Psyllid ID: psy17083

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60
Protein Sequence
MSNRLGRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQGH
Secondary Structure (PSIPRED)
ccccccccccccEEccccccccccccccccccccccEEcccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEccccccccccccccccccccccccccccEEEEEcccccccEccccc
Coil and Loop (DISEMBL)
msnrlgrnirasvqcrpgwrgefcdqckpypgckhgycngsswqcicdtnwggilcdqgh
Flexible Loop (DISEMBL)
msnrlgrnirasvqcrpgwrgefCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQGH
Low Complexity Region (SEG)
MSNRLGRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQGH
Disordered region (IsUnstruct)
********IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILC****
Disordered Region (DISOPRED)
*****GR*IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ**
Disordered Region (DISEMBL)
MSNRLGRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQGH
Disordered Region (DISPRO)
*****GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCD***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSNRLGRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQGH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	60	2.2.26 [Sep-21-2011]
P18168	1404	Protein serrate OS=Drosop	yes	N/A	0.75	0.032	0.755	1e-16
Q90Y57	1242	Protein jagged-1a OS=Dani	yes	N/A	0.816	0.039	0.58	2e-10
Q9Y219	1238	Protein jagged-2 OS=Homo	no	N/A	0.866	0.042	0.547	5e-10
P78504	1218	Protein jagged-1 OS=Homo	no	N/A	0.733	0.036	0.6	8e-10
Q9QXX0	1218	Protein jagged-1 OS=Mus m	yes	N/A	0.733	0.036	0.6	9e-10
Q9QYE5	1247	Protein jagged-2 OS=Mus m	no	N/A	0.866	0.041	0.528	9e-10
P97607	1202	Protein jagged-2 (Fragmen	yes	N/A	0.866	0.043	0.528	9e-10
Q63722	1219	Protein jagged-1 OS=Rattu	no	N/A	0.733	0.036	0.6	9e-10
Q9NR61	685	Delta-like protein 4 OS=H	no	N/A	0.783	0.068	0.541	1e-09
Q90Y54	1213	Protein jagged-1b OS=Dani	no	N/A	0.733	0.036	0.6	2e-09

>sp|P18168|SERR_DROME Protein serrate OS=Drosophila melanogaster GN=Ser PE=1 SV=3

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 34/45 (75%), Positives = 40/45 (88%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +CRPGWRG  C++C  YPGCKHG CNGS+W+C+CDTNWGGILCDQ
Sbjct: 302 ECRPGWRGPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQ 346

Acts as a ligand for Notch (N) receptor. Essential for proper ectodermal development. Serrate represents an element in a network of interacting molecules operating at the cell surface during the differentiation of certain tissues.
Drosophila melanogaster (taxid: 7227)

>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)

Query: 9   IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +  + +C  GW+GE+CDQC P+PGC HG C    WQC+CDTNWGG LCD+
Sbjct: 248 VPGNCRCLYGWQGEYCDQCIPHPGCVHGTCI-EPWQCLCDTNWGGQLCDK 296

Ligand for multiple Notch receptors and involved in the mediation of Notch signaling (By similarity). Seems to be involved in cell-fate decisions.

Danio rerio (taxid: 7955)

>sp|Q9Y219|JAG2_HUMAN Protein jagged-2 OS=Homo sapiens GN=JAG2 PE=1 SV=3

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 6   GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           G  +    +C  GW+G FCD+C PYPGC HG C    WQC C+TNWGG+LCD+
Sbjct: 255 GCTVPGECRCSYGWQGRFCDECVPYPGCVHGSCV-EPWQCNCETNWGGLLCDK 306

Putative Notch ligand involved in the mediation of Notch signaling. Involved in limb development.

Homo sapiens (taxid: 9606)

>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDK 295

Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation (By similarity). Enhances fibroblast growth factor-induced angiogenesis (in vitro).

Homo sapiens (taxid: 9606)

>sp|Q9QXX0|JAG1_MOUSE Protein jagged-1 OS=Mus musculus GN=Jag1 PE=1 SV=1

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGTCN-EPWQCLCETNWGGQLCDK 295

Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation (By similarity). May regulate fibroblast growth factor-induced angiogenesis.

Mus musculus (taxid: 10090)

>sp|Q9QYE5|JAG2_MOUSE Protein jagged-2 OS=Mus musculus GN=Jag2 PE=2 SV=2

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 6   GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           G  +    +C  GW+G+FCD+C PYPGC HG C    W C C+TNWGG+LCD+
Sbjct: 255 GCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCV-EPWHCDCETNWGGLLCDK 306

Putative Notch ligand involved in the mediation of Notch signaling. Plays an essential role during limb, craniofacial and thymic development. May be involved in myogenesis and in the development of peripheral and central nervous systems.

Mus musculus (taxid: 10090)

>sp|P97607|JAG2_RAT Protein jagged-2 (Fragment) OS=Rattus norvegicus GN=Jag2 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 6   GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           G  +    +C  GW+G+FCD+C PYPGC HG C    W C C+TNWGG+LCD+
Sbjct: 209 GCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCV-EPWHCDCETNWGGLLCDK 260

Putative Notch ligand involved in the mediation of Notch signaling. May have a role in neurogenesis in the peripheral nervous system, limb development and in the adult brain.

Rattus norvegicus (taxid: 10116)

>sp|Q63722|JAG1_RAT Protein jagged-1 OS=Rattus norvegicus GN=Jag1 PE=1 SV=2

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 252 RCQYGWQGLYCDKCIPHPGCVHGTCN-EPWQCLCETNWGGQLCDK 295

Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Enhances fibroblast growth factor-induced angiogenesis (in vitro). Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation. May regulate fibroblast growth factor-induced angiogenesis.

Rattus norvegicus (taxid: 10116)

>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 11  ASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           A   CRPGW+G  C++C P+ GC+HG C+ + WQC CD  WGG+ CDQ
Sbjct: 237 AECLCRPGWQGRLCNECIPHNGCRHGTCS-TPWQCTCDEGWGGLFCDQ 283

Plays a role in the Notch signaling pathway. Activates Notch-1 and Notch-4.

Homo sapiens (taxid: 9606)

>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C  GW+G +CD+C P+PGC HG C    WQC+CDTNWGG LCD+
Sbjct: 249 KCLYGWQGPYCDKCIPHPGCVHGTC-VEPWQCLCDTNWGGQLCDK 292

Ligand for Notch receptors and involved in the mediation of Notch signaling (By similarity). Seems to be involved in cell-fate decisions.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
270010674	1246	hypothetical protein TcasGA2_TC010113 [T	0.733	0.035	0.931	2e-18
332020153	1189	Protein jagged-1 [Acromyrmex echinatior]	0.85	0.042	0.843	2e-18
189239617	1303	PREDICTED: serrate [Tribolium castaneum]	0.75	0.034	0.911	2e-18
328784937	1203	PREDICTED: protein jagged-1 [Apis mellif	0.85	0.042	0.823	2e-18
350422307	1205	PREDICTED: protein jagged-1-like [Bombus	0.85	0.042	0.823	2e-18
383859516	1215	PREDICTED: protein jagged-1b-like [Megac	0.85	0.041	0.823	2e-18
340714233	1205	PREDICTED: protein jagged-1-like [Bombus	0.85	0.042	0.823	2e-18
380026105	1203	PREDICTED: LOW QUALITY PROTEIN: protein	0.85	0.042	0.823	2e-18
345489855	1181	PREDICTED: protein jagged-1b [Nasonia vi	0.85	0.043	0.823	3e-18
242017193	1214	Jagged-2 precursor, putative [Pediculus	0.733	0.036	0.909	2e-17

>gi|270010674|gb|EFA07122.1| hypothetical protein TcasGA2_TC010113 [Tribolium castaneum]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 44/44 (100%)

Query: 15  CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           CRPGWRG+FC+QC+PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 224 CRPGWRGDFCEQCEPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 267

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020153|gb|EGI60597.1| Protein jagged-1 [Acromyrmex echinatior]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    QCR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 212 NVSGECQCRHGWRGELCDQCMPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 262

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189239617|ref|XP_969486.2| PREDICTED: serrate [Tribolium castaneum]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/45 (91%), Positives = 44/45 (97%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
            CRPGWRG+FC+QC+PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 241 NCRPGWRGDFCEQCEPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 285

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328784937|ref|XP_394560.2| PREDICTED: protein jagged-1 [Apis mellifera]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 228 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 278

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422307|ref|XP_003493123.1| PREDICTED: protein jagged-1-like [Bombus impatiens]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 228 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 278

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859516|ref|XP_003705240.1| PREDICTED: protein jagged-1b-like [Megachile rotundata]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 268 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 318

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714233|ref|XP_003395635.1| PREDICTED: protein jagged-1-like [Bombus terrestris]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 228 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 278

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026105|ref|XP_003696800.1| PREDICTED: LOW QUALITY PROTEIN: protein jagged-1-like [Apis florea]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 228 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 278

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345489855|ref|XP_001601286.2| PREDICTED: protein jagged-1b [Nasonia vitripennis]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 44/51 (86%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           N+    +CR GWRGE CDQC PYPGCKHGYCNGSSWQCICDTNWGGILCDQ
Sbjct: 261 NVSGECKCRHGWRGELCDQCTPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 311

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017193|ref|XP_002429076.1| Jagged-2 precursor, putative [Pediculus humanus corporis] gi|212513940|gb|EEB16338.1| Jagged-2 precursor, putative [Pediculus humanus corporis]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/44 (90%), Positives = 41/44 (93%)

Query: 15  CRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           CR GWRGEFCDQC PYPGCKHGYCNG+ WQCICDTNWGGILCDQ
Sbjct: 122 CRLGWRGEFCDQCSPYPGCKHGYCNGTPWQCICDTNWGGILCDQ 165

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
FB|FBgn0004197	1404	Ser "Serrate" [Drosophila mela	0.75	0.032	0.755	6.9e-19
UNIPROTKB|F1NND2	143	JAG2 "Uncharacterized protein"	0.866	0.363	0.509	4.2e-15
UNIPROTKB|Q9Y219	1238	JAG2 "Protein jagged-2" [Homo	0.866	0.042	0.547	6e-14
ZFIN|ZDB-GENE-011128-2	1253	jag1a "jagged 1a" [Danio rerio	0.816	0.039	0.58	6.1e-14
UNIPROTKB|G3X6N5	1081	JAG2 "Delta-like protein" [Bos	0.866	0.048	0.528	8.2e-14
UNIPROTKB|F1NMD6	1149	JAG2 "Delta-like protein" [Gal	0.866	0.045	0.509	1.1e-13
UNIPROTKB|F1NSD2	1211	JAG2 "Delta-like protein" [Gal	0.866	0.042	0.509	1.2e-13
UNIPROTKB|B4DYR1	1059	JAG1 "Delta-like protein" [Hom	0.733	0.041	0.6	1.3e-13
UNIPROTKB|F1PRK6	1092	JAG2 "Delta-like protein" [Can	0.866	0.047	0.528	1.4e-13
UNIPROTKB|F1M9G2	1199	Jag2 "Delta-like protein" [Rat	0.866	0.043	0.528	1.5e-13

FB|FBgn0004197 Ser "Serrate" [Drosophila melanogaster (taxid:7227)]

 Score = 241 (89.9 bits), Expect = 6.9e-19, P = 6.9e-19
 Identities = 34/45 (75%), Positives = 40/45 (88%)

Query:    14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             +CRPGWRG  C++C  YPGCKHG CNGS+W+C+CDTNWGGILCDQ
Sbjct:   302 ECRPGWRGPLCNECMVYPGCKHGSCNGSAWKCVCDTNWGGILCDQ 346

GO:0005886 "plasma membrane" evidence=IDA

GO:0030673 "axolemma" evidence=IDA

GO:0005154 "epidermal growth factor receptor binding" evidence=NAS

GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0007219 "Notch signaling pathway" evidence=IMP;NAS

GO:0005112 "Notch binding" evidence=NAS;TAS;IPI

GO:0048749 "compound eye development" evidence=IMP;TAS

GO:0007435 "salivary gland morphogenesis" evidence=IMP;NAS

GO:0007451 "dorsal/ventral lineage restriction, imaginal disc" evidence=TAS

GO:0042688 "crystal cell differentiation" evidence=IMP;TAS

GO:0035167 "larval lymph gland hemopoiesis" evidence=IEP

GO:0042689 "regulation of crystal cell differentiation" evidence=TAS

GO:0005102 "receptor binding" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0007431 "salivary gland development" evidence=NAS

GO:0007436 "larval salivary gland morphogenesis" evidence=IMP

GO:0035170 "lymph gland crystal cell differentiation" evidence=TAS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

GO:0007423 "sensory organ development" evidence=IMP

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0035214 "eye-antennal disc development" evidence=IMP

GO:0030718 "germ-line stem cell maintenance" evidence=IGI

GO:0009986 "cell surface" evidence=IDA

UNIPROTKB|F1NND2 JAG2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G ++    +C  GW+G++CD+C  YPGC HG CN   WQC C+TNWGG+LC++
Sbjct:    37 GCSVPGECKCHYGWQGQYCDECVRYPGCAHGSCN-EPWQCNCETNWGGLLCNK 88

GO:0005509 "calcium ion binding" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0008083 "growth factor activity" evidence=IEA

GO:0009912 "auditory receptor cell fate commitment" evidence=IEA

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042492 "gamma-delta T cell differentiation" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0045061 "thymic T cell selection" evidence=IEA

UNIPROTKB|Q9Y219 JAG2 "Protein jagged-2" [Homo sapiens (taxid:9606)]

 Score = 194 (73.4 bits), Expect = 6.0e-14, P = 6.0e-14
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G  +    +C  GW+G FCD+C PYPGC HG C    WQC C+TNWGG+LCD+
Sbjct:   255 GCTVPGECRCSYGWQGRFCDECVPYPGCVHGSCV-EPWQCNCETNWGGLLCDK 306

GO:0005509 "calcium ion binding" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042492 "gamma-delta T cell differentiation" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IDA

GO:0030154 "cell differentiation" evidence=IDA

GO:0005112 "Notch binding" evidence=IPI

GO:0007219 "Notch signaling pathway" evidence=NAS;TAS

GO:0030334 "regulation of cell migration" evidence=NAS

GO:0008083 "growth factor activity" evidence=IDA

GO:0030217 "T cell differentiation" evidence=IDA

GO:0045061 "thymic T cell selection" evidence=IDA

GO:0007283 "spermatogenesis" evidence=IEP

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0009912 "auditory receptor cell fate commitment" evidence=ISS

GO:0007049 "cell cycle" evidence=NAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007220 "Notch receptor processing" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-011128-2 jag1a "jagged 1a" [Danio rerio (taxid:7955)]

 Score = 194 (73.4 bits), Expect = 6.1e-14, P = 6.1e-14
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query:     9 IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             +  + +C  GW+GE+CDQC P+PGC HG C    WQC+CDTNWGG LCD+
Sbjct:   248 VPGNCRCLYGWQGEYCDQCIPHPGCVHGTCI-EPWQCLCDTNWGGQLCDK 296

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0005112 "Notch binding" evidence=IEA

GO:0007154 "cell communication" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030878 "thyroid gland development" evidence=IMP

UNIPROTKB|G3X6N5 JAG2 "Delta-like protein" [Bos taurus (taxid:9913)]

 Score = 192 (72.6 bits), Expect = 8.2e-14, P = 8.2e-14
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G ++    +C  GW+G FCD+C PYPGC HG C    WQC C+TNWGG+LC++
Sbjct:    97 GCSVPGECRCSYGWQGRFCDECVPYPGCVHGSCV-EPWQCTCETNWGGLLCNK 148

GO:0045061 "thymic T cell selection" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0042492 "gamma-delta T cell differentiation" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA

GO:0009912 "auditory receptor cell fate commitment" evidence=IEA

GO:0008083 "growth factor activity" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NMD6 JAG2 "Delta-like protein" [Gallus gallus (taxid:9031)]

 Score = 191 (72.3 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G ++    +C  GW+G++CD+C  YPGC HG CN   WQC C+TNWGG+LC++
Sbjct:   255 GCSVPGECKCHYGWQGQYCDECVRYPGCAHGSCN-EPWQCNCETNWGGLLCNK 306

GO:0005112 "Notch binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NSD2 JAG2 "Delta-like protein" [Gallus gallus (taxid:9031)]

 Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G ++    +C  GW+G++CD+C  YPGC HG CN   WQC C+TNWGG+LC++
Sbjct:   224 GCSVPGECKCHYGWQGQYCDECVRYPGCAHGSCN-EPWQCNCETNWGGLLCNK 275

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0008083 "growth factor activity" evidence=IEA

GO:0009912 "auditory receptor cell fate commitment" evidence=IEA

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042492 "gamma-delta T cell differentiation" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0045061 "thymic T cell selection" evidence=IEA

UNIPROTKB|B4DYR1 JAG1 "Delta-like protein" [Homo sapiens (taxid:9606)]

 Score = 190 (71.9 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 27/45 (60%), Positives = 36/45 (80%)

Query:    14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct:    93 RCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDK 136

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002011 "morphogenesis of an epithelial sheet" evidence=IEA

GO:0003215 "cardiac right ventricle morphogenesis" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0032495 "response to muramyl dipeptide" evidence=IEA

GO:0035909 "aorta morphogenesis" evidence=IEA

GO:0042491 "auditory receptor cell differentiation" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0045599 "negative regulation of fat cell differentiation" evidence=IEA

GO:0045639 "positive regulation of myeloid cell differentiation" evidence=IEA

GO:0045665 "negative regulation of neuron differentiation" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0060411 "cardiac septum morphogenesis" evidence=IEA

GO:0061309 "cardiac neural crest cell development involved in outflow tract morphogenesis" evidence=IEA

GO:0061314 "Notch signaling involved in heart development" evidence=IEA

GO:0061444 "endocardial cushion cell development" evidence=IEA

GO:0072017 "distal tubule development" evidence=IEA

GO:0072070 "loop of Henle development" evidence=IEA

UNIPROTKB|F1PRK6 JAG2 "Delta-like protein" [Canis lupus familiaris (taxid:9615)]

 Score = 190 (71.9 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G ++    +C  GW+G FCD+C PYPGC HG C    WQC C+TNWGG+LC++
Sbjct:   116 GCSVPGECKCSYGWQGRFCDECVPYPGCVHGSCV-DPWQCNCETNWGGLLCNK 167

GO:0045061 "thymic T cell selection" evidence=IEA

GO:0042981 "regulation of apoptotic process" evidence=IEA

GO:0042492 "gamma-delta T cell differentiation" evidence=IEA

GO:0042475 "odontogenesis of dentin-containing tooth" evidence=IEA

GO:0042127 "regulation of cell proliferation" evidence=IEA

GO:0030155 "regulation of cell adhesion" evidence=IEA

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA

GO:0009912 "auditory receptor cell fate commitment" evidence=IEA

GO:0008083 "growth factor activity" evidence=IEA

GO:0007283 "spermatogenesis" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001501 "skeletal system development" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1M9G2 Jag2 "Delta-like protein" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query:     6 GRNIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
             G  +    +C  GW+G+FCD+C PYPGC HG C    W C C+TNWGG+LCD+
Sbjct:   209 GCTVPGECRCSYGWQGKFCDECVPYPGCVHGSCV-EPWHCDCETNWGGLLCDK 260

GO:0005112 "Notch binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P97607	JAG2_RAT	No assigned EC number	0.5283	0.8666	0.0432	yes	N/A
Q90Y57	JAG1A_DANRE	No assigned EC number	0.58	0.8166	0.0394	yes	N/A
Q9QXX0	JAG1_MOUSE	No assigned EC number	0.6	0.7333	0.0361	yes	N/A
P18168	SERR_DROME	No assigned EC number	0.7555	0.75	0.0320	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	60
KOG4289|consensus	2531		98.86
KOG1225|consensus	525		98.62
KOG1219|consensus	4289		98.58
KOG1225|consensus	525		98.57
KOG1226|consensus	783		98.29
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	98.07
smart00051	63	DSL delta serrate ligand.	98.07
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	98.01
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.91
KOG1226|consensus	783		97.85
KOG4289|consensus	2531		97.77
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	97.76
KOG1219|consensus	4289		97.62
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.41
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.13
smart00181	35	EGF Epidermal growth factor-like domain.	97.12
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	97.04
KOG4260|consensus	350		97.02
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.82
KOG0994|consensus	1758		96.67
KOG1214|consensus	1289		96.55
PHA02887	126	EGF-like protein; Provisional	96.51
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	96.31
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	96.3
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	96.14
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	96.12
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	95.84
KOG1217|consensus	487		94.64
KOG0994|consensus	1758		94.26
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	94.16
KOG1217|consensus	487		94.15
PF12662	24	cEGF: Complement Clr-like EGF-like	92.84
PHA02887	126	EGF-like protein; Provisional	92.69
KOG4260|consensus	350		90.89
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	90.34
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	87.34
KOG1836|consensus	1705		86.85
KOG3607|consensus	716		85.32
KOG3516|consensus	1306		85.25
KOG1836|consensus	1705		84.51
KOG1218|consensus	316		84.26
PF12955	103	DUF3844: Domain of unknown function (DUF3844); Int	84.06
KOG3607|consensus	716		80.91

>KOG4289|consensus

Probab=98.86  E-value=3.1e-09  Score=72.64  Aligned_cols=50  Identities=28%  Similarity=0.909  Sum_probs=44.2

Q ss_pred             CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083          9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      +...|.|++||+|.+|+    .|...| |. +|+|..  +.|+|.|.++|+|..|+.+
T Consensus      1220 nglrCrCPpGFTgd~CeTeiDlCYs~p-C~nng~C~srEggYtCeCrpg~tGehCEvs 1276 (2531)
T KOG4289|consen 1220 NGLRCRCPPGFTGDYCETEIDLCYSGP-CGNNGRCRSREGGYTCECRPGFTGEHCEVS 1276 (2531)
T ss_pred             CceeEeCCCCCCcccccchhHhhhcCC-CCCCCceEEecCceeEEecCCccccceeee
Confidence            45689999999999997    488888 98 689986  8899999999999999875

>KOG1225|consensus

Probab=98.62  E-value=7.5e-08  Score=60.77  Aligned_cols=21  Identities=33%  Similarity=0.937  Sum_probs=13.7

Q ss_pred             CccCCCeeEcCCCCcCCCCCC
Q psy17083          6 GRNIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         6 g~~~~~~C~C~~g~~g~~C~~   26 (60)
                      |.++.++|+|++||+|.+|++
T Consensus       260 g~c~~G~CIC~~Gf~G~dC~e  280 (525)
T KOG1225|consen  260 GQCVEGRCICPPGFTGDDCDE  280 (525)
T ss_pred             ceEeCCeEeCCCCCcCCCCCc
Confidence            456666666666666666654

>KOG1219|consensus

Probab=98.58  E-value=7.7e-08  Score=68.28  Aligned_cols=50  Identities=24%  Similarity=0.725  Sum_probs=44.1

Q ss_pred             CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083          9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      ..|.|.|++.|.|.+|+    .|..+| |. .|+|++  +.+.|.|+.+|+|..|+.+
T Consensus      3884 ggy~CkCpsqysG~~CEi~~epC~snP-C~~GgtCip~~n~f~CnC~~gyTG~~Ce~~ 3940 (4289)
T KOG1219|consen 3884 GGYKCKCPSQYSGNHCEIDLEPCASNP-CLTGGTCIPFYNGFLCNCPNGYTGKRCEAR 3940 (4289)
T ss_pred             CceEEeCcccccCcccccccccccCCC-CCCCCEEEecCCCeeEeCCCCccCceeecc
Confidence            45899999999999997    388899 98 579997  7799999999999999864

>KOG1225|consensus

Probab=98.57  E-value=1.7e-07  Score=59.23  Aligned_cols=54  Identities=31%  Similarity=0.732  Sum_probs=44.9

Q ss_pred             CCCCccCCCeeEcCCCCcCCCCCCCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083          3 NRLGRNIRASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         3 ~~~g~~~~~~C~C~~g~~g~~C~~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      +.|+....++|.|.++|.|..|+.-.....|. +|.|++  ++|.|.+||+|..|.+
T Consensus       288 s~~g~~~~g~CiC~~g~~G~dCs~~~cpadC~g~G~Ci~--G~C~C~~Gy~G~~C~~  342 (525)
T KOG1225|consen  288 SGGGVCVDGECICNPGYSGKDCSIRRCPADCSGHGKCID--GECLCDEGYTGELCIQ  342 (525)
T ss_pred             CCCceecCCEeecCCCccccccccccCCccCCCCCcccC--CceEeCCCCcCCcccc
Confidence            57788888999999999999997533333487 689994  8999999999999975

>KOG1226|consensus

Probab=98.29  E-value=1.7e-06  Score=56.50  Aligned_cols=57  Identities=26%  Similarity=0.702  Sum_probs=41.3

