Psyllid ID: psy17172

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80
Protein Sequence
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHHHccHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccEccHHHHHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHcccHHHHHcc
Coil and Loop (DISEMBL)
MEHFNLDVVRVWKLFSLIEegyhgtnpyhnsihaTDIKRHLTHLEIMASLLAAVAHdldhpgvnqpflIATSNHLAALYE
Flexible Loop (DISEMBL)
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Low Complexity Region (SEG)
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Disordered region (IsUnstruct)
***FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAA***
Disordered Region (DISOPRED)
*EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Disordered Region (DISEMBL)
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Disordered Region (DISPRO)
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	80	2.2.26 [Sep-21-2011]
Q9QXQ1	446	cAMP-specific 3',5'-cycli	yes	N/A	0.975	0.174	0.505	4e-19
Q9NP56	450	cAMP-specific 3',5'-cycli	yes	N/A	0.975	0.173	0.494	1e-18
P70453	456	High affinity cAMP-specif	no	N/A	1.0	0.175	0.451	6e-18
O08593	426	High affinity cAMP-specif	no	N/A	1.0	0.187	0.451	7e-18
Q13946	482	High affinity cAMP-specif	no	N/A	1.0	0.165	0.440	1e-17
O88502	823	High affinity cAMP-specif	no	N/A	0.862	0.083	0.428	3e-12
Q86H13	1039	cAMP-specific 3',5'-cAMP	yes	N/A	0.775	0.059	0.459	7e-12
O60658	829	High affinity cAMP-specif	no	N/A	0.937	0.090	0.377	2e-10
O95263	885	High affinity cAMP-specif	no	N/A	0.862	0.077	0.404	3e-10
Q08493	712	cAMP-specific 3',5'-cycli	no	N/A	0.787	0.088	0.407	5e-10

>sp|Q9QXQ1|PDE7B_MOUSE cAMP-specific 3',5'-cyclic phosphodiesterase 7B OS=Mus musculus GN=Pde7b PE=2 SV=1

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 13/91 (14%)

Query: 3   HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR-------------HLTHLEIMAS 49
           HF LD+V + +   +++E YHG NPYHN++HA D+ +              LT L+IM  
Sbjct: 147 HFKLDMVTLHRFLVMVQEDYHGHNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIMLG 206

Query: 50  LLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct: 207 LLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in the control of cAMP-mediated neural activity and cAMP metabolism in the brain.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 1EC: 7

>sp|Q9NP56|PDE7B_HUMAN cAMP-specific 3',5'-cyclic phosphodiesterase 7B OS=Homo sapiens GN=PDE7B PE=1 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 13/91 (14%)

Query: 3   HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR-------------HLTHLEIMAS 49
           HF LD+V + +   +++E YH  NPYHN++HA D+ +              LT L+IM  
Sbjct: 147 HFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIMLG 206

Query: 50  LLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct: 207 LLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in the control of cAMP-mediated neural activity and cAMP metabolism in the brain.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|P70453|PDE7A_MOUSE High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A OS=Mus musculus GN=Pde7a PE=2 SV=2

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
           +E+F+LD+V++ +   +I+E YH  NPYHN++HA D+ + +             T  +I+
Sbjct: 158 IEYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASSVTPWDIL 217

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
            SL+AA  HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 218 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 250

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May have a role in muscle signal transduction.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|O08593|PDE7A_RAT High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A (Fragment) OS=Rattus norvegicus GN=Pde7a PE=2 SV=1

 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
           +E+F+LD+V++ +   +I+E YH  NPYHN++HA D+ + +             T  +I+
Sbjct: 128 IEYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 187

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
            SL+AA  HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 188 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 220

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May have a role in muscle signal transduction.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|Q13946|PDE7A_HUMAN High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A OS=Homo sapiens GN=PDE7A PE=1 SV=2

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
           +E+F+LD++++ +   +I+E YH  NPYHN++HA D+ + +             T  +I+
Sbjct: 184 IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 243

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
            SL+AA  HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 244 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 276

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May have a role in muscle signal transduction.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|O88502|PDE8A_MOUSE High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A OS=Mus musculus GN=Pde8a PE=1 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 15/84 (17%)

Query: 9   VRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVA 55
           +R W  F +IE  YH +NPYHNS HA D             IK  L  ++ +A+L+AA  
Sbjct: 533 LRSW--FQMIESNYHSSNPYHNSTHAADVLHATAYFLSRDKIKETLDRIDEVAALIAATV 590

Query: 56  HDLDHPGVNQPFLIATSNHLAALY 79
           HD+DHPG    FL    N LA LY
Sbjct: 591 HDVDHPGRTNSFLCNAGNQLAVLY 614

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in maintaining basal levels of the cyclic nucleotide and/or in the cAMP regulation of germ cell development.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|Q86H13|PDE4_DICDI cAMP-specific 3',5'-cAMP phosphodiesterase 4 OS=Dictyostelium discoideum GN=Pde4 PE=1 SV=2

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 12/74 (16%)

Query: 18  IEEGYHGTNPYHNSIHATDI------------KRHLTHLEIMASLLAAVAHDLDHPGVNQ 65
           IE GY  TNPYHNSIHATD+             + LT +E+ + +LAA+ HD  HPGVN 
Sbjct: 598 IESGYDSTNPYHNSIHATDVLHNLNYFIEKSFGKFLTDIELFSMILAAIIHDFKHPGVNN 657

Query: 66  PFLIATSNHLAALY 79
            F I + + LA  Y
Sbjct: 658 HFQINSKSRLALKY 671

Phosphodiesterase specific for extracellular cAMP. Involved in the degradation of extracellular cAMP specifically during multicellular development.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 5

EC: 3

>sp|O60658|PDE8A_HUMAN High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A OS=Homo sapiens GN=PDE8A PE=1 SV=2

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 15/90 (16%)

Query: 3   HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMAS 49
           H +   +R W    +IE  YH +NPYHNS H+ D             IK  L  ++ +A+
Sbjct: 532 HCSESTLRSW--LQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAA 589

Query: 50  LLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           L+AA  HD+DHPG    FL    + LA LY
Sbjct: 590 LIAATIHDVDHPGRTNSFLCNAGSELAILY 619

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in maintaining basal levels of the cyclic nucleotide and/or in the cAMP regulation of germ cell development.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|O95263|PDE8B_HUMAN High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B OS=Homo sapiens GN=PDE8B PE=1 SV=2

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 15/84 (17%)

Query: 9   VRVWKLFSLIEEGYHGTNPYHNSIHATDI-------------KRHLTHLEIMASLLAAVA 55
           +R W  F +IE  YH +N YHNS HA D+             K  L  L+ +A+L+AA  
Sbjct: 597 LRAW--FQVIEANYHSSNAYHNSTHAADVLHATAFFLGKERVKGSLDQLDEVAALIAATV 654

Query: 56  HDLDHPGVNQPFLIATSNHLAALY 79
           HD+DHPG    FL    + LA LY
Sbjct: 655 HDVDHPGRTNSFLCNAGSELAVLY 678

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in specific signaling in the thyroid gland.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

>sp|Q08493|PDE4C_HUMAN cAMP-specific 3',5'-cyclic phosphodiesterase 4C OS=Homo sapiens GN=PDE4C PE=1 SV=2

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 13/76 (17%)

Query: 17  LIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGV 63
           ++E  YH    YHNS+HA D+ +               T LEI+A+L A+  HD+DHPGV
Sbjct: 376 MLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGV 435

Query: 64  NQPFLIATSNHLAALY 79
           +  FLI T++ LA +Y
Sbjct: 436 SNQFLINTNSELALMY 451

Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
345491937	1063	PREDICTED: hypothetical protein LOC10011	1.0	0.075	0.752	2e-34
340715379	1182	PREDICTED: hypothetical protein LOC10064	1.0	0.067	0.720	3e-33
307208668	1095	High affinity cAMP-specific 3',5'-cyclic	1.0	0.073	0.731	3e-33
350400022	1182	PREDICTED: hypothetical protein LOC10074	1.0	0.067	0.720	4e-33
328783208	1209	PREDICTED: hypothetical protein LOC41402	1.0	0.066	0.709	6e-33
380013365	1212	PREDICTED: uncharacterized protein LOC10	1.0	0.066	0.709	7e-33
328699519	901	PREDICTED: hypothetical protein LOC10016	1.0	0.088	0.763	8e-33
328699515	856	PREDICTED: hypothetical protein LOC10016	1.0	0.093	0.763	1e-32
383863568	1087	PREDICTED: uncharacterized protein LOC10	1.0	0.073	0.698	1e-32
312381624	1243	hypothetical protein AND_06013 [Anophele	1.0	0.064	0.731	1e-32

>gi|345491937|ref|XP_001599769.2| PREDICTED: hypothetical protein LOC100114896 [Nasonia vitripennis]

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/93 (75%), Positives = 77/93 (82%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +EHFNLDVVRVWKLF+LIEEGYH TNPYHNSIHA D             I+RHL++LEIM
Sbjct: 300 LEHFNLDVVRVWKLFTLIEEGYHSTNPYHNSIHAADVTQAMHCFLQEEQIRRHLSYLEIM 359

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALYE
Sbjct: 360 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYE 392

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715379|ref|XP_003396192.1| PREDICTED: hypothetical protein LOC100648320 [Bombus terrestris]

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/93 (72%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +E+FNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             I+ HLT+LEIM
Sbjct: 181 LEYFNLDVVTVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRAHLTNLEIM 240

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 241 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 273

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208668|gb|EFN85958.1| High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A [Harpegnathos saltator]

 Score =  145 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/93 (73%), Positives = 73/93 (78%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           + HFNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             IK HLT LEIM
Sbjct: 69  LRHFNLDVVTVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEKKIKTHLTSLEIM 128

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 129 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 161

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400022|ref|XP_003485709.1| PREDICTED: hypothetical protein LOC100748680 [Bombus impatiens]

 Score =  145 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 67/93 (72%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +E+FNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             I+ HLT+LEIM
Sbjct: 181 LEYFNLDVVTVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRAHLTNLEIM 240

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 241 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 273

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783208|ref|XP_397457.4| PREDICTED: hypothetical protein LOC414021 [Apis mellifera]

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/93 (70%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++FNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             I+ HLT+LEIM
Sbjct: 199 LQYFNLDVVTVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRTHLTNLEIM 258

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 259 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 291

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013365|ref|XP_003690732.1| PREDICTED: uncharacterized protein LOC100869255 [Apis florea]

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/93 (70%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++FNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             I+ HLT+LEIM
Sbjct: 201 LQYFNLDVVTVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRTHLTNLEIM 260

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 261 ASLIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 293

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699519|ref|XP_001952800.2| PREDICTED: hypothetical protein LOC100160807 isoform 1 [Acyrthosiphon pisum]

 Score =  144 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 71/93 (76%), Positives = 74/93 (79%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           MEHF LDVV+VWKLFSLIEEGYH TNPYHN+IHATD             IK  LT LEIM
Sbjct: 178 MEHFKLDVVQVWKLFSLIEEGYHSTNPYHNAIHATDVTQAMHCFLQEDKIKNFLTPLEIM 237

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAVAHDLDHPGVNQPFLIATSNHLA LYE
Sbjct: 238 ASLIAAVAHDLDHPGVNQPFLIATSNHLATLYE 270

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328699515|ref|XP_003240958.1| PREDICTED: hypothetical protein LOC100160807 isoform 2 [Acyrthosiphon pisum]

 Score =  144 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 71/93 (76%), Positives = 74/93 (79%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           MEHF LDVV+VWKLFSLIEEGYH TNPYHN+IHATD             IK  LT LEIM
Sbjct: 178 MEHFKLDVVQVWKLFSLIEEGYHSTNPYHNAIHATDVTQAMHCFLQEDKIKNFLTPLEIM 237

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+AAVAHDLDHPGVNQPFLIATSNHLA LYE
Sbjct: 238 ASLIAAVAHDLDHPGVNQPFLIATSNHLATLYE 270

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863568|ref|XP_003707252.1| PREDICTED: uncharacterized protein LOC100877791 [Megachile rotundata]

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/93 (69%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++FNLDVV VWKLF+ IEEGYH TNPYHNSIHATD             I+ HLT+LEIM
Sbjct: 72  LQYFNLDVVSVWKLFAFIEEGYHSTNPYHNSIHATDVTQAMHCFLQEEKIRTHLTNLEIM 131

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           A+L+AAV HDLDHPGVNQPFL+ATSNHLAALY+
Sbjct: 132 AALIAAVTHDLDHPGVNQPFLVATSNHLAALYQ 164

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312381624|gb|EFR27332.1| hypothetical protein AND_06013 [Anopheles darlingi]

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 68/93 (73%), Positives = 75/93 (80%), Gaps = 13/93 (13%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR-------------HLTHLEIM 47
           ++HF+LDVVRVWKLFSLIEEGYH TNPYHNSIHATD+ +             HL+ LEIM
Sbjct: 252 LDHFHLDVVRVWKLFSLIEEGYHSTNPYHNSIHATDVTQAMHCFLQERRILEHLSPLEIM 311

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
           ASL+ AV HDLDHPGVNQPFLIATSNHLAALYE
Sbjct: 312 ASLIGAVTHDLDHPGVNQPFLIATSNHLAALYE 344

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
UNIPROTKB|F1LN39	395	Pde7b "Protein Pde7b" [Rattus	1.0	0.202	0.505	1.2e-19
UNIPROTKB|F1LSY3	399	Pde7b "Protein Pde7b" [Rattus	1.0	0.200	0.505	1.3e-19
UNIPROTKB|H0Y689	200	PDE7B "cAMP-specific 3',5'-cyc	1.0	0.4	0.494	1.9e-19
MGI|MGI:1352752	446	Pde7b "phosphodiesterase 7B" [	1.0	0.179	0.505	2.1e-19
RGD|621016	446	Pde7b "phosphodiesterase 7B" [	1.0	0.179	0.505	2.1e-19
UNIPROTKB|F1S3R8	398	PDE7B "Uncharacterized protein	1.0	0.201	0.494	4.8e-19
UNIPROTKB|A6QP37	438	PDE7B "Uncharacterized protein	1.0	0.182	0.494	7.1e-19
UNIPROTKB|Q9NP56	450	PDE7B "cAMP-specific 3',5'-cyc	1.0	0.177	0.494	7.8e-19
UNIPROTKB|F1PA18	453	PDE7B "Uncharacterized protein	1.0	0.176	0.494	7.9e-19
UNIPROTKB|F1NVY7	424	PDE7B "Uncharacterized protein	1.0	0.188	0.483	1.7e-18

UNIPROTKB|F1LN39 Pde7b "Protein Pde7b" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 47/93 (50%), Positives = 63/93 (67%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YHG NPYHN++HA D+ +  H           LT L+IM
Sbjct:    94 IHHFKLDMVTLHRFLVMVQEDYHGHNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 153

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   154 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 186

GO:0004114 "3',5'-cyclic-nucleotide phosphodiesterase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1LSY3 Pde7b "Protein Pde7b" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 47/93 (50%), Positives = 63/93 (67%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YHG NPYHN++HA D+ +  H           LT L+IM
Sbjct:    98 IHHFKLDMVTLHRFLVMVQEDYHGHNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 157

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   158 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 190

GO:0004114 "3',5'-cyclic-nucleotide phosphodiesterase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|H0Y689 PDE7B "cAMP-specific 3',5'-cyclic phosphodiesterase 7B" [Homo sapiens (taxid:9606)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT L+IM
Sbjct:    40 IHHFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 99

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   100 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 132

GO:0004114 "3',5'-cyclic-nucleotide phosphodiesterase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:1352752 Pde7b "phosphodiesterase 7B" [Mus musculus (taxid:10090)]

 Score = 237 (88.5 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 47/93 (50%), Positives = 63/93 (67%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YHG NPYHN++HA D+ +  H           LT L+IM
Sbjct:   145 IHHFKLDMVTLHRFLVMVQEDYHGHNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 204

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   205 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

GO:0003824 "catalytic activity" evidence=IEA

GO:0004114 "3',5'-cyclic-nucleotide phosphodiesterase activity" evidence=IEA

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=ISO;IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0008081 "phosphoric diester hydrolase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IDA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|621016 Pde7b "phosphodiesterase 7B" [Rattus norvegicus (taxid:10116)]

 Score = 237 (88.5 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 47/93 (50%), Positives = 63/93 (67%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YHG NPYHN++HA D+ +  H           LT L+IM
Sbjct:   145 IHHFKLDMVTLHRFLVMVQEDYHGHNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 204

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   205 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=ISO

GO:0019933 "cAMP-mediated signaling" evidence=TAS

UNIPROTKB|F1S3R8 PDE7B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 4.8e-19, P = 4.8e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT L+IM
Sbjct:    90 IHHFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 149

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   150 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 182

