Psyllid ID: psy17200

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA
Secondary Structure (PSIPRED)
cccccccccccccEEEcccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccEEEEEEEEEEccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccEEEEccEEEEEHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEccEEEEEEEEEEEEccccEEEEEEEEccccccccccHHcccccccccccccccccccccccccccccccccccEEEEccccEEEccccEEEHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mkhstgtklgenlfktasddhlikdpvKVVEDAVDSWYSEIStyndygnpdtintdtsrfcigHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASnvlkegdwddegppevfcprrtvyphandtqppetyfhdddgniidlegnvyvDTARYYLQRRANGQA
Flexible Loop (DISEMBL)
mkhstgtklgenlfktasddhlikdPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA
Low Complexity Region (SEG)
MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA
Disordered region (IsUnstruct)
*******************DHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHAN*****ETYFHDDDGNIIDLEGNVYVDTARYYLQ*******
Disordered Region (DISOPRED)
MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKE**********************N*TQPPETYFHDDDGNIIDLEGNVYVDTARYYL*R******
Disordered Region (DISEMBL)
MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA
Disordered Region (DISPRO)
*****GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKE********PEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANG**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
A9YME1	232	Venom allergen 5 OS=Micro	N/A	N/A	0.559	0.426	0.288	4e-10
P47032	299	Protein PRY1 OS=Saccharom	yes	N/A	0.395	0.234	0.468	4e-09
P35760	204	Venom allergen 5 OS=Vespu	N/A	N/A	0.491	0.426	0.326	1e-08
P35793	164	Pathogenesis-related prot	N/A	N/A	0.508	0.548	0.396	2e-08
Q05968	164	Pathogenesis-related prot	N/A	N/A	0.508	0.548	0.386	2e-08
P47033	881	Cell wall protein PRY3 OS	no	N/A	0.389	0.078	0.437	3e-08
P81657	202	Venom allergen 5 OS=Vespa	N/A	N/A	0.497	0.435	0.333	3e-08
P36110	329	Protein PRY2 OS=Saccharom	no	N/A	0.401	0.215	0.387	4e-08
P35781	202	Venom allergen 5.01 OS=Ve	N/A	N/A	0.514	0.450	0.320	5e-08
P86870	225	Venom allergen 5 OS=Vespa	N/A	N/A	0.497	0.391	0.323	5e-08

>sp|A9YME1|VA5_MICHY Venom allergen 5 OS=Microctonus hyperodae PE=2 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 61/104 (58%), Gaps = 5/104 (4%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           +++    +G+NL+   S +   ++   ++  +V+SWYSE+  +++     ++      F 
Sbjct: 127 RNTKANSVGQNLYMMGSSEK-SENTHDILTASVNSWYSEVKDFDN----RSVREYKFEFT 181

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
            GH++Q+VW D+ ++G G+ +Y  +G    +V CNY PAGN++G
Sbjct: 182 TGHYSQVVWGDTTHVGCGLVQYKDSGFYTTMVACNYSPAGNLIG 225

Microctonus hyperodae (taxid: 165561)

>sp|P47032|PRY1_YEAST Protein PRY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY1 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 9/79 (11%)

Query: 33  AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYI 92
           AVD+WY+EIS Y D+ NP   +++T     GHFTQ+VW+ +  +G GI      G     
Sbjct: 226 AVDAWYNEISNY-DFSNPG-FSSNT-----GHFTQVVWKSTTQVGCGIK--TCGGAWGDY 276

Query: 93  VVCNYDPAGNVVGLYASNV 111
           V+C+YDPAGN  G YA NV
Sbjct: 277 VICSYDPAGNYEGEYADNV 295

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P35760|VA5_VESMC Venom allergen 5 OS=Vespula maculifrons PE=1 SV=1

 Score = 59.7 bits (143), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 8   KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQ 67
           ++G+N+  T S   +  DPVK+V+     W  E+  YN    P    ++ +   IGH+TQ
Sbjct: 108 QVGQNVALTGSTAAVYNDPVKLVK----MWEDEVKDYN----PKKKFSENNFLKIGHYTQ 159

Query: 68  LVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGN 102
           +VW +++ +G G  +Y+      + +VCNY P+GN
Sbjct: 160 MVWANTKEVGCGSIKYIQENWHKHYLVCNYGPSGN 194

Vespula maculifrons (taxid: 7453)

>sp|P35793|PR13_HORVU Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 16/106 (15%)

Query: 1   MKHSTGTKLGENLF-KTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSR 59
           ++HS G   GEN+F  +A  D           DAV+SW SE   Y DYG+    NT  + 
Sbjct: 70  LQHSGG-PYGENIFWGSAGADWK-------ASDAVNSWVSEKKDY-DYGS----NTCAAG 116

Query: 60  FCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
              GH+TQ+VWR S  +G   +R V N      + CNY+P GN+VG
Sbjct: 117 KVCGHYTQVVWRASTSIG--CARVVCNNNRGVFITCNYEPRGNIVG 160

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 16/106 (15%)

Query: 1   MKHSTGTKLGENLF-KTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSR 59
           ++HS G   GEN+F  +A  D           DAV+SW SE   Y DYG+    NT  + 
Sbjct: 70  LQHSGGP-YGENIFWGSAGADWK-------ASDAVNSWVSEKKDY-DYGS----NTCAAG 116

Query: 60  FCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
              GH+TQ+VWR S  +G   +R V N      + CNY+P GN++G
Sbjct: 117 KVCGHYTQVVWRASTSIG--CARVVCNNNRGVFITCNYEPRGNIIG 160

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P47033|PRY3_YEAST Cell wall protein PRY3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY3 PE=1 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 11/80 (13%)

Query: 33  AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAV-Y 91
           AVD+WY EIS YN Y NP    +       GHFTQ+VW+ +  +G G   Y Y GT    
Sbjct: 89  AVDAWYGEISKYN-YSNPGFSES------TGHFTQVVWKSTAEIGCG---YKYCGTTWNN 138

Query: 92  IVVCNYDPAGNVVGLYASNV 111
            +VC+Y+P GN +G +A  V
Sbjct: 139 YIVCSYNPPGNYLGEFAEEV 158

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P81657|VA5_VESMA Venom allergen 5 OS=Vespa mandarinia PE=1 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 14/102 (13%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           K+S G  + EN    AS           V + V  W  E+  Y  YG+     T      
Sbjct: 106 KYSVGQNIAENGSTAAS--------FASVSNMVQMWADEVKNY-QYGS-----TKNKLIE 151

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNV 103
           +GH+TQ+VW  ++ +G G  +Y+ NG   + +VCNY PAGN+
Sbjct: 152 VGHYTQMVWAKTKEIGCGSIKYIENGWHRHYLVCNYGPAGNI 193

Vespa mandarinia (taxid: 7446)

>sp|P36110|PRY2_YEAST Protein PRY2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRY2 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 9/80 (11%)

Query: 33  AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYI 92
           +VD+WY+EI++Y DY NP    +       GHFTQ+VW+ +  +G G+      G     
Sbjct: 256 SVDAWYNEITSY-DYSNPGFSES------AGHFTQVVWKGTSEVGCGLKSC--GGEWGDY 306

Query: 93  VVCNYDPAGNVVGLYASNVL 112
           ++C+Y  AGNV+G +A NV+
Sbjct: 307 IICSYKAAGNVIGEFADNVM 326

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P35781|VA51_VESCR Venom allergen 5.01 OS=Vespa crabro PE=1 SV=1

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 12/103 (11%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNP-DTINTDTSRF 60
           ++S    +G+N+    ++     D    V + V  W  E+  Y  YG+P + +N      
Sbjct: 102 RNSAKYSVGQNI----AEGSTTADNFGSVSNMVKMWEDEVKDY-QYGSPKNKLNK----- 151

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNV 103
            +GH+TQ+VW  ++ +G G  +Y+ NG   + +VCNY PAGNV
Sbjct: 152 -VGHYTQMVWAKTKEIGCGSIKYIENGWHRHYLVCNYGPAGNV 193

Vespa crabro (taxid: 7445)

>sp|P86870|VA5_VESMG Venom allergen 5 OS=Vespa magnifica PE=1 SV=2

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 14/102 (13%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           KHS G  + +     AS           V + V  W  E+  Y  YG+     T      
Sbjct: 129 KHSVGQNIAQQSTTAASFGS--------VSNMVQMWADEVKNY-QYGS-----TKNKLIE 174

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNV 103
           +GH+TQ+VW  ++ +G G  +Y+ NG   + +VCNY PAGN+
Sbjct: 175 VGHYTQMVWAKTKEIGCGSIKYIENGWHRHYLVCNYGPAGNI 216

Vespa magnifica (taxid: 202807)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
170028182	234	cysteine-rich venom protein [Culex quinq	0.525	0.397	0.456	1e-14
242010463	244	conserved hypothetical protein [Pediculu	0.604	0.438	0.357	1e-12
357603760	276	SCP-related protein [Danaus plexippus]	0.615	0.394	0.367	2e-12
118777818	146	AGAP007583-PB [Anopheles gambiae str. PE	0.531	0.643	0.419	2e-12
242003910	251	conserved hypothetical protein [Ixodes s	0.542	0.382	0.398	3e-12
157118972	153	cysteine-rich secretory protein-2, putat	0.576	0.666	0.403	4e-12
170028188	312	conserved hypothetical protein [Culex qu	0.774	0.439	0.348	4e-12
427790187	268	Putative tick salivary antigen-5 protein	0.553	0.365	0.450	5e-12
157118976	508	hypothetical protein AaeL_AAEL008479 [Ae	0.587	0.204	0.387	7e-12
157141257	483	hypothetical protein AaeL_AAEL015483 [Ae	0.587	0.215	0.387	7e-12

>gi|170028182|ref|XP_001841975.1| cysteine-rich venom protein [Culex quinquefasciatus] gi|167871800|gb|EDS35183.1| cysteine-rich venom protein [Culex quinquefasciatus]

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 66/114 (57%), Gaps = 21/114 (18%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVV---EDAVDSWYSEISTYNDYGNPDTINTDT 57
           M+H +  + GENL+             K+V   EDAV SWY EI  Y  +G P   N   
Sbjct: 136 MQHRSNNRYGENLYACFG---------KIVVGGEDAVKSWYDEIKHY-RFGQPSPGNFSQ 185

Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNV 111
               +GHFTQ+VW++SR LG G+++   NG  VYIV CNYDP GN +G YASNV
Sbjct: 186 ----VGHFTQVVWKESRELGVGMAK---NGNNVYIV-CNYDPPGNFMGKYASNV 231

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010463|ref|XP_002425987.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509978|gb|EEB13249.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 16/123 (13%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           +H    K GENL+   S D      +    +A  SWY EI  YN        +++ S   
Sbjct: 128 EHRKERKYGENLYTFQSSD---PQRIATASEACKSWYDEIQKYN-------FDSEDSSLS 177

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEG 121
            GHFTQ+VW+ S+ +G G   Y    + + I+V NY+P GN VG+Y SN +   +W  EG
Sbjct: 178 SGHFTQMVWKSSKEVGMG---YAKGKSGMQIIVANYNPPGNYVGMYKSNSV---NWKMEG 231

Query: 122 PPE 124
             E
Sbjct: 232 KME 234

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357603760|gb|EHJ63916.1| SCP-related protein [Danaus plexippus]

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 27/136 (19%)