Q ss_pred             CCCCCCccCCCeeEcCCCCcCCCCCCCCCCCC--------CC-CCeEEcCCCeEEeCCC-cccCCCCcC
Q psy17083          1 MSNRLGRNIRASVQCRPGWRGEFCDQCKPYPG--------CK-HGYCNGSSWQCICDTN-WGGILCDQG   59 (60)
Q Consensus         1 ~~~~~g~~~~~~C~C~~g~~g~~C~~c~~~~~--------C~-~g~C~~~~~~C~C~~g-~~G~~C~~~   59 (60)
                      ++++||.+.-+.|+|.+||+|..|+--.....        |. +|+|.-  ++|.|... |.|..|+..
T Consensus       556 lC~g~G~C~CG~CvC~~GwtG~~C~C~~std~C~~~~G~iCSGrG~C~C--g~C~C~~~~~sG~~CE~c  622 (783)
T KOG1226|consen  556 LCGGHGRCECGRCVCNPGWTGSACNCPLSTDTCESSDGQICSGRGTCEC--GRCKCTDPPYSGEFCEKC  622 (783)
T ss_pred             ccCCCCeEeCCcEEcCCCCccCCCCCCCCCccccCCCCceeCCCceeeC--CceEcCCCCcCcchhhcC
Confidence            46789999999999999999999952112222        43 355553  67888775 999999753

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=98.07  E-value=4.3e-06  Score=34.73  Aligned_cols=22  Identities=23%  Similarity=0.569  Sum_probs=11.4

Q ss_pred             CCCCccC--CCeeEcCCCCcCCCC
Q psy17083          3 NRLGRNI--RASVQCRPGWRGEFC   24 (60)
Q Consensus         3 ~~~g~~~--~~~C~C~~g~~g~~C   24 (60)
                      +.||.++  .++|+|++||+|+.|
T Consensus         9 ~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    9 SGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             CCCCEEeCCCCEEECCCCCcCCCC
Confidence            4455544  355555555555543

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>smart00051 DSL delta serrate ligand

Probab=98.07  E-value=6.9e-06  Score=38.93  Aligned_cols=45  Identities=29%  Similarity=0.664  Sum_probs=33.2

Q ss_pred             CeeEcCCCCcCCCCCC-CCCCCCCC-CCeEEcCCCeEEeCCCcccCCC
Q psy17083         11 ASVQCRPGWRGEFCDQ-CKPYPGCK-HGYCNGSSWQCICDTNWGGILC   56 (60)
Q Consensus        11 ~~C~C~~g~~g~~C~~-c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C   56 (60)
                      +.-.|+++|.|..|+. |.+..... +.+|. ..+.+.|.+||.|+.|
T Consensus        17 ~rv~C~~~~yG~~C~~~C~~~~d~~~~~~Cd-~~G~~~C~~Gw~G~~C   63 (63)
T smart00051       17 IRVTCDENYYGEGCNKFCRPRDDFFGHYTCD-ENGNKGCLEGWMGPYC   63 (63)
T ss_pred             EEeeCCCCCcCCccCCEeCcCccccCCccCC-cCCCEecCCCCcCCCC
Confidence            4557999999999974 55432233 45776 4688999999999886

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=98.01  E-value=2.9e-06  Score=28.63  Aligned_cols=12  Identities=58%  Similarity=1.553  Sum_probs=6.1

Q ss_pred             eEcCCCCcCCCC
Q psy17083         13 VQCRPGWRGEFC   24 (60)
Q Consensus        13 C~C~~g~~g~~C   24 (60)
                      |+|++||+|.+|
T Consensus         2 C~C~~G~~G~~C   13 (13)
T PF12661_consen    2 CQCPPGWTGPNC   13 (13)
T ss_dssp             EEE-TTEETTTT
T ss_pred             ccCcCCCcCCCC
Confidence            555555555544

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.91  E-value=1e-05  Score=33.43  Aligned_cols=28  Identities=29%  Similarity=0.907  Sum_probs=21.4

Q ss_pred             CCCCCCCCC-CeEEc---CCCeEEeCCCcccCC
Q psy17083         27 CKPYPGCKH-GYCNG---SSWQCICDTNWGGIL   55 (60)
Q Consensus        27 c~~~~~C~~-g~C~~---~~~~C~C~~g~~G~~   55 (60)
                      |...| |.+ |+|++   ..+.|.|++||+|+.
T Consensus         1 C~~~~-C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    1 CSSNP-CQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             TTTTS-STTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             CCCCc-CCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            34456 885 78986   568999999999964

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>KOG1226|consensus

Probab=97.85  E-value=3.6e-05  Score=50.57  Aligned_cols=54  Identities=28%  Similarity=0.792  Sum_probs=41.3

Q ss_pred             CCCCCccCCCeeEcCCCCc----CCCCC----CCCCC--CCCC-CCeEEcCCCeEEeCCCcccCCCC
Q psy17083          2 SNRLGRNIRASVQCRPGWR----GEFCD----QCKPY--PGCK-HGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus         2 ~~~~g~~~~~~C~C~~g~~----g~~C~----~c~~~--~~C~-~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      ++++|.+.-++|.|.+...    |.+|+    .|...  ..|. +|+|.-  ++|+|.+||+|.+|+
T Consensus       516 CSgrG~C~CGqC~C~~~~~~~i~G~fCECDnfsC~r~~g~lC~g~G~C~C--G~CvC~~GwtG~~C~  580 (783)
T KOG1226|consen  516 CSGRGDCVCGQCVCHKPDNGKIYGKFCECDNFSCERHKGVLCGGHGRCEC--GRCVCNPGWTGSACN  580 (783)
T ss_pred             cCCCCcEeCCceEecCCCCCceeeeeeeccCcccccccCcccCCCCeEeC--CcEEcCCCCccCCCC
Confidence            5778889999999998877    88885    12221  1265 678874  899999999999986

>KOG4289|consensus

Probab=97.77  E-value=3.8e-05  Score=53.75  Aligned_cols=55  Identities=33%  Similarity=0.820  Sum_probs=41.1

Q ss_pred             CCCCc----cCCCeeEcCCCCcCCCCCC------CCCCCCCCC-CeEEc---CCCeEEeCCC-cccCCCCc
Q psy17083          3 NRLGR----NIRASVQCRPGWRGEFCDQ------CKPYPGCKH-GYCNG---SSWQCICDTN-WGGILCDQ   58 (60)
Q Consensus         3 ~~~g~----~~~~~C~C~~g~~g~~C~~------c~~~~~C~~-g~C~~---~~~~C~C~~g-~~G~~C~~   58 (60)
                      +.||.    ...|+|.|.++|+|.+|+.      |.+.- |++ |+|++   +.+.|.|+.| |.++.|+.
T Consensus      1248 ~nng~C~srEggYtCeCrpg~tGehCEvs~~agrCvpGv-C~nggtC~~~~nggf~c~Cp~ge~e~prC~v 1317 (2531)
T KOG4289|consen 1248 GNNGRCRSREGGYTCECRPGFTGEHCEVSARAGRCVPGV-CKNGGTCVNLLNGGFCCHCPYGEFEDPRCEV 1317 (2531)
T ss_pred             CCCCceEEecCceeEEecCCccccceeeecccCccccce-ecCCCEEeecCCCceeccCCCcccCCCceEE
Confidence            44555    4568999999999999973      55555 774 68886   6678899885 66777764

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.76  E-value=5e-05  Score=31.47  Aligned_cols=24  Identities=38%  Similarity=1.071  Sum_probs=20.4

Q ss_pred             CC-CCeEEcCCCeEEeCCCcccCCC
Q psy17083         33 CK-HGYCNGSSWQCICDTNWGGILC   56 (60)
Q Consensus        33 C~-~g~C~~~~~~C~C~~g~~G~~C   56 (60)
                      |. +|+|+...++|.|.++|+|+.|
T Consensus         8 C~~~G~C~~~~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    8 CSGHGTCVSPCGRCVCDSGYTGPDC   32 (32)
T ss_pred             cCCCCEEeCCCCEEECCCCCcCCCC
Confidence            76 7999954489999999999986

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>KOG1219|consensus

Probab=97.62  E-value=5.7e-05  Score=54.82  Aligned_cols=48  Identities=27%  Similarity=0.669  Sum_probs=40.4

Q ss_pred             CCCeeEcCCCCcCCCCCC-----CCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ-----CKPYPGCKH-GYCNG--SSWQCICDTNWGGILCD   57 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~-----c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~   57 (60)
                      +.+.|.|+.||+|.+|+.     |.-++ |.+ |.|++  +++.|.|.+++.|..|.
T Consensus      3922 n~f~CnC~~gyTG~~Ce~~Gi~eCs~n~-C~~gg~C~n~~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3922 NGFLCNCPNGYTGKRCEARGISECSKNV-CGTGGQCINIPGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred             CCeeEeCCCCccCceeeccccccccccc-ccCCceeeccCCceEeccChhHhcccCc
Confidence            457899999999999973     66667 874 68987  77899999999999874

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.41  E-value=0.00043  Score=28.88  Aligned_cols=25  Identities=32%  Similarity=0.969  Sum_probs=20.2

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcc-cCCCC
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWG-GILCD   57 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~-G~~C~   57 (60)
                      |. +++|++  +.+.|.|+.+|. |..|+
T Consensus        11 C~~~~~C~~~~g~~~C~C~~g~~~g~~C~   39 (39)
T smart00179       11 CQNGGTCVNTVGSYRCECPPGYTDGRNCE   39 (39)
T ss_pred             cCCCCEeECCCCCeEeECCCCCccCCcCC
Confidence            76 458886  678999999999 88874

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.13  E-value=0.0013  Score=26.92  Aligned_cols=25  Identities=32%  Similarity=0.980  Sum_probs=19.7

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcccCCCC
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWGGILCD   57 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~G~~C~   57 (60)
                      |. ++.|.+  +.+.|.|+.+|.|..|+
T Consensus        11 C~~~~~C~~~~~~~~C~C~~g~~g~~C~   38 (38)
T cd00054          11 CQNGGTCVNTVGSYRCSCPPGYTGRNCE   38 (38)
T ss_pred             cCCCCEeECCCCCeEeECCCCCcCCcCC
Confidence            66 457875  66889999999998774

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>smart00181 EGF Epidermal growth factor-like domain

Probab=97.12  E-value=0.0014  Score=26.84  Aligned_cols=25  Identities=32%  Similarity=0.983  Sum_probs=18.6

Q ss_pred             CCCCeEEc--CCCeEEeCCCccc-CCCC
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGG-ILCD   57 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G-~~C~   57 (60)
                      |.++.|++  +.+.|.|+.||.| ..|+
T Consensus         8 C~~~~C~~~~~~~~C~C~~g~~g~~~C~   35 (35)
T smart00181        8 CSNGTCINTPGSYTCSCPPGYTGDKRCE   35 (35)
T ss_pred             CCCCEEECCCCCeEeECCCCCccCCccC
Confidence            66447765  6788999999998 7663

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=97.04  E-value=0.00024  Score=33.67  Aligned_cols=47  Identities=32%  Similarity=0.702  Sum_probs=22.6

Q ss_pred             CCCeeEcCCCCcCCCCCC-CCCCCCCC-CCeEEcCCCeEEeCCCcccCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ-CKPYPGCK-HGYCNGSSWQCICDTNWGGILC   56 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~-c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C   56 (60)
                      ....-.|.+.|.|+.|+. |.+...-. +-+|. ..+.-+|.+||.|+.|
T Consensus        15 ~~~rv~C~~nyyG~~C~~~C~~~~d~~ghy~Cd-~~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   15 YRIRVVCDENYYGPNCSKFCKPRDDSFGHYTCD-SNGNKVCLPGWTGPNC   63 (63)
T ss_dssp             --------TTEETTTT-EE---EEETTEEEEE--SS--EEE-TTEESTTS
T ss_pred             EEEEEECCCCCCCccccCCcCCCcCCcCCcccC-CCCCCCCCCCCcCCCC
Confidence            345678999999999974 55432111 23677 4678889999999987

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>KOG4260|consensus

Probab=97.02  E-value=0.00083  Score=40.22  Aligned_cols=43  Identities=42%  Similarity=0.913  Sum_probs=34.6

Q ss_pred             EcCCCCcCCCCCCCCC---CCCCC-CCeEEc-----CCCeEEeCCCcccCCCC
Q psy17083         14 QCRPGWRGEFCDQCKP---YPGCK-HGYCNG-----SSWQCICDTNWGGILCD   57 (60)
Q Consensus        14 ~C~~g~~g~~C~~c~~---~~~C~-~g~C~~-----~~~~C~C~~g~~G~~C~   57 (60)
                      -|++|-+|+.|..|.-   .| |. +|.|..     +++.|.|.+||.|++|.
T Consensus       131 CCp~gtyGpdCl~Cpggser~-C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~  182 (350)
T KOG4260|consen  131 CCPDGTYGPDCLQCPGGSERP-CFGNGSCHGDGSREGSGKCKCETGYTGPLCR  182 (350)
T ss_pred             ccCCCCcCCccccCCCCCcCC-cCCCCcccCCCCCCCCCcccccCCCCCcccc
Confidence            4789999999988733   34 76 677764     67899999999999985

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.82  E-value=0.0033  Score=25.24  Aligned_cols=24  Identities=33%  Similarity=1.025  Sum_probs=18.8

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcccC-CC
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWGGI-LC   56 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~G~-~C   56 (60)
                      |. ++.|++  +.+.|.|+.||.|. .|
T Consensus         8 C~~~~~C~~~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           8 CSNGGTCVNTPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCEEecCCCCeEeECCCCCcccCCc
Confidence            65 467876  56899999999988 65

>KOG0994|consensus

Probab=96.67  E-value=0.0024  Score=44.48  Aligned_cols=50  Identities=38%  Similarity=1.028  Sum_probs=35.5

Q ss_pred             CCCeeEcCCCCcCCCCCCCCC----CC--CCC------CC----eEEcCCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQCKP----YP--GCK------HG----YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~----~~--~C~------~g----~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      .++.|+|.|||.|..|++|..    .|  .|.      .|    .|....+.|.|.+|..|..|++
T Consensus      1082 ftGQCqCkpGfGGR~C~qCqel~WGdP~~~C~aCdCd~rG~~tpQCdr~tG~C~C~~Gv~G~rCdq 1147 (1758)
T KOG0994|consen 1082 FTGQCQCKPGFGGRTCSQCQELYWGDPNEKCRACDCDPRGIETPQCDRATGRCVCRPGVGGPRCDQ 1147 (1758)
T ss_pred             cccceeccCCCCCcchhHHHHhhcCCCCCCceecCCCCCCCCCCCccccCCceeecCCCCCcchhh
Confidence            357999999999999986532    11  121      12    4555678999999999998864

>KOG1214|consensus

Probab=96.55  E-value=0.0042  Score=42.14  Aligned_cols=45  Identities=33%  Similarity=0.869  Sum_probs=33.5

Q ss_pred             CCCeeEcCCCCcCC--CC---CCCCCCCCCC-CCeEEc--CCCeEEeCCCcccC
Q psy17083          9 IRASVQCRPGWRGE--FC---DQCKPYPGCK-HGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus         9 ~~~~C~C~~g~~g~--~C---~~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      ..|.|.|-|||.|.  .|   ++|.+.. |- +..|.+  +++.|+|.+||.|.
T Consensus       807 s~y~C~CLPGfsGDG~~c~dvDeC~psr-Chp~A~CyntpgsfsC~C~pGy~GD  859 (1289)
T KOG1214|consen  807 STYSCACLPGFSGDGHQCTDVDECSPSR-CHPAATCYNTPGSFSCRCQPGYYGD  859 (1289)
T ss_pred             ceEEEeecCCccCCccccccccccCccc-cCCCceEecCCCcceeecccCccCC
Confidence            35799999999875  33   3565444 65 567876  78999999999874

>PHA02887 EGF-like protein; Provisional

Probab=96.51  E-value=0.0034  Score=33.18  Aligned_cols=26  Identities=38%  Similarity=0.997  Sum_probs=22.1

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |.||+|.-    ....|+|+.||+|..|+.
T Consensus        94 CiHG~C~yI~dL~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887         94 CINGECMNIIDLDEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             eeCCEEEccccCCCceeECCCCcccCCCCc
Confidence            77888864    567999999999999975

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=96.31  E-value=0.0059  Score=26.98  Aligned_cols=21  Identities=33%  Similarity=0.920  Sum_probs=17.8

Q ss_pred             CCCeeEcCCCCcCCCCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQCKP   29 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~   29 (60)
                      ..+.|.|+++|+|.+|+.|..
T Consensus        16 ~~G~C~C~~~~~G~~C~~C~~   36 (46)
T smart00180       16 DTGQCECKPNVTGRRCDRCAP   36 (46)
T ss_pred             CCCEEECCCCCCCCCCCcCCC
Confidence            468999999999999987654

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=96.30  E-value=0.006  Score=27.31  Aligned_cols=21  Identities=33%  Similarity=0.895  Sum_probs=18.1

Q ss_pred             CCCeeEcCCCCcCCCCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQCKP   29 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~   29 (60)
                      ..++|.|.++|.|..|++|..
T Consensus        17 ~~G~C~C~~~~~G~~C~~C~~   37 (50)
T cd00055          17 GTGQCECKPNTTGRRCDRCAP   37 (50)
T ss_pred             CCCEEeCCCcCCCCCCCCCCC
Confidence            468999999999999987754

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=96.14  E-value=0.002  Score=28.71  Aligned_cols=22  Identities=45%  Similarity=0.986  Sum_probs=17.1

Q ss_pred             cCCCeeEcCCCCcCCCCCCCCC
Q psy17083          8 NIRASVQCRPGWRGEFCDQCKP   29 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~~c~~   29 (60)
                      ...+.|.|.++|.|++|++|..
T Consensus        15 ~~~G~C~C~~~~~G~~C~~C~~   36 (49)
T PF00053_consen   15 PSTGQCVCKPGTTGPRCDQCKP   36 (49)
T ss_dssp             ETCEEESBSTTEESTTS-EE-T
T ss_pred             CCCCEEeccccccCCcCcCCCC
Confidence            3578999999999999988654

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=96.12  E-value=0.0057  Score=32.83  Aligned_cols=26  Identities=35%  Similarity=0.908  Sum_probs=22.0

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |.||.|.-    ....|+|..||+|..|+.
T Consensus        53 ClHG~C~yI~dl~~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         53 CLHGDCIHARDIDGMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             eECCEEEeeccCCCceeECCCCcccccccc
Confidence            77888863    668899999999999974

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=95.84  E-value=0.014  Score=25.10  Aligned_cols=20  Identities=30%  Similarity=0.961  Sum_probs=17.4

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcc
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~   52 (60)
                      |. ++.|++  ++|.|.|++||.
T Consensus        12 C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen   12 CPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSTTSEEEEETTEEEEEESTTEE
T ss_pred             CCCCCEEEcCCCCEEeeCCCCcE
Confidence            66 578987  889999999997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1217|consensus

Probab=94.64  E-value=0.095  Score=31.93  Aligned_cols=47  Identities=32%  Similarity=0.921  Sum_probs=35.8

Q ss_pred             CCeeEcCCCCcCCCC------CCCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCC
Q psy17083         10 RASVQCRPGWRGEFC------DQCKPYPGCK-HGYCNG--SSWQCICDTNWGGILC   56 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C------~~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C   56 (60)
                      .+.|.|++||.+..+      ++|.....|. +++|+.  ..+.|.|+++|.|..+
T Consensus       251 ~~~C~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  251 SYTCRCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             ceeeeCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCC
Confidence            368999999999873      3466553366 478986  3489999999999887

>KOG0994|consensus

Probab=94.26  E-value=0.066  Score=37.85  Aligned_cols=51  Identities=35%  Similarity=0.811  Sum_probs=37.4

Q ss_pred             cCCCeeEcCCCCcCCCCCCCCCCC-------C---CC-C----CeEEcCCCeEEeCCCcccCCCCc
Q psy17083          8 NIRASVQCRPGWRGEFCDQCKPYP-------G---CK-H----GYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~~c~~~~-------~---C~-~----g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..++.|.|-|...|..|+.|+.+.       .   |. +    .+|..-.++|.|.+||.|..|++
T Consensus      1034 r~tGQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~~pqCN~ftGQCqCkpGfGGR~C~q 1099 (1758)
T KOG0994|consen 1034 RFTGQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIGGPQCNEFTGQCQCKPGFGGRTCSQ 1099 (1758)
T ss_pred             cccCcCCCCcccccccccccccchhccccCCCCCccCCCccCCccccccccceeccCCCCCcchhH
Confidence            567889999999999999876542       1   21 1    24554557999999999998864

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=94.16  E-value=0.048  Score=22.95  Aligned_cols=20  Identities=25%  Similarity=0.806  Sum_probs=14.6

Q ss_pred             CCeEEc--CCCeEEeCCCcccC
Q psy17083         35 HGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus        35 ~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      +.+|++  +.+.|.|.+||.|.
T Consensus        11 nA~C~~~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen   11 NATCTNTGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             TCEEEE-TTSEEEEE-CEEECC
T ss_pred             CcEeecCCCCEEeECCCCCccC
Confidence            456765  67899999999875

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1217|consensus

Probab=94.15  E-value=0.13  Score=31.35  Aligned_cols=50  Identities=30%  Similarity=0.840  Sum_probs=37.0

Q ss_pred             CCCeeEcCCCCcCCCCCC----CCCCC-CCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQ----CKPYP-GCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~----c~~~~-~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      ..+.|.|..+|.+..++.    |.... .|.+ +.|..  ..+.|.|+.+|.+..++.
T Consensus       150 ~~~~c~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~  207 (487)
T KOG1217|consen  150 GPFRCSCTEGYEGEPCETDLDECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCET  207 (487)
T ss_pred             CceeeeeCCCcccccccccccccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcC
Confidence            357899999999998863    44222 2664 57876  557899999999988764

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=92.84  E-value=0.075  Score=20.50  Aligned_cols=10  Identities=30%  Similarity=0.996  Sum_probs=5.8

Q ss_pred             CeeEcCCCCc
Q psy17083         11 ASVQCRPGWR   20 (60)
Q Consensus        11 ~~C~C~~g~~   20 (60)
                      |.|.|++||.
T Consensus         2 y~C~C~~Gy~   11 (24)
T PF12662_consen    2 YTCSCPPGYQ   11 (24)
T ss_pred             EEeeCCCCCc
Confidence            4566666664

>PHA02887 EGF-like protein; Provisional

Probab=92.69  E-value=0.11  Score=27.59  Aligned_cols=18  Identities=28%  Similarity=0.589  Sum_probs=15.2

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ....|.|+.||+|.+|+.
T Consensus       106 ~epsCrC~~GYtG~RCE~  123 (126)
T PHA02887        106 DEKFCICNKGYTGIRCDE  123 (126)
T ss_pred             CCceeECCCCcccCCCCc
Confidence            346899999999999974

>KOG4260|consensus

Probab=90.89  E-value=0.19  Score=30.49  Aligned_cols=19  Identities=21%  Similarity=0.674  Sum_probs=16.6

Q ss_pred             cCCCeeEcCCCCcCCCCCC
Q psy17083          8 NIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+++|.|.+||+|+.|..
T Consensus       165 ~GsGkCkC~~GY~Gp~C~~  183 (350)
T KOG4260|consen  165 EGSGKCKCETGYTGPLCRY  183 (350)
T ss_pred             CCCCcccccCCCCCccccc
Confidence            5678999999999999864

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=90.34  E-value=0.23  Score=26.77  Aligned_cols=18  Identities=22%  Similarity=0.540  Sum_probs=15.6

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ....|.|+.||+|.+|+.
T Consensus        65 ~~~~CrC~~GYtGeRCEh   82 (139)
T PHA03099         65 DGMYCRCSHGYTGIRCQH   82 (139)
T ss_pred             CCceeECCCCcccccccc
Confidence            456899999999999985

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=87.34  E-value=0.55  Score=19.69  Aligned_cols=17  Identities=24%  Similarity=0.722  Sum_probs=11.8

Q ss_pred             eEEc--CCCeEEeCCCccc
Q psy17083         37 YCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~G   53 (60)
                      .|++  +.++|.|++||.-
T Consensus        11 ~C~~~~g~~~C~C~~Gy~L   29 (36)
T PF14670_consen   11 ICVNTPGSYRCSCPPGYKL   29 (36)
T ss_dssp             EEEEETTSEEEE-STTEEE
T ss_pred             CCccCCCceEeECCCCCEE
Confidence            4554  6789999999863

...

