEEEcCCCcEEEEecCCCCCCc
Confidence            876643                         23343334332 3556666665 36899999999999999998742   


Q ss_pred             ---CeEEEEeccCCceeEEEEEE--Ee-----------CCeEEEEcCCCcEEEE
Q psy17021        157 ---NQLLIFADDTQPRWITTSCV--LD-----------YNTVASADKFGNVCIV  194 (199)
Q Consensus       157 ---~~l~~varD~~~~wvta~~~--Ld-----------~~t~l~aD~~gNl~vl  194 (199)
                         .+|...|.=+..--+++...  |.           .+.++.+=.+|.|.++
T Consensus      1005 ~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A         1005 EERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp             TGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred             cccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence               46666654444444555542  11           1246777778887766

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=97.87  E-value=0.0017  Score=56.11  Aligned_cols=175  Identities=13%  Similarity=0.148  Sum_probs=108.5

Q ss_pred             CcceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeEE
Q psy17021         11 EVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEFV   78 (199)
Q Consensus        11 ~~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------lesV   78 (199)
                      ..+.++..-.+.+++|.. +.+++||+...+.++.-...   ...+    .-..+.+..+++|..           .+.+
T Consensus       200 ~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~v----~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  272 (445)
T 2ovr_B          200 STVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH---VAAV----RCVQYDGRRVVSGAYDFMVKVWDPETETCL  272 (445)
T ss_dssp             SCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECC---SSCE----EEEEECSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred             CcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCC---cccE----EEEEECCCEEEEEcCCCEEEEEECCCCcEe
Confidence            344555555566666654 78999999876655432211   1222    223334555655421           1222


Q ss_pred             Eee-ccCCcceEEccccCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021         79 HKT-SVDEVPYAMCPFQGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        79 h~~-~~kG~v~aL~~f~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      ... ...++++++.. +|. +++| ..+++++|++...+.+.....  ....+..+...++++++|..-..+.++..+. 
T Consensus       273 ~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-  348 (445)
T 2ovr_B          273 HTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELKDNILVSGNADSTVKIWDIKT-  348 (445)
T ss_dssp             EEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEETTEEEEEETTSCEEEEETTT-
T ss_pred             EEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcC--CcccEEEEEEeCCEEEEEeCCCeEEEEECCC-
Confidence            222 24567888776 664 4443 368999999987765443222  2345778888899999999888888876532 


Q ss_pred             CCeEEEEec-cCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        156 ENQLLIFAD-DTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       156 ~~~l~~var-D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...+..+.. ......++++.+ +.+.++.+..+|.+.++...
T Consensus       349 ~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~v~iwd~~  390 (445)
T 2ovr_B          349 GQCLQTLQGPNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLK  390 (445)
T ss_dssp             CCEEEEECSTTSCSSCEEEEEE-CSSEEEEEETTSEEEEEETT
T ss_pred             CcEEEEEccCCCCCCCEEEEEE-CCCEEEEEeCCCeEEEEECC
Confidence            233344432 235667888887 77889999999999998654

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=97.74  E-value=0.0095  Score=51.39  Aligned_cols=176  Identities=9%  Similarity=0.047  Sum_probs=104.7

Q ss_pred             CCcceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeE
Q psy17021         10 DEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEF   77 (199)
Q Consensus        10 ~~~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------les   77 (199)
                      ...+.++..-...+++|.. +.+++||+...+.++.-...   ...   + .-..+.++.+++|..           .+.
T Consensus       133 ~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h---~~~---v-~~l~~~~~~l~sg~~dg~i~vwd~~~~~~  205 (435)
T 1p22_A          133 SKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGH---TGS---V-LCLQYDERVIITGSSDSTVRVWDVNTGEM  205 (435)
T ss_dssp             CCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCC---SSC---E-EEEECCSSEEEEEETTSCEEEEESSSCCE
T ss_pred             CCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC---CCc---E-EEEEECCCEEEEEcCCCeEEEEECCCCcE
Confidence            3456777665556666554 78999998776554432211   122   2 223334455555321           111


Q ss_pred             EE-eeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceee-eeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021         78 VH-KTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLR-KCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        78 Vh-~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~-~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ++ ...-.+++.++..-.+.+++|- .++|++|++...+... ..........+.++...++++++|..-..+.++..  
T Consensus       206 ~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~--  283 (435)
T 1p22_A          206 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT--  283 (435)
T ss_dssp             EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET--
T ss_pred             EEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC--
Confidence            21 2234567777765445555443 6899999997654322 11222123357788888999999998888877653  


Q ss_pred             CCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        155 YENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ..++....-. .....++++.+ +.+.++.+..+|.+.++..
T Consensus       284 ~~~~~~~~~~-~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~  323 (435)
T 1p22_A          284 STCEFVRTLN-GHKRGIACLQY-RDRLVVSGSSDNTIRLWDI  323 (435)
T ss_dssp             TTCCEEEEEE-CCSSCEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred             CcCcEEEEEc-CCCCcEEEEEe-CCCEEEEEeCCCeEEEEEC
Confidence            3333322222 23456777777 7888999999999988764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=97.70  E-value=0.0029  Score=54.58  Aligned_cols=180  Identities=10%  Similarity=0.084  Sum_probs=105.5

Q ss_pred             CcceeecccCCE-EEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-----------eeE
Q psy17021         11 EVPYAMCPFQGA-LLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-----------MEF   77 (199)
Q Consensus        11 ~~~~~~~~f~~~-ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-----------les   77 (199)
                      ..+.++.. .|. +++|.. +.+++||+...+.++.-...   +..   + .-..+.+..+++|..           .+.
T Consensus       240 ~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~---v-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  311 (445)
T 2ovr_B          240 AAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGH---TNR---V-YSLQFDGIHVVSGSLDTSIRVWDVETGNC  311 (445)
T ss_dssp             SCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCC---SSC---E-EEEEECSSEEEEEETTSCEEEEETTTCCE
T ss_pred             ccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCC---CCc---e-EEEEECCCEEEEEeCCCeEEEEECCCCCE
Confidence            34445444 554 444443 78999998776665543221   122   2 223334455555421           122


Q ss_pred             EE-eeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021         78 VH-KTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        78 Vh-~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      +. .....+.+.++.+-.+.+++|- +++|++|++...+.+..-... .....+.++...++++++|..-..|.++....
T Consensus       312 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~  391 (445)
T 2ovr_B          312 IHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT  391 (445)
T ss_dssp             EEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred             EEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence            22 2233456667665444555444 688999999776654433221 12345888888899999999888888876543


Q ss_pred             CCCeEEEE---eccCCceeEEEEEEEeCC-eEEEEcCCCc----EEEEeecCC
Q psy17021        155 YENQLLIF---ADDTQPRWITTSCVLDYN-TVASADKFGN----VCIVSTYRE  199 (199)
Q Consensus       155 ~~~~l~~v---arD~~~~wvta~~~Ld~~-t~l~aD~~gN----l~vlr~~~~  199 (199)
                       ...+..+   ........++++.+-.+. .++.+..+|+    ++++...+|
T Consensus       392 -~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          392 -GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             -CCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             -CceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence             2233333   223455678888886554 4577788887    888876653

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=97.64  E-value=0.0066  Score=52.37  Aligned_cols=171  Identities=8%  Similarity=0.084  Sum_probs=104.7

Q ss_pred             CcceeecccCCEE-EEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe--------------
Q psy17021         11 EVPYAMCPFQGAL-LVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA--------------   74 (199)
Q Consensus        11 ~~~~~~~~f~~~l-l~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk--------------   74 (199)
                      ..+.++.. .|.+ ++|-. +.+++||+...+.++.-...   ..    .+.-..+.++.+++|..              
T Consensus       174 ~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h---~~----~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~  245 (435)
T 1p22_A          174 GSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIHH---CE----AVLHLRFNNGMMVTCSKDRSIAVWDMASPTD  245 (435)
T ss_dssp             SCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECCC---CS----CEEEEECCTTEEEEEETTSCEEEEECSSSSC
T ss_pred             CcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC---CC----cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCC
Confidence            34566655 5554 44443 78999999776655432211   11    12223333444544321              


Q ss_pred             eeE-EEeeccCCcceEEccccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021         75 MEF-VHKTSVDEVPYAMCPFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        75 les-Vh~~~~kG~v~aL~~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~  151 (199)
                      ... -......++++++.. +|. +++|- .++|++|++...+.+.....  ....+.++...++++++|..-..|.++.
T Consensus       246 ~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~g~~dg~i~iwd  322 (435)
T 1p22_A          246 ITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQYRDRLVVSGSSDNTIRLWD  322 (435)
T ss_dssp             CEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred             ceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEeCCCEEEEEeCCCeEEEEE
Confidence            111 222344567888776 554 44443 68999999987765544322  2234777777899999999888888876


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ... ...+..+.  .....++++.+ |.+.++.+..+|.+.++.+
T Consensus       323 ~~~-~~~~~~~~--~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~  363 (435)
T 1p22_A          323 IEC-GACLRVLE--GHEELVRCIRF-DNKRIVSGAYDGKIKVWDL  363 (435)
T ss_dssp             TTT-CCEEEEEC--CCSSCEEEEEC-CSSEEEEEETTSCEEEEEH
T ss_pred             CCC-CCEEEEEe--CCcCcEEEEEe-cCCEEEEEeCCCcEEEEEC
Confidence            532 22333332  24567888888 8889999999999998864

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=97.56  E-value=0.018  Score=46.01  Aligned_cols=107  Identities=8%  Similarity=0.125  Sum_probs=72.2

Q ss_pred             ccCCcceEEccccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021         82 SVDEVPYAMCPFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        82 ~~kG~v~aL~~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ...+++.++.. ++. +++|- ++.+++|+.  .+........  ...+.++..   .++++++|..-..+.++.    .
T Consensus       102 ~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d----~  172 (313)
T 3odt_A          102 GHQGNVCSLSF-QDGVVISGSWDKTAKVWKE--GSLVYNLQAH--NASVWDAKVVSFSENKFLTASADKTIKLWQ----N  172 (313)
T ss_dssp             CCSSCEEEEEE-ETTEEEEEETTSEEEEEET--TEEEEEEECC--SSCEEEEEEEETTTTEEEEEETTSCEEEEE----T
T ss_pred             hcccCEEEEEe-cCCEEEEEeCCCCEEEEcC--CcEEEecccC--CCceeEEEEccCCCCEEEEEECCCCEEEEe----c
Confidence            35567788776 554 44333 689999992  2222222211  223444443   588999999988888875    3


Q ss_pred             CeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        157 NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      .+....-.......++++.+..++.++.+..++.+.++...
T Consensus       173 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~  213 (313)
T 3odt_A          173 DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH  213 (313)
T ss_dssp             TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred             CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC
Confidence            44445555557778999999988889999999999988654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=97.48  E-value=0.041  Score=47.26  Aligned_cols=173  Identities=10%  Similarity=0.014  Sum_probs=95.6

Q ss_pred             cceeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECC-----------eeeEE
Q psy17021         12 VPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFV   78 (199)
Q Consensus        12 ~~~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesV   78 (199)
                      .+.++.+-...+++|.. +.+++||+...+.++.-...   ...+   ....-. .+..+++|.           .-+.+
T Consensus       272 ~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~v---~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  345 (464)
T 3v7d_B          272 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH---TDRI---YSTIYDHERKRCISASMDTTIRIWDLENGELM  345 (464)
T ss_dssp             CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred             eEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CCCE---EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence            34455555566776664 78999999876665432211   1112   122111 122333321           12222


Q ss_pred             Eee-ccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCC
Q psy17021         79 HKT-SVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        79 h~~-~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ... .-.+++.++..-.+.|++|- .++|++|++...+........ ....+..+...++++++|. -..+.+  |+...
T Consensus       346 ~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-dg~i~i--wd~~~  421 (464)
T 3v7d_B          346 YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHT-NLSAITTFYVSDNILVSGS-ENQFNI--YNLRS  421 (464)
T ss_dssp             EEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECT-TCCCEEEEEECSSEEEEEE-TTEEEE--EETTT
T ss_pred             EEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCC-CCccEEEEEeCCCEEEEec-CCeEEE--EECCC
Confidence            222 34567777664333455443 679999999876543333332 3455777888899999998 445544  45556


Q ss_pred             CeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEe
Q psy17021        157 NQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVS  195 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr  195 (199)
                      +++...-.-.....++++.+ +++ .+++++.+|..++.-
T Consensus       422 g~~~~~~~~~~~~~v~~v~~-~~~~l~~~~~~~g~~~i~~  460 (464)
T 3v7d_B          422 GKLVHANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEI  460 (464)
T ss_dssp             CCEEESCTTTTCSEEEEEEE-ETTEEEEEEEETTEEEEEE
T ss_pred             CcEEehhhccCCCcEEEEEe-cCCEEEEEEEeCCeEEEEE
Confidence            66554212233567888888 455 455556666555443

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=97.40  E-value=0.0091  Score=50.67  Aligned_cols=111  Identities=9%  Similarity=0.012  Sum_probs=71.0

Q ss_pred             cCCcceEEc--cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCC
Q psy17021         83 VDEVPYAMC--PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        83 ~kG~v~aL~--~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      .++.++++.  |-.+.++|+  ...+|++|++...+.++.-..  ....+.++...  + .+++.|..-.+|.++  +.+
T Consensus       225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~lasgs~D~~i~iw--d~~  300 (357)
T 4g56_B          225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV--HSQNITGLAYSYHSSPFLASISEDCTVAVL--DAD  300 (357)
T ss_dssp             CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--CSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTT
T ss_pred             ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec--cceeEEEEEEcCCCCCEEEEEeCCCEEEEE--ECC
Confidence            345566654  445666543  357899999987765443222  12346777653  3 467778766677665  555


Q ss_pred             CCeEEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEeecCC
Q psy17021        156 ENQLLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       156 ~~~l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      .+++...-  -...+|++++|=  |...++.+-.+|.+.+..+|.+
T Consensus       301 ~~~~~~~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          301 FSEVFRDL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             SCEEEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             CCcEeEEC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            55554432  345689999984  5667888889999999988753

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=97.39  E-value=0.04  Score=45.08  Aligned_cols=118  Identities=4%  Similarity=-0.011  Sum_probs=74.7

Q ss_pred             eeccCCcceEEcccc--------------CeEE-EEe-CCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CC
Q psy17021         80 KTSVDEVPYAMCPFQ--------------GALL-VGV-GRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GH  136 (199)
Q Consensus        80 ~~~~kG~v~aL~~f~--------------g~LL-aav-g~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~  136 (199)
                      .....++++++.--.              +..+ +|- ...|++|++...+  .............+.++.-.     ++
T Consensus       143 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~  222 (379)
T 3jrp_A          143 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS  222 (379)
T ss_dssp             EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred             ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC
Confidence            334456666665443              5544 333 6789999995432  11112222122346666654     67


Q ss_pred             EEEEEeccccEEEEEEeCCCC--eEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021        137 RIYVSDVQESVFLVRYKRYEN--QLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       137 ~IlVGD~~~Sv~ll~y~~~~~--~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~~  197 (199)
                      +++.|+.-..+.++..+....  ..........+..++++.+-.+ ..++.+..+|.+.++++.
T Consensus       223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~  286 (379)
T 3jrp_A          223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  286 (379)
T ss_dssp             EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred             eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence            899999999999988765432  3344444446778899988744 467777889999999875

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.37  E-value=0.031  Score=45.42  Aligned_cols=118  Identities=8%  Similarity=0.022  Sum_probs=78.6

Q ss_pred             eEEEeeccCCcceEEcc---ccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEE
Q psy17021         76 EFVHKTSVDEVPYAMCP---FQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLV  150 (199)
Q Consensus        76 esVh~~~~kG~v~aL~~---f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll  150 (199)
                      +.+.....+++++++.-   -+|.++++.  .+.|++|++...+.+.....   +..+..+....+.++++..-.++.++
T Consensus       119 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~  195 (368)
T 3mmy_A          119 QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL---PERCYCADVIYPMAVVATAERGLIVY  195 (368)
T ss_dssp             EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC---SSCEEEEEEETTEEEEEEGGGCEEEE
T ss_pred             CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec---CCCceEEEecCCeeEEEeCCCcEEEE
Confidence            34445567788888873   355544333  68999999987765444332   34577778889999999999999988


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeC-C----eEEEEcCCCcEEEEeec
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDY-N----TVASADKFGNVCIVSTY  197 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~-~----t~l~aD~~gNl~vlr~~  197 (199)
                      ..+.....+..+. ........++.+... .    .++.+..+|.+.++.+.
T Consensus       196 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~  246 (368)
T 3mmy_A          196 QLENQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN  246 (368)
T ss_dssp             ECSSSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred             Eeccccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence            8765444444333 333444555555532 2    28999999998888654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=97.37  E-value=0.02  Score=46.75  Aligned_cols=115  Identities=5%  Similarity=-0.007  Sum_probs=71.3

Q ss_pred             cCCcceEEccccCeEEEE-eCCEEEEEEcCCcce--------------eeeeeccCcCceEEEEEEe--CCEEEEEeccc
Q psy17021         83 VDEVPYAMCPFQGALLVG-VGRYLRLYDLGKKKL--------------LRKCENKHLPNLIVKIESM--GHRIYVSDVQE  145 (199)
Q Consensus        83 ~kG~v~aL~~f~g~LLaa-vg~~v~vy~l~~~~L--------------l~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~  145 (199)
                      ..+++.++.--.+.++++ ..+.+++|++...+.              +..-...............  ++++++|+.-.
T Consensus       230 ~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg  309 (366)
T 3k26_A          230 HRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG  309 (366)
T ss_dssp             CSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred             CcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence            556677766443344433 368999999965421              1111111111222333445  78999999888


Q ss_pred             cEEEEEEeCCC---CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        146 SVFLVRYKRYE---NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       146 Sv~ll~y~~~~---~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +|.++..+..+   .....+..+.....++++.+- |...++.+..+|.+.++.+.
T Consensus       310 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          310 KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            99888775432   234445444446789999988 45578889999999988753

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=97.34  E-value=0.028  Score=44.85  Aligned_cols=111  Identities=14%  Similarity=0.101  Sum_probs=74.0

Q ss_pred             cCCcceEEcccc-CeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeC-CEEEEEeccccEEEEEEeCCCCeE
Q psy17021         83 VDEVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMG-HRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        83 ~kG~v~aL~~f~-g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~-~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      .++++.++.--. +.++++- ++.+++|++...+.+..-..  ....+.++.... +++++|..-..|.++..  ..++.
T Consensus       183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~--~~~~~  258 (313)
T 3odt_A          183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNGDIVSCGEDRTVRIWSK--ENGSL  258 (313)
T ss_dssp             CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSCEEEEETTSEEEEECT--TTCCE
T ss_pred             CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCCCEEEEecCCEEEEEEC--CCCce
Confidence            667777776554 4655444 67999999987765544322  223477777643 37888888778777654  34443


Q ss_pred             EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021        160 LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       160 ~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~  198 (199)
                      ...-.. ....++++.+-.++.++.+..+|.+.++.+..
T Consensus       259 ~~~~~~-~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~  296 (313)
T 3odt_A          259 KQVITL-PAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK  296 (313)
T ss_dssp             EEEEEC-SSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred             eEEEec-cCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence            333322 23468888888777799999999999997653

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=97.33  E-value=0.01  Score=52.33  Aligned_cols=114  Identities=11%  Similarity=0.036  Sum_probs=76.5

Q ss_pred             cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE------------eCCEEEEEeccccE
Q psy17021         83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES------------MGHRIYVSDVQESV  147 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~------------~~~~IlVGD~~~Sv  147 (199)
                      ..++++++.-- +|+.|+..  ..+|++|++...+++...... ....+.++..            .+.++++|+.-..|
T Consensus       487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i  565 (615)
T 1pgu_A          487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI  565 (615)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred             ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence            35566665432 45554433  578999999877765542210 1223666664            67899999999999


Q ss_pred             EEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecCC
Q psy17021        148 FLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYRE  199 (199)
Q Consensus       148 ~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~~  199 (199)
                      .++..+.....+..+  ......++++.+..++.++.+..+|.+.+++++.|
T Consensus       566 ~iw~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~  615 (615)
T 1pgu_A          566 FIYSVKRPMKIIKAL--NAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE  615 (615)
T ss_dssp             EEEESSCTTCCEEET--TSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred             EEEECCCCceechhh--hcCccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence            998875433334333  22367899999997766888999999999998764

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=97.33  E-value=0.014  Score=48.63  Aligned_cols=170  Identities=12%  Similarity=0.042  Sum_probs=98.4

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEECC-----------eeeEEEe-eccCC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFVHK-TSVDE   85 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesVh~-~~~kG   85 (199)
                      .+++++|.. +.+++||+...+.+++-...   ...+   ..+.-. .+..++++.           ..+.+.. ....+
T Consensus       217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~---~~~i---~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  290 (425)
T 1r5m_A          217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGH---HGPI---SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ  290 (425)
T ss_dssp             TTEEEEECGGGCEEEEETTCSSCSEEECCC---SSCE---EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred             CCEEEEEcCCCeEEEEEcCCCceeeeeccC---CCce---EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence            456666655 78999999876665443211   1212   122111 122333321           1111111 22456


Q ss_pred             cceEEcccc-CeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC----
Q psy17021         86 VPYAMCPFQ-GALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN----  157 (199)
Q Consensus        86 ~v~aL~~f~-g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~----  157 (199)
                      ++.++.--. |.++++ -.+.+++|++...+.+......  ...+.++..  .++++++|..-..+.++..+....    
T Consensus       291 ~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~  368 (425)
T 1r5m_A          291 SIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVD--GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS  368 (425)
T ss_dssp             CEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECT--TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----
T ss_pred             cEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccC--CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee
Confidence            677765543 355443 3689999999877654443322  234555554  478999999888898887754320    


Q ss_pred             --------------eEEEEeccCCce-eEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021        158 --------------QLLIFADDTQPR-WITTSCVLDY-NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 --------------~l~~varD~~~~-wvta~~~Ld~-~t~l~aD~~gNl~vlr~~  197 (199)
                                    .....-+..... .++++.+-.+ ..++.+..+|.+.++.++
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          369 LYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             ----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             eecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence                          033333333333 8999999844 467789999999998875

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=97.32  E-value=0.018  Score=46.39  Aligned_cols=166  Identities=9%  Similarity=0.098  Sum_probs=97.7

Q ss_pred             ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEeeccC
Q psy17021         18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHKTSVD   84 (199)
Q Consensus        18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~~~~k   84 (199)
                      +-...+++|-. +.+++||+...+.++.....   ...+   ..+.-. .+..++++           +..+.+.....+
T Consensus       151 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~---~~~i---~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~  224 (337)
T 1gxr_A          151 PDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH---TDGA---SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT  224 (337)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred             CCCCEEEEEeCCCcEEEEeCCCCceeeeeecc---cCce---EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC
Confidence            33345555544 78999999876665533221   1112   111111 22233332           223445555677


Q ss_pred             CcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         85 EVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        85 G~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      +++.++.-- +| .++++- ++++++|++...+.......   ...+.++...  ++++++|..-..+.++..  ..++.
T Consensus       225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~--~~~~~  299 (337)
T 1gxr_A          225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH---ESCVLSLKFAYCGKWFVSTGKDNLLNAWRT--PYGAS  299 (337)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEET--TTCCE
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCC---ccceeEEEECCCCCEEEEecCCCcEEEEEC--CCCeE
Confidence            777776533 24 454444 68899999987765432222   2346666654  778999988777777654  33333


Q ss_pred             EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        160 LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ...  ......++++.+- |...++.+..+|++.++++
T Consensus       300 ~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          300 IFQ--SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEE--EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEE--ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            322  2245678888887 4457888899999999875

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=97.31  E-value=0.025  Score=46.04  Aligned_cols=116  Identities=13%  Similarity=0.057  Sum_probs=76.2

Q ss_pred             eccCCcceEEccccCeEEEEe-CCEEEEEEcCC-cce-eeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021         81 TSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGK-KKL-LRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        81 ~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~-~~L-l~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ...++.++++..-.+.++++- +++|++|++.. .+. ....... ....+.++..   .++++++|..-..+.++.|+.
T Consensus       147 ~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~  225 (342)
T 1yfq_A          147 TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD  225 (342)
T ss_dssp             SSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred             EeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence            345677888776666666554 56999999976 331 1111121 2234666665   468999999988999988876


Q ss_pred             C-----CCeEEEEeccCC-------ceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        155 Y-----ENQLLIFADDTQ-------PRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       155 ~-----~~~l~~varD~~-------~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .     ......+.....       ..+++++.+- |...++.+..+|.+.++.+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~  281 (342)
T 1yfq_A          226 QGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ  281 (342)
T ss_dssp             TCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred             CCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence            5     233333333222       3488888887 45578888999999988654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=97.30  E-value=0.035  Score=47.70  Aligned_cols=109  Identities=10%  Similarity=0.040  Sum_probs=70.9

Q ss_pred             cCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         83 VDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        83 ~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      ..+++.++.+-...+++|- +++|++|++...+.+..-..  ....+.++..  .++++++|..-.++.++..  ..++.
T Consensus       269 ~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~--~~~~~  344 (464)
T 3v7d_B          269 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG--HTDRIYSTIYDHERKRCISASMDTTIRIWDL--ENGEL  344 (464)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEET--TTTEE
T ss_pred             ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCcE
Confidence            3456677755445565554 68999999987665443221  1233555554  4679999998888877654  34444


Q ss_pred             EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        160 LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       160 ~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...-. .....++++.+ +++.++.+..+|++.++...
T Consensus       345 ~~~~~-~h~~~v~~~~~-~~~~l~s~s~dg~v~vwd~~  380 (464)
T 3v7d_B          345 MYTLQ-GHTALVGLLRL-SDKFLVSAAADGSIRGWDAN  380 (464)
T ss_dssp             EEEEC-CCSSCEEEEEE-CSSEEEEEETTSEEEEEETT
T ss_pred             EEEEe-CCCCcEEEEEE-cCCEEEEEeCCCcEEEEECC
Confidence            33322 24556777776 57789999999999988653

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=97.26  E-value=0.046  Score=43.93  Aligned_cols=108  Identities=13%  Similarity=0.074  Sum_probs=71.5

Q ss_pred             cCCcceEEccc-cC-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMCPF-QG-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~~f-~g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..+++.++.-- +| .|+++ -.+.+++|++...+.+......   ..+.++..  .++++++|..-..+.++..+  ..
T Consensus       182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~--~~  256 (337)
T 1gxr_A          182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVN--KP  256 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETT--SS
T ss_pred             ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC---CceEEEEECCCCCEEEEEcCCCcEEEEECC--CC
Confidence            45667765443 34 44443 3679999999877665544332   33555554  57799999988888776553  34


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ....+  ......++++.+- |...++.+..+|.+.++.++
T Consensus       257 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~  295 (337)
T 1gxr_A          257 DKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             CEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CeEEE--cCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence            44333  2345678888887 44568888889999988764

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=97.24  E-value=0.017  Score=47.13  Aligned_cols=119  Identities=8%  Similarity=0.022  Sum_probs=74.5

Q ss_pred             EEEeeccCCcceEEccc----cCe-EEEEe-CCEEEEEEcCCcceeeeee---ccCcCceEEEEEEeC--C-EEEEEecc
Q psy17021         77 FVHKTSVDEVPYAMCPF----QGA-LLVGV-GRYLRLYDLGKKKLLRKCE---NKHLPNLIVKIESMG--H-RIYVSDVQ  144 (199)
Q Consensus        77 sVh~~~~kG~v~aL~~f----~g~-LLaav-g~~v~vy~l~~~~Ll~~~~---~~~~~~~i~~l~~~~--~-~IlVGD~~  144 (199)
                      .......+++++++.--    ++. +++|- ++.|++|++...+......   .......+.++....  . +++.|..-
T Consensus       202 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  281 (357)
T 3i2n_A          202 LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA  281 (357)
T ss_dssp             EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred             eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC
Confidence            34455667788876644    444 44443 6899999997554322211   111223466776543  3 78999988


Q ss_pred             ccEEEEEEeCCCCe------------------EEEEeccCCceeEEEEEEEeCC-eEE-EEcCCCcEEEEeec
Q psy17021        145 ESVFLVRYKRYENQ------------------LLIFADDTQPRWITTSCVLDYN-TVA-SADKFGNVCIVSTY  197 (199)
Q Consensus       145 ~Sv~ll~y~~~~~~------------------l~~varD~~~~wvta~~~Ld~~-t~l-~aD~~gNl~vlr~~  197 (199)
                      ..+.++..+.....                  +..+.  ....+++++.+-.++ .++ .+..++.+.++.+.
T Consensus       282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~  352 (357)
T 3i2n_A          282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT  352 (357)
T ss_dssp             SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             CcEEEeecCCCcccccccCCCCccccccccceeeccc--cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence            89999988743321                  22222  235678888887544 565 58889999998764

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=97.18  E-value=0.013  Score=47.85  Aligned_cols=173  Identities=12%  Similarity=0.071  Sum_probs=95.1

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEEeeccCCcc
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVHKTSVDEVP   87 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh~~~~kG~v   87 (199)
                      ...|++|.. +.+++||+...+.++.....    ..++.+.-.....+..++.+.           ..+.+......+.+
T Consensus        98 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  173 (368)
T 3mmy_A           98 GSKVFTASCDKTAKMWDLSSNQAIQIAQHD----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERC  173 (368)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEEECS----SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCE
T ss_pred             CCEEEEEcCCCcEEEEEcCCCCceeecccc----CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCc
Confidence            335555553 78999999887766532222    222211110011222344331           22333444555677


Q ss_pred             eEEccccCeEE-EEeCCEEEEEEcCCccee-eeee-ccCcCceEEEEEEeCCE----EEEEeccccEEEEEEeCCCC--e
Q psy17021         88 YAMCPFQGALL-VGVGRYLRLYDLGKKKLL-RKCE-NKHLPNLIVKIESMGHR----IYVSDVQESVFLVRYKRYEN--Q  158 (199)
Q Consensus        88 ~aL~~f~g~LL-aavg~~v~vy~l~~~~Ll-~~~~-~~~~~~~i~~l~~~~~~----IlVGD~~~Sv~ll~y~~~~~--~  158 (199)
                      .++......++ ++-++.+.+|++...... .... .......+..+......    +++|..-.++.++.++....  .
T Consensus       174 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~  253 (368)
T 3mmy_A          174 YCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD  253 (368)
T ss_dssp             EEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred             eEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence            77777777655 445788999999754311 1111 11122234444443333    88999888888887754421  1


Q ss_pred             EEEEeccCCc-----------eeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        159 LLIFADDTQP-----------RWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       159 l~~varD~~~-----------~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...+ +.+..           .+++++.+- |...++.+..+|.|.++.+.
T Consensus       254 ~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~  303 (368)
T 3mmy_A          254 NFTF-KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD  303 (368)
T ss_dssp             SEEE-ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred             ceee-eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence            1111 11111           168888887 44578899999999988754

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=97.15  E-value=0.072  Score=43.27  Aligned_cols=109  Identities=11%  Similarity=0.124  Sum_probs=71.3

Q ss_pred             cceEEc-----cccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE-----eCCEEEEEeccccEEEEEEe
Q psy17021         86 VPYAMC-----PFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-----MGHRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        86 ~v~aL~-----~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-----~~~~IlVGD~~~Sv~ll~y~  153 (199)
                      .++++.     .-++. +++|- .+.|++|++...+........   ..+.++..     .++++++|..-..+.++...
T Consensus       166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  242 (357)
T 3i2n_A          166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK---NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR  242 (357)
T ss_dssp             CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred             ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC---CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence            566554     12454 44443 479999999887764443332   34666664     46899999988889888765


Q ss_pred             CCC--CeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeec
Q psy17021        154 RYE--NQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTY  197 (199)
Q Consensus       154 ~~~--~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~  197 (199)
                      ...  ..+....-.....+++++.+-.++  .++.+..+|.+.++.+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~  290 (357)
T 3i2n_A          243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE  290 (357)
T ss_dssp             EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred             CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence            432  333322223456788999888554  48888999999988764

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=97.14  E-value=0.076  Score=43.38  Aligned_cols=115  Identities=9%  Similarity=0.033  Sum_probs=74.4

Q ss_pred             cCCcceEEcccc---Ce-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEEe
Q psy17021         83 VDEVPYAMCPFQ---GA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVSD  142 (199)
Q Consensus        83 ~kG~v~aL~~f~---g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVGD  142 (199)
                      ..++++++.--.   |. ++++ -..+|++|++...+.............+.++...               ++++++|.
T Consensus       100 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  179 (379)
T 3jrp_A          100 HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG  179 (379)
T ss_dssp             CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE
T ss_pred             CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence            456777765432   43 4433 3689999999765322222222123346666543               67999999


Q ss_pred             ccccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021        143 VQESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       143 ~~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~  197 (199)
                      .-..+.++...........+. -.....+++++.+-.+    ..++.+..+|.+.++.+.
T Consensus       180 ~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~  239 (379)
T 3jrp_A          180 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD  239 (379)
T ss_dssp             TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence            999999998876555443332 2234567889988854    578889999999988764

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=97.05  E-value=0.025  Score=47.61  Aligned_cols=172  Identities=8%  Similarity=0.018  Sum_probs=95.9

Q ss_pred             eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEEe-e
Q psy17021         15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVHK-T   81 (199)
Q Consensus        15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh~-~   81 (199)
                      ++.+-..+|++|.. +.+++||+...+..+.-+..    . +. ........+..+++|.           ..+.... .
T Consensus        63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  136 (420)
T 3vl1_A           63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA----D-YT-AVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ  136 (420)
T ss_dssp             EEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC----C-EE-EEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred             eeeecCCeEEEEEcCCcEEEEEecccceeeEEecC----C-ce-EEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence            45555666766654 78999999876655432222    1 10 0111112223344321           1222333 2


Q ss_pred             ccCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021         82 SVDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ...+++++++-- +|+ |++|- .++|++|++...+.+..-.-  ....+.++..  .+++++.|..-.++.++..  ..
T Consensus       137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~--~~  212 (420)
T 3vl1_A          137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG--HRATVTDIAIIDRGRNVLSASLDGTIRLWEC--GT  212 (420)
T ss_dssp             SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC--CSSCEEEEEEETTTTEEEEEETTSCEEEEET--TT
T ss_pred             cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC--CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC--CC
Confidence            556778876644 344 44333 58999999987654433221  1234666665  4678999998888877754  33


Q ss_pred             CeEE-EEec-cCCceeEEEEEEE----------------------eCCeEEEEcCCCcEEEEee
Q psy17021        157 NQLL-IFAD-DTQPRWITTSCVL----------------------DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~-~var-D~~~~wvta~~~L----------------------d~~t~l~aD~~gNl~vlr~  196 (199)
                      ++.. .+.. ......+.++.+.                      |...++.+..+|.+.++.+
T Consensus       213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~  276 (420)
T 3vl1_A          213 GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV  276 (420)
T ss_dssp             TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred             CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence            3332 2221 1234556666653                      2336888889999988754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=97.04  E-value=0.04  Score=48.50  Aligned_cols=118  Identities=15%  Similarity=0.083  Sum_probs=80.2

Q ss_pred             EEEeeccCCcceEEccccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEE
Q psy17021         77 FVHKTSVDEVPYAMCPFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        77 sVh~~~~kG~v~aL~~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y  152 (199)
                      .+......+++.+++--...|++|-  ++++++|++...++.. .........+.++..  .+.++++|+.-.++.++..
T Consensus       439 ~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~  517 (615)
T 1pgu_A          439 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDL  517 (615)
T ss_dssp             EEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             eeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeC
Confidence            3444456778887765533454554  5789999998876643 233222345777765  5789999998888877654


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEEe-----------CCeEEEEcCCCcEEEEeec
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVLD-----------YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~Ld-----------~~t~l~aD~~gNl~vlr~~  197 (199)
                        ..++....-.......++++.+-.           ...++.+..+|.+.++.++
T Consensus       518 --~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~  571 (615)
T 1pgu_A          518 --QSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  571 (615)
T ss_dssp             --TTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             --CCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence              455554443433677899999875           4478888999999998765

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.03  E-value=0.07  Score=44.33  Aligned_cols=105  Identities=10%  Similarity=-0.009  Sum_probs=63.8

Q ss_pred             cCe-EEEEe--CCEEEEEEcCCcceeeeeecc---CcCceEEEEEE--eCCEEEEEecc--ccEEEEEEeCCCCeEEEEe
Q psy17021         94 QGA-LLVGV--GRYLRLYDLGKKKLLRKCENK---HLPNLIVKIES--MGHRIYVSDVQ--ESVFLVRYKRYENQLLIFA  163 (199)
Q Consensus        94 ~g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~---~~~~~i~~l~~--~~~~IlVGD~~--~Sv~ll~y~~~~~~l~~va  163 (199)
                      +|+ +.++-  +++|.+|++...++.......   .....+..+..  .+.++++++-.  .++.++..++..+++..+.
T Consensus       221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~  300 (361)
T 3scy_A          221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG  300 (361)
T ss_dssp             TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred             CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence            454 54444  689999999765543222221   11122344443  57788888876  6899999886666665554


Q ss_pred             ccCCceeEEEEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021        164 DDTQPRWITTSCVL-DYNTVASAD-KFGNVCIVSTYR  198 (199)
Q Consensus       164 rD~~~~wvta~~~L-d~~t~l~aD-~~gNl~vlr~~~  198 (199)
                      .-....++.++.+- |...+++++ ..+++.++++++
T Consensus       301 ~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~  337 (361)
T 3scy_A          301 YQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ  337 (361)
T ss_dssp             EEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred             EecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence            43223455566665 334566666 668888988775

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=97.00  E-value=0.088  Score=44.63  Aligned_cols=170  Identities=13%  Similarity=0.086  Sum_probs=91.2

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcc-cccCceeeeeEEEE-EcCceeEECC-----------eeeEEEee-ccC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKV-RIKGFRKAHQTHTH-SGRSDRLVGN-----------AMEFVHKT-SVD   84 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~-~~~~~~~~~~~~~~-~~~~ri~vgd-----------klesVh~~-~~k   84 (199)
                      .++|++|.. +.+||||+...+.+....... .....+   ..+.- ..+.+++.|.           ..+.+... .-.
T Consensus        93 d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V---~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~  169 (344)
T 4gqb_B           93 ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIV---STVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA  169 (344)
T ss_dssp             TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCE---EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCE---EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC
Confidence            467887776 789999997766554322110 011222   12211 1223444321           12222222 245


Q ss_pred             CcceEEccc--cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeCCCC
Q psy17021         85 EVPYAMCPF--QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        85 G~v~aL~~f--~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      +.|+++.--  ...++++  -.++|++|++...+.............+.++...   +++++.|..-..|.++..+..+ 
T Consensus       170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~-  248 (344)
T 4gqb_B          170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS-  248 (344)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---
T ss_pred             CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc-
Confidence            677776532  3345543  3689999999876644433222112236666643   4577888887788776543222 


Q ss_pred             eEEEEeccCCceeEEEEEEEeC-Ce-EEEEcCCCcEEEEe
Q psy17021        158 QLLIFADDTQPRWITTSCVLDY-NT-VASADKFGNVCIVS  195 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~Ld~-~t-~l~aD~~gNl~vlr  195 (199)
                      .+..+.  ....+|+++.|-.+ .. ++.+..++.+.++.
T Consensus       249 ~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd  286 (344)
T 4gqb_B          249 CVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLD  286 (344)
T ss_dssp             CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred             EEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence            222222  24567899988744 34 55677888888764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=96.99  E-value=0.12  Score=42.96  Aligned_cols=111  Identities=12%  Similarity=0.043  Sum_probs=71.1

Q ss_pred             cCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..++++++.-- +|.++++  -.++|++|++...+....  +......+.++..  .+++++.|..-..|.++..+. ..
T Consensus       183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~  259 (340)
T 1got_B          183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQ  259 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TE
T ss_pred             CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-Cc
Confidence            45677776543 3444433  368999999987654332  2211234666665  477999999888888875432 22


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      .+..+..+.....++++.+- |...++.+..++++.++..
T Consensus       260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~  299 (340)
T 1got_B          260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA  299 (340)
T ss_dssp             EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence            33344444445578888887 4457888899999988753

