Psyllid ID: psy17041


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
cccccccccccHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEccccEEEEcccccccccccccccccccHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHccEEEEcc
ccccEEEccccHHHHHHHcccccHHHHHHHHHHHcccccccccccEccccccccHcHcccccccccccEEEccccEEEcccccccEEEEEccccccEcEcccccccccccccccccccEEEEEcccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHEEcc
mrsgrllaeesPQVLLQTYGCQSLEEVFLKLSRkqgndatannvpevniaNNISLAtlqwgnkkdepvyvteesgvvglmfhqskeiliqdhsnghyddyypdpesainAVRVGDAWGALYFTDNFTDALVARMVLgrdadeetldqseirpngksVMMIEqeddnsscgdccplttkgkTKALLQKNFLRMWRNVGCHLAS
mrsgrllaeespqvlLQTYGCQSLEEVFLKLSRKQGNdatannvpevnIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRdadeetldqseirpngkSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
*************VLLQTYGCQSLEEVFLKLSR******TANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLG*******************************CGDCCPLTTKGKTKALLQKNFLRMWRNVGCHL**
*RSGRLLAEESPQVLLQTYGCQSLEEVFLKL************************************************************************************AWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHL**
*********ESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
****RLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGR****************************SSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQWGNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGALYFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGKTKALLQKNFLRMWRNVGCHLAS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
193700092 811 PREDICTED: ABC transporter G family memb 0.693 0.172 0.535 9e-42
328718628 781 PREDICTED: ABC transporter G family memb 0.693 0.179 0.535 1e-41
332027462 763 ABC transporter G family member 20 [Acro 0.737 0.195 0.497 3e-39
322789827 809 hypothetical protein SINV_01380 [Solenop 0.737 0.184 0.497 9e-38
307187335 818 ABC transporter G family member 20 [Camp 0.707 0.174 0.509 4e-37
242005365 779 ABC transporter, putative [Pediculus hum 0.757 0.196 0.490 4e-37
307196735 760 ABC transporter G family member 20 [Harp 0.732 0.194 0.490 5e-36
345496012 768 PREDICTED: ABC transporter G family memb 0.722 0.190 0.490 7e-36
270013184 767 hypothetical protein TcasGA2_TC011755 [T 0.698 0.183 0.5 2e-35
347970382 777 AGAP003680-PA [Anopheles gambiae str. PE 0.742 0.193 0.492 2e-35
>gi|193700092|ref|XP_001951744.1| PREDICTED: ABC transporter G family member 20-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/200 (53%), Positives = 118/200 (59%), Gaps = 60/200 (30%)

Query: 1   MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQW 60
           MRSGRLLAEESP+ LL  Y CQSLEEVFLKLSRKQG D      P VNI+NNISLATL W
Sbjct: 296 MRSGRLLAEESPRALLSMYHCQSLEEVFLKLSRKQGTDGQPQETP-VNISNNISLATLNW 354

Query: 61  GNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNGHYDDYYPDPESAINAVRVGDAWGAL 120
           G KKDEPVYVTEESGVVGL FHQSKE+L Q+ SNG            IN           
Sbjct: 355 G-KKDEPVYVTEESGVVGLNFHQSKEVLAQEQSNG------------IN----------- 390

Query: 121 YFTDNFTDALVARMVLGRDADEETLDQSEIRPNGKSVMMIEQEDDNSSCGDCCPLTTKGK 180
                           G+ AD +               M+E + D+S    CC +TT+GK
Sbjct: 391 ----------------GKLADMQ---------------MMEPQYDSS----CCEITTRGK 415

Query: 181 TKALLQKNFLRMWRNVGCHL 200
           TKALLQKNFLRMWRNVG  L
Sbjct: 416 TKALLQKNFLRMWRNVGVML 435




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328718628|ref|XP_003246532.1| PREDICTED: ABC transporter G family member 20-like isoform 2 [Acyrthosiphon pisum] gi|328718630|ref|XP_003246533.1| PREDICTED: ABC transporter G family member 20-like isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|332027462|gb|EGI67545.1| ABC transporter G family member 20 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322789827|gb|EFZ14974.1| hypothetical protein SINV_01380 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307187335|gb|EFN72463.1| ABC transporter G family member 20 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|242005365|ref|XP_002423539.1| ABC transporter, putative [Pediculus humanus corporis] gi|212506668|gb|EEB10801.1| ABC transporter, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307196735|gb|EFN78194.1| ABC transporter G family member 20 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|345496012|ref|XP_001604973.2| PREDICTED: ABC transporter G family member 20-like isoform 1 [Nasonia vitripennis] gi|345496014|ref|XP_003427623.1| PREDICTED: ABC transporter G family member 20-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|270013184|gb|EFA09632.1| hypothetical protein TcasGA2_TC011755 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|347970382|ref|XP_313462.4| AGAP003680-PA [Anopheles gambiae str. PEST] gi|333468907|gb|EAA08957.4| AGAP003680-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
FB|FBgn0039594 808 CG9990 [Drosophila melanogaste 0.514 0.128 0.543 1.3e-35
FB|FBgn0053970 777 CG33970 [Drosophila melanogast 0.158 0.041 0.625 4.4e-08
FB|FBgn0031734 711 CG11147 [Drosophila melanogast 0.287 0.081 0.379 9.9e-06
FB|FBgn0039594 CG9990 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 254 (94.5 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
 Identities = 62/114 (54%), Positives = 73/114 (64%)