>KOG1836|consensus

Probab=86.85  E-value=0.65  Score=34.10  Aligned_cols=48  Identities=38%  Similarity=0.914  Sum_probs=32.4

Q ss_pred             CeeEcCCCCcCCCCCCCCCC---------C-----CCC-CC---eEEcCCCeEEeCCCcccCCCCc
Q psy17083         11 ASVQCRPGWRGEFCDQCKPY---------P-----GCK-HG---YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        11 ~~C~C~~g~~g~~C~~c~~~---------~-----~C~-~g---~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..|.|+.+|+|..|+.|.+.         +     .|. +|   +|...+++|.|...-.|..|++
T Consensus       695 e~c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd~~tG~C~C~~~t~G~~C~~  760 (1705)
T KOG1836|consen  695 EQCTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICDPRTGQCKCKHNTFGGQCAQ  760 (1705)
T ss_pred             hhccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCccccccCCCCceecccCCCCCchhh
Confidence            35999999999999876442         1     132 23   4555667888877777776653

>KOG3607|consensus

Probab=85.32  E-value=0.81  Score=30.90  Aligned_cols=24  Identities=38%  Similarity=0.798  Sum_probs=18.2

Q ss_pred             CCCCc-cCCCeeEcCCCCcCCCCCC
Q psy17083          3 NRLGR-NIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         3 ~~~g~-~~~~~C~C~~g~~g~~C~~   26 (60)
                      +.||. +..++|.|.+||.++.|+.
T Consensus       633 ~g~GVCnn~~~ChC~~gwapp~C~~  657 (716)
T KOG3607|consen  633 NGHGVCNNELNCHCEPGWAPPFCFI  657 (716)
T ss_pred             CCCcccCCCcceeeCCCCCCCcccc
Confidence            45776 4567899999999988864

>KOG3516|consensus

Probab=85.25  E-value=0.89  Score=32.40  Aligned_cols=33  Identities=36%  Similarity=1.122  Sum_probs=26.0

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeC-CCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICD-TNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~-~g~~G~~C~~~   59 (60)
                      .|.+++ |.| |.|..  ..+.|.|. .||.|..|...
T Consensus       547 rClPN~-CehgG~C~Qs~~~f~C~C~~TGY~GatCHts  583 (1306)
T KOG3516|consen  547 RCLPNP-CEHGGKCSQSWDDFECNCELTGYKGATCHTS  583 (1306)
T ss_pred             ccCCcc-ccCCCcccccccceeEeccccccccccccCC
Confidence            477777 986 57875  55789997 79999999764

>KOG1836|consensus

Probab=84.51  E-value=2.8  Score=31.10  Aligned_cols=51  Identities=41%  Similarity=0.918  Sum_probs=36.8

Q ss_pred             cCCCeeEcCCCCcCCCCCCCCCCC------C-----CC-CC----eEEcCCCeEEeCCCcccCCCCc
Q psy17083          8 NIRASVQCRPGWRGEFCDQCKPYP------G-----CK-HG----YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~~c~~~~------~-----C~-~g----~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..++.|.|.++.+|.+|++|...-      .     |. .|    .|.+..++|.|.+++.|..|++
T Consensus       956 ~~tGqc~c~~gVtgqrc~qc~~~~~~~~~~gc~~c~c~~~Gs~~~qc~~~~G~c~c~~~~~g~~c~~ 1022 (1705)
T KOG1836|consen  956 VGTGQCYCRPGVTGQRCDQCETYHFGFQTEGCGLCECDPLGSRGFQCDPEDGQCPCRPGFEGRRCDQ 1022 (1705)
T ss_pred             ccCCceeeecCccccccCccccCcccccccCCcceecccCCcccceecccCCeeeecCCCCCccccc
Confidence            467899999999999998764421      1     11 23    4664578999999999877653

>KOG1218|consensus

Probab=84.26  E-value=4.3  Score=23.90  Aligned_cols=44  Identities=32%  Similarity=0.798  Sum_probs=25.8

Q ss_pred             cCCCeeEcCCCCcCCCCCCC----CCCCCCCCC-eEEcCCCeEEeCCCc
Q psy17083          8 NIRASVQCRPGWRGEFCDQC----KPYPGCKHG-YCNGSSWQCICDTNW   51 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~~c----~~~~~C~~g-~C~~~~~~C~C~~g~   51 (60)
                      ...+.|.|.+||.|.++..-    .....+.++ .|......+.+.+.+
T Consensus       159 ~~~~~c~c~~g~~g~~~~~~~~~c~~~~~~~~g~~C~~~~~~~~~~~~~  207 (316)
T KOG1218|consen  159 CKNGICTCQPGFVGVFCVESCSGCSPLTACENGAKCNRSTGSCLCYPGP  207 (316)
T ss_pred             CCCCceeccCCcccccccccCCCcCCCcccCCCCeeeccccccccCCCC
Confidence            45678889999999888542    222234444 676544444444433

>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species

Probab=84.06  E-value=1.1  Score=23.24  Aligned_cols=26  Identities=38%  Similarity=1.212  Sum_probs=17.0

Q ss_pred             CC-CCeEEc-------CCCeEEeCC-------------CcccCCCCc
Q psy17083         33 CK-HGYCNG-------SSWQCICDT-------------NWGGILCDQ   58 (60)
Q Consensus        33 C~-~g~C~~-------~~~~C~C~~-------------g~~G~~C~~   58 (60)
                      |. ||.|+.       .-|.|.|.+             .|.|..|++
T Consensus        15 CsgHG~C~~~~~~~~~~C~~C~C~~T~~~~~~~~~ktt~W~G~aCqK   61 (103)
T PF12955_consen   15 CSGHGSCVKKYGSGGGDCFACKCKPTVVKTGSGKGKTTHWGGPACQK   61 (103)
T ss_pred             CCCCceEeeccCCCccceEEEEeeccccccccccCceeeeccccccc
Confidence            55 677764       125677765             578888864

It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.

>KOG3607|consensus

Probab=80.91  E-value=1.4  Score=29.87  Aligned_cols=25  Identities=36%  Similarity=1.089  Sum_probs=21.0

Q ss_pred             CC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083         33 CK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      |. +|.|. ....|.|.++|.++.|+.
T Consensus       632 C~g~GVCn-n~~~ChC~~gwapp~C~~  657 (716)
T KOG3607|consen  632 CNGHGVCN-NELNCHCEPGWAPPFCFI  657 (716)
T ss_pred             cCCCcccC-CCcceeeCCCCCCCcccc
Confidence            55 67887 578999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	60
2vj2_A	169	Human Jagged-1, Domains Dsl And Egfs1-3 Length = 16		2e-10
2kb9_A	44	Human Jagged-1, Exon 6 Length = 44		3e-10

>pdb|2VJ2|A Chain A, Human Jagged-1, Domains Dsl And Egfs1-3 Length = 169

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 9   IRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +    +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 81  LPGDCRCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDK 129

>pdb|2KB9|A Chain A, Human Jagged-1, Exon 6 Length = 44

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 14 QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
          +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 1  RCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCDK 44

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	60
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	8e-09
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	4e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	7e-07
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	5e-06

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 47.4 bits (113), Expect = 8e-09
 Identities = 27/45 (60%), Positives = 36/45 (80%), Gaps = 1/45 (2%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C+ GW+G +CD+C P+PGC HG CN   WQC+C+TNWGG LCD+
Sbjct: 86  RCQYGWQGLYCDKCIPHPGCVHGICNE-PWQCLCETNWGGQLCDK 129

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 12 SVQCRPGWRGEFCDQ-CKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
          +V C   + G  C++ C+P       Y    +    C   W G  C++
Sbjct: 18 AVTCDDYYYGFGCNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPECNR 65

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 42.9 bits (101), Expect = 7e-07
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 14  QCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQ 58
           +C  G+ G  C++    P C +G    +   CIC   + G+ CD+
Sbjct: 168 ECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDK 212

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A Length = 463

 Score = 40.3 bits (94), Expect = 5e-06
 Identities = 17/52 (32%), Positives = 23/52 (44%)

Query: 8   NIRASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCDQG 59
                  C PGW G+FC   K  P C+HG       +C+C   + G  C+Q 
Sbjct: 405 TPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQV 456

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	60
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.09
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.07
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.06
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.01
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.98
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.95
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.8
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.73
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.71
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	98.69
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.67
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.66
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.63
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.61
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.59
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	98.58
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.57
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.54
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.47
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	98.45
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	98.44
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.44
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.4
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	98.39
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.35
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.31
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.3
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	98.28
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.27
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.26
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.25
2vh0_B	134	Activated factor XA light chain; serine protease,	98.23
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.21
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.2
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.16
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	98.09
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	98.06
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	98.03
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.03
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.02
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.02
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.01
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.0
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.98
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.91
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	97.91
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	97.86
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.81
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	97.81
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.8
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.76
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.74
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.71
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.66
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.58
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.5
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.47
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	97.47
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	97.46
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	97.45
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	97.4
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	97.39
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.38
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.34
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.3
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	97.3
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	97.27
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.25
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	97.2
2vh0_B	134	Activated factor XA light chain; serine protease,	97.18
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.12
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	97.11
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.1
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	97.09
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	97.08
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.04
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	96.97
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	96.96
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	96.95
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	96.85
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.84
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	96.8
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	96.72
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.63
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	96.53
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	96.44
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.43
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.39
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.36
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.32
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	96.3
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	96.26
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.25
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	96.24
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	96.22
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.21
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.01
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	95.98
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	95.92
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	95.91
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	95.54
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	95.18
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	94.73
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	94.56
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	94.53
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	94.37
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.25
2ddu_A	387	Reelin; beta-jelly-roll, signaling protein; 2.05A	94.18
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.75
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	93.72
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	92.79
3t3p_B	472	Integrin beta-3; integrin, cell adhesion, blood cl	92.58
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	90.95
3v4v_B	503	Integrin beta-7; cell adhesion, madcam-1, membrane	90.47
3v65_B	386	Low-density lipoprotein receptor-related protein;	88.43
2p26_A	280	Integrin beta-2; hybrid domain, PSI domain, I-EGF	88.43
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	87.47
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	87.44
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	86.15
3g5c_A	510	ADAM 22; alpha/beta fold, cross-linked domain, cel	83.7
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	82.7
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	82.29
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	82.15
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	81.55
3t5o_A	913	Complement component C6; macpf, MAC, membrane atta	80.95

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.09  E-value=1.4e-10  Score=60.78  Aligned_cols=49  Identities=35%  Similarity=0.941  Sum_probs=34.3

Q ss_pred             CCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         10 RASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      .+.|.|++||+|..|+    +|...+ |. +++|++  +.++|.|++||.|..|+.+
T Consensus        65 ~~~C~C~~G~~G~~C~~~~~~C~~~~-C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~  120 (135)
T 2vj3_A           65 EFQCICMPGYEGVHCEVNTDECASSP-CLHNGRCLDKINEFQCECPTGFTGHLCQVD  120 (135)
T ss_dssp             CEEEECCTTEESSSSCEECCTTTTCC-STTTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CceeeCCCCCcCCcceecCCcccCCC-cCCCCEeECCCCCeEEECCCCCcCCccCcc
Confidence            4577888888887775    355555 76 467775  5577888888888887654

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.07  E-value=4.1e-10  Score=59.13  Aligned_cols=49  Identities=31%  Similarity=0.895  Sum_probs=39.3

Q ss_pred             CCeeEcCCCCcCCCCCC----------------CCCCCCCC-CCeEE-------c--CCCeEEeCCCcccCCCCcC
Q psy17083         10 RASVQCRPGWRGEFCDQ----------------CKPYPGCK-HGYCN-------G--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~----------------c~~~~~C~-~g~C~-------~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      .+.|.|++||+|..|+.                |...| |. +++|+       +  +.+.|.|++||.|..|+.+
T Consensus        22 ~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~-C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~   96 (143)
T 4d90_A           22 SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNP-CHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHN   96 (143)
T ss_dssp             CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCC-CCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEE
T ss_pred             CEEeECCCCCCCCCCccCccccccccccccCCcCCCCC-CCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccC
Confidence            57899999999999864                44445 76 47898       3  5789999999999999744

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.06  E-value=5.3e-11  Score=64.56  Aligned_cols=46  Identities=59%  Similarity=1.630  Sum_probs=19.1

Q ss_pred             CeeEcCCCCcCCCCCCCCCCCCCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083         11 ASVQCRPGWRGEFCDQCKPYPGCKHGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus        11 ~~C~C~~g~~g~~C~~c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      ++|+|++||+|..|++|...+.|.+|+|+ ..++|.|++||.|..|+
T Consensus        83 ~~C~C~~G~~G~~C~~C~~~~~C~~g~C~-~~~~C~C~~G~~G~~C~  128 (169)
T 2vj2_A           83 GDCRCQYGWQGLYCDKCIPHPGCVHGICN-EPWQCLCETNWGGQLCD  128 (169)
T ss_dssp             TCCEECTTEESSSSCEECCCTTCSSEECS-STTCCEECTTEETTTTC
T ss_pred             CeeECCCCCCCCCcccCCCCCCCCCCCcC-CCCEEeCCCCCCCCccc
Confidence            44444444444444443333333333343 33444444444444443

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.01  E-value=5.3e-10  Score=58.57  Aligned_cols=50  Identities=30%  Similarity=0.846  Sum_probs=41.5

Q ss_pred             CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083          9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      ..+.|.|++||+|..|+    +|...+ |. +++|++  +.+.|.|++||.|..|+.+
T Consensus        26 g~~~C~C~~Gy~G~~C~~~~~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~   82 (135)
T 2vj3_A           26 GSFECQCLQGYTGPRCEIDVNECVSNP-CQNDATCLDQIGEFQCICMPGYEGVHCEVN   82 (135)
T ss_dssp             SSEEEECCTTEESTTSCEECCTTTTCC-CCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CCEEEECCCCCcCCcccccCccCCCCC-CCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence            34699999999999996    476666 87 579986  6689999999999999754

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.98  E-value=9.7e-10  Score=57.68  Aligned_cols=48  Identities=29%  Similarity=0.834  Sum_probs=41.2

Q ss_pred             CCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         10 RASVQCRPGWRGEFCD----QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      .+.|.|++||+|.+|+    +|...+ |. +++|++  +.|+|.|++||.|..|+.
T Consensus        79 ~~~C~C~~G~~G~~C~~~i~~C~~~~-C~~~~~C~~~~g~~~C~C~~G~~G~~c~~  133 (143)
T 4d90_A           79 GYVCKCPRGFNGIHCQHNINECEVEP-CKNGGICTDLVANYSCECPGEFMGRNCQY  133 (143)
T ss_dssp             CEEEECCTTEESTTSCEECCTTTTCC-SCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred             CeEeECcCCCcCCCcccCCCcCCCCC-CCCCCEeECCCCCeEeECCCCCccCCcee
Confidence            6799999999999996    477677 87 579986  668999999999999975

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.95  E-value=1.5e-09  Score=53.84  Aligned_cols=49  Identities=24%  Similarity=0.637  Sum_probs=40.5

Q ss_pred             CCCeeEcCCCCcCCCCC-----CCCCCCCCCC-CeEEc----CCCeEEeCCCcccCCCCcCC
Q psy17083          9 IRASVQCRPGWRGEFCD-----QCKPYPGCKH-GYCNG----SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~-----~c~~~~~C~~-g~C~~----~~~~C~C~~g~~G~~C~~~~   60 (60)
                      ..+.|.|++||+  .|+     .|...| |.+ |+|++    +.+.|.|++||.|..|+++|
T Consensus        30 ~~y~C~C~~G~~--~C~~~~~~~C~~~p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i   88 (91)
T 1tpg_A           30 RVEYCWCNSGRA--QCHSVPVKSCSEPR-CFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   88 (91)
T ss_dssp             CEEEEECSSSCC--BCCEECEEECSSCC-SCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CCcEeECCCCCc--ccccCcCCcccCCC-CCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence            357899999998  785     377777 985 79985    56899999999999998765

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.80  E-value=9.5e-09  Score=60.57  Aligned_cols=54  Identities=30%  Similarity=0.691  Sum_probs=34.8

Q ss_pred             CCCcc-CCCeeEcCCCCcCCCCCCCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083          4 RLGRN-IRASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         4 ~~g~~-~~~~C~C~~g~~g~~C~~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      .+|.+ ..+.|.|++||+|..|+.-...+.|. +|+|+ ..+.|.|++||.|..|+.
T Consensus       157 ~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~-~~~~C~C~~G~~G~~C~~  212 (324)
T 2ygq_A          157 NGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCV-TPGFCICPPGFYGVNCDK  212 (324)
T ss_dssp             SSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEEC-SSCCEECCTTCBTTTTCB
T ss_pred             CCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEEc-CCCEEeCCCCccCCCccc
Confidence            34443 35778888888888876422223366 46777 357777877887777764

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.73  E-value=1.3e-08  Score=46.51  Aligned_cols=36  Identities=25%  Similarity=0.602  Sum_probs=29.3

Q ss_pred             CCCCCCCCCCCC-CeEE-----c--CCCeEEeCCCcccCCCCcCC
Q psy17083         24 CDQCKPYPGCKH-GYCN-----G--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        24 C~~c~~~~~C~~-g~C~-----~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      +++|...| |+| |+|.     +  ..|+|.|++||+|..|+..|
T Consensus         8 ~~eC~s~p-C~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v   51 (55)
T 3u7u_G            8 CAEKEKTF-CVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV   51 (55)
T ss_dssp             CCSTTTTT-SCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred             CCCCcCCC-CCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence            35788888 995 7994     2  57899999999999999764

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.71  E-value=1e-08  Score=57.74  Aligned_cols=55  Identities=27%  Similarity=0.573  Sum_probs=42.4

Q ss_pred             CCCCCccCCCeeEcCCCCcCCCCCC-------------CCC---CCCCC-CCeEEcCCCeEEeCCC------cccCCCCc
Q psy17083          2 SNRLGRNIRASVQCRPGWRGEFCDQ-------------CKP---YPGCK-HGYCNGSSWQCICDTN------WGGILCDQ   58 (60)
Q Consensus         2 ~~~~g~~~~~~C~C~~g~~g~~C~~-------------c~~---~~~C~-~g~C~~~~~~C~C~~g------~~G~~C~~   58 (60)
                      .+.||.+..+.|.|.+||+|.+|+-             |..   ...|. +|+|+.  ++|.|.++      |+|..|+.
T Consensus        98 Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~--g~C~C~~gw~~~~~~~G~~Ce~  175 (217)
T 2p28_B           98 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCEC  175 (217)
T ss_dssp             TTTSEEEETTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET--TEEEECCCCSTTCCEESTTSCE
T ss_pred             cCCCceEECCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC--CceECCCCCCCcccEECCCccc
Confidence            3567887789999999999999961             321   12266 589995  78999999      69999974

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=98.69  E-value=2.9e-09  Score=65.12  Aligned_cols=51  Identities=37%  Similarity=1.074  Sum_probs=18.0

Q ss_pred             CCccC-CCeeEcCCCCcCCCCCC--CCCCCCCCC-CeEEcCCCeEEeCCCcccCCCCc
Q psy17083          5 LGRNI-RASVQCRPGWRGEFCDQ--CKPYPGCKH-GYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         5 ~g~~~-~~~C~C~~g~~g~~C~~--c~~~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ||.+. .++|.|++||+|..|+.  |.. + |.+ |+|+ ..+.|.|++||+|..|+.
T Consensus       401 nG~C~~~~~C~C~~G~~G~~C~~~~C~~-~-C~~~g~C~-~~~~C~C~~G~~G~~C~~  455 (463)
T 2wg3_C          401 NGYCTPTGKCCCSPGWEGDFCRTAKCEP-A-CRHGGVCV-RPNKCLCKKGYLGPQCEQ  455 (463)
T ss_dssp             SEEECTTSCEEECTTEESTTSCEECC--------------------------------
T ss_pred             CCccCCCCeECCCCCcCCCcCCcCcCCC-C-CCCCCEEC-CCCEEECCCCcccCCCCC
Confidence            35443 47999999999999973  654 4 985 7999 458999999999999975

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.67  E-value=2e-08  Score=64.04  Aligned_cols=54  Identities=24%  Similarity=0.684  Sum_probs=42.8

Q ss_pred             CCCCccCCCeeEcCCCCcCCCCC------CCCCC--CCCC-CCeEEcCCCeEEe-CCCcccCCCCc
Q psy17083          3 NRLGRNIRASVQCRPGWRGEFCD------QCKPY--PGCK-HGYCNGSSWQCIC-DTNWGGILCDQ   58 (60)
Q Consensus         3 ~~~g~~~~~~C~C~~g~~g~~C~------~c~~~--~~C~-~g~C~~~~~~C~C-~~g~~G~~C~~   58 (60)
                      ..||.+..+.|.|++||+|..|+      .|...  ..|. +|+|+.  +.|.| ++||.|..|+.
T Consensus       537 ~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--g~C~C~~~Gy~G~~Ce~  600 (690)
T 3fcs_B          537 SGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--GSCVCIQPGSYGDTCEK  600 (690)
T ss_dssp             GGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--TEEECCSTTCBSTTSCB
T ss_pred             CCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--CEEECCCCCccCCCcCc
Confidence            34677777999999999999997      35431  1277 589985  79999 99999999985

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.66  E-value=1.2e-08  Score=55.21  Aligned_cols=49  Identities=31%  Similarity=0.904  Sum_probs=39.9

Q ss_pred             CCCeeEcCCCCcCCCCCC----CCC-CCCCC-CCeEEc---CCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQ----CKP-YPGCK-HGYCNG---SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~----c~~-~~~C~-~g~C~~---~~~~C~C~~g~~G~~C~~   58 (60)
                      ..++|.|++||+|..|+.    |.. .+ |. +|+|++   +.++|.|++||+|..|++
T Consensus       112 ~~~~C~C~~G~~G~~C~~~~~~C~~~~~-C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~  169 (169)
T 2vj2_A          112 EPWQCLCETNWGGQLCDKDLNYCGTHQP-CLNGGTCSNTGPDKYQCSCPEGYSGPNCEI  169 (169)
T ss_dssp             STTCCEECTTEETTTTCEESCHHHHTCC-CCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred             CCCEEeCCCCCCCCcccCCCCCCCCCCC-CCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence            468999999999999972    443 45 88 479985   458999999999999974

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.63  E-value=4.1e-08  Score=57.85  Aligned_cols=48  Identities=29%  Similarity=0.638  Sum_probs=28.1

Q ss_pred             CCeeEcCCCCcCCCCCCCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083         10 RASVQCRPGWRGEFCDQCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ++.|.|++||+|..|+.-.....|. +|+|+ ..+.|.|++||.|..|+.
T Consensus       196 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~-~~~~C~C~~G~~G~~C~~  244 (324)
T 2ygq_A          196 PGFCICPPGFYGVNCDKANCSTTCFNGGTCF-YPGKCICPPGLEGEQCEI  244 (324)
T ss_dssp             SCCEECCTTCBTTTTCBCCCSSCCCSSCCBS-CSSCBCCCTTCCTTTTC-
T ss_pred             CCEEeCCCCccCCCcccCcCCCCCCCCCeeC-CCCeeeCCCCccCCCCCc
Confidence            4677777777777775321112255 35665 345666666666666653

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.61  E-value=1.2e-08  Score=65.01  Aligned_cols=52  Identities=27%  Similarity=0.698  Sum_probs=41.5

Q ss_pred             CCccCCCeeEcCCCCcCCCCC------CCCCC--CCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083          5 LGRNIRASVQCRPGWRGEFCD------QCKPY--PGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         5 ~g~~~~~~C~C~~g~~g~~C~------~c~~~--~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ||.+..+.|.|.+||+|..|+      .|...  ..|. +|+|..  ++|.|.+||.|..|++
T Consensus       532 ~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--g~C~C~~Gy~G~~Ce~  592 (687)
T 3k6s_B          532 RGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--NVCECHSGYQLPLCQE  592 (687)
T ss_dssp             HEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS--SCBCCSTTCCTTTTCC
T ss_pred             CCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC--CEEECCCCCcCCCCCC
Confidence            666777899999999999997      24432  1276 578885  7899999999999985

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.59  E-value=7.6e-08  Score=58.46  Aligned_cols=56  Identities=30%  Similarity=0.843  Sum_probs=42.1

Q ss_pred             CCCCccC--CCeeEcCCCCcCCCCCC-CCC-------------CCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083          3 NRLGRNI--RASVQCRPGWRGEFCDQ-CKP-------------YPGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         3 ~~~g~~~--~~~C~C~~g~~g~~C~~-c~~-------------~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..+|.+.  .+.|.|++||+|.+|+. |..             ...|. ++.|....++|.|++||.|..|+.
T Consensus       206 ~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~  278 (423)
T 2gy5_A          206 MNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNE  278 (423)
T ss_dssp             CTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCB
T ss_pred             CCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccC
Confidence            3456544  58999999999999984 421             22255 368877789999999999998874

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=98.58  E-value=2.3e-08  Score=56.38  Aligned_cols=54  Identities=26%  Similarity=0.762  Sum_probs=42.8