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.98  E-value=0.061  Score=44.78  Aligned_cols=108  Identities=13%  Similarity=0.161  Sum_probs=66.8

Q ss_pred             CcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         85 EVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        85 G~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      ..+.++.-- +|+ |++| ..+.|++|++...+++......  ...+.++.-  .+.+++.|..-..|.++..+  ...+
T Consensus       165 ~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~--~~~~  240 (321)
T 3ow8_A          165 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH--AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ--HANL  240 (321)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--SSCCCEEEECTTSCEEEEECTTSCEEEEETT--TCCE
T ss_pred             ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc--CCceeEEEEcCCCCEEEEEcCCCeEEEEECC--Ccce
Confidence            345544322 344 4433 3688999999877765443221  122444443  56799999988888887543  3333


Q ss_pred             EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        160 LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       160 ~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...-. ....+++++.+- |...++.+..++.+.+..+.
T Consensus       241 ~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~  278 (321)
T 3ow8_A          241 AGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG  278 (321)
T ss_dssp             EEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence            22222 245688999887 44578888899999887653

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=96.97  E-value=0.1  Score=41.75  Aligned_cols=140  Identities=13%  Similarity=0.099  Sum_probs=84.7

Q ss_pred             CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEE--ccccCeE
Q psy17021         20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAM--CPFQGAL   97 (199)
Q Consensus        20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL--~~f~g~L   97 (199)
                      ++.|.||.++.+||||+...++++..+.                                 ..-.+.|+++  .|-...|
T Consensus        36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~---------------------------------~~~~~~V~~v~~~~~~~~l   82 (318)
T 4ggc_A           36 GNVLAVALDNSVYLWSASSGDILQLLQM---------------------------------EQPGEYISSVAWIKEGNYL   82 (318)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEEEEEEC---------------------------------CSTTCCEEEEEECTTSSEE
T ss_pred             CCEEEEEeCCEEEEEECCCCCEEEEEEe---------------------------------cCCCCeEEEEEECCCCCEE
Confidence            5678899999999999744322221110                                 1112223333  2322344


Q ss_pred             EEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEE
Q psy17021         98 LVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCV  176 (199)
Q Consensus        98 Laa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~  176 (199)
                      +.| -.++|++|++...+.++.....  ...+..+...++.++.|.....+..............+..  ....+.++.+
T Consensus        83 ~sgs~Dg~v~iw~~~~~~~~~~~~~h--~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  158 (318)
T 4ggc_A           83 AVGTSSAEVQLWDVQQQKRLRNMTSH--SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG--HSQEVCGLRW  158 (318)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEECC--SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC--CSSCEEEEEE
T ss_pred             EEEECCCcEEEeecCCceeEEEecCc--cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcC--ccCceEEEEE
Confidence            443 3689999999888765554332  2346777788999999988877766654443344433333  3345556655


Q ss_pred             E-eCCeEEEEcCCCcEEEEee
Q psy17021        177 L-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       177 L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      - +...++.+..++.+.++..
T Consensus       159 ~~~~~~l~s~~~d~~i~iwd~  179 (318)
T 4ggc_A          159 APDGRHLASGGNDNLVNVWPS  179 (318)
T ss_dssp             CTTSSEEEEEETTSCEEEEES
T ss_pred             cCCCCEEEEEecCcceeEEEC
Confidence            5 4457888888898887643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=96.93  E-value=0.1  Score=44.06  Aligned_cols=110  Identities=14%  Similarity=0.021  Sum_probs=68.1

Q ss_pred             CCcceEEccc-cC-eEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CCEEEEEecccc-E---------
Q psy17021         84 DEVPYAMCPF-QG-ALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GHRIYVSDVQES-V---------  147 (199)
Q Consensus        84 kG~v~aL~~f-~g-~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~~IlVGD~~~S-v---------  147 (199)
                      .+.+.+++-- +| .++++  -+++|++|++...++......   ...+.++...  +.++++++.... +         
T Consensus       302 ~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~  378 (433)
T 3bws_A          302 PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV---FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL  378 (433)
T ss_dssp             EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred             CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC---CCCCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence            3445544322 24 56555  368999999987766554332   2335566553  668888886542 2         


Q ss_pred             ---EEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEc-CCCcEEEEeecC
Q psy17021        148 ---FLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASAD-KFGNVCIVSTYR  198 (199)
Q Consensus       148 ---~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD-~~gNl~vlr~~~  198 (199)
                         .+..|+....+....-..  ..+++++.+-.+ ..++.++ .++++.+++++.
T Consensus       379 ~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          379 VLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             SCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             cceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence               566677766665554443  346788887644 4566666 489999998753

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=96.92  E-value=0.11  Score=41.40  Aligned_cols=114  Identities=16%  Similarity=0.104  Sum_probs=67.7

Q ss_pred             ccCCcceEEcccc---Ce-EEEE-eCCEEEEEEcCCcceeeeeec----------c-CcCceEEEEEE--e---CCEEEE
Q psy17021         82 SVDEVPYAMCPFQ---GA-LLVG-VGRYLRLYDLGKKKLLRKCEN----------K-HLPNLIVKIES--M---GHRIYV  140 (199)
Q Consensus        82 ~~kG~v~aL~~f~---g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~----------~-~~~~~i~~l~~--~---~~~IlV  140 (199)
                      ...++++++.--.   +. +++| -.++|++|++...+.+.....          . .....+.++..  .   ++++++
T Consensus       108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~  187 (351)
T 3f3f_A          108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV  187 (351)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred             ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence            3456777765443   54 4433 368999999976543221110          0 01112444443  2   789999


Q ss_pred             EeccccEEEEEEeCCCCeEEEE-eccCCceeEEEEEEEeC-----CeEEEEcCCCcEEEEeec
Q psy17021        141 SDVQESVFLVRYKRYENQLLIF-ADDTQPRWITTSCVLDY-----NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       141 GD~~~Sv~ll~y~~~~~~l~~v-arD~~~~wvta~~~Ld~-----~t~l~aD~~gNl~vlr~~  197 (199)
                      |..-..+ ++. ....++...+ .-.....+++++.+-.+     +.++.+..+|.+.++.+.
T Consensus       188 ~~~~~~~-~~~-~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~  248 (351)
T 3f3f_A          188 SALEQAI-IYQ-RGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT  248 (351)
T ss_dssp             EETTEEE-EEE-ECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred             ecCCCcE-EEE-ccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence            9988777 333 2333443222 22335678999999866     468889999999998764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=96.91  E-value=0.073  Score=43.25  Aligned_cols=93  Identities=6%  Similarity=-0.034  Sum_probs=64.4

Q ss_pred             eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCCCeEEEEec--cCCceeEEEEE
Q psy17021        101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYENQLLIFAD--DTQPRWITTSC  175 (199)
Q Consensus       101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var--D~~~~wvta~~  175 (199)
                      -+++|++|++...+++..-..  ....+.++..   .+++++.|..-.+|.++..  ..++....-.  ......++++.
T Consensus        93 ~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~v~~~~  168 (366)
T 3k26_A           93 SRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLSVSKDHALRLWNI--QTDTLVAIFGGVEGHRDEVLSAD  168 (366)
T ss_dssp             TTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEEEETTSCEEEEET--TTTEEEEEECSTTSCSSCEEEEE
T ss_pred             CCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe--ecCeEEEEecccccccCceeEEE
Confidence            367899999987765443321  2334777765   4679999998888888755  3444433332  44567889998


Q ss_pred             EE-eCCeEEEEcCCCcEEEEeec
Q psy17021        176 VL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       176 ~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +- |.+.++.+..+|.+.++.+.
T Consensus       169 ~~~~~~~l~~~~~dg~i~i~d~~  191 (366)
T 3k26_A          169 YDLLGEKIMSCGMDHSLKLWRIN  191 (366)
T ss_dssp             ECTTSSEEEEEETTSCEEEEESC
T ss_pred             ECCCCCEEEEecCCCCEEEEECC
Confidence            87 45578888999999988653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=96.91  E-value=0.094  Score=42.49  Aligned_cols=162  Identities=7%  Similarity=-0.025  Sum_probs=88.3

Q ss_pred             cccCCEEEEeec-CeeEEEecch---------hhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-----------
Q psy17021         17 CPFQGALLVGVG-RYLRLYDLGK---------KKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM-----------   75 (199)
Q Consensus        17 ~~f~~~ll~~~~-~~l~~y~~g~---------k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl-----------   75 (199)
                      .+ .+.++.|-. +.+++||+..         .+.++.-..    +..+    .-..+..+.++++..-           
T Consensus       110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----~~~v----~~~~~~~~~l~~~~~d~~i~i~d~~~~  180 (342)
T 1yfq_A          110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV----KNKI----FTMDTNSSRLIVGMNNSQVQWFRLPLC  180 (342)
T ss_dssp             ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS----CCCE----EEEEECSSEEEEEESTTEEEEEESSCC
T ss_pred             CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee----CCce----EEEEecCCcEEEEeCCCeEEEEECCcc
Confidence            34 566666655 7899999876         554443321    1222    2223333445443211           


Q ss_pred             ----eEEEeeccCCcceEEccc--cCe-EEEE-eCCEEEEEEcCCc------ceeeeeeccCc-------CceEEEEEE-
Q psy17021         76 ----EFVHKTSVDEVPYAMCPF--QGA-LLVG-VGRYLRLYDLGKK------KLLRKCENKHL-------PNLIVKIES-  133 (199)
Q Consensus        76 ----esVh~~~~kG~v~aL~~f--~g~-LLaa-vg~~v~vy~l~~~------~Ll~~~~~~~~-------~~~i~~l~~-  133 (199)
                          ........++++.++.-.  +|. +++| ..+.+++|++...      +....-.....       ...+.++.. 
T Consensus       181 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  260 (342)
T 1yfq_A          181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS  260 (342)
T ss_dssp             TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC
T ss_pred             ccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc
Confidence                112233345566665544  344 4433 3679999999654      32222111101       114666654 


Q ss_pred             -eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc
Q psy17021        134 -MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN  190 (199)
Q Consensus       134 -~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN  190 (199)
                       .++++++|+.-..|.++.  ...++....-..+...+++++. -|...++.+-.+|-
T Consensus       261 ~~~~~l~~~~~dg~i~vwd--~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          261 PRHKFLYTAGSDGIISCWN--LQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSDDT  315 (342)
T ss_dssp             TTTCCEEEEETTSCEEEEE--TTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred             CCCCEEEEecCCceEEEEc--CccHhHhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence             477899999877777764  4555554444444367888888 66666666665554

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.91  E-value=0.15  Score=42.87  Aligned_cols=161  Identities=9%  Similarity=0.016  Sum_probs=88.7

Q ss_pred             EEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-CCeeeEEEeeccCC------------cceE
Q psy17021         24 LVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-GNAMEFVHKTSVDE------------VPYA   89 (199)
Q Consensus        24 l~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-gdklesVh~~~~kG------------~v~a   89 (199)
                      ++|-+ +.+++||+-+.+.+..-+    .+..   +.. ..+..+++++ .+.  .+....++.            .+.+
T Consensus        75 ~~~~~d~~v~iWd~~~~~~~~~~~----~~~~---v~~-v~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~~~  144 (355)
T 3vu4_A           75 FVTGVKEVVHIWDDVKKQDVSRIK----VDAP---VKD-LFLSREFIVVSYGD--VISVFKFGNPWKRITDDIRFGGVCE  144 (355)
T ss_dssp             EECSSTTEEEEEETTTTEEEEEEE----CSSC---EEE-EEECSSEEEEEETT--EEEEEESSTTCCBSSCCEEEEEEEE
T ss_pred             EEECCccEEEEEECCCCcEEEEEE----CCCc---eEE-EEEcCCEEEEEEcC--EEEEEECCCCceeeEEeccCCceEE
Confidence            45555 589999997766655332    2232   222 2233344432 222  122222222            2334


Q ss_pred             EccccCeEEEE---eCCEEEEEEcCCcc-------------eee-eeeccCcCceEEEEEE--eCCEEEEEecccc-EEE
Q psy17021         90 MCPFQGALLVG---VGRYLRLYDLGKKK-------------LLR-KCENKHLPNLIVKIES--MGHRIYVSDVQES-VFL  149 (199)
Q Consensus        90 L~~f~g~LLaa---vg~~v~vy~l~~~~-------------Ll~-~~~~~~~~~~i~~l~~--~~~~IlVGD~~~S-v~l  149 (199)
                      +.+  +.++++   -..+|++|++...+             +.. ...+..-...|.++.-  .+++++.|..-.+ |.+
T Consensus       145 ~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i  222 (355)
T 3vu4_A          145 FSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV  222 (355)
T ss_dssp             EET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred             EEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence            444  444443   34689999997533             000 1122211223666654  5778999988887 777


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...+. ...+..+.+...+..++++.+-. ...++.+..++.+.++.+.
T Consensus       223 wd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~  270 (355)
T 3vu4_A          223 FKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF  270 (355)
T ss_dssp             EETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred             EECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence            65432 33444554444667899999874 4467778888999998764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=96.90  E-value=0.13  Score=42.69  Aligned_cols=166  Identities=15%  Similarity=0.138  Sum_probs=92.6

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCcee-EEC--Ce---------eeEE-EeeccCC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDR-LVG--NA---------MEFV-HKTSVDE   85 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri-~vg--dk---------lesV-h~~~~kG   85 (199)
                      .++++.|.+ +.+++||+...+.++.-+.-   ...   +..+....+++. +.|  |.         .+.+ .+....+
T Consensus       154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~---v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~  227 (340)
T 1got_B          154 DNQIVTSSGDTTCALWDIETGQQTTTFTGH---TGD---VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES  227 (340)
T ss_dssp             TTEEEEEETTSCEEEEETTTTEEEEEECCC---SSC---EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS
T ss_pred             CCcEEEEECCCcEEEEECCCCcEEEEEcCC---CCc---eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC
Confidence            466777766 88999999776654422111   111   222222222222 222  11         1112 2223456


Q ss_pred             cceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021         86 VPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL  160 (199)
Q Consensus        86 ~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~  160 (199)
                      ++++++-- +|. |++|- .++|++|++...+.+...........+.++.-  .+.++++|.--..|.++.... ...+.
T Consensus       228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~  306 (340)
T 1got_B          228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-ADRAG  306 (340)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEE
T ss_pred             CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc-CcEee
Confidence            67765533 344 44333 57899999987664443333222224666654  477999998887887765432 23333


Q ss_pred             EEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEE
Q psy17021        161 IFADDTQPRWITTSCVLDYN-TVASADKFGNVCIV  194 (199)
Q Consensus       161 ~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vl  194 (199)
                      .+..  ...+|+++.+-.++ .++.+..++.+.+.
T Consensus       307 ~~~~--h~~~v~~~~~s~dg~~l~s~s~D~~i~iW  339 (340)
T 1got_B          307 VLAG--HDNRVSCLGVTDDGMAVATGSWDSFLKIW  339 (340)
T ss_dssp             EEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred             Eeec--CCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence            3332  34578888887544 68888889988765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.88  E-value=0.13  Score=43.51  Aligned_cols=111  Identities=13%  Similarity=0.155  Sum_probs=71.6

Q ss_pred             ccCCcceEEc--cccCeEEEEe----CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEE--EeccccEEEEE
Q psy17021         82 SVDEVPYAMC--PFQGALLVGV----GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYV--SDVQESVFLVR  151 (199)
Q Consensus        82 ~~kG~v~aL~--~f~g~LLaav----g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlV--GD~~~Sv~ll~  151 (199)
                      ...+++.++.  |..+.+++..    .+.+++|++...+.+.....   +..+.++.-  .+..+++  |..-..+.++.
T Consensus       257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~  333 (401)
T 4aez_A          257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS  333 (401)
T ss_dssp             CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred             CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence            4556666654  4345676653    58999999987765554433   234666654  5678888  65777888887


Q ss_pred             EeCCCCeEEEEec-cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        152 YKRYENQLLIFAD-DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       152 y~~~~~~l~~var-D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +..  +.+..... ......++++.+- |...++.+..+|.+.++.+.
T Consensus       334 ~~~--~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~  379 (401)
T 4aez_A          334 YSS--SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY  379 (401)
T ss_dssp             EET--TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred             cCC--ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence            754  33333221 2334567777776 44578888999999998764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=96.87  E-value=0.059  Score=44.56  Aligned_cols=119  Identities=13%  Similarity=0.127  Sum_probs=74.1

Q ss_pred             EEEeeccCCcceEEc--ccc--C-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccE
Q psy17021         77 FVHKTSVDEVPYAMC--PFQ--G-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESV  147 (199)
Q Consensus        77 sVh~~~~kG~v~aL~--~f~--g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv  147 (199)
                      .+.....++.+.++.  ++.  + .+++| -++.|++|++...+.+..-..  ....+.++...  ++ .+++|+.-..+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~ll~~~~~dg~i  211 (408)
T 4a11_B          134 TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG--HRQEILAVSWSPRYDYILATASADSRV  211 (408)
T ss_dssp             EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC--CCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred             cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC--CCCcEEEEEECCCCCcEEEEEcCCCcE
Confidence            344445566666544  332  2 34433 367899999987654433221  22346777654  44 58899988888


Q ss_pred             EEEEEeCCCCeEEEEec-------------cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        148 FLVRYKRYENQLLIFAD-------------DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       148 ~ll~y~~~~~~l~~var-------------D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .++..+.....+..+..             .....+++++.+- |...++.+..+|.+.++.+.
T Consensus       212 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~  275 (408)
T 4a11_B          212 KLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSS  275 (408)
T ss_dssp             EEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECC
Confidence            88876544433333321             2345678888887 44478889999999998754

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.86  E-value=0.17  Score=42.81  Aligned_cols=168  Identities=12%  Similarity=0.058  Sum_probs=92.0

Q ss_pred             cccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-------------eeEEEeec
Q psy17021         17 CPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-------------MEFVHKTS   82 (199)
Q Consensus        17 ~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-------------lesVh~~~   82 (199)
                      .+-...|++|.. +.+++||+...+.++.-...   ..    -+.-..|.+..++.|..             ........
T Consensus       143 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~----~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  215 (401)
T 4aez_A          143 SHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH---QA----RVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQG  215 (401)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC---SS----CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred             CCCCCEEEEECCCCeEEEEECcCCeEEEEecCC---CC----ceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcC
Confidence            343446666654 78999999876665543221   12    22334445455555421             11222233


Q ss_pred             cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEe--ccccEEEEEEeC
Q psy17021         83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSD--VQESVFLVRYKR  154 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD--~~~Sv~ll~y~~  154 (199)
                      ..+.+.++.-- +|. |++|- .+.|++|++...+.......  ....+.++...   ++.++.|.  .-..+.++  +.
T Consensus       216 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~--d~  291 (401)
T 4aez_A          216 HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN--HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW--NA  291 (401)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC--CSSCCCEEEECTTSTTEEEEECCTTTCEEEEE--ET
T ss_pred             CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC--CcceEEEEEECCCCCCEEEEecCCCCCEEEEE--EC
Confidence            45666665433 444 44333 58999999987654433221  12335555553   35666654  44555555  43


Q ss_pred             CCCe-EEEEeccCCceeEEEEEEEeCC-eEEE--EcCCCcEEEEeecC
Q psy17021        155 YENQ-LLIFADDTQPRWITTSCVLDYN-TVAS--ADKFGNVCIVSTYR  198 (199)
Q Consensus       155 ~~~~-l~~varD~~~~wvta~~~Ld~~-t~l~--aD~~gNl~vlr~~~  198 (199)
                      ..++ +..+.   ....++++.+-.++ .++.  +..+|.+.++.++.
T Consensus       292 ~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~  336 (401)
T 4aez_A          292 ATGARVNTVD---AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS  336 (401)
T ss_dssp             TTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred             CCCCEEEEEe---CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence            4433 33332   34568888887444 5555  44789999887653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=96.81  E-value=0.081  Score=44.15  Aligned_cols=106  Identities=12%  Similarity=0.078  Sum_probs=66.0

Q ss_pred             CcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEEeCCC--
Q psy17021         85 EVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRYKRYE--  156 (199)
Q Consensus        85 G~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y~~~~--  156 (199)
                      +.+.++.-- +|. |++|- .++|++|++..+.+......   ...+.++...  +. +++.|..-..+.++......  
T Consensus       164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  240 (383)
T 3ei3_B          164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK  240 (383)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred             CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence            445555433 244 44333 58999999965443222222   2346666654  44 88999888888887665422  


Q ss_pred             CeE-EEEeccCCceeEEEEEEEe--CCeEEEEcCCCcEEEEee
Q psy17021        157 NQL-LIFADDTQPRWITTSCVLD--YNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l-~~varD~~~~wvta~~~Ld--~~t~l~aD~~gNl~vlr~  196 (199)
                      ..+ ..+.   ...+++++.+-.  ...++.+..++.+.++.+
T Consensus       241 ~~~~~~~~---~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~  280 (383)
T 3ei3_B          241 NSYIAEMP---HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS  280 (383)
T ss_dssp             TCEEEEEE---CSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred             cceEEEec---CCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence            333 3332   466888888874  457888889999998864

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=96.81  E-value=0.19  Score=42.55  Aligned_cols=93  Identities=17%  Similarity=0.122  Sum_probs=61.4

Q ss_pred             EEEEEEcCCcc--eeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-e
Q psy17021        104 YLRLYDLGKKK--LLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-D  178 (199)
Q Consensus       104 ~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d  178 (199)
                      .++.|+....+  ..+......-...|.++..  .+.+|++|..-.+|.++  +.+..+....-......+|++++|- |
T Consensus       246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw--d~~~~~~~~~~~~gH~~~V~~v~fSpd  323 (365)
T 4h5i_A          246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV--KLKDLSMSKIFKQAHSFAITEVTISPD  323 (365)
T ss_dssp             EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE--ETTTTEEEEEETTSSSSCEEEEEECTT
T ss_pred             EEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE--ECCCCcEEEEecCcccCCEEEEEECCC
Confidence            56667664432  2222222212234666664  57799999998898886  4455555443345567789999998 4


Q ss_pred             CCeEEEEcCCCcEEEEeecC
Q psy17021        179 YNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       179 ~~t~l~aD~~gNl~vlr~~~  198 (199)
                      ...++.+-.++.+.++.+|+
T Consensus       324 g~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          324 STYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             SCEEEEEETTSEEEEEECCT
T ss_pred             CCEEEEEeCCCeEEEEEcCC
Confidence            44677789999999999986

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=96.80  E-value=0.14  Score=40.94  Aligned_cols=180  Identities=13%  Similarity=0.172  Sum_probs=100.9

Q ss_pred             cceeecc--cCCEEEEee---cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC-
Q psy17021         12 VPYAMCP--FQGALLVGV---GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD-   84 (199)
Q Consensus        12 ~~~~~~~--f~~~ll~~~---~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k-   84 (199)
                      .|.+++-  -.|+|+|+-   .+.+++||.. .++++.-...  ....+.   .+....++++++++. -..+.....+ 
T Consensus        78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~~~~~--~~~~~~---~i~~~~~g~l~v~~~~~~~i~~~~~~g  151 (286)
T 1q7f_A           78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRKFGAT--ILQHPR---GVTVDNKGRIIVVECKVMRVIIFDQNG  151 (286)
T ss_dssp             SEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEEECTT--TCSCEE---EEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred             CceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEEecCc--cCCCce---EEEEeCCCCEEEEECCCCEEEEEcCCC
Confidence            4666653  478998887   4789999943 3333322111  001221   222222345555321 1111111111 


Q ss_pred             ------------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEE
Q psy17021         85 ------------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVF  148 (199)
Q Consensus        85 ------------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~  148 (199)
                                  ..+++++-- +|+++++-  ++.|++|+...+.+ ...........+..+... +..++|+|....=.
T Consensus       152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~  230 (286)
T 1q7f_A          152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYL-RQIGGEGITNYPIGVGINSNGEILIADNHNNFN  230 (286)
T ss_dssp             CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEE-EEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred             CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEE-EEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence                        234554433 47787765  68999999865433 222111111356677664 34688888765323


Q ss_pred             EEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021        149 LVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       149 ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~~  198 (199)
                      +..|+++...+..+..+.....+.++.+-.+..++++|.++.+.++++.+
T Consensus       231 i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~  280 (286)
T 1q7f_A          231 LTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ  280 (286)
T ss_dssp             EEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred             EEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence            55667776777777666555567777776566788888888899998754

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=96.79  E-value=0.18  Score=41.85  Aligned_cols=112  Identities=6%  Similarity=0.010  Sum_probs=71.7

Q ss_pred             CCcceEEccc-cCe-EEEEeC----CEEEEEEcCCcceeeeeeccC-----------cCceEEEEEE--eCCEEEEEecc
Q psy17021         84 DEVPYAMCPF-QGA-LLVGVG----RYLRLYDLGKKKLLRKCENKH-----------LPNLIVKIES--MGHRIYVSDVQ  144 (199)
Q Consensus        84 kG~v~aL~~f-~g~-LLaavg----~~v~vy~l~~~~Ll~~~~~~~-----------~~~~i~~l~~--~~~~IlVGD~~  144 (199)
                      ++++++++-- +|. |++|-.    ..|++|++...+.+.......           ....+.++..  .+++++.|..-
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  312 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD  312 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            6777776543 344 444443    589999998766544332200           1234666665  47799999877


Q ss_pred             ccEEEEEEeCCCCeEEEEec------cC--------------CceeEEEEEEEeC-----------CeEEEEcCCCcEEE
Q psy17021        145 ESVFLVRYKRYENQLLIFAD------DT--------------QPRWITTSCVLDY-----------NTVASADKFGNVCI  193 (199)
Q Consensus       145 ~Sv~ll~y~~~~~~l~~var------D~--------------~~~wvta~~~Ld~-----------~t~l~aD~~gNl~v  193 (199)
                      ..+.++..  ...+....-.      .+              ....++++.+..+           ..++.+..+|.+.+
T Consensus       313 g~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i  390 (397)
T 1sq9_A          313 GKLRFWDV--KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW  390 (397)
T ss_dssp             SEEEEEET--TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE
T ss_pred             CeEEEEEc--CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEE
Confidence            77777654  3343333333      11              1678999999866           47889999999999


Q ss_pred             Eeec
Q psy17021        194 VSTY  197 (199)
Q Consensus       194 lr~~  197 (199)
                      +.+.
T Consensus       391 w~~~  394 (397)
T 1sq9_A          391 FREA  394 (397)
T ss_dssp             EEEE
T ss_pred             EEcC
Confidence            8865

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.77  E-value=0.19  Score=42.92  Aligned_cols=140  Identities=14%  Similarity=0.125  Sum_probs=85.1

Q ss_pred             CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEccc-cCe-E
Q psy17021         20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCPF-QGA-L   97 (199)
Q Consensus        20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~f-~g~-L   97 (199)
                      ++.|.||.++.++|||....++++-+                                 ....-.+.|++++-- +|. |
T Consensus       116 ~n~lAvgld~tV~lWd~~tg~~~~~~---------------------------------~~~~~~~~V~sv~fspdg~~l  162 (420)
T 4gga_A          116 GNVLAVALDNSVYLWSASSGDILQLL---------------------------------QMEQPGEYISSVAWIKEGNYL  162 (420)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEEEEE---------------------------------ECCSTTCCEEEEEECTTSSEE
T ss_pred             CCEEEEEeCCEEEEEECCCCCEEEEE---------------------------------EecCCCCcEEEEEECCCCCEE
Confidence            57889999999999997432211111                                 111112234443311 343 4


Q ss_pred             EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEE
Q psy17021         98 LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCV  176 (199)
Q Consensus        98 Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~  176 (199)
                      ++|- ..+|++|++...+.++....  -...+.++...+++++.|..-..+.+............+...  ...++++.+
T Consensus       163 asgs~Dg~v~iWd~~~~~~~~~~~~--h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h--~~~~~~~~~  238 (420)
T 4gga_A          163 AVGTSSAEVQLWDVQQQKRLRNMTS--HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH--SQEVCGLRW  238 (420)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEE
T ss_pred             EEEECCCeEEEEEcCCCcEEEEEeC--CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccc--ccceeeeee
Confidence            4433 68899999988776554322  234577888889999999888888777655444444444433  345556666


Q ss_pred             E-eCCeEEEEcCCCcEEEEee
Q psy17021        177 L-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       177 L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      - +...++.+..++.+.+...
T Consensus       239 ~~~g~~l~s~~~D~~v~i~~~  259 (420)
T 4gga_A          239 APDGRHLASGGNDNLVNVWPS  259 (420)
T ss_dssp             CTTSSEEEEEETTSCEEEEES
T ss_pred             cCCCCeeeeeeccccceEEee
Confidence            5 4446777778888777643

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=96.77  E-value=0.19  Score=42.05  Aligned_cols=102  Identities=10%  Similarity=-0.040  Sum_probs=65.2

Q ss_pred             cCeEE-EEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021         94 QGALL-VGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRYKRYENQLLIFADDTQP  168 (199)
Q Consensus        94 ~g~LL-aav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~  168 (199)
                      +|+.+ +|- .+.|++|++...+........ ....+.++...  +. ++++|..-..+.++........+..+.. ...
T Consensus       258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~  335 (420)
T 3vl1_A          258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEG  335 (420)
T ss_dssp             TTEEEEEEETTSCEEEEETTTCCEEEEECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-STT
T ss_pred             CCCEEEEEcCCCeEEEEECCCCceeEEcccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCC
Confidence            45444 333 568999999776543333221 23357777764  44 9999998888888776543332344433 234


Q ss_pred             eeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        169 RWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       169 ~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      ..++++.+-|...++.+..++.+.++.+.
T Consensus       336 ~~v~~~~~~~~~~l~s~~~d~~v~iw~~~  364 (420)
T 3vl1_A          336 TPINNVYFAAGALFVSSGFDTSIKLDIIS  364 (420)
T ss_dssp             SCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred             CCceEEEeCCCCEEEEecCCccEEEEecc
Confidence            46777766666688889999999888754

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=96.72  E-value=0.081  Score=43.84  Aligned_cols=174  Identities=14%  Similarity=0.018  Sum_probs=95.3

Q ss_pred             ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCc-e---------eeeeEEEEEcCceeEECCeeeEEE-------
Q psy17021         18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGF-R---------KAHQTHTHSGRSDRLVGNAMEFVH-------   79 (199)
Q Consensus        18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~-~---------~~~~~~~~~~~~ri~vgdklesVh-------   79 (199)
                      +-...|++|-. +.+++||+...+.++...... .+.. +         ..+.......+++++++..-..+.       
T Consensus       159 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~  237 (425)
T 1r5m_A          159 KDGTHIISMDVENVTILWNVISGTVMQHFELKE-TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK  237 (425)
T ss_dssp             TTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS
T ss_pred             CCCCEEEEEecCCeEEEEECCCCcEEEEeeccc-cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC
Confidence            33445555544 789999997776665433221 0000 0         001111112234454432211111       


Q ss_pred             -----eeccCCcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEE
Q psy17021         80 -----KTSVDEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLV  150 (199)
Q Consensus        80 -----~~~~kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll  150 (199)
                           ....+++++++.-- +| .|+++- ...+++|++...+.......  ....+.++....+ ++++|..-..+.++
T Consensus       238 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~  315 (425)
T 1r5m_A          238 TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDDKVISCSMDGSVRLW  315 (425)
T ss_dssp             SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred             ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCccEEEEEECCCCEEEEEeCCCcEEEE
Confidence                 12335666665533 34 454444 68899999987654433221  2234667765433 88899888877776


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ..  ...+....-. .....++++.+- |...++.+..+|.+.++.+.
T Consensus       316 d~--~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~  360 (425)
T 1r5m_A          316 SL--KQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK  360 (425)
T ss_dssp             ET--TTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred             EC--CCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence            54  3444433333 234578888887 44578888899999998754

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=96.66  E-value=0.18  Score=42.60  Aligned_cols=108  Identities=9%  Similarity=0.018  Sum_probs=67.8

Q ss_pred             cceEEc--cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCCCCe
Q psy17021         86 VPYAMC--PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRYENQ  158 (199)
Q Consensus        86 ~v~aL~--~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~~~~  158 (199)
                      .++++.  |-.++++|+  -+++|++|++...+.+..-..  ....|.++.-.  + .+++.|..-.+|.++  +...++
T Consensus       216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~fsp~g~~~lasgs~D~~i~vw--d~~~~~  291 (344)
T 4gqb_B          216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV--HSQCVTGLVFSPHSVPFLASLSEDCSLAVL--DSSLSE  291 (344)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC--CSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTTCCE
T ss_pred             cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC--CCCCEEEEEEccCCCeEEEEEeCCCeEEEE--ECCCCc
Confidence            455543  445666543  368999999987665443221  12347777653  4 467778777787775  556666


Q ss_pred             EEEEeccCCceeEEEEEEE-eCCeEE-EEcCCCcEEEEeecCC
Q psy17021        159 LLIFADDTQPRWITTSCVL-DYNTVA-SADKFGNVCIVSTYRE  199 (199)
Q Consensus       159 l~~varD~~~~wvta~~~L-d~~t~l-~aD~~gNl~vlr~~~~  199 (199)
                      +..+  .-...+|+++.+= |...++ .+-.++.+.+..+|.|
T Consensus       292 ~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          292 LFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             EEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred             EEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence            6554  2345689999986 444554 5677899999988754

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=96.61  E-value=0.17  Score=43.74  Aligned_cols=110  Identities=9%  Similarity=0.037  Sum_probs=65.2

Q ss_pred             CCcceEEcccc----CeEE-EE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCC
Q psy17021         84 DEVPYAMCPFQ----GALL-VG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        84 kG~v~aL~~f~----g~LL-aa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      .++++++.--.    |++| +| -..+|++|++...+.+...... ....+.++.. .+++++.|..-..|.++.++  .
T Consensus       195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~--~  271 (450)
T 2vdu_B          195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG-HKHFVSSICCGKDYLLLSAGGDDKIFAWDWK--T  271 (450)
T ss_dssp             SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC-CSSCEEEEEECSTTEEEEEESSSEEEEEETT--T
T ss_pred             cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC-CCCceEEEEECCCCEEEEEeCCCeEEEEECC--C
Confidence            45666654333    5444 33 3579999999876654431111 1233555544 57899999877777776553  3


Q ss_pred             Ce-EEEEec-----------------------cCCceeEEEEEEEeCC-eEE-EEcCCCcEEEEee
Q psy17021        157 NQ-LLIFAD-----------------------DTQPRWITTSCVLDYN-TVA-SADKFGNVCIVST  196 (199)
Q Consensus       157 ~~-l~~var-----------------------D~~~~wvta~~~Ld~~-t~l-~aD~~gNl~vlr~  196 (199)
                      ++ +..+.-                       +....+++++.+..++ .++ +++.++.+.++.+
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          272 GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred             CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence            33 332221                       1234678888887544 444 4448899999987

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=96.59  E-value=0.24  Score=41.73  Aligned_cols=186  Identities=10%  Similarity=0.060  Sum_probs=93.4

Q ss_pred             eEEecCCCccee--ecccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEE-C------
Q psy17021          4 VHKTSVDEVPYA--MCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLV-G------   72 (199)
Q Consensus         4 ~h~t~~~~~~~~--~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~v-g------   72 (199)
                      +...+....|.+  +.+ .++++++.+  +.+++||+...++++...... .+.....+.......++++++ +      
T Consensus       116 ~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~s~~~d~~v  193 (433)
T 3bws_A          116 ISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEK-YKKKLGFVETISIPEHNELWVSQMQANAV  193 (433)
T ss_dssp             EEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHH-HHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred             EEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCccc-ccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence            344444555543  445 788888775  459999997766654211100 000000111111112233322 1      


Q ss_pred             -----CeeeEEEeec-cCCcceEEccc--cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEE
Q psy17021         73 -----NAMEFVHKTS-VDEVPYAMCPF--QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYV  140 (199)
Q Consensus        73 -----dklesVh~~~-~kG~v~aL~~f--~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlV  140 (199)
                           +..+.+.... -...+.++.--  ...++++-  ++.|++|++...+.+.....   +..+.++..  .++++++
T Consensus       194 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~  270 (433)
T 3bws_A          194 HVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYI  270 (433)
T ss_dssp             EEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEE
T ss_pred             EEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEE
Confidence                 1122222222 23345554322  23454444  58999999987665443222   334666665  4668888


Q ss_pred             Eeccc------cEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCC-eE-EEEcCCCcEEEEee
Q psy17021        141 SDVQE------SVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYN-TV-ASADKFGNVCIVST  196 (199)
Q Consensus       141 GD~~~------Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~-t~-l~aD~~gNl~vlr~  196 (199)
                      ++...      .=.+..|+...++.......  +..++++.+-.++ .+ +.+..++.+.++..
T Consensus       271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~  332 (433)
T 3bws_A          271 AQFSASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKIEVYDL  332 (433)
T ss_dssp             EEEESCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred             EECCCCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence            87532      11355566655555443321  2355666665333 44 44467777777754

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=96.58  E-value=0.26  Score=41.38  Aligned_cols=168  Identities=13%  Similarity=0.104  Sum_probs=91.8

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEe-eccCC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHK-TSVDE   85 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~-~~~kG   85 (199)
                      ..+|+.|.+ +.+++||+...++++.-...   ...++ .+..... .+..++.|           +.-+.+.. ....+
T Consensus       166 ~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h---~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~  241 (354)
T 2pbi_B          166 DMQILTASGDGTCALWDVESGQLLQSFHGH---GADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES  241 (354)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEECC---SSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             CCEEEEEeCCCcEEEEeCCCCeEEEEEcCC---CCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence            446777766 78999999887766532211   01110 0011111 11233332           11122222 23456


Q ss_pred             cceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEE
Q psy17021         86 VPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLL  160 (199)
Q Consensus        86 ~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~  160 (199)
                      .++++.-. +|..+|.  ...+|++|++...+.+...........+.++.-  .+.++++|..-..+.++.... ...+.
T Consensus       242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~-~~~~~  320 (354)
T 2pbi_B          242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK-GSRVS  320 (354)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEE
T ss_pred             CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC-CceEE
Confidence            77776533 3444433  368999999976543332222111123445543  478999999888888875432 23333


Q ss_pred             EEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021        161 IFADDTQPRWITTSCVL-DYNTVASADKFGNVCIV  194 (199)
Q Consensus       161 ~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vl  194 (199)
                      .+.  ....+++++.+- |...++.+..++.+.++
T Consensus       321 ~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW  353 (354)
T 2pbi_B          321 ILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVW  353 (354)
T ss_dssp             EEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred             EEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence            333  235688899887 44578888999988775

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=96.58  E-value=0.23  Score=40.52  Aligned_cols=111  Identities=13%  Similarity=0.065  Sum_probs=69.3

Q ss_pred             CCcceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCe
Q psy17021         84 DEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQ  158 (199)
Q Consensus        84 kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~  158 (199)
                      .+++++++-- +| .|+++- .+.|++|++...+.+..-...  ...+.++.  ..+.++++| .-.++.++..+...++
T Consensus       202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~  278 (372)
T 1k8k_C          202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE--TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGK  278 (372)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS--SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTE
T ss_pred             CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC--CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCce
Confidence            4566665543 34 444443 678999999776654443322  12344444  456677777 6778888888762233


Q ss_pred             EEEE--------------------------------------eccCCceeEEEEEEEeC-----CeEEEEcCCCcEEEEe
Q psy17021        159 LLIF--------------------------------------ADDTQPRWITTSCVLDY-----NTVASADKFGNVCIVS  195 (199)
Q Consensus       159 l~~v--------------------------------------arD~~~~wvta~~~Ld~-----~t~l~aD~~gNl~vlr  195 (199)
                      +..+                                      -.......|+++++...     ..++.+..+|.+.+.+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~  358 (372)
T 1k8k_C          279 LSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD  358 (372)
T ss_dssp             EEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred             EEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence            2221                                      11244568999987744     5788899999999987


Q ss_pred             ec
Q psy17021        196 TY  197 (199)
Q Consensus       196 ~~  197 (199)
                      +.
T Consensus       359 ~~  360 (372)
T 1k8k_C          359 VR  360 (372)
T ss_dssp             HH
T ss_pred             ec
Confidence            53

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=96.58  E-value=0.22  Score=40.27  Aligned_cols=113  Identities=14%  Similarity=0.031  Sum_probs=69.6