Query: 10  GENLFKTASDD--HLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQ 67
           GEN++K +S D  + IK     ++DA+++W+ E   Y +YG     + D+S   +GH+TQ
Sbjct: 158 GENIYKVSSTDPNYQIK-----MDDALEAWFEEHKDY-EYGPLSKDDFDSSGPAVGHYTQ 211

Query: 68  LVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLY------ASNVLKEGDWDDEG 121
           +VW +S Y+G G+S+   NG  VY VVCNY P+GN +G        ASN LK        
Sbjct: 212 MVWSNSVYIGCGVSQRTENGGKVYYVVCNYGPSGNYLGQRPYKSGSASNALK-------- 263

Query: 122 PPEVFCPRRTVYPHAN 137
                CP     P+ N
Sbjct: 264 -----CPNNCSKPYGN 274

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118777818|ref|XP_308292.3| AGAP007583-PB [Anopheles gambiae str. PEST] gi|116132084|gb|EAA04483.4| AGAP007583-PB [Anopheles gambiae str. PEST]

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 18/112 (16%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYN-DYGNPDTINTDTSR 59
           M+H T  K GENL+      ++        ++ VDSWY+EI  Y      P+  N     
Sbjct: 49  MQHRTNNKYGENLYACFGKTNV------TAQEPVDSWYNEIKYYRFGAAQPNFPN----- 97

Query: 60  FCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNV 111
             +GHFTQ+VW+ S+ LG GI+     GT+V+ VVCNYDP GNV G YA +V
Sbjct: 98  --VGHFTQVVWKGSQQLGVGIAA---KGTSVF-VVCNYDPPGNVYGQYAQHV 143

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003910|ref|XP_002436232.1| conserved hypothetical protein [Ixodes scapularis] gi|215499568|gb|EEC09062.1| conserved hypothetical protein [Ixodes scapularis]

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 17/113 (15%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVV--EDAVDSWYSEISTYNDYGNPDTINTDTS 58
            +H    K GEN++   S D     P K V   +AVDSWYSEI  +   G P ++ +   
Sbjct: 149 FEHRQEHKYGENIYMAWSSD-----PTKEVTGREAVDSWYSEIKDHRFGGEPRSLGS--- 200

Query: 59  RFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNV 111
               GHFTQ++W+ S  LG G +R     T   +VV NY+PAGN++G +A NV
Sbjct: 201 ----GHFTQVIWKGSTELGTGRAR---TATGKLLVVANYNPAGNMIGSFAQNV 246

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118972|ref|XP_001659274.1| cysteine-rich secretory protein-2, putative [Aedes aegypti] gi|108875522|gb|EAT39747.1| AAEL008488-PA [Aedes aegypti]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 12/114 (10%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           ++H T  K GENL+                EDAV SWY E+  Y  +G PD      S+ 
Sbjct: 48  LQHRTEKKYGENLYAQFGKTQCSG------EDAVQSWYKELKDYT-FGQPDP-GVKFSK- 98

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKE 114
            +GHFTQ+VW+ S+ LG GI+  + +G     VVCNYDP GN    YA NV ++
Sbjct: 99  -VGHFTQVVWKSSKRLGVGIA--IASGGKGVFVVCNYDPPGNFKNRYADNVAEK 149

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028188|ref|XP_001841978.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871803|gb|EDS35186.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 15/152 (9%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           + H + ++ GEN+F + S  +   + V    + V++WYSE  T+     P T+ T     
Sbjct: 22  LVHRSNSQYGENIFCSWSSPNA--NVVITGREPVENWYSEEPTHVYGKEPATLKT----- 74

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDE 120
             GHFTQ+VWRDSR LG G++R   N +    VV NYDP GN +G +A NV   G ++  
Sbjct: 75  --GHFTQVVWRDSRELGVGVAR---NRSGQVFVVANYDPPGNYIGSFAKNVAPPGGFEI- 128

Query: 121 GPPEVFCPRRTVYPHANDTQPPETYFHDDDGN 152
             P++   R  V      T  PE +    D N
Sbjct: 129 --PKIIVDRPLVDDCKVITPKPEKHVRIVDEN 158

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427790187|gb|JAA60545.1| Putative tick salivary antigen-5 protein [Rhipicephalus pulchellus]

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 13/111 (11%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           M+H T    GENL+   S D  +K P+      V  WY EI  Y D+ NP        R 
Sbjct: 128 MQHRTNPAYGENLYMWWSTD--LKAPI-TGSVPVKEWYKEIKQY-DFANPGF------RS 177

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNV 111
            IGHFTQLVW+DSR LG GI+R    GT +YI VC Y+P GN++G + + V
Sbjct: 178 DIGHFTQLVWKDSRRLGTGIARS-RKGT-IYI-VCVYNPRGNILGQFGAQV 225

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118976|ref|XP_001659276.1| hypothetical protein AaeL_AAEL008479 [Aedes aegypti] gi|108875524|gb|EAT39749.1| AAEL008479-PA [Aedes aegypti]

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 12/116 (10%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
           H + ++ GEN+F + S  +     V    + V++WYSE ST+     P T+ T       
Sbjct: 220 HRSNSQYGENIFCSWSSPNAT--VVITGREPVENWYSEESTHVYGKEPATLKT------- 270

Query: 63  GHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWD 118
           GHFTQ+VW+DSR LG G++R   N +    VV NYDP GN +G +A NV   G ++
Sbjct: 271 GHFTQVVWKDSRELGIGVAR---NRSGQVFVVANYDPPGNYIGSFAKNVPPPGGFE 323

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157141257|ref|XP_001647701.1| hypothetical protein AaeL_AAEL015483 [Aedes aegypti] gi|108867515|gb|EAT32369.1| AAEL015483-PA [Aedes aegypti]

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 12/116 (10%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
           H + ++ GEN+F + S  +     V    + V++WYSE ST+     P T+ T       
Sbjct: 195 HRSNSQYGENIFCSWSSPNAT--VVITGREPVENWYSEESTHVYGKEPATLKT------- 245

Query: 63  GHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWD 118
           GHFTQ+VW+DSR LG G++R   N +    VV NYDP GN +G +A NV   G ++
Sbjct: 246 GHFTQVVWKDSRELGIGVAR---NRSGQVFVVANYDPPGNYIGSFAKNVPPPGGFE 298

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
FB|FBgn0031412	146	CG16995 [Drosophila melanogast	0.525	0.636	0.405	1.2e-12
SGD|S000003615	299	PRY1 "Sterol binding protein i	0.395	0.234	0.468	3.2e-12
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.502	0.423	0.433	1e-11
TAIR|locus:504954862	207	AT5G57625 "AT5G57625" [Arabido	0.502	0.429	0.433	2.8e-11
UNIPROTKB|E1BYA2	154	GLIPR2 "Uncharacterized protei	0.531	0.610	0.410	7.4e-11
UNIPROTKB|F1PSF3	244	CRISP2 "Uncharacterized protei	0.581	0.422	0.368	8.6e-11
FB|FBgn0031407	170	CG4270 [Drosophila melanogaste	0.378	0.394	0.423	9.4e-11
SGD|S000003614	881	PRY3 "Cell wall-associated pro	0.389	0.078	0.45	7.1e-10
ZFIN|ZDB-GENE-030131-4424	543	glipr2 "GLI pathogenesis-relat	0.440	0.143	0.406	7.5e-10
SGD|S000001721	329	PRY2 "Sterol binding protein i	0.401	0.215	0.387	7.6e-10

FB|FBgn0031412 CG16995 [Drosophila melanogaster (taxid:7227)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 45/111 (40%), Positives = 63/111 (56%)

Query:     1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
             M+H   +  GEN++  AS  +L K       DAV SWY EI  YN + +P +   +T   
Sbjct:    49 MEHRQNSGYGENIYM-ASGGNL-KGA-----DAVRSWYEEIRQYN-WNSP-SFQGNT--- 96

Query:    61 CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNV 111
               GHFTQ+VW+ S  LG G ++   +G+ +Y VVCNY+P GN   L+  NV
Sbjct:    97 --GHFTQVVWKSSTELGVGFAK---SGSTIY-VVCNYNPPGNYNNLFRENV 141

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

SGD|S000003615 PRY1 "Sterol binding protein involved in the export of acetylated sterols" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 167 (63.8 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 37/79 (46%), Positives = 49/79 (62%)

Query:    33 AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYI 92
             AVD+WY+EIS Y D+ NP   +++T     GHFTQ+VW+ +  +G GI      G     
Sbjct:   226 AVDAWYNEISNY-DFSNPG-FSSNT-----GHFTQVVWKSTTQVGCGIK--TCGGAWGDY 276

Query:    93 VVCNYDPAGNVVGLYASNV 111
             V+C+YDPAGN  G YA NV
Sbjct:   277 VICSYDPAGNYEGEYADNV 295

GO:0032934 "sterol binding" evidence=IDA;IMP

GO:0005576 "extracellular region" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0015918 "sterol transport" evidence=IGI;IMP

GO:0000324 "fungal-type vacuole" evidence=IDA

GO:0005635 "nuclear envelope" evidence=IDA

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 46/106 (43%), Positives = 56/106 (52%)

Query:     1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
             + HSTG   GENLF  +  D            AV+SW  E  +YN   N  T   D    
Sbjct:   117 LTHSTGP-YGENLFWGSGSDF-------TSTFAVESWTVEAKSYNHMTN--TCEGDG--M 164

Query:    61 CIGHFTQLVWRDSRYLGFGISRYVY-NGTAVYIVVCNYDPAGNVVG 105
             C GH+TQ+VWR++R LG   +R V  NG  V+I  CNYDP GN VG
Sbjct:   165 C-GHYTQIVWRETRRLG--CARVVCENGAGVFIT-CNYDPPGNYVG 206

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:504954862 AT5G57625 "AT5G57625" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 46/106 (43%), Positives = 57/106 (53%)

Query:     1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
             + HSTG   GENLF  +        P      AV SW  E  +YN     +T + D S  
Sbjct:   114 LTHSTGP-YGENLFWGSGSSWA---P----GFAVQSWIVEGRSYNH----NTNSCDGSGM 161

Query:    61 CIGHFTQLVWRDSRYLGFGISRYVY-NGTAVYIVVCNYDPAGNVVG 105
             C GH+TQ+VWRD++ LG   +R V  NG  V+I  CNYDP GN VG
Sbjct:   162 C-GHYTQMVWRDTKRLG--CARVVCENGAGVFIT-CNYDPPGNYVG 203

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BYA2 GLIPR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 48/117 (41%), Positives = 63/117 (53%)

Query:     1 MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
             +KHS+ +   K GENL   AS D     P K   D  D WYSEI  Y+ + NP   ++ T
Sbjct:    52 LKHSSESASGKCGENL-AWASYDQ----PGK---DVADRWYSEIKNYS-FQNPG-FSSGT 101

Query:    58 SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVV--GLYASNVL 112
                  GHFT +VW+ ++ +G G +    +G+    VV  YDPAGNVV  G Y  NVL
Sbjct:   102 -----GHFTAMVWKSTKKMGVGKAS-ASDGST--FVVARYDPAGNVVNPGYYEENVL 150

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|F1PSF3 CRISP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 151 (58.2 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 46/125 (36%), Positives = 62/125 (49%)

Query:     5 TGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGH 64
             T TK GENL+ ++       DP     DA+ +WY E   +  YG    +   +S   IGH
Sbjct:    91 TSTKCGENLYMSS-------DPTPW-SDAIQNWYEERHNFV-YG----VGPKSSDAVIGH 137