Q ss_pred             CCCCccCCCeeEcCCC------CcCCCCC----CCCCC---CCCC-C--CeEEcCCCeEEeCCCcccCCCCcC
Q psy17083          3 NRLGRNIRASVQCRPG------WRGEFCD----QCKPY---PGCK-H--GYCNGSSWQCICDTNWGGILCDQG   59 (60)
Q Consensus         3 ~~~g~~~~~~C~C~~g------~~g~~C~----~c~~~---~~C~-~--g~C~~~~~~C~C~~g~~G~~C~~~   59 (60)
                      +.||.+..+.|.|.+|      |+|.+|+    .|...   + |. +  |+|..  ++|.|.+||+|..|+..
T Consensus       146 sg~G~C~~g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~-C~~~~~G~C~~--g~C~C~~G~~G~~C~~~  215 (217)
T 2p28_B          146 SGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQV-CGGPGRGLCFC--GKCRCHPGFEGSACQHH  215 (217)
T ss_dssp             GGTEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEE-TTCTTTEEEET--TEEEECTTEESTTSCEE
T ss_pred             CCCCEEeCCceECCCCCCCcccEECCCcccCCccCCCCCCCC-CCCCCCcEEeC--CeeECCCCCccCCcCCC
Confidence            4567777889999999      5999997    25433   3 76 5  89995  79999999999999853

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.57  E-value=4e-08  Score=62.71  Aligned_cols=54  Identities=26%  Similarity=0.565  Sum_probs=42.8

Q ss_pred             CCCCccCCCeeEcCCCCcCCCCC-------------CCCCCC---CCC-CCeEEcCCCeEEeC------CCcccCCCCc
Q psy17083          3 NRLGRNIRASVQCRPGWRGEFCD-------------QCKPYP---GCK-HGYCNGSSWQCICD------TNWGGILCDQ   58 (60)
Q Consensus         3 ~~~g~~~~~~C~C~~g~~g~~C~-------------~c~~~~---~C~-~g~C~~~~~~C~C~------~g~~G~~C~~   58 (60)
                      +.||.+..+.|.|.+||+|.+|+             .|...+   .|. +|+|+.  ++|.|+      +||.|..|+.
T Consensus       438 s~~G~C~~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G~C~C~~~~~~~~G~~G~~Ce~  514 (687)
T 3k6s_B          438 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCEC  514 (687)
T ss_dssp             GGSEEESSSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--TEEEECCCCSTTCCEESTTSCE
T ss_pred             CCCCEEeCCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--CEEEcCCCCCCCCCcccccccc
Confidence            45677778999999999999997             254321   276 589994  799999      9999999973

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.54  E-value=3.4e-08  Score=47.89  Aligned_cols=46  Identities=24%  Similarity=0.686  Sum_probs=37.2

Q ss_pred             CCCeeEcCCCCc--CCCCC---CCC-CCCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083          9 IRASVQCRPGWR--GEFCD---QCK-PYPGCKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus         9 ~~~~C~C~~g~~--g~~C~---~c~-~~~~C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      ..|.|.|++||.  |..|+   +|. ..+ |.+++|++  +.|.|.|++||.|..
T Consensus        24 g~y~C~C~~Gy~~~g~~C~dideC~~~~~-C~~~~C~n~~g~y~C~C~~G~~g~~   77 (82)
T 1emn_A           24 GSYRCECPFGYILAGNECVDTDECSVGNP-CGNGTCKNVIGGFECTCEEGFEPGP   77 (82)
T ss_dssp             SCCCEECCTTEEEETTEEEECCGGGTCCT-TSSSCEEECSSSEEECCSSSSCCCS
T ss_pred             CCEEEECCCCeECCCCccCCcccccCCCC-CCCCEeECCCCCEEeECCCCeEeCC
Confidence            468999999997  88884   465 455 88789987  779999999998754

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.47  E-value=1e-07  Score=60.92  Aligned_cols=53  Identities=30%  Similarity=0.938  Sum_probs=42.9

Q ss_pred             CCCCccCCCeeEcC----CCCcCCCCC----CCCCC--CCCC-CCeEEcCCCeEEeCCCcccCCCC
Q psy17083          3 NRLGRNIRASVQCR----PGWRGEFCD----QCKPY--PGCK-HGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus         3 ~~~g~~~~~~C~C~----~g~~g~~C~----~c~~~--~~C~-~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      +.+|.+..+.|.|+    +||+|.+|+    .|...  ..|. +|+|..  +.|.|++||.|..|+
T Consensus       496 s~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce  559 (690)
T 3fcs_B          496 SQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDCLCDSDWTGYYCN  559 (690)
T ss_dssp             GGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEEEECTTEESSSSC
T ss_pred             CCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--CeeECcCCCcCCCCc
Confidence            45677778999999    999999996    25432  2377 689985  999999999999998

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=98.45  E-value=2.6e-07  Score=40.25  Aligned_cols=29  Identities=24%  Similarity=0.582  Sum_probs=24.3

Q ss_pred             CCCCC-CeEE--c--CCCeEEeCCCcccCCCCcCC
Q psy17083         31 PGCKH-GYCN--G--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        31 ~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      | |.+ |+|+  +  +.+.|.|++||+|..|+.+|
T Consensus        10 p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   43 (45)
T 1a3p_A           10 Y-CLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD   43 (45)
T ss_dssp             C-CSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred             C-CCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence            6 885 7997  3  67899999999999998754

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=98.44  E-value=2e-07  Score=40.98  Aligned_cols=29  Identities=31%  Similarity=0.683  Sum_probs=24.8

Q ss_pred             CCCCCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083         30 YPGCKHGYCNG----SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        30 ~~~C~~g~C~~----~~~~C~C~~g~~G~~C~~~   59 (60)
                      .| |.||+|..    +.+.|.|++||+|..|+.+
T Consensus        12 ~p-C~nG~C~~~~~~~~~~C~C~~GytG~~Ce~~   44 (46)
T 1k36_A           12 GY-CLHGQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             SS-CSSEEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             CC-CCCCEeeccCCCCCEEEECCCCCccCCCCcc
Confidence            66 99899984    3689999999999999865

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.44  E-value=4.5e-07  Score=55.09  Aligned_cols=50  Identities=28%  Similarity=0.925  Sum_probs=38.9

Q ss_pred             CCCeeEcCCCCcCCCCCC-CCCC--------C-CCC-CCeEEcCCCeEEeCCCcccCCCCcC
Q psy17083          9 IRASVQCRPGWRGEFCDQ-CKPY--------P-GCK-HGYCNGSSWQCICDTNWGGILCDQG   59 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~-c~~~--------~-~C~-~g~C~~~~~~C~C~~g~~G~~C~~~   59 (60)
                      ..+.|.|++||+|.+|+. |...        + .|. +|+|.. ...|.|++||.|..|+..
T Consensus       261 ~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~-~~~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          261 DPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDR-FQGCLCSPGWQGLQCERE  321 (423)
T ss_dssp             TTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEET-TTEEECCTTCBSTTSCBC
T ss_pred             CCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecC-CCceECCCCCcCCCCccC
Confidence            468999999999999985 5432        0 265 468984 456999999999999864

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.40  E-value=3.9e-07  Score=38.39  Aligned_cols=32  Identities=34%  Similarity=0.980  Sum_probs=26.1

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      +|...| |.+ |+|++  +.+.|.|++||.|..|+.
T Consensus         5 ~C~~~p-C~ngg~C~~~~~~~~C~C~~G~~G~~Ce~   39 (39)
T 1edm_B            5 QCESNP-CLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             TTTTCC-CCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             cCCCCC-CCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence            466677 885 79986  678999999999999973

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=98.39  E-value=8e-08  Score=44.60  Aligned_cols=37  Identities=24%  Similarity=0.595  Sum_probs=28.8

Q ss_pred             CCCCCCCCCCCCC-CeEEc-------CCCeEEeCCCcccCCCCcCC
Q psy17083         23 FCDQCKPYPGCKH-GYCNG-------SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        23 ~C~~c~~~~~C~~-g~C~~-------~~~~C~C~~g~~G~~C~~~~   60 (60)
                      .|+.|...| |.+ |+|+.       +.+.|.|++||+|..|+.+|
T Consensus         5 ~c~~C~~~p-C~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i   49 (63)
T 1hae_A            5 KCAEKEKTF-CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV   49 (63)
T ss_dssp             ECCHHHHTT-SCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred             ccCCCCCCc-CCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence            355666677 985 79973       56899999999999998653

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.35  E-value=1.7e-07  Score=49.78  Aligned_cols=49  Identities=29%  Similarity=0.750  Sum_probs=37.3

Q ss_pred             CCCeeEcCCCCcCCCCC---CCCCCC-CCCCCeE-Ec--CCCeEEeCCCcc----cCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCD---QCKPYP-GCKHGYC-NG--SSWQCICDTNWG----GILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~---~c~~~~-~C~~g~C-~~--~~~~C~C~~g~~----G~~C~~   58 (60)
                      ..|.|.|++||+|..|+   +|...+ .|.+ +| ++  +.|.|.|++||.    |..|+.
T Consensus        67 ~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~  126 (146)
T 1x7a_L           67 NSYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKP  126 (146)
T ss_dssp             SCEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred             CCEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence            36799999999999996   355432 2554 78 55  779999999999    777753

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.31  E-value=1.2e-06  Score=39.32  Aligned_cols=29  Identities=28%  Similarity=0.716  Sum_probs=24.4

Q ss_pred             CCCCC-CeEE--c--CCCeEEeCCCcccCCCCcCC
Q psy17083         31 PGCKH-GYCN--G--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        31 ~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      | |.+ |+|+  .  +.+.|.|++||+|..|+.++
T Consensus        13 p-C~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~   46 (53)
T 1egf_A           13 Y-CLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD   46 (53)
T ss_dssp             S-SCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred             c-CCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence            6 885 7998  4  67899999999999998753

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.30  E-value=1.5e-07  Score=52.36  Aligned_cols=49  Identities=24%  Similarity=0.692  Sum_probs=22.5

Q ss_pred             CCCeeEcCCCCcCCCCCC-----CCCCC-CCCCCeEEc--CCCeEEeCCCcc----cCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQ-----CKPYP-GCKHGYCNG--SSWQCICDTNWG----GILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~-----c~~~~-~C~~g~C~~--~~~~C~C~~g~~----G~~C~~   58 (60)
                      ..|.|.|++||+|..|+.     |...+ .|.+ +|++  +.|.|.|++||.    |..|+.
T Consensus        61 g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~  121 (195)
T 1nfu_B           61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIP  121 (195)
T ss_dssp             --------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCeeEeCCCCceeccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCcccc
Confidence            458999999999999963     54321 2655 8886  678999999999    888864

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=98.28  E-value=3.9e-08  Score=44.20  Aligned_cols=40  Identities=18%  Similarity=0.593  Sum_probs=30.7

Q ss_pred             CeeEcCCCCcCCCCCCCCCCCCCCC-CeEEc------CCCeEEeCCCcccCCCCcC
Q psy17083         11 ASVQCRPGWRGEFCDQCKPYPGCKH-GYCNG------SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        11 ~~C~C~~g~~g~~C~~c~~~~~C~~-g~C~~------~~~~C~C~~g~~G~~C~~~   59 (60)
                      .+|.|+++|+        ..| |.| |+|+.      ..+.|.|++||+|..|+..
T Consensus         3 ~~C~C~~g~~--------~~p-C~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~   49 (52)
T 3ca7_A            3 PTYKCPETFD--------AWY-CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK   49 (52)
T ss_dssp             CCBCCCHHHH--------HHT-SCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred             eeeECCCCCc--------CCc-CCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence            3688888887        345 875 68983      3579999999999999853

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.27  E-value=8.9e-07  Score=46.42  Aligned_cols=48  Identities=25%  Similarity=0.763  Sum_probs=36.5

Q ss_pred             cCCCeeEcCCCCcC---------CCCC---CCCCC---CCCC-CCeEEc--CCCeEEeCCCcccCCC
Q psy17083          8 NIRASVQCRPGWRG---------EFCD---QCKPY---PGCK-HGYCNG--SSWQCICDTNWGGILC   56 (60)
Q Consensus         8 ~~~~~C~C~~g~~g---------~~C~---~c~~~---~~C~-~g~C~~--~~~~C~C~~g~~G~~C   56 (60)
                      ...+.|.|++||+|         ..|+   +|...   + |. +++|++  +.|.|.|++||.|..+
T Consensus        16 ~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~-C~~~~~C~n~~g~y~C~C~~Gy~g~~~   81 (143)
T 2bou_A           16 VNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVS-CGKFSDCWNTEGSYDCVCSPGYEPVSG   81 (143)
T ss_dssp             SSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----C-CCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred             cCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCC-CCCCCEEEcCCCCeEeECCCCcccCcC
Confidence            34589999999998         4663   46554   4 87 478986  6789999999998744

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.26  E-value=6.8e-07  Score=45.53  Aligned_cols=44  Identities=36%  Similarity=0.939  Sum_probs=32.6

Q ss_pred             CCCeeEcCCCCcCCCCCC------CCCCC-CCCCCeEEc--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWRGEFCDQ------CKPYP-GCKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~------c~~~~-~C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      ..|.|.|++||+|..|+.      |...+ .|.+ +|++  +.|.|.|++||.+
T Consensus        33 ~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~   85 (114)
T 1aut_L           33 GSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKL   85 (114)
T ss_dssp             SCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEE
T ss_pred             CCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeE
Confidence            457999999999999974      32211 1322 7886  7799999999984

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.25  E-value=1e-06  Score=46.44  Aligned_cols=49  Identities=22%  Similarity=0.631  Sum_probs=36.4

Q ss_pred             CCCeeEcCCCCcCCCCCC----CCCCCCCCC-C---eEEc--C-CCeEEeCCCcc----cCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQ----CKPYPGCKH-G---YCNG--S-SWQCICDTNWG----GILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~----c~~~~~C~~-g---~C~~--~-~~~C~C~~g~~----G~~C~~   58 (60)
                      ..|.|.|++||+|..|+.    +..-+ +.+ +   +|++  + .|.|.|++||.    |..|+.
T Consensus        66 g~y~C~C~~G~~G~~C~~~~~~c~~c~-~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~  129 (142)
T 2c4f_L           66 QSYICFCLPAFEGRNCETHKDDQLICV-NENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP  129 (142)
T ss_dssp             TEEEEECCTTEESTTSCEEGGGCCSTT-TGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred             CCEEeeCCCCccCCccccCcccccccc-CCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence            357999999999999974    21122 332 3   7886  5 89999999999    888753

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.23  E-value=2.7e-07  Score=48.31  Aligned_cols=49  Identities=24%  Similarity=0.692  Sum_probs=21.7

Q ss_pred             CCCeeEcCCCCcCCCCCC-----CCCCC-CCCCCeEEc--CCCeEEeCCCcc----cCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQ-----CKPYP-GCKHGYCNG--SSWQCICDTNWG----GILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~-----c~~~~-~C~~g~C~~--~~~~C~C~~g~~----G~~C~~   58 (60)
                      ..|.|.|++||+|..|+.     |...+ .|.+ +|++  +.|.|.|++||.    |..|+.
T Consensus        61 ~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~  121 (134)
T 2vh0_B           61 GEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIP  121 (134)
T ss_dssp             --------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCEEeeCCCCccCCccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccCc
Confidence            357999999999999964     43321 2554 8876  678999999999    888853

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.21  E-value=2.5e-06  Score=49.47  Aligned_cols=44  Identities=30%  Similarity=0.866  Sum_probs=36.3

Q ss_pred             CCCeeEcCCCCcCCCCC----CCCC---CCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083          9 IRASVQCRPGWRGEFCD----QCKP---YPGCKHGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~----~c~~---~~~C~~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      ..+.|.|++||.|..|+    +|..   .+ |.+ +|++  +.+.|.|++||.+.
T Consensus        24 ~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~-C~~-~C~~~~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B           24 WGYTCTCSPGYEGSNCELAKNECHPERTDG-CQH-FCLPGQESYTCSCAQGYRLG   76 (317)
T ss_dssp             SSCCCCCSSSCCSSSSCCCSSSCCTTCTTS-CSS-EEECCSSSCEEECCTTEECC
T ss_pred             CCeEEECCCCCcCCccccCcccCCCCCCCC-CcC-ccccCCCeeEEecccccccc
Confidence            35799999999999996    4765   44 877 8987  77999999999874

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.20  E-value=3.4e-07  Score=44.72  Aligned_cols=47  Identities=26%  Similarity=0.682  Sum_probs=34.4

Q ss_pred             CCCeeEcCCCCc----CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQCRPGWR----GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~----g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      ..|.|.|++||+    |..|+   +|...+ |. ++|++  +.|.|.|+ ++.|..++.
T Consensus        23 g~y~C~C~~G~~~~~~g~~C~dideC~~~~-C~-~~C~n~~g~y~C~C~-g~~G~~~~~   78 (87)
T 1z6c_A           23 GDFECECPEGYRYNLKSKSCEDIDECSENM-CA-QLCVNYPGGYTCYCD-GKKGFKLAQ   78 (87)
T ss_dssp             TBCCCSSSTTCEEETTTTEEECCCHHHHSC-CS-SEECCCSSSCCEECC-SSSCCBCCT
T ss_pred             CCEEEECCCCceECCCCCcCCCcCeeCCCC-CC-CEEEccCCCEEEECC-CCcCCcccC
Confidence            458999999998    67774   355555 76 68886  77999997 666655543

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.16  E-value=2.7e-07  Score=44.97  Aligned_cols=47  Identities=23%  Similarity=0.590  Sum_probs=35.3

Q ss_pred             CCCeeEcCCCCc-----CCCCC---CCCCCC-CCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083          9 IRASVQCRPGWR-----GEFCD---QCKPYP-GCKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus         9 ~~~~C~C~~g~~-----g~~C~---~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      ..|.|.|++||.     |..|+   +|...+ .|.+++|++  +.|.|.|++||.+..
T Consensus        23 g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~   80 (86)
T 1lmj_A           23 GDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP   80 (86)
T ss_dssp             TEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred             CCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence            358999999998     66664   354433 266689987  779999999998754

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=98.09  E-value=1.5e-06  Score=39.20  Aligned_cols=35  Identities=26%  Similarity=0.617  Sum_probs=26.1

Q ss_pred             CCCCCCCCCCCC-CeEE--c--CCCeEEeCCCcccCCCCcC
Q psy17083         24 CDQCKPYPGCKH-GYCN--G--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        24 C~~c~~~~~C~~-g~C~--~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      |..-...| |.+ |+|+  +  +.+.|.|++||+|..|+.+
T Consensus         6 C~~~~~~p-C~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~   45 (53)
T 1nql_B            6 CPLSHDGY-CLHDGVCMYIEALDKYACNCVVGYIGERCQYR   45 (53)
T ss_dssp             CCSTTCCE-ECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred             cCCCCCCC-CCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence            33333456 886 7997  3  5689999999999999864

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=98.06  E-value=5.9e-07  Score=48.93  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=36.1

Q ss_pred             CCCeeEcCCCCcCCCCC----CCCCCCCCC-CCeEE----c--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWRGEFCD----QCKPYPGCK-HGYCN----G--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~----~c~~~~~C~-~g~C~----~--~~~~C~C~~g~~G   53 (60)
                      ..|.|.|++||+|..++    +|...| |. +++|+    +  +.++|.|++||.|
T Consensus        72 g~y~C~C~~G~~g~~~~C~~d~C~~~~-C~~~g~C~~~~~~~~g~~~C~C~~Gy~g  126 (186)
T 1z1y_A           72 NMYXCGCIEGYTLXEDTCVLDVCQYXN-CGESGECIVEYLSEIQSAGCSCAIGXVP  126 (186)
T ss_dssp             CSEEEEECTTEEEETTEEEEGGGTTCC-CCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred             CCEECCCCCCCccCCCCCCCCcCcCCC-CCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence            46799999999998652    577777 88 57898    4  4689999999998

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=98.03  E-value=1.5e-06  Score=53.67  Aligned_cols=50  Identities=34%  Similarity=0.706  Sum_probs=15.9

Q ss_pred             CCCeeEcCCCCcCCCCCCCCCC------------C-CCCC-C----eEEcCCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQCRPGWRGEFCDQCKPY------------P-GCKH-G----YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~~------------~-~C~~-g----~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..+.|.|++||+|.+|++|...            + .|.+ |    .|....++|.|++||.|..|++
T Consensus       458 ~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq  525 (525)
T 4aqs_A          458 ETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE  525 (525)
T ss_dssp             TTCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred             CCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence            4578999999999999865321            1 1332 3    3433456899999999999974

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.03  E-value=9.3e-07  Score=45.32  Aligned_cols=44  Identities=30%  Similarity=0.795  Sum_probs=30.7

Q ss_pred             CCCeeEcCCCCc---CCCCC---CCCC-CCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083          9 IRASVQCRPGWR---GEFCD---QCKP-YPGCKHGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus         9 ~~~~C~C~~g~~---g~~C~---~c~~-~~~C~~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      ..+.|.|++||+   |..|+   +|.. .+ | +++|++  +.|+|.|++||.|.
T Consensus        59 ~~y~C~C~~Gy~~~~g~~C~dideC~~~~~-C-~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           59 TQASCECPEGYILDDGFICTDIDECENGGF-C-SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             STTCEECCTTEEEETTTEEEECCHHHHCSS-C-SSEEEECSSSEEEEECSSSSCE
T ss_pred             CCeEeECCCCccCCCCCccccccccCCCCC-C-cCeEEeCCCCEEEECCCCCccC
Confidence            357788888888   66663   3544 44 7 677875  66888888888764

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.02  E-value=1.5e-06  Score=45.53  Aligned_cols=48  Identities=23%  Similarity=0.605  Sum_probs=35.9

Q ss_pred             CCCeeEcCCCCcCCC------------CC---CCCC--CCCCC-CCeEEc--CCCeEEeCCCcccCCCC
Q psy17083          9 IRASVQCRPGWRGEF------------CD---QCKP--YPGCK-HGYCNG--SSWQCICDTNWGGILCD   57 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~------------C~---~c~~--~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~   57 (60)
                      ..|.|.|++||.|..            |+   +|..  .+ |. +++|++  +.|+|.|++||.|....
T Consensus        66 g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~-C~~~~~C~n~~g~y~C~C~~Gy~g~~~~  133 (143)
T 2bou_A           66 GSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQ-CDSSTVCFNTVGSYSCRCRPGWKPRHGI  133 (143)
T ss_dssp             SCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCC-CCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred             CCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCC-CCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence            457999999999874            32   2432  44 87 478987  77899999999987653

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.02  E-value=7.2e-07  Score=44.00  Aligned_cols=42  Identities=19%  Similarity=0.290  Sum_probs=31.1

Q ss_pred             CCeeEcCCCCcCCCCC--CCCCCCCCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083         10 RASVQCRPGWRGEFCD--QCKPYPGCKHGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~--~c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      +|.|.|.+||+|..|+  +|...| |.++.   ..+.|.|++||.  .|+
T Consensus         1 sy~C~C~~g~~g~~c~~~~c~~~p-C~n~~---~~y~C~C~~G~~--~C~   44 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQQHQSWLRP-VLRSN---RVEYCWCNSGRA--QCH   44 (91)
T ss_dssp             CCCCCCBCSSSCCBCCSSCEEEEE-CSSSS---CEEEEECSSSCC--BCC
T ss_pred             CeeeECCCCCcCCeECCCcccCCc-cccCC---CCcEeECCCCCc--ccc
Confidence            4789999999999885  244444 55431   458999999997  675

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.01  E-value=1.9e-08  Score=58.23  Aligned_cols=52  Identities=12%  Similarity=0.163  Sum_probs=38.4

Q ss_pred             CCCeeEcCCCCcCCCCCC----------CCCCC----------------------CCC-CCeEEc--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWRGEFCDQ----------CKPYP----------------------GCK-HGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~----------c~~~~----------------------~C~-~g~C~~--~~~~C~C~~g~~G   53 (60)
                      ..|.|.|++||+|.+|+.          +...|                      .|. .|+|++  ..|+|.|++||+|
T Consensus        51 ~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G  130 (267)
T 4fbr_A           51 MTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKS  130 (267)
T ss_dssp             EEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             CCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccc
Confidence            468999999999999963          33322                      144 256665  6689999999999


Q ss_pred             CCCCcCC
Q psy17083         54 ILCDQGH   60 (60)
Q Consensus        54 ~~C~~~~   60 (60)
                      ..|+.+|
T Consensus       131 ~~Ce~~~  137 (267)
T 4fbr_A          131 EVTDGDT  137 (267)
T ss_dssp             EECCCCE
T ss_pred             cCCCCCc
Confidence            9998753

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.00  E-value=7e-07  Score=41.42  Aligned_cols=32  Identities=25%  Similarity=0.738  Sum_probs=26.2

