Psyllid ID: psy17045


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNVQI
ccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccEEEEEEEcccEEEEcEEEEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccccccccEEEEEEEEccEEEEEEEEEccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccEEEEEEEEcccEEEEEEEEEEcccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccEcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccccccccccEEEEEEEEccHEEEEEEEEcHccc
MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECsrrfpltlfgnegpyksdkIILASSQDTLKTIVNLngdsisfaDIHLKIHRHHQHQTQTYKTSilkehpwklhQIQDAGNHLQFALYHidnvddgyqfkssEEVLHTLDNILNCLQRGrtslivprkrTIDDLMksrnmksltpplpedlaISFYIQSHKLICAAYQLSNVQI
MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNClqrgrtslivprkrtiddlmksrnmksltpplPEDLAISFYIQSHKLICAAYQLSNVQI
MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNVQI
********ALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTID****************EDLAISFYIQSHKLICAAYQL*****
***********LQKEFEWVINKEVHIILKQLQTILVECSRR************************TLKTIVNLNGDSISFADIHLKIHR***********SILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNV**
********ALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIH***********TSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNVQI
***VEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNV**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNVQI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query211 2.2.26 [Sep-21-2011]
Q9VVE2268 Protein rogdi OS=Drosophi no N/A 0.976 0.768 0.595 3e-67
Q7ZVT5284 Protein rogdi homolog OS= yes N/A 0.976 0.725 0.393 9e-36
Q5R7X1287 Protein rogdi homolog OS= yes N/A 0.943 0.693 0.401 1e-35
Q148F6287 Protein rogdi homolog OS= yes N/A 0.943 0.693 0.392 2e-35
Q9GZN7287 Protein rogdi homolog OS= yes N/A 0.943 0.693 0.397 4e-35
Q4V7D2287 Protein rogdi homolog OS= yes N/A 0.924 0.679 0.395 1e-34
Q3TDK6287 Protein rogdi homolog OS= yes N/A 0.924 0.679 0.395 2e-34
O17213292 Protein rogdi homolog OS= yes N/A 0.672 0.486 0.299 5e-15
>sp|Q9VVE2|ROGDI_DROME Protein rogdi OS=Drosophila melanogaster GN=rogdi PE=1 SV=2 Back     alignment and function desciption
 Score =  254 bits (649), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 125/210 (59%), Positives = 160/210 (76%), Gaps = 4/210 (1%)

Query: 1   MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIIL 60
           + + E+EEAL LQ EFEWV+ +EVH ILKQL++ILVEC+ RFP+ L+ NEG  K++K IL
Sbjct: 4   LADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLYENEGK-KTEKFIL 62

Query: 61  ASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHL 120
             S D LK ++ L GD+I+ ADI  K+ +     +QT +TSI  + PWKL Q+QDA NHL
Sbjct: 63  TVSPDQLKAVLTLTGDAITQADISFKLCKA---PSQTQRTSITHDSPWKLQQVQDAANHL 119

Query: 121 QFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSL 180
           Q A+ HID+VDD Y FK+S+EVLH + NIL+ LQRGR SL+VP+K+ ID+L+K RNMKSL
Sbjct: 120 QTAINHIDDVDDSYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRNMKSL 179

Query: 181 TPPLPEDLAISFYIQSHKLICAAYQLSNVQ 210
            P LPEDLA+SFY+QSHKLI A YQL N Q
Sbjct: 180 VPNLPEDLAVSFYLQSHKLIIAVYQLLNNQ 209





Drosophila melanogaster (taxid: 7227)
>sp|Q7ZVT5|ROGDI_DANRE Protein rogdi homolog OS=Danio rerio GN=rogdi PE=2 SV=1 Back     alignment and function description
>sp|Q5R7X1|ROGDI_PONAB Protein rogdi homolog OS=Pongo abelii GN=ROGDI PE=2 SV=1 Back     alignment and function description
>sp|Q148F6|ROGDI_BOVIN Protein rogdi homolog OS=Bos taurus GN=ROGDI PE=2 SV=1 Back     alignment and function description
>sp|Q9GZN7|ROGDI_HUMAN Protein rogdi homolog OS=Homo sapiens GN=ROGDI PE=2 SV=1 Back     alignment and function description
>sp|Q4V7D2|ROGDI_RAT Protein rogdi homolog OS=Rattus norvegicus GN=Rogdi PE=2 SV=1 Back     alignment and function description
>sp|Q3TDK6|ROGDI_MOUSE Protein rogdi homolog OS=Mus musculus GN=Rogdi PE=2 SV=2 Back     alignment and function description
>sp|O17213|ROGDI_CAEEL Protein rogdi homolog OS=Caenorhabditis elegans GN=H14A12.3 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
158296244 381 AGAP006653-PA [Anopheles gambiae str. PE 0.976 0.540 0.633 6e-69
118788387265 AGAP006653-PB [Anopheles gambiae str. PE 0.976 0.777 0.638 1e-68
312372632 816 hypothetical protein AND_19886 [Anophele 0.976 0.252 0.623 1e-68
156545637275 PREDICTED: protein rogdi-like [Nasonia v 0.976 0.749 0.598 1e-67
307209237265 Protein rogdi [Harpegnathos saltator] 0.976 0.777 0.602 4e-67
383854197266 PREDICTED: protein rogdi-like [Megachile 0.976 0.774 0.612 4e-67
195440012 370 GK12664 [Drosophila willistoni] gi|19416 0.976 0.556 0.604 5e-67
66564441266 PREDICTED: protein rogdi [Apis mellifera 0.976 0.774 0.612 5e-67
170033153 378 conserved hypothetical protein [Culex qu 0.976 0.544 0.628 6e-67
332019827266 Protein rogdi [Acromyrmex echinatior] 0.976 0.774 0.602 8e-67
>gi|158296244|ref|XP_001688944.1| AGAP006653-PA [Anopheles gambiae str. PEST] gi|157016418|gb|EDO63950.1| AGAP006653-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  265 bits (678), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 133/210 (63%), Positives = 164/210 (78%), Gaps = 4/210 (1%)