Query:     1 MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSRKQGNDATANNVPEVNIANNISLATLQW 60
             MRSG LLAEESP VLL  Y C SLEEVFLKLSR Q       +V  VN +NNISL  + +
Sbjct:   281 MRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKG---DVTHVNFSNNISLHAMAF 337

Query:    61 GNKKDEPVYVTEESGVVGLMFHQSKEILIQDHSNG-----HYDDYYPDPESAIN 109
             G+K D+P   ++E GVVGL FHQSKE+LI D SNG     + + Y P P    N
Sbjct:   338 GSKMDKPSS-SQEGGVVGLNFHQSKEVLIND-SNGSIYTLNQEPYSPPPSRRNN 389


GO:0043190 "ATP-binding cassette (ABC) transporter complex" evidence=ISS
GO:0005215 "transporter activity" evidence=ISS
GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISS
GO:0006810 "transport" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
FB|FBgn0053970 CG33970 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0031734 CG11147 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 202
PF12051 382 DUF3533: Protein of unknown function (DUF3533); In 96.72
TIGR03061164 pip_yhgE_Nterm YhgE/Pip N-terminal domain. This fa 95.68
PF1239923 BCA_ABC_TP_C: Branched-chain amino acid ATP-bindin 89.86
PF12698 344 ABC2_membrane_3: ABC-2 family transporter protein; 88.94
>PF12051 DUF3533: Protein of unknown function (DUF3533); InterPro: IPR022703 This transmembrane domain is functionally uncharacterised Back     alignment and domain information
Probab=96.72  E-value=0.0032  Score=57.82  Aligned_cols=36  Identities=31%  Similarity=0.446  Sum_probs=33.4

Q ss_pred             CHHHHHHHHHcCcEEEEEEcCCCchHHHHHHH-HhCC
Q psy17041        103 DPESAINAVRVGDAWGALYFTDNFTDALVARM-VLGR  138 (202)
Q Consensus       103 s~seA~~avk~G~~WG~I~F~~NFTe~l~~R~-~~g~  138 (202)
                      +.++|.++|++||+||+|+.++|||+.|..=+ +.|.
T Consensus        80 ~~~~~~~~V~~~kywaAI~I~~naT~~l~~al~~~~~  116 (382)
T PF12051_consen   80 SPEEAREGVYDGKYWAAIVIPPNATANLYSALSQNGN  116 (382)
T ss_pred             CHHHHHHHHhcccEEEEEEeCCChhHHHHHHhccCCC
Confidence            99999999999999999999999999999888 5554



It is found in bacterial and eukaryotic proteins.

>TIGR03061 pip_yhgE_Nterm YhgE/Pip N-terminal domain Back     alignment and domain information
>PF12399 BCA_ABC_TP_C: Branched-chain amino acid ATP-binding cassette transporter Back     alignment and domain information
>PF12698 ABC2_membrane_3: ABC-2 family transporter protein; PDB: 2P0S_B 3CNI_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
3cni_A156 Putative ABC type-2 transporter; structural genomi 96.86
>3cni_A Putative ABC type-2 transporter; structural genomics, thermotoga MARI PSI-2, protein structure initiative; 2.30A {Thermotoga maritima MSB8} Back     alignment and structure
Probab=96.86  E-value=0.00041  Score=54.17  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=29.9

Q ss_pred             CCCHHHHHHHHHcCcEEEEEEcCCCchHHHHH
Q psy17041        101 YPDPESAINAVRVGDAWGALYFTDNFTDALVA  132 (202)
Q Consensus       101 Y~s~seA~~avk~G~~WG~I~F~~NFTe~l~~  132 (202)
                      +++.+||.+++++|+++++|+||+||++.|..
T Consensus        41 ~~s~~ea~~~l~~g~~~~~l~IP~~Fs~~l~~   72 (156)
T 3cni_A           41 GSDLKEAEEAVKKEKAPAIIVIPKGFSQSLES   72 (156)
T ss_dssp             ESCHHHHHHHHHHHTCSEEEEECTTHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCeeEEEEECcchHHHHhC
Confidence            47999999999999999999999999998874




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 202
d1vpla_238 c.37.1.12 (A:) Putative ABC transporter TM0544 {Th 0.002
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Length = 238 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: ABC transporter ATPase domain-like
domain: Putative ABC transporter TM0544
species: Thermotoga maritima [TaxId: 2336]
 Score = 35.7 bits (82), Expect = 0.002
 Identities = 8/33 (24%), Positives = 20/33 (60%)

Query: 1   MRSGRLLAEESPQVLLQTYGCQSLEEVFLKLSR 33
           + +G ++   + + L + Y  Q++EEVF ++ +
Sbjct: 206 IHNGTIVETGTVEELKERYKAQNIEEVFEEVVK 238


Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00