Q ss_pred             CCCCCCCCCC---CeEEc--CCCeEEeCCCcc-cCCCCc
Q psy17083         26 QCKPYPGCKH---GYCNG--SSWQCICDTNWG-GILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~---g~C~~--~~~~C~C~~g~~-G~~C~~   58 (60)
                      +|...| |.+   |+|++  +.|.|.|++||. |..|+.
T Consensus        13 ~C~snP-C~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~   50 (61)
T 2k2s_B           13 ACSSNP-CGPEAAGTCKETNSGYICRCNQGYRISLDGTG   50 (61)
T ss_dssp             HHHHCS-SCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred             cCcCCC-CcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence            466677 985   59987  668999999999 999975

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.98  E-value=1.4e-06  Score=44.58  Aligned_cols=46  Identities=20%  Similarity=0.579  Sum_probs=33.1

Q ss_pred             CCCeeEcCCCCcCCCCC--CCC----CCCCCCCCeEEc-CCCeEEeCCCcc---cCCC
Q psy17083          9 IRASVQCRPGWRGEFCD--QCK----PYPGCKHGYCNG-SSWQCICDTNWG---GILC   56 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~--~c~----~~~~C~~g~C~~-~~~~C~C~~g~~---G~~C   56 (60)
                      ..|+|.|++||.|..++  +|.    ..+ |. ++|++ +.+.|.|++||.   |..|
T Consensus        22 g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~-C~-~~C~~~~~y~C~C~~Gy~~~~g~~C   77 (118)
T 1dx5_I           22 TSYLCVCAEGFAPIPHEPHRCQMFCNQTA-CP-ADCDPNTQASCECPEGYILDDGFIC   77 (118)
T ss_dssp             SCEEEECCTTEEEETTEEEEEEECCCSSE-EE-CEECTTSTTCEECCTTEEEETTTEE
T ss_pred             CCEEeECCCCccccCCCCCccccccCCCC-CC-CcccCCCCeEeECCCCccCCCCCcc
Confidence            46899999999998543  232    222 33 56665 678999999999   7777

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=97.91  E-value=9.3e-06  Score=47.29  Aligned_cols=53  Identities=28%  Similarity=0.598  Sum_probs=39.1

Q ss_pred             CCCCccCCCeeEcCCCCcCCCCC-------------CCCCC---CCCC-CCeEEcCCCeEEeCCCc------ccCCCC
Q psy17083          3 NRLGRNIRASVQCRPGWRGEFCD-------------QCKPY---PGCK-HGYCNGSSWQCICDTNW------GGILCD   57 (60)
Q Consensus         3 ~~~g~~~~~~C~C~~g~~g~~C~-------------~c~~~---~~C~-~g~C~~~~~~C~C~~g~------~G~~C~   57 (60)
                      ++||...-+.|.|.+||+|..|+             .|...   +.|. +|.|+-  ++|.|...|      .|.+|+
T Consensus       199 ~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C--G~C~C~~~~~~~~~~~G~~~~  274 (280)
T 2p26_A          199 HGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--GQCLCHTSDVPGKLIYGQYCE  274 (280)
T ss_dssp             GGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET--TEEEECCCSSTTCEEESTTSC
T ss_pred             CCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC--CeeECcCCCCCCeeEeeEecc
Confidence            45677778899999999999996             24321   2366 588885  899997775      677775

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=97.91  E-value=2.2e-06  Score=46.66  Aligned_cols=47  Identities=19%  Similarity=0.524  Sum_probs=37.1

Q ss_pred             CCeeEcCCCCcC-----CCCC-----CCCCCCCC-C-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         10 RASVQCRPGWRG-----EFCD-----QCKPYPGC-K-HGYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        10 ~~~C~C~~g~~g-----~~C~-----~c~~~~~C-~-~g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      .+.|.|++||.|     ..|+     +|. .+ | . +++|++  +.|+|.|++||.|..++.
T Consensus       115 ~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~-C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~  175 (186)
T 1z1y_A          115 SAGCSCAIGXVPNPEDEXXCTXTGETACQ-LX-CNTDNEVCXNVEGVYXCQCMEGFTFDXEXN  175 (186)
T ss_dssp             EEEEEECTEEEEETTTTTEEEEEECCCCC-CC-CCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred             CceEECCCCCcccCCCCCcceEcCCCccc-cc-ccccCcceecCCCCeeeECCCCCccCcccc
Confidence            579999999998     6664     354 34 8 6 578986  678999999999988764

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=97.86  E-value=2.4e-06  Score=43.29  Aligned_cols=45  Identities=20%  Similarity=0.609  Sum_probs=14.0

Q ss_pred             CCCeeEcCCCCcC---CCCC---CCCC-CCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083          9 IRASVQCRPGWRG---EFCD---QCKP-YPGCKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus         9 ~~~~C~C~~g~~g---~~C~---~c~~-~~~C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      ..|.|.|++||.|   ..|+   +|.. .+ |. ++|++  +.|.|.|++||.+..
T Consensus        48 g~y~C~C~~Gy~g~~g~~C~dideC~~~~~-C~-~~C~n~~gsy~C~C~~Gy~~~~  101 (107)
T 2w2n_E           48 IGYECLCPDGFQLVAQRRCEDIDECQDPDT-CS-QLCVNLEGGYKCQCEEGFQLDP  101 (107)
T ss_dssp             BSCEEECCTTCEEETTTEEEC-----------------------------------
T ss_pred             CCeEEECCCCccccCCCccccccccCCCCC-cC-CeeecCCCCEEEECCCCceECC
Confidence            4689999999998   6664   4543 33 65 67876  779999999998653

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.81  E-value=1.7e-05  Score=50.46  Aligned_cols=48  Identities=25%  Similarity=0.642  Sum_probs=37.9

Q ss_pred             CCee-EcCCCCcC--CCCC---CCCCCC-CCCC-C---eEEc--CCCeEE-eCCCcccCCCC
Q psy17083         10 RASV-QCRPGWRG--EFCD---QCKPYP-GCKH-G---YCNG--SSWQCI-CDTNWGGILCD   57 (60)
Q Consensus        10 ~~~C-~C~~g~~g--~~C~---~c~~~~-~C~~-g---~C~~--~~~~C~-C~~g~~G~~C~   57 (60)
                      +|+| .|++||+|  ..|+   +|...| .|.+ +   +|++  +.|+|. |++||.|..|+
T Consensus        24 sy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~   85 (634)
T 1yo8_A           24 SWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPV   85 (634)
T ss_dssp             CEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCE
T ss_pred             CeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccc
Confidence            3799 99999998  7886   576544 2874 5   7986  678998 99999998764

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=97.81  E-value=2.3e-05  Score=43.44  Aligned_cols=29  Identities=31%  Similarity=0.887  Sum_probs=24.5

Q ss_pred             CCCCCC-CeEEcCCCeEEeCCCcccCCCCcC
Q psy17083         30 YPGCKH-GYCNGSSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        30 ~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~~   59 (60)
                      .+.|.+ |.|+ .+.+|.|++||.|..|++.
T Consensus       152 ~~~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~~  181 (188)
T 2ygo_A          152 PGGCRNGGFCN-ERRICECPDGFHGPHCEGT  181 (188)
T ss_dssp             TTCCCTTCEEC-TTSCEECCTTCBTTTTCBC
T ss_pred             CCCCCCCCEeC-CCCcccCcCCCCCCCCcCC
Confidence            345884 7999 7899999999999999863

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.80  E-value=5.1e-06  Score=44.71  Aligned_cols=50  Identities=30%  Similarity=0.642  Sum_probs=37.0

Q ss_pred             CCCeeE-cCCCCcCCCCCCCCCC---------------C-CCC-CC------eEEcCCCeEEeCCCcccCCCCc
Q psy17083          9 IRASVQ-CRPGWRGEFCDQCKPY---------------P-GCK-HG------YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus         9 ~~~~C~-C~~g~~g~~C~~c~~~---------------~-~C~-~g------~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      .+++|. |.++|+|.+|+.|...               + .|. .|      +|....++|.|+++|+|..|++
T Consensus        73 ~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd~  146 (162)
T 1klo_A           73 LTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGT  146 (162)
T ss_dssp             TTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCE
T ss_pred             CCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCCC
Confidence            568995 9999999999876431               1 132 12      5665578999999999999974

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.76  E-value=3.2e-06  Score=44.53  Aligned_cols=45  Identities=29%  Similarity=0.801  Sum_probs=34.6

Q ss_pred             CeeEcCCCCc---CCCCC---CCCCCC-CCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083         11 ASVQCRPGWR---GEFCD---QCKPYP-GCKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus        11 ~~C~C~~g~~---g~~C~---~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      +.|.|++||.   |..|+   +|...| .|.+++|++  +.|+|.|++||.|..
T Consensus        88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCC
Confidence            6778999995   88885   354322 288789987  779999999998764

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.74  E-value=5.1e-06  Score=50.90  Aligned_cols=45  Identities=27%  Similarity=0.801  Sum_probs=35.8

Q ss_pred             eeEcCCCCcCCCCCC--CCCCCCCCCCeEEcCCCeEEeCCCcccCCCCcC
Q psy17083         12 SVQCRPGWRGEFCDQ--CKPYPGCKHGYCNGSSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        12 ~C~C~~g~~g~~C~~--c~~~~~C~~g~C~~~~~~C~C~~g~~G~~C~~~   59 (60)
                      ...|..+|.|..|+.  |.. + |.+|+|+ ..+.|.|++||+|..|+.+
T Consensus       378 p~~C~~~~~g~~c~~~~C~~-~-C~nG~C~-~~~~C~C~~G~~G~~C~~~  424 (463)
T 2wg3_C          378 PEECRATVQPAQTLTSECSR-L-CRNGYCT-PTGKCCCSPGWEGDFCRTA  424 (463)
T ss_dssp             CGGGCCCCCCCCCCCCHHHH-H-CCSEEEC-TTSCEEECTTEESTTSCEE
T ss_pred             cccCCCCCcCCCCccccccC-C-CCCCccC-CCCeECCCCCcCCCcCCcC
Confidence            357888999998863  543 4 8889999 4679999999999999753

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.71  E-value=6.7e-08  Score=55.96  Aligned_cols=52  Identities=13%  Similarity=0.157  Sum_probs=37.6

Q ss_pred             CCCeeEcCCCCcCCCCCC----------CCCCC----------------------CCC-CCeEEc--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWRGEFCDQ----------CKPYP----------------------GCK-HGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~----------c~~~~----------------------~C~-~g~C~~--~~~~C~C~~g~~G   53 (60)
                      ..|+|.|++||+|.+|+.          +...|                      .|. +|+|++  ..|+|.|++||+|
T Consensus       118 ~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G  197 (267)
T 4fbr_A          118 TTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG  197 (267)
T ss_dssp             EEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE
T ss_pred             ccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc
Confidence            458899999999998862          22212                      133 356765  5688999999999


Q ss_pred             CCCCcCC
Q psy17083         54 ILCDQGH   60 (60)
Q Consensus        54 ~~C~~~~   60 (60)
                      .+|+.+|
T Consensus       198 ~~c~~~i  204 (267)
T 4fbr_A          198 TLTSPDT  204 (267)
T ss_dssp             EEEETTE
T ss_pred             ccccccc
Confidence            9987654

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.66  E-value=2.4e-05  Score=49.82  Aligned_cols=49  Identities=29%  Similarity=0.730  Sum_probs=36.9

Q ss_pred             CCCeeE-cCCCCcCCCCC------------------CCCC--CCCCC-CCeEEc------CCCeEEeCCCccc--CCCCc
Q psy17083          9 IRASVQ-CRPGWRGEFCD------------------QCKP--YPGCK-HGYCNG------SSWQCICDTNWGG--ILCDQ   58 (60)
Q Consensus         9 ~~~~C~-C~~g~~g~~C~------------------~c~~--~~~C~-~g~C~~------~~~~C~C~~g~~G--~~C~~   58 (60)
                      ..|+|. |++||+|..|+                  +|..  .+ |. +++|+.      +.|+|.|++||.|  ..|++
T Consensus        68 gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~p-C~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~  146 (634)
T 1yo8_A           68 PGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHN-CHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE  146 (634)
T ss_dssp             SSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCC-CCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred             CceecccCCCCcccCccccccccccccCCCcccccccccCCCcc-cccCccccccccccccceeeeccCCccccCccccc
Confidence            457898 99999988753                  3554  24 87 468975      3689999999998  77863

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.58  E-value=1.8e-05  Score=46.98  Aligned_cols=47  Identities=28%  Similarity=0.870  Sum_probs=17.1

Q ss_pred             CCeeEcCCCCc----CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083         10 RASVQCRPGWR----GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWG----GILCD   57 (60)
Q Consensus        10 ~~~C~C~~g~~----g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~----G~~C~   57 (60)
                      .+.|.|++||.    |..|+   +|.....|.++ |++  +.|.|.|++||.    |..|.
T Consensus        23 ~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           23 AVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             -----------------------------CCTTE-EC-----CCEECCTTEEECTTSSCEE
T ss_pred             CcEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEcCCCCeEC
Confidence            47999999998    88885   46522227654 876  779999999997    66664

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.50  E-value=4e-05  Score=40.25  Aligned_cols=32  Identities=34%  Similarity=0.976  Sum_probs=26.8

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      +|...| |.+ |+|++  +.|.|.|++||.|..|+.
T Consensus        49 ~C~~~p-C~n~g~C~~~~g~y~C~C~~G~~G~~C~~   83 (142)
T 2c4f_L           49 QCASSP-CQNGGSCKDQLQSYICFCLPAFEGRNCET   83 (142)
T ss_dssp             GGGGCC-CCTTCEEEEETTEEEEECCTTEESTTSCE
T ss_pred             cCcCCC-cCCCCEEeCCCCCEEeeCCCCccCCcccc
Confidence            466677 985 79987  678999999999999975

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.47  E-value=5.2e-05  Score=45.24  Aligned_cols=45  Identities=20%  Similarity=0.651  Sum_probs=33.7

Q ss_pred             CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCcccC
Q psy17083          9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus         9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      ..|.|.|++||.   |..|+   +|.....|.+ .|++  +.|.|.|.+||.+.
T Consensus        19 ~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~   71 (400)
T 3p5b_L           19 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLD   71 (400)
T ss_dssp             SSEEEECCTTEEECSSSCEEECCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCC
T ss_pred             CCeEEECCCCCCcCCCCcccCchhhhccCCCCC-ccCCCccceeeecccccccc
Confidence            468999999998   77784   4653223654 6776  77999999999754

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=97.47  E-value=9.4e-05  Score=35.83  Aligned_cols=27  Identities=33%  Similarity=0.771  Sum_probs=22.8

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~~   59 (60)
                      |.||+|..    ..+.|.|++||+|..|+..
T Consensus        48 ClnG~C~~i~~~~~~~C~C~~GYtG~RCE~l   78 (79)
T 1xdt_R           48 CIHGECKYVKELRAPSCICHPGYHGERCHGL   78 (79)
T ss_dssp             CSSEEECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred             CCCCEeeeecCCCCeEEEcCCCccccccccc
Confidence            89999952    4578999999999999864

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=97.46  E-value=5e-05  Score=40.18  Aligned_cols=32  Identities=25%  Similarity=0.742  Sum_probs=25.8

Q ss_pred             CCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         27 CKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        27 c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      |...| |. +|+|.+  +.++|.|++||.|..|+.+
T Consensus       122 c~~~~-C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~  156 (162)
T 1g1s_A          122 CQDMS-CSKQGECLETIGNYTCSCYPGFYGPECEYV  156 (162)
T ss_dssp             CCTTG-GGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             CcCCC-CCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence            44455 77 478987  6789999999999999864

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=97.45  E-value=2.1e-05  Score=50.73  Aligned_cols=44  Identities=30%  Similarity=0.743  Sum_probs=32.8

Q ss_pred             eEcCCCCcCCCCC-CCCCCCCCC-CCeEEcCCCeEEeCCCcccCCCCc
Q psy17083         13 VQCRPGWRGEFCD-QCKPYPGCK-HGYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        13 C~C~~g~~g~~C~-~c~~~~~C~-~g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      ..|.++|.|..|. .-.+...|. ||+|+.  ++|+|.+||.|..|++
T Consensus       520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~--G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ--GSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             CCTTCCEEEEEEEEESCSSGGGGGSEEEET--TEEEECTTEESTTSCE
T ss_pred             CccCCCcccccccccCCCCcccCCCcEECC--CCEeeCCCccCCCcCc
Confidence            3678999998886 222222376 789995  7899999999998864

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=97.40  E-value=0.00014  Score=32.31  Aligned_cols=26  Identities=31%  Similarity=0.885  Sum_probs=22.2

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |.||+|..    ....|.|++||+|..|+.
T Consensus        16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           16 CFHGTCRFLVQEDKPACVCHSGYVGARCEH   45 (50)
T ss_pred             ccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence            88888873    567999999999999974

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=97.39  E-value=6.8e-05  Score=40.29  Aligned_cols=48  Identities=33%  Similarity=0.839  Sum_probs=34.4

Q ss_pred             Cee-EcCCCCcCCCCCCCCCC----C-------------CCC-C------CeEEcCCCeEE-eCCCcccCCCCc
Q psy17083         11 ASV-QCRPGWRGEFCDQCKPY----P-------------GCK-H------GYCNGSSWQCI-CDTNWGGILCDQ   58 (60)
Q Consensus        11 ~~C-~C~~g~~g~~C~~c~~~----~-------------~C~-~------g~C~~~~~~C~-C~~g~~G~~C~~   58 (60)
                      ++| .|+++|+|.+|+.|...    |             .|. +      +.|....++|. |+++|.|..|++
T Consensus        18 ~~C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~   91 (162)
T 1klo_A           18 VVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR   91 (162)
T ss_dssp             EEECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE
T ss_pred             EEeCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc
Confidence            689 69999999999976431    1             122 1      35655568894 999999998864

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.38  E-value=0.00017  Score=38.11  Aligned_cols=32  Identities=38%  Similarity=1.114  Sum_probs=26.6

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      +|...| |.+ |+|++  +.|.|.|++||.|..|+.
T Consensus        50 eC~~~p-C~n~g~C~~~~~~y~C~C~~G~~G~~C~~   84 (146)
T 1x7a_L           50 QCEPNP-CLNGGLCKDDINSYECWCQVGFEGKNCEL   84 (146)
T ss_dssp             CCSSCS-SCTTCEEEECSSCEEEECCSSEESTTTCE
T ss_pred             cCCCCC-CCCCCEeECCCCCEEEecCCCCcCCcCCC
Confidence            477777 985 79986  678999999999999863

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.34  E-value=9.8e-05  Score=42.75  Aligned_cols=34  Identities=29%  Similarity=0.894  Sum_probs=27.4

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      +|...| |.+ |+|.+  +.+.|.|++||.|..|+.||
T Consensus         7 ~C~~~p-C~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~   43 (317)
T 3h5c_B            7 PCISQP-CLHNGSCQDSIWGYTCTCSPGYEGSNCELAK   43 (317)
T ss_dssp             CTTSCC-CTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS
T ss_pred             cCCCCC-CCCCCEeECCCCCeEEECCCCCcCCccccCc
Confidence            466677 885 78886  66899999999999998553

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.30  E-value=3.5e-05  Score=42.81  Aligned_cols=33  Identities=30%  Similarity=0.882  Sum_probs=0.0

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      +|...| |.+ |+|++  +.|.|.|++||.|..|+.+
T Consensus        44 eC~~~p-C~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~   79 (195)
T 1nfu_B           44 QCETSP-CQNQGKCKDGLGEYTCTCLEGFEGKNCELF   79 (195)
T ss_dssp             -------------------------------------
T ss_pred             ccCCCC-CCCCCEeECCCCCeeEeCCCCceecccccc
Confidence            577777 985 78986  6789999999999999753

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=97.30  E-value=7.9e-05  Score=39.11  Aligned_cols=33  Identities=33%  Similarity=0.938  Sum_probs=26.7

Q ss_pred             CCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083         27 CKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        27 c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      |...| |. +|.|.+  ..+.|.|.++|.|..|+++|
T Consensus       122 ~~~~p-c~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~  157 (157)
T 1g1t_A          122 CTNTS-CSGHGECVETINNYTCKCDPGFSGLKCEQIV  157 (157)
T ss_dssp             CCTTG-GGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred             CCCCC-CCCCCEeecCCCCeeEECCCCccCccccccC
Confidence            44445 76 478987  67899999999999999876

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=97.27  E-value=0.00014  Score=33.12  Aligned_cols=26  Identities=23%  Similarity=0.723  Sum_probs=21.1

Q ss_pred             CCC-CeEEc------CCCeEEeCCCcccCCCCc
Q psy17083         33 CKH-GYCNG------SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~-g~C~~------~~~~C~C~~g~~G~~C~~   58 (60)
                      |.| |+|..      ..+.|.|++||+|..|+.
T Consensus        16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           16 CLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             SCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred             CCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence            885 68972      346899999999999975

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.25  E-value=0.00026  Score=35.81  Aligned_cols=26  Identities=38%  Similarity=1.138  Sum_probs=21.7

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      |. +|+|++  +.|+|.|++||.|..|+.
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~   50 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQR   50 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEESTTSCE
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCCCcCc
Confidence            54 578986  678999999999999874

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=97.20  E-value=0.00012  Score=32.48  Aligned_cols=27  Identities=30%  Similarity=0.802  Sum_probs=22.0

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~~   59 (60)
                      |.||+|.-    ....|+|++||+|..|+..
T Consensus        16 C~nG~C~~~~~~~~~~C~C~~gy~G~RCe~~   46 (50)
T 1iox_A           16 CIKGRCRFVVAEQTPSCVCDEGYIGARCERV   46 (50)
T ss_dssp             CTTCCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred             ccCCEEEeEcCCCCeEEECCCCcccCCCCee
Confidence            88888852    4568999999999999853

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.18  E-value=5.6e-05  Score=39.38  Aligned_cols=32  Identities=31%  Similarity=0.964  Sum_probs=0.0

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      .|...| |.+ |+|++  +.|.|.|++||.|..|+.
T Consensus        44 ~C~~~p-C~n~g~C~~~~~~y~C~C~~G~~G~~C~~   78 (134)
T 2vh0_B           44 QCETSP-CQNQGKCKDGLGEYTCTCLEGFEGKNCEL   78 (134)
T ss_dssp             ------------------------------------
T ss_pred             cCCCCC-CCCcCCcccCCCCEEeeCCCCccCCcccc
Confidence            466677 885 78986  678999999999999975

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.12  E-value=0.00031  Score=33.66  Aligned_cols=30  Identities=40%  Similarity=0.934  Sum_probs=23.7

Q ss_pred             CCCC-CCCCCCCeEEc--CCCeEEeCCCcc--cCCC
Q psy17083         26 QCKP-YPGCKHGYCNG--SSWQCICDTNWG--GILC   56 (60)
Q Consensus        26 ~c~~-~~~C~~g~C~~--~~~~C~C~~g~~--G~~C   56 (60)
                      +|.. .+ |.+++|++  +.|.|.|++||.  |..|
T Consensus         7 eC~~~~~-C~~g~C~n~~g~y~C~C~~Gy~~~g~~C   41 (82)
T 1emn_A            7 ECKEPDV-CKHGQCINTDGSYRCECPFGYILAGNEC   41 (82)
T ss_dssp             SSSSTTS-CSSSEECCCSSCCCEECCTTEEEETTEE
T ss_pred             cCCCCCC-cCCCEEEecCCCEEEECCCCeECCCCcc
Confidence            4554 45 88889987  779999999997  7776

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=97.11  E-value=0.00012  Score=44.83  Aligned_cols=18  Identities=22%  Similarity=0.711  Sum_probs=15.3

Q ss_pred             CCeeEcCCCCcCCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQC   27 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~c   27 (60)
                      .+.|.|+.++.|+.|+.|
T Consensus       312 ~~~C~C~~~ttG~~CE~C  329 (426)
T 3zyj_B          312 KLTCECEHNTTGPDCGKC  329 (426)
T ss_dssp             EEEECCCTTEESSSSCEE
T ss_pred             CceeeCCCCCcCCCcccc
Confidence            368999999999999865

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.10  E-value=3e-05  Score=41.32  Aligned_cols=23  Identities=35%  Similarity=0.681  Sum_probs=19.8

Q ss_pred             CCCCeEEc--CCCeEEeCCCcccCC
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      |.+++|++  ++|+|.|++||.|..
T Consensus       132 C~~g~C~n~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A          132 CQGGKCINTFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             GBTSEEEECSSCEEEECCTTCCBCT
T ss_pred             cCCCEeEcCCCCEEeeCCCCccCCC
Confidence            77789987  789999999998865

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=97.09  E-value=0.00034  Score=44.33  Aligned_cols=33  Identities=30%  Similarity=0.825  Sum_probs=27.6