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|A6QP37 PDE7B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 232 (86.7 bits), Expect = 7.1e-19, P = 7.1e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT L+IM
Sbjct:   197 IHHFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 256

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   257 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 289

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|Q9NP56 PDE7B "cAMP-specific 3',5'-cyclic phosphodiesterase 7B" [Homo sapiens (taxid:9606)]

 Score = 232 (86.7 bits), Expect = 7.8e-19, P = 7.8e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT L+IM
Sbjct:   145 IHHFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLASFLTPLDIM 204

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   205 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

GO:0007165 "signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=IEA

GO:0006198 "cAMP catabolic process" evidence=IEA

GO:0007268 "synaptic transmission" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

UNIPROTKB|F1PA18 PDE7B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 232 (86.7 bits), Expect = 7.9e-19, P = 7.9e-19
 Identities = 46/93 (49%), Positives = 62/93 (66%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT L+IM
Sbjct:   145 IHHFKLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAIHCYLKEPKLASFLTPLDIM 204

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T++HLA LY+
Sbjct:   205 LGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQ 237

GO:0046872 "metal ion binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0004114 "3',5'-cyclic-nucleotide phosphodiesterase activity" evidence=IEA

UNIPROTKB|F1NVY7 PDE7B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 228 (85.3 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 45/93 (48%), Positives = 61/93 (65%)

Query:     1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR--H-----------LTHLEIM 47
             + HF LD+V + +   +++E YH  NPYHN++HA D+ +  H           LT  +IM
Sbjct:   122 IHHFQLDMVTLHRFLVMVQEDYHSQNPYHNAVHAADVTQAMHCYLREPKLANFLTPSDIM 181

Query:    48 ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
               LLAA AHD+DHPGVNQPFLI T +HLA+LY+
Sbjct:   182 LGLLAAAAHDVDHPGVNQPFLIKTKHHLASLYQ 214

GO:0007165 "signal transduction" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QXQ1	PDE7B_MOUSE	3, ., 1, ., 4, ., 1, 7	0.5054	0.975	0.1748	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	80
pfam00233	237	pfam00233, PDEase_I, 3'5'-cyclic nucleotide phosph	2e-11

>gnl|CDD|109297 pfam00233, PDEase_I, 3'5'-cyclic nucleotide phosphodiesterase

 Score = 56.7 bits (137), Expect = 2e-11
 Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 13/65 (20%)

Query: 28 YHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNH 74
          YHN  HA D             ++R+LT LEI+A L AA  HD+DH G N  F I + + 
Sbjct: 1  YHNWRHAADVTQTTHLLLLTLALERYLTDLEILALLFAAAIHDVDHRGTNNSFQINSKSE 60

Query: 75 LAALY 79
          LA LY
Sbjct: 61 LAILY 65

Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	80
KOG3689|consensus	707		99.97
PF00233	237	PDEase_I: 3'5'-cyclic nucleotide phosphodiesterase	99.9
KOG3688|consensus	554		99.89
KOG1229|consensus	775		99.82
cd00077	145	HDc Metal dependent phosphohydrolases with conserv	97.14
smart00471	124	HDc Metal dependent phosphohydrolases with conserv	96.68
PRK10119	231	putative hydrolase; Provisional	94.78
PF01966	122	HD: HD domain; InterPro: IPR006674 This domain is	94.52
COG1078	421	HD superfamily phosphohydrolases [General function	93.93
TIGR01353	381	dGTP_triPase deoxyguanosinetriphosphate triphospho	93.31
TIGR03401	228	cyanamide_fam HD domain protein, cyanamide hydrata	91.93
KOG2681|consensus	498		91.29
PRK01286	336	deoxyguanosinetriphosphate triphosphohydrolase-lik	89.49
PF07514	327	TraI_2: Putative helicase; InterPro: IPR011119 The	89.03
COG0232	412	Dgt dGTP triphosphohydrolase [Nucleotide transport	88.53
PRK01096	440	deoxyguanosinetriphosphate triphosphohydrolase-lik	88.04
PRK04926	503	dgt deoxyguanosinetriphosphate triphosphohydrolase	86.5
TIGR03276	179	Phn-HD phosphonate degradation operons associated	86.48
TIGR03760	218	ICE_TraI_Pfluor integrating conjugative element re	85.41
TIGR00277	80	HDIG uncharacterized domain HDIG. This domain is f	85.25
PRK05318	432	deoxyguanosinetriphosphate triphosphohydrolase-lik	84.86
COG2206	344	c-di-GMP phosphodiesterase class II (HD-GYP domain	84.04
PRK03007	428	deoxyguanosinetriphosphate triphosphohydrolase-lik	83.69
PRK10885	409	cca multifunctional tRNA nucleotidyl transferase/2	82.93
TIGR00295	164	conserved hypothetical protein TIGR00295. This set	81.18

>KOG3689|consensus

Probab=99.97  E-value=1.4e-32  Score=215.82  Aligned_cols=80  Identities=41%  Similarity=0.737  Sum_probs=77.5

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+++||||||.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus       403 v~~f~I~~~tL~r~lltV~k~Yr~~v~YHNw~HAf~VaQ~m~~lL~t~~L~~~fTdlEiLalliAalcHDlDHrGtNN~f  482 (707)
T KOG3689|consen  403 VKKFKIDVETLCRFLLTVEKNYRSNVPYHNWRHAFDVAQAMFALLKTPKLQNKFTDLEILALLIAALCHDLDHRGTNNSY  482 (707)
T ss_pred             ceeeccCHHHHHHHHhhhhhccccCCcchhHHHHHHHHHHHHHHHhchhHHhhcChHHHHHHHHHHHHccCCCCCCCcHH
Confidence            46899999999999999999999899999999999998             58899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||.+|+
T Consensus       483 ~iks~s~LA~lY~  495 (707)
T KOG3689|consen  483 LIKSNSPLAQLYN  495 (707)
T ss_pred             HHhcCCHHHHHhC
Confidence            9999999999997

>PF00233 PDEase_I: 3'5'-cyclic nucleotide phosphodiesterase; InterPro: IPR002073 The cyclic nucleotide phosphodiesterases (PDE) comprise a group of enzymes that degrade the phosphodiester bond in the second messenger molecules cAMP and cGMP

Probab=99.90  E-value=2.5e-24  Score=151.34  Aligned_cols=53  Identities=55%  Similarity=0.867  Sum_probs=49.5

Q ss_pred             CCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHHHhhcChhHHhcC
Q psy17172         28 YHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE   80 (80)
Q Consensus        28 yHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~~t~~~LA~lYn   80 (80)
                      |||+.||+||+             ..|+++|++|+++||+|||+||||+||.|++++++|||++||
T Consensus         1 yHN~~Ha~dV~q~~~~ll~~~~~~~~l~~~e~~alliAal~HDv~HpG~~N~flv~~~~~LA~~Y~   66 (237)
T PF00233_consen    1 YHNFRHAADVLQFVYYLLSNGGLREYLSPLEIFALLIAALCHDVDHPGVNNAFLVKTNSPLAILYN   66 (237)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHGGGGTTS-HHHHHHHHHHHHHTTTT-SSSCHHHHHHTTSHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHccCccccCCHHHHHHHHHHHHHhcCCCCccccchhhccccchhhhcC
Confidence            89999999999             578999999999999999999999999999999999999997

They are divided into 11 families. They regulate the localisation, duration and amplitude of cyclic nucleotide signalling within subcellular domains. PDEs are therefore important for signal transduction. PDE enzymes are often targets for pharmacological inhibition due to their unique tissue distribution, structural properties, and functional properties. Inhibitors include: Roflumilast for chronic obstructive pulmonary disease and asthma [], Sildenafil for erectile dysfunction [] and Cilostazol for peripheral arterial occlusive disease [], amongst others. Retinal 3',5'-cGMP phosphodiesterase is located in photoreceptor outer segments: it is light activated, playing a pivotal role in signal transduction. In rod cells, PDE is oligomeric, comprising an alpha-, a beta- and 2 gamma-subunits, while in cones, PDE is a homodimer of alpha chains, which are associated with several smaller subunits. Both rod and cone PDEs catalyse the hydrolysis of cAMP or cGMP to the corresponding nucleoside 5' monophosphates, both enzymes also binding cGMP with high affinity. The cGMP-binding sites are located in the N-terminal half of the protein sequence, while the catalytic core resides in the C-terminal portion. This entry represents the catalytic domain of PDE which is multihelical and can be divided into three subdomains.; GO: 0004114 3',5'-cyclic-nucleotide phosphodiesterase activity, 0007165 signal transduction; PDB: 3I8V_A 3TVX_A 2QYK_A 1ZKL_A 3G3N_A 4DFF_B 2OUS_B 3SNL_A 2OUY_A 2OUP_B ....

>KOG3688|consensus

Probab=99.89  E-value=3.4e-24  Score=162.21  Aligned_cols=80  Identities=39%  Similarity=0.610  Sum_probs=76.9

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCC-CCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQP   66 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~-~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~   66 (80)
                      |.+|+||..-+..|+..++.+|.+ .|||||..||+||+             ..|+.+|++|+++||++||++|||+||+
T Consensus       190 I~rfkip~~~l~~f~~ale~gy~k~knPyhn~~haadVtqt~H~~l~~Tgim~~Lt~LEllA~~faAaiHDYeHtGtTNn  269 (554)
T KOG3688|consen  190 IHRFKIPHGCLELFAHALEVGYSKYKNPYHNLIHAADVTQTVHYHLLHTGIMNWLTELELLALLFAAAIHDYEHTGTTNN  269 (554)
T ss_pred             hhhhcccHHHHHHHHHHHHhcccCCCCCccchhhhhhcccCchHHhhhhhHHHHHHHHHHHHHHHHHHHhcccCCCcccc
Confidence            468999999999999999999976 89999999999998             6899999999999999999999999999


Q ss_pred             HHHhhcChhHHhcC
Q psy17172         67 FLIATSNHLAALYE   80 (80)
Q Consensus        67 fl~~t~~~LA~lYn   80 (80)
                      |+|+++|.-|++||
T Consensus       270 FhiQt~s~~AiLYN  283 (554)
T KOG3688|consen  270 FHIQTRSDKAILYN  283 (554)
T ss_pred             eEEEecCceeEEec
Confidence            99999999999998

>KOG1229|consensus

Probab=99.82  E-value=4.9e-21  Score=146.47  Aligned_cols=79  Identities=41%  Similarity=0.659  Sum_probs=74.7

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      +.++++.+.|.+|+..||..|+..|.|||.+||+||+             -.++.++..|.++||.+||++|||++|+|+
T Consensus       477 dfL~CSd~~L~aWf~~IEA~YHa~NaYHNaTHAADVLhATaFFL~kerV~g~ldeld~VAALiAAaVHDlDHPGR~NafL  556 (775)
T KOG1229|consen  477 DFLGCSDDLLHAWFLSIEAHYHAGNAYHNATHAADVLHATAFFLDKERVAGHLDELDAVAALIAAAVHDLDHPGRGNAFL  556 (775)
T ss_pred             ccccCcHHHHHHHHHHHhhhhcccccccccchHHHHHHHHHHhcCCchhhcccchHHHHHHHHHHHHhccCCCCCCceeE
Confidence            4578999999999999999999999999999999998             367888999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++.++||++||
T Consensus       557 cNagqeLAiLYN  568 (775)
T KOG1229|consen  557 CNAGQELAILYN  568 (775)
T ss_pred             ecCCcceeEEec
Confidence            999999999998

>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif

Probab=97.14  E-value=0.00055  Score=41.23  Aligned_cols=39  Identities=28%  Similarity=0.417  Sum_probs=29.7

Q ss_pred             CCChhhhhhhhh-------hc--hHHHHHHHHHHHHHhcCCCCCCchH
Q psy17172         28 YHNSIHATDIKR-------HL--THLEIMASLLAAVAHDLDHPGVNQP   66 (80)
Q Consensus        28 yHN~~Ha~dv~~-------~l--~~~~~~a~l~aal~HDv~HpG~~N~   66 (80)
                      ++++.|+..|+.       .+  ++.+...+.+||++||+|+++..+.
T Consensus         1 ~~~~~Hs~~v~~~~~~~~~~~~~~~~~~~~l~~aaLlHDig~~~~~~~   48 (145)
T cd00077           1 EHRFEHSLRVAQLARRLAEELGLSEEDIELLRLAALLHDIGKPGTPDA   48 (145)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhcCCccCccc
Confidence            367888888872       11  2566778999999999999987664

>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif

Probab=96.68  E-value=0.0029  Score=37.44  Aligned_cols=41  Identities=37%  Similarity=0.560  Sum_probs=30.4

Q ss_pred             CCCChhhhhhhhhh-------chHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172         27 PYHNSIHATDIKRH-------LTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        27 pyHN~~Ha~dv~~~-------l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++.+.|+..|+..       +...+...+.+||++||+|.+......
T Consensus         2 ~~~~~~H~~~v~~~~~~l~~~~~~~~~~~~~~a~LlHDig~~~~~~~~   49 (124)
T smart00471        2 DYHVFEHSLRVAQLAAALAEELGLLDIELLLLAALLHDIGKPGTPDSF   49 (124)
T ss_pred             CchHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHcccCccCCHHH
Confidence            56788899988822       222245578999999999999887655

Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit).

>PRK10119 putative hydrolase; Provisional

Probab=94.78  E-value=0.051  Score=38.66  Aligned_cols=46  Identities=15%  Similarity=0.247  Sum_probs=32.8

Q ss_pred             HHHHHhhCCCCCCCCChhhhhhhh---hhc---hHHHHHHHHHHHHHhcCCC
Q psy17172         15 FSLIEEGYHGTNPYHNSIHATDIK---RHL---THLEIMASLLAAVAHDLDH   60 (80)
Q Consensus        15 l~~i~~~Y~~~~pyHN~~Ha~dv~---~~l---~~~~~~a~l~aal~HDv~H   60 (80)
                      -.-+++.+.++-|+|++.|..-|.   ..+   ...+...+.+||+.||++.
T Consensus        11 ~~~v~~~l~~~~~~HD~~Hi~RV~~lA~~Ia~~e~~D~~vv~lAAlLHDv~d   62 (231)
T PRK10119         11 ENWLKNHHQHQDAAHDICHFRRVWATAQKLAADDDVDMLVVLTACYFHDIVS   62 (231)
T ss_pred             HHHHHHHhhcCCCccChHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcch
Confidence            334445555468999999999987   222   1236678889999999965

>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity []

Probab=94.52  E-value=0.051  Score=32.45  Aligned_cols=35  Identities=17%  Similarity=0.140  Sum_probs=25.5

Q ss_pred             hhhhhhhh-------hhch-HHHHHHHHHHHHHhcCCCCCCch
Q psy17172         31 SIHATDIK-------RHLT-HLEIMASLLAAVAHDLDHPGVNQ   65 (80)
Q Consensus        31 ~~Ha~dv~-------~~l~-~~~~~a~l~aal~HDv~HpG~~N   65 (80)
                      +.|...|+       ..+. +.+...+.+||++||+|......
T Consensus         2 ~~Hs~~V~~~a~~l~~~~~~~~~~~~l~~aaLlHDiGk~~~~~   44 (122)
T PF01966_consen    2 FEHSLRVAELAERLADRLGLEEDRELLRIAALLHDIGKIPTPD   44 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTHHSTHH
T ss_pred             hhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhcCCCCCch
Confidence            35666666       1122 56778999999999999887664

These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria, archaea and eukaryotes. The fact that all the highly conserved residues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins [].; GO: 0008081 phosphoric diester hydrolase activity, 0046872 metal ion binding; PDB: 2CQZ_A 2Q14_C 3CCG_A 2PAU_A 2PAQ_B 2PAR_B 3BG2_A 3NQW_A 2QGS_B 2DQB_D ....