Query:    65 FTQLVWRDSRYLGFGISRYVYNGTAV-YIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPP 123
             +TQLVW  S  +G GI+ Y  N  ++ Y  VC Y PAGN       NV K+ +   +G P
Sbjct:   138 YTQLVWYSSYRVGCGIA-YCPNQESLKYYYVCQYCPAGN-------NVSKKNNPYQQGTP 189

Query:   124 EVFCP 128
                CP
Sbjct:   190 CASCP 194

GO:0005576 "extracellular region" evidence=IEA

FB|FBgn0031407 CG4270 [Drosophila melanogaster (taxid:7227)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 33/78 (42%), Positives = 46/78 (58%)

Query:    34 VDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIV 93
             V+ WY EI++Y D+     + T       GHFTQL+W+ S  +G G++R        + V
Sbjct:   100 VEMWYREINSY-DFNKAQFVPT------AGHFTQLIWKSSVEMGSGVAR---KADRTW-V 148

Query:    94 VCNYDPAGNVVGLYASNV 111
             VCNY+P GNVVGL+  NV
Sbjct:   149 VCNYNPPGNVVGLFKDNV 166

GO:0005576 "extracellular region" evidence=IEA

SGD|S000003614 PRY3 "Cell wall-associated protein involved in export of acetylated sterols" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 154 (59.3 bits), Expect = 7.1e-10, P = 7.1e-10
 Identities = 36/80 (45%), Positives = 47/80 (58%)

Query:    33 AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVY- 91
             AVD+WY EIS YN Y NP   +  T     GHFTQ+VW+ +  +G G   Y Y GT    
Sbjct:    89 AVDAWYGEISKYN-YSNPG-FSEST-----GHFTQVVWKSTAEIGCG---YKYCGTTWNN 138

Query:    92 IVVCNYDPAGNVVGLYASNV 111
              +VC+Y+P GN +G +A  V
Sbjct:   139 YIVCSYNPPGNYLGEFAEEV 158

GO:0015918 "sterol transport" evidence=IMP

GO:0005576 "extracellular region" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0009277 "fungal-type cell wall" evidence=IDA

GO:0005618 "cell wall" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-030131-4424 glipr2 "GLI pathogenesis-related 2" [Danio rerio (taxid:7955)]

 Score = 151 (58.2 bits), Expect = 7.5e-10, P = 7.5e-10
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query:    32 DAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVY 91
             +AVDSWY EI  YN +  P   ++ T     GHFTQ+VW+D++ LG G++    +G  ++
Sbjct:    75 EAVDSWYGEIKDYN-FSRPG-FSSKT-----GHFTQVVWKDTKELGVGLAT---DGNTIF 124

Query:    92 IVVCNYDPAGNVV--GLYASNVLKEGDWDDE 120
              VV  Y PAGN+   G +  NVL  G   D+
Sbjct:   125 -VVGQYLPAGNIANAGYFEKNVLPTGSKLDQ 154

GO:0005576 "extracellular region" evidence=IEA

SGD|S000001721 PRY2 "Sterol binding protein involved in the export of acetylated sterols" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 147 (56.8 bits), Expect = 7.6e-10, P = 7.6e-10
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query:    33 AVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYI 92
             +VD+WY+EI++Y DY NP    +       GHFTQ+VW+ +  +G G+      G     
Sbjct:   256 SVDAWYNEITSY-DYSNPGFSES------AGHFTQVVWKGTSEVGCGLKSC--GGEWGDY 306

Query:    93 VVCNYDPAGNVVGLYASNVL 112
             ++C+Y  AGNV+G +A NV+
Sbjct:   307 IICSYKAAGNVIGEFADNVM 326

GO:0000324 "fungal-type vacuole" evidence=IDA

GO:0005576 "extracellular region" evidence=IEA;IDA

GO:0015918 "sterol transport" evidence=IGI;IMP

GO:0032934 "sterol binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	177
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	7e-26
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	3e-20
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	3e-18
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	1e-17
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	6e-14
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	3e-13
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	6e-10
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	3e-08
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	2e-07
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	3e-07

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 95.7 bits (239), Expect = 7e-26
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 15/103 (14%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           ++HS+ +  GENL   +     +       E+AVDSWY+EI  Y D+  P   ++ T   
Sbjct: 45  LQHSSPSGYGENLAYASGSGPDLT-----GEEAVDSWYNEIKKY-DFNKPGF-SSKT--- 94

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNV 103
             GHFTQ+VW+ S  LG G+++       VY VV  Y PAGNV
Sbjct: 95  --GHFTQVVWKSSTELGVGVAK--SKKGCVY-VVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 81.7 bits (202), Expect = 3e-20
 Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 1   MKHSTG-TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSR 59
             HST     GENL   +S       P      AV  WY E   Y       +     + 
Sbjct: 52  FGHSTPRPGYGENLAWWSSS---TALPDTYASAAVQLWYDEFQDYG----YSSNTCKDTN 104

Query: 60  FCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDP 99
             IGH+TQ+VW  +  +G G++          +VVCNYDP
Sbjct: 105 GKIGHYTQVVWAKTYKVGCGVANCPDGTKKKTVVVCNYDP 144

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 75.8 bits (187), Expect = 3e-18
 Identities = 42/105 (40%), Positives = 49/105 (46%), Gaps = 22/105 (20%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
            HS G   GENL                   AVD+WY EI  Y DY NP   +  T    
Sbjct: 46  AHSGG-PYGENLAAGYPS----------GTSAVDAWYDEIEDY-DYSNPGF-SEAT---- 88

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYI-VVCNYDPAGNVVG 105
            GHFTQLVW+ +  +G     Y   G A    +VC YDPAGNV+G
Sbjct: 89  -GHFTQLVWKSTTQVGCA---YKDCGGAWGWYIVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 74.5 bits (183), Expect = 1e-17
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 1   MKHSTGTK---LGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
            +HS       +G+NL   +S         ++ EDAV++WY+E+  Y       +  T+ 
Sbjct: 51  FEHSPCRNTGGVGQNLAAGSSTG---STVEELAEDAVNAWYNELKDYG----FGSNPTNN 103

Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYD 98
               IGHFTQ+VW  +  +G  ++R   +G    +VVCNY 
Sbjct: 104 FNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score = 65.0 bits (159), Expect = 6e-14
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 15/105 (14%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           + HS G   GENLF  +              DAV SW SE   Y DY +    NT  +  
Sbjct: 43  LVHSNG-PYGENLFWGSGG-------NWSAADAVASWVSEKKYY-DYDS----NTCAAGK 89

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
             GH+TQ+VWR++  +G        NG  V+I +CNYDP GN +G
Sbjct: 90  MCGHYTQVVWRNTTRVGCARVT-CDNGGGVFI-ICNYDPPGNYIG 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 62.9 bits (153), Expect = 3e-13
 Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 21/100 (21%)

Query: 2   KHSTG---TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTS 58
           KHS       +GENL    S D            AV +WY+EI  YN +G P       S
Sbjct: 41  KHSGEDGRGFVGENLA-AGSYD-------MTGPAAVQAWYNEIKNYN-FGQPGF-----S 86

Query: 59  RFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYD 98
               GH+TQ+VW+++  +G G     + G+  Y VVCNY 
Sbjct: 87  SGT-GHYTQVVWKNTTKIGCG---VAFCGSNSYYVVCNYG 122

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 18/101 (17%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT-SRFC 61
           H   T +GEN++       L    +   ++AV SWY+E   Y+        +T++ SR C
Sbjct: 59  HPKFTSVGENIW-------LGSIYIFSPKNAVTSWYNEGKFYD-------FDTNSCSRVC 104

Query: 62  IGHFTQLVWRDSRYLGFGIS--RYVYNGTAVYIVVCNYDPA 100
            GH+TQ+VW  S  +G  ++    +       I VCNY PA
Sbjct: 105 -GHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA 144

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 21/107 (19%)

Query: 1   MKHS-------TGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTI 53
           + HS        G   GEN+F ++        P     D + +WY E   +  YG    +
Sbjct: 46  LTHSPPNGRTIGGITCGENIFMSSY-------PRSW-SDVIQAWYDEYKDFK-YG----V 92

Query: 54  NTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPA 100
                   +GH+TQ+VW  S  +G  ++ Y  N    Y  VC+Y PA
Sbjct: 93  GATPPGAVVGHYTQIVWYKSYLVGCAVA-YCPNSKYKYFYVCHYCPA 138

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 47.2 bits (112), Expect = 2e-07
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
              G   GENL   +         V     AV++WY E   Y+     +   +       
Sbjct: 38  GYFGHDYGENLALVSVAGKADDPGVA----AVENWYDEAKDYDAAVGINAWMSS-----P 88

Query: 63  GHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNY 97
           GH T L+W  S  +G  +        + Y VVCNY
Sbjct: 89  GHRTNLLWPKSTKVGCAV--AKCGDGSSYYVVCNY 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 47.1 bits (112), Expect = 3e-07
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 16/92 (17%)

Query: 10  GENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLV 69
           GENLF       +   P      AV+ W +E        N +T     ++ C GH+TQ+V
Sbjct: 56  GENLF-------ISTGPPFDATKAVEDWNNE----KLDYNYNTNTCAPNKMC-GHYTQVV 103

Query: 70  WRDSRYLGFGISR----YVYNGTAVYIVVCNY 97
           W ++  +G G        V       ++VCNY
Sbjct: 104 WANTFKIGCGSYFCETLEVLRWENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
KOG3017|consensus	225		99.9
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	99.87
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	99.85
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	99.83
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	99.83
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	99.82
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	99.81
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	99.79
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.76
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	99.72
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.03
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	96.94
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	96.66

>KOG3017|consensus

Probab=99.90  E-value=1.3e-23  Score=166.55  Aligned_cols=116  Identities=31%  Similarity=0.406  Sum_probs=88.9

Q ss_pred             CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeec
Q psy17200          6 GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVY   85 (177)
Q Consensus         6 ~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~   85 (177)
                      ...+||||++.++.. ...+.......+++.|+.|...|+ +..+.+. ....+..+||||||||+++++||||+++|..
T Consensus        95 ~~~~GeNl~~~~~~~-~~~~~~~~~~~a~~~w~~e~~~~~-~~~~~~~-~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~  171 (225)
T KOG3017|consen   95 FGPYGENLAWGWSSN-PPLSLDTSGALAVEAWESEFQEYD-WSSNTCS-SADFGEGIGHYTQMVWAKSTKVGCGVVRCGN  171 (225)
T ss_pred             CCCCcccceeeccCC-CCccccccHHHHHHHHHHHHHHcc-CcccccC-cccCCCcceEEEEEEEeCCceeceeeccCCC
Confidence            456799998777641 123334667889999999999999 7766542 2234788999999999999999999999965


Q ss_pred             CC--CeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCCCC
Q psy17200         86 NG--TAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTV  132 (177)
Q Consensus        86 ~~--~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~~~  132 (177)
                      +.  ...+++||+|+|.||..+.        ..+|..|++||.||.++.
T Consensus       172 ~~~~~~~~~~vC~Y~p~g~~~~~--------~~~y~~g~~cs~Cp~~~~  212 (225)
T KOG3017|consen  172 GSNGYNTVAVVCNYDPPGNNING--------EIPYKGGKPCSACPSGTS  212 (225)
T ss_pred             CCCCcceEEEEEEeecCCCCcCC--------CCcCCCCCccCCCCCCCC
Confidence            53  2368999999998665542        124788999999997765