Q ss_pred             cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccE------------
Q psy17021         83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESV------------  147 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv------------  147 (199)
                      ..+++.++.-- +|. |+++- .+.|++|++...+.+...... .+.........+.++++|....+.            
T Consensus       217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  295 (369)
T 3zwl_B          217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD-CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF  295 (369)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred             CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC-CCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence            45667765533 344 44443 689999999887765554432 233334444467899998877643            


Q ss_pred             EEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        148 FLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       148 ~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .+.-|+....+....-.. ....++++.+- |...++.+..+|.+.++.+.
T Consensus       296 ~i~~~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  345 (369)
T 3zwl_B          296 EARFYHKIFEEEIGRVQG-HFGPLNTVAISPQGTSYASGGEDGFIRLHHFE  345 (369)
T ss_dssp             EEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred             eeEEEecCCCcchhheec-ccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence            334444444443333332 24578888887 44578889999999998765

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=96.57  E-value=0.15  Score=43.05  Aligned_cols=115  Identities=14%  Similarity=0.062  Sum_probs=63.0

Q ss_pred             cCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEE---eccccEEEEEEeC
Q psy17021         83 VDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVS---DVQESVFLVRYKR  154 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVG---D~~~Sv~ll~y~~  154 (199)
                      ..+.++++.-- +|. |+++ -.++|++|++...+.+...........+..+.  ..+.++++|   ..-..+.++....
T Consensus       175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~  254 (402)
T 2aq5_A          175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH  254 (402)
T ss_dssp             CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB
T ss_pred             CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc
Confidence            56677776533 454 4444 36899999998776544331111111133333  345677777   4555666655433


Q ss_pred             CCCeEEEEeccCCceeEEEEEEEeCC-eE-EEEcCCCcEEEEeecC
Q psy17021        155 YENQLLIFADDTQPRWITTSCVLDYN-TV-ASADKFGNVCIVSTYR  198 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~Ld~~-t~-l~aD~~gNl~vlr~~~  198 (199)
                      ....+....-+ ...+++++.+-.++ .+ +++..+++|.++.+..
T Consensus       255 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~  299 (402)
T 2aq5_A          255 LEEPLSLQELD-TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS  299 (402)
T ss_dssp             CSSCSEEEECC-CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred             ccCCceEEecc-CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence            22212222222 23457777776443 44 4567799999987653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.57  E-value=0.26  Score=40.88  Aligned_cols=173  Identities=13%  Similarity=0.076  Sum_probs=98.2

Q ss_pred             eeecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC-----------CeeeEEEe
Q psy17021         14 YAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG-----------NAMEFVHK   80 (199)
Q Consensus        14 ~~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg-----------dklesVh~   80 (199)
                      .++.+-...|++|.. +.+++||+...+....-+..   ...+   ..+.-. .+..++.|           ...+.++.
T Consensus       128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~---~~~v---~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~  201 (321)
T 3ow8_A          128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR---GKFI---LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT  201 (321)
T ss_dssp             EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS---SSCE---EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC---CceE---EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence            445555556666654 78999998665433322111   0111   111111 11222322           12233333


Q ss_pred             e-ccCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeC
Q psy17021         81 T-SVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        81 ~-~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      . ...+++++++-- +|++|++.  ..+|++|++...++.....-  -...+.++.-  .+.+++.|..-.+|.+...  
T Consensus       202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~--  277 (321)
T 3ow8_A          202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG--HASWVLNVAFCPDDTHFVSSSSDKSVKVWDV--  277 (321)
T ss_dssp             ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEET--
T ss_pred             EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC--CCCceEEEEECCCCCEEEEEeCCCcEEEEeC--
Confidence            3 245566665432 45555443  47899999987665443221  2234666665  4678999988888887754  


Q ss_pred             CCCeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021        155 YENQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~  197 (199)
                      ...+....-.+ ....|+++.+-. ...++.+..++.+.++.+|
T Consensus       278 ~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          278 GTRTCVHTFFD-HQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             TTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCCEEEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            34443333233 345688888874 4578888999999999887

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=96.53  E-value=0.15  Score=43.01  Aligned_cols=171  Identities=13%  Similarity=0.104  Sum_probs=87.5

Q ss_pred             CCEEEEeec-CeeEEEecchhhhhhhhhhcc-cccCceeeeeEEEEE-cCceeEECC-----------eeeEEEee-ccC
Q psy17021         20 QGALLVGVG-RYLRLYDLGKKKLLRKCENKV-RIKGFRKAHQTHTHS-GRSDRLVGN-----------AMEFVHKT-SVD   84 (199)
Q Consensus        20 ~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~-~~~~~~~~~~~~~~~-~~~ri~vgd-----------klesVh~~-~~k   84 (199)
                      .+++|+|.+ +.+++||+-.++.+....... .....+   ..+.-. .+.+++.|.           ..+.+... .-.
T Consensus       105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V---~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~  181 (357)
T 4g56_B          105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIV---KTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS  181 (357)
T ss_dssp             TTEEEEEETTSCEEEC--------CCCCEEECCCSSCE---EEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCE---EEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence            467777766 889999986655443211110 011222   122111 223343321           12222222 235


Q ss_pred             CcceEEcc--ccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeCCCC
Q psy17021         85 EVPYAMCP--FQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        85 G~v~aL~~--f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ++++++.-  -.+.+++  +-.++|++|++...+.............+.++...   +.++++|+.-..|.++.....+ 
T Consensus       182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~-  260 (357)
T 4g56_B          182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD-  260 (357)
T ss_dssp             SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG-
T ss_pred             CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc-
Confidence            67777643  2333433  33689999999776544433322223457777753   5688899988888887654322 


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCe-EEEEcCCCcEEEEee
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNT-VASADKFGNVCIVST  196 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t-~l~aD~~gNl~vlr~  196 (199)
                      .+..+.  .....++++.+- |... ++.+..++.+.++..
T Consensus       261 ~~~~~~--~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~  299 (357)
T 4g56_B          261 SAQTSA--VHSQNITGLAYSYHSSPFLASISEDCTVAVLDA  299 (357)
T ss_dssp             GCEEEC--CCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred             EeEEEe--ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence            222222  344578888886 4444 556788899888754

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.48  E-value=0.32  Score=40.86  Aligned_cols=174  Identities=10%  Similarity=0.090  Sum_probs=96.0

Q ss_pred             eecccCCEEEEeecCeeEEEecchhhhhhhhhhc-c---cccCceeeeeEEEEEcCcee--EECCeeeEEEeeccCCcce
Q psy17021         15 AMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-V---RIKGFRKAHQTHTHSGRSDR--LVGNAMEFVHKTSVDEVPY   88 (199)
Q Consensus        15 ~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~-~---~~~~~~~~~~~~~~~~~~ri--~vgdklesVh~~~~kG~v~   88 (199)
                      ++.+-...|.+|..+.+++||+...+.+...+.. .   .+... ...+.+...+.+.+  .--..-+.+....+.+++.
T Consensus        26 ~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~  104 (355)
T 3vu4_A           26 EFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHR-TNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVK  104 (355)
T ss_dssp             EECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTT-SSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEE
T ss_pred             EECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCC-CCEEEEEECCccEEEEEECCCCcEEEEEECCCceE
Confidence            3345556677777788999997654433322111 0   00000 00111111111122  2223345566667888999


Q ss_pred             EEccccCeEEEEeCCEEEEEEcCCc-ceeeeeeccCcCceEEEEEEeCCEEEE--EeccccEEEEEEeCCC---------
Q psy17021         89 AMCPFQGALLVGVGRYLRLYDLGKK-KLLRKCENKHLPNLIVKIESMGHRIYV--SDVQESVFLVRYKRYE---------  156 (199)
Q Consensus        89 aL~~f~g~LLaavg~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~~~~~IlV--GD~~~Sv~ll~y~~~~---------  156 (199)
                      ++..-.+.++++..+++++|++... +.+.....   +..+..+..  +++++  |..-..|.++..+...         
T Consensus       105 ~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~  179 (355)
T 3vu4_A          105 DLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV  179 (355)
T ss_dssp             EEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-----------
T ss_pred             EEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence            9887777888999999999999876 43332111   223334432  66666  5666677776654321         


Q ss_pred             --Ce----EEEEeccCCceeEEEEEEE-eCCeEEEEcCCCc-EEEEee
Q psy17021        157 --NQ----LLIFADDTQPRWITTSCVL-DYNTVASADKFGN-VCIVST  196 (199)
Q Consensus       157 --~~----l~~varD~~~~wvta~~~L-d~~t~l~aD~~gN-l~vlr~  196 (199)
                        ..    +..+  ......++++.+- |...++.+..++. +.+..+
T Consensus       180 ~~~~~~p~~~~~--~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~  225 (355)
T 3vu4_A          180 QQKAILGKGVLI--KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKT  225 (355)
T ss_dssp             -------CCEEE--CCCSSCEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred             cccccCcccEEE--EccCCceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence              00    2222  2335578888886 4446778888888 877654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=96.47  E-value=0.24  Score=42.05  Aligned_cols=172  Identities=13%  Similarity=0.159  Sum_probs=92.0

Q ss_pred             ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEE-cCceeEEC--C---------eeeEEEeeccC
Q psy17021         18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHS-GRSDRLVG--N---------AMEFVHKTSVD   84 (199)
Q Consensus        18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~-~~~ri~vg--d---------klesVh~~~~k   84 (199)
                      +-...|+.|.. +.+++||+...+.++.-..-   ...+   ..+.-. .+..++.|  |         .-+........
T Consensus       133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h---~~~v---~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~  206 (393)
T 1erj_A          133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGH---EQDI---YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE  206 (393)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTTEEEEEECCC---SSCE---EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCcEEEEEccC---CCCE---EEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence            33344554443 78999999876655432211   1111   111111 12233332  1         12233334455


Q ss_pred             CcceEEc--cccCeEEEEe--CCEEEEEEcCCcceeeeeec-----cCcCceEEEEEE--eCCEEEEEeccccEEEEEEe
Q psy17021         85 EVPYAMC--PFQGALLVGV--GRYLRLYDLGKKKLLRKCEN-----KHLPNLIVKIES--MGHRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        85 G~v~aL~--~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~-----~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~  153 (199)
                      +.+.++.  |-+|+++++.  .++|++|+....+++.....     ......+.++..  .+.+++.|..-.+|.++..+
T Consensus       207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~  286 (393)
T 1erj_A          207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ  286 (393)
T ss_dssp             SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            6666654  3356655443  68899999987665443211     111124666665  46799999998899888764


Q ss_pred             CCCC----------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        154 RYEN----------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       154 ~~~~----------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ....          ..... -.....+++++.+- |...++.+..++.+.++..
T Consensus       287 ~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~  339 (393)
T 1erj_A          287 NANNKSDSKTPNSGTCEVT-YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK  339 (393)
T ss_dssp             --------------CEEEE-EECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             CCCCcccccCCCCCcceEE-EecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            3211          11111 11234578888887 4446778888888887753

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=96.43  E-value=0.33  Score=40.52  Aligned_cols=174  Identities=9%  Similarity=0.008  Sum_probs=99.9

Q ss_pred             CCCcceeecccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC------------e
Q psy17021          9 VDEVPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN------------A   74 (199)
Q Consensus         9 ~~~~~~~~~~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd------------k   74 (199)
                      +.+.|..|+...++|.++..  +.+.++|....++++.-..-    ..+..+   ....++++|+.+            .
T Consensus        42 lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~----~~p~~i---~~~~~g~lyv~~~~~~~v~~iD~~t  114 (328)
T 3dsm_A           42 LGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF----TSPRYI---HFLSDEKAYVTQIWDYRIFIINPKT  114 (328)
T ss_dssp             CBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC----SSEEEE---EEEETTEEEEEEBSCSEEEEEETTT
T ss_pred             cCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC----CCCcEE---EEeCCCeEEEEECCCCeEEEEECCC
Confidence            44678888889999988876  68999998765555543211    222211   111123665543            1


Q ss_pred             eeEEEeeccCC------cceEEccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEecc
Q psy17021         75 MEFVHKTSVDE------VPYAMCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQ  144 (199)
Q Consensus        75 lesVh~~~~kG------~v~aL~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~  144 (199)
                      .+.....+...      .+..+..-.++|.++-   +++|.+++....++++.....   ..+..+... ++++++++.-
T Consensus       115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g---~~p~~i~~~~dG~l~v~~~~  191 (328)
T 3dsm_A          115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIG---IQPTSLVMDKYNKMWTITDG  191 (328)
T ss_dssp             TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECS---SCBCCCEECTTSEEEEEBCC
T ss_pred             CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC---CCccceEEcCCCCEEEEECC
Confidence            22222233333      4555555566887773   688999999877665544332   123334432 4568888775


Q ss_pred             c---------cEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021        145 E---------SVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIV  194 (199)
Q Consensus       145 ~---------Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vl  194 (199)
                      .         +-.+.++++..+++...-.=....+..++.+- |.+.+.+++.  .++++
T Consensus       192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~  249 (328)
T 3dsm_A          192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRM  249 (328)
T ss_dssp             BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEE
T ss_pred             CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEE
Confidence            5         46788888887776532211011255555554 4556777776  55544

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=96.38  E-value=0.24  Score=42.00  Aligned_cols=112  Identities=10%  Similarity=0.084  Sum_probs=69.9

Q ss_pred             cCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe------CCEEEEEeccccEEEEEEe
Q psy17021         83 VDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM------GHRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~------~~~IlVGD~~~Sv~ll~y~  153 (199)
                      -.+++++++-- +|+ |++|- .++|++|++...+.++..... ....+.++...      +.+++.|..-..|.++.. 
T Consensus       213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~-  290 (437)
T 3gre_A          213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF-  290 (437)
T ss_dssp             GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET-
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc-
Confidence            35788876532 344 44343 678999999887765543332 23456777443      337777776666766654 


Q ss_pred             CCCCeEEEEec-------------------------cCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        154 RYENQLLIFAD-------------------------DTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       154 ~~~~~l~~var-------------------------D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                       ..++....-.                         +....+++++.+-|...++.+..+++|.++.+.
T Consensus       291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~  358 (437)
T 3gre_A          291 -VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN  358 (437)
T ss_dssp             -TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETT
T ss_pred             -CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECC
Confidence             3333322222                         124556888888866678999999999988653

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=96.28  E-value=0.48  Score=40.79  Aligned_cols=116  Identities=10%  Similarity=0.025  Sum_probs=69.6

Q ss_pred             cCCcceEEccccCeEEEE--eCCEEEEEEcCCcceeeeeecc-----------------------CcCceEEEEEEe--C
Q psy17021         83 VDEVPYAMCPFQGALLVG--VGRYLRLYDLGKKKLLRKCENK-----------------------HLPNLIVKIESM--G  135 (199)
Q Consensus        83 ~kG~v~aL~~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~-----------------------~~~~~i~~l~~~--~  135 (199)
                      ..+++++++--+|++|+.  -.++|++|++...+++......                       .....+.++...  +
T Consensus       240 h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~  319 (450)
T 2vdu_B          240 HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL  319 (450)
T ss_dssp             CSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred             CCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence            446667654335655543  3579999999876644432210                       012346666654  6


Q ss_pred             CEEEEEe-ccccEEEEEE-eCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCC-------CcEEEEeecC
Q psy17021        136 HRIYVSD-VQESVFLVRY-KRYENQLLIFADDTQPRWITTSCVLDYNTVASADKF-------GNVCIVSTYR  198 (199)
Q Consensus       136 ~~IlVGD-~~~Sv~ll~y-~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~-------gNl~vlr~~~  198 (199)
                      +++++|- --.+|.++.. ++..+++..+..=..+..++++.+-.+..++.+|..       .+|-++++++
T Consensus       320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~  391 (450)
T 2vdu_B          320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL  391 (450)
T ss_dssp             SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred             CEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence            7888887 6778999888 344444544433323367888888775567776653       3456665543

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=96.27  E-value=0.43  Score=43.23  Aligned_cols=118  Identities=14%  Similarity=0.112  Sum_probs=77.4

Q ss_pred             EeeccCCcceEEccc-cCeEEEEe--CCEEEEEEcCC-cceeeeeeccCcC-ceEEEEEE--eCCEEEEEeccccEEEEE
Q psy17021         79 HKTSVDEVPYAMCPF-QGALLVGV--GRYLRLYDLGK-KKLLRKCENKHLP-NLIVKIES--MGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        79 h~~~~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~-~~Ll~~~~~~~~~-~~i~~l~~--~~~~IlVGD~~~Sv~ll~  151 (199)
                      ......+.++++.-- +|+.||+.  ..++++|++.. .++....... .+ ..|.++.-  .+.+++.|..-.+|.+..
T Consensus       486 ~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~-~H~~~V~~v~fspdg~~lasgs~D~~v~lW~  564 (611)
T 1nr0_A          486 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT-FHTAKVACVSWSPDNVRLATGSLDNSVIVWN  564 (611)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeee-ecccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence            334556777775422 45555443  68899999975 4443321221 12 23666664  467999999999999988


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      .+........+-..+...+|+++.|.+++.++.+..++.+.+..+|
T Consensus       565 ~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~~  610 (611)
T 1nr0_A          565 MNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP  610 (611)
T ss_dssp             TTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             CCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCCEEEEecc
Confidence            7543333322323333679999999988888889999999988764

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=96.27  E-value=0.3  Score=40.72  Aligned_cols=181  Identities=12%  Similarity=0.001  Sum_probs=99.0

Q ss_pred             eEEecCCCcceeecc-cCCEEEEee--cCeeEEEecchhhhhhhhhhcccc---cCceeeeeEEEEEcCceeEECCe---
Q psy17021          4 VHKTSVDEVPYAMCP-FQGALLVGV--GRYLRLYDLGKKKLLRKCENKVRI---KGFRKAHQTHTHSGRSDRLVGNA---   74 (199)
Q Consensus         4 ~h~t~~~~~~~~~~~-f~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~---~~~~~~~~~~~~~~~~ri~vgdk---   74 (199)
                      +++-+....|..++. -.|+|.|+-  ++.+.+||+...++.+.-+.- ..   ...+..+..    .++++++++.   
T Consensus        77 ~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g-~~~~~~~~p~~i~~----~~~~lyv~~~~~~  151 (328)
T 3dsm_A           77 VGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP-DMDMESGSTEQMVQ----YGKYVYVNCWSYQ  151 (328)
T ss_dssp             EEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT-TCCTTTCBCCCEEE----ETTEEEEEECTTC
T ss_pred             EEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC-CccccCCCcceEEE----ECCEEEEEcCCCC
Confidence            344444567888776 678999988  689999999877666533221 10   002222211    2455555421   


Q ss_pred             ----------eeEEEeeccCCcceEEccc-cCeEEEEeC------------CEEEEEEcCCcceeeeeeccCcCceEEEE
Q psy17021         75 ----------MEFVHKTSVDEVPYAMCPF-QGALLVGVG------------RYLRLYDLGKKKLLRKCENKHLPNLIVKI  131 (199)
Q Consensus        75 ----------lesVh~~~~kG~v~aL~~f-~g~LLaavg------------~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l  131 (199)
                                .+.+...+....+..+..- +|++.++..            +.|.+++....++.+..... ....+..+
T Consensus       152 ~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~~p~~l  230 (328)
T 3dsm_A          152 NRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGDWPSEV  230 (328)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTCCCEEE
T ss_pred             CEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-CCCCceeE
Confidence                      1222223333334443322 478777664            47999998777665443332 11235556


Q ss_pred             EEe--CCEEEEEeccccEEEEEEeCCCCeEEE--EeccCCceeEEEEEEE-eCCeEEEEc-----CCCcEEEEe
Q psy17021        132 ESM--GHRIYVSDVQESVFLVRYKRYENQLLI--FADDTQPRWITTSCVL-DYNTVASAD-----KFGNVCIVS  195 (199)
Q Consensus       132 ~~~--~~~IlVGD~~~Sv~ll~y~~~~~~l~~--varD~~~~wvta~~~L-d~~t~l~aD-----~~gNl~vlr  195 (199)
                      ...  ++++++.|-    .+..|+.+.+++..  +..+ ...+..++.+= +++.+.++|     ..+.+.++.
T Consensus       231 a~~~d~~~lyv~~~----~v~~~d~~t~~~~~~~~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d  299 (328)
T 3dsm_A          231 QLNGTRDTLYWINN----DIWRMPVEADRVPVRPFLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS  299 (328)
T ss_dssp             EECTTSCEEEEESS----SEEEEETTCSSCCSSCSBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred             EEecCCCEEEEEcc----EEEEEECCCCceeeeeeecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence            554  789999886    55678877666521  1111 12345555543 245677777     344455543

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=96.26  E-value=0.35  Score=39.06  Aligned_cols=110  Identities=12%  Similarity=0.068  Sum_probs=65.3

Q ss_pred             cCCcceEEc--cccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMC--PFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~--~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..+.++++.  |-...|++| ...++++|++...+.+..-...  ...+.++..  .++++++|..-..+.++..  ..+
T Consensus       106 ~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~--~~~  181 (312)
T 4ery_A          106 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASG  181 (312)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEET--TTC
T ss_pred             CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEEC--CCC
Confidence            345555543  322344433 3688999999876644332211  223555554  4679999998888877654  333


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      +....-.......++++.+- |...++.+..++.+.++.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~  221 (312)
T 4ery_A          182 QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY  221 (312)
T ss_dssp             CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred             ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence            33222223334456666665 4447888888999888764

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=96.23  E-value=0.37  Score=39.10  Aligned_cols=97  Identities=4%  Similarity=0.050  Sum_probs=62.6

Q ss_pred             eCCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CCEEEEEeccccEEEEEEeCCCC--eEEEEeccCCceeE
Q psy17021        101 VGRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GHRIYVSDVQESVFLVRYKRYEN--QLLIFADDTQPRWI  171 (199)
Q Consensus       101 vg~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~~IlVGD~~~Sv~ll~y~~~~~--~l~~varD~~~~wv  171 (199)
                      ..++|++|++...+  ......+..-...|.++.-.     +++++.|..-.+|.+...+....  ....+.....+.++
T Consensus       178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v  257 (297)
T 2pm7_B          178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL  257 (297)
T ss_dssp             TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred             CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcE
Confidence            46899999996533  11122233112347777653     35888998888999988765432  22233223446788


Q ss_pred             EEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        172 TTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       172 ta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .++.+- |...++.+..++.+.+.+.+
T Consensus       258 ~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          258 WRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             EEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             EEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence            888887 44567788889999998765

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=96.23  E-value=0.38  Score=39.19  Aligned_cols=173  Identities=10%  Similarity=0.034  Sum_probs=92.4

Q ss_pred             eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEE-EEcCceeEECC-----------eeeE-EEe
Q psy17021         15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT-HSGRSDRLVGN-----------AMEF-VHK   80 (199)
Q Consensus        15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~-~~~~~ri~vgd-----------kles-Vh~   80 (199)
                      ++.+-...|+.|.. +.+++||+...+.++.-....   ..+   .... ...+..++.|.           .-+. ..+
T Consensus        20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~---~~v---~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~   93 (304)
T 2ynn_A           20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE---TPV---RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF   93 (304)
T ss_dssp             EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS---SCE---EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             EECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC---CcE---EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE
Confidence            33455556666654 789999998766655332210   111   1111 11122233221           1122 223


Q ss_pred             eccCCcceEEcccc-C-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeC
Q psy17021         81 TSVDEVPYAMCPFQ-G-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        81 ~~~kG~v~aL~~f~-g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ..-.+.++++.--. + .|+.| -.++|++|++....-+... +..-...+.++.-.   +++++.|..-.+|.++....
T Consensus        94 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~  172 (304)
T 2ynn_A           94 EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT-FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ  172 (304)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE-ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred             eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh-hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence            34556777765332 3 44433 3689999999765322222 22122347777753   46899999888888876543


Q ss_pred             CCCeEEEEeccCCceeEEEEEEE---eCCeEEEEcCCCcEEEEee
Q psy17021        155 YENQLLIFADDTQPRWITTSCVL---DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~L---d~~t~l~aD~~gNl~vlr~  196 (199)
                      ....+...  ......+.++.+.   |...++.+..++.+.+..+
T Consensus       173 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~  215 (304)
T 2ynn_A          173 STPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY  215 (304)
T ss_dssp             SSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEET
T ss_pred             CCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeC
Confidence            33333332  2233445555554   3346788888888887754

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=96.20  E-value=0.51  Score=40.40  Aligned_cols=95  Identities=14%  Similarity=0.136  Sum_probs=61.0

Q ss_pred             EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021         97 LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT  173 (199)
Q Consensus        97 LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta  173 (199)
                      |++|- .++|++|++...+.+..-.-  -...+.++..  .+.+++.|.--..|.++.++.. ..+..+.  ....+|++
T Consensus       311 l~sgs~D~~i~iwd~~~~~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~-~~~~~~~--~h~~~v~~  385 (410)
T 1vyh_C          311 LLSGSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-RCMKTLN--AHEHFVTS  385 (410)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS-CCCEEEE--CCSSCEEE
T ss_pred             EEEEeCCCeEEEEECCCCceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ceEEEEc--CCCCcEEE
Confidence            44333 57899999987664443221  1234666654  4678999988888888766432 2333333  23457889


Q ss_pred             EEEEeC-CeEEEEcCCCcEEEEee
Q psy17021        174 SCVLDY-NTVASADKFGNVCIVST  196 (199)
Q Consensus       174 ~~~Ld~-~t~l~aD~~gNl~vlr~  196 (199)
                      +.+-.+ ..++.+..++.+.++.+
T Consensus       386 l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          386 LDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             EEECSSSSCEEEEETTSEEEEEC-
T ss_pred             EEEcCCCCEEEEEeCCCcEEEEeC
Confidence            988744 46888889999888753

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=96.20  E-value=0.4  Score=40.48  Aligned_cols=113  Identities=11%  Similarity=0.106  Sum_probs=68.8

Q ss_pred             cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeecc----C-cCceEEEE--EEeCCEEEEEeccccEEEEEE
Q psy17021         83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENK----H-LPNLIVKI--ESMGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~----~-~~~~i~~l--~~~~~~IlVGD~~~Sv~ll~y  152 (199)
                      .+++++++.-. +|..++..  ..+|++|++...+.+......    + ....+.++  ...+.++++|..-..+.++. 
T Consensus       248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd-  326 (380)
T 3iz6_a          248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD-  326 (380)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE-
T ss_pred             cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEE-
Confidence            45677776543 34544443  579999999876543322111    0 01123344  34688999998877877764 


Q ss_pred             eCCCCe-EEEEec--cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        153 KRYENQ-LLIFAD--DTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       153 ~~~~~~-l~~var--D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                       ....+ +..+..  .....+++++.+- |...++.+..++++.+..+.
T Consensus       327 -~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~  374 (380)
T 3iz6_a          327 -TLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS  374 (380)
T ss_dssp             -TTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred             -CCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence             33333 333322  3345678888887 44578888999999988764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=96.18  E-value=0.4  Score=39.04  Aligned_cols=92  Identities=5%  Similarity=-0.103  Sum_probs=52.3

Q ss_pred             eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021        101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD  178 (199)
Q Consensus       101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld  178 (199)
                      -.++|++|++...+.+....-.  ...+.++..  .+.+++.|..-..|.+..  ....++...-. ....++.++++-.
T Consensus       206 ~D~~i~iWd~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd--~~~~~~~~~~~-~~~~~~~~~~~~~  280 (304)
T 2ynn_A          206 DDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFHPTLPIIISGSEDGTLKIWN--SSTYKVEKTLN-VGLERSWCIATHP  280 (304)
T ss_dssp             TTSEEEEEETTTTEEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEE--TTTCCEEEEEC-CSSSSEEEEEECT
T ss_pred             CCCeEEEEeCCCCccceeeCCC--CCCEEEEEECCCCCEEEEEcCCCeEEEEE--CCCCceeeecc-CCCccEEEEEECC
Confidence            3689999999877654433221  123555543  467899999888888765  34444433222 2234555666553


Q ss_pred             CC--eEEEEcCCCcEEEEeec
Q psy17021        179 YN--TVASADKFGNVCIVSTY  197 (199)
Q Consensus       179 ~~--t~l~aD~~gNl~vlr~~  197 (199)
                      ++  .++++-.+..+.++.+.
T Consensus       281 ~~~~~~~asg~~~g~~~~~~~  301 (304)
T 2ynn_A          281 TGRKNYIASGFDNGFTVLSLG  301 (304)
T ss_dssp             TCGGGCEEEEETTEEEEEECC
T ss_pred             CCCceEEEEecCCceEEEEec
Confidence            33  34444444455665543

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=96.16  E-value=0.41  Score=38.99  Aligned_cols=95  Identities=6%  Similarity=-0.056  Sum_probs=65.2

Q ss_pred             CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe-EEEEeccCCceeEEEEEEE-
Q psy17021        102 GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ-LLIFADDTQPRWITTSCVL-  177 (199)
Q Consensus       102 g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~-l~~varD~~~~wvta~~~L-  177 (199)
                      ..+|++|++...+.............+.++..  .++++++|+--..+.++.++..... ....-.......++++.+- 
T Consensus        73 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~  152 (372)
T 1k8k_C           73 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP  152 (372)
T ss_dssp             TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred             CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence            57899999977664444332222334666665  4779999999899999988765542 2222223446688898887 


Q ss_pred             eCCeEEEEcCCCcEEEEee
Q psy17021        178 DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       178 d~~t~l~aD~~gNl~vlr~  196 (199)
                      |.+.++.+..++.+.++.+
T Consensus       153 ~~~~l~~~~~dg~i~~~d~  171 (372)
T 1k8k_C          153 NSVLLAAGSCDFKCRIFSA  171 (372)
T ss_dssp             TSSEEEEEETTSCEEEEEC
T ss_pred             CCCEEEEEcCCCCEEEEEc
Confidence            4457888899999998873

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=96.12  E-value=0.21  Score=43.03  Aligned_cols=111  Identities=13%  Similarity=0.044  Sum_probs=70.2

Q ss_pred             cCCcceEEcc--ccCeEEEEe--CCEEEEEEcCCc---ceeeeeeccCcCceEEEEEEe--CC-EEEEEeccccEEEEEE
Q psy17021         83 VDEVPYAMCP--FQGALLVGV--GRYLRLYDLGKK---KLLRKCENKHLPNLIVKIESM--GH-RIYVSDVQESVFLVRY  152 (199)
Q Consensus        83 ~kG~v~aL~~--f~g~LLaav--g~~v~vy~l~~~---~Ll~~~~~~~~~~~i~~l~~~--~~-~IlVGD~~~Sv~ll~y  152 (199)
                      ..+.+.++.-  ..+.++++.  .++|++|++...   +.....  ......+.++...  +. ++++|..-..|.++.+
T Consensus       230 h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~  307 (430)
T 2xyi_A          230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSADKTVALWDL  307 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred             CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence            3445666543  345565443  689999999754   222221  1122346666653  43 7889999888988877


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeec
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTY  197 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~  197 (199)
                      +.....+..+..  ...+++++++-.++  .++.+..++.+.++.+.
T Consensus       308 ~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~  352 (430)
T 2xyi_A          308 RNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS  352 (430)
T ss_dssp             TCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred             CCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence            653443444433  35688899888544  47788888999888764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=96.09  E-value=0.27  Score=40.62  Aligned_cols=79  Identities=10%  Similarity=0.100  Sum_probs=47.5

Q ss_pred             cCCcceEEccc-cC-eEEEEeCCEEEEEEcCCcceeee-eecc--CcC--ceEEEEEEeCCEEEEEec-cccEEEEEEeC
Q psy17021         83 VDEVPYAMCPF-QG-ALLVGVGRYLRLYDLGKKKLLRK-CENK--HLP--NLIVKIESMGHRIYVSDV-QESVFLVRYKR  154 (199)
Q Consensus        83 ~kG~v~aL~~f-~g-~LLaavg~~v~vy~l~~~~Ll~~-~~~~--~~~--~~i~~l~~~~~~IlVGD~-~~Sv~ll~y~~  154 (199)
                      -.++++++.-- +| .|++|-..+|++|++.+.+.... ..+.  ..+  ......+..+.++++|.. -.++.++.|+.
T Consensus       213 h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~  292 (343)
T 3lrv_A          213 EEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK  292 (343)
T ss_dssp             TTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence            36777776532 34 46666677999999976543221 1110  011  112344445789999777 77899999976


Q ss_pred             CCCeEEE
Q psy17021        155 YENQLLI  161 (199)
Q Consensus       155 ~~~~l~~  161 (199)
                      ......+
T Consensus       293 ~~~~~~~  299 (343)
T 3lrv_A          293 KTKNWTK  299 (343)
T ss_dssp             TTCSEEE
T ss_pred             cccceEe
Confidence            6655544

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=96.04  E-value=0.43  Score=39.43  Aligned_cols=113  Identities=8%  Similarity=-0.006  Sum_probs=71.6

Q ss_pred             cCCcceEEccccCeEEEEe-CCEEEEEEcCCcc------eeeeeeccCcCceEEEEE--Ee----C---CEEEEEecccc
Q psy17021         83 VDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKK------LLRKCENKHLPNLIVKIE--SM----G---HRIYVSDVQES  146 (199)
Q Consensus        83 ~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~------Ll~~~~~~~~~~~i~~l~--~~----~---~~IlVGD~~~S  146 (199)
                      -++++++++--.+.|++|- ..+|++|++...+      +......  ....+.++.  ..    +   ++++.|..-..
T Consensus        15 h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~   92 (397)
T 1sq9_A           15 HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV--HKSGLHHVDVLQAIERDAFELCLVATTSFSGD   92 (397)
T ss_dssp             SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC--CTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred             hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEec--CCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence            4566777654445555444 5799999997655      3332221  122355444  45    7   89999999899


Q ss_pred             EEEEEEeCCCC--e--EEEEeccCC---ceeEEEEEEE-----eCCe-EEEEcCCCcEEEEeec
Q psy17021        147 VFLVRYKRYEN--Q--LLIFADDTQ---PRWITTSCVL-----DYNT-VASADKFGNVCIVSTY  197 (199)
Q Consensus       147 v~ll~y~~~~~--~--l~~varD~~---~~wvta~~~L-----d~~t-~l~aD~~gNl~vlr~~  197 (199)
                      |.++.....+.  .  +..+.....   ...++++.+.     |.+. ++.+..+|.+.++.+.
T Consensus        93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~  156 (397)
T 1sq9_A           93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFH  156 (397)
T ss_dssp             EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEE
T ss_pred             EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCC
Confidence            99998865432  1  333332211   3688889888     4456 8888999999998764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=95.98  E-value=0.55  Score=43.08  Aligned_cols=174  Identities=10%  Similarity=0.040  Sum_probs=95.6

Q ss_pred             eecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECC-----------eeeEEE-ee
Q psy17021         15 AMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGN-----------AMEFVH-KT   81 (199)
Q Consensus        15 ~~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgd-----------klesVh-~~   81 (199)
                      ++.+-+..|++|.. +.+++||+...+.++.-+..   +..++ -+.+.. .+..+++|.           ..+.+. ..
T Consensus        20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~---~~~v~-~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~   94 (814)
T 3mkq_A           20 DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT---ETPVR-AGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFE   94 (814)
T ss_dssp             EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC---SSCEE-EEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             EECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC---CCcEE-EEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence            44455566777664 68999998776665543321   12221 111111 123344431           112222 22


Q ss_pred             ccCCcceEEccc-cC-eEEEEe-CCEEEEEEcCCc-ceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021         82 SVDEVPYAMCPF-QG-ALLVGV-GRYLRLYDLGKK-KLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ...+++++++-- +| .|++|- .+++++|++... .+.... .. ....+.++.-   .++.+++|..-.+|.++....
T Consensus        95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~-~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~  172 (814)
T 3mkq_A           95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EG-HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ  172 (814)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-EC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred             cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cC-CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence            355677776543 24 455444 579999999765 332222 11 2334666665   356889999888888776543


Q ss_pred             CCCeEEEEeccCCceeEEEEEEE---eCCeEEEEcCCCcEEEEeec
Q psy17021        155 YENQLLIFADDTQPRWITTSCVL---DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~L---d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ........  ......++++.+-   |...++.+..+|.+.++...
T Consensus       173 ~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~  216 (814)
T 3mkq_A          173 STPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ  216 (814)
T ss_dssp             SSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred             CcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence            33333332  2233455556665   44578888889998887643

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=95.97  E-value=0.63  Score=39.41  Aligned_cols=109  Identities=16%  Similarity=0.158  Sum_probs=69.3

Q ss_pred             cCCcceEEccc-cC-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021         83 VDEVPYAMCPF-QG-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        83 ~kG~v~aL~~f-~g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      .+++++++.-. +| .|+.| -..++++|++...+........   ..+..+..   .++++++|..-..|.++.  ...
T Consensus       164 h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd--~~~  238 (393)
T 1erj_A          164 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWD--SET  238 (393)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEE--TTT
T ss_pred             CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEE--CCC
Confidence            45677776543 23 45544 3689999999876644433332   23455554   467999999888887764  333


Q ss_pred             CeEEE-Eec-----cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        157 NQLLI-FAD-----DTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~~-var-----D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      +++.. +..     .....+++++.+- |...++.+..++.+.++.+
T Consensus       239 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~  285 (393)
T 1erj_A          239 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL  285 (393)
T ss_dssp             CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            33322 211     2345689999987 4457888889999988764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=95.97  E-value=0.54  Score=38.62  Aligned_cols=90  Identities=9%  Similarity=0.080  Sum_probs=53.0

Q ss_pred             EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe-EEEEeccCCceeEEEEEE
Q psy17021        100 GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ-LLIFADDTQPRWITTSCV  176 (199)
Q Consensus       100 avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~-l~~varD~~~~wvta~~~  176 (199)
                      +-.++|++|++...++...  +..-...+.++..  .+.+++.|..-..|.+....  ..+ +..+..   +..++++.+
T Consensus       173 ~~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~---~~~v~~~~~  245 (319)
T 3frx_A          173 GNDKMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA--AKKAMYTLSA---QDEVFSLAF  245 (319)
T ss_dssp             ETTSCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT--TTEEEEEEEC---CSCEEEEEE
T ss_pred             eCCCEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCcEEEEecC---CCcEEEEEE
Confidence            3468899999987664332  2111233566654  46799999888888776543  333 333322   346788888


Q ss_pred             EeCCeEEEEcCCCcEEEEee
Q psy17021        177 LDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       177 Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      -.+..++.+-....+.++.+
T Consensus       246 sp~~~~la~~~~~~i~v~~~  265 (319)
T 3frx_A          246 SPNRYWLAAATATGIKVFSL  265 (319)
T ss_dssp             CSSSSEEEEEETTEEEEEEE
T ss_pred             cCCCCEEEEEcCCCcEEEEe
Confidence            75554444333445666554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=95.89  E-value=0.52  Score=37.79  Aligned_cols=103  Identities=9%  Similarity=-0.002  Sum_probs=57.2

Q ss_pred             eEEEEe--CCEEEEEEcCC--ccee--eeee-ccC---cCceEEEEEE--eCCEEEEEecc-ccEEEEEEeCCCCeEEEE
Q psy17021         96 ALLVGV--GRYLRLYDLGK--KKLL--RKCE-NKH---LPNLIVKIES--MGHRIYVSDVQ-ESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        96 ~LLaav--g~~v~vy~l~~--~~Ll--~~~~-~~~---~~~~i~~l~~--~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~v  162 (199)
                      .++++-  ++++.+|++..  .++.  .... ...   ....+..+..  .++++++++-. ..+.++..+...+++..+
T Consensus       191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~  270 (343)
T 1ri6_A          191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE  270 (343)
T ss_dssp             EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred             EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence            465553  58899999953  2221  1111 110   0123445554  36688877754 467777776445555554


Q ss_pred             eccCCceeEEEEEEE-eCCeEEEEc-CCCcEEEEeecC
Q psy17021        163 ADDTQPRWITTSCVL-DYNTVASAD-KFGNVCIVSTYR  198 (199)
Q Consensus       163 arD~~~~wvta~~~L-d~~t~l~aD-~~gNl~vlr~~~  198 (199)
                      ..-.....++++.+- |.+.+++++ .++.+.++++++
T Consensus       271 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~  308 (343)
T 1ri6_A          271 GFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  308 (343)
T ss_dssp             EEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             eeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            432222235566665 344566666 568888887764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=95.88  E-value=0.37  Score=38.88  Aligned_cols=124  Identities=12%  Similarity=0.008  Sum_probs=82.0