>COG1078 HD superfamily phosphohydrolases [General function prediction only]

Probab=93.93  E-value=0.067  Score=41.01  Aligned_cols=28  Identities=29%  Similarity=0.344  Sum_probs=22.4

Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy17172         42 THLEIMASLLAAVAHDLDHPGVNQPFLI   69 (80)
Q Consensus        42 ~~~~~~a~l~aal~HDv~HpG~~N~fl~   69 (80)
                      ++.+...+.+|||.||+||+=.|=.|..
T Consensus        79 ~~~~~~~~~~AALLHDIGHgPFSH~fE~  106 (421)
T COG1078          79 DEEERLLVRLAALLHDIGHGPFSHTFEY  106 (421)
T ss_pred             chHHHHHHHHHHHHHccCCCccccchHH
Confidence            4455568999999999999988777654

>TIGR01353 dGTP_triPase deoxyguanosinetriphosphate triphosphohydrolase, putative

Probab=93.31  E-value=0.07  Score=40.34  Aligned_cols=37  Identities=16%  Similarity=0.217  Sum_probs=24.3

Q ss_pred             CCCh-hhhhhhhh-------hch----------HHHHHHHHHHHHHhcCCCCCCc
Q psy17172         28 YHNS-IHATDIKR-------HLT----------HLEIMASLLAAVAHDLDHPGVN   64 (80)
Q Consensus        28 yHN~-~Ha~dv~~-------~l~----------~~~~~a~l~aal~HDv~HpG~~   64 (80)
                      +||. +|+..|++       .+.          ..+.-.+-.|||+||+|||=..
T Consensus        36 ~~tRltHslev~~i~r~~~~~l~~~~~~~~~~~~~~~~l~~~a~L~HDiGhpPfg   90 (381)
T TIGR01353        36 VRTRLTHSLEVAQVGRSIANLIGLRYDLELEELGPFERLAETACLAHDIGNPPFG   90 (381)
T ss_pred             CcCHhHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhcCCCCCCc
Confidence            5664 79988881       111          1133467789999999999443

dGTP triphosphohydrolase (dgt) releases inorganic triphosphate, an unusual activity reaction product, from GTP. Its activity has been called limited to the Enterobacteriaceae, although homologous sequences are detected elsewhere. This finding casts doubt on whether the activity is shared in other species. In several of these other species, the homologous gene is found in an apparent operon with dnaG, the DNA primase gene. The enzyme from E. coli was shown to bind coopertatively to single stranded DNA. The biological role of dgt is unknown.

>TIGR03401 cyanamide_fam HD domain protein, cyanamide hydratase family

Probab=91.93  E-value=0.34  Score=34.24  Aligned_cols=56  Identities=16%  Similarity=0.132  Sum_probs=40.4

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh---hhch-------HHHHHHHHHHHHHhcCCC
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK---RHLT-------HLEIMASLLAAVAHDLDH   60 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~---~~l~-------~~~~~a~l~aal~HDv~H   60 (80)
                      ..+.||...+.+-.....+...   |=|.+.|..-|.   ..+.       ..+...+++||+.||+|=
T Consensus        31 ~~~~iPdt~l~~~a~~~~~~~l---~~~~~~Hs~RV~~~a~~ia~~e~~~~~~D~evl~lAALLHDIG~   96 (228)
T TIGR03401        31 EDTPLPDTPLVKFAQEYAKARL---PPETYNHSLRVYYYGLAIARDQFPEWDLSDETWFLTCLLHDIGT   96 (228)
T ss_pred             CCCCCCChHHHHHHHHHHHhhC---CHhhhHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHhhcc
Confidence            3468899999887777776664   238999998887   1111       234456889999999974

Members of this protein family are known, so far, in the Ascomycota, a branch of the Fungi, and contain an HD domain (pfam01966), found typically in various metal-dependent phosphohydrolases. The only characterized member of this family, from the soil fungus Myrothecium verrucaria, is cyanamide hydratase (EC 4.2.1.69), a zinc-containing homohexamer that adds water to the fertilizer cyanamide (NCNH2), a nitrile compound, to produce urea (NH2-CO-NH2). Homologs are likely to be nitrile hydratases.

>KOG2681|consensus

Probab=91.29  E-value=0.19  Score=39.26  Aligned_cols=29  Identities=28%  Similarity=0.440  Sum_probs=25.4

Q ss_pred             hchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172         40 HLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        40 ~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      .+++.+..|.=+|||+||+||--.+-.|.
T Consensus       101 ~It~~d~~~vqvA~LLHDIGHGPfSHmFe  129 (498)
T KOG2681|consen  101 CITEVDLQAVQVAALLHDIGHGPFSHLFE  129 (498)
T ss_pred             CCCHHHHHHHHHHHHHhhcCCCchhhhhh
Confidence            67899999999999999999987766664

>PRK01286 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional

Probab=89.49  E-value=0.19  Score=37.60  Aligned_cols=36  Identities=22%  Similarity=0.229  Sum_probs=21.4

Q ss_pred             hhhhhhhhh-------hchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172         31 SIHATDIKR-------HLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        31 ~~Ha~dv~~-------~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      .+|+..|++       .+...+ -.+-.|||+||+|||=++=.+
T Consensus        64 ~~Hsl~V~~iar~~~~~l~~~~-~l~~aaaL~HDiGh~PfgH~g  106 (336)
T PRK01286         64 LTHTLEVAQIARTIARALRLNE-DLTEAIALGHDLGHTPFGHAG  106 (336)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHhcCCCCCCcchH
Confidence            367887771       121111 123458999999999554433

>PF07514 TraI_2: Putative helicase; InterPro: IPR011119 The members of this family are restricted to the proteobacteria

Probab=89.03  E-value=0.4  Score=35.56  Aligned_cols=22  Identities=32%  Similarity=0.306  Sum_probs=18.2

Q ss_pred             hchHHHHHHHHHHHHHhcCCCC
Q psy17172         40 HLTHLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus        40 ~l~~~~~~a~l~aal~HDv~Hp   61 (80)
                      ..++....++++||||||+|-|
T Consensus        98 ~q~~~W~~avf~AALlhdlgk~  119 (327)
T PF07514_consen   98 AQEPAWRYAVFYAALLHDLGKP  119 (327)
T ss_pred             HHHhhhHHHHHHHHHHhccCcc
Confidence            4456667899999999999975

Some members have been annotated as helicase, conjugative relaxase or nickase. The majority contain an HD domain, which is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity. These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria.

>COG0232 Dgt dGTP triphosphohydrolase [Nucleotide transport and metabolism]

Probab=88.53  E-value=0.24  Score=38.18  Aligned_cols=13  Identities=46%  Similarity=0.749  Sum_probs=11.0

Q ss_pred             HHHHHHHhcCCCC
Q psy17172         49 SLLAAVAHDLDHP   61 (80)
Q Consensus        49 ~l~aal~HDv~Hp   61 (80)
                      +=.|||+||+|||
T Consensus        99 ~E~a~LaHDiGhP  111 (412)
T COG0232          99 VETACLAHDIGHP  111 (412)
T ss_pred             HHHHHHHhcCCCC
Confidence            4468999999999

>PRK01096 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional

Probab=88.04  E-value=0.34  Score=37.42  Aligned_cols=15  Identities=33%  Similarity=0.499  Sum_probs=12.9

Q ss_pred             HHHHHHHHhcCCCCC
Q psy17172         48 ASLLAAVAHDLDHPG   62 (80)
Q Consensus        48 a~l~aal~HDv~HpG   62 (80)
                      .+-.|||+||+|||=
T Consensus       101 lv~aa~L~HDiGhpP  115 (440)
T PRK01096        101 IVQSACLAHDIGNPP  115 (440)
T ss_pred             HHHHHHHHhcCCCCC
Confidence            567899999999993

>PRK04926 dgt deoxyguanosinetriphosphate triphosphohydrolase; Provisional

Probab=86.50  E-value=0.46  Score=37.40  Aligned_cols=14  Identities=29%  Similarity=0.586  Sum_probs=11.9

Q ss_pred             HHHHHHHHhcCCCC
Q psy17172         48 ASLLAAVAHDLDHP   61 (80)
Q Consensus        48 a~l~aal~HDv~Hp   61 (80)
                      .+-.|||+||+|||
T Consensus       109 lveaa~L~HDiGhp  122 (503)
T PRK04926        109 IVEMACLMHDIGNP  122 (503)
T ss_pred             HHHHHHHHhcCCCC
Confidence            34589999999999

>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein

Probab=86.48  E-value=0.41  Score=33.00  Aligned_cols=35  Identities=20%  Similarity=0.137  Sum_probs=22.5

Q ss_pred             CCCCCChhhhhhhhhh---chHHHHHHHHHHHHHhcCCCC
Q psy17172         25 TNPYHNSIHATDIKRH---LTHLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus        25 ~~pyHN~~Ha~dv~~~---l~~~~~~a~l~aal~HDv~Hp   61 (80)
                      .-|-=-..|+..++..   -...  -.+++||+.||+||-
T Consensus        21 Ge~Vs~leH~LQ~A~lA~~~Gad--~elvvAALLHDIGhl   58 (179)
T TIGR03276        21 GEAVSQLEHALQCAQLAEAAGAD--DELIVAAFLHDIGHL   58 (179)
T ss_pred             CCCCcHHHHHHHHHHHHHHcCCC--HHHHHHHHHHhcchh
Confidence            3344446888888732   1111  245899999999984

This small clade of proteins are found adjacent to other genes implicated in the catabolism of phosphonates. They are members of the TIGR00277 domain family and contain a series of five invariant histidines (the domain in general has only four).

>TIGR03760 ICE_TraI_Pfluor integrating conjugative element relaxase, PFL_4751 family

Probab=85.41  E-value=1.5  Score=30.85  Aligned_cols=15  Identities=40%  Similarity=0.472  Sum_probs=13.6

Q ss_pred             HHHHHHHHHhcCCCC
Q psy17172         47 MASLLAAVAHDLDHP   61 (80)
Q Consensus        47 ~a~l~aal~HDv~Hp   61 (80)
                      .+++.||++||+|-+
T Consensus       106 ~~~~~aaLlHDlgK~  120 (218)
T TIGR03760       106 AAVFYAALLHDLGKL  120 (218)
T ss_pred             HHHHHHHHHHhhhhh
Confidence            589999999999876

Members of this protein family are the TraI putative relaxases required for transfer by a subclass of integrating conjugative elements (ICE) as found in Pseudomonas fluorescens Pf-5, and understood from study of two related ICE, SXT and R391. This model represents the N-terminal domain. Note that no homology is detected to the similarly named TraI relaxase of the F plasmid.

>TIGR00277 HDIG uncharacterized domain HDIG

Probab=85.25  E-value=1.5  Score=24.28  Aligned_cols=19  Identities=21%  Similarity=0.295  Sum_probs=15.3

Q ss_pred             HHHHHHHHhcCCCCCCchH
Q psy17172         48 ASLLAAVAHDLDHPGVNQP   66 (80)
Q Consensus        48 a~l~aal~HDv~HpG~~N~   66 (80)
                      .+.+||++||+|-+.....
T Consensus        29 ~l~~AalLHDiG~~~~~~~   47 (80)
T TIGR00277        29 LARRGALLHDIGKPITREG   47 (80)
T ss_pred             HHHHHHHHHccCCcccchH
Confidence            4779999999998876543

This domain is found in a few known nucleotidyltransferes and in a large number of uncharacterized proteins. It contains four widely separated His residues, the second of which is part of an invariant dipeptide His-Asp in a region matched approximately by the motif HDIG.

>PRK05318 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional

Probab=84.86  E-value=0.63  Score=35.83  Aligned_cols=16  Identities=31%  Similarity=0.478  Sum_probs=12.4

Q ss_pred             HHHHHHHhcCCCCCCc
Q psy17172         49 SLLAAVAHDLDHPGVN   64 (80)
Q Consensus        49 ~l~aal~HDv~HpG~~   64 (80)
                      +-.|||+||+|||=..
T Consensus        95 ~~a~~L~HDiGhpPfg  110 (432)
T PRK05318         95 IESLCLAHDIGHPPFG  110 (432)
T ss_pred             HHHHHHHhcCCCCCCc
Confidence            4578899999999443

>COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]

Probab=84.04  E-value=1.3  Score=32.69  Aligned_cols=43  Identities=21%  Similarity=0.227  Sum_probs=36.1

Q ss_pred             CCChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHHHh
Q psy17172         28 YHNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLIA   70 (80)
Q Consensus        28 yHN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~~   70 (80)
                      ..+..|...|+         -.+++.++..+.+||+.||+|--|..+.-+.+
T Consensus       147 ~~t~~Hs~~va~~a~~ia~~lgl~~~~i~~l~~aalLHDIGKi~ip~~IL~K  198 (344)
T COG2206         147 DYTYGHSVRVAELAEAIAKKLGLSEEKIEELALAGLLHDIGKIGIPDSILNK  198 (344)
T ss_pred             hhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcccccCCHHHhCC
Confidence            34788999998         35789999999999999999999988876644

>PRK03007 deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional

Probab=83.69  E-value=0.75  Score=35.50  Aligned_cols=36  Identities=22%  Similarity=0.323  Sum_probs=22.6

Q ss_pred             CCCh-hhhhhhhhh---c-hH--HHHHHHHHHHHHhcCCCCCC
Q psy17172         28 YHNS-IHATDIKRH---L-TH--LEIMASLLAAVAHDLDHPGV   63 (80)
Q Consensus        28 yHN~-~Ha~dv~~~---l-~~--~~~~a~l~aal~HDv~HpG~   63 (80)
                      |||. +|+..|++.   + ..  .+.-.+-.|||+||+|||=.
T Consensus        68 ~~tRltHslev~~~~r~~~~~~~~~~~~~~~~~l~hd~GhpPf  110 (428)
T PRK03007         68 PRTRLTHSLEVAQIGRGIAAGLGCDPDLVDLAGLAHDIGHPPY  110 (428)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCC
Confidence            4554 788888821   1 11  11224668999999999943

>PRK10885 cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed

Probab=82.93  E-value=0.96  Score=34.45  Aligned_cols=38  Identities=24%  Similarity=0.322  Sum_probs=24.7

Q ss_pred             CCCCCC----hhhhhhhhhhchHH-HHHHHHHHHHHhcCCCCC
Q psy17172         25 TNPYHN----SIHATDIKRHLTHL-EIMASLLAAVAHDLDHPG   62 (80)
Q Consensus        25 ~~pyHN----~~Ha~dv~~~l~~~-~~~a~l~aal~HDv~HpG   62 (80)
                      ...||.    +.|...+++.+..+ .-..+.+||++||+|-|.
T Consensus       219 ~~~~H~e~dv~~Htl~~l~~~~~l~~~l~lr~AaLlHDlGK~~  261 (409)
T PRK10885        219 PAKWHPEIDTGIHTLMVLDQAAKLSPSLDVRFAALCHDLGKGL  261 (409)
T ss_pred             CcCCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHhccccCCC
Confidence            455664    57877776433221 123588999999999764

>TIGR00295 conserved hypothetical protein TIGR00295

Probab=81.18  E-value=1.5  Score=29.15  Aligned_cols=43  Identities=14%  Similarity=0.255  Sum_probs=29.5

Q ss_pred             HHhhCCCCCCCCChhhhhhhh-------hhch----HHHHHHHHHHHHHhcCCCCC
Q psy17172         18 IEEGYHGTNPYHNSIHATDIK-------RHLT----HLEIMASLLAAVAHDLDHPG   62 (80)
Q Consensus        18 i~~~Y~~~~pyHN~~Ha~dv~-------~~l~----~~~~~a~l~aal~HDv~HpG   62 (80)
                      +-+.|.  .|=+.+.|...|+       ..+.    +.+.-.+.+||+.||+|-..
T Consensus         4 ll~~~~--~~~~~~~Hs~~Va~~A~~ia~~~~~~~~~~d~~~l~~aaLLHDIGK~~   57 (164)
T TIGR00295         4 LLDKYK--CDESVRRHCLAVARVAMELAENIRKKGHEVDMDLVLKGALLHDIGRAR   57 (164)
T ss_pred             HHHHhC--CCccHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHhcCCccc
Confidence            445564  4555889998887       2222    24566789999999998644