Q ss_pred             CCCCCCCCCC-CeEEc---CCCeEEeC-CCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG---SSWQCICD-TNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~---~~~~C~C~-~g~~G~~C~~~   59 (60)
                      .|...| |.| |+|++   +.|.|.|+ +||+|..|+..
T Consensus         3 ~C~s~P-C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   40 (587)
T 3nt1_A            3 PCCSNP-CQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (587)
T ss_dssp             TTTTCC-CCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CCCCCC-CCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence            477788 996 69984   57899999 99999999863

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=97.08  E-value=0.00043  Score=30.73  Aligned_cols=26  Identities=31%  Similarity=0.806  Sum_probs=22.0

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |.||+|.-    ....|+|+.+|+|..|+.
T Consensus        20 C~nG~C~~i~~~~~~~C~C~~gy~G~RCe~   49 (50)
T 2rnl_A           20 CIHGECKYIEHLEAVTCKCQQEYFGERCGE   49 (50)
T ss_dssp             CSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred             CCCCEEEEecCCCCeeEECCCCcccccccc
Confidence            88899972    456899999999999985

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.04  E-value=0.00026  Score=30.78  Aligned_cols=17  Identities=24%  Similarity=0.751  Sum_probs=15.2

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        27 ~~~C~C~~GytG~~Ce~   43 (46)
T 1k36_A           27 QNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             EEEEEECTTCSSTTSCC
T ss_pred             CEEEECCCCCccCCCCc
Confidence            57899999999999974

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=96.97  E-value=0.00034  Score=43.97  Aligned_cols=33  Identities=39%  Similarity=0.976  Sum_probs=27.4

Q ss_pred             CCCCCCCCCC-CeEEc---CCCeEEeC-CCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG---SSWQCICD-TNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~---~~~~C~C~-~g~~G~~C~~~   59 (60)
                      +|...| |+| |+|.+   +.|.|.|+ +||.|..|+..
T Consensus         4 ~C~~~P-C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   41 (553)
T 1q4g_A            4 PCCYYP-CQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (553)
T ss_dssp             GGGGCC-CCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             cCCCCC-CCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence            467788 995 79986   46899999 99999999864

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=96.96  E-value=0.00031  Score=31.74  Aligned_cols=18  Identities=22%  Similarity=0.586  Sum_probs=16.0

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..|.|.|++||+|.+|+.
T Consensus        32 ~~y~C~C~~g~~G~~CE~   49 (55)
T 3u7u_G           32 SRYLCKCPNEFTGDRCQN   49 (55)
T ss_dssp             CCEEEEECTTEESTTSCE
T ss_pred             CCEeEeCCCCCcCCCcCc
Confidence            468999999999999974

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=96.95  E-value=0.00065  Score=37.64  Aligned_cols=24  Identities=29%  Similarity=0.620  Sum_probs=19.8

Q ss_pred             CCCCc-cCCCeeEcCCCCcCCCCCC
Q psy17083          3 NRLGR-NIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         3 ~~~g~-~~~~~C~C~~g~~g~~C~~   26 (60)
                      .++|. ..++.|.|++||+|.+|+.
T Consensus       156 ~ngG~Cv~P~~C~C~~Gw~G~~C~~  180 (188)
T 2ygo_A          156 RNGGFCNERRICECPDGFHGPHCEG  180 (188)
T ss_dssp             CTTCEECTTSCEECCTTCBTTTTCB
T ss_pred             CCCCEeCCCCcccCcCCCCCCCCcC
Confidence            45566 5689999999999999975

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=96.85  E-value=0.00057  Score=35.75  Aligned_cols=30  Identities=30%  Similarity=0.740  Sum_probs=21.9

Q ss_pred             CCCCCCCCCCCCeEEc--CCCeEEeCCCcccCC
Q psy17083         25 DQCKPYPGCKHGYCNG--SSWQCICDTNWGGIL   55 (60)
Q Consensus        25 ~~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~~   55 (60)
                      ++|...| |.+|+|++  +.|+|.|++||.|..
T Consensus         5 deC~~~p-C~ng~C~n~~g~y~C~C~~G~~g~~   36 (147)
T 2w86_A            5 DECESSP-CINGVCKNSPGSFICECSSESTLDP   36 (147)
T ss_dssp             CGGGGCC-SBTSEEEEETTEEEEECCTTEEECT
T ss_pred             ccCcCCC-CCCCEeECCCCCEEeECCCCcccCC
Confidence            3455566 87778876  668888888888754

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.84  E-value=0.00052  Score=29.45  Aligned_cols=18  Identities=22%  Similarity=0.591  Sum_probs=15.6

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|.+|+.
T Consensus        24 ~~~~C~C~~G~~G~~Ce~   41 (45)
T 1a3p_A           24 DSYTCNCVIGYSGDRCQT   41 (45)
T ss_dssp             SSEEEECCTTEETTTTCE
T ss_pred             CCEEEEcCCCCcCCcCCc
Confidence            468999999999999963

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=96.80  E-value=0.00061  Score=28.18  Aligned_cols=17  Identities=24%  Similarity=0.561  Sum_probs=14.9

Q ss_pred             CCCeeEcCCCCcCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCD   25 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~   25 (60)
                      ..+.|.|++||+|.+|+
T Consensus        22 ~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B           22 NSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TEEEEECCTTCCSTTSC
T ss_pred             CceEeECCCCCcCCccC
Confidence            35789999999999986

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=96.72  E-value=0.0012  Score=34.86  Aligned_cols=27  Identities=33%  Similarity=0.866  Sum_probs=23.2

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      |. +|+|..  ..+.|.|.+||.|..|+.+
T Consensus       127 C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~  156 (164)
T 3cfw_A          127 CSGHGECVEIINNYTCNCDVGYYGPQCQFV  156 (164)
T ss_dssp             SCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred             CCCCCeecccCCCceeeeCCCccccccccc
Confidence            76 688985  6789999999999999865

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.63  E-value=0.0018  Score=33.32  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=24.0

Q ss_pred             eeEcCCCCcCCCCCCCCCCC-CCCCCeEEcCCCeEEeCCCcccCCCC
Q psy17083         12 SVQCRPGWRGEFCDQCKPYP-GCKHGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus        12 ~C~C~~g~~g~~C~~c~~~~-~C~~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      .|.|+++|+|.+|+.  ... .|..+.  ...|++.+...++|..|+
T Consensus        20 ~C~Cp~g~~G~~Ce~--~~~~~C~~g~--G~~YrG~~~~t~sG~~Cq   62 (122)
T 2fd6_A           20 WCNCPKKFGGQHCEI--DKSKTCYEGN--GHFYRGKASTDTMGRPCL   62 (122)
T ss_dssp             EEECCTTEESTTSCE--ESSCCSBCSS--CTTCCSCCCBBTTSCBBC
T ss_pred             CccCCCCCCCccccc--cCcCCCcccc--cccceeeccccccCCccc
Confidence            678888888877753  112 122211  034666776677777664

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=96.53  E-value=0.0015  Score=28.93  Aligned_cols=18  Identities=22%  Similarity=0.591  Sum_probs=15.6

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|.+|+.
T Consensus        27 ~~~~C~C~~G~~G~~Ce~   44 (53)
T 1egf_A           27 DSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             SCEEEECCTTCCSSSSCC
T ss_pred             CCEEEECCCCCcCCcCCc
Confidence            357899999999999974

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=96.44  E-value=0.0017  Score=32.60  Aligned_cols=42  Identities=19%  Similarity=0.516  Sum_probs=27.0

Q ss_pred             cCCCCcCCCCC--CCCCCC-CCCCCeEEc--CCCeEEeCCCccc---CCCC
Q psy17083         15 CRPGWRGEFCD--QCKPYP-GCKHGYCNG--SSWQCICDTNWGG---ILCD   57 (60)
Q Consensus        15 C~~g~~g~~C~--~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G---~~C~   57 (60)
                      ...+|.+..|+  +|...+ .|. .+|++  +.|.|.|++||.|   ..|+
T Consensus        18 ~~~~~~~~~Cd~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~~g~~C~   67 (107)
T 2w2n_E           18 TENLYFQGAMGTNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLVAQRRCE   67 (107)
T ss_dssp             --CCCCSCCBSCCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEETTTEEE
T ss_pred             cCCCcCCCCCcCccCcCCCCCCC-CEeEeCCCCeEEECCCCccccCCCccc
Confidence            35678888874  243211 132 37876  6799999999998   5664

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.43  E-value=0.00095  Score=29.76  Aligned_cols=17  Identities=29%  Similarity=0.706  Sum_probs=15.2

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        28 ~~~C~C~~GytG~~Ce~   44 (53)
T 1nql_B           28 KYACNCVVGYIGERCQY   44 (53)
T ss_dssp             EEEEEECTTEESTTSCE
T ss_pred             CEEEecCCCCcCCCCCc
Confidence            47899999999999974

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.39  E-value=0.0014  Score=29.89  Aligned_cols=17  Identities=35%  Similarity=0.894  Sum_probs=15.2

Q ss_pred             CCCeeEcCCCCcCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCD   25 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~   25 (60)
                      ..+.|.|++||+|.+|+
T Consensus        30 ~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A           30 SRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CCEEEECCTTEESTTSC
T ss_pred             CCEEEECCCCCcCCccC
Confidence            35789999999999996

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.36  E-value=0.0016  Score=34.48  Aligned_cols=31  Identities=26%  Similarity=0.725  Sum_probs=21.9

Q ss_pred             CCCC-CCCCCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083         26 QCKP-YPGCKHGYCNG--SSWQCICDTNWG----GILCD   57 (60)
Q Consensus        26 ~c~~-~~~C~~g~C~~--~~~~C~C~~g~~----G~~C~   57 (60)
                      +|.. .| |.+++|++  +.|+|.|++||.    |..|+
T Consensus         5 eC~~~~~-C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   42 (162)
T 1uzk_A            5 ECLDPTT-CISGNCVNTPGSYICDCPPDFELNPTRVGCV   42 (162)
T ss_dssp             GGGSTTS-SBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred             cCCCCCC-CCCCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence            4542 45 76778876  678888888887    66664

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.32  E-value=0.0022  Score=40.87  Aligned_cols=44  Identities=20%  Similarity=0.678  Sum_probs=31.9

Q ss_pred             CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      ..|.|.|++||.   |..|+   +|.....|. ..|++  +.|.|.|++||.+
T Consensus       313 ~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~  364 (699)
T 1n7d_A          313 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL  364 (699)
T ss_dssp             TCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred             CCcEEeCCCCeEcCCCCcccCccccCCCCccc-cccccCCCCeeeeeeccccc
Confidence            468999999998   66775   454222254 35665  7899999999975

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=96.30  E-value=0.0047  Score=37.30  Aligned_cols=50  Identities=28%  Similarity=0.761  Sum_probs=33.4

Q ss_pred             CCCeeEcCCCCcCCCCCCCCCC----C----------C---CC---CC-eEE---------cCCCeE-EeCCCcccCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQCKPY----P----------G---CK---HG-YCN---------GSSWQC-ICDTNWGGILCD   57 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~~----~----------~---C~---~g-~C~---------~~~~~C-~C~~g~~G~~C~   57 (60)
                      ..+.|.|.++|.|.+|+.|...    |          .   |.   ++ .|.         ...++| .|.++|.|..|+
T Consensus       270 ~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce  349 (375)
T 4aqt_A          270 DKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE  349 (375)
T ss_dssp             SCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC
T ss_pred             CCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC
Confidence            3457899999999999976431    1          1   21   12 232         144678 499999999997


Q ss_pred             c
Q psy17083         58 Q   58 (60)
Q Consensus        58 ~   58 (60)
                      +
T Consensus       350 ~  350 (375)
T 4aqt_A          350 R  350 (375)
T ss_dssp             E
T ss_pred             C
Confidence            4

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=96.26  E-value=0.00087  Score=43.42  Aligned_cols=26  Identities=35%  Similarity=0.864  Sum_probs=23.4

Q ss_pred             CCCCCCccCCCeeEcCCCCcCCCCCC
Q psy17083          1 MSNRLGRNIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         1 ~~~~~g~~~~~~C~C~~g~~g~~C~~   26 (60)
                      +++.||.++.+.|+|++||.|..|+.
T Consensus       540 ~C~ghG~C~~G~C~Cd~G~~G~~C~~  565 (725)
T 2e26_A          540 MCSGHGRCVQGSCVCDEQWGGLYCDE  565 (725)
T ss_dssp             GGGGSEEEETTEEEECTTEESTTSCE
T ss_pred             ccCCCcEECCCCEeeCCCccCCCcCc
Confidence            46789999999999999999999974

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.25  E-value=0.0017  Score=28.68  Aligned_cols=17  Identities=29%  Similarity=0.669  Sum_probs=14.9

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        32 ~y~C~C~~Gf~G~~Ce~   48 (52)
T 3ca7_A           32 VYSCECAIGFMGQRCEY   48 (52)
T ss_dssp             EEEEECCTTEESTTSCE
T ss_pred             CEEEECCCCCcCCCCcc
Confidence            46899999999999973

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=96.24  E-value=0.0019  Score=31.05  Aligned_cols=32  Identities=28%  Similarity=0.786  Sum_probs=22.8

Q ss_pred             CCCCCC-CCCCCeEEc--CCCeEEeCCCcc-----cCCCC
Q psy17083         26 QCKPYP-GCKHGYCNG--SSWQCICDTNWG-----GILCD   57 (60)
Q Consensus        26 ~c~~~~-~C~~g~C~~--~~~~C~C~~g~~-----G~~C~   57 (60)
                      +|...+ .|.+++|++  +.|.|.|++||.     |..|+
T Consensus         5 eC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~   44 (86)
T 1lmj_A            5 ECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM   44 (86)
T ss_dssp             TTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE
T ss_pred             cccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccC
Confidence            454332 277778986  778999999998     56663

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=96.22  E-value=0.0012  Score=33.96  Aligned_cols=27  Identities=30%  Similarity=0.840  Sum_probs=21.7

Q ss_pred             CCC-CeEEcC----CC-eEEeCCCcccCCCCcC
Q psy17083         33 CKH-GYCNGS----SW-QCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~~-g~C~~~----~~-~C~C~~g~~G~~C~~~   59 (60)
                      |+| |+|++.    .+ .|.|+++|+|..|+++
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~   35 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   35 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEESTTSCEE
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCCCcccccc
Confidence            775 689752    34 8999999999999865

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.21  E-value=0.0035  Score=38.78  Aligned_cols=22  Identities=32%  Similarity=0.671  Sum_probs=17.1

Q ss_pred             eEEcCCCeEEeCCCcccCCCCc
Q psy17083         37 YCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        37 ~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      .|....++|.|+++|.|..|++
T Consensus       454 ~Cd~~tg~C~C~~g~~G~~Ce~  475 (525)
T 4aqs_A          454 PCDSETGYCYCKRLVTGQRCDQ  475 (525)
T ss_dssp             CBCTTTCCBCBCTTCCSTTTCC
T ss_pred             cccCCCCEEECCCCCcCCCccc
Confidence            3443567899999999999963

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.01  E-value=0.0022  Score=29.03  Aligned_cols=17  Identities=29%  Similarity=0.669  Sum_probs=14.9

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        32 ~~~C~C~~Gf~G~~Ce~   48 (58)
T 3ltf_D           32 VYSCECAIGFMGQRCEY   48 (58)
T ss_dssp             EEEEEECTTEESSSSCE
T ss_pred             CEEeECCCCCccCCCcc
Confidence            35899999999999974

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=95.98  E-value=0.0042  Score=27.49  Aligned_cols=18  Identities=22%  Similarity=0.719  Sum_probs=15.4

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ....|.|++||+|.+|+.
T Consensus        28 ~~~~C~C~~gy~G~RCe~   45 (50)
T 3e50_C           28 DKPACVCHSGYVGARCEH   45 (50)
T ss_pred             CCeEEECCCCCcccCCCc
Confidence            346899999999999974

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=95.92  E-value=0.0015  Score=31.46  Aligned_cols=32  Identities=22%  Similarity=0.820  Sum_probs=21.6

Q ss_pred             CCCCCCC-CCCCeEEc--CCCeEEeCCCcc----cCCCC
Q psy17083         26 QCKPYPG-CKHGYCNG--SSWQCICDTNWG----GILCD   57 (60)
Q Consensus        26 ~c~~~~~-C~~g~C~~--~~~~C~C~~g~~----G~~C~   57 (60)
                      +|...|. |.+++|++  +.|.|.|++||.    |..|+
T Consensus         5 eC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~   43 (87)
T 1z6c_A            5 ECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE   43 (87)
T ss_dssp             SSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEE
T ss_pred             cccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCC
Confidence            3444442 54467765  678999999998    66663

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=95.91  E-value=0.0074  Score=31.97  Aligned_cols=27  Identities=30%  Similarity=0.840  Sum_probs=19.6

Q ss_pred             CCC-CeEEcC----CC-eEEeCCCcccCCCCcC
Q psy17083         33 CKH-GYCNGS----SW-QCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~~-g~C~~~----~~-~C~C~~g~~G~~C~~~   59 (60)
                      |+| |+|+..    .+ .|.|+++|.|..|+++
T Consensus        15 C~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~   47 (145)
T 2i9a_A           15 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   47 (145)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred             CCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence            775 688642    23 7889999999888764

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=95.54  E-value=0.011  Score=35.39  Aligned_cols=32  Identities=28%  Similarity=0.908  Sum_probs=26.1

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCC-CcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDT-NWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~-g~~G~~C~~   58 (60)
                      .|...| |.+ |+|++  ..+.|.|+. +|.|+.|+.
T Consensus       187 ~C~~~p-C~n~g~C~~~~~~~~C~C~~~~~~G~~C~~  222 (410)
T 3asi_A          187 TCQEDS-CSNQGVCLQQWDGFSCDCSMTSFSGPLCND  222 (410)
T ss_dssp             CCCTTS-SSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred             Cccccc-CCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence            466677 885 79987  678999996 999999975

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=95.18  E-value=0.0067  Score=39.46  Aligned_cols=44  Identities=20%  Similarity=0.678  Sum_probs=31.1

Q ss_pred             CCCeeEcCCCCc---CCCCC---CCCCCCCCCCCeEEc--CCCeEEeCCCccc
Q psy17083          9 IRASVQCRPGWR---GEFCD---QCKPYPGCKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus         9 ~~~~C~C~~g~~---g~~C~---~c~~~~~C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      ..|.|.|++||.   |..|+   +|.....|. ..|++  +.|.|.|++||..
T Consensus       331 ~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~l  382 (791)
T 3m0c_C          331 IGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL  382 (791)
T ss_dssp             BSEEEECCTTCEEETTTEEECCCCCSSSSSCT-TTCCBCSSCBCCCCCSSEEC
T ss_pred             CCcccCCCCCCccCCCCccccCcccCCCCCCC-CeeecCCCCceeecCCCCEe
Confidence            468999999995   67774   454222243 35765  7899999999964

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=94.73  E-value=0.026  Score=38.18  Aligned_cols=33  Identities=30%  Similarity=0.895  Sum_probs=26.7

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeC-CCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICD-TNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~-~g~~G~~C~~~   59 (60)
                      .|...| |.+ |+|..  ..+.|.|+ ++|.|+.|+.+
T Consensus      1019 ~C~~~p-C~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A         1019 TCQEDS-CSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp             CCCTTS-SSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred             ceECCc-CCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence            466677 885 79986  66899999 69999999764

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=94.56  E-value=0.031  Score=34.09  Aligned_cols=48  Identities=29%  Similarity=0.698  Sum_probs=33.2

Q ss_pred             CeeEcCCCCcCCCCCCCCCCC--------------CC---C-C--C-eEE------------------cCCCeEE-eCCC
Q psy17083         11 ASVQCRPGWRGEFCDQCKPYP--------------GC---K-H--G-YCN------------------GSSWQCI-CDTN   50 (60)
Q Consensus        11 ~~C~C~~g~~g~~C~~c~~~~--------------~C---~-~--g-~C~------------------~~~~~C~-C~~g   50 (60)
                      +.|.|..++.|.+|+.|....              .|   . +  + .|.                  ...+.|. |..+
T Consensus       286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n  365 (403)
T 2y38_A          286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH  365 (403)
T ss_dssp             EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred             eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence            569999999999999764310              12   2 2  2 463                  1357895 9999


Q ss_pred             cccCCCCc
Q psy17083         51 WGGILCDQ   58 (60)
Q Consensus        51 ~~G~~C~~   58 (60)
                      +.|..|++
T Consensus       366 t~G~~CEr  373 (403)
T 2y38_A          366 TTGINCER  373 (403)
T ss_dssp             EESTTSCE
T ss_pred             CcCCCCCc
Confidence            99999874

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=94.53  E-value=0.038  Score=23.84  Aligned_cols=20  Identities=20%  Similarity=0.788  Sum_probs=16.3

Q ss_pred             CCCCeEEc--CCCeEEeCCCccc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      |. .+|++  +.|.|.|++||.+
T Consensus        22 C~-~~C~n~~Gsy~C~C~~Gy~~   43 (53)
T 1apq_A           22 CQ-HLCHNYVGGYFCSCRPGYEL   43 (53)
T ss_dssp             TS-SEEEEETTEEEEECSTTCEE
T ss_pred             CC-CEeECCCCCeEEECCCCCeE
Confidence            65 47876  7799999999975

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=94.37  E-value=0.018  Score=27.78  Aligned_cols=17  Identities=41%  Similarity=0.958  Sum_probs=14.7

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        61 ~~~C~C~~GYtG~RCE~   77 (79)
T 1xdt_R           61 APSCICHPGYHGERCHG   77 (79)
T ss_dssp             BCCEEECTTEESTTCCE
T ss_pred             CeEEEcCCCcccccccc
Confidence            46799999999999963

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.25  E-value=0.018  Score=30.15  Aligned_cols=18  Identities=28%  Similarity=0.661  Sum_probs=15.8

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||.|..|+.
T Consensus       138 ~~~~c~C~~g~~G~~Ce~  155 (162)
T 1g1s_A          138 GNYTCSCYPGFYGPECEY  155 (162)
T ss_dssp             SSEEEEECTTEESTTSCE
T ss_pred             CCceEeCCCCCcCccccc
Confidence            468999999999999974

>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}

Probab=94.18  E-value=0.0048  Score=37.51  Aligned_cols=23  Identities=17%  Similarity=0.297  Sum_probs=20.4

Q ss_pred             CCCCCCccCCCeeEcCCCCcCCC
Q psy17083          1 MSNRLGRNIRASVQCRPGWRGEF   23 (60)
Q Consensus         1 ~~~~~g~~~~~~C~C~~g~~g~~   23 (60)
                      |+++||.++.+.|.|++||.|..
T Consensus       197 ~CsGhG~C~~g~C~Cd~G~~g~d  219 (387)
T 2ddu_A          197 YCSGHGDCISGVCFCDLGYTAAQ  219 (387)
T ss_dssp             GGGGSEEEETTEEEECTTEEEET
T ss_pred             ccCCCceecCCeEEecCCcccCC
Confidence            46789999999999999999975

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.75  E-value=0.011  Score=36.27  Aligned_cols=46  Identities=24%  Similarity=0.699  Sum_probs=4.1

Q ss_pred             CCeeE-cCCCCcCCCCCCCCCCCCCCC-CeEEcCCCeEEeCCCcccCCCCc
Q psy17083         10 RASVQ-CRPGWRGEFCDQCKPYPGCKH-GYCNGSSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        10 ~~~C~-C~~g~~g~~C~~c~~~~~C~~-g~C~~~~~~C~C~~g~~G~~C~~   58 (60)
                      .+.|+ |.-.+.|..|+.- ..+ |.+ |+|.+.. +|.|++||.|..|++
T Consensus       351 ~~~C~pC~Cn~~g~~CD~~-t~~-C~ngg~C~~~~-~C~C~~G~~G~~Ce~  398 (426)
T 3zyj_B          351 ANACIPSISSIGTNVCDNE-LLH-CQNGGTCHNNV-RCLCPAAYTGILCEK  398 (426)
T ss_dssp             CCCCCCCCC------------------------------------------
T ss_pred             CCcccCCCCCCCcCccccC-ccc-CCCCCCcCCCC-CCcCCCCCcCCCCcC
Confidence            45564 4445567778642 235 874 5788633 899999999988864

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=93.72  E-value=0.044  Score=37.15  Aligned_cols=32  Identities=34%  Similarity=0.972  Sum_probs=26.3

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeC-CCcccCCCCc
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICD-TNWGGILCDQ   58 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~-~g~~G~~C~~   58 (60)
                      .|...| |.+ |.|.+  ..+.|.|+ ++|.|..|+.
T Consensus       621 ~C~~~p-C~ngg~C~~~~~~~~C~C~~~g~~G~~C~~  656 (1245)
T 3qcw_A          621 PCLSNP-CKNNGMCRDGWNRYVCDCSGTGYLGRSCER  656 (1245)
T ss_dssp             GGGSCC-CCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred             CCCccC-CCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence            466677 984 79987  66899999 7999999975