Q ss_pred             eeEECCeeeEEEeeccCCcceEEccc-cCeE-EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEe
Q psy17021         68 DRLVGNAMEFVHKTSVDEVPYAMCPF-QGAL-LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSD  142 (199)
Q Consensus        68 ri~vgdklesVh~~~~kG~v~aL~~f-~g~L-Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD  142 (199)
                      +-..|...+.+....-++++++++-- +|++ ++|- +..|++|++...+.+.....  ....+.++..  .+++++.|.
T Consensus        16 ~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~   93 (369)
T 3zwl_B           16 LYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKYCVTGS   93 (369)
T ss_dssp             CCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEE
T ss_pred             eEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCEEEEEe
Confidence            33467778888888888999887533 3454 4433 67899999987765443322  1234666665  477999998


Q ss_pred             ccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCC-----CcEEEEeec
Q psy17021        143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASADKF-----GNVCIVSTY  197 (199)
Q Consensus       143 ~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~-----gNl~vlr~~  197 (199)
                      .-..+.++..  ..++......  .+..++++.+-.+ ..++++..+     +++.++.+.
T Consensus        94 ~dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~  150 (369)
T 3zwl_B           94 ADYSIKLWDV--SNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE  150 (369)
T ss_dssp             TTTEEEEEET--TTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred             CCCeEEEEEC--CCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence            8777777654  3444433333  5667888888744 467777777     888888654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=95.86  E-value=0.51  Score=45.91  Aligned_cols=104  Identities=13%  Similarity=0.100  Sum_probs=69.7

Q ss_pred             EccccCeEEEEeCCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021         90 MCPFQGALLVGVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP  168 (199)
Q Consensus        90 L~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~  168 (199)
                      +.|-...++++.++.+.+|++...+.+...... ............++++++|+.-.++.++..  ..++...... ...
T Consensus       806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~--~~~~~~~~~~-~h~  882 (1249)
T 3sfz_A          806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNI--DSRLKVADCR-GHL  882 (1249)
T ss_dssp             BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEET--TTTEEEEEEC-CCS
T ss_pred             ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCceeeecC-CCc
Confidence            334334677888999999999877655443322 122223344446889999999888887755  4444443333 356


Q ss_pred             eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        169 RWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      .+++++.+- |...++.+..++.+.++..
T Consensus       883 ~~v~~v~~spdg~~l~s~s~dg~v~vw~~  911 (1249)
T 3sfz_A          883 SWVHGVMFSPDGSSFLTASDDQTIRVWET  911 (1249)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred             cceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            689999988 4457888899999988864

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=95.81  E-value=0.37  Score=39.79  Aligned_cols=113  Identities=5%  Similarity=-0.102  Sum_probs=66.2

Q ss_pred             ccCCcceEEccc---cCeEEE--EeCCEEEEEEcCCcceeeeeecc-CcCceEEEEEEeCCEEEEEeccccEEEEEEeCC
Q psy17021         82 SVDEVPYAMCPF---QGALLV--GVGRYLRLYDLGKKKLLRKCENK-HLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        82 ~~kG~v~aL~~f---~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~-~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      ...++++++.--   .|..++  +..+++++|++...+........ ..+.........+.++++|..-..|.++..+..
T Consensus       123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~  202 (343)
T 3lrv_A          123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP  202 (343)
T ss_dssp             CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred             CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence            344678776543   344443  34689999999877654332221 112223333445789999998889988866543


Q ss_pred             CCeEEEEeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEee
Q psy17021        156 ENQLLIFADDTQPRWITTSCVLDYN-TVASADKFGNVCIVST  196 (199)
Q Consensus       156 ~~~l~~varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr~  196 (199)
                      ......+.. ....+++++.|-.++ .++.+. ++.+.++.+
T Consensus       203 ~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~  242 (343)
T 3lrv_A          203 DQASSRFPV-DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL  242 (343)
T ss_dssp             TSCCEECCC-CTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred             CCCccEEec-cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence            322123322 245689999998555 444444 447777643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=95.78  E-value=0.65  Score=38.13  Aligned_cols=172  Identities=13%  Similarity=0.051  Sum_probs=89.2

Q ss_pred             CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceee------eeEEE-EEc-CceeEE-CCeeeEEEeeccCCc----
Q psy17021         20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKA------HQTHT-HSG-RSDRLV-GNAMEFVHKTSVDEV----   86 (199)
Q Consensus        20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~------~~~~~-~~~-~~ri~v-gdklesVh~~~~kG~----   86 (199)
                      +|++++.-.+.+..||. ..+++.+-....  ...+..      .-.+. ..+ +.|+++ ...=+.+....+.+.    
T Consensus        47 dG~ilvs~~~~V~~~d~-~G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~  123 (276)
T 3no2_A           47 AGEILFSYSKGAKMITR-DGRELWNIAAPA--GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERP  123 (276)
T ss_dssp             TSCEEEECBSEEEEECT-TSCEEEEEECCT--TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSG
T ss_pred             CCCEEEeCCCCEEEECC-CCCEEEEEcCCC--CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcc
Confidence            78999977788999998 666777554320  001100      00011 111 233322 111112222222211    


Q ss_pred             ---ceEEc-cccCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCC-CCeE
Q psy17021         87 ---PYAMC-PFQGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRY-ENQL  159 (199)
Q Consensus        87 ---v~aL~-~f~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~-~~~l  159 (199)
                         +..+. .-+|.++++.  +++|..|+.. .+++.+.... ...+.......++ ++|++...+ .+..|+++ .+.+
T Consensus       124 ~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~-~v~~~d~~tG~~~  199 (276)
T 3no2_A          124 HAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD-CLVACGDAH-CFVQLNLESNRIV  199 (276)
T ss_dssp             GGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC-EEEECBTTS-EEEEECTTTCCEE
T ss_pred             cccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC-EEEEeCCCC-eEEEEeCcCCcEE
Confidence               11111 1256666655  5789999987 4444443332 1222222222344 556666555 47888988 4555


Q ss_pred             EEEecc----CCceeEEEEEEEeCCeEEEEcCCC---------cEEEEeecC
Q psy17021        160 LIFADD----TQPRWITTSCVLDYNTVASADKFG---------NVCIVSTYR  198 (199)
Q Consensus       160 ~~varD----~~~~wvta~~~Ld~~t~l~aD~~g---------Nl~vlr~~~  198 (199)
                      -++.+.    ..-.|++++..+.+..+++++..|         +..++++++
T Consensus       200 w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~  251 (276)
T 3no2_A          200 RRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS  251 (276)
T ss_dssp             EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred             EEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence            666542    134689999999777777777443         335666654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=95.78  E-value=0.93  Score=42.38  Aligned_cols=116  Identities=9%  Similarity=0.030  Sum_probs=74.2

Q ss_pred             ccCCcceEEcccc---Ce-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEE
Q psy17021         82 SVDEVPYAMCPFQ---GA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVS  141 (199)
Q Consensus        82 ~~kG~v~aL~~f~---g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVG  141 (199)
                      ...++++++.--.   |. +++|- +++|++|++..............+..+.++...               ++++++|
T Consensus        97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg  176 (753)
T 3jro_A           97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG  176 (753)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred             CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence            3556777765432   44 44333 589999999765322222222223346666643               5789999


Q ss_pred             eccccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021        142 DVQESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       142 D~~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~  197 (199)
                      ..-..|.++...........+. -......++++.+-.+    ..++.+..+|.+.++...
T Consensus       177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~  237 (753)
T 3jro_A          177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD  237 (753)
T ss_dssp             ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred             ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence            9999999998876554333322 1234567889988844    468888999999988654

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=95.70  E-value=0.77  Score=38.39  Aligned_cols=108  Identities=10%  Similarity=0.065  Sum_probs=67.0

Q ss_pred             CCcceEEccc--cCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE----eCCEEEEEeccccEEEEEEeCCC
Q psy17021         84 DEVPYAMCPF--QGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES----MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        84 kG~v~aL~~f--~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~----~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      .+.++++.--  ...|+.|- .++|++|++...+++..-.-.  ...+.++..    .+++++.|..-..|.++..  ..
T Consensus       154 ~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~--~~  229 (354)
T 2pbi_B          154 TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH--GADVLCLDLAPSETGNTFVSGGCDKKAMVWDM--RS  229 (354)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECCCSSCCEEEEEETTSCEEEEET--TT
T ss_pred             CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC--CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC--CC
Confidence            3445554322  23565444 689999999887765433221  123555543    3579999998888877654  33


Q ss_pred             CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        157 NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ++....- .....+++++.+- |.+.++.+..++.+.++.+
T Consensus       230 ~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~  269 (354)
T 2pbi_B          230 GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDL  269 (354)
T ss_dssp             CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            3333222 2345688888887 4557888888898888754

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=95.66  E-value=0.14  Score=48.09  Aligned_cols=102  Identities=5%  Similarity=0.069  Sum_probs=64.6

Q ss_pred             eEEEEe-CCEEEEEEcCCcc--eeeeeeccCcCceEEEEEEe-----CCEEEEEeccccEEEEEEeCCCCeE--EEEecc
Q psy17021         96 ALLVGV-GRYLRLYDLGKKK--LLRKCENKHLPNLIVKIESM-----GHRIYVSDVQESVFLVRYKRYENQL--LIFADD  165 (199)
Q Consensus        96 ~LLaav-g~~v~vy~l~~~~--Ll~~~~~~~~~~~i~~l~~~-----~~~IlVGD~~~Sv~ll~y~~~~~~l--~~varD  165 (199)
                      .+++|- .++|++|++....  .............+.++...     +++++.|+.-..+.++.........  ......
T Consensus       172 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~  251 (753)
T 3jro_A          172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE  251 (753)
T ss_dssp             CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSS
T ss_pred             EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccC
Confidence            344443 6889999996542  11112222122347777654     6789999999999998876543211  222223


Q ss_pred             CCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        166 TQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       166 ~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ..+.+++++.+- |...++.+..+|.+.++.+.
T Consensus       252 ~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~  284 (753)
T 3jro_A          252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (753)
T ss_dssp             CCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred             CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence            356678888886 44468888899999988765

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=95.66  E-value=0.66  Score=37.34  Aligned_cols=111  Identities=12%  Similarity=0.139  Sum_probs=64.1

Q ss_pred             cCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..+++.++.-- +|. +++| -.+.|++|++...+.+...... ....+..+.  ..++++++|..-..+.++.+.  ..
T Consensus       148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~  224 (312)
T 4ery_A          148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYS--KG  224 (312)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETT--TT
T ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECC--CC
Confidence            34566665432 344 4433 3678999999877654433222 122344444  357799999988888777553  33


Q ss_pred             e-EEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEee
Q psy17021        158 Q-LLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       158 ~-l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~  196 (199)
                      + +..+.......+.....+-  +...++.+..+|.+.++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~  266 (312)
T 4ery_A          225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL  266 (312)
T ss_dssp             EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred             cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence            3 3333333334443333332  3346778888899888764

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=95.62  E-value=0.78  Score=37.88  Aligned_cols=102  Identities=10%  Similarity=0.008  Sum_probs=58.5

Q ss_pred             EEccccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021         89 AMCPFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADD  165 (199)
Q Consensus        89 aL~~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD  165 (199)
                      .+.|+...++++ -.++|++|+...+ ....  +......+.++.-  .+++++.|..-..|.++...........+.. 
T Consensus       179 ~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~--~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~-  254 (343)
T 2xzm_R          179 KVQPFAPYFASVGWDGRLKVWNTNFQ-IRYT--FKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA-  254 (343)
T ss_dssp             CCCSSCCEEEEEETTSEEEEEETTTE-EEEE--EECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC-
T ss_pred             ccCCCCCEEEEEcCCCEEEEEcCCCc-eeEE--EcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC-
Confidence            344555555543 4789999995433 2221  1111234566654  5779999998888888765332222233322 


Q ss_pred             CCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        166 TQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                        ...++++.+-.+..++.+-.++.+.++.+
T Consensus       255 --~~~v~~v~~sp~~~~la~~~d~~v~iw~~  283 (343)
T 2xzm_R          255 --GSTINQIAFNPKLQWVAVGTDQGVKIFNL  283 (343)
T ss_dssp             --SSCEEEEEECSSSCEEEEEESSCEEEEES
T ss_pred             --CCcEEEEEECCCCCEEEEECCCCEEEEEe
Confidence              22477888765555555555666777654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=95.61  E-value=0.17  Score=42.21  Aligned_cols=110  Identities=14%  Similarity=0.135  Sum_probs=67.8

Q ss_pred             CCcceEEcccc--Ce-EEEEeCC----EEEEEEcCCc-ceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEE
Q psy17021         84 DEVPYAMCPFQ--GA-LLVGVGR----YLRLYDLGKK-KLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        84 kG~v~aL~~f~--g~-LLaavg~----~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y  152 (199)
                      +++++++.--.  +. ++++-..    +|++|++... +.+..-.. .....+.++..   .+++++.|..-..+.++..
T Consensus       214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~  292 (416)
T 2pm9_A          214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP  292 (416)
T ss_dssp             CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS-CCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred             CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec-CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence            56677665443  23 4444443    8999999764 33222210 12234677765   4678999988778777654


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEEeC--CeEEEEcCCCcEEEEeec
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVLDY--NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~Ld~--~t~l~aD~~gNl~vlr~~  197 (199)
                      +. ...+..+.  ....+++++.+-.+  ..++.+..++.+.++.++
T Consensus       293 ~~-~~~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~  336 (416)
T 2pm9_A          293 ES-AEQLSQFP--ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ  336 (416)
T ss_dssp             SS-CCEEEEEE--CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred             CC-Cccceeec--CCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence            32 23333333  23457888888754  468888889999998764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=95.60  E-value=1.1  Score=39.28  Aligned_cols=109  Identities=13%  Similarity=0.095  Sum_probs=68.1

Q ss_pred             ccCCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021         82 SVDEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ...++++++.-- +++ |+.| -++++++|+...+.+.......   ..+.++..  .+.+++.|..-..|.+.  +...
T Consensus       424 ~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~---~~v~~~~~spd~~~las~~~d~~i~iw--~~~~  498 (577)
T 2ymu_A          424 GHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDKTVKLW--NRNG  498 (577)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCS---SCEEEEEECTTSCEEEEEETTSEEEEE--ETTS
T ss_pred             CCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCC---CCEEEEEEcCCCCEEEEEeCCCEEEEE--cCCC
Confidence            345666665422 344 4433 3688999998655443322222   23555554  56789999887777775  4444


Q ss_pred             CeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        157 NQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ..+..+..  ....++++++- |...++.+..++.+.++.++
T Consensus       499 ~~~~~~~~--h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~  538 (577)
T 2ymu_A          499 QLLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN  538 (577)
T ss_dssp             CEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred             CEEEEEeC--CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence            55555443  34578999987 44468888999999988654

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=95.50  E-value=0.75  Score=36.86  Aligned_cols=111  Identities=13%  Similarity=0.035  Sum_probs=61.9

Q ss_pred             ccCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEEeCCCC
Q psy17021         82 SVDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..++++++++-- +|+++++  -.+++++|++...+.+.....   +..+..+... ++.+++|-.-.++.++.  .+..
T Consensus       213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~d~~i~iwd--~~~~  287 (340)
T 4aow_A          213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---GDIINALCFSPNRYWLCAATGPSIKIWD--LEGK  287 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC---SSCEEEEEECSSSSEEEEEETTEEEEEE--TTTT
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC---CceEEeeecCCCCceeeccCCCEEEEEE--CCCC
Confidence            456778876532 3555443  358999999987765443222   2334444432 22333433334444432  2222


Q ss_pred             eE--------EEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 QL--------LIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ~l--------~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .+        ........+.+|+++.+- |...++.+..+|.|.+.++.
T Consensus       288 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~  336 (340)
T 4aow_A          288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT  336 (340)
T ss_dssp             EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence            22        222234567789999887 44578888999999998763

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=95.47  E-value=0.99  Score=38.10  Aligned_cols=112  Identities=14%  Similarity=0.005  Sum_probs=67.8

Q ss_pred             CCcceEEccc---cCeE-EEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021         84 DEVPYAMCPF---QGAL-LVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        84 kG~v~aL~~f---~g~L-Laav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ++.+.++..+   .+.+ ++|- .++|++|++...+.+...........+.++..  .++++++|..-..+.++..+  .
T Consensus       168 ~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~--~  245 (437)
T 3gre_A          168 NEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR--F  245 (437)
T ss_dssp             CCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT--T
T ss_pred             ccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC--C
Confidence            3444444433   2544 4333 58999999987765444332101234666665  57899999998888887553  3


Q ss_pred             CeEEEEeccCCceeEEEEEEE-e----CCeEEEEcCCCcEEEEeec
Q psy17021        157 NQLLIFADDTQPRWITTSCVL-D----YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~L-d----~~t~l~aD~~gNl~vlr~~  197 (199)
                      ++....-+-.....++++.+- .    ...++.+..++.+.++.+.
T Consensus       246 ~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~  291 (437)
T 3gre_A          246 NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV  291 (437)
T ss_dssp             TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred             ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence            444433332334577887554 2    2268888888888887653

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=95.45  E-value=0.87  Score=37.33  Aligned_cols=110  Identities=8%  Similarity=0.054  Sum_probs=67.7

Q ss_pred             ccCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021         82 SVDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ...+++++++-- +|++||.  -.++|++|++...+.+..-...   ..+.++.-  .+.++++|+ ..++.++.+++  
T Consensus       194 ~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~--  267 (319)
T 3frx_A          194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---DEVFSLAFSPNRYWLAAAT-ATGIKVFSLDP--  267 (319)
T ss_dssp             CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---SCEEEEEECSSSSEEEEEE-TTEEEEEEETT--
T ss_pred             CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CcEEEEEEcCCCCEEEEEc-CCCcEEEEeCc--
Confidence            445677776533 3555543  3579999999887755443332   23555554  466777776 45677766642  


Q ss_pred             CeEE-EEeccC------CceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        157 NQLL-IFADDT------QPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       157 ~~l~-~varD~------~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ..+. .+...+      ...+++++++- |...++.+..++.|.+..+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~  316 (319)
T 3frx_A          268 QYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM  316 (319)
T ss_dssp             EEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             CeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence            2222 222111      24578888887 44578889999999998764

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=95.41  E-value=0.96  Score=37.96  Aligned_cols=112  Identities=10%  Similarity=0.066  Sum_probs=66.1

Q ss_pred             cCCcceEEccccC--eEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCC
Q psy17021         83 VDEVPYAMCPFQG--ALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        83 ~kG~v~aL~~f~g--~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ..++++++.--.+  .++++  -..+|++|++...+.+...........+.++..  .++++++|..-..+.++.  ...
T Consensus       130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd--~~~  207 (402)
T 2aq5_A          130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE--PRK  207 (402)
T ss_dssp             CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE--TTT
T ss_pred             CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe--CCC
Confidence            3455666543322  34433  368899999987765443310212334667665  477899998777776664  344


Q ss_pred             CeEE-EEeccCCceeEEEEEEEeCCeEE-EE---cCCCcEEEEee
Q psy17021        157 NQLL-IFADDTQPRWITTSCVLDYNTVA-SA---DKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~-~varD~~~~wvta~~~Ld~~t~l-~a---D~~gNl~vlr~  196 (199)
                      ++.. .+...+....++++.+..++.++ .+   ..++.+.++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~  252 (402)
T 2aq5_A          208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT  252 (402)
T ss_dssp             TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred             CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence            4443 33244544457777777556544 44   57788877754

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=95.40  E-value=1.3  Score=40.65  Aligned_cols=107  Identities=5%  Similarity=-0.085  Sum_probs=62.0

Q ss_pred             CcceEEccc---cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         85 EVPYAMCPF---QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        85 G~v~aL~~f---~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      +++.++.-.   +|..++..  +++|++|++...+.+......  ...+.++..  .++++++|..-.++.++..  ...
T Consensus       185 ~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~--~~~  260 (814)
T 3mkq_A          185 RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFHPTLPIIISGSEDGTLKIWNS--STY  260 (814)
T ss_dssp             TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEET--TTC
T ss_pred             CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCC
Confidence            555554433   45444433  578999999877654433221  123555554  5678999998888877643  443


Q ss_pred             eE-EEEeccCCceeEEEEEEEeCCe--EEEEcCCCcEEEEeec
Q psy17021        158 QL-LIFADDTQPRWITTSCVLDYNT--VASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ~l-~~varD~~~~wvta~~~Ld~~t--~l~aD~~gNl~vlr~~  197 (199)
                      +. ..+...  ...++++.+-.++.  ++.+..++.+.+++..
T Consensus       261 ~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (814)
T 3mkq_A          261 KVEKTLNVG--LERSWCIATHPTGRKNYIASGFDNGFTVLSLG  301 (814)
T ss_dssp             SEEEEECCS--SSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred             cEEEEeecC--CCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence            33 333322  34566666654432  5666667777776643

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=95.39  E-value=1.5  Score=39.63  Aligned_cols=96  Identities=14%  Similarity=0.110  Sum_probs=63.8

Q ss_pred             eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEE
Q psy17021         96 ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSC  175 (199)
Q Consensus        96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~  175 (199)
                      .++++..+.+.+|+-++  + ...... .....+.....+.++++|..-..|.++..+.  +.+.++..-..+.+++++.
T Consensus       425 ~~~~~~~~~v~~~~~~~--~-~~~~~~-~~v~~va~spdg~~lasgs~D~~v~lwd~~~--~~~~~~~~~~h~~~v~~v~  498 (611)
T 1nr0_A          425 IAVAACYKHIAIYSHGK--L-TEVPIS-YNSSCVALSNDKQFVAVGGQDSKVHVYKLSG--ASVSEVKTIVHPAEITSVA  498 (611)
T ss_dssp             CEEEEESSEEEEEETTE--E-EEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEEEET--TEEEEEEEEECSSCEEEEE
T ss_pred             EEEEEeCceEEEEeCCc--e-eeeecC-CCceEEEEeCCCCEEEEeCCCCeEEEEEccC--CceeeeeccCCCCceEEEE
Confidence            67777888999998432  3 222222 2222333334578999999888888887753  4444433334567899999


Q ss_pred             EE-eCCeEEEEcCCCcEEEEeec
Q psy17021        176 VL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       176 ~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      |- |...++.++.++.+.++...
T Consensus       499 fspdg~~las~s~d~~v~~w~~~  521 (611)
T 1nr0_A          499 FSNNGAFLVATDQSRKVIPYSVA  521 (611)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEGG
T ss_pred             ECCCCCEEEEEcCCCCEEEEEcC
Confidence            97 44578888999999888654

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=95.38  E-value=1.1  Score=38.19  Aligned_cols=110  Identities=10%  Similarity=0.086  Sum_probs=65.9

Q ss_pred             cCCcceEEccc-cCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----------------------CCE
Q psy17021         83 VDEVPYAMCPF-QGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----------------------GHR  137 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----------------------~~~  137 (199)
                      ..+.+.++..- +|.++++  -.++|++|++...+....  +......+.++.-.                      +.+
T Consensus       233 h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  310 (410)
T 1vyh_C          233 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF  310 (410)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE
T ss_pred             CCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE
Confidence            34456665543 3455543  358999999976654322  21112234444432                      568


Q ss_pred             EEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021        138 IYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       138 IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~~  197 (199)
                      ++.|.--.+|.++..  ..++....-. ....|++++.+-.+ ..++.+..++.+.++.+.
T Consensus       311 l~sgs~D~~i~iwd~--~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~  368 (410)
T 1vyh_C          311 LLSGSRDKTIKMWDV--STGMCLMTLV-GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK  368 (410)
T ss_dssp             EEEEETTSEEEEEET--TTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred             EEEEeCCCeEEEEEC--CCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence            888888777777654  3333322222 24568999988743 468888899999888653

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=95.34  E-value=1  Score=37.38  Aligned_cols=101  Identities=9%  Similarity=0.028  Sum_probs=63.5

Q ss_pred             eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC-eEEEEeccCCceeE
Q psy17021         96 ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN-QLLIFADDTQPRWI  171 (199)
Q Consensus        96 ~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~-~l~~varD~~~~wv  171 (199)
                      .|+.| ..+++++|++...+.........-...|.++.-  .+++++.|..-.++.+...+.... .....- ......+
T Consensus        75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v  153 (345)
T 3fm0_A           75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDV  153 (345)
T ss_dssp             EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCE
T ss_pred             EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCe
Confidence            34433 368899999976543222233311234666665  478999999999999988765433 222222 2334568


Q ss_pred             EEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        172 TTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       172 ta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +++.+- |.+.++.+..++.+.++...
T Consensus       154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~  180 (345)
T 3fm0_A          154 KHVVWHPSQELLASASYDDTVKLYREE  180 (345)
T ss_dssp             EEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred             EEEEECCCCCEEEEEeCCCcEEEEEec
Confidence            888887 44578888888988887653

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=95.25  E-value=0.91  Score=36.32  Aligned_cols=121  Identities=11%  Similarity=0.087  Sum_probs=61.2

Q ss_pred             eeEEEeeccCCcceEEccc-cCe-EEEEe--CCEEEEEEcC---CcceeeeeeccCcCceEEEEEEeCCEEEEEec-ccc
Q psy17021         75 MEFVHKTSVDEVPYAMCPF-QGA-LLVGV--GRYLRLYDLG---KKKLLRKCENKHLPNLIVKIESMGHRIYVSDV-QES  146 (199)
Q Consensus        75 lesVh~~~~kG~v~aL~~f-~g~-LLaav--g~~v~vy~l~---~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~-~~S  146 (199)
                      ++.+......+.+.++.-- +|+ |+++-  ++++.+|++.   ..+........ .......+...++++++++. -..
T Consensus        74 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~  152 (343)
T 1ri6_A           74 LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDR  152 (343)
T ss_dssp             EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTE
T ss_pred             eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCE
Confidence            3334444444555544322 344 65554  5789999993   22232222211 11122233345678999994 456


Q ss_pred             EEEEEEeCCCCeEEEEe----ccCCceeEEEEEEEeCC-eEEEEc-CCCcEEEEeec
Q psy17021        147 VFLVRYKRYENQLLIFA----DDTQPRWITTSCVLDYN-TVASAD-KFGNVCIVSTY  197 (199)
Q Consensus       147 v~ll~y~~~~~~l~~va----rD~~~~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~~  197 (199)
                      +.++..+. .+++..+.    .......+.++.+-.++ .+++++ .++.+.++.++
T Consensus       153 v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~  208 (343)
T 1ri6_A          153 ICLFTVSD-DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK  208 (343)
T ss_dssp             EEEEEECT-TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred             EEEEEecC-CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence            66665543 24444322    11222355566665333 455554 67788888764

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=95.23  E-value=0.15  Score=43.90  Aligned_cols=100  Identities=10%  Similarity=0.120  Sum_probs=61.0

Q ss_pred             cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021         94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYKRYENQLLIFADDTQP  168 (199)
Q Consensus        94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~  168 (199)
                      +|.++++.  .++|++|++..+.+......   ...|.++...  + .+++.|..-.+|.++..+.....-.........
T Consensus       220 ~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h---~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~  296 (435)
T 4e54_B          220 SSRMVVTGDNVGNVILLNMDGKELWNLRMH---KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR  296 (435)
T ss_dssp             TTTEEEEECSSSBEEEEESSSCBCCCSBCC---SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS
T ss_pred             CCCEEEEEeCCCcEeeeccCcceeEEEecc---cceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecc
Confidence            34444433  47899999976654322212   2247777653  3 477788777778776543322221222223345


Q ss_pred             eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        169 RWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      .+|+++.+- |...++.+..+|.|.++..
T Consensus       297 ~~v~~~~~spdg~~l~s~~~D~~i~iwd~  325 (435)
T 4e54_B          297 HPVNAACFSPDGARLLTTDQKSEIRVYSA  325 (435)
T ss_dssp             SCEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred             ccccceeECCCCCeeEEEcCCCEEEEEEC
Confidence            678888886 4557888899999988864

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=95.14  E-value=0.15  Score=42.20  Aligned_cols=117  Identities=10%  Similarity=0.088  Sum_probs=68.2

Q ss_pred             eeccCCcceEEccc-cCe-EEEEe-CCEEEEEEcCCcc---eeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEE
Q psy17021         80 KTSVDEVPYAMCPF-QGA-LLVGV-GRYLRLYDLGKKK---LLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        80 ~~~~kG~v~aL~~f-~g~-LLaav-g~~v~vy~l~~~~---Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~  151 (199)
                      ....+++++++.-- +|+ |++|- .++|++|++...+   +.+..... ....+.++..  .+++++.|..-..+.++.
T Consensus        96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd  174 (377)
T 3dwl_C           96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCADRKAYVLS  174 (377)
T ss_dssp             CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred             ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence            34456777776543 344 44433 6789999997654   22222110 1234666665  467999999888998888


Q ss_pred             EeCCC--------------CeEEEEeccCCceeEEEEEEEe-CCeEEEEcCCCcEEEEeec
Q psy17021        152 YKRYE--------------NQLLIFADDTQPRWITTSCVLD-YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       152 y~~~~--------------~~l~~varD~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr~~  197 (199)
                      .....              ..-..+..=....+++++.+-. ...++.+..++.+.++.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~  235 (377)
T 3dwl_C          175 AYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPS  235 (377)
T ss_dssp             ECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred             EEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence            74211              0111111114566799998874 4468888899998887653

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=95.03  E-value=0.78  Score=41.97  Aligned_cols=94  Identities=13%  Similarity=0.105  Sum_probs=57.9

Q ss_pred             EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021         97 LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT  173 (199)
Q Consensus        97 LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta  173 (199)
                      ++.| -.++|++|++...++.....-  ....+.++..  .+++++.|..-.+|.+....  .++....-.  ....+++
T Consensus       534 l~s~s~d~~v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~--~~~~~~~~~--~~~~v~~  607 (694)
T 3dm0_A          534 IVSASWDKTVKVWNLSNCKLRSTLAG--HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA--EGKKLYSLE--ANSVIHA  607 (694)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSBCEEEETT--TTEEEECCB--CSSCEEE
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEEcC--CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC--CCceEEEec--CCCcEEE
Confidence            4433 468999999987765443221  1234666665  47799999988888887543  333222111  2346788


Q ss_pred             EEEEeCCeEEEEcCCCcEEEEee
Q psy17021        174 SCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       174 ~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      +.+-.++.++++-.++++.++.+
T Consensus       608 ~~~sp~~~~l~~~~~~~i~iwd~  630 (694)
T 3dm0_A          608 LCFSPNRYWLCAATEHGIKIWDL  630 (694)
T ss_dssp             EEECSSSSEEEEEETTEEEEEET
T ss_pred             EEEcCCCcEEEEEcCCCEEEEEC
Confidence            88876666666655666776643

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=95.02  E-value=1.5  Score=37.53  Aligned_cols=114  Identities=11%  Similarity=0.079  Sum_probs=69.1

Q ss_pred             ccCCcceEEccc--cCeEEE--EeCCEEEEEEcCC-cceeeeeeccCcCceEEEEEEe--C-CEEEEEeccccEEEEEEe
Q psy17021         82 SVDEVPYAMCPF--QGALLV--GVGRYLRLYDLGK-KKLLRKCENKHLPNLIVKIESM--G-HRIYVSDVQESVFLVRYK  153 (199)
Q Consensus        82 ~~kG~v~aL~~f--~g~LLa--avg~~v~vy~l~~-~~Ll~~~~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll~y~  153 (199)
                      ..+++++++.--  ...+++  +..++|++|++.. ++.+..-..  ....+.++.-.  + .+++.|..-.+|.++...
T Consensus       275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~  352 (430)
T 2xyi_A          275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLS  352 (430)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred             cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence            344566665433  333443  3468999999976 332222111  12346677653  4 468888888899888775


Q ss_pred             CCC------------CeEEEEeccCCceeEEEEEEEeCC--eEEEEcCCCcEEEEeecC
Q psy17021        154 RYE------------NQLLIFADDTQPRWITTSCVLDYN--TVASADKFGNVCIVSTYR  198 (199)
Q Consensus       154 ~~~------------~~l~~varD~~~~wvta~~~Ld~~--t~l~aD~~gNl~vlr~~~  198 (199)
                      ...            .++...- .....+++++.+-.++  .++.+..++.|.++++++
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          353 KIGEEQSTEDAEDGPPELLFIH-GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             GTTCCCCHHHHHHCCTTEEEEC-CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             CCccccCccccccCCcceEEEc-CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence            422            1232222 2234578888887444  577888899999998753

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=95.00  E-value=1.1  Score=37.01  Aligned_cols=84  Identities=10%  Similarity=0.007  Sum_probs=55.8

Q ss_pred             cCe-EEEEe-C--CEEEEEEcC--CcceeeeeeccCcCceEEEEE--EeCCEEEEEec-cccEEEEEEeCCCCeEEEEec
Q psy17021         94 QGA-LLVGV-G--RYLRLYDLG--KKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDV-QESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus        94 ~g~-LLaav-g--~~v~vy~l~--~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~-~~Sv~ll~y~~~~~~l~~var  164 (199)
                      +|+ |+++- +  +++.+|++.  ..++....... ....+..+.  ..++++++++. -..+.+++++.+.+++..+..
T Consensus       269 dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~  347 (361)
T 3scy_A          269 DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-TGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKK  347 (361)
T ss_dssp             TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-CSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSC
T ss_pred             CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-CCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecce
Confidence            454 54544 3  689999995  23433332222 112233343  45788999985 468999999988999999887


Q ss_pred             cCCceeEEEEEEEe
Q psy17021        165 DTQPRWITTSCVLD  178 (199)
Q Consensus       165 D~~~~wvta~~~Ld  178 (199)
                      ....-.++|+.|+|
T Consensus       348 ~~~~~~p~~v~~~~  361 (361)
T 3scy_A          348 DIKVDKPVCLKFVD  361 (361)
T ss_dssp             CEECSSEEEEEEEC
T ss_pred             eeeCCCCeEEEEcC
Confidence            76666789998875

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=94.89  E-value=0.43  Score=39.63  Aligned_cols=113  Identities=12%  Similarity=0.102  Sum_probs=68.5

Q ss_pred             CCcceEEcccc--CeEEEE--eCCEEEEEEcCCcceeeeeeccCc----CceEEEEEEe--C-CEEEEEeccc---cEEE
Q psy17021         84 DEVPYAMCPFQ--GALLVG--VGRYLRLYDLGKKKLLRKCENKHL----PNLIVKIESM--G-HRIYVSDVQE---SVFL  149 (199)
Q Consensus        84 kG~v~aL~~f~--g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~----~~~i~~l~~~--~-~~IlVGD~~~---Sv~l  149 (199)
                      .++++++.--.  +.++++  -..+|++|++...+.+........    ...+.++...  + .++++|.--.   .+.+
T Consensus       165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~  244 (416)
T 2pm9_A          165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI  244 (416)
T ss_dssp             SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred             CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence            44566554332  455544  357899999987765444333200    2346777654  3 4788887766   7777


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEE--eCCeEEEEcCCCcEEEEeec
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVL--DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~L--d~~t~l~aD~~gNl~vlr~~  197 (199)
                      +..+.....+..+. ......++++.+-  |...++.+..++.+.++.+.
T Consensus       245 ~d~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~  293 (416)
T 2pm9_A          245 WDLRNANTPLQTLN-QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE  293 (416)
T ss_dssp             EETTSTTSCSBCCC-SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred             EeCCCCCCCcEEee-cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence            76543222222221 1345678888886  45578888999999888643

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=94.87  E-value=1.6  Score=37.10  Aligned_cols=98  Identities=12%  Similarity=0.118  Sum_probs=68.2

Q ss_pred             cCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021         94 QGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI  171 (199)
Q Consensus        94 ~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv  171 (199)
                      ++.|.+|.+++|++|+....+..+......-...|+++.-  .++++++|..-.+|.+...  +.++....-..+. ..+
T Consensus       116 ~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~--~~~~~~~~~~~h~-~~v  192 (420)
T 4gga_A          116 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV--QQQKRLRNMTSHS-ARV  192 (420)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEET--TTTEEEEEECCCS-SCE
T ss_pred             CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEc--CCCcEEEEEeCCC-Cce
Confidence            3567788999999999988776666555422345888875  4789999999888888654  4555544444433 345


Q ss_pred             EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        172 TTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       172 ta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      .++.. |...++.+..++.+.+..
T Consensus       193 ~~~s~-~~~~l~sgs~d~~i~~~d  215 (420)
T 4gga_A          193 GSLSW-NSYILSSGSRSGHIHHHD  215 (420)
T ss_dssp             EEEEE-ETTEEEEEETTSEEEEEE
T ss_pred             EEEee-CCCEEEEEeCCCceeEee
Confidence            55544 677788888888887764

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=94.79  E-value=0.48  Score=43.38  Aligned_cols=99  Identities=16%  Similarity=0.183  Sum_probs=63.6

Q ss_pred             cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec--cCC
Q psy17021         94 QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD--DTQ  167 (199)
Q Consensus        94 ~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var--D~~  167 (199)
                      +|+ |+.| ..++|++|++...+..+...-  ....|.++.-  .+++++.|..-.+|.+..  ........+..  ...
T Consensus       441 ~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd--~~~~~~~~~~~~~~~h  516 (694)
T 3dm0_A          441 DGQFALSGSWDGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVSASRDRTIKLWN--TLGECKYTISEGGEGH  516 (694)
T ss_dssp             TSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEEC--TTSCEEEEECSSTTSC
T ss_pred             CCCEEEEEeCCCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEEEeCCCEEEEEE--CCCCcceeeccCCCCC
Confidence            344 4433 368999999987665443221  1223666654  467899998888888764  33333333332  345


Q ss_pred             ceeEEEEEEEeC---CeEEEEcCCCcEEEEee
Q psy17021        168 PRWITTSCVLDY---NTVASADKFGNVCIVST  196 (199)
Q Consensus       168 ~~wvta~~~Ld~---~t~l~aD~~gNl~vlr~  196 (199)
                      ..|++++.+-.+   ..++.+..++.+.++.+
T Consensus       517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~  548 (694)
T 3dm0_A          517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL  548 (694)
T ss_dssp             SSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred             CCcEEEEEEeCCCCcceEEEEeCCCeEEEEEC
Confidence            678999998744   36888888999888754

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=94.74  E-value=1.5  Score=36.20  Aligned_cols=181  Identities=12%  Similarity=0.119  Sum_probs=95.3

Q ss_pred             eeEEecCCCcceeec--ccCCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEE-EcCceeEECC----
Q psy17021          3 FVHKTSVDEVPYAMC--PFQGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTH-SGRSDRLVGN----   73 (199)
Q Consensus         3 ~~h~t~~~~~~~~~~--~f~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~-~~~~ri~vgd----   73 (199)
                      .++..+....|.+++  +-..+|++.-  .+.+++||+...++++.-...    ..+.   ...- ..+.+++++.    
T Consensus        24 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~----~~v~---~~~~spdg~~l~~~~~~~~   96 (391)
T 1l0q_A           24 VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG----SSPQ---GVAVSPDGKQVYVTNMASS   96 (391)
T ss_dssp             EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS----SSEE---EEEECTTSSEEEEEETTTT
T ss_pred             EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC----CCcc---ceEECCCCCEEEEEECCCC
Confidence            345555555565543  3334564543  488999999776666543322    2221   1111 1123443311    


Q ss_pred             --------eeeEEEeeccCCcceEEccc-cCe-EEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEE
Q psy17021         74 --------AMEFVHKTSVDEVPYAMCPF-QGA-LLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIY  139 (199)
Q Consensus        74 --------klesVh~~~~kG~v~aL~~f-~g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~Il  139 (199)
                              ..+.+......+.+.++.-- +|+ ++++.  +++|++|++...+.+......   ..+..+..  .+++++
T Consensus        97 ~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~dg~~l~  173 (391)
T 1l0q_A           97 TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG---RSPKGIAVTPDGTKVY  173 (391)
T ss_dssp             EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC---SSEEEEEECTTSSEEE
T ss_pred             EEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC---CCcceEEECCCCCEEE
Confidence                    12333344445566665533 344 53443  589999999877665543332   23445544  466776