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=99.87  E-value=1.1e-21  Score=144.10  Aligned_cols=87  Identities=36%  Similarity=0.632  Sum_probs=69.4

Q ss_pred             CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecCC
Q psy17200          8 KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNG   87 (177)
Q Consensus         8 ~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~~   87 (177)
                      .+||||+.....       ...+.++|+.||+|.+.|+ +..+.+    ..+..++|||||||+++++||||++.|...+
T Consensus        49 ~~GeNi~~~~~~-------~~~~~~~v~~W~~e~~~y~-~~~~~~----~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~  116 (136)
T cd05381          49 PYGENLFWGSGG-------NWSAADAVASWVSEKKYYD-YDSNTC----AAGKMCGHYTQVVWRNTTRVGCARVTCDNGG  116 (136)
T ss_pred             CCCceEEEecCC-------CCCHHHHHHHHHhccccCC-CCCCCc----CCCccchHHHHHHHHhcCEeceEEEEeCCCC
Confidence            489999865443       2346789999999999999 765432    2346799999999999999999999995433


Q ss_pred             CeEEEEEEEeeCCCccCCccc
Q psy17200         88 TAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        88 ~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                        ..+|||+|+|+||+.|+.+
T Consensus       117 --~~~vvC~Y~p~gn~~g~~~  135 (136)
T cd05381         117 --GVFIICNYDPPGNYIGQRP  135 (136)
T ss_pred             --cEEEEEEeeCCCCCCCCCC
Confidence              3689999999999999643

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=99.85  E-value=4.3e-21  Score=139.80  Aligned_cols=84  Identities=44%  Similarity=0.779  Sum_probs=67.3

Q ss_pred             CCCCCCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEE
Q psy17200          2 KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGIS   81 (177)
Q Consensus         2 ~hs~~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~   81 (177)
                      .|+.. .+||||+..+.          .++++|+.|++|.++|+ |..+.      .+..++|||||||+++++||||++
T Consensus        46 ~~~~~-~~geNi~~~~~----------~~~~~v~~W~~e~~~y~-~~~~~------~~~~~~h~tqmvw~~t~~vGCa~~  107 (129)
T cd05384          46 AHSGG-PYGENLAAGYP----------SGTSAVDAWYDEIEDYD-YSNPG------FSEATGHFTQLVWKSTTQVGCAYK  107 (129)
T ss_pred             ecCCC-CCCcEEEEecC----------CHHHHHHHHHhhhhhCC-CCCCC------CCCcccchhhhhhhccceeeeEEE
Confidence            45554 48999986532          26789999999999999 76542      256789999999999999999999


Q ss_pred             EeecCCCeEEEEEEEeeCCCccCC
Q psy17200         82 RYVYNGTAVYIVVCNYDPAGNVVG  105 (177)
Q Consensus        82 ~c~~~~~~~~~vVC~Y~p~GN~~g  105 (177)
                      .|.. .. .++|||+|+|+||+.|
T Consensus       108 ~c~~-~~-~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384         108 DCGG-AW-GWYIVCEYDPAGNVIG  129 (129)
T ss_pred             EeCC-CC-eEEEEEEEECCCCCCc
Confidence            9953 22 4789999999999864

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=99.83  E-value=1.1e-20  Score=137.79  Aligned_cols=88  Identities=43%  Similarity=0.764  Sum_probs=70.7

Q ss_pred             CCCCCCCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEE
Q psy17200          1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGI   80 (177)
Q Consensus         1 ~~hs~~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~   80 (177)
                      +.|++...+||||+.....     .....++++|+.|++|.++|+ +..+.      ....++|||||||+++++||||+
T Consensus        45 ~~h~~~~~~GeN~~~~~~~-----~~~~~~~~~v~~W~~e~~~y~-~~~~~------~~~~~gh~tqmvw~~t~~vGCa~  112 (132)
T cd05382          45 LQHSSPSGYGENLAYASGS-----GPDLTGEEAVDSWYNEIKKYD-FNKPG------FSSKTGHFTQVVWKSSTELGVGV  112 (132)
T ss_pred             eeCCCCCCCCceeEEecCC-----CCCCCHHHHHHHHHhccccCC-CCCCC------CCCCCCCeEEeEecCCCceeeEE
Confidence            3577766799999876542     124578899999999999999 76332      25679999999999999999999


Q ss_pred             EEeecCCCeEEEEEEEeeCCCcc
Q psy17200         81 SRYVYNGTAVYIVVCNYDPAGNV  103 (177)
Q Consensus        81 ~~c~~~~~~~~~vVC~Y~p~GN~  103 (177)
                      +.|.. +  .+++||+|+|+||+
T Consensus       113 ~~~~~-~--~~~~vC~Y~p~Gn~  132 (132)
T cd05382         113 AKSKK-G--CVYVVARYRPAGNV  132 (132)
T ss_pred             EEcCC-C--CEEEEEEEeCCCCC
Confidence            99943 2  36899999999985

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=99.83  E-value=2.3e-20  Score=138.02  Aligned_cols=93  Identities=35%  Similarity=0.601  Sum_probs=72.6

Q ss_pred             CCCCCCCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEE
Q psy17200          1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGI   80 (177)
Q Consensus         1 ~~hs~~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~   80 (177)
                      +.|++...+||||++....   ..+....++.+|+.||+|.++|+ +.......   .+..++|||||||+++++||||+
T Consensus        52 ~~~~~~~~~GeNi~~~~~~---~~~~~~~~~~av~~W~~e~~~y~-~~~~~~~~---~~~~~~hftqmvw~~s~~vGCa~  124 (144)
T smart00198       52 FGHSTPRGYGENLAWWSSS---TDLPITYASAAVQLWYDEFQDYG-YSSNTCKD---TNGKIGHYTQVVWAKTYKVGCGV  124 (144)
T ss_pred             CcCCCcCCcCcceEEeccc---CcccchhHHHHHHHHHHHHHHcC-CCCCcccc---CccchhHHHHHHHHhcCCcceEE
Confidence            3577766899999766543   23456789999999999999999 76654311   25779999999999999999999


Q ss_pred             EEeecCCCeEEEEEEEeeCC
Q psy17200         81 SRYVYNGTAVYIVVCNYDPA  100 (177)
Q Consensus        81 ~~c~~~~~~~~~vVC~Y~p~  100 (177)
                      +.|..+....++|||+|+|+
T Consensus       125 ~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198      125 SNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             EECCCCCcceEEEEEecCCC
Confidence            99964433357899999983

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=99.82  E-value=2.7e-20  Score=138.21  Aligned_cols=79  Identities=33%  Similarity=0.597  Sum_probs=63.6

Q ss_pred             CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecC
Q psy17200          7 TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYN   86 (177)
Q Consensus         7 ~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~   86 (177)
                      ..+||||+.....       ...+.++|+.||+|.++|+ |..+.+      ...++|||||||+++++||||++.|...
T Consensus        63 ~~~GeNi~~~~~~-------~~~~~~av~~W~~e~~~y~-~~~~~~------~~~~ghftqmvw~~t~~vGCa~~~c~~~  128 (144)
T cd05385          63 TSVGENIWLGSIY-------IFSPKNAVTSWYNEGKFYD-FDTNSC------SRVCGHYTQVVWATSYKVGCAVAFCPNL  128 (144)
T ss_pred             CcccceeeecccC-------CCCHHHHHHHHHHHHHhCC-CCCCCC------CCcccCHHHHHHhhccccceEEEECCCC
Confidence            4689999765433       2468899999999999999 765432      4579999999999999999999999653


Q ss_pred             C--CeEEEEEEEeeC
Q psy17200         87 G--TAVYIVVCNYDP   99 (177)
Q Consensus        87 ~--~~~~~vVC~Y~p   99 (177)
                      +  ...++|||+|+|
T Consensus       129 ~~~~~~~~vVC~Y~p  143 (144)
T cd05385         129 GGIPNAAIFVCNYAP  143 (144)
T ss_pred             CCccccEEEEEeCCC
Confidence            3  124789999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=99.81  E-value=6.3e-20  Score=135.31  Aligned_cols=79  Identities=30%  Similarity=0.662  Sum_probs=62.9

Q ss_pred             CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecCC
Q psy17200          8 KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNG   87 (177)
Q Consensus         8 ~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~~   87 (177)
                      .+||||+.....        ..+.++|+.||+|.++|+ |....    +..+..++|||||||+++++||||++.|..+ 
T Consensus        60 ~~GeNl~~~~~~--------~~~~~av~~W~~e~~~y~-~~~~~----~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~-  125 (138)
T cd05383          60 TCGENIFMSSYP--------RSWSDVIQAWYDEYKDFK-YGVGA----TPPGAVVGHYTQIVWYKSYLVGCAVAYCPNS-  125 (138)
T ss_pred             CcceeeeccCCC--------CCHHHHHHHHHHHHHhCC-CCCCC----CCCCCchhhHHHHHHHhccccceEEEECCCC-
Confidence            579999865433        246789999999999999 76543    1346789999999999999999999999543 


Q ss_pred             CeEEEEEEEeeCC
Q psy17200         88 TAVYIVVCNYDPA  100 (177)
Q Consensus        88 ~~~~~vVC~Y~p~  100 (177)
                      ...++|||+|+|+
T Consensus       126 ~~~~~~vC~Y~P~  138 (138)
T cd05383         126 KYKYFYVCHYCPA  138 (138)
T ss_pred             CcCEEEEEecCCC
Confidence            2247899999983

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=99.79  E-value=1.6e-19  Score=132.92  Aligned_cols=86  Identities=29%  Similarity=0.522  Sum_probs=65.9

Q ss_pred             CCCCCCC---CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEE
Q psy17200          1 MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLG   77 (177)
Q Consensus         1 ~~hs~~~---~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VG   77 (177)
                      +.|++..   .+||||+...+.       ...+.++|+.||+|.++|+ |....+    ..+..++|||||||+++++||
T Consensus        44 ~~~~~~~~~~~~GeNl~~~~~~-------~~~~~~~v~~W~~e~~~y~-~~~~~~----~~~~~~~hftqmvw~~t~~vG  111 (136)
T cd05559          44 WDHNPDRGHLRVGENLFISTGP-------PFDATKAVEDWNNEKLDYN-YNTNTC----APNKMCGHYTQVVWANTFKIG  111 (136)
T ss_pred             ccCCCcccCCCceeeeeecCCC-------CCCHHHHHHHHHHHHHhcC-CCCCCC----CCCCcccchHHHHHhccCccc
Confidence            3566633   699999866543       2457889999999999999 765432    235679999999999999999


Q ss_pred             EEEEEeecCCC----eEEEEEEEee
Q psy17200         78 FGISRYVYNGT----AVYIVVCNYD   98 (177)
Q Consensus        78 Ca~~~c~~~~~----~~~~vVC~Y~   98 (177)
                      ||++.|.....    ..++|||+|+
T Consensus       112 Ca~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559         112 CGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             eEEEECCCCCCCCcccCEEEEecCC
Confidence            99999954321    2478999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.76  E-value=3.2e-18  Score=125.78  Aligned_cols=90  Identities=36%  Similarity=0.680  Sum_probs=70.2