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=92.79  E-value=0.038  Score=28.92  Aligned_cols=17  Identities=24%  Similarity=0.626  Sum_probs=15.2

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|.+||.|..|+.
T Consensus       139 ~~~c~C~~g~~g~~C~~  155 (164)
T 3cfw_A          139 NYTCNCDVGYYGPQCQF  155 (164)
T ss_dssp             EEEEEECTTCBSSSSCB
T ss_pred             CceeeeCCCcccccccc
Confidence            57999999999999974

>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*

Probab=92.58  E-value=0.037  Score=34.46  Aligned_cols=15  Identities=33%  Similarity=0.953  Sum_probs=5.0

Q ss_pred             CeEEeCCCcccCCCC
Q psy17083         43 WQCICDTNWGGILCD   57 (60)
Q Consensus        43 ~~C~C~~g~~G~~C~   57 (60)
                      +.|.|.+||.|..|+
T Consensus       458 G~C~C~~G~~G~~Ce  472 (472)
T 3t3p_B          458 GVCRCGPGWLGSQCE  472 (472)
T ss_dssp             TEEEECTTC------
T ss_pred             CceECcCCCCCCCCC
Confidence            455555555555553

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=90.95  E-value=0.12  Score=30.77  Aligned_cols=22  Identities=23%  Similarity=0.818  Sum_probs=17.7

Q ss_pred             CeEEc--CCCeEEeCCCcc---cCCCC
Q psy17083         36 GYCNG--SSWQCICDTNWG---GILCD   57 (60)
Q Consensus        36 g~C~~--~~~~C~C~~g~~---G~~C~   57 (60)
                      +.|++  +.|.|.|++||.   |..|+
T Consensus        12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~   38 (400)
T 3p5b_L           12 HVCNDLKIGYECLCPDGFQLVAQRRCE   38 (400)
T ss_dssp             SEEEECSSSEEEECCTTEEECSSSCEE
T ss_pred             CEeECCCCCeEEECCCCCCcCCCCccc
Confidence            47876  678999999998   67674

>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*

Probab=90.47  E-value=0.05  Score=34.15  Aligned_cols=21  Identities=29%  Similarity=0.620  Sum_probs=0.0

Q ss_pred             CCCccCCCeeEcCCCCcCCCC
Q psy17083          4 RLGRNIRASVQCRPGWRGEFC   24 (60)
Q Consensus         4 ~~g~~~~~~C~C~~g~~g~~C   24 (60)
                      .+|...-|.|.|.+||.|..|
T Consensus       472 g~G~~~CG~C~C~~G~~G~~C  492 (503)
T 3v4v_B          472 GQGHLQCGVCSCAPGRLGRLC  492 (503)
T ss_dssp             ---------------------
T ss_pred             CCeeEeCCceECcCCCcCCCC
Confidence            455555567777777777777

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=88.43  E-value=0.088  Score=31.12  Aligned_cols=20  Identities=35%  Similarity=0.856  Sum_probs=0.0

Q ss_pred             eEEc--CCCeEEeCCCcc----cCCC
Q psy17083         37 YCNG--SSWQCICDTNWG----GILC   56 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~----G~~C   56 (60)
                      .|.+  +.+.|.|++||.    |..|
T Consensus        16 ~C~~~~g~~~C~C~~G~~l~~~~~~C   41 (386)
T 3v65_B           16 KCQMIRGAVQCTCHTGYRLTEDGRTC   41 (386)
T ss_dssp             --------------------------
T ss_pred             CCcCCCCCcEeECCCCceECCCCCcc
Confidence            5654  568999999998    7777

>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*

Probab=88.43  E-value=0.29  Score=28.53  Aligned_cols=23  Identities=35%  Similarity=0.860  Sum_probs=19.0

Q ss_pred             CC-CCeEEcCCCeEEeCCCcccCCCC
Q psy17083         33 CK-HGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus        33 C~-~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      |. +|+|.-  +.|.|.+||.|..|+
T Consensus       198 C~g~G~~~C--G~C~C~~g~~G~~Ce  221 (280)
T 2p26_A          198 CHGKGFLEC--GICRCDTGYIGKNCE  221 (280)
T ss_dssp             GGGSEEEET--TEEEECTTEESTTSC
T ss_pred             cCCCCeECC--CceeCCCCCcCCcce
Confidence            55 577773  789999999999986

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=87.47  E-value=0.28  Score=28.76  Aligned_cols=24  Identities=33%  Similarity=0.966  Sum_probs=19.3

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcc--cCCC
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWG--GILC   56 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~--G~~C   56 (60)
                      |. ++.|++  ++|.|.|.+||.  |..|
T Consensus        15 C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C   43 (285)
T 1gl4_A           15 CSVHAECRDYATGFCCRCVANYTGNGRQC   43 (285)
T ss_dssp             SCTTEEEEECSSCEEEEECTTEEECSSSE
T ss_pred             CCCCCEeEcCCCCeEEEcCCCCCCCCCcC
Confidence            65 568887  889999999998  5556

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=87.44  E-value=0.44  Score=30.50  Aligned_cols=21  Identities=24%  Similarity=0.879  Sum_probs=16.3

Q ss_pred             eEEc--CCCeEEeCCCcc---cCCCC
Q psy17083         37 YCNG--SSWQCICDTNWG---GILCD   57 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~---G~~C~   57 (60)
                      .|++  +.|.|.|++||.   |..|+
T Consensus       307 ~C~~~~~~~~C~C~~G~~~~~~~~C~  332 (699)
T 1n7d_A          307 VCNDLKIGYECLCPDGFQLVAQRRCE  332 (699)
T ss_dssp             TCCCCTTCCCCCCCSSSCCCSSSCCC
T ss_pred             CcccCCCCcEEeCCCCeEcCCCCccc
Confidence            4654  679999999998   66674

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=86.15  E-value=0.35  Score=30.34  Aligned_cols=50  Identities=18%  Similarity=0.422  Sum_probs=29.6

Q ss_pred             CCCcc--CCCeeEcCCCCc--CCCCCCCCCC---CCCCCCeEE----------cCCCeEEeCCCccc
Q psy17083          4 RLGRN--IRASVQCRPGWR--GEFCDQCKPY---PGCKHGYCN----------GSSWQCICDTNWGG   53 (60)
Q Consensus         4 ~~g~~--~~~~C~C~~g~~--g~~C~~c~~~---~~C~~g~C~----------~~~~~C~C~~g~~G   53 (60)
                      .+|..  ..+.|.|.+||.  +..|+.|...   +....+.|.          .+.+.|.|..+|..
T Consensus       254 ~dG~w~~p~G~C~C~~G~e~~~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~r  320 (536)
T 3fl7_A          254 VDGEWLVPIGQCLCQAGYEKVEDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFR  320 (536)
T ss_dssp             TTSCBCCCBCCCEECTTEEEETTEEEECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBC
T ss_pred             CCCCEecccCcEeccCccccCCceeeecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccc
Confidence            44542  458999999997  4556555332   101122222          16678999998863

>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}

Probab=83.70  E-value=0.38  Score=30.18  Aligned_cols=23  Identities=22%  Similarity=0.491  Sum_probs=12.5

Q ss_pred             CCCc-cCCCeeEcCCCCcCCCCCC
Q psy17083          4 RLGR-NIRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         4 ~~g~-~~~~~C~C~~g~~g~~C~~   26 (60)
                      .||. +....|.|.+||..+.|+.
T Consensus       458 ~~GVCNn~~~CHC~~GwaPP~C~~  481 (510)
T 3g5c_A          458 GNGVCSNELKCVCNRHWIGSDCNT  481 (510)
T ss_dssp             GTEEEBTTSCEEECTTEESTTSCE
T ss_pred             CCCeeCCCCCcCCCCCCCCCCCCC
Confidence            3443 2344566666666666653

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=82.70  E-value=0.42  Score=30.52  Aligned_cols=17  Identities=29%  Similarity=0.759  Sum_probs=15.3

Q ss_pred             CCeeEcC-CCCcCCCCCC
Q psy17083         10 RASVQCR-PGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~-~g~~g~~C~~   26 (60)
                      .|.|.|+ +||+|.+|+.
T Consensus        22 ~y~C~C~~~G~~G~~Ce~   39 (587)
T 3nt1_A           22 QYKCDCTRTGFYGENCTT   39 (587)
T ss_dssp             EEEEECTTSSEETTTTCE
T ss_pred             CeEEecCCCCccCCCCCC
Confidence            5899999 9999999973

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=82.29  E-value=0.54  Score=20.49  Aligned_cols=19  Identities=26%  Similarity=0.934  Sum_probs=14.8

Q ss_pred             CCCCeEEc--CCCeEEeCCCcc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~   52 (60)
                      |.+ .|++  ++|.|.|++||.
T Consensus        11 C~~-~C~nt~Gsy~C~C~~Gy~   31 (55)
T 2jkh_L           11 CDQ-FCHEEQNSVVCSCARGYT   31 (55)
T ss_dssp             CSS-EEEEETTEEEEECCTTEE
T ss_pred             cCc-EeEcCCCCeEEeCCCCCE
Confidence            543 6775  778999999996

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=82.15  E-value=0.45  Score=30.06  Aligned_cols=17  Identities=29%  Similarity=0.747  Sum_probs=15.4

Q ss_pred             CCeeEcC-CCCcCCCCCC
Q psy17083         10 RASVQCR-PGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~-~g~~g~~C~~   26 (60)
                      .|.|.|+ +||+|.+|+.
T Consensus        23 ~y~C~C~~~G~~G~~Ce~   40 (553)
T 1q4g_A           23 RYQCDCTRTGYSGPNCTI   40 (553)
T ss_dssp             EEEEECTTSSEETTTTCE
T ss_pred             ceEeeCCCCCcCCCCCCC
Confidence            5899999 9999999974

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=81.55  E-value=1.1  Score=29.41  Aligned_cols=21  Identities=24%  Similarity=0.879  Sum_probs=16.3

Q ss_pred             eEEc--CCCeEEeCCCcc---cCCCC
Q psy17083         37 YCNG--SSWQCICDTNWG---GILCD   57 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~---G~~C~   57 (60)
                      .|++  +.|.|.|++||.   |..|+
T Consensus       325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~  350 (791)
T 3m0c_C          325 VCNDLKIGYECLCPDGFQLVAQRRCE  350 (791)
T ss_dssp             EEEECSBSEEEECCTTCEEETTTEEE
T ss_pred             cccCCCCCcccCCCCCCccCCCCccc
Confidence            6775  678999999995   66663

>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*

Probab=80.95  E-value=1.1  Score=29.90  Aligned_cols=26  Identities=23%  Similarity=0.603  Sum_probs=14.2

Q ss_pred             CC-CCeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         33 CK-HGYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~-~g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      |. +|.++.  ....|.|+++|.|..|+.
T Consensus       505 C~ngg~~~l~g~~C~C~C~~g~~G~~Ce~  533 (913)
T 3t5o_A          505 CPNNGRPTLSGTECLCVCQSGTYGENCEK  533 (913)
T ss_dssp             BTTTBEEEEETTEEEEECCTTBCSTTSCC
T ss_pred             CCCCCEeecCCCceEEEccCCccccCccC
Confidence            65 345542  233456666666666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	60
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	99.03
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.92
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.91
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.85
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	98.83
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.77
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.75
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.67
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.65
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.55
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	98.25
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	98.24
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.24
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	98.19
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	98.15
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	98.06
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	97.99
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	97.87
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	97.81
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.43
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.38
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.37
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.33
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.32
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	97.25
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.23
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.22
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	97.18
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	97.15
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.15
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.15
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.08
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.97
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.96
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.7
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.57
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.51
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.49
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.44
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.3
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.27
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	96.27
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	96.24
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.15
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	95.95
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.73
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	95.31
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.04
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	93.64
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	92.23
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	91.62
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	91.44
d1nt0a3	45	Mannose-binding protein associated serine protease	91.34
d1szba2	45	Mannose-binding protein associated serine protease	89.91
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	89.4
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	88.02

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=9e-11  Score=51.30  Aligned_cols=34  Identities=32%  Similarity=0.940  Sum_probs=30.3

Q ss_pred             CCCCCCCCCCCeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083         26 QCKPYPGCKHGYCNG--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        26 ~c~~~~~C~~g~C~~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      .|..+| |.||+|++  +.|.|.|++||.|..|+++|
T Consensus        10 ~C~~~P-C~nG~C~~~~~~y~C~C~~G~~G~~Ce~~I   45 (48)
T d1autl1          10 PCASLC-CGHGTCIDGIGSFSCDCRSGWEGRFCQREV   45 (48)
T ss_dssp             SSSSTT-TTSEEECCCSSCCCEEECTTEESTTSCEEC
T ss_pred             cccCCC-CCCCEEECCCCCCeEeCCCCCcCCCccccc
Confidence            577788 99999987  77999999999999999876

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=5.8e-10  Score=46.75  Aligned_cols=34  Identities=29%  Similarity=0.854  Sum_probs=28.8

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      +|...| |.+ |+|++  ..|+|.|++||+|..|++++
T Consensus         2 ~C~~~P-C~ngg~C~~~~~~y~C~C~~G~~G~~Cei~~   38 (39)
T d1xkba1           2 QCETSP-CQNQGKCKDGLGEYTCTCLEGFEGKNCELFT   38 (39)
T ss_dssp             TTTTCC-CCSSCEECCCSSSCCEECCTTEETTTTCEES
T ss_pred             cCCCCC-CCCCcEEECCCCCEEEECCCCCCcCcCeEcc
Confidence            567788 995 79987  77999999999999998753

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=5.9e-10  Score=46.71  Aligned_cols=34  Identities=29%  Similarity=0.953  Sum_probs=29.0

Q ss_pred             CCCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         25 DQCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        25 ~~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      ++|...| |.+ |+|++  +.|+|.|++||.|..|+.+
T Consensus         2 d~C~~~P-C~n~g~C~~~~~~y~C~C~~G~~G~~Ce~d   38 (39)
T d2vj3a2           2 NECVSNP-CQNDATCLDQIGEFQCICMPGYEGVHCEVN   38 (39)
T ss_dssp             CTTTTCC-CCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             cCCcCCC-CCCCCEEECCCCCEEEeCCCCCccCcCeeC
Confidence            3577788 985 79997  7799999999999999875

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.3e-10  Score=47.15  Aligned_cols=34  Identities=32%  Similarity=0.908  Sum_probs=28.8

Q ss_pred             CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcCC
Q psy17083         26 QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        26 ~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~~   60 (60)
                      .|..+| |. +|+|++  +.|.|.|++||.|..|+.+|
T Consensus         3 ~C~~~p-C~ngg~C~~~~~~~~C~C~~g~~G~~Ce~~v   39 (39)
T d1g1ta2           3 ACTNTS-CSGHGECVETINNYTCKCDPGFSGLKCEQIV   39 (39)
T ss_dssp             CCCTTG-GGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred             cccCCc-CCCCcEEECCCCCEEEeCCCCCcCcCcCccC
Confidence            366777 98 479987  77899999999999999876

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=2.6e-09  Score=45.11  Aligned_cols=33  Identities=27%  Similarity=0.773  Sum_probs=27.3

Q ss_pred             CCCCCCCCC-CeEEc----CCCeEEeCCCcccCCCCcCC
Q psy17083         27 CKPYPGCKH-GYCNG----SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        27 c~~~~~C~~-g~C~~----~~~~C~C~~g~~G~~C~~~~   60 (60)
                      |..+| |.| |+|++    ..|.|.|++||.|..|+.++
T Consensus         1 C~~nP-C~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce~~~   38 (41)
T d1tpga1           1 CSEPR-CFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT   38 (41)
T ss_dssp             CSSCC-SCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred             CcCCC-CCCCCEEecCCCCCCeEECCCCCCCCCCcCcCc
Confidence            45677 985 79985    46899999999999999875

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=5e-09  Score=42.85  Aligned_cols=31  Identities=42%  Similarity=1.084  Sum_probs=26.7

Q ss_pred             CCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCC
Q psy17083         26 QCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCD   57 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~   57 (60)
                      +|.+.| |.+ |+|++  ..|+|.|+++|.|..|+
T Consensus         2 ~C~~~P-C~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           2 ECASSP-CLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             TTTTCC-STTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCC-CCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            467788 985 79987  67999999999999986

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=5.3e-09  Score=43.70  Aligned_cols=33  Identities=36%  Similarity=0.998  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCCc
Q psy17083         25 DQCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        25 ~~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~~   58 (60)
                      ++|...| |.+ |+|++  +.|+|.|++||.|+.|+.
T Consensus         4 d~C~~~P-C~ngg~C~~~~~~y~C~C~~g~~G~~Cei   39 (39)
T d1edmb_           4 DQCESNP-CLNGGSCKDDINSYECWCPFGFEGKNCEL   39 (39)
T ss_dssp             CTTTTCC-CCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred             ccCCCCC-CCCCcEEEcCCCCEEEECCCCCCCCCCCC
Confidence            3577788 985 79987  779999999999999973

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.67  E-value=6.1e-09  Score=43.06  Aligned_cols=32  Identities=38%  Similarity=1.025  Sum_probs=26.9

Q ss_pred             CCCCCCCCCCC-CeEEc--CCCeEEeCCCcccCCCC
Q psy17083         25 DQCKPYPGCKH-GYCNG--SSWQCICDTNWGGILCD   57 (60)
Q Consensus        25 ~~c~~~~~C~~-g~C~~--~~~~C~C~~g~~G~~C~   57 (60)
                      +.|...| |.+ |+|++  ..|+|.|++||+|..|+
T Consensus         3 d~C~~~P-C~ngg~C~~~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           3 DQCASSP-CQNGGSCKDQLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             CGGGGCC-CCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred             ccCCCCC-CCCCCEEECCCCCeEEECCCCCcCCCCC
Confidence            3567788 984 79987  77999999999999986

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.7e-08  Score=42.69  Aligned_cols=30  Identities=30%  Similarity=0.829  Sum_probs=25.5

Q ss_pred             CCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         29 PYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        29 ~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      ..| |. +|+|++  +.|+|.|++||+|..|++|
T Consensus        10 ~~p-C~n~g~C~n~~g~y~C~C~~G~~G~~Ce~d   42 (42)
T d2vj3a1          10 ANP-CEHAGKCINTLGSFECQCLQGYTGPRCEID   42 (42)
T ss_dssp             SCS-SSTTCEEEECSSSEEEECCTTEESTTSCEE
T ss_pred             CCC-CCCCcEeECCCCCEEeECCCCCcCCCCcCc
Confidence            456 88 579997  7799999999999999864

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.5e-08  Score=42.48  Aligned_cols=33  Identities=24%  Similarity=0.721  Sum_probs=27.3

Q ss_pred             CCCCCCCCC-CCeEEc--CCCeEEeCCCcccCCCCcC
Q psy17083         26 QCKPYPGCK-HGYCNG--SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~-~g~C~~--~~~~C~C~~g~~G~~C~~~   59 (60)
                      .|..+| |. +|+|++  +.++|.|++||.|+.|+..
T Consensus         3 ~C~~~p-C~ngg~C~~~~~~y~C~C~~g~~G~~Ce~~   38 (40)
T d1g1sa2           3 SCQDMS-CSKQGECLETIGNYTCSCYPGFYGPECEYV   38 (40)
T ss_dssp             CCCTTG-GGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred             cccCCc-CCCCcEEECCCCCeEEeCCCCccCCCCCCC
Confidence            356677 98 579987  7799999999999999853

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=1.1e-06  Score=38.58  Aligned_cols=34  Identities=26%  Similarity=0.653  Sum_probs=27.2

Q ss_pred             CCCCCCCCCCCC-CeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         24 CDQCKPYPGCKH-GYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        24 C~~c~~~~~C~~-g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |..+...+ |.| |+|..    ..++|.|+++|+|..|+.
T Consensus         6 C~~c~~~~-C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_           6 CPSSYDGY-CLNGGVCMHIESLDSYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CCTTSSCC-SCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred             CCCCCCCC-CCCCcEeeccCCCCCeEeECCCCCcCCCCcc
Confidence            44566667 986 89974    568999999999999985

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=4.9e-07  Score=37.86  Aligned_cols=33  Identities=30%  Similarity=0.825  Sum_probs=26.3

Q ss_pred             CCCCCCCCCC-CeEEc---CCCeEEeC-CCcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG---SSWQCICD-TNWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~---~~~~C~C~-~g~~G~~C~~~   59 (60)
                      .|...| |+| |+|+.   ..|+|.|+ ++|.|..|++.
T Consensus         3 ~C~~~P-C~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce~p   40 (41)
T d1cvua2           3 PCCSNP-CQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (41)
T ss_dssp             TTTTCC-CCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             cCcCCC-CCCCCEEEECCCCCEEEeCcCCCcCCcCcCcC
Confidence            466778 995 79975   56899996 69999999863

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.24  E-value=2.8e-07  Score=38.80  Aligned_cols=33  Identities=36%  Similarity=0.949  Sum_probs=26.3

Q ss_pred             CCCCCCCCCC-CeEEc---CCCeEEeCC-CcccCCCCcC
Q psy17083         26 QCKPYPGCKH-GYCNG---SSWQCICDT-NWGGILCDQG   59 (60)
Q Consensus        26 ~c~~~~~C~~-g~C~~---~~~~C~C~~-g~~G~~C~~~   59 (60)
                      .|..+| |+| |+|+.   ..|+|.|+. ||.|..|++.
T Consensus         4 ~C~~nP-C~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~p   41 (42)
T d1q4ga2           4 PCCYYP-CQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (42)
T ss_dssp             GGGGCC-CCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             cCcCCC-CCCCCEeeeCCCCCEEEECCCCCcCCcCcCcC
Confidence            466778 995 79975   568999986 8999999863

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2e-07  Score=42.37  Aligned_cols=37  Identities=24%  Similarity=0.595  Sum_probs=28.1

Q ss_pred             CCCCCCCCCCCCC-CeEEc-------CCCeEEeCCCcccCCCCcCC
Q psy17083         23 FCDQCKPYPGCKH-GYCNG-------SSWQCICDTNWGGILCDQGH   60 (60)
Q Consensus        23 ~C~~c~~~~~C~~-g~C~~-------~~~~C~C~~g~~G~~C~~~~   60 (60)
                      .|.+|..+| |.| |+|..       ..+.|.|++||+|..|+.+|
T Consensus         5 ~c~ec~~~~-C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce~~~   49 (63)
T d1haea_           5 KCAEKEKTF-CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV   49 (63)
T ss_dssp             ECCHHHHTT-SCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred             cCCCCcCCc-CCCCCEEeecccccCCCCEEeECCCCCCCCCcCCCC
Confidence            355566677 986 79952       46799999999999998653

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=7.1e-07  Score=38.50  Aligned_cols=34  Identities=26%  Similarity=0.613  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCCC-CeEEc----CCCeEEeCCCcccCCCCc
Q psy17083         24 CDQCKPYPGCKH-GYCNG----SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        24 C~~c~~~~~C~~-g~C~~----~~~~C~C~~g~~G~~C~~   58 (60)
                      |..+...+ |.| |+|..    ..+.|.|+.+|+|..|+.
T Consensus         4 C~~c~~~~-C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_           4 CPLSHDGY-CLHDGVCMYIEALDKYACNCVVGYIGERCQY   42 (48)
T ss_dssp             CCSTTCCE-ECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             CCCCCCCC-CCCCcEEeeeCCCCCeEEeCCCCcccCCCCc
Confidence            44455666 886 89963    458999999999999974

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=7.6e-07  Score=34.68  Aligned_cols=24  Identities=25%  Similarity=0.699  Sum_probs=21.6

Q ss_pred             CCCCCCccCCCeeEcCCCCcCCCC
Q psy17083          1 MSNRLGRNIRASVQCRPGWRGEFC   24 (60)
Q Consensus         1 ~~~~~g~~~~~~C~C~~g~~g~~C   24 (60)
                      |.+.||.+.-+.|+|.++|+|.+|
T Consensus         4 ~C~ghG~C~CG~C~C~~gw~G~~C   27 (31)
T d1jv2b4           4 MCSGHGQCSCGDCLCDSDWTGYYC   27 (31)
T ss_dssp             CSCCCTTCCSTTTCCCTTEESSSS
T ss_pred             eccCCCcccCCceEccCCcccccc
Confidence            578899999999999999999988

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=4.6e-06  Score=35.59  Aligned_cols=35  Identities=29%  Similarity=0.630  Sum_probs=26.4

Q ss_pred             CCCCCCCCCCCCCeEEc----CCCeEEeCCCcccCCCCcC
Q psy17083         24 CDQCKPYPGCKHGYCNG----SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        24 C~~c~~~~~C~~g~C~~----~~~~C~C~~g~~G~~C~~~   59 (60)
                      |..+...+ |.||.|..    ..+.|+|++||+|..|+.-
T Consensus         6 C~~~~~~y-C~nG~C~~~~~~~~~~C~C~~gY~G~RCe~~   44 (46)
T d1k36a_           6 CSSDMNGY-CLHGQCIYLVDMSQNYCRCEVGYTGVRCEHF   44 (46)
T ss_dssp             CCTTCCSS-CSSEEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred             CCCcCCCc-CcCCEEEEeCCCCccEeECCCCceecCceee
Confidence            44444455 99998852    4578999999999999853