This set of orthologs is narrowly defined, comprising proteins found in three Archaea but not in Pyrococcus horikoshii. The closest homologs are other archaeal proteins that appear to be represent distinct orthologous clusters.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	80
1zkl_A	353	Multiple Determinants For Inhibitor Selectivity Of		1e-18
3g3n_A	318	Pde7a Catalytic Domain In Complex With 3-(2,6- Difl		2e-18
3ecm_A	338	Crystal Structure Of The Unliganded Pde8a Catalytic		1e-10
2qym_A	358	Crystal Structure Of Unliganded Pde4c2 Length = 358		6e-10
2qyn_A	328	Crystal Structure Of Pde4d2 In Complex With Inhibit		1e-09
3g4g_A	421	Crystal Structure Of Human Phosphodiesterase 4d Wit		1e-09
1tb7_A	332	Catalytic Domain Of Human Phosphodiesterase 4d In C		1e-09
1zkn_A	334	Structure Of Pde4d2-Ibmx Length = 334		1e-09
1mkd_A	328	Crystal Structure Of Pde4d Catalytic Domain And Zar		1e-09
3sl5_A	359	Crystal Structure Of The Catalytic Domain Of Pde4d2		1e-09
3iad_A	377	Crystal Structure Of Human Phosphodiesterase 4d Wit		1e-09
2fm0_A	361	Crystal Structure Of Pde4d In Complex With L-869298		1e-09
1xom_A	349	Catalytic Domain Of Human Phosphodiesterase 4d In C		1e-09
1q9m_A	360	Three Dimensional Structures Of Pde4d In Complex Wi		1e-09
3g4i_A	381	Crystal Structure Of Human Phosphodiesterase 4d Wit		1e-09
1xoz_A	364	Catalytic Domain Of Human Phosphodiesterase 5a In C		3e-09
1t9s_A	347	Catalytic Domain Of Human Phosphodiesterase 5a In C		4e-09
3hc8_A	324	Investigation Of Aminopyridiopyrazinones As Pde5 In		4e-09
2chm_A	326	Crystal Structure Of N2 Substituted Pyrazolo Pyrimi		4e-09
2pw3_A	327	Structure Of The Pde4d-Camp Complex Length = 327		5e-09
3itm_A	345	Catalytic Domain Of Hpde2a Length = 345		3e-07
1z1l_A	345	The Crystal Structure Of The Phosphodiesterase 2a C		3e-07
3bjc_A	878	Crystal Structure Of The Pde5a Catalytic Domain In		4e-07
3g45_A	421	Crystal Structure Of Human Phosphodiesterase 4b Wit		5e-07
3o0j_A	323	Pde4b In Complex With Ligand An2898 Length = 323		5e-07
2qyl_A	337	Crystal Structure Of Pde4b2b In Complex With Inhibi		5e-07
3ly2_A	357	Catalytic Domain Of Human Phosphodiesterase 4b In C		6e-07
3d3p_A	353	Crystal Structure Of Pde4b Catalytic Domain In Comp		6e-07
1ro6_A	378	Crystal Structure Of Pde4b2b Complexed With Rolipra		6e-07
3hmv_A	378	Catalytic Domain Of Human Phosphodiesterase 4b2b In		6e-07
1f0j_A	377	Catalytic Domain Of Human Phosphodiesterase 4b2b Le		6e-07
1tb5_A	381	Catalytic Domain Of Human Phosphodiesterase 4b In C		7e-07
3ibj_A	691	X-Ray Structure Of Pde2a Length = 691		7e-07
3kkt_A	398	Crystal Structure Of Human Pde4b With 5-[3-[(1s,2s,		7e-07
1xlx_A	398	Catalytic Domain Of Human Phosphodiesterase 4b In C		7e-07
1xm4_A	398	Catalytic Domain Of Human Phosphodiesterase 4b In C		8e-07
1xlz_A	398	Catalytic Domain Of Human Phosphodiesterase 4b In C		8e-07
1xm6_A	398	Catalytic Domain Of Human Phosphodiesterase 4b In C		8e-07
2qyk_A	335	Crystal Structure Of Pde4a10 In Complex With Inhibi		8e-07
3tvx_A	338	The Structure Of Pde4a With Pentoxifylline At 2.84a		8e-07
1t9r_A	366	Catalytic Domain Of Human Phosphodiesterase 5a Leng		9e-07
3i8v_A	354	Crystal Structure Of Human Pde4a With 4-(3-butoxy-4		1e-06
1udt_A	324	Crystal Structure Of Human Phosphodiesterase 5 Comp		1e-06
1rkp_A	326	Crystal Structure Of Pde5a1-Ibmx Length = 326		1e-06
3shy_A	347	Crystal Structure Of The Pde5a1 Catalytic Domain In		1e-06
2h40_A	326	Crystal Structure Of The Catalytic Domain Of Unliga		1e-06
1taz_A	365	Catalytic Domain Of Human Phosphodiesterase 1b Leng		1e-06
3jwq_A	330	Crystal Structure Of Chimeric Pde5/pde6 Catalytic D		1e-06
3v93_A	345	Unliganded Structure Of Tcrpdec1 Catalytic Domain L		1e-06
3b2r_A	330	Crystal Structure Of Pde5a1 Catalytic Domain In Com		1e-06
2r8q_A	359	Structure Of Lmjpdeb1 In Complex With Ibmx Length =		6e-05
3qi3_A	533	Crystal Structure Of Pde9a(Q453e) In Complex With I		8e-05
2yy2_A	333	Crystal Structure Of The Human Phosphodiesterase 9a		2e-04
2hd1_A	326	Crystal Structure Of Pde9 In Complex With Ibmx Leng		2e-04
3n3z_A	326	Crystal Structure Of Pde9a (E406a) Mutant In Comple		2e-04
3dy8_A	329	Human Phosphodiesterase 9 In Complex With Product 5		3e-04
1so2_A	420	Catalytic Domain Of Human Phosphodiesterase 3b In C		6e-04

>pdb|1ZKL|A Chain A, Multiple Determinants For Inhibitor Selectivity Of Cyclic Nucleotide Phosphodiesterases Length = 353

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 13/93 (13%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
           +E+F+LD++++ +   +I+E YH  NPYHN++HA D+ + +             T  +I+
Sbjct: 55  IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 114
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
            SL+AA  HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 115 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 147

>pdb|3G3N|A Chain A, Pde7a Catalytic Domain In Complex With 3-(2,6- Difluorophenyl)-2-(Methylthio)quinazolin-4(3h)-One Length = 318

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 13/93 (13%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHL-------------THLEIM 47
           +E+F+LD++++ +   +I+E YH  NPYHN++HA D+ + +             T  +I+
Sbjct: 46  IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 105
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
            SL+AA  HDLDHPGVNQPFLI T+++LA LY+
Sbjct: 106 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLYK 138

>pdb|3ECM|A Chain A, Crystal Structure Of The Unliganded Pde8a Catalytic Domain Length = 338

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 3   HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMAS 49
           H +   +R W    +IE  YH +NPYHNS H+ D             IK  L  ++ +A+
Sbjct: 51  HCSESTLRSW--LQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAA 108
Query: 50  LLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           L+AA  HD+DHPG    FL    + LA LY
Sbjct: 109 LIAATIHDVDHPGRTNSFLCNAGSELAILY 138

>pdb|2QYM|A Chain A, Crystal Structure Of Unliganded Pde4c2 Length = 358

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 17  LIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGV 63
           ++E  YH    YHNS+HA D+ +               T LEI+A+L A+  HD+DHPGV
Sbjct: 71  MLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGV 130
Query: 64  NQPFLIATSNHLAALY 79
           +  FLI T++ LA +Y
Sbjct: 131 SNQFLINTNSELALMY 146

>pdb|2QYN|A Chain A, Crystal Structure Of Pde4d2 In Complex With Inhibitor Npv Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  HD+DHPGV+
Sbjct: 64  LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 123
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138

>pdb|3G4G|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With Regulatory Domain And D155871 Length = 421

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  HD+DHPGV+
Sbjct: 151 LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 210
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 211 NQFLINTNSELALMY 225

>pdb|1TB7|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex With Amp Length = 332

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  HD+DHPGV+
Sbjct: 68  LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 127
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 128 NQFLINTNSELALMY 142

>pdb|1ZKN|A Chain A, Structure Of Pde4d2-Ibmx Length = 334

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  HD+DHPGV+
Sbjct: 71  LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 130
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 131 NQFLINTNSELALMY 145

>pdb|1MKD|A Chain A, Crystal Structure Of Pde4d Catalytic Domain And Zardaverine Complex Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  HD+DHPGV+
Sbjct: 64  LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVS 123
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138

>pdb|3SL5|A Chain A, Crystal Structure Of The Catalytic Domain Of Pde4d2 Complexed With Compound 10d Length = 359

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 54  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145

>pdb|3IAD|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With Bound Allosteric Modulator Length = 377

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 56  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 115
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 116 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 147

>pdb|2FM0|A Chain A, Crystal Structure Of Pde4d In Complex With L-869298 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 54  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145

>pdb|1XOM|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4d In Complex With Cilomilast Length = 349

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 68  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 127
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 128 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 159

>pdb|1Q9M|A Chain A, Three Dimensional Structures Of Pde4d In Complex With Roliprams And Implication On Inhibitor Selectivity Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 54  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 113
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 114 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 145

>pdb|3G4I|A Chain A, Crystal Structure Of Human Phosphodiesterase 4d With D155871 Length = 381

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D+ +               T LEI+
Sbjct: 56  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 115
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 116 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 147

>pdb|1XOZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex With Tadalafil Length = 364

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDHPGV+
Sbjct: 90  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 149
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 150 NQFLINTNSELALMY 164

>pdb|1T9S|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a In Complex With Gmp Length = 347

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDHPGV+
Sbjct: 90  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 149
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 150 NQFLINTNSELALMY 164

>pdb|3HC8|A Chain A, Investigation Of Aminopyridiopyrazinones As Pde5 Inhibitors: Evaluation Of Modifications To The Central Ring System. Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDHPGV+
Sbjct: 67  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 126
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 127 NQFLINTNSELALMY 141

>pdb|2CHM|A Chain A, Crystal Structure Of N2 Substituted Pyrazolo Pyrimidinones- A Flipped Binding Mode In Pde5 Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDHPGV+
Sbjct: 69  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVS 128
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 129 NQFLINTNSELALMY 143

>pdb|2PW3|A Chain A, Structure Of The Pde4d-Camp Complex Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHN+IHA D+ +               T LEI+A++ A+  H++DHPGV+
Sbjct: 64  LEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHNVDHPGVS 123
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 124 NQFLINTNSELALMY 138

>pdb|3ITM|A Chain A, Catalytic Domain Of Hpde2a Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
           + ++ +D   + +   ++++GY    PYHN +HA              ++  +L  +EI 
Sbjct: 55  INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 113
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A  ++ + HDLDH G N  F +A+ + LAALY
Sbjct: 114 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 145

>pdb|1Z1L|A Chain A, The Crystal Structure Of The Phosphodiesterase 2a Catalytic Domain Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
           + ++ +D   + +   ++++GY    PYHN +HA              ++  +L  +EI 
Sbjct: 55  INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 113
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A  ++ + HDLDH G N  F +A+ + LAALY
Sbjct: 114 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 145

>pdb|3BJC|A Chain A, Crystal Structure Of The Pde5a Catalytic Domain In Complex With A Novel Inhibitor Length = 878

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 605 VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 664
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 665 NSYIQRSEHPLAQLY 679

>pdb|3G45|A Chain A, Crystal Structure Of Human Phosphodiesterase 4b With Regulatory Domain And D155988 Length = 421

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 151 LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 210
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 211 NQFLINTNSELALMY 225

>pdb|3O0J|A Chain A, Pde4b In Complex With Ligand An2898 Length = 323

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 62  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 121
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 122 NQFLINTNSELALMY 136

>pdb|2QYL|A Chain A, Crystal Structure Of Pde4b2b In Complex With Inhibitor Npv Length = 337

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 73  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147

>pdb|3LY2|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex Wi Coumarin-Based Inhibitor Length = 357

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|3D3P|A Chain A, Crystal Structure Of Pde4b Catalytic Domain In Complex With A Pyrazolopyridine Inhibitor Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 73  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147

>pdb|1RO6|A Chain A, Crystal Structure Of Pde4b2b Complexed With Rolipram (r & S) Length = 378

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 73  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147

>pdb|3HMV|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b In Complex Tetrahydrobenzothiophene Inhibitor Length = 378

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 73  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 132
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 133 NQFLINTNSELALMY 147

>pdb|1F0J|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b2b Length = 377

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 72  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 131
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 132 NQFLINTNSELALMY 146

>pdb|1TB5|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex With Amp Length = 381

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 76  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 135
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 136 NQFLINTNSELALMY 150

>pdb|3IBJ|A Chain A, X-Ray Structure Of Pde2a Length = 691

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIM 47
           + ++ +D   + +   ++++GY    PYHN +HA              ++  +L  +EI 
Sbjct: 416 INNYKIDCPTLARFCLMVKKGYRDP-PYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 474
Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A  ++ + HDLDH G N  F +A+ + LAALY
Sbjct: 475 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 506

>pdb|3KKT|A Chain A, Crystal Structure Of Human Pde4b With 5-[3-[(1s,2s,4r)- Bicyclo[2.2.1]hept-2-Yloxy]-4-Methoxyp Henyl]tetrahydro-2(1h)- Pyrimidinone Reveals Ordering Of The C-Terminal Helix Residues 502- 509. Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|1XLX|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex With Cilomilast Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|1XM4|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex With Piclamilast Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|1XLZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex With Filaminast Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|1XM6|A Chain A, Catalytic Domain Of Human Phosphodiesterase 4b In Complex With (R)- Mesopram Length = 398

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A++ AA  HD+DHPGV+
Sbjct: 93  LEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|2QYK|A Chain A, Crystal Structure Of Pde4a10 In Complex With Inhibitor Npv Length = 335

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A+L AA  HD+DHPGV+
Sbjct: 74  LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 133
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 134 NQFLINTNSELALMY 148

>pdb|3TVX|A Chain A, The Structure Of Pde4a With Pentoxifylline At 2.84a Resolution Length = 338

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A+L AA  HD+DHPGV+
Sbjct: 77  LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 136
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 137 NQFLINTNSELALMY 151

>pdb|1T9R|A Chain A, Catalytic Domain Of Human Phosphodiesterase 5a Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 93  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 152
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 153 NSYIQRSEHPLAQLY 167

>pdb|3I8V|A Chain A, Crystal Structure Of Human Pde4a With 4-(3-butoxy-4-methoxyphenyl) Methyl-2-imidazolidone Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATDIKRH-------------LTHLEIMASLLAAVAHDLDHPGVN 64
           +E+ YH    YHNS+HA D+ +               T LEI+A+L AA  HD+DHPGV+
Sbjct: 93  LEDHYHADVAYHNSLHAADVLQSTHVLLATPALDAVFTDLEILAALFAAAIHDVDHPGVS 152
Query: 65  QPFLIATSNHLAALY 79
             FLI T++ LA +Y
Sbjct: 153 NQFLINTNSELALMY 167

>pdb|1UDT|A Chain A, Crystal Structure Of Human Phosphodiesterase 5 Complexed With Sildenafil(Viagra) Length = 324

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 66  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 125
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 126 NSYIQRSEHPLAQLY 140

>pdb|1RKP|A Chain A, Crystal Structure Of Pde5a1-Ibmx Length = 326

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 68  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 127
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 128 NSYIQRSEHPLAQLY 142

>pdb|3SHY|A Chain A, Crystal Structure Of The Pde5a1 Catalytic Domain In Complex With Novel Inhibitors Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 89  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 148
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 149 NSYIQRSEHPLAQLY 163

>pdb|2H40|A Chain A, Crystal Structure Of The Catalytic Domain Of Unliganded Pde5 Length = 326

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 68  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 127
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 128 NSYIQRSEHPLAQLY 142

>pdb|1TAZ|A Chain A, Catalytic Domain Of Human Phosphodiesterase 1b Length = 365

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 1   MEHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIKRH-------------LTHLEI 46
           +  F +  V +      +E GY    NPYHN IHA D+ +              L+ +E+
Sbjct: 53  ISRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHXFLLRTGMVHCLSEIEL 112
Query: 47  MASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +A + AA  HD +H G    F I T +  A +Y
Sbjct: 113 LAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVY 145

>pdb|3JWQ|A Chain A, Crystal Structure Of Chimeric Pde5/pde6 Catalytic Domain Complexed With Sildenafil Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 72  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 131
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 132 NSYIQRSEHPLAQLY 146

>pdb|3V93|A Chain A, Unliganded Structure Of Tcrpdec1 Catalytic Domain Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 12  WKLFSLIEEGYHGTNPYHNSIHATDIKR--------------HLTHLEIMASLLAAVAHD 57
           W       E  +  NPYHN+IHA D+ +              HLT LE  A+  AA+ HD
Sbjct: 82  WAFLVAAVENNYRPNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKAAAFAALTHD 141
Query: 58  LDHPGVNQPFLIATSNHLA 76
           + HPG    FL A  + ++
Sbjct: 142 VCHPGRTNAFLAAVQDPVS 160

>pdb|3B2R|A Chain A, Crystal Structure Of Pde5a1 Catalytic Domain In Complex With Vardenafil Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 18  IEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIMASLLAAVAHDLDHPGVN 64
           +++ Y     YHN  HA +             I+  LT LEI+A L+AA++HDLDH GVN
Sbjct: 72  VKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVN 131
Query: 65  QPFLIATSNHLAALY 79
             ++  + + LA LY
Sbjct: 132 NSYIQRSEHPLAQLY 146

>pdb|2R8Q|A Chain A, Structure Of Lmjpdeb1 In Complex With Ibmx Length = 359

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 13/65 (20%)
Query: 27  PYHNSIHATDI-------------KRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSN 73
           PYHN  H  D+                LT LE    L+ A+ HDLDH GVN  F + T +
Sbjct: 98  PYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHMGVNNSFYLKTDS 157
Query: 74  HLAAL 78
            L  L
Sbjct: 158 PLGIL 162

>pdb|3QI3|A Chain A, Crystal Structure Of Pde9a(Q453e) In Complex With Inhibitor Bay73-6691 Length = 533

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4   FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
           F+++ V + +    + + Y   NP+HN  H                ++   +  +I+  +
Sbjct: 228 FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 286
Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            AA+ HDLDHPG N  + I     LA  Y
Sbjct: 287 TAAICHDLDHPGYNNTYQINARTELAVRY 315