Query: 1   MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIIL 60
           M + EKEEAL LQ EFEWV+++EVH +LKQL  ILVEC+ RFP+ L+GNEG  K DK +L
Sbjct: 117 MADCEKEEALNLQVEFEWVLHEEVHSVLKQLHVILVECAHRFPVPLYGNEG-KKQDKFVL 175

Query: 61  ASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHL 120
            ++ + LK IV L GDSI+ ADI+ K+    + Q Q  +TSI +++PWK+ Q+QDA NHL
Sbjct: 176 TAAPEQLKCIVTLTGDSITHADINFKVQ---RQQQQIQRTSITQDYPWKIQQVQDAANHL 232

Query: 121 QFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSL 180
           Q A+ HIDNVD  Y FK+S+EVLH L NIL  LQRGRTSL+VPRK+ ID+LMKSRNMK+L
Sbjct: 233 QQAINHIDNVDSAYHFKTSDEVLHILGNILGALQRGRTSLVVPRKKPIDELMKSRNMKAL 292

Query: 181 TPPLPEDLAISFYIQSHKLICAAYQLSNVQ 210
           +P LPEDLAISFYIQSHKLI  AYQL+N Q
Sbjct: 293 SPNLPEDLAISFYIQSHKLIFVAYQLTNFQ 322




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118788387|ref|XP_316684.3| AGAP006653-PB [Anopheles gambiae str. PEST] gi|116127254|gb|EAA10769.4| AGAP006653-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312372632|gb|EFR20554.1| hypothetical protein AND_19886 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|156545637|ref|XP_001603775.1| PREDICTED: protein rogdi-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307209237|gb|EFN86344.1| Protein rogdi [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383854197|ref|XP_003702608.1| PREDICTED: protein rogdi-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|195440012|ref|XP_002067853.1| GK12664 [Drosophila willistoni] gi|194163938|gb|EDW78839.1| GK12664 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|66564441|ref|XP_624710.1| PREDICTED: protein rogdi [Apis mellifera] gi|380019939|ref|XP_003693858.1| PREDICTED: protein rogdi-like [Apis florea] Back     alignment and taxonomy information
>gi|170033153|ref|XP_001844443.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873722|gb|EDS37105.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|332019827|gb|EGI60288.1| Protein rogdi [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
FB|FBgn0036697268 rogdi "rogdi" [Drosophila mela 0.976 0.768 0.595 1.8e-62
ZFIN|ZDB-GENE-030131-7582298 rogdi "rogdi homolog (Drosophi 0.976 0.691 0.398 1.9e-35
UNIPROTKB|F1RK77287 ROGDI "Uncharacterized protein 0.924 0.679 0.4 8.3e-35
UNIPROTKB|Q148F6287 ROGDI "Protein rogdi homolog" 0.971 0.714 0.388 1.3e-34
UNIPROTKB|Q9GZN7287 ROGDI "Protein rogdi homolog" 0.971 0.714 0.393 2.2e-34
RGD|1560021287 Rogdi "rogdi homolog (Drosophi 0.943 0.693 0.392 5.8e-34
MGI|MGI:1913299287 Rogdi "rogdi homolog (Drosophi 0.943 0.693 0.392 1.5e-33
UNIPROTKB|F1NFQ8284 ROGDI "Uncharacterized protein 0.924 0.686 0.38 2.5e-33
WB|WBGene00019196292 H14A12.3 [Caenorhabditis elega 0.668 0.482 0.314 3e-14
FB|FBgn0036697 rogdi "rogdi" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 125/210 (59%), Positives = 160/210 (76%)

Query:     1 MTEVEKEEALCLQKEFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIIL 60
             + + E+EEAL LQ EFEWV+ +EVH ILKQL++ILVEC+ RFP+ L+ NEG  K++K IL
Sbjct:     4 LADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLYENEGK-KTEKFIL 62

Query:    61 ASSQDTLKTIVNLNGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHL 120
               S D LK ++ L GD+I+ ADI  K+ +     +QT +TSI  + PWKL Q+QDA NHL
Sbjct:    63 TVSPDQLKAVLTLTGDAITQADISFKLCKA---PSQTQRTSITHDSPWKLQQVQDAANHL 119

Query:   121 QFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSL 180
             Q A+ HID+VDD Y FK+S+EVLH + NIL+ LQRGR SL+VP+K+ ID+L+K RNMKSL
Sbjct:   120 QTAINHIDDVDDSYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRNMKSL 179

Query:   181 TPPLPEDLAISFYIQSHKLICAAYQLSNVQ 210
              P LPEDLA+SFY+QSHKLI A YQL N Q
Sbjct:   180 VPNLPEDLAVSFYLQSHKLIIAVYQLLNNQ 209




GO:0005575 "cellular_component" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0008355 "olfactory learning" evidence=IMP
GO:0007611 "learning or memory" evidence=IMP
GO:0048149 "behavioral response to ethanol" evidence=IMP
ZFIN|ZDB-GENE-030131-7582 rogdi "rogdi homolog (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RK77 ROGDI "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q148F6 ROGDI "Protein rogdi homolog" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GZN7 ROGDI "Protein rogdi homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1560021 Rogdi "rogdi homolog (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1913299 Rogdi "rogdi homolog (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFQ8 ROGDI "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
WB|WBGene00019196 H14A12.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5R7X1ROGDI_PONABNo assigned EC number0.40190.94310.6933yesN/A
Q9GZN7ROGDI_HUMANNo assigned EC number0.39700.94310.6933yesN/A
Q7ZVT5ROGDI_DANRENo assigned EC number0.39330.97630.7253yesN/A
Q4V7D2ROGDI_RATNo assigned EC number0.3950.92410.6794yesN/A
Q148F6ROGDI_BOVINNo assigned EC number0.39210.94310.6933yesN/A
Q3TDK6ROGDI_MOUSENo assigned EC number0.3950.92410.6794yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
pfam10259274 pfam10259, Rogdi_lz, Rogdi leucine zipper containi 3e-46
>gnl|CDD|220658 pfam10259, Rogdi_lz, Rogdi leucine zipper containing protein Back     alignment and domain information
 Score =  153 bits (389), Expect = 3e-46
 Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 15/201 (7%)

Query: 15  EFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASS-QDTLKTIVNL 73
           E EW++ + V   L QL   L ECS                 K+ L+S   +++K IV  
Sbjct: 1   ELEWLLEEIVKPELPQLIEGLEECSALLAP-------SGPGFKLPLSSGRSESVKGIVTR 53

Query: 74  NGDSISFADIHLKIHRHHQHQTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDG 133
            G  I+  D+ LK+ R ++         +  + PWKL QIQDA NHL  AL  +DN+   
Sbjct: 54  QGTYITQFDVQLKLPRFNK---GQLTFKMNPDKPWKLQQIQDARNHLNQALDLLDNLQSS 110

Query: 134 Y----QFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTIDDLMKSRNMKSLTPPLPEDLA 189
           Y     F ++  +L  L  +L  LQ  R SL  P    + + +      S  PPLP DL+
Sbjct: 111 YDPLEFFATAAFLLEQLRLLLLTLQEARNSLQFPSDNNLWEPLMFDPSTSFCPPLPPDLS 170

Query: 190 ISFYIQSHKLICAAYQLSNVQ 210
           +  YI  ++L      L  V 
Sbjct: 171 VDLYISKNELCLDLRNLHKVT 191


This is a family of conserved proteins which have been suggested as containing leucine-zipper domains. A leucine zipper domain is a region of 30 amino acids with leucines repeating every seven or eight residues; these proteins do have many such leucines. The protein in Drosophila comes from the gene ROGDI. Length = 274

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 211
PF10259273 Rogdi_lz: Rogdi leucine zipper containing protein 100.0
KOG3992|consensus314 100.0
>PF10259 Rogdi_lz: Rogdi leucine zipper containing protein Back     alignment and domain information
Probab=100.00  E-value=3.6e-52  Score=367.46  Aligned_cols=185  Identities=37%  Similarity=0.602  Sum_probs=173.7