Q ss_pred             EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe-CCeEEEEc---CCCcEEEEee
Q psy17021        140 VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD-YNTVASAD---KFGNVCIVST  196 (199)
Q Consensus       140 VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld-~~t~l~aD---~~gNl~vlr~  196 (199)
                      +.....+- +..|+...++.......  ..++.++.+-. ...++.+.   .++.+.++..
T Consensus       174 ~~~~~~~~-v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~  231 (391)
T 1l0q_A          174 VANFDSMS-ISVIDTVTNSVIDTVKV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT  231 (391)
T ss_dssp             EEETTTTE-EEEEETTTTEEEEEEEC--SSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred             EEeCCCCE-EEEEECCCCeEEEEEec--CCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence            66554432 34456666655544433  34677777763 33555555   5778877653

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=94.67  E-value=0.94  Score=37.11  Aligned_cols=97  Identities=12%  Similarity=0.039  Sum_probs=39.5

Q ss_pred             eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021         96 ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT  173 (199)
Q Consensus        96 ~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta  173 (199)
                      .+.++-++.+++|++...+.+..-..  ....+.++..  .+.+++.|..-..+.++..+..+  .  +...........
T Consensus       307 ~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--~--~~~~~~~~~~~~  380 (408)
T 4a11_B          307 FVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE--P--VPDDDETTTKSQ  380 (408)
T ss_dssp             EEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------
T ss_pred             EEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC--c--cCCCCceEeccc
Confidence            34566789999999987765443221  1234556554  46789999998899988775422  2  222222223344


Q ss_pred             EEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021        174 SCVLDYNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       174 ~~~Ld~~t~l~aD~~gNl~vlr~~~  198 (199)
                      ....+...+..++.++.+.+...|+
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~W~~~~  405 (408)
T 4a11_B          381 LNPAFEDAWSSSDEEGGTSAWSHPQ  405 (408)
T ss_dssp             -------------------------
T ss_pred             cccccceeecccCccCceeecCCcc
Confidence            4455666777777778877776654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=94.45  E-value=2.1  Score=41.15  Aligned_cols=95  Identities=18%  Similarity=0.106  Sum_probs=60.7

Q ss_pred             Ce-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec------
Q psy17021         95 GA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD------  164 (199)
Q Consensus        95 g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var------  164 (199)
                      |+ |+.+ -.++|++|++...+++..-..   +..+.++..  .++++++|+.-..|.++.  ...+++....-      
T Consensus        69 g~~L~S~s~D~~v~lWd~~~~~~~~~~~~---~~~V~~v~~sp~g~~l~sgs~dg~V~lwd--~~~~~~~~~~i~~~~~~  143 (902)
T 2oaj_A           69 GIYLVVINAKDTVYVLSLYSQKVLTTVFV---PGKITSIDTDASLDWMLIGLQNGSMIVYD--IDRDQLSSFKLDNLQKS  143 (902)
T ss_dssp             TTEEEEEETTCEEEEEETTTCSEEEEEEC---SSCEEEEECCTTCSEEEEEETTSCEEEEE--TTTTEEEEEEECCHHHH
T ss_pred             CCEEEEEECcCeEEEEECCCCcEEEEEcC---CCCEEEEEECCCCCEEEEEcCCCcEEEEE--CCCCccccceecccccc
Confidence            65 4433 368999999987765543332   234555554  578999999988887764  44555432211      


Q ss_pred             ----cCCceeEEEEEEEe--CCeEEEEcCCCcEEEEe
Q psy17021        165 ----DTQPRWITTSCVLD--YNTVASADKFGNVCIVS  195 (199)
Q Consensus       165 ----D~~~~wvta~~~Ld--~~t~l~aD~~gNl~vlr  195 (199)
                          .....+|+++++-.  .+.++.+..++.+ +..
T Consensus       144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd  179 (902)
T 2oaj_A          144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYS  179 (902)
T ss_dssp             HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEE
T ss_pred             ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEE
Confidence                12345788888873  3478888888877 664

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=94.43  E-value=1.6  Score=35.22  Aligned_cols=114  Identities=7%  Similarity=0.031  Sum_probs=68.2

Q ss_pred             CCcceEEcccc---CeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---------------CCEEEEEec
Q psy17021         84 DEVPYAMCPFQ---GALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---------------GHRIYVSDV  143 (199)
Q Consensus        84 kG~v~aL~~f~---g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---------------~~~IlVGD~  143 (199)
                      .++++++.--.   |.+|+  +-.++|++|++.................+.++.-.               +.+++.|..
T Consensus        99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~  178 (297)
T 2pm7_B           99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA  178 (297)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET
T ss_pred             CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC
Confidence            45666654322   54443  33689999999754211111111111234444432               358999999


Q ss_pred             cccEEEEEEeCCCCeEEEEe-ccCCceeEEEEEEEeC----CeEEEEcCCCcEEEEeec
Q psy17021        144 QESVFLVRYKRYENQLLIFA-DDTQPRWITTSCVLDY----NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       144 ~~Sv~ll~y~~~~~~l~~va-rD~~~~wvta~~~Ld~----~t~l~aD~~gNl~vlr~~  197 (199)
                      -..|.+..++.......... -.....+|+++.+-.+    ..++.+..++.+.+....
T Consensus       179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~  237 (297)
T 2pm7_B          179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD  237 (297)
T ss_dssp             TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence            89999998876554332221 1234668999998743    467788888998887653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=94.40  E-value=1.2  Score=36.81  Aligned_cols=113  Identities=13%  Similarity=0.168  Sum_probs=73.3

Q ss_pred             ccCCcceEEcccc-C-eEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe---CCEEEEEeccccEEEEEEeC
Q psy17021         82 SVDEVPYAMCPFQ-G-ALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM---GHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        82 ~~kG~v~aL~~f~-g-~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ..++.++++.--. | +++|+.  ..+|++|++...+.............|.++.-.   +++++.|..-.++.++..+ 
T Consensus        71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-  149 (383)
T 3ei3_B           71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS-  149 (383)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-
T ss_pred             CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-
Confidence            4456777765333 3 344333  579999999876644433322123357777764   4789999888888877653 


Q ss_pred             CCCeEEEEeccC-CceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        155 YENQLLIFADDT-QPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       155 ~~~~l~~varD~-~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                       .+.+..+.... ...+++++.+- |...++.++.++.+.++.+
T Consensus       150 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~  192 (383)
T 3ei3_B          150 -GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL  192 (383)
T ss_dssp             -SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred             -CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence             45555554432 35778888887 4457888899999988764

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=94.38  E-value=1.3  Score=37.22  Aligned_cols=115  Identities=11%  Similarity=0.063  Sum_probs=67.4

Q ss_pred             ccCCcceEEccc-cC-eEEEEeCCEEEEEEcCC-cceeeee-----eccCcCceEEEEEEe--C-CEEEEEeccccEEEE
Q psy17021         82 SVDEVPYAMCPF-QG-ALLVGVGRYLRLYDLGK-KKLLRKC-----ENKHLPNLIVKIESM--G-HRIYVSDVQESVFLV  150 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g-~LLaavg~~v~vy~l~~-~~Ll~~~-----~~~~~~~~i~~l~~~--~-~~IlVGD~~~Sv~ll  150 (199)
                      ...++++++.-- +| .|+.|-.++|++|++.. .+.....     ........+.++.-.  + ++++.|..-..|.++
T Consensus       175 ~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw  254 (447)
T 3dw8_B          175 AHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC  254 (447)
T ss_dssp             CCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred             CCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence            345666665432 34 46666678999999983 3332211     121122346666653  4 799999998888887


Q ss_pred             EEeCCCC---eEEEEeccCCc----------eeEEEEEEEeCC-eEEEEcCCCcEEEEeec
Q psy17021        151 RYKRYEN---QLLIFADDTQP----------RWITTSCVLDYN-TVASADKFGNVCIVSTY  197 (199)
Q Consensus       151 ~y~~~~~---~l~~varD~~~----------~wvta~~~Ld~~-t~l~aD~~gNl~vlr~~  197 (199)
                      ..+....   ....+..+..+          ..++++.+-.++ .++.++. +.+.++.+.
T Consensus       255 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~  314 (447)
T 3dw8_B          255 DMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN  314 (447)
T ss_dssp             ETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred             ECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence            6543221   02333222211          278888887444 5666666 999888653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=94.35  E-value=1.6  Score=34.88  Aligned_cols=89  Identities=13%  Similarity=0.094  Sum_probs=56.5

Q ss_pred             CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC
Q psy17021        102 GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY  179 (199)
Q Consensus       102 g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~  179 (199)
                      ...+++|++...+++..-.-  -...+.++..  .+++++.|..-..+.++..  ...+....-.  ....++++.+-++
T Consensus       194 d~~i~i~d~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~~~~  267 (340)
T 4aow_A          194 DKLVKVWNLANCKLKTNHIG--HTGYLNTVTVSPDGSLCASGGKDGQAMLWDL--NEGKHLYTLD--GGDIINALCFSPN  267 (340)
T ss_dssp             TSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTCEEEEEET--TTTEEEEEEE--CSSCEEEEEECSS
T ss_pred             CCEEEEEECCCCceeeEecC--CCCcEEEEEECCCCCEEEEEeCCCeEEEEEe--ccCceeeeec--CCceEEeeecCCC
Confidence            57899999988765443221  1234666665  4679999988778777644  3332222212  2346788888777


Q ss_pred             CeEEEEcCCCcEEEEee
Q psy17021        180 NTVASADKFGNVCIVST  196 (199)
Q Consensus       180 ~t~l~aD~~gNl~vlr~  196 (199)
                      +.++.+-.++.+.++.+
T Consensus       268 ~~~~~~~~d~~i~iwd~  284 (340)
T 4aow_A          268 RYWLCAATGPSIKIWDL  284 (340)
T ss_dssp             SSEEEEEETTEEEEEET
T ss_pred             CceeeccCCCEEEEEEC
Confidence            77777767788777643

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=94.32  E-value=1  Score=37.03  Aligned_cols=29  Identities=17%  Similarity=0.115  Sum_probs=22.4

Q ss_pred             CceeEEEEEEEeCC-----eEEEEcCCCcEEEEe
Q psy17021        167 QPRWITTSCVLDYN-----TVASADKFGNVCIVS  195 (199)
Q Consensus       167 ~~~wvta~~~Ld~~-----t~l~aD~~gNl~vlr  195 (199)
                      ....++++.+...+     .++.+-.+|.|.+..
T Consensus       343 H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd  376 (377)
T 3dwl_C          343 HQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT  376 (377)
T ss_dssp             CSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred             ccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence            56678899887554     588888899988764

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=94.13  E-value=1.7  Score=34.35  Aligned_cols=98  Identities=12%  Similarity=0.118  Sum_probs=62.9

Q ss_pred             cCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021         94 QGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI  171 (199)
Q Consensus        94 ~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv  171 (199)
                      +|.|.+|.+++|++|+....++++..........|.++.-  .+++++.|..-.+|.+..  .+.++....-..+.. .+
T Consensus        36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~--~~~~~~~~~~~~h~~-~~  112 (318)
T 4ggc_A           36 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWD--VQQQKRLRNMTSHSA-RV  112 (318)
T ss_dssp             TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEE--TTTTEEEEEEECCSS-CE
T ss_pred             CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEee--cCCceeEEEecCccc-eE
Confidence            3556688899999999988777666554322335777775  468999999888887764  455555444444433 23


Q ss_pred             EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        172 TTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       172 ta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      .+... +...++.+..++.+....
T Consensus       113 ~~~~~-~~~~l~s~~~~~~~~~~~  135 (318)
T 4ggc_A          113 GSLSW-NSYILSSGSRSGHIHHHD  135 (318)
T ss_dssp             EEEEE-ETTEEEEEETTSEEEEEE
T ss_pred             EEeec-CCCEEEEEecCCceEeee
Confidence            33332 555666677777665543

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=93.98  E-value=1.4  Score=42.79  Aligned_cols=102  Identities=10%  Similarity=0.167  Sum_probs=67.1

Q ss_pred             EEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEecc
Q psy17021         89 AMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADD  165 (199)
Q Consensus        89 aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD  165 (199)
                      ++.|-...+++|- ++.+++|++...+........  ...+.++.  ..+++++.|..-.++.++..  ..++...+  -
T Consensus       968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h--~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~--~~~~~~~~--~ 1041 (1249)
T 3sfz_A          968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH--KKAVRHIQFTADGKTLISSSEDSVIQVWNW--QTGDYVFL--Q 1041 (1249)
T ss_dssp             EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC--SSCCCCEEECSSSSCEEEECSSSBEEEEET--TTTEEECC--B
T ss_pred             EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC--CCceEEEEECCCCCEEEEEcCCCEEEEEEC--CCCceEEE--e
Confidence            3444444555544 578999999876654432211  12344444  45778899988778777654  44544432  3


Q ss_pred             CCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        166 TQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       166 ~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ..+..++++.+..++.++.+..++.+.++..
T Consensus      1042 ~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A         1042 AHQETVKDFRLLQDSRLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp             CCSSCEEEEEECSSSEEEEEESSSEEEEEET
T ss_pred             cCCCcEEEEEEcCCCcEEEEECCCcEEEEEC
Confidence            4567888999988888999999999988765

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=93.97  E-value=1.4  Score=35.99  Aligned_cols=71  Identities=11%  Similarity=0.191  Sum_probs=41.9

Q ss_pred             CCcceEEc---cccCeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----CCEEEEEeccccEEEEEEeC
Q psy17021         84 DEVPYAMC---PFQGALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----GHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        84 kG~v~aL~---~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      +++|+++.   +..|.+||+  -.++|++|++...+......+......+.++.-.    +.+++.|..-..+.+..++.
T Consensus        57 ~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~  136 (316)
T 3bg1_A           57 EGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG  136 (316)
T ss_dssp             SSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS
T ss_pred             CccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC
Confidence            45566654   223554443  3689999999765322222222111235555542    56899999999999988754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=93.69  E-value=2.5  Score=34.75  Aligned_cols=107  Identities=11%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             CcceEEccc-cCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         85 EVPYAMCPF-QGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        85 G~v~aL~~f-~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      ++|+++.-- +|.+++ | -.++|++|++...+.++...-  -...+.++.-  .+++++.|..-..+.+....  ....
T Consensus        77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~--~~~~  152 (343)
T 2xzm_R           77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAEREIKLWNIL--GECK  152 (343)
T ss_dssp             SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETTSCEEEEESS--SCEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCCCEEEEEecc--CCce
Confidence            445544322 344443 3 368999999987665443221  1223566654  57799999988888887643  2222


Q ss_pred             EEEe-ccCCceeEEEEEEEeC-----------CeEEEEcCCCcEEEEe
Q psy17021        160 LIFA-DDTQPRWITTSCVLDY-----------NTVASADKFGNVCIVS  195 (199)
Q Consensus       160 ~~va-rD~~~~wvta~~~Ld~-----------~t~l~aD~~gNl~vlr  195 (199)
                      .... ......|++++.+-..           ..++.+..++.+.++.
T Consensus       153 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd  200 (343)
T 2xzm_R          153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN  200 (343)
T ss_dssp             EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE
T ss_pred             eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc
Confidence            2222 2245668888887643           3577777788877764

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=93.69  E-value=2  Score=33.75  Aligned_cols=102  Identities=16%  Similarity=0.021  Sum_probs=61.6

Q ss_pred             CeEEEEeCCEEEEEEc-CCcceeeeeeccCcCceEEEEEEe--C----CEEEEEeccccEEEEEEeCCCC----------
Q psy17021         95 GALLVGVGRYLRLYDL-GKKKLLRKCENKHLPNLIVKIESM--G----HRIYVSDVQESVFLVRYKRYEN----------  157 (199)
Q Consensus        95 g~LLaavg~~v~vy~l-~~~~Ll~~~~~~~~~~~i~~l~~~--~----~~IlVGD~~~Sv~ll~y~~~~~----------  157 (199)
                      ..++++-.....+|.. ...++............+.++...  +    ++++.|..-..|.++.......          
T Consensus       183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  262 (351)
T 3f3f_A          183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTN  262 (351)
T ss_dssp             CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------
T ss_pred             cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccc
Confidence            3455555544445544 444443333333223347777754  3    5899999888999998765311          


Q ss_pred             ----------------------------------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 ----------------------------------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ----------------------------------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                                                        +....-+ .....++++.+- |...++.+..+|.+.++.+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~  336 (351)
T 3f3f_A          263 SNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD-DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT  336 (351)
T ss_dssp             ----------------------------CCSEEEEEEEEEC-TTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             eeccCCCcccccccccccccccceeeeecccccccEEEEEe-cccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence                                              1111111 234568888887 44578889999999999875

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=93.68  E-value=2.5  Score=34.77  Aligned_cols=155  Identities=10%  Similarity=0.081  Sum_probs=81.7

Q ss_pred             CeeEEEecchhhhhhhhhhcccccCceeeeeEEEE-EcCceeEE------------CCeeeEEEeeccCCcceEEccc-c
Q psy17021         29 RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTH-SGRSDRLV------------GNAMEFVHKTSVDEVPYAMCPF-Q   94 (199)
Q Consensus        29 ~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~-~~~~ri~v------------gdklesVh~~~~kG~v~aL~~f-~   94 (199)
                      +.+++||+...++++.-...    ..+.   .... ..+.++++            ....+.+......+.+.++.-- +
T Consensus        12 ~~v~v~d~~~~~~~~~~~~~----~~~~---~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spd   84 (391)
T 1l0q_A           12 DNISVIDVTSNKVTATIPVG----SNPM---GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPD   84 (391)
T ss_dssp             TEEEEEETTTTEEEEEEECS----SSEE---EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred             CEEEEEECCCCeEEEEeecC----CCcc---eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCC
Confidence            78999999877666533222    1111   1111 11223322            1233445555556677765533 3


Q ss_pred             Ce-EEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCce
Q psy17021         95 GA-LLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPR  169 (199)
Q Consensus        95 g~-LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~  169 (199)
                      |+ |+++-  .++|++|++...+.+.....   +..+.++..  .++++++..-... .+..|+...++....-...  .
T Consensus        85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~~--~  158 (391)
T 1l0q_A           85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNNGDK-TVSVINTVTKAVINTVSVG--R  158 (391)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEECC--S
T ss_pred             CCEEEEEECCCCEEEEEECCCCeEEEEEeC---CCCcceEEECCCCCEEEEEeCCCC-EEEEEECCCCcEEEEEecC--C
Confidence            44 54444  37999999987765544332   233555554  3567755544333 3444666565554443322  2


Q ss_pred             eEEEEEEEeCC-eE-EEEcCCCcEEEEee
Q psy17021        170 WITTSCVLDYN-TV-ASADKFGNVCIVST  196 (199)
Q Consensus       170 wvta~~~Ld~~-t~-l~aD~~gNl~vlr~  196 (199)
                      .+.++.+-.++ .+ +.+..++.+.++..
T Consensus       159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~  187 (391)
T 1l0q_A          159 SPKGIAVTPDGTKVYVANFDSMSISVIDT  187 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence            34566665333 44 45566677777653

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=93.54  E-value=2.9  Score=35.07  Aligned_cols=88  Identities=10%  Similarity=0.076  Sum_probs=49.7

Q ss_pred             EEccccCeE-EEEeC---CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021         89 AMCPFQGAL-LVGVG---RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        89 aL~~f~g~L-Laavg---~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v  162 (199)
                      ++.| +|++ ++|-+   ++|++|++...+.+..-...   ..|.++.-  .+.+++.|. -.++.++. ..........
T Consensus       140 ~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~---~~V~~v~fspdg~~l~s~s-~~~~~~~~-~~~~~~~~~~  213 (365)
T 4h5i_A          140 YISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR---GEVKDLHFSTDGKVVAYIT-GSSLEVIS-TVTGSCIARK  213 (365)
T ss_dssp             EECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEECS---SCCCEEEECTTSSEEEEEC-SSCEEEEE-TTTCCEEEEE
T ss_pred             EEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC---CceEEEEEccCCceEEecc-ceeEEEEE-eccCcceeee
Confidence            3444 4554 44543   68999999877654443332   23445543  467877775 34544332 2223333333


Q ss_pred             eccCCceeEEEEEEEeCCeE
Q psy17021        163 ADDTQPRWITTSCVLDYNTV  182 (199)
Q Consensus       163 arD~~~~wvta~~~Ld~~t~  182 (199)
                      -.......++++.|..++.+
T Consensus       214 ~~~~~~~~v~~v~fspdg~~  233 (365)
T 4h5i_A          214 TDFDKNWSLSKINFIADDTV  233 (365)
T ss_dssp             CCCCTTEEEEEEEEEETTEE
T ss_pred             ecCCCCCCEEEEEEcCCCCE
Confidence            34445677889999877643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=93.47  E-value=1.8  Score=36.19  Aligned_cols=108  Identities=6%  Similarity=0.021  Sum_probs=58.6

Q ss_pred             cceEEccc-cC-eEEEEeCCEEEEEEcCC-cceeeeeeccCc-C--------------ceEEEEEEeCCEEEEEeccccE
Q psy17021         86 VPYAMCPF-QG-ALLVGVGRYLRLYDLGK-KKLLRKCENKHL-P--------------NLIVKIESMGHRIYVSDVQESV  147 (199)
Q Consensus        86 ~v~aL~~f-~g-~LLaavg~~v~vy~l~~-~~Ll~~~~~~~~-~--------------~~i~~l~~~~~~IlVGD~~~Sv  147 (199)
                      +++++.-- +| .|+++-.+.|++|++.. .+.+........ .              .+.......+.+++.|..-..|
T Consensus       287 ~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v  366 (447)
T 3dw8_B          287 SISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFF  366 (447)
T ss_dssp             CEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEE
T ss_pred             eEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEE
Confidence            56654432 34 45566668999999975 443332211100 0              0113444457788888887787


Q ss_pred             EEEEEeCCCCeEEEEeccC-------------------------------CceeEEEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        148 FLVRYKRYENQLLIFADDT-------------------------------QPRWITTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       148 ~ll~y~~~~~~l~~varD~-------------------------------~~~wvta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      .++..+  .++...+..+.                               ....++++++-.++.+|++=...|++++.
T Consensus       367 ~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~  443 (447)
T 3dw8_B          367 RMFDRN--TKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQ  443 (447)
T ss_dssp             EEEETT--TCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred             EEEEcC--CCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeec
Confidence            776543  33333222111                               12345666666555566555666788874

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=93.43  E-value=0.48  Score=40.66  Aligned_cols=113  Identities=21%  Similarity=0.312  Sum_probs=72.3

Q ss_pred             ccCCcceEEc--cccCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeC
Q psy17021         82 SVDEVPYAMC--PFQGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        82 ~~kG~v~aL~--~f~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      ..++.|+|++  |-++.+|| | -..+|++|++...+.........-...|.+|.-   .+++++.|..-.+|.++.+  
T Consensus       117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~--  194 (435)
T 4e54_B          117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF--  194 (435)
T ss_dssp             ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET--
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec--
Confidence            3455566654  45565554 3 368999999975543222222211224667764   3678999987778877643  


Q ss_pred             CCCeEEEEe-ccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        155 YENQLLIFA-DDTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       155 ~~~~l~~va-rD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      +.+.+..+. .+....|++++.+- |...++.++.+|++.++..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~  238 (435)
T 4e54_B          195 KGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM  238 (435)
T ss_dssp             TSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred             cCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence            455554444 45567788888887 4457888999999988764

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=93.39  E-value=3.1  Score=34.87  Aligned_cols=99  Identities=9%  Similarity=0.086  Sum_probs=62.6

Q ss_pred             eEEEEe-CCEEEEEEcCCcceeeeee--c-cCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCc
Q psy17021         96 ALLVGV-GRYLRLYDLGKKKLLRKCE--N-KHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQP  168 (199)
Q Consensus        96 ~LLaav-g~~v~vy~l~~~~Ll~~~~--~-~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~  168 (199)
                      .|+.|- .+++++|++...+.+....  . ......+.++..   .+++++.|..-..|.++..+.....+..+..  ..
T Consensus       172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--h~  249 (380)
T 3iz6_a          172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--HE  249 (380)
T ss_dssp             CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--CS
T ss_pred             EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--cC
Confidence            355444 5889999998765443221  1 111224666665   4679999998888888765433333333322  34


Q ss_pred             eeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        169 RWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       169 ~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      .+|+++.+- |...++.+..++.+.++.+
T Consensus       250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~  278 (380)
T 3iz6_a          250 GDINSVKFFPDGQRFGTGSDDGTCRLFDM  278 (380)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSCEEEEET
T ss_pred             CCeEEEEEecCCCeEEEEcCCCeEEEEEC
Confidence            567788887 4457888888998888753

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=93.06  E-value=2.7  Score=33.26  Aligned_cols=178  Identities=11%  Similarity=0.104  Sum_probs=91.8

Q ss_pred             cceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcc---cccCceeeeeEEEE-EcCceeEECCe--eeEEEeec
Q psy17021         12 VPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKV---RIKGFRKAHQTHTH-SGRSDRLVGNA--MEFVHKTS   82 (199)
Q Consensus        12 ~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~---~~~~~~~~~~~~~~-~~~~ri~vgdk--lesVh~~~   82 (199)
                      .|.+++-- .|+++|+-  .+.+++||...+ .++.-....   .....+   ..+.. ..++++++++.  -..+....
T Consensus        31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p---~~i~~~~~~g~l~v~~~~~~~~i~~~d  106 (286)
T 1q7f_A           31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYP---NRVAVVRNSGDIIVTERSPTHQIQIYN  106 (286)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSE---EEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             CCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCc---eEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence            46766533 57887773  367999997533 333211100   000122   12222 13456655431  12222221


Q ss_pred             cC------------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEecccc
Q psy17021         83 VD------------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQES  146 (199)
Q Consensus        83 ~k------------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~S  146 (199)
                      -+            ..++++..- +|+++++-  ++.|.+|+...+.+ ...........+..+... ++.++|+|....
T Consensus       107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~  185 (286)
T 1q7f_A          107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL-HKFGCSKHLEFPNGVVVNDKQEIFISDNRAH  185 (286)
T ss_dssp             TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred             CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEE-EEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence            11            234444322 57787775  57899998654433 222211112346677764 357889987654


Q ss_pred             EEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCC--cEEEEe
Q psy17021        147 VFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFG--NVCIVS  195 (199)
Q Consensus       147 v~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~g--Nl~vlr  195 (199)
                       .+..|++....+..+..+-...+.+++.+=.++.++++|...  .|.++.
T Consensus       186 -~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~  235 (286)
T 1q7f_A          186 -CVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT  235 (286)
T ss_dssp             -EEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred             -EEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence             255667766666666654333566666654445677777654  466553

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=93.04  E-value=3.4  Score=34.34  Aligned_cols=173  Identities=10%  Similarity=-0.024  Sum_probs=88.5

Q ss_pred             ecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEECCe-----------eeE
Q psy17021         16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLVGNA-----------MEF   77 (199)
Q Consensus        16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~vgdk-----------les   77 (199)
                      .+...|++++|.. ..|..||....+++-+....  .|...      ..+...-...+++++++..           -+.
T Consensus       184 ~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~  261 (376)
T 3q7m_A          184 PTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRIS--QATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI  261 (376)
T ss_dssp             CEEETTEEEECCTTTEEEEEETTTCCEEEEEECC--C-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE
T ss_pred             cEEECCEEEEEcCCCEEEEEECCCCcEEEEEecc--cCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE
Confidence            3444899999985 57999998554555433322  11000      0000000111345544321           122


Q ss_pred             EEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCC
Q psy17021         78 VHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        78 Vh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      +...... ...++..-.+.|.++- +..|..++....+.+-..... ......+....++.+++|+--..  +..|+...
T Consensus       262 ~w~~~~~-~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~l~v~~~~g~--l~~~d~~t  337 (376)
T 3q7m_A          262 MWKRELG-SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLYNGNLVVGDSEGY--LHWINVED  337 (376)
T ss_dssp             EEEECCC-CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEETTEEEEECTTSE--EEEEETTT
T ss_pred             EeeccCC-CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeeccc-CCCcccCCEEECCEEEEEeCCCe--EEEEECCC
Confidence            2223322 2334444466777665 458888998766544332211 01122233346899999987544  44456666


Q ss_pred             CeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        157 NQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       157 ~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      +++.--.+- ....+.+.-.+.++++++++.+|.|+.++
T Consensus       338 G~~~~~~~~-~~~~~~~~~~~~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          338 GRFVAQQKV-DSSGFQTEPVAADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CCEEEEEEC-CTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred             CcEEEEEec-CCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence            654322221 11222333344678888889999999885

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=93.00  E-value=2.5  Score=32.83  Aligned_cols=177  Identities=11%  Similarity=0.009  Sum_probs=91.9

Q ss_pred             cceeeccc-CCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee-eEEEeec------
Q psy17021         12 VPYAMCPF-QGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM-EFVHKTS------   82 (199)
Q Consensus        12 ~~~~~~~f-~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl-esVh~~~------   82 (199)
                      .|.+++-- .|+|.++- ++.+..||...++...-....  . ..+.   .+....++++++++.. ..+....      
T Consensus        68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~--~-~~p~---~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~  141 (270)
T 1rwi_B           68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDG--L-NYPE---GLAVDTQGAVYVADRGNNRVVKLAAGSKTQ  141 (270)
T ss_dssp             SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCS--C-SSEE---EEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred             CcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCC--c-CCCc---ceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence            56666543 57888887 478999997654432111011  0 1221   2222223456654311 1111111      


Q ss_pred             ----cC--CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEEEE
Q psy17021         83 ----VD--EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRY  152 (199)
Q Consensus        83 ----~k--G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll~y  152 (199)
                          ..  ..+++++.- +|++.++-  ++.|..|+.......... .. ....+..|....+ .++|+|.... .+.+|
T Consensus       142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~-~~~~p~~i~~d~~g~l~v~~~~~~-~v~~~  218 (270)
T 1rwi_B          142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FT-DITAPWGIAVDEAGTVYVTEHNTN-QVVKL  218 (270)
T ss_dssp             EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CS-SCCSEEEEEECTTCCEEEEETTTS-CEEEE
T ss_pred             EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-cc-CCCCceEEEECCCCCEEEEECCCC-cEEEE
Confidence                11  134444332 57777765  468999988665432221 11 1134677776543 8899997553 24556


Q ss_pred             eCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEc-CCCcEEEEeecC
Q psy17021        153 KRYENQLLIFADDTQPRWITTSCVLDYNTVASAD-KFGNVCIVSTYR  198 (199)
Q Consensus       153 ~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD-~~gNl~vlr~~~  198 (199)
                      +++.......... ...+++++.+-.++.+.++| ..+.|.++++++
T Consensus       219 ~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~  264 (270)
T 1rwi_B          219 LAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE  264 (270)
T ss_dssp             CTTCSCCEECCCC-SCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred             cCCCCcceeeccC-CCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence            6655443332221 22466777664344566665 466788887765

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=92.77  E-value=3.2  Score=33.35  Aligned_cols=183  Identities=15%  Similarity=0.158  Sum_probs=95.9

Q ss_pred             EEecCCCccee--ecccCCEEEEee--------cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEEC--
Q psy17021          5 HKTSVDEVPYA--MCPFQGALLVGV--------GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVG--   72 (199)
Q Consensus         5 h~t~~~~~~~~--~~~f~~~ll~~~--------~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vg--   72 (199)
                      +..++..-|..  +.+-.+++.++.        .+.+.+||+...+.++.-.... -|..+    .+ ...+.++++.  
T Consensus        35 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~----~~-s~dg~~l~v~~~  108 (353)
T 3vgz_A           35 LRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGA----TI-NNTTQTLWFGNT  108 (353)
T ss_dssp             EEEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSE----EE-ETTTTEEEEEET
T ss_pred             hhhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceE----EE-CCCCCEEEEEec
Confidence            34455555654  345556888877        4579999997766665443321 12211    11 1112234332  


Q ss_pred             ----------CeeeEEEeeccCCc----------ce--EEccccCeEEEEe---CCEEEEEEcCCcceeeeeeccCcCce
Q psy17021         73 ----------NAMEFVHKTSVDEV----------PY--AMCPFQGALLVGV---GRYLRLYDLGKKKLLRKCENKHLPNL  127 (199)
Q Consensus        73 ----------dklesVh~~~~kG~----------v~--aL~~f~g~LLaav---g~~v~vy~l~~~~Ll~~~~~~~~~~~  127 (199)
                                +..+.+......+.          +.  ++.|-.++++++-   +++|.+|+....+.............
T Consensus       109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~  188 (353)
T 3vgz_A          109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST  188 (353)
T ss_dssp             TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred             CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence                      11222233333221          22  3333334566665   57799999987766554331111122


Q ss_pred             EEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEec---cCCceeEEEEEEE-eCCeEEEEcCC-CcEEEEe
Q psy17021        128 IVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFAD---DTQPRWITTSCVL-DYNTVASADKF-GNVCIVS  195 (199)
Q Consensus       128 i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var---D~~~~wvta~~~L-d~~t~l~aD~~-gNl~vlr  195 (199)
                      ...+...++++++++.-..+.  .|+...++......   +....++.++.+- |.+.+++++.. +.++++.
T Consensus       189 ~~~~s~dg~~l~~~~~~~~i~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d  259 (353)
T 3vgz_A          189 GLALDSEGKRLYTTNADGELI--TIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD  259 (353)
T ss_dssp             CCEEETTTTEEEEECTTSEEE--EEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred             eEEECCCCCEEEEEcCCCeEE--EEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            334445678999998755554  56776665543322   1234456666665 34456666654 6676664

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=92.61  E-value=6.5  Score=36.56  Aligned_cols=149  Identities=15%  Similarity=0.216  Sum_probs=87.0

Q ss_pred             CcceeecccC-CEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEee-------
Q psy17021         11 EVPYAMCPFQ-GALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKT-------   81 (199)
Q Consensus        11 ~~~~~~~~f~-~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~-------   81 (199)
                      ..+.+++.-+ |+|.+|. ++.|..||.+.++.-.-.... .++.  ..+..+....++++.+|-.-.-+...       
T Consensus       363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~-~~~~--~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~  439 (781)
T 3v9f_A          363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENR-ELLS--NSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF  439 (781)
T ss_dssp             SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC------CCC--SBEEEEEECTTSCEEEEETTEEEEEECSSSCEE
T ss_pred             cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCC-CCCC--cceEEEEECCCCCEEEEeccCCEEEEcCCCCcE
Confidence            4567777764 9999999 788999998764432110000 0111  12444444445677765321111111       


Q ss_pred             -cc------CCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeecc---CcCceEEEEEEe-CCEEEEEeccccEEE
Q psy17021         82 -SV------DEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENK---HLPNLIVKIESM-GHRIYVSDVQESVFL  149 (199)
Q Consensus        82 -~~------kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~---~~~~~i~~l~~~-~~~IlVGD~~~Sv~l  149 (199)
                       .+      ...++++..- +|.|.+|..+-|..|+....+........   .....+.++... ++.|.+|-.-.+  +
T Consensus       440 ~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G--l  517 (781)
T 3v9f_A          440 QIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG--V  517 (781)
T ss_dssp             EECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC--E
T ss_pred             EEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC--E
Confidence             11      2456777655 57899998889999998765543322111   012457777653 567888887666  5


Q ss_pred             EEEeCCCCeEEEEec
Q psy17021        150 VRYKRYENQLLIFAD  164 (199)
Q Consensus       150 l~y~~~~~~l~~var  164 (199)
                      .+|+++.+++..+..
T Consensus       518 ~~~~~~~~~~~~~~~  532 (781)
T 3v9f_A          518 GIYTPDMQLVRKFNQ  532 (781)
T ss_dssp             EEECTTCCEEEEECT
T ss_pred             EEEeCCCCeEEEccC
Confidence            668877777766543

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=92.60  E-value=4.8  Score=35.00  Aligned_cols=106  Identities=13%  Similarity=0.085  Sum_probs=63.9

Q ss_pred             cCCcceEEccc-cCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMCPF-QGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      .++++.++.-- +|+.|| | -+..|++|+...+.+......   ...+.++..  .+.+++.|..-..+.++  +....
T Consensus       384 ~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~---~~~v~~~~~s~d~~~l~~~~~d~~v~~w--~~~~~  458 (577)
T 2ymu_A          384 HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH---SSSVWGVAFSPDDQTIASASDDKTVKLW--NRNGQ  458 (577)
T ss_dssp             CSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEETTSEEEEE--ETTSC
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCC---CCCeEEEEECCCCCEEEEEcCCCEEEEE--ECCCC
Confidence            45666665422 344443 3 367899999755433222222   234566654  46688888877777665  44445


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS  195 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr  195 (199)
                      .+..+..  ....++++.+- |...++.+..++.+.++.
T Consensus       459 ~~~~~~~--~~~~v~~~~~spd~~~las~~~d~~i~iw~  495 (577)
T 2ymu_A          459 LLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWN  495 (577)
T ss_dssp             EEEEEEC--CSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             EEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCCEEEEEc
Confidence            4544433  34567888887 444677788888888764

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=92.55  E-value=5.8  Score=35.84  Aligned_cols=95  Identities=12%  Similarity=0.113  Sum_probs=54.6

Q ss_pred             CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccc---cEEEEEEeCCCC-eEEEEeccCCceeE---EE
Q psy17021        103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQE---SVFLVRYKRYEN-QLLIFADDTQPRWI---TT  173 (199)
Q Consensus       103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~---Sv~ll~y~~~~~-~l~~varD~~~~wv---ta  173 (199)
                      .+|++|++...+............++.++.-  .+++|+++..-+   ...+..|+...+ ....+..+....|+   .+
T Consensus       235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~  314 (706)
T 2z3z_A          235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP  314 (706)
T ss_dssp             EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred             eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence            5688899876654332211112245666654  466788765432   356777887776 66666555455554   44


Q ss_pred             EEEEe--CC-eEEEEcCCCcEEEEeec
Q psy17021        174 SCVLD--YN-TVASADKFGNVCIVSTY  197 (199)
Q Consensus       174 ~~~Ld--~~-t~l~aD~~gNl~vlr~~  197 (199)
                      +.+-.  ++ .++.++.++...++.++
T Consensus       315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~  341 (706)
T 2z3z_A          315 LTFLPGSNNQFIWQSRRDGWNHLYLYD  341 (706)
T ss_dssp             CEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred             ceeecCCCCEEEEEEccCCccEEEEEE
Confidence            55553  43 45566677766666554

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=92.40  E-value=3.2  Score=32.46  Aligned_cols=176  Identities=10%  Similarity=0.036  Sum_probs=94.3

Q ss_pred             Ccceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC--
Q psy17021         11 EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD--   84 (199)
Q Consensus        11 ~~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k--   84 (199)
                      ..|.+++.- +|+|.++.  ++.+..||.. .+..+-.     .|........+....++++++++. -..+.....+  
T Consensus        99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~-----~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~  172 (299)
T 2z2n_A           99 SAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIREYE-----LPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGD  172 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE-----CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC
T ss_pred             CCceeeEECCCCCEEEEecCCceEEEECCC-CCEEEec-----CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCc
Confidence            457776654 58998876  4679999873 2221111     111001111222233346655331 0111111111  


Q ss_pred             ----------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021         85 ----------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV  150 (199)
Q Consensus        85 ----------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll  150 (199)
                                ..+.+++.- +|+|.++-  ++.|..|+. ..++... ........+..+... +..+.+++...+ .+.
T Consensus       173 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~  249 (299)
T 2z2n_A          173 ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF-KIPTPNARPHAITAGAGIDLWFTEWGAN-KIG  249 (299)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTCEEEEETTTT-EEE
T ss_pred             EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE-ECCCCCCCceeEEECCCCCEEEeccCCc-eEE
Confidence                      234444433 46787776  678999988 4443321 111122356777664 346889985532 255


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      +|++ .+++..+.-......+.++.+ +++.+..++..+.+..+...
T Consensus       250 ~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~  294 (299)
T 2z2n_A          250 RLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLI  294 (299)
T ss_dssp             EEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred             EECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence            6676 467766643333456788888 77777777767777776543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=92.36  E-value=1.7  Score=39.36  Aligned_cols=110  Identities=13%  Similarity=0.026  Sum_probs=62.9