Q ss_pred             CCCCCC---CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEE
Q psy17200          2 KHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGF   78 (177)
Q Consensus         2 ~hs~~~---~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGC   78 (177)
                      .|+...   .+||||+......   .+....++++|+.||+|.+.|+ +...   ........++|||||||+++++|||
T Consensus        52 ~~~~~~~~~~~GeNl~~~~~~~---~~~~~~~~~~v~~W~~e~~~~~-~~~~---~~~~~~~~~~hftq~vw~~t~~vGC  124 (144)
T cd05380          52 EHSPCRNTGGVGQNLAAGSSTG---STVEELAEDAVNAWYNELKDYG-FGSN---PTNNFNSGIGHFTQMVWAKTTKVGC  124 (144)
T ss_pred             cCCcccCCCCCCcEEEEeccCC---CCHHHHHHHHHHHHHHHHHHcC-CCcC---cccccccchhHHHHHHHHhcCccce
Confidence            566543   7999998776541   2456789999999999999999 7653   2223467899999999999999999


Q ss_pred             EEEEeecCCCeEEEEEEEee
Q psy17200         79 GISRYVYNGTAVYIVVCNYD   98 (177)
Q Consensus        79 a~~~c~~~~~~~~~vVC~Y~   98 (177)
                      |++.|...+....+|||+|+
T Consensus       125 a~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380         125 AVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             EEEEeecCCceEEEEEecCC
Confidence            99999654334689999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=99.72  E-value=2.9e-17  Score=118.30  Aligned_cols=80  Identities=40%  Similarity=0.736  Sum_probs=63.4

Q ss_pred             CCCCCC---CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEE
Q psy17200          1 MKHSTG---TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLG   77 (177)
Q Consensus         1 ~~hs~~---~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VG   77 (177)
                      +.|++.   ..+||||+.....        ..+..+|+.|++|.++|+ |....      .+..++||+||||+++++||
T Consensus        40 ~~h~~~~~~~~~geNi~~~~~~--------~~~~~~v~~W~~e~~~y~-~~~~~------~~~~~~h~~qmvw~~s~~vG  104 (122)
T cd00168          40 FKHSGEDGRGFVGENLAAGSYD--------MTGPAAVQAWYNEIKNYN-FGQPG------FSSGTGHYTQVVWKNTTKIG  104 (122)
T ss_pred             ccCCCcccCCCCCceeEEecCC--------CCHHHHHHHHHHHHHhCC-CCCCC------CCCCccchhhhhcccCCeee
Confidence            357663   3689999876542        357899999999999999 76432      25678999999999999999


Q ss_pred             EEEEEeecCCCeEEEEEEEee
Q psy17200         78 FGISRYVYNGTAVYIVVCNYD   98 (177)
Q Consensus        78 Ca~~~c~~~~~~~~~vVC~Y~   98 (177)
                      ||++.|.. +  ..++||+|.
T Consensus       105 ca~~~~~~-~--~~~~vC~Y~  122 (122)
T cd00168         105 CGVAFCGS-N--SYYVVCNYG  122 (122)
T ss_pred             eEEEEcCC-C--CEEEEEeCc
Confidence            99999943 3  368999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.03  E-value=1.3e-09  Score=75.66  Aligned_cols=83  Identities=30%  Similarity=0.522  Sum_probs=54.5

Q ss_pred             CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecC
Q psy17200          7 TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYN   86 (177)
Q Consensus         7 ~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~   86 (177)
                      ...|+|+......    .........+++.|+.+...+. +.....+.  .....++||+||+|..+++||||++.|...
T Consensus        42 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~h~~~ll~~~~~~iGca~~~~~~~  114 (124)
T PF00188_consen   42 HDSGENGSQSSRF----GSYSDAQVTAVENWYSESKNYN-FQNQSIFN--SWMNSPGHFTNLLWPNTTRIGCAVANCPNG  114 (124)
T ss_dssp             EESEEEEEEESST----TSHHHHHHHHHHHHHGGGGGEE-TTCSTEES--STTSTCHHHHHHT-TT--EEEEEEEEETTS
T ss_pred             cccCCCCcccccc----ccccchhhHHHHHHHhcccccc-cccchhhh--ccCCchhhhhhhhcCCCCEEEEEEEEeCCC
Confidence            4468888655443    2223333333899999999988 54211111  225667999999999999999999999544


Q ss_pred             CCeEEEEEEEe
Q psy17200         87 GTAVYIVVCNY   97 (177)
Q Consensus        87 ~~~~~~vVC~Y   97 (177)
                      .. .+++||+|
T Consensus       115 ~~-~~~~vc~y  124 (124)
T PF00188_consen  115 KN-NYYWVCNY  124 (124)
T ss_dssp             SS-EEEEEEEE
T ss_pred             Ce-eEEEEEEC
Confidence            33 48999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=96.94  E-value=0.0027  Score=45.90  Aligned_cols=46  Identities=24%  Similarity=0.341  Sum_probs=35.3

Q ss_pred             CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEee
Q psy17200          8 KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYV   84 (177)
Q Consensus         8 ~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~   84 (177)
                      .+||||.....          ....+++.|++.                     .+|+.+|+|...+++|+|++.+.
T Consensus        70 ~~gENi~~g~~----------~~~~~v~~W~~S---------------------~gH~~nil~~~~~~~Gvg~~~~~  115 (127)
T TIGR02909        70 MAGENIAYGNS----------TVEAVHNAWMNS---------------------PGHRANILNPNYTEIGVGYVEGG  115 (127)
T ss_pred             cceeeeeccCC----------CHHHHHHHHHcC---------------------HhHHHHHcCCCcCeEeEEEEeCC
Confidence            46999974432          256788899631                     37999999999999999999873

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=96.66  E-value=0.0056  Score=42.83  Aligned_cols=44  Identities=32%  Similarity=0.448  Sum_probs=33.8

Q ss_pred             ccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEee
Q psy17200         10 GENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYV   84 (177)
Q Consensus        10 GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~   84 (177)
                      |||+.....          ...++++.|+++                     .+|+.+|+|...+++|||+....
T Consensus        68 ~eni~~~~~----------~~~~~~~~w~~~---------------------~~H~~~ll~~~~~~~Gvg~~~~~  111 (122)
T cd05379          68 GENIAYGYS----------TAEAAVDGWMNS---------------------PGHRANILNPDYTEVGVGVAYGG  111 (122)
T ss_pred             chhhcccCC----------CHHHHHHHHhCC---------------------HhHHHHHcCCCcceeeEEEEeCC
Confidence            788753322          466888889531                     37999999999999999999873

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	177
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		6e-10
1qnx_A	209	Ves V 5, An Allergen From Vespula Vulgaris Venom Le		3e-08
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		2e-07
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		2e-07
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		6e-07
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		7e-07
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		1e-06
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		4e-06
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		5e-06
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		1e-05
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		2e-05
3nt8_A	424	Crystal Structure Of Na-Asp-1 Length = 424		2e-04

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 9   LGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQL 68
           LGEN+F  +SD  +  D  K  E A  +W+ E++      N        SR  +GH+TQ+
Sbjct: 83  LGENIF-MSSDSGM--DKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRG-VGHYTQM 138
Query: 69  VWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
           VW+++  LG     YV   + +  VVC Y PAGN++G
Sbjct: 139 VWQETVKLGC----YVEACSNMCYVVCQYGPAGNMMG 171

>pdb|1QNX|A Chain A, Ves V 5, An Allergen From Vespula Vulgaris Venom Length = 209

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 8   KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQ 67
           ++G+N+  T S      DPVK+V+     W  E+  YN    P    +       GH+TQ
Sbjct: 113 QVGQNVALTGSTAAKYDDPVKLVK----MWEDEVKDYN----PKKKFSGNDFLKTGHYTQ 164
Query: 68  LVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGN 102
           +VW +++ +G G  +Y+      + +VCNY P+GN
Sbjct: 165 MVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGN 199

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 1   MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
           +KHS  +   + GENL   + D        +  ++  D WYSEI  YN +  P   +   
Sbjct: 52  LKHSPESSRGQXGENLAWASYD--------QTGKEVADRWYSEIKNYN-FQQPGFTS--- 99
Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVV--GLYASNVL 112
                GHFT +VW++++ +G G +    +G++   VV  Y PAGNVV  G +  NVL
Sbjct: 100 ---GTGHFTAMVWKNTKKMGVGKAS-ASDGSS--FVVARYFPAGNVVNEGFFEENVL 150

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 23/117 (19%)
Query: 1   MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
           +KHS  +   + GENL   + D        +  ++  D WYSEI  YN +  P   +   
Sbjct: 52  LKHSPESSRGQCGENLAWASYD--------QTGKEVADRWYSEIKNYN-FQQPGFTS--- 99
Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVV--GLYASNVL 112
                GHFT +VW++++ +G G +    +G++   VV  Y PAGNVV  G +  NVL
Sbjct: 100 ---GTGHFTAMVWKNTKKMGVGKAS-ASDGSS--FVVARYFPAGNVVNEGFFEENVL 150

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 12  NLFKTASDDHLIKDPVKVV-EDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVW 70
           NL  + + ++L K         AV  W SE  +YN Y     +     R    H+TQ+VW
Sbjct: 45  NLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYN-YATNQCVGGKKCR----HYTQVVW 99
Query: 71  RDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
           R+S  LG G +R   NG   + + CNYDP GN +G
Sbjct: 100 RNSVRLGCGRAR-CNNGW--WFISCNYDPVGNWIG 131

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 23/125 (18%)
Query: 8   KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQ 67
           + GEN+F ++                V +WY EI  +  YG    I        IGH+TQ
Sbjct: 63  RCGENIFMSSQPFPW--------SGVVQAWYDEIKNF-VYG----IGAKPPGSVIGHYTQ 109
Query: 68  LVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFC 127
           +VW  S  +G   ++     ++ Y+ VC Y PAGN+ G  A+           GPP   C
Sbjct: 110 VVWYKSHLIGCASAKC---SSSKYLYVCQYCPAGNIRGSIATPY-------KSGPPCADC 159
Query: 128 PRRTV 132
           P   V
Sbjct: 160 PSACV 164

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 23/125 (18%)
Query: 8   KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQ 67
           + GEN+F ++                V +WY EI  +  YG    I        IGH+TQ
Sbjct: 64  RCGENIFMSSQPFPW--------SGVVQAWYDEIKNF-VYG----IGAKPPGSVIGHYTQ 110
Query: 68  LVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFC 127
           +VW  S  +G   ++     ++ Y+ VC Y PAGN+ G  A+           GPP   C
Sbjct: 111 VVWYKSYLIGCASAKC---SSSKYLYVCQYCPAGNIRGSIATPY-------KSGPPCADC 160
Query: 128 PRRTV 132
           P   V
Sbjct: 161 PSACV 165

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 11/101 (10%)
Query: 9   LGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQL 68
           +G+N+  T+S       P     + +  WY+E+  +++       + D     +GH+TQ+
Sbjct: 111 VGQNIAATSSSGKNKSTP----NEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQI 166
Query: 69  VWRDSRYLGFGISRYVY----NGTAVYIVVCNYDPAGNVVG 105
           VW  +  +G G  R ++    N T  Y+ VCNY PAGNV+G
Sbjct: 167 VWAKTTKIGCG--RIMFKEPDNWTKHYL-VCNYGPAGNVLG 204