>pdb|2YY2|A Chain A, Crystal Structure Of The Human Phosphodiesterase 9a Catalytic Domain Complexed With Ibmx Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4   FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
           F+++ V + +    + + Y   NP+HN  H                ++   +  +I+  +
Sbjct: 55  FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 113
Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            AA+ HDLDHPG N  + I     LA  Y
Sbjct: 114 TAAICHDLDHPGYNNTYQINARTELAVRY 142

>pdb|2HD1|A Chain A, Crystal Structure Of Pde9 In Complex With Ibmx Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4   FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
           F+++ V + +    + + Y   NP+HN  H                ++   +  +I+  +
Sbjct: 48  FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 106
Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            AA+ HDLDHPG N  + I     LA  Y
Sbjct: 107 TAAICHDLDHPGYNNTYQINARTELAVRY 135

>pdb|3N3Z|A Chain A, Crystal Structure Of Pde9a (E406a) Mutant In Complex With Ibmx Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4   FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
           F+++ V + +    + + Y   NP+HN  H                ++   +  +I+  +
Sbjct: 48  FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 106
Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            AA+ HDLDHPG N  + I     LA  Y
Sbjct: 107 TAAICHDLDHPGYNNTYQINARTELAVRY 135

>pdb|3DY8|A Chain A, Human Phosphodiesterase 9 In Complex With Product 5'-gmp (e+p Complex) Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 4   FNLDVVRVWKLFSLIEEGYHGTNPYHNSIHA-------------TDIKRHLTHLEIMASL 50
           F+++ V + +    + + Y   NP+HN  H                ++   +  +I+  +
Sbjct: 51  FSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILM 109
Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            AA+ HDLDHPG N  + I     LA  Y
Sbjct: 110 TAAICHDLDHPGYNNTYQINARTELAVRY 138

>pdb|1SO2|A Chain A, Catalytic Domain Of Human Phosphodiesterase 3b In Complex With A Dihydropyridazine Inhibitor Length = 420

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 37  IKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +  ++  LE+MA  +AA  HD DHPG    FL+AT+   A LY
Sbjct: 149 LSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLY 191

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	80
3ecm_A	338	High affinity CAMP-specific and IBMX-insensitive 3	1e-26
1tbf_A	347	CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5	1e-26
1f0j_A	377	PDE4B, phosphodiesterase 4B; PDE phosphodiesterase	1e-25
3g4g_A	421	DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodi	5e-25
1y2k_A	349	DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodi	5e-25
1zkl_A	353	HCP1, TM22, high-affinity CAMP-specific 3',5'-cycl	1e-24
3qi3_A	533	High affinity CGMP-specific 3',5'-cyclic phosphod	3e-23
3itu_A	345	CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-	3e-23
2r8q_A	359	Class I phosphodiesterase PDEB1; leishimaniasis, p	7e-23
3dyn_A	329	High affinity CGMP-specific 3',5'-cyclic phosphod	7e-23
1taz_A	365	Calcium/calmodulin-dependent 3',5'-cyclic nucleot	1e-22
3v93_A	345	Cyclic nucleotide specific phosphodiesterase; para	8e-22
3bjc_A	878	CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5	2e-21
2our_A	331	CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphod	7e-21
3hr1_A	380	CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphod	9e-20
3ibj_A	691	CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE	4e-17
1so2_A	420	CGMP-inhibited 3',5'-cyclic phosphodiesterase B; P	3e-12
1so2_A	420	CGMP-inhibited 3',5'-cyclic phosphodiesterase B; P	7e-05

>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} PDB: 3ecn_A* Length = 338

 Score = 98.0 bits (244), Expect = 1e-26
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
            E  +     +     +IE  YH +NPYHNS H+ D             IK  L  ++ +
Sbjct: 47  CEFLHCSESTLRSWLQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEV 106

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A+L+AA  HD+DHPG    FL    + LA LY
Sbjct: 107 AALIAATIHDVDHPGRTNSFLCNAGSELAILY 138

>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ... Length = 347

 Score = 97.9 bits (244), Expect = 1e-26
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++F +    + +    +++ Y     YHN  HA +             I+  LT LEI+
Sbjct: 73  VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEIL 132

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A L+AA++HDLDHPGV+  FLI T++ LA +Y
Sbjct: 133 ALLIAALSHDLDHPGVSNQFLINTNSELALMY 164

>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ... Length = 377

 Score = 96.1 bits (239), Expect = 1e-25
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           ++ F +           +E+ YH    YHNS+HA D             +    T LEI+
Sbjct: 55  LKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEIL 114

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ AA  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 115 AAIFAAAIHDVDHPGVSNQFLINTNSELALMY 146

>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A* Length = 421

 Score = 94.6 bits (235), Expect = 5e-25
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D             ++   T LEI+
Sbjct: 134 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 193

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 194 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 225

>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ... Length = 349

 Score = 93.7 bits (233), Expect = 5e-25
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D             ++   T LEI+
Sbjct: 68  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 127

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 128 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 159

>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A* Length = 353

 Score = 92.9 bits (231), Expect = 1e-24
 Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +E+F+LD++++ +   +I+E YH  NPYHN++HA D             +   +T  +I+
Sbjct: 55  IEYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDIL 114

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
            SL+AA  HDLDHPGVNQPFLI T+++LA LY
Sbjct: 115 LSLIAAATHDLDHPGVNQPFLIKTNHYLATLY 146

>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A* Length = 533

 Score = 90.1 bits (223), Expect = 3e-23
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +  F+++ V + +    + + Y   NP+HN  H                ++   +  +I+
Sbjct: 225 VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDIL 283

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
             + AA+ HDLDHPG N  + I     LA  Y
Sbjct: 284 ILMTAAICHDLDHPGYNNTYQINARTELAVRY 315

>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A Length = 345

 Score = 89.1 bits (221), Expect = 3e-23
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           + ++ +D   + +   ++++GY    PYHN +HA               +  +L  +EI 
Sbjct: 55  INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 113

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A  ++ + HDLDH G N  F +A+ + LAALY
Sbjct: 114 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 145

>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major} Length = 359

 Score = 88.4 bits (219), Expect = 7e-23
 Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 14/93 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
            E F      +          Y    PYHN  H  D                 LT LE  
Sbjct: 73  PEKFGCREQTLLNFILQCRRRYR-RVPYHNFYHVVDVCQTLHTYLYTGKASELLTELECY 131

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE 80
             L+ A+ HDLDH GVN  F + T + L  L  
Sbjct: 132 VLLVTALVHDLDHMGVNNSFYLKTDSPLGILSS 164

>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 3n3z_A* Length = 329

 Score = 88.0 bits (218), Expect = 7e-23
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +  F+++ V + +    + + Y   NP+HN  H                ++   +  +I+
Sbjct: 48  VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDIL 106

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
             + AA+ HDLDHPG N  + I     LA  Y
Sbjct: 107 ILMTAAICHDLDHPGYNNTYQINARTELAVRY 138

>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2 Length = 365

 Score = 87.6 bits (217), Expect = 1e-22
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 14/93 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYH-GTNPYHNSIHATD-------------IKRHLTHLEI 46
           +  F +  V +      +E GY    NPYHN IHA D             +   L+ +E+
Sbjct: 53  ISRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIEL 112

Query: 47  MASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +A + AA  HD +H G    F I T +  A +Y
Sbjct: 113 LAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVY 145

>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A* Length = 345

 Score = 85.2 bits (211), Expect = 8e-22
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 3   HFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD--------------IKRHLTHLEIMA 48
             + +  + W       E  +  NPYHN+IHA D              +  HLT LE  A
Sbjct: 73  FASQEEAQKWAFLVAAVENNYRPNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKA 132

Query: 49  SLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +  AA+ HD+ HPG    FL A  + ++  +
Sbjct: 133 AAFAALTHDVCHPGRTNAFLAAVQDPVSFKF 163

>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A* Length = 878

 Score = 85.2 bits (210), Expect = 2e-21
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++F +    + +    +++ Y     YHN  HA +             I+  LT LEI+
Sbjct: 588 VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEIL 647

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A L+AA++HDLDH GVN  ++  + + LA LY
Sbjct: 648 ALLIAALSHDLDHRGVNNSYIQRSEHPLAQLY 679

>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ... Length = 331

 Score = 82.5 bits (204), Expect = 7e-21
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 12/89 (13%)

Query: 2   EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDI-----------KRHLTHLEIMASL 50
                ++ ++ +    +++ Y    PYHN  HA  +               T LE    L
Sbjct: 54  GTSCFELEKLCRFIMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLL 112

Query: 51  LAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +A + HDLDH G +  +L    + LAALY
Sbjct: 113 IACLCHDLDHRGFSNSYLQKFDHPLAALY 141

>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A* Length = 380

 Score = 79.9 bits (197), Expect = 9e-20
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 14/90 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDI-----------KRHLTHLEIMAS 49
              F L+ +  +     +++ Y    PYHN  HA  +               T LE    
Sbjct: 86  TSCFELEKLCRF--IMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGL 142

Query: 50  LLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           L+A + HDLDH G +  +L    + LAALY
Sbjct: 143 LIACLCHDLDHRGFSNSYLQKFDHPLAALY 172

>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens} Length = 691

 Score = 72.8 bits (178), Expect = 4e-17
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           + ++ +D   + +   ++++GY    PYHN +HA               +  +L  +EI 
Sbjct: 416 INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIF 474

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A  ++ + HDLDH G N  F +A+ + LAALY
Sbjct: 475 ALFISCMCHDLDHRGTNNSFQVASKSVLAALY 506

>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A* Length = 420

 Score = 58.9 bits (142), Expect = 3e-12
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 22  YHGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
               +  +       +  ++  LE+MA  +AA  HD DHPG    FL+AT+   A LY
Sbjct: 134 ISSKSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLY 191

>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A* Length = 420

 Score = 38.1 bits (88), Expect = 7e-05
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 1  MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRHLTHL 44
          +E F +   +    F  +E GY    PYHN IHATD+   + +L
Sbjct: 57 LEIFKIPTQQFMNYFRALENGYR-DIPYHNRIHATDVLHAVWYL 99

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	80
3ecm_A	338	High affinity CAMP-specific and IBMX-insensitive 3	99.98
3itu_A	345	CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-	99.97
1y2k_A	349	DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodi	99.97
3dyn_A	329	High affinity CGMP-specific 3',5'-cyclic phosphod	99.97
1tbf_A	347	CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5	99.97
1zkl_A	353	HCP1, TM22, high-affinity CAMP-specific 3',5'-cycl	99.97
1f0j_A	377	PDE4B, phosphodiesterase 4B; PDE phosphodiesterase	99.97
2our_A	331	CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphod	99.97
3g4g_A	421	DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodi	99.97
2r8q_A	359	Class I phosphodiesterase PDEB1; leishimaniasis, p	99.97
3hr1_A	380	CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphod	99.97
1taz_A	365	Calcium/calmodulin-dependent 3',5'-cyclic nucleot	99.97
1so2_A	420	CGMP-inhibited 3',5'-cyclic phosphodiesterase B; P	99.97
3ibj_A	691	CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE	99.97
3qi3_A	533	High affinity CGMP-specific 3',5'-cyclic phosphod	99.97
3v93_A	345	Cyclic nucleotide specific phosphodiesterase; para	99.97
3bjc_A	878	CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5	99.96
2qgs_A	225	Protein Se1688; alpha-helical protein, structural	95.53
3dto_A	223	BH2835 protein; all alpha-helical protein, structu	95.48
3irh_A	480	HD domain protein; phosphohydrolase, dntpase, stru	95.46
2pjq_A	231	Uncharacterized protein LP_2664; LPR71, NESG, stru	95.4
3b57_A	209	LIN1889 protein; Q92AN1, X-RAY, NESG, structural g	95.39
3djb_A	223	Hydrolase, HD family; all alpha-helical protein.,	94.88
2pq7_A	220	Predicted HD superfamily hydrolase; 104161995, HD	94.77
3u1n_A	528	SAM domain and HD domain-containing protein 1; deo	94.67
2q14_A	410	Phosphohydrolase; BT4208, HD domain, structural ge	94.47
2pgs_A	451	Putative deoxyguanosinetriphosphate triphosphohyd;	92.73
3gw7_A	239	Uncharacterized protein YEDJ; all alpha-helical pr	92.26
3bg2_A	444	DGTP triphosphohydrolase; structural genomics, NYS	92.18
2hek_A	371	Hypothetical protein; predominantly alpha helical	91.08
3ccg_A	190	HD superfamily hydrolase; NP_347894.1, HD domain,	86.87
2dqb_A	376	Deoxyguanosinetriphosphate triphosphohydrolase, P;	86.18
2o08_A	188	BH1327 protein; putative HD superfamily hydrolase,	82.88
2ogi_A	196	Hypothetical protein SAG1661; structural genomics,	82.22

>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A...; phosphodiesterase 8A PDE8A inhibitor selectivity; 1.90A {Homo sapiens} SCOP: a.211.1.0 PDB: 3ecn_A*

Probab=99.98  E-value=6.1e-33  Score=202.39  Aligned_cols=79  Identities=38%  Similarity=0.691  Sum_probs=75.9

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        48 ~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~~e~~all~Aal~HD~~HpG~nN~fl  127 (338)
T 3ecm_A           48 EFLHCSESTLRSWLQIIEANYHSSNPYHNSTHSADVLHATAYFLSKERIKETLDPIDEVAALIAATIHDVDHPGRTNSFL  127 (338)
T ss_dssp             HHHTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHHhccCCCCccchHH
Confidence            5799999999999999999998679999999999999             478999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       128 i~~~s~LA~lYn  139 (338)
T 3ecm_A          128 CNAGSELAILYN  139 (338)
T ss_dssp             HHTTCHHHHHTT
T ss_pred             HHhCCHHHHHcC
Confidence            999999999997

>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A

Probab=99.97  E-value=1e-32  Score=202.16  Aligned_cols=79  Identities=34%  Similarity=0.693  Sum_probs=75.9

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        55 ~~~f~i~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAal~HDv~HpG~nN~f  133 (345)
T 3itu_A           55 INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSF  133 (345)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHTCC-CCSSSSHHHHHHHHHHHHHHHHHHCGGGTSCHHHHHHHHHHHHHTTTTCCSCCHHH
T ss_pred             hhhcCCCHHHHHHHHHHHHHccC-CCCCcCcHHHHHHHHHHHHHHhccchhhhhhHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence            36899999999999999999998 89999999999998             47899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       134 li~t~s~LA~lYn  146 (345)
T 3itu_A          134 QVASKSVLAALYS  146 (345)
T ss_dssp             HHHTTCHHHHHHT
T ss_pred             HHhcCCHHHHHhC
Confidence            9999999999997

>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A* 1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A* 1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A* 3sl6_A* 3sl8_A* 1oyn_A* ...

Probab=99.97  E-value=1e-32  Score=202.08  Aligned_cols=79  Identities=41%  Similarity=0.735  Sum_probs=76.0

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        69 ~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl  148 (349)
T 1y2k_A           69 KTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFL  148 (349)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTSCTTCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             HHcCCCHHHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhhhhHHhhcCHHHHHHHHHHHHhccCCCCCCCcHHH
Confidence            5799999999999999999998789999999999998             368999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       149 i~t~s~LA~lYn  160 (349)
T 1y2k_A          149 INTNSELALMYN  160 (349)
T ss_dssp             HHTTCHHHHHHT
T ss_pred             HhcCCHHHHHcC
Confidence            999999999997

>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; phophodiestrase, enzyme mechanism, hydrolase, manganes binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A* 3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A* 4gh6_A* 3n3z_A*

Probab=99.97  E-value=1e-32  Score=201.16  Aligned_cols=79  Identities=29%  Similarity=0.602  Sum_probs=75.8

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        48 ~~~f~i~~~~L~~fl~~v~~~Y~-~npYHN~~Ha~dV~q~~~~~l~~~~l~~~l~~le~~alliAal~HDv~HpG~nN~f  126 (329)
T 3dyn_A           48 VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTY  126 (329)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHSC-CCSSSSHHHHHHHHHHHHHHHHHTTHHHHSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             hHhcCCCHHHHHHHHHHHHHhcC-CCCCcCcHHHhHHHHHHHHHHHhhhHhhcCCHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence            36899999999999999999998 99999999999998             46899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       127 li~t~s~LA~lYn  139 (329)
T 3dyn_A          127 QINARTELAVRYN  139 (329)
T ss_dssp             HHHHTCHHHHHHT
T ss_pred             HHHhCCHHHHHcC
Confidence            9999999999997

>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...