Q ss_pred             cCCcceEEc-cc--cC-eEEEEe--CCEEEEEEcCCcceeeeee--ccCcCceEEEEEEeCCEEEEEeccccEEEEEEeC
Q psy17021         83 VDEVPYAMC-PF--QG-ALLVGV--GRYLRLYDLGKKKLLRKCE--NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKR  154 (199)
Q Consensus        83 ~kG~v~aL~-~f--~g-~LLaav--g~~v~vy~l~~~~Ll~~~~--~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~  154 (199)
                      -.++|+++. .+  +| .++|+.  .++|++|++...+......  ........+.....+..++.|+-..+|.+...+.
T Consensus       307 H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~  386 (524)
T 2j04_B          307 HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA  386 (524)
T ss_dssp             SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred             ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence            457788873 33  35 666544  6899999997654322111  1101112233333466888888888887765432


Q ss_pred             CCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021        155 YENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS  195 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr  195 (199)
                       ...+..+..  ...+|+++++= |...++.+-.++.+.+..
T Consensus       387 -~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd  425 (524)
T 2j04_B          387 -AFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITN  425 (524)
T ss_dssp             -TTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred             -cccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence             222223333  34578888875 334677777888776643

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=91.63  E-value=4.7  Score=32.73  Aligned_cols=104  Identities=8%  Similarity=0.048  Sum_probs=60.0

Q ss_pred             cCeEEEEe--CCEEEEEEcC-Ccceeeeeecc-CcCceEEEEEE--eCCEEEEEecc-ccEEEEEEeCCCCeEEEEecc-
Q psy17021         94 QGALLVGV--GRYLRLYDLG-KKKLLRKCENK-HLPNLIVKIES--MGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADD-  165 (199)
Q Consensus        94 ~g~LLaav--g~~v~vy~l~-~~~Ll~~~~~~-~~~~~i~~l~~--~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD-  165 (199)
                      +|+++++-  +++|.+|++. ..++....... .....+..+..  .++++++.+.. ..+.++.++...+++..+..- 
T Consensus       151 dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~  230 (347)
T 3hfq_A          151 DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK  230 (347)
T ss_dssp             TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred             CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee
Confidence            45665554  5689999997 44443332221 11223445554  46678886654 478888888766666544321 


Q ss_pred             CCc------eeEEEEEEEeCC-eEEEEc-CCCcEEEEeec
Q psy17021        166 TQP------RWITTSCVLDYN-TVASAD-KFGNVCIVSTY  197 (199)
Q Consensus       166 ~~~------~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~~  197 (199)
                      ..+      .++.++.+-.+. .+++++ .++.+.++.++
T Consensus       231 ~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~  270 (347)
T 3hfq_A          231 TIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT  270 (347)
T ss_dssp             SSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred             ecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence            111      467777776444 343444 46778888765

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=91.55  E-value=2.5  Score=33.60  Aligned_cols=42  Identities=17%  Similarity=0.126  Sum_probs=25.8

Q ss_pred             eeEEecCCC---cceeec--ccCCEEEEeec--CeeEEEecchhhhhhh
Q psy17021          3 FVHKTSVDE---VPYAMC--PFQGALLVGVG--RYLRLYDLGKKKLLRK   44 (199)
Q Consensus         3 ~~h~t~~~~---~~~~~~--~f~~~ll~~~~--~~l~~y~~g~k~ll~k   44 (199)
                      .++..+...   .|..++  +-..++++...  +.+.+||+...+.++.
T Consensus        23 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~   71 (337)
T 1pby_B           23 VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR   71 (337)
T ss_dssp             EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred             EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee
Confidence            455566665   465544  23336666654  5899999876666553

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=91.55  E-value=3.4  Score=34.87  Aligned_cols=58  Identities=9%  Similarity=-0.020  Sum_probs=32.7

Q ss_pred             EEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        137 RIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       137 ~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      +++.|.--..|.+...++.........-   ..+|+++.+=.+..+|++=.++.+.+.|+.
T Consensus       331 ~~~sgs~Dg~V~lwd~~~~~~~~~~~~~---~~~V~svafspdG~~LA~as~~Gv~lvrL~  388 (393)
T 4gq1_A          331 FATAHSQHGLIQLINTYEKDSNSIPIQL---GMPIVDFCWHQDGSHLAIATEGSVLLTRLM  388 (393)
T ss_dssp             EEEEETTTTEEEEEETTCTTCCEEEEEC---SSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred             EEEEECCCCEEEEEECCCCcEEEEecCC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence            3444554556776655443333333332   237888888755554444456778887763

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=91.46  E-value=5  Score=32.79  Aligned_cols=114  Identities=11%  Similarity=-0.018  Sum_probs=69.9

Q ss_pred             cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe----CCEEEEEeccccEEEEEEeCC
Q psy17021         83 VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM----GHRIYVSDVQESVFLVRYKRY  155 (199)
Q Consensus        83 ~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~----~~~IlVGD~~~Sv~ll~y~~~  155 (199)
                      ..++++++.-- +|.+|++.  .++|++|+....+......+..-...+.++.-.    +.+++.|..-..|.+......
T Consensus       152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~  231 (330)
T 2hes_X          152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD  231 (330)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence            44566665422 34444333  689999998654211112222112246666653    347888888889999887543


Q ss_pred             CC------eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        156 EN------QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       156 ~~------~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ..      .....-.+....+++++.+-++..++.+..+|.+.++..
T Consensus       232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~  278 (330)
T 2hes_X          232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEE  278 (330)
T ss_dssp             CTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEE
T ss_pred             CccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEc
Confidence            21      222222344667899999987778888889999988764

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=91.20  E-value=4.1  Score=35.70  Aligned_cols=58  Identities=10%  Similarity=0.105  Sum_probs=34.9

Q ss_pred             CeEEEE--eCCEEEEEEcCCcceeeeee-ccCcCceEEEEEEeCCEEEEEeccccEEEEEE
Q psy17021         95 GALLVG--VGRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        95 g~LLaa--vg~~v~vy~l~~~~Ll~~~~-~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y  152 (199)
                      |.++|+  -.++|++|++...+++.... ..+.....+.....+.+++.|..=+.|.+..+
T Consensus       295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            334555  37899999998887655432 11111112334445678888887777777654

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=91.10  E-value=5.2  Score=32.30  Aligned_cols=111  Identities=9%  Similarity=-0.032  Sum_probs=65.0

Q ss_pred             CCcceEEccc-cCeEEEEeCCEEEEEEcCCcceeeeeecc-C-cCceEEEEEEe-CCEEEEEecc----------ccEEE
Q psy17021         84 DEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKLLRKCENK-H-LPNLIVKIESM-GHRIYVSDVQ----------ESVFL  149 (199)
Q Consensus        84 kG~v~aL~~f-~g~LLaavg~~v~vy~l~~~~Ll~~~~~~-~-~~~~i~~l~~~-~~~IlVGD~~----------~Sv~l  149 (199)
                      .+.+.++..- +|+|+++.++.|..|++...++....... + ....+..+... +.++.+|++.          .+-.+
T Consensus        53 ~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l  132 (297)
T 3g4e_A           53 DAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGAL  132 (297)
T ss_dssp             SSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEE
T ss_pred             CCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEE
Confidence            4455555543 56788899999999999766554333221 1 12346677664 3468899864          34678


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcC-CCcEEEEeec
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADK-FGNVCIVSTY  197 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~-~gNl~vlr~~  197 (199)
                      ++++++ +++..+..+..  +...+.+- |.++++++|. .+.|+++.++
T Consensus       133 ~~~d~~-g~~~~~~~~~~--~pngi~~spdg~~lyv~~~~~~~i~~~~~d  179 (297)
T 3g4e_A          133 YSLFPD-HHVKKYFDQVD--ISNGLDWSLDHKIFYYIDSLSYSVDAFDYD  179 (297)
T ss_dssp             EEECTT-SCEEEEEEEES--BEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred             EEEECC-CCEEEEeeccc--cccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence            899875 44544444332  33444443 3335556665 3456766653

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=90.96  E-value=5.9  Score=32.72  Aligned_cols=113  Identities=17%  Similarity=0.184  Sum_probs=75.4

Q ss_pred             eEEEeeccCCcce--EEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEE
Q psy17021         76 EFVHKTSVDEVPY--AMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFL  149 (199)
Q Consensus        76 esVh~~~~kG~v~--aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~l  149 (199)
                      +.+...+.+...+  .|.--.|.|..+-|.    +|+.+++...++++..... ...+...+...++++.+.+-..+. +
T Consensus        10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~-v   87 (243)
T 3mbr_X           10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHE-G   87 (243)
T ss_dssp             EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE-E
T ss_pred             EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCE-E
Confidence            4444556665544  333224688888875    8999999988877766654 344577888889999999988776 6


Q ss_pred             EEEeCCCCeE-EEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEE
Q psy17021        150 VRYKRYENQL-LIFADDTQPRWITTSCVLDYNTVASADKFGNVCIV  194 (199)
Q Consensus       150 l~y~~~~~~l-~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vl  194 (199)
                      +.|+.+.-++ ..+.-.. .-|-.+   -|...+++||.++.|+++
T Consensus        88 ~v~D~~tl~~~~ti~~~~-~Gwglt---~dg~~L~vSdgs~~l~~i  129 (243)
T 3mbr_X           88 FVYDLATLTPRARFRYPG-EGWALT---SDDSHLYMSDGTAVIRKL  129 (243)
T ss_dssp             EEEETTTTEEEEEEECSS-CCCEEE---ECSSCEEEECSSSEEEEE
T ss_pred             EEEECCcCcEEEEEeCCC-CceEEe---eCCCEEEEECCCCeEEEE
Confidence            6778765433 3444333 335443   256788899987776654

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=90.95  E-value=7.7  Score=34.01  Aligned_cols=146  Identities=12%  Similarity=0.133  Sum_probs=87.8

Q ss_pred             ceeecccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccCCcceEEcc
Q psy17021         13 PYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVDEVPYAMCP   92 (199)
Q Consensus        13 ~~~~~~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~kG~v~aL~~   92 (199)
                      ..|..+-.|.+.+|-++.+++|++   +-+||+....  +.-                    .+.....+..+ |+++.=
T Consensus        42 lLais~~~gll~a~~~~~l~v~~~---~~l~~~~~~~--~~~--------------------~~~~~~~~lp~-V~~l~f   95 (388)
T 1xip_A           42 NLDISNSKSLFVAASGSKAVVGEL---QLLRDHITSD--STP--------------------LTFKWEKEIPD-VIFVCF   95 (388)
T ss_dssp             CEEEETTTTEEEEEETTEEEEEEH---HHHHHHHHSS--SCC--------------------CCCSEEEECTT-EEEEEE
T ss_pred             EEEEcCCCCEEEEeCCCEEEEEEh---hHhhhhhccc--ccc--------------------ccceEEeeCCC-eeEEEE
Confidence            456778889999999999999987   3455544321  110                    01111123445 666554


Q ss_pred             ccC-eEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeE
Q psy17021         93 FQG-ALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWI  171 (199)
Q Consensus        93 f~g-~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wv  171 (199)
                       +| .|.++.+..|++|+.....  ...........+.++.....-+++++.-.++.++..+  +++...++     -+|
T Consensus        96 -d~~~L~v~~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~--~~~~~~~~-----~~V  165 (388)
T 1xip_A           96 -HGDQVLVSTRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR--TKSTKQLA-----QNV  165 (388)
T ss_dssp             -ETTEEEEEESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETT--TCCEEEEE-----ESE
T ss_pred             -CCCEEEEEcCCcEEEEEchhhh--ccCccceeecceeeEEecCCCEEEEECCCCEEEEEcc--CCcccccc-----CCc
Confidence             65 4567788999999986543  1111111223356777666557777777777777553  44444432     367


Q ss_pred             EEEEEEeCCeEEEEcCCCcEEEEe
Q psy17021        172 TTSCVLDYNTVASADKFGNVCIVS  195 (199)
Q Consensus       172 ta~~~Ld~~t~l~aD~~gNl~vlr  195 (199)
                      +|++.=... ...+-.+|++.++.
T Consensus       166 s~v~WSpkG-~~vg~~dg~i~~~~  188 (388)
T 1xip_A          166 TSFDVTNSQ-LAVLLKDRSFQSFA  188 (388)
T ss_dssp             EEEEECSSE-EEEEETTSCEEEEE
T ss_pred             eEEEEcCCc-eEEEEcCCcEEEEc
Confidence            777775555 56667788888773

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=90.44  E-value=6.3  Score=32.17  Aligned_cols=113  Identities=10%  Similarity=-0.024  Sum_probs=63.4

Q ss_pred             cCCcceEEc--ccc-CeEEE--EeCCEEEEEEcCCcc------eeeeeeccC-cCceEEEEEE-eCCEEEEEeccccEEE
Q psy17021         83 VDEVPYAMC--PFQ-GALLV--GVGRYLRLYDLGKKK------LLRKCENKH-LPNLIVKIES-MGHRIYVSDVQESVFL  149 (199)
Q Consensus        83 ~kG~v~aL~--~f~-g~LLa--avg~~v~vy~l~~~~------Ll~~~~~~~-~~~~i~~l~~-~~~~IlVGD~~~Sv~l  149 (199)
                      ..+.|+++.  |-. +..|+  +-.++|++|++....      ......... ....+.++.- .+.+++.|..-..|.+
T Consensus       196 h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~i  275 (330)
T 2hes_X          196 HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAV  275 (330)
T ss_dssp             CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEE
T ss_pred             CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEE
Confidence            455676654  321 33343  336899999985321      111112211 1123555554 3567888888888888


Q ss_pred             EEEeCCCCeEEEEe---ccCCceeEEEEEEEe---CCeEEEEcCCCcEEEEeec
Q psy17021        150 VRYKRYENQLLIFA---DDTQPRWITTSCVLD---YNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       150 l~y~~~~~~l~~va---rD~~~~wvta~~~Ld---~~t~l~aD~~gNl~vlr~~  197 (199)
                      ....  .+....+.   ..+...+++++.+..   ...++.+..+|.+.+..+.
T Consensus       276 w~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~  327 (330)
T 2hes_X          276 YEEV--DGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE  327 (330)
T ss_dssp             EEEE--TTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred             EEcC--CCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence            7654  33322222   233333788888874   3467778899999988764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=90.38  E-value=7.8  Score=33.12  Aligned_cols=88  Identities=15%  Similarity=0.042  Sum_probs=51.1

Q ss_pred             CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEE-EEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEeC
Q psy17021        103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIY-VSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLDY  179 (199)
Q Consensus       103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~Il-VGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld~  179 (199)
                      ..|++|++...+........   ..+.++.-  .+.+++ .+.--....+..|+...++...+..+  +.+++++.+-.+
T Consensus       203 ~~i~~~d~~tg~~~~l~~~~---~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spd  277 (415)
T 2hqs_A          203 SALVIQTLANGAVRQVASFP---RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPD  277 (415)
T ss_dssp             CEEEEEETTTCCEEEEECCS---SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTT
T ss_pred             cEEEEEECCCCcEEEeecCC---CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCC--CCcccceEECCC
Confidence            48999999766554433332   23444443  466676 45444455677778777776665543  356778877644


Q ss_pred             C-eEE-EEcCCC--cEEEEe
Q psy17021        180 N-TVA-SADKFG--NVCIVS  195 (199)
Q Consensus       180 ~-t~l-~aD~~g--Nl~vlr  195 (199)
                      + .++ +++..+  .|+++.
T Consensus       278 g~~l~~~s~~~g~~~i~~~d  297 (415)
T 2hqs_A          278 SQNLAFTSDQAGRPQVYKVN  297 (415)
T ss_dssp             SSEEEEEECTTSSCEEEEEE
T ss_pred             CCEEEEEECCCCCcEEEEEE
Confidence            4 333 455455  455544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=89.73  E-value=8.1  Score=32.33  Aligned_cols=159  Identities=17%  Similarity=0.124  Sum_probs=99.2

Q ss_pred             eeEEecCCCcc--eeecccCCEEEEeecC----eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeE
Q psy17021          3 FVHKTSVDEVP--YAMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRL   70 (199)
Q Consensus         3 ~~h~t~~~~~~--~~~~~f~~~ll~~~~~----~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~   70 (199)
                      .+.+-+.+..|  ..|.--.|+|.++.|.    .|+.+|+-..+.+++-...  -..|.      ..-+...+|.+++++
T Consensus        33 vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~ly~ltw~~~~v~  110 (262)
T 3nol_A           33 IVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDKIVGLTWKNGLGF  110 (262)
T ss_dssp             EEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC--CccceeEEEEeCCEEEEEEeeCCEEE
Confidence            34445555555  3343337899999996    7999999888887754322  00111      123344456556664


Q ss_pred             E--CCeeeEEEeeccCCcceEEccccCeEEEEeC-CEEEEEEcCCcceeeeeecc--CcC-ceEEEEEEeCCEEEEEecc
Q psy17021         71 V--GNAMEFVHKTSVDEVPYAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENK--HLP-NLIVKIESMGHRIYVSDVQ  144 (199)
Q Consensus        71 v--gdklesVh~~~~kG~v~aL~~f~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~--~~~-~~i~~l~~~~~~IlVGD~~  144 (199)
                      +  -+.++.+-..++.+...++++-.++|.++-| ++|.+++-..-+.++.....  +.+ ..+..+...+.+|.+..-+
T Consensus       111 v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~  190 (262)
T 3nol_A          111 VWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ  190 (262)
T ss_dssp             EEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred             EEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence            3  3457778888888877788866667777663 56888887665554443321  111 3355677678899988866


Q ss_pred             ccEEEEEEeCCCCeEEEEec
Q psy17021        145 ESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus       145 ~Sv~ll~y~~~~~~l~~var  164 (199)
                      .. .+.+.+++.++....-+
T Consensus       191 ~~-~I~vIDp~tG~V~~~Id  209 (262)
T 3nol_A          191 TN-KIVRIDPETGKVTGIID  209 (262)
T ss_dssp             SS-EEEEECTTTCBEEEEEE
T ss_pred             CC-eEEEEECCCCcEEEEEE
Confidence            54 57788888877655443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=89.39  E-value=8.8  Score=32.28  Aligned_cols=154  Identities=15%  Similarity=0.133  Sum_probs=98.7

Q ss_pred             eEEecCCCcc--eeecccCCEEEEeecC--eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEE--
Q psy17021          4 VHKTSVDEVP--YAMCPFQGALLVGVGR--YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLV--   71 (199)
Q Consensus         4 ~h~t~~~~~~--~~~~~f~~~ll~~~~~--~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~v--   71 (199)
                      +.+-+.+..|  ..|.--.++|.++.|.  .|+.+|+-..|.+++- ..  -..|.      ...+...+|.++++++  
T Consensus        46 v~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D  122 (268)
T 3nok_A           46 IREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL--GNIFAEGLASDGERLYQLTWTEGLLFTWS  122 (268)
T ss_dssp             EEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred             EEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence            3444455545  3444447899999996  6999999888887765 21  01111      1233445666666644  


Q ss_pred             CCeeeEEEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccC--cC-ceEEEEEEeCCEEEEEeccccE
Q psy17021         72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKH--LP-NLIVKIESMGHRIYVSDVQESV  147 (199)
Q Consensus        72 gdklesVh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~--~~-~~i~~l~~~~~~IlVGD~~~Sv  147 (199)
                      .+.++.+-..++.+...++++-.++|.++- .++|.+++-..-+.++......  .+ ..+..|...+.+|.++.-... 
T Consensus       123 ~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~-  201 (268)
T 3nok_A          123 GMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSS-  201 (268)
T ss_dssp             TTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCS-
T ss_pred             CCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCC-
Confidence            346788888888888888887667787776 4778888876655544333211  11 245667777889998886554 


Q ss_pred             EEEEEeCCCCeEEE
Q psy17021        148 FLVRYKRYENQLLI  161 (199)
Q Consensus       148 ~ll~y~~~~~~l~~  161 (199)
                      .+.+.+++.++...
T Consensus       202 ~I~vIDp~TG~V~~  215 (268)
T 3nok_A          202 DVLEIDPATGTVVG  215 (268)
T ss_dssp             EEEEECTTTCBEEE
T ss_pred             eEEEEeCCCCcEEE
Confidence            57777887775543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=89.26  E-value=7.3  Score=31.15  Aligned_cols=119  Identities=10%  Similarity=0.084  Sum_probs=68.9

Q ss_pred             eEEEeeccCCcceEEc--cccCeEEEEeC--CEEEEEEcCCcceeeeeeccC-------cCceEEEEEE--eCCEEEEEe
Q psy17021         76 EFVHKTSVDEVPYAMC--PFQGALLVGVG--RYLRLYDLGKKKLLRKCENKH-------LPNLIVKIES--MGHRIYVSD  142 (199)
Q Consensus        76 esVh~~~~kG~v~aL~--~f~g~LLaavg--~~v~vy~l~~~~Ll~~~~~~~-------~~~~i~~l~~--~~~~IlVGD  142 (199)
                      +.+......+.+.++.  +=.++++++-.  +.|.+|+....+.+.......       .+..+..+..  .++++++++
T Consensus        80 ~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  159 (353)
T 3vgz_A           80 EVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISG  159 (353)
T ss_dssp             CEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEE
T ss_pred             eEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEe
Confidence            3344444444444433  32234666654  799999998766555433321       1122555554  578999999


Q ss_pred             ccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEe
Q psy17021        143 VQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVS  195 (199)
Q Consensus       143 ~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr  195 (199)
                      ....-.+..|+....+....-.. ...++.++.+- |.+.+++++.+++++++.
T Consensus       160 ~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d  212 (353)
T 3vgz_A          160 IGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITID  212 (353)
T ss_dssp             ESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred             cCCCceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEE
Confidence            76555677788777766544331 12233444444 445688888888887764

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=88.98  E-value=8.2  Score=31.40  Aligned_cols=96  Identities=17%  Similarity=0.125  Sum_probs=55.4

Q ss_pred             eEEEEe--CCEEEEEEcCCcce---eeeeeccCcCceEEEEEEe-CCEEEEEeccc---------cEEEEEEeCCCCeEE
Q psy17021         96 ALLVGV--GRYLRLYDLGKKKL---LRKCENKHLPNLIVKIESM-GHRIYVSDVQE---------SVFLVRYKRYENQLL  160 (199)
Q Consensus        96 ~LLaav--g~~v~vy~l~~~~L---l~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~---------Sv~ll~y~~~~~~l~  160 (199)
                      .|.++-  +++|..|++....+   .....   .+. +..+... +..+.|++...         +-.+.+|+++...+.
T Consensus       198 ~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~  273 (322)
T 2fp8_A          198 FVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILE  273 (322)
T ss_dssp             EEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEE
T ss_pred             EEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEE
Confidence            366653  47899999864321   11111   122 5555553 23578888762         456889998766555


Q ss_pred             EEeccCC--ceeEEEEEEEeCCeEEEEcCCCc-EEEEee
Q psy17021        161 IFADDTQ--PRWITTSCVLDYNTVASADKFGN-VCIVST  196 (199)
Q Consensus       161 ~varD~~--~~wvta~~~Ld~~t~l~aD~~gN-l~vlr~  196 (199)
                      .+.....  ..+++++.+ +++++.+++...| |..+++
T Consensus       274 ~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~  311 (322)
T 2fp8_A          274 VIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY  311 (322)
T ss_dssp             EEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred             EEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence            5543221  457777765 6777777776554 555544

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=88.74  E-value=7.8  Score=30.82  Aligned_cols=60  Identities=17%  Similarity=0.264  Sum_probs=34.6

Q ss_pred             cCe-EEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCC
Q psy17021         94 QGA-LLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        94 ~g~-LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      +|+ ++++ .++|.+|++...++++...... ...-..+...+++++++..-.++.++  +.+..
T Consensus       266 dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~v~v~--d~~~~  326 (349)
T 1jmx_B          266 DPNQIYGV-LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVF--NPDTL  326 (349)
T ss_dssp             CTTEEEEE-ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSSSCEEEESBSSEEEEE--ETTTT
T ss_pred             CCCEEEEE-cCeEEEEECccCeEEEEEcCCC-CccceEECCCCCEEEEecCCCeEEEE--ecccc
Confidence            454 4455 8899999998777655443321 12233333346778887655555554  44443

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=87.94  E-value=7.7  Score=31.75  Aligned_cols=90  Identities=16%  Similarity=0.117  Sum_probs=53.9

Q ss_pred             CEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEEEeCCCC--eEEEEec-------cCCceeEE
Q psy17021        103 RYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVRYKRYEN--QLLIFAD-------DTQPRWIT  172 (199)
Q Consensus       103 ~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~--~l~~var-------D~~~~wvt  172 (199)
                      ++|.+|+....++++..... ....+..+... +..++|.|.... .+.+|+++..  .+..++.       +..-.+..
T Consensus        69 ~~i~~~d~~~g~~~~~~~~~-~~~~p~gia~d~~g~l~v~d~~~~-~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~  146 (329)
T 3fvz_A           69 DTILVIDPNNAEILQSSGKN-LFYLPHGLSIDTDGNYWVTDVALH-QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT  146 (329)
T ss_dssp             CCEEEECTTTCCEEEEECTT-TCSSEEEEEECTTSCEEEEETTTT-EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred             CcEEEEECCCCeEEeccCCC-ccCCceEEEECCCCCEEEEECCCC-EEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence            46788887655654432211 22346666654 334889998765 3677887655  4566654       33344677


Q ss_pred             EEEEEe-CCeEEEEcC--CCcEEEE
Q psy17021        173 TSCVLD-YNTVASADK--FGNVCIV  194 (199)
Q Consensus       173 a~~~Ld-~~t~l~aD~--~gNl~vl  194 (199)
                      ++.+-. ++.++++|.  .+.|.++
T Consensus       147 ~ia~~~~~g~lyv~d~~~~~~I~~~  171 (329)
T 3fvz_A          147 DVAVEPSTGAVFVSDGYCNSRIVQF  171 (329)
T ss_dssp             EEEECTTTCCEEEEECSSCCEEEEE
T ss_pred             EEEEeCCCCeEEEEeCCCCCeEEEE
Confidence            777754 668888895  3444444

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=87.66  E-value=9.7  Score=30.64  Aligned_cols=173  Identities=9%  Similarity=0.045  Sum_probs=89.6

Q ss_pred             cCCCcceeeccc-CCEEEEeecCeeEEEecchhhh--hhhhhhcccccCceeeeeEEEEEcCceeEECCee---------
Q psy17021          8 SVDEVPYAMCPF-QGALLVGVGRYLRLYDLGKKKL--LRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM---------   75 (199)
Q Consensus         8 ~~~~~~~~~~~f-~~~ll~~~~~~l~~y~~g~k~l--l~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl---------   75 (199)
                      .....|.+++.- +|+|+++.++.|..||....++  +...+..  .|.  ..+-......++|+++++.-         
T Consensus        51 ~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~~~--~~~--~~~~di~~d~dG~l~~~~~~~~~~~~~~~  126 (297)
T 3g4e_A           51 TMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDND--KKN--NRFNDGKVDPAGRYFAGTMAEETAPAVLE  126 (297)
T ss_dssp             ECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECCTT--CSS--EEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred             eCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecCCC--CCC--CCCCCEEECCCCCEEEecCCccccccccc
Confidence            345667766543 6889999999999999854333  2111111  010  11222333345678776521         


Q ss_pred             ---eEEEeeccCCcc----------eEEccc-cCe-EEEEe--CCEEEEEEcC--Ccceee-eee--ccCcCceEEEEEE
Q psy17021         76 ---EFVHKTSVDEVP----------YAMCPF-QGA-LLVGV--GRYLRLYDLG--KKKLLR-KCE--NKHLPNLIVKIES  133 (199)
Q Consensus        76 ---esVh~~~~kG~v----------~aL~~f-~g~-LLaav--g~~v~vy~l~--~~~Ll~-~~~--~~~~~~~i~~l~~  133 (199)
                         ..++...-+|.+          +.++-- .|+ |.++-  +++|..|++.  ..++.. ...  .......+..+..
T Consensus       127 ~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~  206 (297)
T 3g4e_A          127 RHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI  206 (297)
T ss_dssp             TTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred             CCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence               234444334432          222211 243 54443  5788899883  333321 111  1111234666665


Q ss_pred             e-CCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE--eCCeEEEEc
Q psy17021        134 M-GHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL--DYNTVASAD  186 (199)
Q Consensus       134 ~-~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L--d~~t~l~aD  186 (199)
                      . +..+.|++...+ .+.+|+++.+++...-.- ...+++++.|-  |.+++.++.
T Consensus       207 d~~G~lwva~~~~~-~v~~~d~~tG~~~~~i~~-p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          207 DAEGKLWVACYNGG-RVIRLDPVTGKRLQTVKL-PVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             BTTSCEEEEEETTT-EEEEECTTTCCEEEEEEC-SSSBEEEEEEESGGGCEEEEEE
T ss_pred             CCCCCEEEEEcCCC-EEEEEcCCCceEEEEEEC-CCCCceEEEEeCCCCCEEEEEc
Confidence            3 346788886655 378899875554333222 23578999986  334554444

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=87.38  E-value=18  Score=33.55  Aligned_cols=170  Identities=14%  Similarity=0.061  Sum_probs=92.4

Q ss_pred             Ccceeec-ccCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEee--------
Q psy17021         11 EVPYAMC-PFQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKT--------   81 (199)
Q Consensus        11 ~~~~~~~-~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~--------   81 (199)
                      ..+.++. .=+|+|.+|..+.|..||.-..+..+-..... .+..+  +..+....++++.++-. ..+...        
T Consensus        88 n~I~~i~~d~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~-~~~~~--i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~~~  163 (795)
T 4a2l_A           88 DISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKN-GKHLQ--VNGIEEISPEQLLISTP-EGLIMFDIKESKFI  163 (795)
T ss_dssp             SCEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCEET-TEECC--CCEEEEEETTEEEEEET-TEEEEEETTTTEEE
T ss_pred             cceeEEEECCCCCEEEEeCCchheeCCCCCeEEecccccc-CCCce--EEEEEECCCCCEEEEEC-CceEEEECCCCEEE
Confidence            3455665 44689999999999999975443321000000 00110  33444445567766532 112211        


Q ss_pred             ccCC-----c-ceEEccc-cCeEEEEeC-CEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEE
Q psy17021         82 SVDE-----V-PYAMCPF-QGALLVGVG-RYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRY  152 (199)
Q Consensus        82 ~~kG-----~-v~aL~~f-~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y  152 (199)
                      .+..     . +.++..- +|.|.+|.. +.|..|+...+++....... ....+.++.. .++.+.+|....+  +++|
T Consensus       164 ~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~-~~~~i~~i~~d~~g~lwigt~~~G--l~~~  240 (795)
T 4a2l_A          164 DDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPIL-GTKQIQAILQQSPTRIWVATEGAG--LFLI  240 (795)
T ss_dssp             CSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEEEEBSSC--EEEE
T ss_pred             eccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCC-CCCeeEEEEEcCCCCEEEEECCCC--eEEE
Confidence            1111     1 5565543 678888885 57888988766543321111 1234666654 4677889886666  5667


Q ss_pred             eCCCCeEEEEeccC------CceeEEEEEEEeCC-eEEEEcC
Q psy17021        153 KRYENQLLIFADDT------QPRWITTSCVLDYN-TVASADK  187 (199)
Q Consensus       153 ~~~~~~l~~varD~------~~~wvta~~~Ld~~-t~l~aD~  187 (199)
                      ++..+++..+..+.      ....+.++..-.++ -++|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~  282 (795)
T 4a2l_A          241 NPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN  282 (795)
T ss_dssp             ETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS
T ss_pred             eCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC
Confidence            87777777665432      23456665443222 4666654

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=87.32  E-value=13  Score=31.72  Aligned_cols=106  Identities=9%  Similarity=0.011  Sum_probs=58.6

Q ss_pred             CCcceEEccc-cCe-EEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccc-cEEEEEEeC
Q psy17021         84 DEVPYAMCPF-QGA-LLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQE-SVFLVRYKR  154 (199)
Q Consensus        84 kG~v~aL~~f-~g~-LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~-Sv~ll~y~~  154 (199)
                      .+.+.++.-- +|+ |+.+.+.    +|.+|++...+..+....   ..++.++.  ..+++|+++.... ...+..|+.
T Consensus       266 ~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~  342 (415)
T 2hqs_A          266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL  342 (415)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---SSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred             CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---CCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence            3445544322 355 5555432    688888876554332221   23444444  3577888776543 356777887


Q ss_pred             CCCeEEEEeccCCceeEEEEEEEeC-CeEEEEcCCC---cEEEEe
Q psy17021        155 YENQLLIFADDTQPRWITTSCVLDY-NTVASADKFG---NVCIVS  195 (199)
Q Consensus       155 ~~~~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~g---Nl~vlr  195 (199)
                      +.++...+....   ++.++.+-.+ ..++.+..++   .|+++.
T Consensus       343 ~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d  384 (415)
T 2hqs_A          343 ATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVS  384 (415)
T ss_dssp             TTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             CCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEE
Confidence            777776666543   6777777633 4444443333   455553

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=86.71  E-value=12  Score=30.80  Aligned_cols=140  Identities=14%  Similarity=0.157  Sum_probs=94.0

Q ss_pred             CCEEEEeecC----eeEEEecchhhhhhhhhhcccccCce------eeeeEEEEEcCceeEE--CCeeeEEEeeccCCcc
Q psy17021         20 QGALLVGVGR----YLRLYDLGKKKLLRKCENKVRIKGFR------KAHQTHTHSGRSDRLV--GNAMEFVHKTSVDEVP   87 (199)
Q Consensus        20 ~~~ll~~~~~----~l~~y~~g~k~ll~k~~~~~~~~~~~------~~~~~~~~~~~~ri~v--gdklesVh~~~~kG~v   87 (199)
                      .++|.++.|.    .|+.+|+-..+++++-....  ..|-      ...+...+|.++++++  .+.++.+-..++.+..
T Consensus        30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G  107 (243)
T 3mbr_X           30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG  107 (243)
T ss_dssp             TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC
T ss_pred             CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc
Confidence            5899999996    79999998888877543220  0111      1233445666666644  4468888888899988


Q ss_pred             eEEccccCeEEEEeC-CEEEEEEcCCcceeeeeeccC--cC-ceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021         88 YAMCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKH--LP-NLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        88 ~aL~~f~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~--~~-~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v  162 (199)
                      .++++-.++|.++=| ++|.+++-..-+.++.....+  .+ ..+..|...+.+|++..-+.. .+.+.++..++....
T Consensus       108 wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~-~I~vIDp~tG~V~~~  185 (243)
T 3mbr_X          108 WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTS-RIARIDPASGKVVAW  185 (243)
T ss_dssp             CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTT-EEEEECTTTCBEEEE
T ss_pred             eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCC-eEEEEECCCCCEEEE
Confidence            999977778887764 678778776655544433321  11 246677778889998886544 677778887765443

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=86.57  E-value=11  Score=30.33  Aligned_cols=86  Identities=12%  Similarity=0.059  Sum_probs=52.2

Q ss_pred             cCe-EEEEe--CCEEEEEEcCCc-ceeeeeeccCcCceEEEEE--EeCCEEEEEecc-ccEEEEEEeCCCCeEEEEeccC
Q psy17021         94 QGA-LLVGV--GRYLRLYDLGKK-KLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADDT  166 (199)
Q Consensus        94 ~g~-LLaav--g~~v~vy~l~~~-~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD~  166 (199)
                      +|+ |.++-  +++|.+|++... ++............+..+.  ..+.++++++.. .++.+++.+.+.+++..+....
T Consensus       250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~  329 (347)
T 3hfq_A          250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDV  329 (347)
T ss_dssp             TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred             CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecccce
Confidence            354 54443  588999999633 3322222221112233443  457789999876 6899999998889998888654


Q ss_pred             CceeEEEEEEEeC
Q psy17021        167 QPRWITTSCVLDY  179 (199)
Q Consensus       167 ~~~wvta~~~Ld~  179 (199)
                      .----.++.+|.+
T Consensus       330 ~~p~p~~~~~~~~  342 (347)
T 3hfq_A          330 TVPEGVCVRFLEH  342 (347)
T ss_dssp             ECTTEEEEEECC-
T ss_pred             ecCCCcEEEehhh
Confidence            4444455555543

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=86.50  E-value=13  Score=31.01  Aligned_cols=113  Identities=16%  Similarity=0.090  Sum_probs=71.8

Q ss_pred             eeEEEeeccCCcc--eEEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEE
Q psy17021         75 MEFVHKTSVDEVP--YAMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVF  148 (199)
Q Consensus        75 lesVh~~~~kG~v--~aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~  148 (199)
                      .+.+...+.+...  ..|.--+|.|..+-|.    +|+.+++...++++..... ...+...+...++++.+.+-..+. 
T Consensus        31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~-  108 (262)
T 3nol_A           31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL-  108 (262)
T ss_dssp             EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE-
T ss_pred             eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE-
Confidence            4555556666655  2233225678888764    8999999988877766554 344577888889999999988776 


Q ss_pred             EEEEeCCCC-eEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEE
Q psy17021        149 LVRYKRYEN-QLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCI  193 (199)
Q Consensus       149 ll~y~~~~~-~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~v  193 (199)
                      ++.|+.+.. .+..+.-.. .-|-.+   =|.+.++.+|....|++
T Consensus       109 v~v~D~~t~~~~~ti~~~~-eG~glt---~dg~~L~~SdGs~~i~~  150 (262)
T 3nol_A          109 GFVWNIRNLRQVRSFNYDG-EGWGLT---HNDQYLIMSDGTPVLRF  150 (262)
T ss_dssp             EEEEETTTCCEEEEEECSS-CCCCEE---ECSSCEEECCSSSEEEE
T ss_pred             EEEEECccCcEEEEEECCC-CceEEe---cCCCEEEEECCCCeEEE
Confidence            667787653 334444332 224333   14556777776554443

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=85.78  E-value=10  Score=28.95  Aligned_cols=97  Identities=11%  Similarity=-0.090  Sum_probs=56.1

Q ss_pred             eEEEEeCCEEEEEEcCC-cceeeeeeccCcCceE--EEEEEeCCEEEEEecc--ccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021         96 ALLVGVGRYLRLYDLGK-KKLLRKCENKHLPNLI--VKIESMGHRIYVSDVQ--ESVFLVRYKRYENQLLIFADDTQPRW  170 (199)
Q Consensus        96 ~LLaavg~~v~vy~l~~-~~Ll~~~~~~~~~~~i--~~l~~~~~~IlVGD~~--~Sv~ll~y~~~~~~l~~varD~~~~w  170 (199)
                      +|+++-..+|++|++.. .+........ ....+  ......+.+++++.-.  ....+..++...++...+.....   
T Consensus        55 ~l~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---  130 (297)
T 2ojh_A           55 YLLLNSEGLLYRLSLAGDPSPEKVDTGF-ATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---  130 (297)
T ss_dssp             EEEEEETTEEEEEESSSCCSCEECCCTT-CCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---
T ss_pred             EEEEEcCCeEEEEeCCCCCCceEecccc-ccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---
Confidence            56667788999999977 5543322111 11223  2333456788887733  46777888766666666655443   


Q ss_pred             EEEEEEE-eCCeEE-EEcCCCcEEEEee
Q psy17021        171 ITTSCVL-DYNTVA-SADKFGNVCIVST  196 (199)
Q Consensus       171 vta~~~L-d~~t~l-~aD~~gNl~vlr~  196 (199)
                      +.++.+- |...++ .+..++.+.++.+
T Consensus       131 ~~~~~~spdg~~l~~~~~~~~~~~l~~~  158 (297)
T 2ojh_A          131 SYWHGWSPDGKSFTYCGIRDQVFDIYSM  158 (297)
T ss_dssp             EEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred             ccceEECCCCCEEEEEECCCCceEEEEE
Confidence            5555555 333444 5666675555554

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=85.34  E-value=11  Score=29.17  Aligned_cols=167  Identities=11%  Similarity=0.012  Sum_probs=82.7