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 6   GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHF 65
           G K GEN++       +   P K   D + +W+ E   +  YG    +    S   IGH+
Sbjct: 70  GIKCGENIY-------MATYPAKWT-DIIHAWHGEYKDFK-YG----VGAVPSDAVIGHY 116
Query: 66  TQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEV 125
           TQ+VW  S   G   + Y  +    Y  VC Y PAGN++G  A+           GPP  
Sbjct: 117 TQIVWYKSYRAGCAAA-YCPSSKYSYFYVCQYCPAGNIIGKTATPY-------KSGPPCG 168
Query: 126 FCP 128
            CP
Sbjct: 169 DCP 171

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 6   GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHF 65
           G K GEN++       +   P+K   D + +W+ E   +  YG    +  D      GH+
Sbjct: 70  GIKCGENIY-------MSPYPMKWT-DIIHAWHDEYKDF-KYG----VGADPPNAVTGHY 116
Query: 66  TQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYAS 109
           TQ+VW  S  +G   + Y  +    Y  VC Y PAGN +G  A+
Sbjct: 117 TQIVWYKSYRIGCAAA-YCPSSPYSYFFVCQYCPAGNFIGKTAT 159

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 25/108 (23%)
Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
           H   T LGEN++  +        P+  V  A+ +WY EI  Y+         T   +   
Sbjct: 75  HPNFTSLGENIWTGSV-------PIFSVSSAITNWYDEIQDYD-------FKTRICKKVC 120
Query: 63  GHFTQLVWRDSRYLGFGISRY--------VYNGTAVYIVVCNYDPAGN 102
           GH+TQ+VW DS  +G  +           + NG      +CNY P GN
Sbjct: 121 GHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAH---FICNYGPGGN 165

>pdb|3NT8|A Chain A, Crystal Structure Of Na-Asp-1 Length = 424

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 9   LGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINT---DTSRFCIGHF 65
           LGEN++KT+    L  D  K  + A   W++E+  Y   G  + + T   +     IGH+
Sbjct: 304 LGENIYKTSV---LKFDKNKAAKQASQLWWNELKEYG-VGPSNVLTTALWNRPNMQIGHY 359
Query: 66  TQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
           TQ+ W  +  LG  +   V+     +  VC Y P GN +G
Sbjct: 360 TQMAWDTTYKLGCAV---VFCNDFTF-GVCQYGPGGNYMG 395

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	2e-26
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	2e-24
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	2e-24
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	3e-24
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	4e-22
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-21
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-20
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	2e-21
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	1e-20
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	8e-20
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	5e-15
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	8e-08

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score = 97.4 bits (243), Expect = 2e-26
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 23/118 (19%)

Query: 1   MKHSTGTKL---GENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
           +KHS  +     GENL   + D        +  ++  D WYSEI  Y ++  P   +   
Sbjct: 52  LKHSPESSRGQCGENLAWASYD--------QTGKEVADRWYSEIKNY-NFQQPGFTSG-- 100

Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG--LYASNVLK 113
                GHFT +VW++++ +G G +           VV  Y PAGNVV    +  NVL 
Sbjct: 101 ----TGHFTAMVWKNTKKMGVGKASASDGS---SFVVARYFPAGNVVNEGFFEENVLP 151

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score = 93.7 bits (233), Expect = 2e-24
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 8/103 (7%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
                ++G+N+  T S               V  W  E+  YN    P    +       
Sbjct: 108 DVAKYQVGQNVALTGSTA----AKYDDPVKLVKMWEDEVKDYN----PKKKFSGNDFLKT 159

Query: 63  GHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
           GH+TQ+VW +++ +G G  +Y+      + +VCNY P+GN   
Sbjct: 160 GHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKN 202

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score = 93.0 bits (231), Expect = 2e-24
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 1   MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
            KHS       LGEN+F ++       D  K  E A  +W+ E++     G    +    
Sbjct: 72  FKHSQPNQRKGLGENIFMSSDSG---MDKAKAAEQASKAWFGELAEKG-VGQNLKLTGGL 127

Query: 58  SRFCIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
               +GH+TQ+VW+++  LG  +     N      VVC Y PAGN++G
Sbjct: 128 FSRGVGHYTQMVWQETVKLGCYVEAC-SNM---CYVVCQYGPAGNMMG 171

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score = 90.8 bits (226), Expect = 3e-24
 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 19/105 (18%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
           + HS     GENL K   D             AV  W SE  +YN Y      N      
Sbjct: 46  LIHS---GAGENLAKGGGD--------FTGRAAVQLWVSERPSYN-YAT----NQCVGGK 89

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
              H+TQ+VWR+S  LG G +R        + + CNYDP GN +G
Sbjct: 90  KCRHYTQVVWRNSVRLGCGRARCNNGW---WFISCNYDPVGNWIG 131

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score = 87.7 bits (217), Expect = 4e-22
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 1   MKHST-----GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINT 55
            +H          +G+N+  T+S             + +  WY+E+  +++       + 
Sbjct: 98  FEHDACRNVERFAVGQNIAATSSSG----KNKSTPNEMILLWYNEVKDFDNRWISSFPSD 153

Query: 56  DTSRFCIGHFTQLVWRDSRYLGFGISRYV-YNGTAVYIVVCNYDPAGNVVG 105
           D     +GH+TQ+VW  +  +G G   +   +    + +VCNY PAGNV+G
Sbjct: 154 DNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLG 204

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 89.0 bits (220), Expect = 2e-21
 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 1   MKHSTGT---KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT 57
            +HS G     LGEN++KT+       D  K  + A   W++E+  Y   G  + + T  
Sbjct: 293 YQHSHGEDRPGLGENIYKTSVLK---FDKNKAAKQASQLWWNELKEYG-VGPSNVLTTAL 348

Query: 58  SRFC---IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
                  IGH+TQ+ W  +  LG  +             VC Y P GN +G
Sbjct: 349 WNRPNMQIGHYTQMAWDTTYKLGCAVVFC----NDFTFGVCQYGPGGNYMG 395

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 86.3 bits (213), Expect = 2e-20
 Identities = 19/177 (10%), Positives = 43/177 (24%), Gaps = 10/177 (5%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
              +    + +N    +S      DP   +E  +  W+S         +           
Sbjct: 91  SGFAGIQGVAQNTMSWSSSGG-YPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGG---- 145

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDE 120
            +  F+ +V+ ++  LG               V C Y+  G +         +      +
Sbjct: 146 -LFAFSNMVYSETTKLGCAYKVC----GTKLAVSCIYNGVGYITNQPMWETGQACQTGAD 200

Query: 121 GPPEVFCPRRTVYPHANDTQPPETYFHDDDGNIIDLEGNVYVDTARYYLQRRANGQA 177
                               P        +  + D   + ++     +    A G  
Sbjct: 201 CSTYKNSGCEDGLCTKGPDVPETNQQCPSNTGMTDSVRDTFLSVHNEFRSSVARGLE 257

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score = 85.7 bits (212), Expect = 2e-21
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 15/116 (12%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           +   G + GE+++ +++             + +  W+ E   +          +      
Sbjct: 66  RVLEGIQCGESIYMSSNART--------WTEIIHLWHDEYKNFVYGVGASPPGSV----- 112

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDW 117
            GH+TQ+VW  +   G  +S    +    Y  VC Y P+GN  G  A+   K G  
Sbjct: 113 TGHYTQIVWYQTYRAGCAVSYC-PSSAWSYFYVCQYCPSGNFQGKTATPY-KLGPP 166

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score = 83.4 bits (206), Expect = 1e-20
 Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
            +     + GEN+F ++                V +WY EI  +  YG            
Sbjct: 56  TRTVGKLRCGENIFMSSQPF--------PWSGVVQAWYDEIKNFV-YGI----GAKPPGS 102

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDE 120
            IGH+TQ+VW  S  +G   ++   +    Y+ VC Y PAGN+ G  A+           
Sbjct: 103 VIGHYTQVVWYKSHLIGCASAKCSSSK---YLYVCQYCPAGNIRGSIATPY-------KS 152

Query: 121 GPPEVFCP 128
           GPP   CP
Sbjct: 153 GPPCADCP 160

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score = 81.5 bits (201), Expect = 8e-20
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 19/108 (17%)

Query: 3   HSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCI 62
           H   T LGEN++  +        P+  V  A+ +WY EI  Y+         T   +   
Sbjct: 75  HPNFTSLGENIWTGSV-------PIFSVSSAITNWYDEIQDYD-------FKTRICKKVC 120

Query: 63  GHFTQLVWRDSRYLGFGISRY-----VYNGTAVYIVVCNYDPAGNVVG 105
           GH+TQ+VW DS  +G  +            +     +CNY P GN   
Sbjct: 121 GHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNYPT 168

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 69.3 bits (169), Expect = 5e-15
 Identities = 14/96 (14%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 10  GENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLV 69
           G+  FK + D        ++++DAV   + +          +    +     +      +
Sbjct: 105 GQLNFKYSGDKL--PRIKELIDDAVKKGHLQKHNIT-REIIENYRENGPNGDVKELALAI 161

Query: 70  WRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
                 +G G++ +     A  ++ CN+    N  G
Sbjct: 162 SDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNTRG 196

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 48.9 bits (116), Expect = 8e-08
 Identities = 8/87 (9%), Positives = 23/87 (26%), Gaps = 23/87 (26%)

Query: 25  DPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYV 84
             +  +++ ++++ ++                          Q+V+  +   G       
Sbjct: 87  SAISALKEILETFSADK---------------------NSMRQVVYPKATRFGCSGRLRR 125

Query: 85  YNGTAVY--IVVCNYDPAGNVVGLYAS 109
              T +     VC YD        +  
Sbjct: 126 NKKTGMRRMDWVCVYDKKPKDGESFEG 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.97
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	99.95
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	99.94
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	99.94
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	99.94
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	99.94
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	99.94
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.92
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	99.9
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	99.89
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	99.88
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.87
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	95.61
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	95.13
4ifa_A	339	Extracellular protein containing A SCP domain; vac	95.06
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	93.85

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.97  E-value=3.4e-31  Score=226.33  Aligned_cols=156  Identities=13%  Similarity=0.177  Sum_probs=121.6

Q ss_pred             CCCCCCCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEE
Q psy17200          1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGI   80 (177)
Q Consensus         1 ~~hs~~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~   80 (177)
                      +.|+....+||||+...... ...+....++++|+.||+|+++|+ +.....   + .+..++|||||||+++++||||+
T Consensus        91 ~~h~~~~~~GeNl~~~~~~~-~~~~~~~~~~~~v~~W~~E~~~y~-~~~~~~---~-~~~~~ghfTqmvw~~t~~vGCa~  164 (424)
T 3nt8_A           91 SGFAGIQGVAQNTMSWSSSG-GYPDPSVKIEPTLSGWWSGAKKNG-VGPDNK---Y-TGGGLFAFSNMVYSETTKLGCAY  164 (424)
T ss_dssp             SSCCCCTTCEEEEEEEECTT-CCSCGGGGHHHHHHHHHTHHHHHC-CCTTCB---C-CCTTCHHHHHHHCTTCCEEEEEE
T ss_pred             CcCCCCCCceeeEEeccccC-CcCCHHHHHHHHHHHHHHHHHHcC-Cccccc---C-CCcchHHHHHHHHHhcCeeceEE
Confidence            45888888999997654321 223456678999999999999999 764222   1 24578999999999999999999