Probab=99.97  E-value=1.3e-32  Score=201.56  Aligned_cols=80  Identities=39%  Similarity=0.658  Sum_probs=76.4

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        73 ~~~f~i~~~~L~~fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~~N~f  152 (347)
T 1tbf_A           73 VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQF  152 (347)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             HhhcCCCHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHHcccccccCCHHHHHHHHHHHHHccCCCCCCCCch
Confidence            36799999999999999999998679999999999998             47899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       153 li~~~s~LA~lYn  165 (347)
T 1tbf_A          153 LINTNSELALMYN  165 (347)
T ss_dssp             HHHTTCHHHHHTT
T ss_pred             HHhcCCHHHHHcC
Confidence            9999999999997

>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*

Probab=99.97  E-value=1.3e-32  Score=201.93  Aligned_cols=79  Identities=52%  Similarity=0.953  Sum_probs=75.7

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        56 ~~f~i~~~~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl  135 (353)
T 1zkl_A           56 EYFHLDMMKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPGVNQPFL  135 (353)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTSHHHHTTCCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHccCCCCCCcCHHHHHHHHHHHHHHHhhhHHhhhCCHHHHHHHHHHHHHhccCCCCCCcHHH
Confidence            5799999999999999999995599999999999998             478999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       136 i~~~s~LA~lYn  147 (353)
T 1zkl_A          136 IKTNHYLATLYK  147 (353)
T ss_dssp             HHTTCHHHHHTT
T ss_pred             HhcCCHHHHHcC
Confidence            999999999997

>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...

Probab=99.97  E-value=1.4e-32  Score=203.35  Aligned_cols=79  Identities=41%  Similarity=0.722  Sum_probs=76.0

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        56 ~~f~i~~~~L~~Fl~~v~~~Y~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDvdHpG~nN~fl  135 (377)
T 1f0j_A           56 KTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFL  135 (377)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHccCCCCCccCHHHHHHHHHHHHHHHhcchhhhhCCHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            5799999999999999999998789999999999998             368999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       136 i~t~s~LA~lYn  147 (377)
T 1f0j_A          136 INTNSELALMYN  147 (377)
T ss_dssp             HHTTCHHHHHTT
T ss_pred             HhcCCHHHHHcC
Confidence            999999999997

>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...

Probab=99.97  E-value=2.1e-32  Score=199.36  Aligned_cols=79  Identities=30%  Similarity=0.518  Sum_probs=75.9

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-----------hhchHHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-----------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLI   69 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-----------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~   69 (80)
                      +++|+||.++|.+|+..|+++|+ +|||||+.||+||+           ..++++|++|+++||+|||+||||+||.|++
T Consensus        53 ~~~f~i~~~~L~~fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~l~~le~~alliAAl~HDv~HpG~~N~fli  131 (331)
T 2our_A           53 CGTSCFELEKLCRFIMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHDLDHRGFSNSYLQ  131 (331)
T ss_dssp             HCTTSSCHHHHHHHHHHHHHTSC-SCSSSSHHHHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred             HHhcCCCHHHHHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCCCCCCcHHH
Confidence            36799999999999999999998 99999999999999           3789999999999999999999999999999


Q ss_pred             hhcChhHHhcC
Q psy17172         70 ATSNHLAALYE   80 (80)
Q Consensus        70 ~t~~~LA~lYn   80 (80)
                      ++++|||++||
T Consensus       132 ~~~~~LA~lYn  142 (331)
T 2our_A          132 KFDHPLAALYS  142 (331)
T ss_dssp             HTTCHHHHHSC
T ss_pred             hcCCHHHHhcC
Confidence            99999999997

>3g4g_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D; PDE4D, UCR2, alternative splicing, cytoplasm, cytoskeleton, hydrolase, membrane; HET: D71; 2.30A {Homo sapiens} PDB: 3g45_A*

Probab=99.97  E-value=3.3e-32  Score=203.81  Aligned_cols=80  Identities=40%  Similarity=0.738  Sum_probs=76.4

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus       134 ~~~f~I~~~~L~~FL~~ve~~Y~~~~pYHN~~HA~dV~Q~~~~ll~~~~l~~~ls~le~lalliAAl~HDvdHpG~nN~F  213 (421)
T 3g4g_A          134 LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQF  213 (421)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHTSCSSCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             HhhcCCCHHHHHHHHHHHHHcccCCCCCcCcHHHhHHHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHhcCCCCCCCCHH
Confidence            36899999999999999999998789999999999998             47899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       214 li~t~s~LA~lYn  226 (421)
T 3g4g_A          214 LINTNSELALMYN  226 (421)
T ss_dssp             HHHTTCHHHHHHT
T ss_pred             HHHcCCHHHHHcC
Confidence            9999999999997

>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite inhibitor selectivity, CAMP phosphodiesterase, hydrolase; HET: IBM; 1.50A {Leishmania major}

Probab=99.97  E-value=3.6e-32  Score=199.97  Aligned_cols=78  Identities=35%  Similarity=0.520  Sum_probs=75.2

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        74 ~~f~i~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~fl  152 (359)
T 2r8q_A           74 EKFGCREQTLLNFILQCRRRYR-RVPYHNFYHVVDVCQTLHTYLYTGKASELLTELECYVLLVTALVHDLDHMGVNNSFY  152 (359)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTCC-SCSSSSHHHHHHHHHHHHHHHHTSCGGGGSCHHHHHHHHHHHHHTTTTCCSCCHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHhCC-CCccccHHHHHHHHHHHHHHHHcccchhcccHHHHHHHHHHHHHhcCCCCCCCchHh
Confidence            5799999999999999999998 89999999999998             478999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       153 i~~~s~LA~lYn  164 (359)
T 2r8q_A          153 LKTDSPLGILSS  164 (359)
T ss_dssp             HHTTCHHHHHHH
T ss_pred             HhcCCHHHHHcC
Confidence            999999999996

>3hr1_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE 10A, PDE10 inhibitors, allosteric enzyme, alternative splicing; HET: PF9; 1.53A {Rattus norvegicus} PDB: 3hqy_A* 3hqz_A* 3hqw_A*

Probab=99.97  E-value=5.8e-32  Score=200.38  Aligned_cols=79  Identities=30%  Similarity=0.515  Sum_probs=76.0

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-----------hhchHHHHHHHHHHHHHhcCCCCCCchHHHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-----------RHLTHLEIMASLLAAVAHDLDHPGVNQPFLI   69 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-----------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl~   69 (80)
                      +++|+||.++|.+|+..|+++|+ +|||||+.||+||+           ..++++|++|+++||+|||+||||+||.|++
T Consensus        84 ~~~f~I~~~~L~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~lt~le~~alliAAl~HDvdHpG~nN~Fli  162 (380)
T 3hr1_A           84 CGTSCFELEKLCRFIMSVKKNYR-RVPYHNWKHAVTVAHCMYAILQNNNGLFTDLERKGLLIACLCHDLDHRGFSNSYLQ  162 (380)
T ss_dssp             HCTTSSCHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred             hhhcCCCHHHHHHHHHHHHHccC-CCCCcCcHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence            36899999999999999999998 89999999999999           4789999999999999999999999999999


Q ss_pred             hhcChhHHhcC
Q psy17172         70 ATSNHLAALYE   80 (80)
Q Consensus        70 ~t~~~LA~lYn   80 (80)
                      ++++|||++||
T Consensus       163 ~t~s~LA~lYn  173 (380)
T 3hr1_A          163 KFDHPLAALYS  173 (380)
T ss_dssp             HHTCHHHHHCS
T ss_pred             HhCCHHHHHcC
Confidence            99999999997

>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2

Probab=99.97  E-value=4.8e-32  Score=199.72  Aligned_cols=79  Identities=35%  Similarity=0.681  Sum_probs=75.7

Q ss_pred             cccccCHHHHHHHHHHHHhhCCC-CCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~-~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      ++|+||.++|.+|+..|+++|++ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        54 ~~f~i~~~~L~~Fl~~v~~~Y~~~~npYHN~~HA~dV~q~~~~ll~~~~l~~~l~~le~~alliAAl~HDv~HpG~nN~f  133 (365)
T 1taz_A           54 SRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSF  133 (365)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHTTTCCSSSSHHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHhcCcCCCCCcCHHHHHHHHHHHHHHHHhhhHHhhCCHHHHHHHHHHHHHhcCCCCCCccHH
Confidence            57999999999999999999984 79999999999998             47899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       134 li~t~s~LA~lYn  146 (365)
T 1taz_A          134 HIQTKSECAIVYN  146 (365)
T ss_dssp             HHHHTCHHHHHHT
T ss_pred             HHhcCChHHHHcC
Confidence            9999999999997

>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo sapiens} SCOP: a.211.1.2 PDB: 1soj_A*

Probab=99.97  E-value=9.6e-32  Score=201.17  Aligned_cols=78  Identities=44%  Similarity=0.744  Sum_probs=73.3

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhhh------------------------------------------
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR------------------------------------------   39 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~------------------------------------------   39 (80)
                      ++|+||.++|.+|+..|+++|+ +|||||+.||+||++                                          
T Consensus        58 ~~f~I~~~~L~~Fl~~v~~~Y~-~nPYHN~~HA~DV~Q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  136 (420)
T 1so2_A           58 EIFKIPTQQFMNYFRALENGYR-DIPYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISS  136 (420)
T ss_dssp             HHTTCCHHHHHHHHHHHHTTSC-SCSSSSHHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCC
T ss_pred             HhcCCCHHHHHHHHHHHHHhCC-CCCCcCHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccchhhhhc
Confidence            5799999999999999999998 899999999999972                                          


Q ss_pred             ---------------hchHHHHHHHHHHHHHhcCCCCCCchHHHHhhcChhHHhcC
Q psy17172         40 ---------------HLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE   80 (80)
Q Consensus        40 ---------------~l~~~~~~a~l~aal~HDv~HpG~~N~fl~~t~~~LA~lYn   80 (80)
                                     .++++|++|+++||+|||+||||+||.|++++++|||++||
T Consensus       137 k~~~~~~~~~g~l~~~l~~lE~lAlliAAl~HDvdHpG~nN~Flv~t~spLA~lYn  192 (420)
T 1so2_A          137 KSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYN  192 (420)
T ss_dssp             TTCCCSSTTEECGGGTSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHTT
T ss_pred             ccccccccccchhhhccCHHHHHHHHHHHHHhcCCCCCCCCchhhhcCChHHHHhC
Confidence                           14589999999999999999999999999999999999997

>3ibj_A CGMP-dependent 3',5'-cyclic phosphodiesterase; PDE2A, GAF-domains, allosteric regulation hydrolase, membrane; 3.02A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=206.62  Aligned_cols=79  Identities=34%  Similarity=0.693  Sum_probs=76.3

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..++++|+ +||||||.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus       416 ~~~~~i~~~~l~~fl~~v~~~y~-~~pyHN~~Ha~dv~q~~~~~~~~~~~~~~~~~~e~~a~~~aa~~HD~~H~G~~N~f  494 (691)
T 3ibj_A          416 INNYKIDCPTLARFCLMVKKGYR-DPPYHNWMHAFSVSHFCYLLYKNLELTNYLEDIEIFALFISCMCHDLDHRGTNNSF  494 (691)
T ss_dssp             TTTTTCCHHHHHHHHHHHHHTSB-CCSSSBHHHHHHHHHHHHHHHHHHTGGGTSCHHHHHHHHHHHHHTTTTCCCCCCSC
T ss_pred             hHhcCCCHHHHHHHHHHHHhcCC-CCCCcCcHHHHHHHHHHHHHHhccchhhhCCHHHHHHHHHHHHHccCCCCCCCcHH
Confidence            47899999999999999999998 89999999999998             57899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       495 ~~~~~~~la~~y~  507 (691)
T 3ibj_A          495 QVASKSVLAALYS  507 (691)
T ss_dssp             SSSSSCCGGGTTT
T ss_pred             HHHhCChHHHHcC
Confidence            9999999999997

>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation, glutamine switch, hydrolase-hydrolase inhibitor CO; HET: PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*

Probab=99.97  E-value=4e-31  Score=202.27  Aligned_cols=79  Identities=29%  Similarity=0.602  Sum_probs=75.8

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+||.++|.+|+..|+++|+ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus       225 ~~~f~I~~~~L~rFL~~Ve~~Y~-~nPYHN~~HA~DV~Q~~~~ll~~~~l~~~ls~lE~lAlliAAl~HDvdHPG~nN~F  303 (533)
T 3qi3_A          225 VRDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTY  303 (533)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHHTTGGGTSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             hhhcCCCHHHHHHHHHHHHHccC-CCCCcChHHHhHHHHHHHHHHHhccchhhccHHHHHHHHHHHHHhccCCCCCCCHH
Confidence            36899999999999999999998 99999999999998             46899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       304 li~t~spLAilYn  316 (533)
T 3qi3_A          304 QINARTELAVRYN  316 (533)
T ss_dssp             HHHTTCHHHHHTT
T ss_pred             HHhcCcHHHHHcC
Confidence            9999999999997

>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite, phosphodiesterases,, hydrolase; 2.00A {Trypanosoma cruzi} PDB: 3v94_A*

Probab=99.97  E-value=5e-31  Score=193.22  Aligned_cols=77  Identities=36%  Similarity=0.578  Sum_probs=72.5

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh--------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK--------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~--------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      ++| ++.++|.+|+..|+++|+ +|||||+.||+||+              ..++++|++|+++||+|||+||||+||.|
T Consensus        74 ~~~-~~~~~L~~fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~~~~l~~le~~alliAAl~HDvdHpG~nN~f  151 (345)
T 3v93_A           74 ASQ-EEAQKWAFLVAAVENNYR-PNPYHNAIHAADVLQGTFSLVSAAKPLMEHLTPLECKAAAFAALTHDVCHPGRTNAF  151 (345)
T ss_dssp             SSH-HHHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             hhh-CCHHHHHHHHHHHHHhCC-CCCCcChHHHHHHHHHHHHHHHhchHhhhcCCHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence            345 788999999999999996 99999999999998              35899999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       152 li~t~s~LA~lYn  164 (345)
T 3v93_A          152 LAAVQDPVSFKFS  164 (345)
T ss_dssp             HHHTTCHHHHHSC
T ss_pred             HHHccchHHHhcC
Confidence            9999999999997

>3bjc_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5, erectIle dysfunction, inhibitor design, allosteric enzyme, alternative splicing, CGMP binding; HET: WAN; 2.00A {Homo sapiens} SCOP: a.211.1.2 PDB: 3mf0_A 3lfv_A 2xss_A 2k31_A*

Probab=99.96  E-value=8.3e-30  Score=201.14  Aligned_cols=79  Identities=35%  Similarity=0.580  Sum_probs=75.6

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..|+++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus       589 ~~f~i~~~~l~~fl~~v~~~Y~~~~pyHN~~Ha~dV~q~~~~~l~~~~~~~~~~~~e~~a~~~aa~~HD~~HpG~~N~f~  668 (878)
T 3bjc_A          589 QNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHRGVNNSYI  668 (878)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCCTTCCTG
T ss_pred             hhcCCCHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHccCCCCCCCCHHH
Confidence            5799999999999999999998679999999999998             478999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++|+
T Consensus       669 ~~~~~~la~~y~  680 (878)
T 3bjc_A          669 QRSEHPLAQLYC  680 (878)
T ss_dssp             GGSSCTTHHHHC
T ss_pred             HhcCCHHHHHcC
Confidence            999999999994

>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1

Probab=95.53  E-value=0.015  Score=39.35  Aligned_cols=45  Identities=11%  Similarity=0.143  Sum_probs=32.2

Q ss_pred             HHhhCCCCCCCCChhhhhhhhhhchHH-------HHHHHHHHHHHhcCCCCC
Q psy17172         18 IEEGYHGTNPYHNSIHATDIKRHLTHL-------EIMASLLAAVAHDLDHPG   62 (80)
Q Consensus        18 i~~~Y~~~~pyHN~~Ha~dv~~~l~~~-------~~~a~l~aal~HDv~HpG   62 (80)
                      ++.......+||++.|...|......+       +...+.+||+.||++-+-
T Consensus        14 v~~~~~~~~~~H~~~H~~rV~~~a~~i~a~~~~~d~~~l~lAAlLHDigk~~   65 (225)
T 2qgs_A           14 MKSFHQHDTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSK   65 (225)
T ss_dssp             HHHHTTTCSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCS
T ss_pred             HHHHHhcCCCccCHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHcCCCCC
Confidence            333333356999999999998443222       456889999999999763

>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1

Probab=95.48  E-value=0.016  Score=39.66  Aligned_cols=53  Identities=13%  Similarity=0.165  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCCCC
Q psy17172         10 RVWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDHPG   62 (80)
Q Consensus        10 ~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~HpG   62 (80)
                      .+.+.-.-+++.+..+-|.|++.|...|..   .+   ...+...+.+||+.||+|-+.
T Consensus         6 ~i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AalLHDig~~k   64 (223)
T 3dto_A            6 ILQSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDK   64 (223)
T ss_dssp             HHHHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC--
T ss_pred             HHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccccc
Confidence            344444555666655678999999999982   11   123566789999999999653

>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*

Probab=95.46  E-value=0.0065  Score=46.25  Aligned_cols=26  Identities=31%  Similarity=0.424  Sum_probs=19.2

Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172         42 THLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        42 ~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      ++.+..++.+|||+||+|||=.+=.+
T Consensus       120 ~~~~~~~v~~AaLlHDIGH~PFsH~~  145 (480)
T 3irh_A          120 NDDERLITLCAALLHDVGHGPYSHTF  145 (480)
T ss_dssp             CGGGHHHHHHHHHHTTTTCCTTHHHH
T ss_pred             CHHHHHHHHHHHHHhccCCCCccchh
Confidence            34455678899999999999554443

>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1

Probab=95.40  E-value=0.0092  Score=40.60  Aligned_cols=56  Identities=16%  Similarity=0.145  Sum_probs=36.3

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhhhh---ch---HHHHHHHHHHHHHhcCCCC
Q psy17172          6 LDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKRH---LT---HLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus         6 i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~~---l~---~~~~~a~l~aal~HDv~Hp   61 (80)
                      ++...+......++..+..+-++|++.|...|...   +.   ..+...+.+||+.||+|-+
T Consensus         7 ~~~~~i~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~ll~lAAlLHDigk~   68 (231)
T 2pjq_A            7 ITETQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDD   68 (231)
T ss_dssp             CCHHHHHHHHHHHHTSSTTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC-
T ss_pred             cCHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCcc
Confidence            44444444444444444336689999999999822   21   1345678999999999864

>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1

Probab=95.39  E-value=0.013  Score=39.17  Aligned_cols=51  Identities=14%  Similarity=0.079  Sum_probs=29.6

Q ss_pred             HHHHHHHHHhhCC-CCCCCCChhhhhhhhh---hch---HHHHHHHHHHHHHhcCCCC
Q psy17172         11 VWKLFSLIEEGYH-GTNPYHNSIHATDIKR---HLT---HLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus        11 l~~fl~~i~~~Y~-~~~pyHN~~Ha~dv~~---~l~---~~~~~a~l~aal~HDv~Hp   61 (80)
                      +...+...-..|. .+-++|++.|...|..   .+.   ..+...+.+||+.||+|..
T Consensus         6 li~~~~~~v~~~~~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~v~~AAlLHDig~~   63 (209)
T 3b57_A            6 IILSAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDI   63 (209)
T ss_dssp             HHHHHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-
T ss_pred             HHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCcc
Confidence            3333333333343 3568999999999982   221   2345688999999999754

>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1

Probab=94.88  E-value=0.012  Score=40.16  Aligned_cols=53  Identities=15%  Similarity=0.189  Sum_probs=35.7

Q ss_pred             HHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCCCCC
Q psy17172         11 VWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDHPGV   63 (80)
Q Consensus        11 l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~HpG~   63 (80)
                      +.+.-.-+++.+..+-|.|++.|...|..   .+   ...+...+.+||+.||+|.+..
T Consensus         7 i~~~~~~v~~~l~~~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~l~~AAlLHDig~~k~   65 (223)
T 3djb_A            7 IEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKL   65 (223)
T ss_dssp             HHHHHHHHHHHTTSSSCTTTHHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC--C
T ss_pred             HHHHHHHHHHHhhcCCCcCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccccc
Confidence            34444445555655668999999999982   11   1245678899999999987543

>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1

Probab=94.77  E-value=0.032  Score=37.21  Aligned_cols=43  Identities=19%  Similarity=0.330  Sum_probs=30.0

Q ss_pred             HHhhCCCCCCCCChhhhhhhhh---hch---HHHHHHHHHHHHHhcCCC
Q psy17172         18 IEEGYHGTNPYHNSIHATDIKR---HLT---HLEIMASLLAAVAHDLDH   60 (80)
Q Consensus        18 i~~~Y~~~~pyHN~~Ha~dv~~---~l~---~~~~~a~l~aal~HDv~H   60 (80)
                      +++.+....++|.+.|...|..   .+.   ..+...+.+||+.||+|-
T Consensus        22 v~~~~~~~~~~h~~~H~~rV~~~a~~la~~~~~d~~~l~~AaLLHDIg~   70 (220)
T 2pq7_A           22 REAFKDYDDPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKR   70 (220)
T ss_dssp             HHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTH
T ss_pred             HHHHHhcCCCchhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCC
Confidence            3444433679999999999982   111   134567899999999954

>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}

Probab=94.67  E-value=0.032  Score=42.92  Aligned_cols=41  Identities=22%  Similarity=0.384  Sum_probs=30.0

Q ss_pred             CCC-hhhhhhhhh----------------hchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172         28 YHN-SIHATDIKR----------------HLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        28 yHN-~~Ha~dv~~----------------~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      .|+ +.|+..|+.                .++..+..++.+|||+||+|||=.+=.+.
T Consensus        63 ~hTRf~HSLgV~~la~~i~~~l~~~~~~~~~~~~d~~~v~~AaLlHDiGH~PFsH~~E  120 (528)
T 3u1n_A           63 SHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFD  120 (528)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTTTCBTTBHHHH
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHhhCcccCCCHHHHHHHHHHHHHhccCCCCccchhh
Confidence            466 578888871                13456667889999999999997666554

>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}

Probab=94.47  E-value=0.028  Score=41.79  Aligned_cols=27  Identities=22%  Similarity=0.240  Sum_probs=20.6

Q ss_pred             chHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172         41 LTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        41 l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++.+.-.+.+|||+||+|||=.+=.+
T Consensus        81 ~~~~d~~~~~~AaLlHDiGh~PfsH~~  107 (410)
T 2q14_A           81 IFDSEAEAVQAAILLHDIGHGPFSHVL  107 (410)
T ss_dssp             CCHHHHHHHHHHHHHTTTTCCTTHHHH
T ss_pred             CCHHHHHHHHHHHHHhccCCCcccccc
Confidence            455667789999999999998555433

>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}

Probab=92.73  E-value=0.07  Score=40.14  Aligned_cols=21  Identities=24%  Similarity=0.278  Sum_probs=16.4

Q ss_pred             HHHHHHHHhcCCCCCCchHHH
Q psy17172         48 ASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        48 a~l~aal~HDv~HpG~~N~fl   68 (80)
                      .+-.|||+||+|||=++=.+.
T Consensus       101 ~v~~a~L~HDiGH~PFgH~gE  121 (451)
T 2pgs_A          101 VVQSACLAHDIGNPPFGHSGE  121 (451)
T ss_dssp             HHHHHHHHTTTTCCTTHHHHH
T ss_pred             HHHHHHHhhccCCCCccccHH
Confidence            677899999999996554433

>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}

Probab=92.26  E-value=0.016  Score=40.13  Aligned_cols=36  Identities=17%  Similarity=0.263  Sum_probs=22.7

Q ss_pred             CCCCCChhhhhhhhhhc------hHHHHHHHHHHHHHhcCCC
Q psy17172         25 TNPYHNSIHATDIKRHL------THLEIMASLLAAVAHDLDH   60 (80)
Q Consensus        25 ~~pyHN~~Ha~dv~~~l------~~~~~~a~l~aal~HDv~H   60 (80)
                      .-++|++.|...|....      ...+...+.+||+.||++-
T Consensus        21 ~~~~H~~~H~~rV~~~a~~ia~~~~~d~~~~~~AalLHDig~   62 (239)
T 3gw7_A           21 QDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVS   62 (239)
T ss_dssp             ------CCHHHHHHHHHHHHTTTSCSCTTHHHHHHHHTTTTC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhccc
Confidence            57899999999998321      1234567899999999975

>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}

Probab=92.18  E-value=0.09  Score=39.48  Aligned_cols=21  Identities=29%  Similarity=0.347  Sum_probs=16.5

Q ss_pred             HHHHHHHHHhcCCCCCCchHH
Q psy17172         47 MASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        47 ~a~l~aal~HDv~HpG~~N~f   67 (80)
                      -.+-.|||+||+|||=++=.+
T Consensus       107 ~lv~~a~L~HDiGH~PFgH~g  127 (444)
T 3bg2_A          107 AIVAAAALAHDIGNPPFGHSG  127 (444)
T ss_dssp             HHHHHHHHHTTTTCCTTHHHH
T ss_pred             HHHHHHHHhcccCCCCccccH
Confidence            477899999999999655443

>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1

Probab=91.08  E-value=0.15  Score=37.23  Aligned_cols=40  Identities=20%  Similarity=0.237  Sum_probs=27.7

Q ss_pred             CCCCChhhhhhhhh---------hchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172         26 NPYHNSIHATDIKR---------HLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus        26 ~pyHN~~Ha~dv~~---------~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      .+-+-|.|...|+.         .+++.  ..+.+||++||+||.=.+-.+
T Consensus        47 a~~~r~~Hsl~V~~~a~~ia~~~~~~~~--~~~~~AaLLHDiG~~pfsh~~   95 (371)
T 2hek_A           47 AQHTRFEHSLGVYHITERICESLKVKEK--ELVKLAGLLHDLGHPPFSHTT   95 (371)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHTCTTH--HHHHHHHHTTTTTCCSSSSCH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHhcCccccccch
Confidence            34677899988881         12221  578899999999997554444

>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}

Probab=86.87  E-value=1.2  Score=28.83  Aligned_cols=52  Identities=8%  Similarity=0.014  Sum_probs=34.1

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          7 DVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         7 ~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      +.+++..++...-+.       +.+.|+..|+         ..+++.   .+.+||+.||+|.......++
T Consensus         4 ~~~~~~~~l~~~~~~-------~~~~Hs~~Va~~A~~lA~~~g~d~~---~~~~AgLLHDiGk~~~~~~il   64 (190)
T 3ccg_A            4 SYDKITDYLMNNLGE-------KRYKHSLGVMDTAVRLAGIYNEDTE---KARIAGLVHDCAKKLPGEKII   64 (190)
T ss_dssp             CHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTSCHHHHH
T ss_pred             CHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHhcCCCCHHHHH
Confidence            345555665554443       3788999988         123332   378999999999987655444

>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}

Probab=86.18  E-value=0.34  Score=35.60  Aligned_cols=30  Identities=27%  Similarity=0.386  Sum_probs=20.4

Q ss_pred             hhhhhhhh-------hchHHHHHHHHHHHHHhcCCCCC
Q psy17172         32 IHATDIKR-------HLTHLEIMASLLAAVAHDLDHPG   62 (80)
Q Consensus        32 ~Ha~dv~~-------~l~~~~~~a~l~aal~HDv~HpG   62 (80)
                      .|...|+.       .+.- +.-.+-.|||+||+|||=
T Consensus        78 ~HSl~Va~iar~ia~~l~l-~~~l~~~a~LlHDiGh~P  114 (376)
T 2dqb_A           78 THTLEVAQVSRSIARALGL-NEDLTEAIALSHDLGHPP  114 (376)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHTTTTCCS
T ss_pred             HHHHHHHHHHHHHHHHcCC-CHHHHHHHHHHHhcCCCc
Confidence            78888882       1210 112567899999999993

>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}

Probab=82.88  E-value=1.3  Score=28.65  Aligned_cols=37  Identities=19%  Similarity=0.152  Sum_probs=26.9

Q ss_pred             CChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172         29 HNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        29 HN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      +.+.|+..|+         ..+++.   .+.+||+.||+|.......++
T Consensus        18 ~~~~Hs~~Va~~A~~lA~~~g~~~~---~~~~agLLHDIGk~~~~~~il   63 (188)
T 2o08_A           18 HRYQHTIGVMETAIDLAKLYGADQQ---KAELAAIFHDYAKFRDKNEMR   63 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHHcCCCCHHHHH
Confidence            5899999988         123333   378999999999987655544

>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}

Probab=82.22  E-value=1.4  Score=28.71  Aligned_cols=37  Identities=22%  Similarity=0.214  Sum_probs=27.0

Q ss_pred             CChhhhhhhh---------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172         29 HNSIHATDIK---------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        29 HN~~Ha~dv~---------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      +.+.|+..|+         ..+++.   .+.+||+.||+|.......++
T Consensus        26 ~~~~Hs~~Va~~A~~lA~~~g~d~~---~~~~AgLLHDIGK~~~~~~il   71 (196)
T 2ogi_A           26 KRFNHVLGVERAAIELAERYGYDKE---KAGLAALLHDYAKELSDDEFL   71 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCHH---HHHHHHHHTTTTTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCHH---HHHHHHHHHHcCCcCCHHHHH
Confidence            4889999988         123332   378999999999987665544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	80
d1tbfa_	326	a.211.1.2 (A:) cGMP-specific 3',5'-cyclic phosphod	3e-19
d1y2ka1	326	a.211.1.2 (A:86-411) Catalytic domain of cyclic nu	2e-16
d3dy8a1	324	a.211.1.2 (A:182-505) High-affinity cGMP-specific	4e-16
d1taza_	357	a.211.1.2 (A:) Catalytic domain of cyclic nucleoti	2e-15
d1so2a_	415	a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phospho	1e-10
d1so2a_	415	a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phospho	5e-06

>d1tbfa_ a.211.1.2 (A:) cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx {Human (Homo sapiens) [TaxId: 9606]} Length = 326

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 3e-19
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +++F +    + +    +++ Y     YHN  HA +             I+  LT LEI+
Sbjct: 52  VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEIL 111

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A L+AA++HDLDHPGV+  FLI T++ LA +Y
Sbjct: 112 ALLIAALSHDLDHPGVSNQFLINTNSELALMY 143

>d1y2ka1 a.211.1.2 (A:86-411) Catalytic domain of cyclic nucleotide phosphodiesterase pde4d {Human (Homo sapiens) [TaxId: 9606]} Length = 326

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: Catalytic domain of cyclic nucleotide phosphodiesterase pde4d
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-16
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 13/92 (14%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           ++ F + V  +      +E+ YH    YHN+IHA D             ++   T LEI+
Sbjct: 47  LKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEIL 106

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           A++ A+  HD+DHPGV+  FLI T++ LA +Y
Sbjct: 107 AAIFASAIHDVDHPGVSNQFLINTNSELALMY 138

>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo sapiens) [TaxId: 9606]} Length = 324

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 4e-16
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD-------------IKRHLTHLEIM 47
           +  F+++ V + +    + + Y   NP+HN  H                ++   +  +I+
Sbjct: 44  VRDFSINPVTLRRWLFCVHDNYRN-NPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDIL 102

Query: 48  ASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
             + AA+ HDLDHPG N  + I     LA  Y
Sbjct: 103 ILMTAAICHDLDHPGYNNTYQINARTELAVRY 134

>d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]} Length = 357

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 2e-15
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 14/93 (15%)

Query: 1   MEHFNLDVVRVWKLFSLIEEGYH-GTNPYHNSIHATDI-------------KRHLTHLEI 46
           +  F +  V +      +E GY    NPYHN IHA D+                L+ +E+
Sbjct: 49  ISRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIEL 108

Query: 47  MASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
           +A + AA  HD +H G    F I T +  A +Y
Sbjct: 109 LAIIFAAAIHDYEHTGTTNSFHIQTKSECAIVY 141

>d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} Length = 415

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 1e-10
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 23  HGTNPYHNSIHATDIKRHLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALY 79
              +  +       +  ++  LE+MA  +AA  HD DHPG    FL+AT+   A LY
Sbjct: 130 SSKSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLY 186

>d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]} Length = 415

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 5e-06
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 1  MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATD 36
          +E F +   +    F  +E GY    PYHN IHATD
Sbjct: 52 LEIFKIPTQQFMNYFRALENGYRD-IPYHNRIHATD 86

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	80
d1tbfa_	326	cGMP-specific 3',5'-cyclic phosphodiesterase pde5a	99.98
d1y2ka1	326	Catalytic domain of cyclic nucleotide phosphodiest	99.97
d1so2a_	415	cGMP-inhibited 3',5'-cyclic phosphodiesterase B, p	99.97
d1taza_	357	Catalytic domain of cyclic nucleotide phosphodiest	99.97
d3dy8a1	324	High-affinity cGMP-specific 3',5'-cyclic phosphodi	99.97
d3dtoa1	212	Uncharacterized protein BH2835 {Bacillus haloduran	97.04
d2pq7a1	217	Predicted hydrolase mes0020 {Uncultured thermotoga	96.48
d2o6ia1	453	Hypothetical protein EF1143 {Enterococcus faecalis	96.4
d2heka1	369	Hypothetical protein aq_1910 {Aquifex aeolicus [Ta	96.33
d3djba1	213	Uncharacterized protein BT9727_1981 {Bacillus thur	96.04
d3b57a1	201	Uncharacterized protein Lin1889 {Listeria innocua	95.93
d2pjqa1	215	Uncharacterized protein LP2664 {Lactobacillus plan	95.74
d2qgsa1	216	Uncharacterized protein SE1688 {Staphylococcus epi	92.9

>d1tbfa_ a.211.1.2 (A:) cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4e-33  Score=200.47  Aligned_cols=80  Identities=39%  Similarity=0.658  Sum_probs=76.5