Q ss_pred             hhchhhhhhhHHHHHHHHHHHHHHhhhCCCccCCCCCCCCCceeeeccC-CCceeEEEEeecCeeeeeEEEEEeeccCCC
Q psy17045         15 EFEWVINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILASS-QDTLKTIVNLNGDSISFADIHLKIHRHHQH   93 (211)
Q Consensus        15 E~~WLl~~ev~~vl~~l~~~L~~c~~~l~~~~~~~~~~~~~eklvlss~-se~vKGvvtr~G~~I~~~di~lK~~~~~~~   93 (211)
                      |++||+++||+++|++|+++|++|+++|+    +++   +++|||||++ +|+|||+|||+|++|++|||++|+++++  
T Consensus         1 El~Wll~~~v~~~l~~l~~~L~~C~~lL~----~~~---~~~kl~lSs~~se~vKGvvTr~G~~Iv~~~i~lk~~~~~--   71 (273)
T PF10259_consen    1 ELEWLLEEEVKPVLPQLIDGLEECLALLA----PSD---PGSKLVLSSPRSESVKGVVTRVGDRIVKGDITLKLPKFN--   71 (273)
T ss_pred             CcchHHhhhhHHHHHHHHHHHHHHHHhhC----CCC---CCceEEeccCCCCceEEEEEEeCCeEEeeEEEEEecCCC--
Confidence            89999999999999999999999999995    222   3689999996 7999999999999999999999999993  


Q ss_pred             CCceEEEEecCCCceehhHHHHHHHHHHHHHhccccCCCCc----cccchHHHHHHHHHHHHHHHHhhhhccCCCCCCcc
Q psy17045         94 QTQTYKTSILKEHPWKLHQIQDAGNHLQFALYHIDNVDDGY----QFKSSEEVLHTLDNILNCLQRGRTSLIVPRKRTID  169 (211)
Q Consensus        94 ~~~~~r~~i~~~~pw~LqQiq~~~n~l~~al~~l~~l~~~~----~f~~~~ev~~~l~~ll~~L~~Ar~~L~~P~~~~l~  169 (211)
                       ++ ++++++++.||+|+|||+++||+++|+++|+.+...+    .+++++++++.|+.++++|++||++|++|++++++
T Consensus        72 -~~-~~~~~~~~~p~~L~Qi~~~~n~l~~al~~L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~L~~ar~~L~~P~~~~~~  149 (273)
T PF10259_consen   72 -KG-QRLKINPDKPWKLQQIQDARNHLNQALDLLDDLQSIYDPEEFFKDANELLSQLRNLMNSLQEARNSLKLPSDPNLW  149 (273)
T ss_pred             -Cc-eEEEECCCCCeehHHHHHHHHHHHHHHHHHHhhhhccccccccccHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcc
Confidence             33 7888999999999999999999999999999887655    78999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCCCeEEEEEeecceeEEEEeeccccC
Q psy17045        170 DLMKSRNMKSLTPPLPEDLAISFYIQSHKLICAAYQLSNVQ  210 (211)
Q Consensus       170 e~~~s~~~~~F~P~LP~dl~v~fyI~~~~Lv~~~y~l~~~~  210 (211)
                      +.+++.++++|.||||+|++|+|||++|+||+++|+|++.+
T Consensus       150 ~~~~~~~~~~F~P~Lp~~ls~~~~I~~~~Lvl~~~~L~~~~  190 (273)
T PF10259_consen  150 EPQSSPPSHSFCPPLPPDLSFDFYIQDNELVLDLRQLEPVT  190 (273)
T ss_pred             ccccCCcccccCCCCCcceEEEEEEecceeeeeeeeeEEcc
Confidence            99999999999999999999999999999999999999876



>KOG3992|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 2e-05
 Identities = 32/228 (14%), Positives = 73/228 (32%), Gaps = 40/228 (17%)

Query: 4   VEKEEALCLQKEFEW--VINKEVHIILKQLQTILVECSRRFPLTLFGNEGPYKSDKIILA 61
           +   E    +K F+   V     HI        ++       L+L   +       +++ 
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHI------PTIL-------LSLIWFDVIKSDVMVVVN 409

Query: 62  SSQDTLKTIVNLNGD--SISFADIHLKIHRHHQHQTQTYKTSI------LKEHPWKLHQI 113
                  ++V       +IS   I+L++    +++   +++ +             L   
Sbjct: 410 KLHK--YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467

Query: 114 QDAGNHLQFALYHIDNVDDGYQFKSSEEVLHTLDNILNCLQ---RGRTSLIVPRKRTIDD 170
                      +H+ N++   +      V   LD     L+   R  ++        ++ 
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVF--LD--FRFLEQKIRHDSTAWNASGSILNT 523

Query: 171 LMKSRNMKS-LTP--PLPEDLA---ISFYIQ-SHKLICAAYQLSNVQI 211
           L + +  K  +    P  E L    + F  +    LIC+ Y    ++I
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKY-TDLLRI 570


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00