Q ss_pred             EEeecCCCeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCC---CCCCCCCC----CCCCCCCC---CCCceeeCCC
Q psy17200         81 SRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPE---VFCPRRTV----YPHANDTQ---PPETYFHDDD  150 (177)
Q Consensus        81 ~~c~~~~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pc---s~C~~~~~----y~~~~~~~---p~~~~~~~~~  150 (177)
                      +.|..    .+++||+|+|.||+.|+.+         |+.|+||   |.|+.+..    -..|..+.   +.+..|+.+.
T Consensus       165 ~~c~~----~~~~VC~Y~p~GN~~g~~~---------Y~~G~~c~~~s~C~~g~~~~c~~~lC~~~~~~i~~~~~C~~~~  231 (424)
T 3nt8_A          165 KVCGT----KLAVSCIYNGVGYITNQPM---------WETGQACQTGADCSTYKNSGCEDGLCTKGPDVPETNQQCPSNT  231 (424)
T ss_dssp             EEETT----EEEEEEEESSCCCSTTCBS---------SEESCCBSSGGGCCSSTTCEEETBEEECCCCCCCCCCSCTTCC
T ss_pred             EEeCC----cEEEEEEECCCCCcccccc---------cccCCCCCCCCCcccCCCCcccccccCCCCCcCCCCCCCCCCC
Confidence            99942    5899999999999999654         6789999   88986421    12442211   3456788887


Q ss_pred             CCceeecceEEEechhhhHhhhhcCC
Q psy17200        151 GNIIDLEGNVYVDTARYYLQRRANGQ  176 (177)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (177)
                       .|+++.|+.+||.||.||+++|+|+
T Consensus       232 -~~~~~~~~~iL~~HN~~R~~~a~G~  256 (424)
T 3nt8_A          232 -GMTDSVRDTFLSVHNEFRSSVARGL  256 (424)
T ss_dssp             -SCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence             8999999999999999999999884

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=99.95  E-value=5.7e-28  Score=186.94  Aligned_cols=111  Identities=32%  Similarity=0.582  Sum_probs=86.9

Q ss_pred             CCCCC---CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEE
Q psy17200          1 MKHST---GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLG   77 (177)
Q Consensus         1 ~~hs~---~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VG   77 (177)
                      +.|++   ...+||||+++...   ..+....+.++|+.||+|+++|+ +.....+.....+..++|||||||+++++||
T Consensus        72 ~~h~~~~~~~~~GeNl~~~~~~---~~~~~~~~~~~v~~W~~E~~~y~-~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vG  147 (196)
T 1u53_A           72 FKHSQPNQRKGLGENIFMSSDS---GMDKAKAAEQASKAWFGELAEKG-VGQNLKLTGGLFSRGVGHYTQMVWQETVKLG  147 (196)
T ss_dssp             CCCCCGGGSTTCEEEEEEESCT---TCCHHHHHHHHHHHHHTHHHHHC-CCSCCBCCHHHHTTTCHHHHHHTCTTCCEEE
T ss_pred             cCCCccccCCCCCeEEEEECCC---CCCHHHHHHHHHHHHHHHHHHcC-CCcccccCccccCccccchheeeecccCEEe
Confidence            56884   45799999866443   23445678999999999999999 7652111111125679999999999999999


Q ss_pred             EEEEEeecCCCeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCC
Q psy17200         78 FGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCP  128 (177)
Q Consensus        78 Ca~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~  128 (177)
                      ||++.|..    .+++||+|+|.||+.|+++         |+.|+|||.||
T Consensus       148 Ca~~~c~~----~~~~VC~Y~p~GN~~g~~~---------Y~~G~pcs~C~  185 (196)
T 1u53_A          148 CYVEACSN----MCYVVCQYGPAGNMMGKDI---------YEKGEPCSKCE  185 (196)
T ss_dssp             EEEEECSS----CEEEEEEEESCCCCTTSBS---------SCBSSTTTTCS
T ss_pred             eEEEEeCC----CEEEEEEeCCCCCCCCCcC---------CccCCCCCCCC
Confidence            99999942    3799999999999999764         68899999999

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=99.94  E-value=2.3e-27  Score=185.80  Aligned_cols=114  Identities=33%  Similarity=0.623  Sum_probs=88.0

Q ss_pred             CCCCCCC-------CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhcc
Q psy17200          1 MKHSTGT-------KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDS   73 (177)
Q Consensus         1 ~~hs~~~-------~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~t   73 (177)
                      |.||+..       .+||||++++..        ..+.++|+.||+|+++|+ |..+.    ...+..+||||||||+++
T Consensus        49 ~~Hs~~~~r~~~~~~~GENl~~~~~~--------~~~~~av~~W~~E~~~y~-~~~~~----~~~~~~~gHfTQ~VW~~t  115 (210)
T 2ddb_A           49 FAHSPPNTRTVGKLRCGENIFMSSQP--------FPWSGVVQAWYDEIKNFV-YGIGA----KPPGSVIGHYTQVVWYKS  115 (210)
T ss_dssp             CSCCCGGGSEETTEECEEEEEEESSC--------CCHHHHHHHHHGGGGGEE-TTTEE----SSTTSCCHHHHHHTCTTC
T ss_pred             CCCCCccccccCCCCCcceEEEEcCC--------CCHHHHHHHHHHHhhhCC-CCCCC----CCCCCcccchhhhhhhhc
Confidence            5687521       479999877543        136789999999999999 76532    223577999999999999


Q ss_pred             ceEEEEEEEeecCCCeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCCCCCCCCC
Q psy17200         74 RYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHAN  137 (177)
Q Consensus        74 t~VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~~~y~~~~  137 (177)
                      ++||||++.|.. +  .+++||+|+|+||+.|++.      ++ |+.|+|||.||.+..-.+|.
T Consensus       116 ~~vGCa~~~c~~-~--~~~~VC~Y~P~GN~~g~~~------~p-Y~~G~pcs~C~~~c~~gLC~  169 (210)
T 2ddb_A          116 HLIGCASAKCSS-S--KYLYVCQYCPAGNIRGSIA------TP-YKSGPPCADCPSACVNRLCT  169 (210)
T ss_dssp             CEEEEEEEEEET-T--EEEEEEEEESCSSSTTCTT------CS-SCBSSTTTTCTTSEETTEEC
T ss_pred             cEeeEEEEEcCC-C--CEEEEEEeeCCCCCCCCcc------CC-CCcCcCccccCCCCCCCCCC
Confidence            999999999953 3  4799999999999999741      22 68999999999654334454

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=99.94  E-value=2.3e-27  Score=187.12  Aligned_cols=116  Identities=26%  Similarity=0.488  Sum_probs=88.7

Q ss_pred             CCCCCCC-------CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhcc
Q psy17200          1 MKHSTGT-------KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDS   73 (177)
Q Consensus         1 ~~hs~~~-------~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~t   73 (177)
                      |.||+..       .+||||+++...        ..+.++|+.||+|+++|+ |..+.    ...+..+||||||||+++
T Consensus        58 ~~Hs~~~~r~~~~~~~GENl~~~~~~--------~~~~~av~~W~~E~~~y~-~~~~~----~~~~~~~gHfTQ~VW~~t  124 (221)
T 1xta_A           58 LNHSPDNLRVLEGIQCGESIYMSSNA--------RTWTEIIHLWHDEYKNFV-YGVGA----SPPGSVTGHYTQIVWYQT  124 (221)
T ss_dssp             CSCCCGGGCEETTEECEEEEEEESSC--------CCHHHHHHHHHGGGGGEE-TTTEE----SSTTCCCHHHHHHTCTTC
T ss_pred             CCCcCccccccCCCCCceEEEeecCC--------CCHHHHHHHHHHHHHhcC-CCCCC----CCCCCchhHHHHHHHHhc
Confidence            4677521       489999877543        136789999999999999 76532    223577999999999999


Q ss_pred             ceEEEEEEEeecCCCeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCCCCCCCCC
Q psy17200         74 RYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVYPHAN  137 (177)
Q Consensus        74 t~VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~~~y~~~~  137 (177)
                      ++||||++.|... ...+++||+|+|.||+.|++.      ++ |+.|+|||.||.+..-.+|.
T Consensus       125 ~~vGCa~~~c~~~-~~~~~~VC~Y~P~GN~~g~~~------~p-Y~~G~pcs~C~~gc~~gLC~  180 (221)
T 1xta_A          125 YRAGCAVSYCPSS-AWSYFYVCQYCPSGNFQGKTA------TP-YKLGPPCGDCPSACDNGLCT  180 (221)
T ss_dssp             CEEEEEEEECTTS-SSSEEEEEEEESCCCCTTTTT------CS-SCBSSTTTTCTTBEETTEEC
T ss_pred             CEeeEEEEEcCCC-CccEEEEEEEeCCcCCCCCcC------CC-cccCCccccCCCCCCCCCCC
Confidence            9999999999533 224799999999999999741      22 68999999999654434454

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=99.94  E-value=7.2e-27  Score=181.93  Aligned_cols=101  Identities=30%  Similarity=0.558  Sum_probs=80.9

Q ss_pred             CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeec
Q psy17200          6 GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVY   85 (177)
Q Consensus         6 ~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~   85 (177)
                      +..+||||+.....       ...+.++|+.||+|+++|+ |..+.+      ...+||||||||+++++||||++.|..
T Consensus        78 ~~~~GeNl~~~~~~-------~~~~~~~v~~W~~E~~~y~-~~~~~~------~~~~gHfTQ~VW~~t~~vGCa~~~c~~  143 (205)
T 3q2u_A           78 FTSLGENIWTGSVP-------IFSVSSAITNWYDEIQDYD-FKTRIC------KKVCGHYTQVVWADSYKVGCAVQFCPK  143 (205)
T ss_dssp             CSSCEEEEEEEETT-------TCCHHHHHHHHHGGGGGEE-TTTTEE------SSCCHHHHHHTCTTCCEEEEEEEEESC
T ss_pred             CCCCceEEEEccCC-------CCCHHHHHHHHHhHHHhcC-CCCCCc------cchhHHHHHHHhhcccEeeeEEEEcCC
Confidence            35799999876543       2357889999999999999 876533      467999999999999999999999954


Q ss_pred             CCC-----eEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCC
Q psy17200         86 NGT-----AVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRR  130 (177)
Q Consensus        86 ~~~-----~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~  130 (177)
                      ...     ...++||+|+|.||+ ++.+         |+.|+|||.||.+
T Consensus       144 ~~g~~~~~~~~~~VC~Y~P~GN~-~~~p---------Y~~G~pcS~C~~g  183 (205)
T 3q2u_A          144 VSGFDALSNGAHFICNYGPGGNY-PTWP---------YKRGATCSACPNN  183 (205)
T ss_dssp             CBTCSSCCSEEEEEEEEESCCCC-SSCS---------SCBSSTTTTCSTT
T ss_pred             CcCcccccccEEEEEEEECCCCc-CCCC---------CCcCcccccCCCC
Confidence            211     257899999999998 5322         6899999999974

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=99.94  E-value=5.4e-27  Score=175.37  Aligned_cols=95  Identities=40%  Similarity=0.724  Sum_probs=78.8