Q ss_pred             CcccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          1 MEHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         1 ~~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      +++|+|+.+++.+|+..|+++|+++||||||.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        52 ~~~~~i~~~~l~~Fl~~v~~~Y~~~~pyHN~~HA~dV~q~~~~~l~~~~l~~~l~~~e~~alliAal~HDv~HpG~~N~f  131 (326)
T d1tbfa_          52 VQNFQMKHEVLCRWILSVKKNYRKNVAYHNWRHAFNTAQCMFAALKAGKIQNKLTDLEILALLIAALSHDLDHPGVSNQF  131 (326)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHTSCTTSSSSSHHHHHHHHHHHHHHHHTTCCGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             hhhcCCCHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHhcCCCCccCCHHHHHHHHHHHHHhccCCCCcchHH
Confidence            36799999999999999999998679999999999999             57999999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       132 lv~~~s~la~~yn  144 (326)
T d1tbfa_         132 LINTNSELALMYN  144 (326)
T ss_dssp             HHHTTCHHHHHTT
T ss_pred             HHhcCCHHHHHhC
Confidence            9999999999997

>d1y2ka1 a.211.1.2 (A:86-411) Catalytic domain of cyclic nucleotide phosphodiesterase pde4d {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: Catalytic domain of cyclic nucleotide phosphodiesterase pde4d
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-32  Score=196.20  Aligned_cols=79  Identities=41%  Similarity=0.735  Sum_probs=76.0

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+||.++|.+|+..++++|+++|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        48 ~~~~i~~~~l~~Fl~~v~~~Y~~~~pyHN~~HA~dV~q~~~~ll~~~~l~~~l~~~e~~alliAal~HDv~HpG~~N~fl  127 (326)
T d1y2ka1          48 KTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFL  127 (326)
T ss_dssp             HHTTCCHHHHHHHHHHHHHTSCTTCSSSSHHHHHHHHHHHHHHHTCGGGTTTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHhccchhhhCCHHHHHHHHHHHHHhccCCCCCCchHH
Confidence            5799999999999999999998679999999999998             578999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       128 ~~~~~~la~~y~  139 (326)
T d1y2ka1         128 INTNSELALMYN  139 (326)
T ss_dssp             HHTTCHHHHHHT
T ss_pred             HhcCCHHHHHcC
Confidence            999999999997

>d1so2a_ a.211.1.2 (A:) cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: cGMP-inhibited 3',5'-cyclic phosphodiesterase B, pde3b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-32  Score=201.79  Aligned_cols=78  Identities=44%  Similarity=0.744  Sum_probs=74.2

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhhh------------------------------------------
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR------------------------------------------   39 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~------------------------------------------   39 (80)
                      ++|+||.++|.+|+..|+++|+ +|||||+.||+||++                                          
T Consensus        53 ~~f~i~~~~l~~Fl~~v~~~Y~-~nPYHN~~HA~dV~q~~~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (415)
T d1so2a_          53 EIFKIPTQQFMNYFRALENGYR-DIPYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDGRINHGRIAYISS  131 (415)
T ss_dssp             HHTTCCHHHHHHHHHHHHTTSC-SCSSSSHHHHHHHHHHHHHHTTSCEETCCCCCCC---------------CCCCCCCC
T ss_pred             HhcCCCHHHHHHHHHHHHHhCC-CCCCcCHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999998 899999999999981                                          


Q ss_pred             ---------------hchHHHHHHHHHHHHHhcCCCCCCchHHHHhhcChhHHhcC
Q psy17172         40 ---------------HLTHLEIMASLLAAVAHDLDHPGVNQPFLIATSNHLAALYE   80 (80)
Q Consensus        40 ---------------~l~~~~~~a~l~aal~HDv~HpG~~N~fl~~t~~~LA~lYn   80 (80)
                                     .++++|++|+++||+|||+||||+||.|++++++|||++||
T Consensus       132 ~~~~~~~~~~~~l~~~l~~lE~~alliAAl~HDvdHpG~nN~Flv~t~~pLA~lYn  187 (415)
T d1so2a_         132 KSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAVLYN  187 (415)
T ss_dssp             TTCCCSSTTEECGGGTSCHHHHHHHHHHHHHTTTTCCSCCHHHHHHTTCHHHHHTT
T ss_pred             cccccccccchhhhhhCCHHHHHHHHHHHHHhccCCCCccHHHHHHcCCHHHHHhC
Confidence                           26899999999999999999999999999999999999997

>d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: Catalytic domain of cyclic nucleotide phosphodiesterase 1b, PDE1B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-32  Score=198.68  Aligned_cols=79  Identities=35%  Similarity=0.681  Sum_probs=75.8

Q ss_pred             cccccCHHHHHHHHHHHHhhCCC-CCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHG-TNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPF   67 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~-~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~f   67 (80)
                      ++|+||.++|.+|+..|+++|+. +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|
T Consensus        50 ~~f~i~~~~l~~Fl~~v~~~Y~~~~nPYHN~~HA~dV~q~~~~lL~~~~~~~~l~~~E~~alliAal~HD~~HpG~~N~f  129 (357)
T d1taza_          50 SRFKIPTVFLMSFLDALETGYGKYKNPYHNQIHAADVTQTVHCFLLRTGMVHCLSEIELLAIIFAAAIHDYEHTGTTNSF  129 (357)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHTTTCCSSSSHHHHHHHHHHHHHHHHHHSGGGGSCHHHHHHHHHHHHHTTTTCCSSCHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHhcCCCCcchHH
Confidence            67999999999999999999985 68999999999998             57999999999999999999999999999


Q ss_pred             HHhhcChhHHhcC
Q psy17172         68 LIATSNHLAALYE   80 (80)
Q Consensus        68 l~~t~~~LA~lYn   80 (80)
                      ++++++|||++||
T Consensus       130 lv~s~~~LA~lYn  142 (357)
T d1taza_         130 HIQTKSECAIVYN  142 (357)
T ss_dssp             HHHHTCHHHHHHT
T ss_pred             HHhcCCHHHHhcC
Confidence            9999999999997

>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: PDEase
domain: High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.3e-32  Score=195.05  Aligned_cols=78  Identities=29%  Similarity=0.603  Sum_probs=75.4

Q ss_pred             cccccCHHHHHHHHHHHHhhCCCCCCCCChhhhhhhh-------------hhchHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172          2 EHFNLDVVRVWKLFSLIEEGYHGTNPYHNSIHATDIK-------------RHLTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus         2 ~~f~i~~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~-------------~~l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      ++|+|+.+++.+|+..++++|+ +|||||+.||+||+             ..++++|++|+++||+|||+||||+||.|+
T Consensus        45 ~~~~i~~~~l~~Fl~~v~~~Y~-~npYHN~~HA~dV~q~~~~ll~~~~~~~~l~~~e~~alliAal~HD~~HpG~~N~fl  123 (324)
T d3dy8a1          45 RDFSINPVTLRRWLFCVHDNYR-NNPFHNFRHCFCVAQMMYSMVWLCSLQEKFSQTDILILMTAAICHDLDHPGYNNTYQ  123 (324)
T ss_dssp             HHHTCCHHHHHHHHHHHHHTSC-CCSSSSHHHHHHHHHHHHHHHHHTTGGGTSCHHHHHHHHHHHHHTTTTCCSSCHHHH
T ss_pred             HhcCCCHHHHHHHHHHHHHcCC-CCCCcCHHHHHHHHHHHHHHHHhcccccccChHHHHHHHHHHHHHccCCCCCChHHH
Confidence            6799999999999999999998 89999999999999             478999999999999999999999999999


Q ss_pred             HhhcChhHHhcC
Q psy17172         69 IATSNHLAALYE   80 (80)
Q Consensus        69 ~~t~~~LA~lYn   80 (80)
                      +++++|||++||
T Consensus       124 ~~~~~~la~~yn  135 (324)
T d3dy8a1         124 INARTELAVRYN  135 (324)
T ss_dssp             HHHTCHHHHHTT
T ss_pred             HhcCCHHHHHcC
Confidence            999999999997

>d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835 {Bacillus halodurans [TaxId: 86665]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein BH2835
species: Bacillus halodurans [TaxId: 86665]

Probab=97.04  E-value=0.00031  Score=45.90  Aligned_cols=52  Identities=13%  Similarity=0.156  Sum_probs=31.4

Q ss_pred             HHHHHHHHhhCCCCCCCCChhhhhhhhh---h---chHHHHHHHHHHHHHhcCCCCCC
Q psy17172         12 WKLFSLIEEGYHGTNPYHNSIHATDIKR---H---LTHLEIMASLLAAVAHDLDHPGV   63 (80)
Q Consensus        12 ~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~---l~~~~~~a~l~aal~HDv~HpG~   63 (80)
                      .+.-.-+++.+.++-|+|++.|...|..   .   -.+.+...+.+||+.||++..+.
T Consensus         7 ~~~~~~v~~~~~~~~~~H~~~H~~rV~~~A~~Ia~~e~~D~~vv~~aAllHDig~~~~   64 (212)
T d3dtoa1           7 QSAEAWVKKQLMDEYSGHDWYHIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDKL   64 (212)
T ss_dssp             HHHHHHHHHTTTTC----CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSTTC---
T ss_pred             HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcccccccc
Confidence            3333444555555678999999999982   1   12345678999999999986543

>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured thermotogales bacterium [TaxId: 221214]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Predicted hydrolase mes0020
species: Uncultured thermotogales bacterium [TaxId: 221214]

Probab=96.48  E-value=0.0014  Score=42.88  Aligned_cols=52  Identities=17%  Similarity=0.395  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCCCCChhhhhhhhh------hchHHHHHHHHHHHHHhcCCCC
Q psy17172          8 VVRVWKLFSLIEEGYHGTNPYHNSIHATDIKR------HLTHLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus         8 ~~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~------~l~~~~~~a~l~aal~HDv~Hp   61 (80)
                      ..++..|+.+.-+.|.  .|=|++.|...|..      .-.+.+...+.+||+.||+|.+
T Consensus        13 ~~~i~~~v~~~~~~~~--d~sHd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AALLHDIg~~   70 (217)
T d2pq7a1          13 LREILNIVREAFKDYD--DPAHDISHTFRVMENASEIASREKCDLQKAIIAALLHDIKRP   70 (217)
T ss_dssp             HHHHHHHHHHHHTTCC--CTTTSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHTTTTHH
T ss_pred             HHHHHHHHHHHHhhCC--CCCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhhcch
Confidence            3567777777777774  68899999999981      1122355678889999999854

>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Hypothetical protein EF1143
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.40  E-value=0.00081  Score=48.34  Aligned_cols=28  Identities=29%  Similarity=0.352  Sum_probs=23.3

Q ss_pred             chHHHHHHHHHHHHHhcCCCCCCchHHH
Q psy17172         41 LTHLEIMASLLAAVAHDLDHPGVNQPFL   68 (80)
Q Consensus        41 l~~~~~~a~l~aal~HDv~HpG~~N~fl   68 (80)
                      +++.+..++.+||||||+||+=.+=.|.
T Consensus        95 ~~~~~~~~v~~AaLlHDiGHgPfSH~~E  122 (453)
T d2o6ia1          95 WNDDERLITLCAALLHDVGHGPYSHTFE  122 (453)
T ss_dssp             BCGGGHHHHHHHHHHTTTTCCTTHHHHH
T ss_pred             CCHHHHHHHHHHHHHhccCccccccccc
Confidence            4566778999999999999998777665

>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Hypothetical protein aq 1910
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.33  E-value=0.00053  Score=46.58  Aligned_cols=37  Identities=30%  Similarity=0.336  Sum_probs=24.7

Q ss_pred             CCC-hhhhhhhhh-------hchHHHHHHHHHHHHHhcCCCCCCc
Q psy17172         28 YHN-SIHATDIKR-------HLTHLEIMASLLAAVAHDLDHPGVN   64 (80)
Q Consensus        28 yHN-~~Ha~dv~~-------~l~~~~~~a~l~aal~HDv~HpG~~   64 (80)
                      .|+ ++|...|+.       .+..-+.-.+-+|||+||+|||=.+
T Consensus        48 ~htR~~HSLgV~~lar~l~~~l~~~~~~~v~~A~LlHDiGh~PFs   92 (369)
T d2heka1          48 QHTRFEHSLGVYHITERICESLKVKEKELVKLAGLLHDLGHPPFS   92 (369)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHTTTTTCCSSS
T ss_pred             ccccchHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhhcccchhh
Confidence            455 378888872       2222233467889999999999444

>d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981 {Bacillus thuringiensis [TaxId: 1428]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein BT9727 1981
species: Bacillus thuringiensis [TaxId: 1428]

Probab=96.04  E-value=0.0013  Score=43.18  Aligned_cols=53  Identities=13%  Similarity=0.158  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCChhhhhhhhh------hchHHHHHHHHHHHHHhcCCCC
Q psy17172          9 VRVWKLFSLIEEGYHGTNPYHNSIHATDIKR------HLTHLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus         9 ~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~------~l~~~~~~a~l~aal~HDv~Hp   61 (80)
                      +.+.+...-|++.+..+.|.|++.|...|..      .-.+.+...+.+||+.||++.+
T Consensus         4 e~i~~~~~~vk~~~~~~~~~Hd~~Hi~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDig~~   62 (213)
T d3djba1           4 EKIEKTITFVKHILEKDASGHDWYHIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADE   62 (213)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTTHHHHHHHHHHHHHHHTTTCSCHHHHHHHHTTHHHHC-
T ss_pred             HHHHHHHHHHHHHHhcCCCcCChHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcccc
Confidence            3444544555555555678899999999981      1123466789999999999754

>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein Lin1889
species: Listeria innocua [TaxId: 1642]

Probab=95.93  E-value=0.0028  Score=40.67  Aligned_cols=51  Identities=14%  Similarity=0.201  Sum_probs=30.4

Q ss_pred             HHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCCC
Q psy17172         11 VWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDHP   61 (80)
Q Consensus        11 l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~Hp   61 (80)
                      +.+...-+++.+..+-|.|++.|...|..   .+   .+.+...+.+||+.||++-.
T Consensus         7 i~~~~~~v~~~~~~~~~~Hd~~H~~rV~~~A~~Ia~~e~~d~~~v~~AAlLHDi~~~   63 (201)
T d3b57a1           7 ILSAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDI   63 (201)
T ss_dssp             HHHHHHHHHTTC------CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-
T ss_pred             HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHhhcccc
Confidence            33444445555544568999999999982   11   22345689999999999854

>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein LP2664
species: Lactobacillus plantarum [TaxId: 1590]

Probab=95.74  E-value=0.0028  Score=41.43  Aligned_cols=52  Identities=17%  Similarity=0.166  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc---hHHHHHHHHHHHHHhcCCC
Q psy17172          9 VRVWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL---THLEIMASLLAAVAHDLDH   60 (80)
Q Consensus         9 ~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l---~~~~~~a~l~aal~HDv~H   60 (80)
                      ..+.+.-.-+++.+..+-+.|++.|...|..   .+   ...+...+++||+.||++-
T Consensus         5 ~~i~~i~~~~~~~l~~~~~~Hd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDigd   62 (215)
T d2pjqa1           5 TQLTAIQTYALQKLAHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVID   62 (215)
T ss_dssp             HHHHHHHHHHHTSSTTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcc
Confidence            3444444445666666788999999999982   11   2335567889999999963

>d2qgsa1 a.211.1.1 (A:1-216) Uncharacterized protein SE1688 {Staphylococcus epidermidis [TaxId: 1282]}

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein SE1688
species: Staphylococcus epidermidis [TaxId: 1282]

Probab=92.90  E-value=0.036  Score=35.90  Aligned_cols=54  Identities=9%  Similarity=0.194  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHhhCCCCCCCCChhhhhhhhh---hc----hHHHHHHHHHHHHHhcCCCCCCch
Q psy17172          9 VRVWKLFSLIEEGYHGTNPYHNSIHATDIKR---HL----THLEIMASLLAAVAHDLDHPGVNQ   65 (80)
Q Consensus         9 ~~l~~fl~~i~~~Y~~~~pyHN~~Ha~dv~~---~l----~~~~~~a~l~aal~HDv~HpG~~N   65 (80)
                      ++...|+...-++   +-+.|++.|..-|..   .+    ..-+...+.+||+.||++-....+
T Consensus         8 ~~~~~~v~~~~~~---~~~~Hd~~H~~RV~~~A~~Ia~~e~~~d~~vv~~AAlLHDigd~k~~~   68 (216)
T d2qgsa1           8 KKAYEYMKSFHQH---DTTGHDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSKLTD   68 (216)
T ss_dssp             HHHHHHHHHHTTT---CSSCHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCSSSC
T ss_pred             HHHHHHHHHHhcC---CCCCcCHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHhhhccccccc
Confidence            4555565554443   456799999999971   11    111345689999999998665544