Q ss_pred             Ccceeeccc-CCEEEEee--cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEeeccC--
Q psy17021         11 EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKTSVD--   84 (199)
Q Consensus        11 ~~~~~~~~f-~~~ll~~~--~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~~~k--   84 (199)
                      ..|.+++.- .|++.++.  ++.+..||.. .++.+..     .|........+....++++++++. -..+.....+  
T Consensus       104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-----~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~  177 (300)
T 2qc5_A          104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-----LPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGK  177 (300)
T ss_dssp             CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-----CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC
T ss_pred             CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-----CCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCc
Confidence            457776644 68888876  4678888865 3322111     111001111222223345655331 1111111111  


Q ss_pred             ----------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021         85 ----------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV  150 (199)
Q Consensus        85 ----------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll  150 (199)
                                ..+.+++.- +|.|.++-  ++.|..|+.. .++.... .......+..+... ++.+.++|...+ .+.
T Consensus       178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~  254 (300)
T 2qc5_A          178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEISEYD-IPTPNARPHAITAGKNSEIWFTEWGAN-QIG  254 (300)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTTT-EEE
T ss_pred             EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEEEEE-CCCCCCCceEEEECCCCCEEEeccCCC-eEE
Confidence                      234444432 56787776  4678888873 3332221 11112346677664 346889996532 356


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK  187 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~  187 (199)
                      +|++ .+++..+.-.....++.++..-.++.+..++.
T Consensus       255 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~  290 (300)
T 2qc5_A          255 RITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK  290 (300)
T ss_dssp             EECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred             EECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence            6777 45565554332234455665543456666666

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=85.30  E-value=11  Score=29.02  Aligned_cols=173  Identities=14%  Similarity=0.038  Sum_probs=78.6

Q ss_pred             cceeecc-cCCEEEE-e--ecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEEeeccC---
Q psy17021         12 VPYAMCP-FQGALLV-G--VGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVHKTSVD---   84 (199)
Q Consensus        12 ~~~~~~~-f~~~ll~-~--~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh~~~~k---   84 (199)
                      .|.+++. =.|+|.+ +  -++.|..||.+.++.-.......   ..+.   .+....++++++++.-..+.....+   
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~p~---~i~~~~~g~l~v~~~~~~i~~~d~~~~~   98 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---YQPQ---GLAVDGAGTVYVTDFNNRVVTLAAGSNN   98 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSC---CSCC---CEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc---CCcc---eeEECCCCCEEEEcCCCEEEEEeCCCce
Confidence            6666654 3578888 5  34789999987654321111110   1121   2222223456554321122222211   


Q ss_pred             ---------CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEEE
Q psy17021         85 ---------EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLVR  151 (199)
Q Consensus        85 ---------G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll~  151 (199)
                               ..+.++.-- +|++.++-  ++.|..|+.+....... ... ....+..+... ++.++++|...+ .+.+
T Consensus        99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~p~~i~~~~~g~l~v~~~~~~-~i~~  175 (270)
T 1rwi_B           99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-PFT-GLNDPDGVAVDNSGNVYVTDTDNN-RVVK  175 (270)
T ss_dssp             CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-CCC-SCCSCCCEEECTTCCEEEEEGGGT-EEEE
T ss_pred             EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee-ccc-cCCCceeEEEeCCCCEEEEECCCC-EEEE
Confidence                     234444322 56777764  46788886654332111 111 11234445443 345888887653 3566


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC-CCcEEEE
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK-FGNVCIV  194 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~-~gNl~vl  194 (199)
                      |+............ ......++.+=.++.+.++|. .+.|..+
T Consensus       176 ~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~  218 (270)
T 1rwi_B          176 LEAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKL  218 (270)
T ss_dssp             ECTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred             EecCCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence            77665544332211 113455554422235555554 3345544

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=85.28  E-value=11  Score=36.04  Aligned_cols=109  Identities=15%  Similarity=0.156  Sum_probs=68.6

Q ss_pred             ccCCcceEEccc-cCeEEE-Ee-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         82 SVDEVPYAMCPF-QGALLV-GV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        82 ~~kG~v~aL~~f-~g~LLa-av-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..++.|++++-= .|++|| |- ..+|++|+....+.......   ...|.++.- .+.+++.|+.-.+|.+...+. ..
T Consensus        15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~---~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~-~~   90 (902)
T 2oaj_A           15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLED---RSAIKEMRFVKGIYLVVINAKDTVYVLSLYS-QK   90 (902)
T ss_dssp             ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSS---CCCEEEEEEETTTEEEEEETTCEEEEEETTT-CS
T ss_pred             CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCC---CCCEEEEEEcCCCEEEEEECcCeEEEEECCC-Cc
Confidence            345666665422 244443 33 57999999876554332211   234666653 367899999888888776532 23


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      .+..+.   .+.+++++.+- |.+.++.++.+|++.++.++
T Consensus        91 ~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~  128 (902)
T 2oaj_A           91 VLTTVF---VPGKITSIDTDASLDWMLIGLQNGSMIVYDID  128 (902)
T ss_dssp             EEEEEE---CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred             EEEEEc---CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence            333332   34578998887 44578889999999988653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=84.91  E-value=13  Score=29.32  Aligned_cols=86  Identities=15%  Similarity=0.104  Sum_probs=48.1

Q ss_pred             EEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCC
Q psy17021        104 YLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYN  180 (199)
Q Consensus       104 ~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~  180 (199)
                      .|.+|++...++... ........+.++..  .+.+++++|  .  .+..|+...++....-..  ..++.++.+- |.+
T Consensus       220 ~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~--~--~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~  292 (337)
T 1pby_B          220 GLLTMDLETGEMAMR-EVRIMDVFYFSTAVNPAKTRAFGAY--N--VLESFDLEKNASIKRVPL--PHSYYSVNVSTDGS  292 (337)
T ss_dssp             EEEEEETTTCCEEEE-EEEECSSCEEEEEECTTSSEEEEEE--S--EEEEEETTTTEEEEEEEC--SSCCCEEEECTTSC
T ss_pred             ceEEEeCCCCCceEe-ecCCCCCceeeEEECCCCCEEEEeC--C--eEEEEECCCCcCcceecC--CCceeeEEECCCCC
Confidence            578888877665422 22112223444444  467888884  3  455667666655433221  2234555655 344


Q ss_pred             eEEEEcCCCcEEEEee
Q psy17021        181 TVASADKFGNVCIVST  196 (199)
Q Consensus       181 t~l~aD~~gNl~vlr~  196 (199)
                      .++++..++++.++..
T Consensus       293 ~l~~~~~~~~i~v~d~  308 (337)
T 1pby_B          293 TVWLGGALGDLAAYDA  308 (337)
T ss_dssp             EEEEESBSSEEEEEET
T ss_pred             EEEEEcCCCcEEEEEC
Confidence            5666777788888754

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=83.53  E-value=17  Score=29.72  Aligned_cols=114  Identities=11%  Similarity=-0.007  Sum_probs=69.4

Q ss_pred             CCcceEEccc-cCe-EEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC-
Q psy17021         84 DEVPYAMCPF-QGA-LLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN-  157 (199)
Q Consensus        84 kG~v~aL~~f-~g~-LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~-  157 (199)
                      .+.++++.-- +|. |++| -.+++++|+....+.........-...|.++.-  .+++++.|..-..|.+.+.....+ 
T Consensus       150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~  229 (345)
T 3fm0_A          150 TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNE  229 (345)
T ss_dssp             CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCT
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCC
Confidence            4456655432 244 4433 368899999976653332333322234666665  477999999999999987532211 


Q ss_pred             ------------eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 ------------QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ------------~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                                  +.......+....++++.+- +...++.+..++.+.++...
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~  282 (345)
T 3fm0_A          230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED  282 (345)
T ss_dssp             TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred             ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence                        11222234456778888886 34467888888888887653

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=83.52  E-value=14  Score=28.67  Aligned_cols=175  Identities=11%  Similarity=0.076  Sum_probs=86.1

Q ss_pred             CCcceeecc-cCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEee----
Q psy17021         10 DEVPYAMCP-FQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHKT----   81 (199)
Q Consensus        10 ~~~~~~~~~-f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~~----   81 (199)
                      ...|.+++. =+|++.++..  +.+..||.. .++.+-   .  .|........+....++++++++. -..+...    
T Consensus        19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~---~--~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g   92 (300)
T 2qc5_A           19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEF---E--VPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKKG   92 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE---E--CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred             CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEE---E--CCCCCCcceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence            347777764 3688988874  789999976 333221   1  111111122222223345555322 1112111    


Q ss_pred             -----cc---CCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEE
Q psy17021         82 -----SV---DEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFL  149 (199)
Q Consensus        82 -----~~---kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~l  149 (199)
                           ..   ...+.++..- +|++.++-  ++.|..|+.. .++.... .......+..+... ++.+.++|...+ .+
T Consensus        93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i  169 (300)
T 2qc5_A           93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQNN-SI  169 (300)
T ss_dssp             CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTTT-EE
T ss_pred             CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCCC-eE
Confidence                 11   1334554433 56777766  5678888776 3333221 11112346666653 344888887543 36


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCc-EEEE
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGN-VCIV  194 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gN-l~vl  194 (199)
                      .+|++ .+++..+.-.....+..++.+=.++.+.+++..++ ++.+
T Consensus       170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~  214 (300)
T 2qc5_A          170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRI  214 (300)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred             EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEE
Confidence            67776 55555554333334455554432334555554433 4443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=83.13  E-value=16  Score=29.02  Aligned_cols=123  Identities=11%  Similarity=0.087  Sum_probs=59.9

Q ss_pred             eeecc-cCCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCeeeEEE----------eec
Q psy17021         14 YAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAMEFVH----------KTS   82 (199)
Q Consensus        14 ~~~~~-f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdklesVh----------~~~   82 (199)
                      .++.. -+|+|.+|..+ |..||. ..+.+.+-.........+    ..  . ++++++|..-..+.          ...
T Consensus        63 ~~~~~~~~g~l~v~t~~-l~~~d~-~g~~~~~~~~~~~~~~~~----~~--~-~~~l~v~t~~~~l~~~d~~g~~~~~~~  133 (330)
T 3hxj_A           63 CRPSIGKDGTIYFGSDK-VYAINP-DGTEKWRFDTKKAIVSDF----TI--F-EDILYVTSMDGHLYAINTDGTEKWRFK  133 (330)
T ss_dssp             ECCEETTTTEECCSSCE-EEEECC-CGGGGGGSCC-----CCE----EE--E-TTEEEEECTTSEEEEECTTSCEEEEEE
T ss_pred             cceEEecCCcEEEecCc-EEEECC-CCcEEEEEECCCCcccCc----eE--E-CCEEEEEecCCEEEEEcCCCCEEEEEc
Confidence            44444 38999999988 888886 333443322221011111    11  1 46676643211122          222


Q ss_pred             cCC-cceEEccc-cCeEEEEeC-CEEEEEEcCCcceeeeeeccCcCceEEEEEE-eCCEEEEEeccccEEEE
Q psy17021         83 VDE-VPYAMCPF-QGALLVGVG-RYLRLYDLGKKKLLRKCENKHLPNLIVKIES-MGHRIYVSDVQESVFLV  150 (199)
Q Consensus        83 ~kG-~v~aL~~f-~g~LLaavg-~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~-~~~~IlVGD~~~Sv~ll  150 (199)
                      ..+ .+.++..- +|.|.+|.. +.|..|+.. .+++......  ...+.++.. .++.+.+|.  ..+..+
T Consensus       134 ~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~--~~~~~~~~~d~~g~l~v~t--~~l~~~  200 (330)
T 3hxj_A          134 TKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTN--DAITSAASIGKDGTIYFGS--DKVYAI  200 (330)
T ss_dssp             CSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECS--SCCCSCCEECTTCCEEEES--SSEEEE
T ss_pred             CCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecC--CCceeeeEEcCCCEEEEEe--CEEEEE
Confidence            222 22333333 577888875 888888887 4433322222  112333333 356677887  554433

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=82.74  E-value=16  Score=28.94  Aligned_cols=104  Identities=14%  Similarity=0.075  Sum_probs=55.9

Q ss_pred             EEccccCeEEEEeCC----EEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEecc-cc-EEEEEEeCCCCeEE
Q psy17021         89 AMCPFQGALLVGVGR----YLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQ-ES-VFLVRYKRYENQLL  160 (199)
Q Consensus        89 aL~~f~g~LLaavg~----~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~-~S-v~ll~y~~~~~~l~  160 (199)
                      ++.|=..+++++-+.    +|.+|++...+.++....   ...+.++..  .++++++++.. .. +.++.+++.. .+.
T Consensus        90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~  165 (331)
T 3u4y_A           90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLF  165 (331)
T ss_dssp             EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEE
T ss_pred             EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEe
Confidence            344433345544445    899999987766554333   223455554  45578888876 56 8888776432 222


Q ss_pred             EEecc--CCceeEEEEEEEeCC-eEEEEc-CCCcEEEEee
Q psy17021        161 IFADD--TQPRWITTSCVLDYN-TVASAD-KFGNVCIVST  196 (199)
Q Consensus       161 ~varD--~~~~wvta~~~Ld~~-t~l~aD-~~gNl~vlr~  196 (199)
                      .....  .......++.+-.++ .+++++ ..+.+.++..
T Consensus       166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~  205 (331)
T 3u4y_A          166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET  205 (331)
T ss_dssp             EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence            11100  112234555554333 455555 4566777754

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=82.20  E-value=18  Score=29.18  Aligned_cols=98  Identities=8%  Similarity=0.076  Sum_probs=57.3

Q ss_pred             cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccc-cEEEEEEeCCCCeEEEEeccCCce
Q psy17021         94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQE-SVFLVRYKRYENQLLIFADDTQPR  169 (199)
Q Consensus        94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~-Sv~ll~y~~~~~~l~~varD~~~~  169 (199)
                      +|+|.++-  +++|..|+...+ ......   .+..+..+... ++.++|+|... +..+++|+...+++..++.-...+
T Consensus        42 ~g~lyv~d~~~~~I~~~d~~g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~  117 (306)
T 2p4o_A           42 DGTIFVTNHEVGEIVSITPDGN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAI  117 (306)
T ss_dssp             TSCEEEEETTTTEEEEECTTCC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCS
T ss_pred             CCCEEEEeCCCCeEEEECCCCc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCcc
Confidence            45555543  566766766543 222222   23356667654 34578898653 567888887778787776543334


Q ss_pred             eEEEEEEEeCCeEEEEcC-CCcEEEEe
Q psy17021        170 WITTSCVLDYNTVASADK-FGNVCIVS  195 (199)
Q Consensus       170 wvta~~~Ld~~t~l~aD~-~gNl~vlr  195 (199)
                      ........+...++++|. .++|+.+.
T Consensus       118 ~~~g~~~~~~~~~~v~d~~~g~i~~~d  144 (306)
T 2p4o_A          118 FLNGITPLSDTQYLTADSYRGAIWLID  144 (306)
T ss_dssp             CEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred             ccCcccccCCCcEEEEECCCCeEEEEe
Confidence            444444444456777885 67666653

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=81.64  E-value=16  Score=28.21  Aligned_cols=174  Identities=10%  Similarity=0.041  Sum_probs=84.3

Q ss_pred             Ccceeec-ccCCEEEEeec--CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCe-eeEEEe------
Q psy17021         11 EVPYAMC-PFQGALLVGVG--RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNA-MEFVHK------   80 (199)
Q Consensus        11 ~~~~~~~-~f~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdk-lesVh~------   80 (199)
                      ..|.+++ .-+|++.++..  +.+..||.. .+..+-....  ....+   ..+....++++++++. -..+..      
T Consensus        15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~--~~~~~---~~i~~~~~g~l~v~~~~~~~i~~~~~~g~   88 (299)
T 2z2n_A           15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPT--PDAKV---MCLTISSDGEVWFTENAANKIGRITKKGI   88 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSS--TTCCE---EEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred             CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCc--ccCce---eeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence            4677776 44789998874  679999976 3332211000  00122   2222223345544321 011111      


Q ss_pred             ---ec---cCCcceEEccc-cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEEe-CCEEEEEeccccEEEE
Q psy17021         81 ---TS---VDEVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESM-GHRIYVSDVQESVFLV  150 (199)
Q Consensus        81 ---~~---~kG~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~-~~~IlVGD~~~Sv~ll  150 (199)
                         ..   -...+.++..- +|+|.++.  ++.|..|+. ..+....... .....+..+... ++.+.+++...+ .+.
T Consensus        89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~-~i~  165 (299)
T 2z2n_A           89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP-NKGSYPSFITLGSDNALWFTENQNN-AIG  165 (299)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS-STTCCEEEEEECTTSCEEEEETTTT-EEE
T ss_pred             EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC-CCCCCCceEEEcCCCCEEEEeCCCC-EEE
Confidence               11   12245555443 47888776  568888887 3333222111 112346666664 347788886543 356


Q ss_pred             EEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcC-CCcEEEE
Q psy17021        151 RYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADK-FGNVCIV  194 (199)
Q Consensus       151 ~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~-~gNl~vl  194 (199)
                      +|++ .+++..+.-......+.++.+-.++.+.+++. .+.+..+
T Consensus       166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~  209 (299)
T 2z2n_A          166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRI  209 (299)
T ss_dssp             EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred             EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEE
Confidence            6776 55565543222233444544432334444443 3334433

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=81.14  E-value=26  Score=30.22  Aligned_cols=96  Identities=7%  Similarity=0.007  Sum_probs=56.6

Q ss_pred             CCcceEEc--cccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         84 DEVPYAMC--PFQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        84 kG~v~aL~--~f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      .++++++.  |-.+.++|  +..++|++|++...+..... .. ....+.++.-  .++++++|..-..|.++  +....
T Consensus       149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-~~-~~~~v~~v~wspdg~~lasgs~dg~v~iw--d~~~~  224 (434)
T 2oit_A          149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-LP-STVAVTSVCWSPKGKQLAVGKQNGTVVQY--LPTLQ  224 (434)
T ss_dssp             GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-EC-GGGCEEEEEECTTSSCEEEEETTSCEEEE--CTTCC
T ss_pred             CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-cC-CCCceeEEEEcCCCCEEEEEcCCCcEEEE--ccCCc
Confidence            45676654  33355554  34789999999766432211 11 1123555553  57899999977777765  43323


Q ss_pred             eEEEEeccC-----CceeEEEEEEEeCCeEE
Q psy17021        158 QLLIFADDT-----QPRWITTSCVLDYNTVA  183 (199)
Q Consensus       158 ~l~~varD~-----~~~wvta~~~Ld~~t~l  183 (199)
                      ....+....     .+..++++.+..+..++
T Consensus       225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l  255 (434)
T 2oit_A          225 EKKVIPCPPFYESDHPVRVLDVLWIGTYVFA  255 (434)
T ss_dssp             EEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred             ccccccCCcccCCCCceeEEEEEEecCceEE
Confidence            233332221     23589999998777666

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=81.01  E-value=18  Score=28.37  Aligned_cols=99  Identities=12%  Similarity=0.012  Sum_probs=53.7

Q ss_pred             eEEEEe--CCEEEEEEcC-Ccceeee---eeccCcC-ceEEEEEEe-CCEEEEEeccccEEEEEEeCCCCeE-EEEeccC
Q psy17021         96 ALLVGV--GRYLRLYDLG-KKKLLRK---CENKHLP-NLIVKIESM-GHRIYVSDVQESVFLVRYKRYENQL-LIFADDT  166 (199)
Q Consensus        96 ~LLaav--g~~v~vy~l~-~~~Ll~~---~~~~~~~-~~i~~l~~~-~~~IlVGD~~~Sv~ll~y~~~~~~l-~~varD~  166 (199)
                      .|.++-  ++.|.+|++. ..++...   ....... ..+..+... +..+.|++...+ .+.+|+++.+++ ..+.  .
T Consensus       189 ~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~-~i~~~d~~~g~~~~~~~--~  265 (314)
T 1pjx_A          189 QLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS-HIEVFGPDGGQPKMRIR--C  265 (314)
T ss_dssp             EEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT-EEEEECTTCBSCSEEEE--C
T ss_pred             EEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC-EEEEEcCCCCcEeEEEe--C
Confidence            455553  5789999875 3332211   1111111 346666653 346788876544 466778763333 3332  2


Q ss_pred             CceeEEEEEEEeC-Ce-EEEEcCCCcEEEEeec
Q psy17021        167 QPRWITTSCVLDY-NT-VASADKFGNVCIVSTY  197 (199)
Q Consensus       167 ~~~wvta~~~Ld~-~t-~l~aD~~gNl~vlr~~  197 (199)
                      ...+++++.+-.+ ++ ++++...+.|+.+...
T Consensus       266 ~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~  298 (314)
T 1pjx_A          266 PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence            2367888888322 22 4455556788887654

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=80.82  E-value=19  Score=28.48  Aligned_cols=161  Identities=12%  Similarity=0.056  Sum_probs=77.8

Q ss_pred             cCCEEEEee-cCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEECCee----------eEEEeeccCC-c
Q psy17021         19 FQGALLVGV-GRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVGNAM----------EFVHKTSVDE-V   86 (199)
Q Consensus        19 f~~~ll~~~-~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vgdkl----------esVh~~~~kG-~   86 (199)
                      .+|++.+|. ++.|..||.. .+.+.+....    ..+  +.......++++++|..-          +.+......+ .
T Consensus       106 ~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~----~~~--~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~  178 (330)
T 3hxj_A          106 FEDILYVTSMDGHLYAINTD-GTEKWRFKTK----KAI--YATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAI  178 (330)
T ss_dssp             ETTEEEEECTTSEEEEECTT-SCEEEEEECS----SCC--CSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCC
T ss_pred             ECCEEEEEecCCEEEEEcCC-CCEEEEEcCC----Cce--eeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCc
Confidence            399999998 5779999976 3333222211    111  111222224556554321          1222222222 2


Q ss_pred             ceEEcc-ccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCC-EEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021         87 PYAMCP-FQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGH-RIYVSDVQESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus        87 v~aL~~-f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~-~IlVGD~~~Sv~ll~y~~~~~~l~~var  164 (199)
                      +.++.. -+|.|.+|. ..|..|+ .+.+.+-.....  ...+.++...++ .|.+|..-.++  ..|++....+.....
T Consensus       179 ~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~--~~~~~~~~~~~~g~l~v~t~~~gl--~~~~~~g~~~~~~~~  252 (330)
T 3hxj_A          179 TSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAG--YWTVTRPAISEDGTIYVTSLDGHL--YAINPDGTEKWRFKT  252 (330)
T ss_dssp             CSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCS--SCCCSCCEECTTSCEEEEETTTEE--EEECTTSCEEEEEEC
T ss_pred             eeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccC--CcceeceEECCCCeEEEEcCCCeE--EEECCCCCEeEEeeC
Confidence            333333 267888888 8888888 433332222221  122444444433 78888765554  444665555554443


Q ss_pred             cCCceeEEEEEEEe-CCeEEEEcCCCcEEEEe
Q psy17021        165 DTQPRWITTSCVLD-YNTVASADKFGNVCIVS  195 (199)
Q Consensus       165 D~~~~wvta~~~Ld-~~t~l~aD~~gNl~vlr  195 (199)
                      +...  ..+ -.+| ++.+.++...|.|+.+.
T Consensus       253 ~~~~--~~~-~~~~~~g~l~v~t~~ggl~~~d  281 (330)
T 3hxj_A          253 GKRI--ESS-PVIGNTDTIYFGSYDGHLYAIN  281 (330)
T ss_dssp             SSCC--CSC-CEECTTSCEEEECTTCEEEEEC
T ss_pred             CCCc--ccc-ceEcCCCeEEEecCCCCEEEEC
Confidence            2211  111 2224 44555555566666553

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=80.47  E-value=21  Score=28.78  Aligned_cols=97  Identities=14%  Similarity=0.043  Sum_probs=48.6

Q ss_pred             CeEEEE--eCCEEEEEEcCCcceeeeeeccCcCceEEEEE--EeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCcee
Q psy17021         95 GALLVG--VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRW  170 (199)
Q Consensus        95 g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~w  170 (199)
                      |+++++  -++.|.+|+....+++-+..... ...+.++.  ..|++++ .+ ...  +..|+++...+-.+.-. ....
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilv-s~-~~~--V~~~d~~G~~~W~~~~~-~~~~   78 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILF-SY-SKG--AKMITRDGRELWNIAAP-AGCE   78 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEE-EC-BSE--EEEECTTSCEEEEEECC-TTCE
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEE-eC-CCC--EEEECCCCCEEEEEcCC-CCcc
Confidence            555555  36778888885555544333221 01223333  3455444 32 233  56677754444444432 2235


Q ss_pred             EEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        171 ITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       171 vta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      +.++.++.+..++++|...|-.++.++
T Consensus        79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd  105 (276)
T 3no2_A           79 MQTARILPDGNALVAWCGHPSTILEVN  105 (276)
T ss_dssp             EEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred             ccccEECCCCCEEEEecCCCCEEEEEe
Confidence            667777766666666554343444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	199
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	97.73
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	97.6
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	97.29
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	97.23
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	97.21
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	97.14
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	96.88
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	96.8
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	96.6
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	96.48
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	96.37
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.28
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	96.03
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	95.99
d1tbga_	340	beta1-subunit of the signal-transducing G protein	95.78
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	95.71
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	95.71
d1tbga_	340	beta1-subunit of the signal-transducing G protein	95.39
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	94.49
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	94.36
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	94.14
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	93.75
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	92.15
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	92.02
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	91.79
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	91.74
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	88.24
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	87.15
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	85.94
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	85.64
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	83.95
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	83.29
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	82.36

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.73  E-value=0.0043  Score=47.78  Aligned_cols=177  Identities=13%  Similarity=0.068  Sum_probs=99.5

Q ss_pred             ccCCEEEEeecCeeEEEecchhhhhhhhhhcc--c-ccCceeeeeEEEEEcCceeEE----CCeeeEEEeeccCCcceEE
Q psy17021         18 PFQGALLVGVGRYLRLYDLGKKKLLRKCENKV--R-IKGFRKAHQTHTHSGRSDRLV----GNAMEFVHKTSVDEVPYAM   90 (199)
Q Consensus        18 ~f~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~--~-~~~~~~~~~~~~~~~~~ri~v----gdklesVh~~~~kG~v~aL   90 (199)
                      +-...+.++..+.+++|+.++..-+.......  . .|.. . .+..- ..++.+.+    +.+...+.....+++++++
T Consensus       109 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~-~-~l~~g-~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~  185 (299)
T d1nr0a2         109 ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK-Q-FVAVG-GQDSKVHVYKLSGASVSEVKTIVHPAEITSV  185 (299)
T ss_dssp             TTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS-C-EEEEE-ETTSEEEEEEEETTEEEEEEEEECSSCEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc-c-ccccc-ccccccccccccccccccccccccccccccc
Confidence            43445667777999999987643221111100  0 0100 0 01110 11122221    2333444445567788887


Q ss_pred             ccc-cCe-EEEEe-CCEEEEEEcCCcceee-eeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021         91 CPF-QGA-LLVGV-GRYLRLYDLGKKKLLR-KCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus        91 ~~f-~g~-LLaav-g~~v~vy~l~~~~Ll~-~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var  164 (199)
                      ..- ++. |+++- +.++++|++...+... ......-...+.++..  .+++++.|..-.++.++..+...........
T Consensus       186 ~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~  265 (299)
T d1nr0a2         186 AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG  265 (299)
T ss_dssp             EECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEec
Confidence            533 344 44443 5789999997554322 2222211234677664  5679999998888888766543333333334


Q ss_pred             cCCceeEEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        165 DTQPRWITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       165 D~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      ......++++.+.|++.++.+-.+++|.+..+|
T Consensus       266 ~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         266 AHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             SSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             CCCCCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence            444556777778888899988899999998876

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.60  E-value=0.0021  Score=49.49  Aligned_cols=123  Identities=14%  Similarity=0.091  Sum_probs=80.0

Q ss_pred             CCeeeEEEeeccCCcceEEccccCeEEEEeC--CEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccE
Q psy17021         72 GNAMEFVHKTSVDEVPYAMCPFQGALLVGVG--RYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESV  147 (199)
Q Consensus        72 gdklesVh~~~~kG~v~aL~~f~g~LLaavg--~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv  147 (199)
                      ....+.+.....+.++.++.+-.+.++++..  +.+++|++.+.+........ ....+.++..  .++++++|+.-..+
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~g~~dg~i  186 (287)
T d1pgua2         108 SFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP-LRAKPSYISISPSETYIAAGDVMGKI  186 (287)
T ss_dssp             TTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC-CSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeec-cCCceeEEEeccCccccccccccccc
Confidence            4445567777888888888887777777764  57999999765543322221 1223566654  47799999999998


Q ss_pred             EEEEEeCCCCeEEEEeccCCceeEEEEEE-----------EeCCeEEEEcCCCcEEEEeec
Q psy17021        148 FLVRYKRYENQLLIFADDTQPRWITTSCV-----------LDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       148 ~ll~y~~~~~~l~~varD~~~~wvta~~~-----------Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                      .++..  ..++...---......++++.+           .|.+.++.+..++++.++.+.
T Consensus       187 ~i~d~--~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~  245 (287)
T d1pgua2         187 LLYDL--QSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK  245 (287)
T ss_dssp             EEEET--TTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred             cceee--cccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECC
Confidence            88654  3444332222334456777664           244567788899999988653

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.026  Score=44.53  Aligned_cols=108  Identities=12%  Similarity=0.026  Sum_probs=70.5

Q ss_pred             cCCcceEEc--cccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMC--PFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~--~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..+++++++  +-...+++| ..+++++|++...+.++.-...   ..+.++..  .++++++|..-..+.++..+  ..
T Consensus       182 ~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~---~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~--~~  256 (337)
T d1gxra_         182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVN--KP  256 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETT--SS
T ss_pred             cccccccccccccccccccccccccccccccccceeecccccc---cceEEEEEcccccccceecccccccccccc--cc
Confidence            456777764  333345444 4689999999877655543332   34666654  57799999988888877653  33


Q ss_pred             eEEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        158 QLLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ....  .......++++.+- |.+.++.+..++.|.++..+
T Consensus       257 ~~~~--~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~  295 (337)
T d1gxra_         257 DKYQ--LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             CEEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             cccc--ccccccccceEEECCCCCEEEEEeCCCeEEEEECC
Confidence            3322  23345578888886 44578888888988888654

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.029  Score=44.26  Aligned_cols=168  Identities=8%  Similarity=0.091  Sum_probs=99.2

Q ss_pred             ecccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEE-EEcCceeEEC-----------CeeeEEEeec
Q psy17021         16 MCPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT-HSGRSDRLVG-----------NAMEFVHKTS   82 (199)
Q Consensus        16 ~~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~-~~~~~ri~vg-----------dklesVh~~~   82 (199)
                      +.+-...++.|.. +.+++||+...++.+......   ..+   ..+. ...+.+++.|           ...+.++...
T Consensus       149 ~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~---~~v---~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~  222 (337)
T d1gxra_         149 ISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT---DGA---SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD  222 (337)
T ss_dssp             ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS---SCE---EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccc---ccc---ccccccccccccccccccccccccccccceeecccc
Confidence            3343445554444 679999998877766543321   212   1111 1122333332           2335566777


Q ss_pred             cCCcceEEccc-cC-eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCC
Q psy17021         83 VDEVPYAMCPF-QG-ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYEN  157 (199)
Q Consensus        83 ~kG~v~aL~~f-~g-~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~  157 (199)
                      ..++++++.-- ++ .+++| -++.+++|++...+........   ..+.++.-  .+++++.|..-..+.++.  ...+
T Consensus       223 ~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~i~~v~~s~~g~~l~s~s~Dg~i~iwd--~~~~  297 (337)
T d1gxra_         223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLLNAWR--TPYG  297 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS---SCEEEEEECTTSSEEEEEETTSEEEEEE--TTTC
T ss_pred             cccceEEEEEcccccccceeccccccccccccccccccccccc---cccceEEECCCCCEEEEEeCCCeEEEEE--CCCC
Confidence            88888886532 34 44443 4688999999877654433222   34666664  467888888767777664  3444


Q ss_pred             eEEEEeccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEee
Q psy17021        158 QLLIFADDTQPRWITTSCVLDY-NTVASADKFGNVCIVST  196 (199)
Q Consensus       158 ~l~~varD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~  196 (199)
                      +......+  ..+++++++-.+ ..++.+-.+|.|.++.+
T Consensus       298 ~~~~~~~~--~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         298 ASIFQSKE--SSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             CEEEEEEC--SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CEEEEccC--CCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            44333333  357888888744 45677788899988865

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.026  Score=42.94  Aligned_cols=165  Identities=12%  Similarity=0.070  Sum_probs=95.9

Q ss_pred             CCEEEEeecCeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEEC------------CeeeEEE--eeccCC
Q psy17021         20 QGALLVGVGRYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVG------------NAMEFVH--KTSVDE   85 (199)
Q Consensus        20 ~~~ll~~~~~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vg------------dklesVh--~~~~kG   85 (199)
                      .-.++++..+.+.+|+....+.++.....  .+.      ......++++++|            ...+...  ....++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~  163 (287)
T d1pgua2          92 GFTAVLTNDDDLLILQSFTGDIIKSVRLN--SPG------SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA  163 (287)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEECS--SCE------EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS
T ss_pred             CceEEEeecccceeeeccceeeeeecccc--cee------eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCC
Confidence            33456666788999998887776654332  111      1112222333321            1111111  223567


Q ss_pred             cceEEccc-cC-eEEEEe-CCEEEEEEcCCcceeeeeeccCcC-ceEEEEEE------------eCCEEEEEeccccEEE
Q psy17021         86 VPYAMCPF-QG-ALLVGV-GRYLRLYDLGKKKLLRKCENKHLP-NLIVKIES------------MGHRIYVSDVQESVFL  149 (199)
Q Consensus        86 ~v~aL~~f-~g-~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~-~~i~~l~~------------~~~~IlVGD~~~Sv~l  149 (199)
                      ++++++-- +| +|++|- .+++++|++...+.... .+. .+ ..+.++.-            .+++++.|..-.++.+
T Consensus       164 ~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~i  241 (287)
T d1pgua2         164 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS-RWA-FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI  241 (287)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC-CSC-CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred             ceeEEEeccCccccccccccccccceeecccccccc-ccc-ccccccceeeecccccccccccCCCCeeEeecCCCeEEE
Confidence            77766422 34 455554 67999999987653221 111 11 23556542            2468888888788888


Q ss_pred             EEEeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        150 VRYKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       150 l~y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      +..+.....+..  ..-.+..|+++.+.++++++.+-.++.+.+..+
T Consensus       242 w~~~~~~~~~~~--~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         242 YSVKRPMKIIKA--LNAHKDGVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             EESSCTTCCEEE--TTSSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             EECCCCCeEEEE--eCCCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence            765433333332  234556799999999889999989999988764

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.14  E-value=0.014  Score=44.69  Aligned_cols=109  Identities=12%  Similarity=0.015  Sum_probs=66.1

Q ss_pred             cceEEccccCeEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021         86 VPYAMCPFQGALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        86 ~v~aL~~f~g~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v  162 (199)
                      .+.++.|=...+++| -.+.+++|++...++....... .+..+.++..  .++++++|+.-..+.++.... ...+...
T Consensus       140 ~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~-~~~~~~~  217 (299)
T d1nr0a2         140 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN-NFELAHT  217 (299)
T ss_dssp             EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG-TTEESCC
T ss_pred             cccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc-ccccccc
Confidence            333444433344443 4689999999776654432222 1234666665  467999999988887775432 1222221


Q ss_pred             e-ccCCceeEEEEEEEeC-CeEEEEcCCCcEEEEee
Q psy17021        163 A-DDTQPRWITTSCVLDY-NTVASADKFGNVCIVST  196 (199)
Q Consensus       163 a-rD~~~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~  196 (199)
                      . -.....+++++++-.+ ..++.+..++.+.++.+
T Consensus       218 ~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~  253 (299)
T d1nr0a2         218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM  253 (299)
T ss_dssp             CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             ccccccccccccccccccccceEEEcCCCEEEEEEC
Confidence            1 1234568899888644 46777788899998864

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.88  E-value=0.054  Score=41.06  Aligned_cols=166  Identities=11%  Similarity=0.048  Sum_probs=83.8

Q ss_pred             ccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEE-EEcCceeEEC-----------CeeeEEE-eecc
Q psy17021         18 PFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHT-HSGRSDRLVG-----------NAMEFVH-KTSV   83 (199)
Q Consensus        18 ~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~-~~~~~ri~vg-----------dklesVh-~~~~   83 (199)
                      +....++.|.. +.+++||+...+.++......   ..   +.... ...+..++++           +..+.+. ....
T Consensus       169 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h  242 (355)
T d1nexb2         169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT---DR---IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH  242 (355)
T ss_dssp             EETTEEEEEETTSCEEEEETTTTEEEEEECCCS---SC---EEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred             cccceeeeecccceeeeeecccccceeeeeccc---cc---cccccccccceeeecccccceEEeeeccccccccccccc
Confidence            33445555555 679999987766554332221   11   11111 1112222221           1122222 2234


Q ss_pred             CCcceEEccccCe-EEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEE
Q psy17021         84 DEVPYAMCPFQGA-LLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLI  161 (199)
Q Consensus        84 kG~v~aL~~f~g~-LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~  161 (199)
                      .++++++. +.++ |+.|- .++|++|++.+.+........ ....+......+.+++.|. -.+|.+  |+-+.+++..
T Consensus       243 ~~~v~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~-d~~i~v--wd~~tg~~~~  317 (355)
T d1nexb2         243 TALVGLLR-LSDKFLVSAAADGSIRGWDANDYSRKFSYHHT-NLSAITTFYVSDNILVSGS-ENQFNI--YNLRSGKLVH  317 (355)
T ss_dssp             SSCCCEEE-ECSSEEEEECTTSEEEEEETTTCCEEEEEECT-TCCCCCEEEECSSEEEEEE-TTEEEE--EETTTCCBCC
T ss_pred             cccccccc-cccceeeeeecccccccccccccceecccccC-CceEEEEEcCCCCEEEEEe-CCEEEE--EECCCCCEEE
Confidence            56777765 4555 44333 578999999765432222221 1222444455567777775 345555  5555555542


Q ss_pred             EeccCCceeEEEEEEEeCCe-EEEEcCCCcEEEEe
Q psy17021        162 FADDTQPRWITTSCVLDYNT-VASADKFGNVCIVS  195 (199)
Q Consensus       162 varD~~~~wvta~~~Ld~~t-~l~aD~~gNl~vlr  195 (199)
                      ..-....-.|+++.+ +++. ++++..+|.+++--
T Consensus       318 ~~~~~~~~~V~~v~~-~~~~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         318 ANILKDADQIWSVNF-KGKTLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             SCTTTTCSEEEEEEE-ETTEEEEEEESSSCEEEEE
T ss_pred             EEecCCCCCEEEEEE-cCCeEEEEEECCCcEEEEE
Confidence            111223446778877 4555 45568889876643

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.80  E-value=0.085  Score=42.15  Aligned_cols=112  Identities=7%  Similarity=-0.048  Sum_probs=72.0

Q ss_pred             CCcceEEcc-ccCeEEE--EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe
Q psy17021         84 DEVPYAMCP-FQGALLV--GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ  158 (199)
Q Consensus        84 kG~v~aL~~-f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~  158 (199)
                      +++|+++.- -+|..|+  +...++++|++...+.............+.++.-  .++++++|..-..+.+..++.....
T Consensus        51 ~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~  130 (371)
T d1k8kc_          51 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW  130 (371)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEeecccccccccccccccccccccccccccccceeecccCcceeeeeeccccc
Confidence            456666541 1344443  3457999999976654433333212234666664  5789999999999999999876654


Q ss_pred             EEE-EeccCCceeEEEEEEEeCC-eEEEEcCCCcEEEEe
Q psy17021        159 LLI-FADDTQPRWITTSCVLDYN-TVASADKFGNVCIVS  195 (199)
Q Consensus       159 l~~-varD~~~~wvta~~~Ld~~-t~l~aD~~gNl~vlr  195 (199)
                      ... .-......+++++.+-.++ .++.+..++.+.++.
T Consensus       131 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~  169 (371)
T d1k8kc_         131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS  169 (371)
T ss_dssp             EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccccccccccccccccccccccccceeccccCcEEEEEe
Confidence            332 2234455688998886444 566788888887764

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.60  E-value=0.098  Score=41.16  Aligned_cols=109  Identities=12%  Similarity=0.085  Sum_probs=65.5