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=2.8e-06  Score=35.77  Aligned_cols=26  Identities=31%  Similarity=0.743  Sum_probs=19.7

Q ss_pred             CCCCCccCCCeeEc-CCCCcCCCCCCC
Q psy17083          2 SNRLGRNIRASVQC-RPGWRGEFCDQC   27 (60)
Q Consensus         2 ~~~~g~~~~~~C~C-~~g~~g~~C~~c   27 (60)
                      .+.||.++-+.|+| .++|.|++|++|
T Consensus        13 Cng~G~C~cG~C~C~~~gy~G~~Ce~C   39 (43)
T d1jv2b5          13 CSGRGKCECGSCVCIQPGSYGDTCEKC   39 (43)
T ss_dssp             GGGTEEEETTEEEECCSSCBSTTSCBC
T ss_pred             ECCCCEEECCEeEeCCCCccCCccccC
Confidence            45677777788888 468888888775

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1e-06  Score=36.87  Aligned_cols=21  Identities=29%  Similarity=0.770  Sum_probs=12.1

Q ss_pred             CCccCCCeeEcCCCCcCCCCC
Q psy17083          5 LGRNIRASVQCRPGWRGEFCD   25 (60)
Q Consensus         5 ~g~~~~~~C~C~~g~~g~~C~   25 (60)
                      ||.+..++|+|.+||+|+.|+
T Consensus        20 hG~C~~G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          20 RGLCFCGKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HEEEETTEEEECTTCCTTTTC
T ss_pred             CCeEECCEEEcCCCCcccCcc
Confidence            455555566666666665553

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2.6e-05  Score=32.02  Aligned_cols=18  Identities=28%  Similarity=0.674  Sum_probs=15.9

Q ss_pred             cCCCeeEcCCCCcCCCCC
Q psy17083          8 NIRASVQCRPGWRGEFCD   25 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~   25 (60)
                      ...|+|.|++||+|.+|+
T Consensus        19 ~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2          19 IGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             SSCEEEECCTTEESSSSC
T ss_pred             CCCEEEeCCCCCccCcCe
Confidence            356899999999999996

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=3.8e-05  Score=31.49  Aligned_cols=17  Identities=24%  Similarity=0.561  Sum_probs=15.4

Q ss_pred             CCCeeEcCCCCcCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCD   25 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~   25 (60)
                      ..|+|.|++||+|.+|+
T Consensus        22 ~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_          22 NSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TEEEEECCTTCCSTTSC
T ss_pred             CCEEEECCCCCCCCCCC
Confidence            56899999999999996

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=3.9e-05  Score=31.85  Aligned_cols=18  Identities=28%  Similarity=0.549  Sum_probs=15.8

Q ss_pred             cCCCeeEcCCCCcCCCCC
Q psy17083          8 NIRASVQCRPGWRGEFCD   25 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~   25 (60)
                      ...|+|.|++||+|++|+
T Consensus        23 ~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1          23 LGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             SSSEEEECCTTEESTTSC
T ss_pred             CCCEEeECCCCCcCCCCc
Confidence            356899999999999996

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=4.8e-05  Score=31.20  Aligned_cols=18  Identities=22%  Similarity=0.565  Sum_probs=15.9

Q ss_pred             cCCCeeEcCCCCcCCCCC
Q psy17083          8 NIRASVQCRPGWRGEFCD   25 (60)
Q Consensus         8 ~~~~~C~C~~g~~g~~C~   25 (60)
                      ...|.|.|++||+|.+|+
T Consensus        18 ~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1          18 LGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             SSSCCEECCTTEETTTTC
T ss_pred             CCCEEEECCCCCCcCcCe
Confidence            356899999999999997

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.32  E-value=3.8e-05  Score=31.14  Aligned_cols=17  Identities=24%  Similarity=0.604  Sum_probs=15.2

Q ss_pred             CCCeeEcCCCCcCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCD   25 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~   25 (60)
                      ..|.|.|++||+|.+|+
T Consensus        21 ~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1          21 QSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             TEEEEECCTTEESTTSC
T ss_pred             CCeEEECCCCCcCCCCC
Confidence            46899999999999985

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=9.5e-05  Score=30.62  Aligned_cols=25  Identities=36%  Similarity=0.905  Sum_probs=21.2

Q ss_pred             CCCCeEEc----CCCeEEeCCCcccCCCC
Q psy17083         33 CKHGYCNG----SSWQCICDTNWGGILCD   57 (60)
Q Consensus        33 C~~g~C~~----~~~~C~C~~g~~G~~C~   57 (60)
                      |.||.|.-    ....|+|+.||+|..|+
T Consensus        10 CihG~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_          10 CIHGECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             CSSEEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             eECcEEeecCcCCCceeECCCCCeecCcc
Confidence            78888853    56789999999999996

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=6.3e-05  Score=30.11  Aligned_cols=17  Identities=24%  Similarity=0.770  Sum_probs=15.3

Q ss_pred             CCCeeEcCCCCcCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCD   25 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~   25 (60)
                      ..|+|.|+++|+|.+|+
T Consensus        19 ~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3          19 NEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             SCEEEECCTTEESSSSC
T ss_pred             CCeEEECCCCCCCCCcC
Confidence            46899999999999985

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=9.8e-05  Score=30.49  Aligned_cols=18  Identities=28%  Similarity=0.636  Sum_probs=15.6

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|.+|+.
T Consensus        19 ~~y~C~C~~g~~G~~Ce~   36 (41)
T d1tpga1          19 SDFVCQCPEGFAGKSCEI   36 (41)
T ss_dssp             SCEEEECCTTCBSSSCCB
T ss_pred             CCeEECCCCCCCCCCcCc
Confidence            357999999999999974

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00018  Score=29.05  Aligned_cols=27  Identities=30%  Similarity=0.820  Sum_probs=21.7

Q ss_pred             CCC-CeEEc-----CCCeEEeCCCcccCCCCcC
Q psy17083         33 CKH-GYCNG-----SSWQCICDTNWGGILCDQG   59 (60)
Q Consensus        33 C~~-g~C~~-----~~~~C~C~~g~~G~~C~~~   59 (60)
                      |.+ |+|+.     .-..|.||.+|.|..|+.|
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCEiD   36 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID   36 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCceeEEec
Confidence            664 68985     3358999999999999876

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00012  Score=30.35  Aligned_cols=21  Identities=29%  Similarity=0.816  Sum_probs=19.0

Q ss_pred             CCeEEcCCCeEEeCCCcccCCCC
Q psy17083         35 HGYCNGSSWQCICDTNWGGILCD   57 (60)
Q Consensus        35 ~g~C~~~~~~C~C~~g~~G~~C~   57 (60)
                      +|+|+.  +.|.|.++|+|+.|+
T Consensus        20 hG~C~~--G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          20 RGLCFC--GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HEEEET--TEEEECTTCCTTTTC
T ss_pred             CCeEEC--CEEEcCCCCcccCcc
Confidence            689985  799999999999997

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=8e-05  Score=30.63  Aligned_cols=18  Identities=28%  Similarity=0.661  Sum_probs=16.0

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|++|+.
T Consensus        20 ~~y~C~C~~g~~G~~Ce~   37 (40)
T d1g1sa2          20 GNYTCSCYPGFYGPECEY   37 (40)
T ss_dssp             SSEEEEECTTEESTTSCE
T ss_pred             CCeEEeCCCCccCCCCCC
Confidence            568999999999999974

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=5.3e-05  Score=31.04  Aligned_cols=18  Identities=33%  Similarity=0.824  Sum_probs=15.8

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|.+|++
T Consensus        20 ~~~~C~C~~g~~G~~Ce~   37 (39)
T d1g1ta2          20 NNYTCKCDPGFSGLKCEQ   37 (39)
T ss_dssp             TEEEEEECTTEESTTSCE
T ss_pred             CCEEEeCCCCCcCcCcCc
Confidence            458999999999999974

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0001  Score=31.46  Aligned_cols=18  Identities=44%  Similarity=1.143  Sum_probs=16.0

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..|.|.|++||+|.+|+.
T Consensus        26 ~~y~C~C~~G~~G~~Ce~   43 (48)
T d1autl1          26 GSFSCDCRSGWEGRFCQR   43 (48)
T ss_dssp             SCCCEEECTTEESTTSCE
T ss_pred             CCCeEeCCCCCcCCCccc
Confidence            468999999999999974

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00022  Score=30.66  Aligned_cols=26  Identities=27%  Similarity=0.698  Sum_probs=20.3

Q ss_pred             CCCC-eEEc---CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHG-YCNG---SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g-~C~~---~~~~C~C~~g~~G~~C~~   58 (60)
                      |.|| .|..   ....|+|+.+|+|..|+.
T Consensus        16 C~nGgcc~~~~~~~~~C~C~~gy~G~rCe~   45 (50)
T d1ioxa_          16 CIKGRCRFVVAEQTPSCVCDEGYIGARCER   45 (50)
T ss_dssp             CTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred             ccCCeEEEeCCCCCcEeECCCCCeeCCCcc
Confidence            8875 5533   457899999999999974

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00041  Score=29.62  Aligned_cols=26  Identities=31%  Similarity=0.896  Sum_probs=20.1

Q ss_pred             CCCCeEE-c---CCCeEEeCCCcccCCCCc
Q psy17083         33 CKHGYCN-G---SSWQCICDTNWGGILCDQ   58 (60)
Q Consensus        33 C~~g~C~-~---~~~~C~C~~g~~G~~C~~   58 (60)
                      |.||.|. .   ....|.|+.||+|..|+.
T Consensus        15 ClnGgcc~~~~~~~~~C~C~~gy~G~RCe~   44 (49)
T d1moxc_          15 CFHGTCRFLVQEDKPACVCHSGYVGARCEH   44 (49)
T ss_dssp             STTEEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred             eeCCeEEecCCCCCcEeECCCCCEecCCcc
Confidence            7876442 2   457899999999999974

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00057  Score=28.52  Aligned_cols=30  Identities=30%  Similarity=0.846  Sum_probs=21.7

Q ss_pred             CCCCCCC-CCCCCeEEc--CCCeEEeCCCcccC
Q psy17083         25 DQCKPYP-GCKHGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus        25 ~~c~~~~-~C~~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      ++|...+ .|.++.|++  ++|.|.|++||.+.
T Consensus         4 dEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             CTTTTCSSTTTTSCEEEETTEEEECCCSSEEEC
T ss_pred             cccCCCCCCCCCCEeEcCCCCeEEeCCCCCccC
Confidence            3454332 266778987  88999999999765

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00042  Score=28.75  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=18.5

Q ss_pred             CCCCCCCCCCCeEEc--CCCeEEeCCCcc
Q psy17083         26 QCKPYPGCKHGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        26 ~c~~~~~C~~g~C~~--~~~~C~C~~g~~   52 (60)
                      +|...+.+.+++|++  ++|.|.|++||.
T Consensus         7 EC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~   35 (43)
T d1emoa1           7 ECKEPDVCKHGQCINTDGSYRCECPFGYI   35 (43)
T ss_dssp             SSSSTTSCSSSCCCCCSSCCCCCCCTTEE
T ss_pred             ccCCcCCCCCCEeECCCCCeEeECCCCcc
Confidence            454333233567776  889999999996

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.00074  Score=29.16  Aligned_cols=17  Identities=24%  Similarity=0.700  Sum_probs=15.4

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|+++|+|.+|+.
T Consensus        28 ~~~C~C~~gy~G~~Ce~   44 (53)
T d3egfa_          28 SYTCNCVIGYSGDRCQT   44 (53)
T ss_dssp             CEEEECCTTCCSSSSCC
T ss_pred             CeEeECCCCCcCCCCcc
Confidence            57999999999999974

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00054  Score=30.50  Aligned_cols=18  Identities=33%  Similarity=0.875  Sum_probs=15.7

Q ss_pred             CCCeeEcCCCCcCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQ   26 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~   26 (60)
                      ..+.|.|++||+|.+|+.
T Consensus        30 ~~y~C~C~~gy~G~~Ce~   47 (63)
T d1haea_          30 SRYLCKCQPGFTGARCTE   47 (63)
T ss_dssp             CCEEEECCTTEESTTSCE
T ss_pred             CCEEeECCCCCCCCCcCC
Confidence            357899999999999984

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00091  Score=27.60  Aligned_cols=28  Identities=25%  Similarity=0.648  Sum_probs=20.1

Q ss_pred             CCCCCCCCCCCeEEc--CCCeEEeCCCccc
Q psy17083         26 QCKPYPGCKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        26 ~c~~~~~C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      +|.....+.++.|++  +.|.|.|++||..
T Consensus         5 EC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l   34 (43)
T d1uzka1           5 ECLDPTTCISGNCVNTPGSYICDCPPDFEL   34 (43)
T ss_dssp             GGGSTTSSBTSEEEEETTEEEEECCTTCEE
T ss_pred             ccCCCCcCcCCEeECCCCCEEEecCCCCEE
Confidence            454433344678987  8899999999953

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.00085  Score=28.24  Aligned_cols=17  Identities=24%  Similarity=0.751  Sum_probs=15.0

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|++||+|.+|+.
T Consensus        27 ~~~C~C~~gY~G~RCe~   43 (46)
T d1k36a_          27 QNYCRCEVGYTGVRCEH   43 (46)
T ss_dssp             EEEEEECTTCSSTTSCC
T ss_pred             ccEeECCCCceecCcee
Confidence            46899999999999974

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.001  Score=27.38  Aligned_cols=21  Identities=29%  Similarity=0.849  Sum_probs=18.0

Q ss_pred             CCCCeEEc--CCCeEEeCCCccc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      |.++.|++  ++|.|.|++||..
T Consensus        12 C~~~~C~Nt~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2          12 CRGGVCHNTEGSYRCECPPGHQL   34 (42)
T ss_dssp             TTTSEEEEETTEEEEESCTTSCC
T ss_pred             CCCCEeECCCCCeEEeCCCCCeE
Confidence            66789987  8899999999973

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0018  Score=26.83  Aligned_cols=24  Identities=29%  Similarity=0.778  Sum_probs=19.8

Q ss_pred             CC-CCeEEcCCCeEEeC-CCcccCCCCc
Q psy17083         33 CK-HGYCNGSSWQCICD-TNWGGILCDQ   58 (60)
Q Consensus        33 C~-~g~C~~~~~~C~C~-~g~~G~~C~~   58 (60)
                      |. +|+|+-  ++|+|. ++|.|+.|+.
T Consensus        13 Cng~G~C~c--G~C~C~~~gy~G~~Ce~   38 (43)
T d1jv2b5          13 CSGRGKCEC--GSCVCIQPGSYGDTCEK   38 (43)
T ss_dssp             GGGTEEEET--TEEEECCSSCBSTTSCB
T ss_pred             ECCCCEEEC--CEeEeCCCCccCCcccc
Confidence            65 688985  899995 6999999974

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.24  E-value=0.0012  Score=26.98  Aligned_cols=20  Identities=30%  Similarity=0.795  Sum_probs=16.1

Q ss_pred             CCeEEc--CCCeEEeCCCcccC
Q psy17083         35 HGYCNG--SSWQCICDTNWGGI   54 (60)
Q Consensus        35 ~g~C~~--~~~~C~C~~g~~G~   54 (60)
                      +..|++  ++|.|.|++||.|.
T Consensus        12 ~A~C~Nt~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2          12 HAECRDYATGFCCRCVANYTGN   33 (40)
T ss_dssp             TEEEEECSSCEEEEECTTEEEC
T ss_pred             CCEeecCCCCeEeECCCCCcCC
Confidence            457776  78999999999753

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.00089  Score=28.33  Aligned_cols=17  Identities=29%  Similarity=0.706  Sum_probs=15.1

Q ss_pred             CCeeEcCCCCcCCCCCC
Q psy17083         10 RASVQCRPGWRGEFCDQ   26 (60)
Q Consensus        10 ~~~C~C~~g~~g~~C~~   26 (60)
                      .+.|.|+++|+|.+|+.
T Consensus        26 ~~~C~C~~gy~G~~Ce~   42 (48)
T d1nqlb_          26 KYACNCVVGYIGERCQY   42 (48)
T ss_dssp             EEEEEECTTEESTTSCE
T ss_pred             CeEEeCCCCcccCCCCc
Confidence            47999999999999974

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.95  E-value=0.00099  Score=28.46  Aligned_cols=22  Identities=32%  Similarity=0.738  Sum_probs=18.8

Q ss_pred             CCCeeEcCCCCcCCCCCCCCCC
Q psy17083          9 IRASVQCRPGWRGEFCDQCKPY   30 (60)
Q Consensus         9 ~~~~C~C~~g~~g~~C~~c~~~   30 (60)
                      .++.|.|.+++.|.+|+.|+..
T Consensus        18 ~tGqC~Ck~~v~G~~Cd~C~~g   39 (51)
T d1kloa3          18 VTGQCQCLPHVSGRDCGTCDPG   39 (51)
T ss_dssp             TTCCCCBCTTEESTTCCEECTT
T ss_pred             CCCeecCCCCCcCCCccccccc
Confidence            5689999999999999987653

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.0028  Score=26.10  Aligned_cols=21  Identities=38%  Similarity=0.835  Sum_probs=17.4

Q ss_pred             CCCCeEEc--CCCeEEeCCCccc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      |.+++|++  ++|.|.|++||..
T Consensus        13 c~~~~C~Nt~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2          13 CQGGKCINTFGSFQCRCPTGYYL   35 (43)
T ss_dssp             GBTSEEEECSSCEEEECCTTCCB
T ss_pred             cCCCEEECCCCCeEeECCCCCeE
Confidence            55678987  8899999999963

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.0098  Score=24.07  Aligned_cols=19  Identities=21%  Similarity=0.975  Sum_probs=14.9

Q ss_pred             CCCCeEEc--CCCeEEeCCCcc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~   52 (60)
                      |.+ .|++  ++|.|.|++||.
T Consensus        10 C~~-~C~n~~Gsy~C~C~~Gy~   30 (41)
T d1i0ua2          10 CSQ-LCVNLEGGYKCQCEEGFQ   30 (41)
T ss_dssp             CSS-CEECSSSCCEECCCTTEE
T ss_pred             CCC-EeECCCCCEEeECCCCCe
Confidence            543 6776  789999999996

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.04  E-value=0.0071  Score=23.99  Aligned_cols=22  Identities=27%  Similarity=1.052  Sum_probs=18.6

Q ss_pred             CCCCCCCeEEc--CCCeEEeCCCcc
Q psy17083         30 YPGCKHGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        30 ~~~C~~g~C~~--~~~~C~C~~g~~   52 (60)
                      +| |.+|+|.+  +.+.|.|..||.
T Consensus         8 np-CGnGTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           8 NP-CGNGTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CS-SSSSCEEECSSSEEECCSSSSC
T ss_pred             Cc-cCCceeeecccceEEeecCCcC
Confidence            45 88999987  788999999984

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.021  Score=23.03  Aligned_cols=20  Identities=30%  Similarity=0.992  Sum_probs=15.8

Q ss_pred             CCCCeEEc--CCCeEEeCCCccc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWGG   53 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~G   53 (60)
                      |. ..|++  ++|+|.|++||..
T Consensus        11 C~-~~C~N~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3          11 CS-GVCHNLPGTFECICGPDSAL   32 (40)
T ss_dssp             CS-SEEEECSSSEEEEECSSSSC
T ss_pred             cc-CEeeCCCCCeEeECCCCCee
Confidence            54 36776  8899999999964

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.027  Score=23.80  Aligned_cols=17  Identities=18%  Similarity=0.759  Sum_probs=14.6

Q ss_pred             CeEEc--CCCeEEeCCCcc
Q psy17083         36 GYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        36 g~C~~--~~~~C~C~~g~~   52 (60)
                      ..|++  ++|.|.|++||.
T Consensus        24 ~~C~Nt~GsY~C~C~~Gy~   42 (53)
T d1apqa_          24 HLCHNYVGGYFCSCRPGYE   42 (53)
T ss_dssp             SEEEEETTEEEEECSTTCE
T ss_pred             CEeEcCCCCeEeECCCCCe
Confidence            36886  889999999996

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.62  E-value=0.027  Score=24.05  Aligned_cols=20  Identities=25%  Similarity=0.707  Sum_probs=16.2

Q ss_pred             CCee-EcCCCCcCCCCCCCCC
Q psy17083         10 RASV-QCRPGWRGEFCDQCKP   29 (60)
Q Consensus        10 ~~~C-~C~~g~~g~~C~~c~~   29 (60)
                      .+.| .|.++|+|.+|+.|+.
T Consensus        17 ~~vC~~C~~~~~G~~Ce~C~~   37 (55)
T d1kloa1          17 EVVCTHCPTGTAGKRCELCDD   37 (55)
T ss_dssp             CEEECSCCTTEESTTSCEECT
T ss_pred             CEEcCCCCCCCccCcccccCC
Confidence            3567 5999999999998764

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.44  E-value=0.032  Score=23.89  Aligned_cols=22  Identities=27%  Similarity=0.667  Sum_probs=17.3

Q ss_pred             cCCCeeE-cCCCCcCCCCCCCCC
Q psy17083          8 NIRASVQ-CRPGWRGEFCDQCKP   29 (60)
Q Consensus         8 ~~~~~C~-C~~g~~g~~C~~c~~   29 (60)
                      ..+++|. |.+...|.+|++|+.
T Consensus        17 ~~tG~C~~C~~nt~G~~Cd~C~~   39 (56)
T d1kloa2          17 RLTGECLKCIYNTAGFYCDRCKE   39 (56)
T ss_dssp             TTTCCBCCBCTTEETTTTCEECT
T ss_pred             CCCCCCCCCCCCCCCCCcCcccC
Confidence            3457894 999999999988654

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.34  E-value=0.037  Score=22.66  Aligned_cols=16  Identities=25%  Similarity=0.937  Sum_probs=13.8

Q ss_pred             eEEc--CCCeEEeCCCcc
Q psy17083         37 YCNG--SSWQCICDTNWG   52 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~   52 (60)
                      .|++  ++|.|.|++||.
T Consensus        17 ~C~Nt~gsy~C~C~~Gy~   34 (45)
T d1nt0a3          17 YCHNYLGGYYCSCRVGYI   34 (45)
T ss_dssp             EEEEETTEEEEECCTTEE
T ss_pred             EeecCCCCEEEeCCCCCE
Confidence            6876  789999999995

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.059  Score=21.99  Aligned_cols=17  Identities=18%  Similarity=0.684  Sum_probs=14.3

Q ss_pred             CeEEc--CCCeEEeCCCcc
Q psy17083         36 GYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        36 g~C~~--~~~~C~C~~g~~   52 (60)
                      ..|++  ++|.|.|++||.
T Consensus        16 ~~C~Nt~Gsy~C~C~~Gy~   34 (45)
T d1szba2          16 HHCHNHLGGFYCSCRAGYV   34 (45)
T ss_dssp             SEEEEETTEEEEECCTTEE
T ss_pred             CCCccCCCCeEEECCCCCe
Confidence            37876  889999999996

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.073  Score=21.49  Aligned_cols=19  Identities=32%  Similarity=1.071  Sum_probs=15.1

Q ss_pred             CCCCeEEc--CCCeEEeCCCcc
Q psy17083         33 CKHGYCNG--SSWQCICDTNWG   52 (60)
Q Consensus        33 C~~g~C~~--~~~~C~C~~g~~   52 (60)
                      |.+ .|++  +.|+|.|++||.
T Consensus        11 C~~-~C~n~~Gsy~C~C~~Gy~   31 (42)
T d1nzia2          11 CSH-FCNNFIGGYFCSCPPEYF   31 (42)
T ss_dssp             SSS-EEEEETTEEEEECCTTCE
T ss_pred             CCC-EeecCCCCEEEeCCCCCE
Confidence            543 6776  789999999995

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.02  E-value=0.15  Score=20.30  Aligned_cols=16  Identities=25%  Similarity=0.974  Sum_probs=13.0

Q ss_pred             eEEc--CCCeEEeCCCcc
Q psy17083         37 YCNG--SSWQCICDTNWG   52 (60)
Q Consensus        37 ~C~~--~~~~C~C~~g~~   52 (60)
                      .|++  +.+.|.|++||.
T Consensus        15 ~C~n~~g~~~C~C~~Gy~   32 (40)
T d3bpse1          15 VCNDLKIGYECLCPDGFQ   32 (40)
T ss_dssp             EEEECSSSEEEECCTTCC
T ss_pred             EEEcCCCCEEEECCCCCE
Confidence            5665  778999999995