Q ss_pred             CcceEEc--cccCeEEE-E-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe
Q psy17021         85 EVPYAMC--PFQGALLV-G-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ  158 (199)
Q Consensus        85 G~v~aL~--~f~g~LLa-a-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~  158 (199)
                      +.+++++  |-...+++ | -.++|++|++...+....-..  ....+.++..  .++++++|..-..+.++.... ...
T Consensus       147 ~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~--~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~-~~~  223 (311)
T d1nr0a1         147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE--HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTK  223 (311)
T ss_dssp             SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCE
T ss_pred             cccccccccccceeeeccccccccccccccccccccccccc--ccccccccccCcccccccccccccccccccccc-ccc
Confidence            5566653  22233444 3 357899999987664333221  1223666665  578999998888887765432 223


Q ss_pred             EEEEeccC-----CceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        159 LLIFADDT-----QPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       159 l~~varD~-----~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      ...+..+.     ...+++++.+= |.+.++.+..+|.+.++.+
T Consensus       224 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~  267 (311)
T d1nr0a1         224 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV  267 (311)
T ss_dssp             EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEEC
Confidence            33333222     24578998886 4456777778888888753

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.11  Score=39.11  Aligned_cols=174  Identities=9%  Similarity=0.066  Sum_probs=96.8

Q ss_pred             cccCCEEEEeec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEEC-----------CeeeEEEee-cc
Q psy17021         17 CPFQGALLVGVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVG-----------NAMEFVHKT-SV   83 (199)
Q Consensus        17 ~~f~~~ll~~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vg-----------dklesVh~~-~~   83 (199)
                      ......+++|.. +.+++||+...+.+..-...  . .    ........+..++.|           +..+.++.. ..
T Consensus       144 ~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~--~-~----~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~  216 (342)
T d2ovrb2         144 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH--T-N----RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH  216 (342)
T ss_dssp             EECSSCEEEEETTSCEEEEEGGGTEEEEEECCC--S-S----CEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred             ccccceeeeecCCCeEEEeecccceeeEEEcCc--c-c----ccccccCCCCEEEEEeCCCeEEEeecccceeeeEeccc
Confidence            344445555555 88999998776655432221  0 1    112222233444332           112223322 33


Q ss_pred             CCcceEEccccCeEEEEe-CCEEEEEEcCCcceeeeee-ccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCe-EE
Q psy17021         84 DEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCE-NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQ-LL  160 (199)
Q Consensus        84 kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~-~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~-l~  160 (199)
                      ++.+.++.+-.+.|++|- .+++++|+....+...... .......+..+...+++++.|.--.+|.+...  +.++ +.
T Consensus       217 ~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~--~tg~~i~  294 (342)
T d2ovrb2         217 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL--KTGEFIR  294 (342)
T ss_dssp             CSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEET--TTCCEEE
T ss_pred             ccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEEEC--CCCCEEE
Confidence            556677665444555443 5789999997665333222 11122347778888999999987777777654  3333 33


Q ss_pred             EEec---cCCceeEEEEEEEeCCe-EEEEcCCCc----EEEEeecCC
Q psy17021        161 IFAD---DTQPRWITTSCVLDYNT-VASADKFGN----VCIVSTYRE  199 (199)
Q Consensus       161 ~var---D~~~~wvta~~~Ld~~t-~l~aD~~gN----l~vlr~~~~  199 (199)
                      .+..   +.....|+++.+-++.. +..+..+|.    |+++-.+.|
T Consensus       295 ~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~~  341 (342)
T d2ovrb2         295 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  341 (342)
T ss_dssp             EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCCC
Confidence            4433   22345688888875554 556677775    777766543

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.12  Score=38.71  Aligned_cols=104  Identities=13%  Similarity=0.147  Sum_probs=68.2

Q ss_pred             EccccCe-EEE-EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCC
Q psy17021         90 MCPFQGA-LLV-GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQ  167 (199)
Q Consensus        90 L~~f~g~-LLa-avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~  167 (199)
                      ..++++. +++ +..++|++|++...+.+.....  -...+..+...+++++.|..-.++.+......+......+-...
T Consensus       182 ~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~  259 (342)
T d2ovrb2         182 SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH  259 (342)
T ss_dssp             EEEECSSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC
T ss_pred             cccCCCCEEEEEeCCCeEEEeecccceeeeEecc--cccceeEEecCCCEEEEEcCCCEEEEEeccccccccccccccee
Confidence            3445664 443 3468999999987776544322  23457788888999999999888888765433222222222333


Q ss_pred             ceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        168 PRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       168 ~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ..++.++.+ +.+.++.+..+|.|.++.+
T Consensus       260 ~~~~~~~~~-~~~~~~s~s~Dg~i~iwd~  287 (342)
T d2ovrb2         260 QSAVTCLQF-NKNFVITSSDDGTVKLWDL  287 (342)
T ss_dssp             SSCEEEEEE-CSSEEEEEETTSEEEEEET
T ss_pred             eeceeeccc-CCCeeEEEcCCCEEEEEEC
Confidence            455666554 6778888889999988764

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.28  E-value=0.17  Score=39.51  Aligned_cols=110  Identities=14%  Similarity=0.112  Sum_probs=65.1

Q ss_pred             cCCcceEEccccC--eEEEE-eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE---eCCEEEEEeccccEEEEEEeCCC
Q psy17021         83 VDEVPYAMCPFQG--ALLVG-VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES---MGHRIYVSDVQESVFLVRYKRYE  156 (199)
Q Consensus        83 ~kG~v~aL~~f~g--~LLaa-vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~---~~~~IlVGD~~~Sv~ll~y~~~~  156 (199)
                      ..++++++....+  .++.| -...+++|+.............   .....+..   .++++++|..-..+.+...+.. 
T Consensus       162 h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~-  237 (388)
T d1erja_         162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG-  237 (388)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEETTTC-
T ss_pred             ccccccccccccccccccccccceeeeeeeccccccccccccc---cccccccccCCCCCeEEEEcCCCeEEEeecccC-
Confidence            3566776654433  44444 4678999999876654443332   22333332   3578888887777776654321 


Q ss_pred             CeEEEEecc-----CCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        157 NQLLIFADD-----TQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       157 ~~l~~varD-----~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      .....+...     ....+++++.+- |...++.+..++++.++.+
T Consensus       238 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~  283 (388)
T d1erja_         238 FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL  283 (388)
T ss_dssp             CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             ccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEec
Confidence            222222111     124578888887 4457888889999988764

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.03  E-value=0.11  Score=40.43  Aligned_cols=103  Identities=11%  Similarity=0.158  Sum_probs=70.2

Q ss_pred             cCeEEEEe--CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCce
Q psy17021         94 QGALLVGV--GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPR  169 (199)
Q Consensus        94 ~g~LLaav--g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~  169 (199)
                      +|.++++-  ++.|.+|+...+.+..... .....++..|.+  .|+ |+|+|-...-.+..|+++..-+..++.+....
T Consensus       167 ~g~i~v~d~~~~~V~~~d~~G~~~~~~g~-~g~~~~P~giavD~~G~-i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~  244 (279)
T d1q7fa_         167 KQEIFISDNRAHCVKVFNYEGQYLRQIGG-EGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQLISALESKVKHA  244 (279)
T ss_dssp             SSEEEEEEGGGTEEEEEETTCCEEEEESC-TTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSCEEEEEEESSCCS
T ss_pred             ceeEEeeeccccceeeeecCCceeeeecc-cccccCCcccccccCCe-EEEEECCCCcEEEEECCCCCEEEEEeCCCCCC
Confidence            35666554  4678888876654433222 222334677765  354 88999877655778887666566777777666


Q ss_pred             eEEEEEEEeCCeEEEEcCCCcEEEEeecC
Q psy17021        170 WITTSCVLDYNTVASADKFGNVCIVSTYR  198 (199)
Q Consensus       170 wvta~~~Ld~~t~l~aD~~gNl~vlr~~~  198 (199)
                      +.+++++-.+..++++|....+.+||+.+
T Consensus       245 ~p~~vav~~dG~l~V~~~n~~v~~fr~~~  273 (279)
T d1q7fa_         245 QCFDVALMDDGSVVLASKDYRLYIYRYVQ  273 (279)
T ss_dssp             CEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred             CEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence            78888776666899999988899998753

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.99  E-value=0.094  Score=38.82  Aligned_cols=98  Identities=12%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             cccCeEE-E-EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCC
Q psy17021         92 PFQGALL-V-GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQ  167 (199)
Q Consensus        92 ~f~g~LL-a-avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~  167 (199)
                      ...+.++ + +..+.+++|++...+++..-..  ....+.++..  .+++++.|..-.+|.++.++. ...+..+..  .
T Consensus       214 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~--h  288 (317)
T d1vyhc1         214 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN-KRCMKTLNA--H  288 (317)
T ss_dssp             ---CCEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTT-SCCCEEEEC--C
T ss_pred             ccCCceeEeccCCCEEEEEECCCCcEEEEEeC--CCCCEEEEEECCCCCEEEEEECCCeEEEEECCC-CcEEEEEcC--C
Confidence            3344433 3 3468899999988775543222  2234666664  467888998877887776543 222333332  2


Q ss_pred             ceeEEEEEEE-eCCeEEEEcCCCcEEEE
Q psy17021        168 PRWITTSCVL-DYNTVASADKFGNVCIV  194 (199)
Q Consensus       168 ~~wvta~~~L-d~~t~l~aD~~gNl~vl  194 (199)
                      ...|+++.+- |...++.+..+|.|.+.
T Consensus       289 ~~~V~~~~~s~~~~~l~s~s~Dg~i~iW  316 (317)
T d1vyhc1         289 EHFVTSLDFHKTAPYVVTGSVDQTVKVW  316 (317)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred             CCCEEEEEEcCCCCEEEEEeCCCeEEEe
Confidence            3568888886 44578888899998775

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.78  E-value=0.25  Score=37.15  Aligned_cols=99  Identities=12%  Similarity=0.093  Sum_probs=67.0

Q ss_pred             eEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEE
Q psy17021         96 ALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWIT  172 (199)
Q Consensus        96 ~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvt  172 (199)
                      .+++|- ...+++|++.+.+.+..-..  ....|.++..  .++++++|..-..+.+..++. ...+...........++
T Consensus       198 ~~~~~~~d~~v~i~d~~~~~~~~~~~~--h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~-~~~~~~~~~~~~~~~i~  274 (340)
T d1tbga_         198 LFVSGACDASAKLWDVREGMCRQTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSHDNIICGIT  274 (340)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEE
T ss_pred             eeEEeecCceEEEEECCCCcEEEEEeC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc-cccccccccccccCceE
Confidence            344443 68899999987765443221  1234666664  477999998888888776532 33455566667777788


Q ss_pred             EEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021        173 TSCVLDY-NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       173 a~~~Ld~-~t~l~aD~~gNl~vlr~~  197 (199)
                      ++.+-.+ ..++.+..+|++.++.+.
T Consensus       275 ~~~~s~~~~~l~~g~~dg~i~iwd~~  300 (340)
T d1tbga_         275 SVSFSKSGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             EEEECSSSCEEEEEETTSCEEEEETT
T ss_pred             EEEECCCCCEEEEEECCCEEEEEECC
Confidence            8888744 467888889999988643

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.71  E-value=0.27  Score=36.92  Aligned_cols=98  Identities=10%  Similarity=0.068  Sum_probs=59.3

Q ss_pred             CeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEE
Q psy17021         95 GALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITT  173 (199)
Q Consensus        95 g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta  173 (199)
                      ..++.+. ...+++|++...+.+..................++++++|..-.++.+...  ..+.....-+. ....+++
T Consensus       172 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~--~~~~~~~~~~~-h~~~v~~  248 (355)
T d1nexb2         172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL--ENGELMYTLQG-HTALVGL  248 (355)
T ss_dssp             TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET--TTCCEEEEECC-CSSCCCE
T ss_pred             ceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeec--ccccccccccc-ccccccc
Confidence            3444443 578999999776644433322122233334446789999988888877654  33333332222 2345566


Q ss_pred             EEEEeCCeEEEEcCCCcEEEEee
Q psy17021        174 SCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       174 ~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      +.+ +++.++.+..+|.+.++..
T Consensus       249 ~~~-~~~~l~~~~~dg~i~iwd~  270 (355)
T d1nexb2         249 LRL-SDKFLVSAAADGSIRGWDA  270 (355)
T ss_dssp             EEE-CSSEEEEECTTSEEEEEET
T ss_pred             ccc-ccceeeeeecccccccccc
Confidence            654 7778888999999888754

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.71  E-value=0.35  Score=38.27  Aligned_cols=111  Identities=10%  Similarity=-0.012  Sum_probs=71.0

Q ss_pred             CcceEEccc-cCeEE-EEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeE
Q psy17021         85 EVPYAMCPF-QGALL-VGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQL  159 (199)
Q Consensus        85 G~v~aL~~f-~g~LL-aav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l  159 (199)
                      .|++|++-= +|++| +|- +..|++|++...++......+.-...|.++.-  .+++|+.|..-..+.++..+.  +..
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~--~~~   85 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG--RTW   85 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET--TEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc--ccc
Confidence            556665421 45554 343 46899999976654443333311124677764  478999998878888877653  333


Q ss_pred             EEE-eccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        160 LIF-ADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       160 ~~v-arD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                      ... ........++++++- |.+.++.+..++.+.++..+
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~  125 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE  125 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeee
Confidence            322 233445678899887 55578888889998887654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.39  E-value=0.36  Score=36.24  Aligned_cols=91  Identities=13%  Similarity=0.010  Sum_probs=58.7

Q ss_pred             eCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEEEEEEEe
Q psy17021        101 VGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWITTSCVLD  178 (199)
Q Consensus       101 vg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvta~~~Ld  178 (199)
                      -...+++|++...+.............+.++..  .++++++|.--.+|.++..  ..++....-+. ...+|+++.+-.
T Consensus       246 ~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~--~~~~~~~~~~~-H~~~V~~l~~s~  322 (340)
T d1tbga_         246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA--LKADRAGVLAG-HDNRVSCLGVTD  322 (340)
T ss_dssp             TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEET--TTCCEEEEECC-CSSCEEEEEECT
T ss_pred             CCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEEC--CCCcEEEEEcC-CCCCEEEEEEeC
Confidence            357899999987665444333323334666664  4679999998888877643  34433333232 245788998874


Q ss_pred             C-CeEEEEcCCCcEEEE
Q psy17021        179 Y-NTVASADKFGNVCIV  194 (199)
Q Consensus       179 ~-~t~l~aD~~gNl~vl  194 (199)
                      + ..++.+..+|+|.+.
T Consensus       323 d~~~l~s~s~Dg~v~iW  339 (340)
T d1tbga_         323 DGMAVATGSWDSFLKIW  339 (340)
T ss_dssp             TSSCEEEEETTSCEEEE
T ss_pred             CCCEEEEEccCCEEEEe
Confidence            4 467778888998764

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.49  E-value=0.57  Score=34.55  Aligned_cols=56  Identities=13%  Similarity=0.219  Sum_probs=34.9

Q ss_pred             EEccccCeEEEEe-CCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccc
Q psy17021         89 AMCPFQGALLVGV-GRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQE  145 (199)
Q Consensus        89 aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~  145 (199)
                      ++.|-.+.|+.|- ..+|++|++..++.++.-... .+..++++...++++++|---.
T Consensus       258 ~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd  314 (342)
T d1yfqa_         258 EFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDD  314 (342)
T ss_dssp             EECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECT
T ss_pred             EecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCC
Confidence            3445444555443 478999999887765533222 2345788888888887764333

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.36  E-value=0.82  Score=35.39  Aligned_cols=104  Identities=12%  Similarity=0.118  Sum_probs=61.2

Q ss_pred             ccccCeEEE--EeCCEEEEEEcCCcceeeeeeccCc--CceEEEEEE-eCCEEEEEeccccEEEEEEeCCCCeEE-EEec
Q psy17021         91 CPFQGALLV--GVGRYLRLYDLGKKKLLRKCENKHL--PNLIVKIES-MGHRIYVSDVQESVFLVRYKRYENQLL-IFAD  164 (199)
Q Consensus        91 ~~f~g~LLa--avg~~v~vy~l~~~~Ll~~~~~~~~--~~~i~~l~~-~~~~IlVGD~~~Sv~ll~y~~~~~~l~-~var  164 (199)
                      .|-.+.+++  +-.++|++|+....+.++.......  ...+.++.- .+.+++.|..-.++.++  +.+.++.. .+.-
T Consensus       214 ~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iw--d~~~~~~~~~~~~  291 (325)
T d1pgua1         214 SPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW--DVTTSKCVQKWTL  291 (325)
T ss_dssp             CSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEE--ETTTTEEEEEEEC
T ss_pred             ccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEE--ECCCCCEEEEEEe
Confidence            443455554  3468899999987765544321111  122444443 36688898877787775  44455543 3333


Q ss_pred             cCCcee--EEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        165 DTQPRW--ITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       165 D~~~~w--vta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ......  ..++..=.+..++.+..+|.|.++.+
T Consensus       292 ~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             CTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             cCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            444433  34444445567888888999988753

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.14  E-value=0.73  Score=33.92  Aligned_cols=98  Identities=14%  Similarity=0.127  Sum_probs=53.1

Q ss_pred             EEeCCEEEEEEcCCcc----eeeeee--ccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEEeccCCceeEE
Q psy17021         99 VGVGRYLRLYDLGKKK----LLRKCE--NKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIFADDTQPRWIT  172 (199)
Q Consensus        99 aavg~~v~vy~l~~~~----Ll~~~~--~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~varD~~~~wvt  172 (199)
                      ++-..++++|++...+    ......  ..........+...++.++.|..-.++.++......................
T Consensus       118 ~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~  197 (342)
T d1yfqa_         118 ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIR  197 (342)
T ss_dssp             EETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEE
T ss_pred             cccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeeccccccee
Confidence            3447889999884322    111111  1112233556677788999999888888876544332222222222222333


Q ss_pred             EEEEE--eCCeEEEEcCCCcEEEEee
Q psy17021        173 TSCVL--DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       173 a~~~L--d~~t~l~aD~~gNl~vlr~  196 (199)
                      +....  +...++.+-.+|++.+...
T Consensus       198 ~~~~~~~~~~~~~~~s~dg~~~v~~~  223 (342)
T d1yfqa_         198 DVALLPKEQEGYACSSIDGRVAVEFF  223 (342)
T ss_dssp             EEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred             eeEeecCCCCEEEeecCCCeEEEEEe
Confidence            33333  3346777777787776643

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=93.75  E-value=0.48  Score=36.92  Aligned_cols=93  Identities=10%  Similarity=-0.065  Sum_probs=61.5

Q ss_pred             cceEEccccCeEEEEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEe
Q psy17021         86 VPYAMCPFQGALLVGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFA  163 (199)
Q Consensus        86 ~v~aL~~f~g~LLaavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~va  163 (199)
                      .+.+..|-.+.|+.+.|+.+.+|++...+..+.  +..-...|.++.-  .++++++|+.-..|.++........+...-
T Consensus        21 ~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~--~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~   98 (311)
T d1nr0a1          21 VVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEI--YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI   98 (311)
T ss_dssp             CCCEECTTSSEEEEEETTEEEEEETTCSSCCEE--ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             EEEEEcCCCCEEEEEeCCEEEEEECCCCceeEE--EcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccccc
Confidence            345667777788888899999999976554332  2111224666664  578999999999999987766554443322


Q ss_pred             ccCCceeEEEEEEEeCCe
Q psy17021        164 DDTQPRWITTSCVLDYNT  181 (199)
Q Consensus       164 rD~~~~wvta~~~Ld~~t  181 (199)
                      +. ....+.++++-.++.
T Consensus        99 ~~-~~~~v~~v~~s~d~~  115 (311)
T d1nr0a1          99 PV-FSGPVKDISWDSESK  115 (311)
T ss_dssp             EC-SSSCEEEEEECTTSC
T ss_pred             cc-ccCcccccccccccc
Confidence            32 245688888875554

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.15  E-value=0.73  Score=34.87  Aligned_cols=103  Identities=14%  Similarity=0.091  Sum_probs=66.2

Q ss_pred             eEEccccCeEEE-EeCCEEEEEEcCCcceeeeeeccCcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCeEEEEec
Q psy17021         88 YAMCPFQGALLV-GVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQLLIFAD  164 (199)
Q Consensus        88 ~aL~~f~g~LLa-avg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~l~~var  164 (199)
                      ..+.|-.|+++| +-..+|++|+...++..+.. ..   .-+.++.-  .+++++++-..++-.+.-|+.+.+....+..
T Consensus         8 ~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~-~~---~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~   83 (360)
T d1k32a3           8 EDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVP-EP---LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEE   83 (360)
T ss_dssp             EEEEECGGGCEEEEETTEEEEECTTSSBEEECS-CC---SCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred             ccccCCCCCEEEEEECCeEEEEECCCCcEEEcc-CC---CCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeC
Confidence            346676776554 45789999999887765542 22   23555553  4667776655555557778877777776654


Q ss_pred             cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        165 DTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       165 D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                      +  +..+.++.+- |...++.+..++++++...
T Consensus        84 ~--~~~v~~~~~spdg~~l~~~~~~~~~~~~~~  114 (360)
T d1k32a3          84 N--LGNVFAMGVDRNGKFAVVANDRFEIMTVDL  114 (360)
T ss_dssp             C--CCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             C--CceEEeeeecccccccceeccccccccccc
Confidence            4  4456677776 4446777777777777643

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.02  E-value=1.5  Score=31.50  Aligned_cols=107  Identities=7%  Similarity=0.051  Sum_probs=67.8

Q ss_pred             CCcceEEccccCeEE-EEeCCEEEEEEcCCcceeeeeeccCcCceEEEEEEeCCEEEEEeccccEEEEEEeCCCCeEEEE
Q psy17021         84 DEVPYAMCPFQGALL-VGVGRYLRLYDLGKKKLLRKCENKHLPNLIVKIESMGHRIYVSDVQESVFLVRYKRYENQLLIF  162 (199)
Q Consensus        84 kG~v~aL~~f~g~LL-aavg~~v~vy~l~~~~Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~y~~~~~~l~~v  162 (199)
                      .+.+.+...-...+. ++-.+.+++|+....+.+.....  ....+..+...++.++.|..-.++.+...  ...+....
T Consensus       138 ~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~i~d~--~~~~~~~~  213 (293)
T d1p22a2         138 RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQYRDRLVVSGSSDNTIRLWDI--ECGACLRV  213 (293)
T ss_dssp             SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTEEEEEETTSCEEEEET--TTCCEEEE
T ss_pred             ccccccceecccccccccCCCceeeecCCCCcEEEEEcc--cccccccccCCCCeEEEecCCCEEEEEec--ccceeeee
Confidence            445555544444444 44578899999987765443322  23447777778999999999888877654  34433333


Q ss_pred             eccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        163 ADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       163 arD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                      ... ....+++ ...+...++.+..+|.+.++.+
T Consensus       214 ~~~-~~~~v~~-~~~~~~~l~sg~~dg~i~iwd~  245 (293)
T d1p22a2         214 LEG-HEELVRC-IRFDNKRIVSGAYDGKIKVWDL  245 (293)
T ss_dssp             ECC-CSSCEEE-EECCSSEEEEEETTSCEEEEEH
T ss_pred             ecc-cceeeee-ccccceEEEEEcCCCEEEEEEC
Confidence            332 2233443 3346678888999999988753

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=91.79  E-value=1.8  Score=32.22  Aligned_cols=119  Identities=13%  Similarity=0.148  Sum_probs=65.4

Q ss_pred             eeEEEeeccCCcceEE--ccccCe-EEEEe--CCEEEEEEcCCcc----eeeeeeccCcCceEEEEEEeCCEEEEEeccc
Q psy17021         75 MEFVHKTSVDEVPYAM--CPFQGA-LLVGV--GRYLRLYDLGKKK----LLRKCENKHLPNLIVKIESMGHRIYVSDVQE  145 (199)
Q Consensus        75 lesVh~~~~kG~v~aL--~~f~g~-LLaav--g~~v~vy~l~~~~----Ll~~~~~~~~~~~i~~l~~~~~~IlVGD~~~  145 (199)
                      ++.+...+..+.+..+  .| +|+ |.++-  .+.+.+|++....    +.........+ .-..+...|+++++++-..
T Consensus        27 l~~~~~~~~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p-~~l~~spDg~~l~v~~~~~  104 (333)
T d1ri6a_          27 LTLTQVVDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL-THISTDHQGQFVFVGSYNA  104 (333)
T ss_dssp             EEEEEEEECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC-SEEEECTTSSEEEEEETTT
T ss_pred             eEEEEEEcCCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc-eEEEEcCCCCEEeecccCC
Confidence            4555556666666654  44 454 54655  4789999996442    22222222112 1233444578999998644


Q ss_pred             -cEEEEEEeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCCC-cEEEEee
Q psy17021        146 -SVFLVRYKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKFG-NVCIVST  196 (199)
Q Consensus       146 -Sv~ll~y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~g-Nl~vlr~  196 (199)
                       ++.++.... ............+.++.++.+- |...++.++... .+.++..
T Consensus       105 ~~v~~~~~~~-~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~  157 (333)
T d1ri6a_         105 GNVSVTRLED-GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTV  157 (333)
T ss_dssp             TEEEEEEEET-TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             Cceeeecccc-ccceecccccCCCccceEEEeeecceeeeccccccceeeEEEe
Confidence             677766543 2334444555666777777665 333455555443 3555543

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.74  E-value=2.1  Score=32.75  Aligned_cols=108  Identities=13%  Similarity=0.158  Sum_probs=63.1

Q ss_pred             EccccCeEEEE--eCCEEEEEEcCCcceeeeeecc-----CcCceEEEEEE--eCCEEEEEeccccEEEEEEeCCCCe--
Q psy17021         90 MCPFQGALLVG--VGRYLRLYDLGKKKLLRKCENK-----HLPNLIVKIES--MGHRIYVSDVQESVFLVRYKRYENQ--  158 (199)
Q Consensus        90 L~~f~g~LLaa--vg~~v~vy~l~~~~Ll~~~~~~-----~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~y~~~~~~--  158 (199)
                      +.+-++.++++  .++.+++|+....+........     .....+.++..  .++++++|..-..+.++........  
T Consensus       212 ~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~  291 (388)
T d1erja_         212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD  291 (388)
T ss_dssp             ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred             ccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccc
Confidence            34446665543  3678999999765543322111     01123666665  4678999988778877765432211  


Q ss_pred             -------EEEEeccCCceeEEEEEEE-eCCeEEEEcCCCcEEEEeec
Q psy17021        159 -------LLIFADDTQPRWITTSCVL-DYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       159 -------l~~varD~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~~  197 (199)
                             -...........++++.+- |...++.+..+|.|.++.+.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~  338 (388)
T d1erja_         292 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK  338 (388)
T ss_dssp             -------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred             cccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence                   1122233445677888876 44467888999999988643

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.24  E-value=3.3  Score=29.72  Aligned_cols=30  Identities=7%  Similarity=0.032  Sum_probs=21.3

Q ss_pred             ceeEEEEEEEeC-CeEEEEcCCCcEEEEeec
Q psy17021        168 PRWITTSCVLDY-NTVASADKFGNVCIVSTY  197 (199)
Q Consensus       168 ~~wvta~~~Ld~-~t~l~aD~~gNl~vlr~~  197 (199)
                      ..+++++.+-.+ +.++.+..+|.|.++.++
T Consensus       247 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~  277 (317)
T d1vyhc1         247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYK  277 (317)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            456777777744 457778888998887653

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.15  E-value=5  Score=30.56  Aligned_cols=175  Identities=11%  Similarity=0.041  Sum_probs=93.2

Q ss_pred             CCEEEEeec--CeeEEEecchhhhhhhhhhccc--ccCceeeeeEEEEE--cCceeEE-------------CCeeeEEEe
Q psy17021         20 QGALLVGVG--RYLRLYDLGKKKLLRKCENKVR--IKGFRKAHQTHTHS--GRSDRLV-------------GNAMEFVHK   80 (199)
Q Consensus        20 ~~~ll~~~~--~~l~~y~~g~k~ll~k~~~~~~--~~~~~~~~~~~~~~--~~~ri~v-------------gdklesVh~   80 (199)
                      .|++||.-+  +.+|+||+..++.++..+....  .... ..-+.-..|  .+.++++             -+.-+.+..
T Consensus        76 ~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  154 (325)
T d1pgua1          76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGE  154 (325)
T ss_dssp             TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEE
T ss_pred             CCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccc-cCcEEEEEECCCCCccceeeccccceEEEEeeccccccee
Confidence            567776444  7899999987776665443210  0000 001111222  2223322             111222322


Q ss_pred             ec-cCCcceEE--ccccCe-EE-EEeCCEEEEEEcCCcceeeeeec-cCcCceEEEEEEe---CCEEEEEeccccEEEEE
Q psy17021         81 TS-VDEVPYAM--CPFQGA-LL-VGVGRYLRLYDLGKKKLLRKCEN-KHLPNLIVKIESM---GHRIYVSDVQESVFLVR  151 (199)
Q Consensus        81 ~~-~kG~v~aL--~~f~g~-LL-aavg~~v~vy~l~~~~Ll~~~~~-~~~~~~i~~l~~~---~~~IlVGD~~~Sv~ll~  151 (199)
                      .. ..++++++  .+-... ++ ++....+++|+....+....... ......+.++.-.   +++++.|..-.+|.++ 
T Consensus       155 ~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iw-  233 (325)
T d1pgua1         155 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF-  233 (325)
T ss_dssp             CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEE-
T ss_pred             eeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeee-
Confidence            22 34566654  333444 34 33478999999976554333222 2123357777753   5788889888888876 


Q ss_pred             EeCCCCeE-EEEeccCCcee--EEEEEEEeCCeEEEEcCCCcEEEEeec
Q psy17021        152 YKRYENQL-LIFADDTQPRW--ITTSCVLDYNTVASADKFGNVCIVSTY  197 (199)
Q Consensus       152 y~~~~~~l-~~varD~~~~w--vta~~~Ld~~t~l~aD~~gNl~vlr~~  197 (199)
                       +...++. ..+..+..+.+  +.++..-|...++.+-.++.+.++.+.
T Consensus       234 -d~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~  281 (325)
T d1pgua1         234 -DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT  281 (325)
T ss_dssp             -ETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred             -eeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECC
Confidence             4444444 44433333332  344444466688888888998887543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=85.94  E-value=2.7  Score=31.21  Aligned_cols=93  Identities=16%  Similarity=0.186  Sum_probs=58.8

Q ss_pred             eCCEEEEEEcCCc---ceeeeeeccCcCceEEEEE--EeCCEEEEEecc-ccEEEEEEeCCCCeEEEEeccCCceeEEEE
Q psy17021        101 VGRYLRLYDLGKK---KLLRKCENKHLPNLIVKIE--SMGHRIYVSDVQ-ESVFLVRYKRYENQLLIFADDTQPRWITTS  174 (199)
Q Consensus       101 vg~~v~vy~l~~~---~Ll~~~~~~~~~~~i~~l~--~~~~~IlVGD~~-~Sv~ll~y~~~~~~l~~varD~~~~wvta~  174 (199)
                      -+++|++|++...   ++++....   +..+.+|.  ..|.+++++.-. .++..+..+.....+...........++++
T Consensus        12 ~~~~I~v~~~~~~~~l~~~~~~~~---~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l   88 (333)
T d1ri6a_          12 ESQQIHVWNLNHEGALTLTQVVDV---PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHI   88 (333)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEEEC---SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEE
T ss_pred             CCCcEEEEEEcCCCCeEEEEEEcC---CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEE
Confidence            3688999999643   23333333   23344444  457788888875 578888888777778777776665556666


Q ss_pred             EEEeC-CeEEEEcC-CCcEEEEee
Q psy17021        175 CVLDY-NTVASADK-FGNVCIVST  196 (199)
Q Consensus       175 ~~Ld~-~t~l~aD~-~gNl~vlr~  196 (199)
                      .+-.+ ..+++++. .+.+.+++.
T Consensus        89 ~~spDg~~l~v~~~~~~~v~~~~~  112 (333)
T d1ri6a_          89 STDHQGQFVFVGSYNAGNVSVTRL  112 (333)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEE
T ss_pred             EEcCCCCEEeecccCCCceeeecc
Confidence            66533 35666654 455655543

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.64  E-value=4.5  Score=28.63  Aligned_cols=177  Identities=9%  Similarity=0.064  Sum_probs=91.8

Q ss_pred             cCCCcceeecccCCEEEE-eec-CeeEEEecchhhhhhhhhhcccccCceeeeeEEEEEcCceeEEC--Cee--------
Q psy17021          8 SVDEVPYAMCPFQGALLV-GVG-RYLRLYDLGKKKLLRKCENKVRIKGFRKAHQTHTHSGRSDRLVG--NAM--------   75 (199)
Q Consensus         8 ~~~~~~~~~~~f~~~ll~-~~~-~~l~~y~~g~k~ll~k~~~~~~~~~~~~~~~~~~~~~~~ri~vg--dkl--------   75 (199)
                      +...-+.++. |.|+.|| |-. +.+|+||+...++++.-..   ....   + .-..+.+..++.|  |..        
T Consensus        13 ~~~~~V~c~~-~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~---H~~~---V-~~v~~~~~~l~s~s~D~~i~~~~~~~   84 (293)
T d1p22a2          13 ETSKGVYCLQ-YDDQKIVSGLRDNTIKIWDKNTLECKRILTG---HTGS---V-LCLQYDERVIITGSSDSTVRVWDVNT   84 (293)
T ss_dssp             SSCCCEEEEE-CCSSEEEEEESSSCEEEEESSSCCEEEEECC---CSSC---E-EEEECCSSEEEEEETTSCEEEEESSS
T ss_pred             CCCCCEEEEE-EcCCEEEEEeCCCeEEEEECCCCcEEEEEec---CCCC---E-eeeecccceeeccccccccccccccc
Confidence            3334456764 5666555 433 7899999987766553211   1122   2 2233444444443  111        


Q ss_pred             --eEEEeeccCCcceEEccccCeEEEEe-CCEEEEEEcCCcceee-eeeccCcCceEEEEEEeCCEEEEEeccccEEEEE
Q psy17021         76 --EFVHKTSVDEVPYAMCPFQGALLVGV-GRYLRLYDLGKKKLLR-KCENKHLPNLIVKIESMGHRIYVSDVQESVFLVR  151 (199)
Q Consensus        76 --esVh~~~~kG~v~aL~~f~g~LLaav-g~~v~vy~l~~~~Ll~-~~~~~~~~~~i~~l~~~~~~IlVGD~~~Sv~ll~  151 (199)
                        .............+..+..+.++++. ...+++|+....+... ..........+.......+.++.+..-.++.++ 
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~-  163 (293)
T d1p22a2          85 GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW-  163 (293)
T ss_dssp             CCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE-
T ss_pred             ccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeee-
Confidence              11222222333344444455555444 6778999986543211 122221223466666677777777666665554 


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEEeCCeEEEEcCCCcEEEEee
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVLDYNTVASADKFGNVCIVST  196 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~Ld~~t~l~aD~~gNl~vlr~  196 (199)
                       +....+....-.. .+..+.++.+ ++..++.+..++.+.++.+
T Consensus       164 -d~~~~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~  205 (293)
T d1p22a2         164 -NTSTCEFVRTLNG-HKRGIACLQY-RDRLVVSGSSDNTIRLWDI  205 (293)
T ss_dssp             -ETTTCCEEEEEEC-CSSCEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred             -cCCCCcEEEEEcc-cccccccccC-CCCeEEEecCCCEEEEEec
Confidence             4444433322222 2233444433 6778888899999888754

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.95  E-value=3.7  Score=32.14  Aligned_cols=33  Identities=18%  Similarity=0.252  Sum_probs=21.6

Q ss_pred             CcceEEccc-cCeEEEEe--CCEEEEEEcCCcceee
Q psy17021         85 EVPYAMCPF-QGALLVGV--GRYLRLYDLGKKKLLR  117 (199)
Q Consensus        85 G~v~aL~~f-~g~LLaav--g~~v~vy~l~~~~Ll~  117 (199)
                      +.|++++-= +|++||..  .++|++|++...+++.
T Consensus       290 ~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~  325 (393)
T d1sq9a_         290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT  325 (393)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             CceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEE
Confidence            556665421 45665544  5899999998776554

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.29  E-value=8.5  Score=29.88  Aligned_cols=102  Identities=15%  Similarity=0.148  Sum_probs=58.9

Q ss_pred             CeEEEE-eCCEEEEEEcCCcceeeeeec----cCcCceEEEEEE--eCCEEEEEeccccEEEEE-EeCCCCeEEEEec--
Q psy17021         95 GALLVG-VGRYLRLYDLGKKKLLRKCEN----KHLPNLIVKIES--MGHRIYVSDVQESVFLVR-YKRYENQLLIFAD--  164 (199)
Q Consensus        95 g~LLaa-vg~~v~vy~l~~~~Ll~~~~~----~~~~~~i~~l~~--~~~~IlVGD~~~Sv~ll~-y~~~~~~l~~var--  164 (199)
                      |.|+.| -.++|++|++...+.+.....    ..-...|.++.-  .+.+++.|--=++...++ |+.+.++....-+  
T Consensus       196 g~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~  275 (393)
T d1sq9a_         196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP  275 (393)
T ss_dssp             SEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred             CEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccc
Confidence            344433 357899999986654433221    111224666664  577888885444433322 4544332222111  


Q ss_pred             ----------cCCceeEEEEEEE-eCCeEEEEcCCCcEEEEee
Q psy17021        165 ----------DTQPRWITTSCVL-DYNTVASADKFGNVCIVST  196 (199)
Q Consensus       165 ----------D~~~~wvta~~~L-d~~t~l~aD~~gNl~vlr~  196 (199)
                                .-...||++++|- |...++.+..++.|.+..+
T Consensus       276 ~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~  318 (393)
T d1sq9a_         276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV  318 (393)
T ss_dssp             --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred             cccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEEC
Confidence                      1245689999997 4457888899999988754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=82.36  E-value=8.9  Score=29.45  Aligned_cols=114  Identities=12%  Similarity=0.024  Sum_probs=71.2

Q ss_pred             eccCCcceEEcccc-CeEEEEeCCEEEEEEcCCcceeeeeecc-C-cCceEEEEEEe-CCEEEEEeccc-----cEEEEE
Q psy17021         81 TSVDEVPYAMCPFQ-GALLVGVGRYLRLYDLGKKKLLRKCENK-H-LPNLIVKIESM-GHRIYVSDVQE-----SVFLVR  151 (199)
Q Consensus        81 ~~~kG~v~aL~~f~-g~LLaavg~~v~vy~l~~~~Ll~~~~~~-~-~~~~i~~l~~~-~~~IlVGD~~~-----Sv~ll~  151 (199)
                      ..++..+.++.+.. |.|++|..+.+..|+....++...+... + ....+.++.+. +.++.+||+.+     .-.+++
T Consensus        55 ~~~~~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~  134 (295)
T d2ghsa1          55 HALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH  134 (295)
T ss_dssp             EECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred             EECCCCcEEEEEecCCCEEEEEeCccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEee
Confidence            45566777777664 6899999999999999876654433322 1 12346777664 45788998764     334555


Q ss_pred             EeCCCCeEEEEeccCCceeEEEEEEE-eCCeEEEEcCC-CcEEEEeecC
Q psy17021        152 YKRYENQLLIFADDTQPRWITTSCVL-DYNTVASADKF-GNVCIVSTYR  198 (199)
Q Consensus       152 y~~~~~~l~~varD~~~~wvta~~~L-d~~t~l~aD~~-gNl~vlr~~~  198 (199)
                      +  ..+++.++..+...  ...+.+- |.++++.+|.. +.|+.+.++.
T Consensus       135 ~--~~g~~~~~~~~~~~--~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~  179 (295)
T d2ghsa1         135 V--AKGKVTKLFADISI--PNSICFSPDGTTGYFVDTKVNRLMRVPLDA  179 (295)
T ss_dssp             E--ETTEEEEEEEEESS--EEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred             e--cCCcEEEEeeccCC--cceeeecCCCceEEEeecccceeeEeeecc
Confidence            5  35778888776543  2344443 44467778864 4566666543