Q ss_pred             CCCCC---CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEE
Q psy17200          1 MKHST---GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLG   77 (177)
Q Consensus         1 ~~hs~---~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VG   77 (177)
                      |.||+   +..+||||+.+..+        ....++|+.||+|.++|+ |..+.+      ...+||||||||++|++||
T Consensus        52 ~~hs~~~~~~~~GeNl~~~~~~--------~~~~~~v~~W~~E~~~y~-~~~~~~------~~~~gHfTQ~VW~~t~~vG  116 (154)
T 4aiw_A           52 LKHSPESSRGQCGENLAWASYD--------QTGKEVADRWYSEIKNYN-FQQPGF------TSGTGHFTAMVWKNTKKMG  116 (154)
T ss_dssp             CCCCHHHHTTSSEEEEEEESSC--------CCHHHHHHHHHGGGGGCC-TTSCSC------CTTTHHHHHHHCTTCCEEE
T ss_pred             ccccccCCCCCCCeeeEecCCC--------CCHHHHHHHHHHHhhhcc-cCCCCc------CCCcCCeeeeehhhhceee
Confidence            56875   56789999876544        346789999999999999 877654      4569999999999999999


Q ss_pred             EEEEEeecCCCeEEEEEEEeeCCCccCCc--cccccCC
Q psy17200         78 FGISRYVYNGTAVYIVVCNYDPAGNVVGL--YASNVLK  113 (177)
Q Consensus        78 Ca~~~c~~~~~~~~~vVC~Y~p~GN~~g~--~~~nv~~  113 (177)
                      ||++.|. ++.  .++||+|.|+||+.|+  |.+||+|
T Consensus       117 Cg~a~c~-~~~--~~vVC~Y~P~GN~~g~~~y~~NV~p  151 (154)
T 4aiw_A          117 VGKASAS-DGS--SFVVARYFPAGNVVNEGFFEENVLP  151 (154)
T ss_dssp             EEEEECT-TSC--EEEEEEEESCCCCCSTTHHHHHSCC
T ss_pred             eEEEEcC-CCC--EEEEEEEeCCCccCCccchHHhCCC
Confidence            9999994 333  6899999999999876  8889964

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=99.94  E-value=1.8e-26  Score=183.10  Aligned_cols=110  Identities=15%  Similarity=0.183  Sum_probs=82.4

Q ss_pred             CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecC
Q psy17200          7 TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYN   86 (177)
Q Consensus         7 ~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~   86 (177)
                      +.+|||++...+.  ...+....+.++|+.||+|+++|+ +.....+.....+..+||||||||++|++||||++.|..+
T Consensus       102 ~~~Gen~~~~~~~--~~~~~~~~~~~av~~W~~E~~~y~-~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~  178 (233)
T 3u3l_C          102 WLPGQLNFKYSGD--KLPRIKELIDDAVKKGHLQKHNIT-REIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDG  178 (233)
T ss_dssp             SSCEEEEEEEEES--SCCCHHHHHHHHHHHHHGGGGTCC-HHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEET
T ss_pred             CcCeEEEEEecCC--CCCCHHHHHHHHHHHHHHHHhhhC-HHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcC
Confidence            3689988755443  113456678999999999999998 5421111222235789999999999999999999999654


Q ss_pred             CCeEEEEEEEeeCCCccCCccccccCCCCCCcCCC-CCCCCCCCC
Q psy17200         87 GTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEG-PPEVFCPRR  130 (177)
Q Consensus        87 ~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G-~pcs~C~~~  130 (177)
                      +...++|||+|+| ||+.|+.+         |+.| .|||.| .+
T Consensus       179 ~~~~~~~VC~Y~p-GN~~g~~~---------Y~~G~~pcs~C-~g  212 (233)
T 3u3l_C          179 AKARALLTCNFSS-QNTRGRPV---------YKIGNSPGEKC-IE  212 (233)
T ss_dssp             TEEEEEEEEEESC-CCCTTSCS---------SCBCSSTTTTC-SS
T ss_pred             CeeEEEEEEECCC-CCCCCCce---------eeCCCCccccC-CC
Confidence            4346899999998 99999643         6789 999999 44

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.92  E-value=9.9e-25  Score=186.31  Aligned_cols=114  Identities=30%  Similarity=0.541  Sum_probs=89.0

Q ss_pred             CCCCC---CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCC---CCCCcccchhhhhhhhccc
Q psy17200          1 MKHST---GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINT---DTSRFCIGHFTQLVWRDSR   74 (177)
Q Consensus         1 ~~hs~---~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~---~~~~~~~ghfTQmvW~~tt   74 (177)
                      +.|++   +..+||||++....   ..+....+.++|+.||+|+++|+ +.....+..   ...+..++|||||||++++
T Consensus       293 ~~h~~~~~~~~~GeNl~~~~~~---~~~~~~~~~~~v~~W~~E~~~y~-~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~  368 (424)
T 3nt8_A          293 YQHSHGEDRPGLGENIYKTSVL---KFDKNKAAKQASQLWWNELKEYG-VGPSNVLTTALWNRPNMQIGHYTQMAWDTTY  368 (424)
T ss_dssp             SSCCCTTTSTTCEEEEEEESST---TCCHHHHHHHHHHHHHTHHHHTC-CCTTCBCCHHHHTCTTCCCHHHHHHHCTTCC
T ss_pred             ccCCCccccCccceeEEecccC---CCchHHHHHHHHHHHHHHHHhcC-CCCCcccccccccCCCCcccchHHHhhhhcc
Confidence            46876   35799999877543   23345688999999999999999 765432221   1125689999999999999


Q ss_pred             eEEEEEEEeecCCCeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCCC
Q psy17200         75 YLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRT  131 (177)
Q Consensus        75 ~VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~~  131 (177)
                      +||||++.|. .+   .++||+|+|+||+.|+++         |+.|+|||.|+.+.
T Consensus       369 ~vGCa~~~c~-~~---~~~VC~Y~p~GN~~g~~~---------Y~~G~pcs~C~~g~  412 (424)
T 3nt8_A          369 KLGCAVVFCN-DF---TFGVCQYGPGGNYMGHVI---------YTMGQPCSQCSPGA  412 (424)
T ss_dssp             EEEEEEEECS-SS---EEEEEEEESCCCCTTSBS---------SCBSSTTTTCCTTC
T ss_pred             eeeeEEEEeC-CC---eEEEEEecCCCCcCCCCC---------CCCCcccccCCcCC
Confidence            9999999994 22   599999999999999754         78999999999653

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=99.90  E-value=2.6e-24  Score=157.41  Aligned_cols=89  Identities=40%  Similarity=0.654  Sum_probs=72.4

Q ss_pred             CCCCCCCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEE
Q psy17200          1 MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGI   80 (177)
Q Consensus         1 ~~hs~~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~   80 (177)
                      |.||++   ||||+++. .       ...+.++|+.|++|.++|+ |..+.+    ..+..+||||||||+++++||||+
T Consensus        46 ~~hs~~---GENla~~~-~-------~~~~~~~v~~W~~E~~~y~-~~~~~~----~~~~~~gHfTQ~vW~~t~~vGCa~  109 (135)
T 1cfe_A           46 LIHSGA---GENLAKGG-G-------DFTGRAAVQLWVSERPSYN-YATNQC----VGGKKCRHYTQVVWRNSVRLGCGR  109 (135)
T ss_dssp             SCSCSS---SBCCEECS-S-------SCCHHHHHHHHHTTGGGEE-GGGTEE----CSSSCCSSHHHHHCTTCCEEEEEE
T ss_pred             cccCCC---CeEEEEec-C-------CCCHHHHHHHHHhHHhhCC-CCCCCc----CCCCcccceeeeEEccCcEEeEEE
Confidence            568875   99998665 2       1357899999999999999 776533    235679999999999999999999


Q ss_pred             EEeecCCCeEEEEEEEeeCCCccCCccc
Q psy17200         81 SRYVYNGTAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        81 ~~c~~~~~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                      +.|. ++  .+++||+|+|+||+.|+++
T Consensus       110 ~~c~-~~--~~~~VC~Y~p~GN~~g~~p  134 (135)
T 1cfe_A          110 ARCN-NG--WWFISCNYDPVGNWIGQRP  134 (135)
T ss_dssp             EECT-TS--SEEEEEECSSCCSCTTSCC
T ss_pred             EEeC-CC--CEEEEEEEeCCCCCCCCCC
Confidence            9994 33  3799999999999999753

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=99.89  E-value=1.1e-23  Score=165.49  Aligned_cols=105  Identities=26%  Similarity=0.507  Sum_probs=76.1

Q ss_pred             CCCCC-----CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCC--CCcccchhhhhhhhcc
Q psy17200          1 MKHST-----GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDT--SRFCIGHFTQLVWRDS   73 (177)
Q Consensus         1 ~~hs~-----~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~--~~~~~ghfTQmvW~~t   73 (177)
                      |.||+     +..+||||++.+...   . ....+.++|+.||+|+++|+ +.....+. ..  ....+||||||||++|
T Consensus        98 ~~Hs~c~~~~~~~~GeNl~~~~~~~---~-~~~~~~~av~~W~~E~~~y~-~~~~~~~~-~~~~~~~~~gHfTQ~VW~~t  171 (218)
T 2vzn_A           98 FEHDACRNVERFAVGQNIAATSSSG---K-NKSTPNEMILLWYNEVKDFD-NRWISSFP-SDDNILMKVGHYTQIVWAKT  171 (218)
T ss_dssp             SSCCSCCCCSSSCCEEEEEEEEECC-----CCCCHHHHHHHHHGGGGGCC-GGGSSSCC-CCHHHHHHHHHHHHHTCTTC
T ss_pred             cCCCCCCCCccCCCceEEEEEeccC---C-ccchHHHHHHHHHHHHHhcC-cccccCCC-CCcccCCCcchHHHHHHHhc
Confidence            46776     223899997765541   1 11245599999999999999 76321111 11  1356899999999999


Q ss_pred             ceEEEEEEEeec-CCCeEEEEEEEeeCCCccCCcccccc
Q psy17200         74 RYLGFGISRYVY-NGTAVYIVVCNYDPAGNVVGLYASNV  111 (177)
Q Consensus        74 t~VGCa~~~c~~-~~~~~~~vVC~Y~p~GN~~g~~~~nv  111 (177)
                      ++||||++.|.. ++...++|||+|+|.||+.|++++++
T Consensus       172 ~~vGCa~~~c~~~~~~~~~~vVC~Y~P~GN~~g~~~y~~  210 (218)
T 2vzn_A          172 TKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIYEI  210 (218)
T ss_dssp             CEEEEEEEEEECTTSCEEEEEEEEEESCCCCTTSCSSCB
T ss_pred             CEEeEEEEEEeCCCCeEEEEEEEEECCCCCCCCCccccc
Confidence            999999999964 23335799999999999999887554

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=99.88  E-value=1e-22  Score=159.00  Aligned_cols=100  Identities=27%  Similarity=0.454  Sum_probs=74.6

Q ss_pred             CCCCC-----CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccce
Q psy17200          1 MKHST-----GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRY   75 (177)
Q Consensus         1 ~~hs~-----~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~   75 (177)
                      +.|+.     ...+||||++.+...    .....+.++|+.||+|+++|+ +... + .. .....+||||||||++|++
T Consensus       101 ~~h~~~~~~~~~~~GeNl~~~~~~~----~~~~~~~~av~~W~~E~~~y~-~~~~-~-~~-~~~~~~gHfTQ~VW~~t~~  172 (209)
T 1qnx_A          101 YGHDTCRDVAKYQVGQNVALTGSTA----AKYDDPVKLVKMWEDEVKDYN-PKKK-F-SG-NDFLKTGHYTQMVWANTKE  172 (209)
T ss_dssp             CSCCSCCCCSSSCCEEEEEEEEESS----SCCCCHHHHHHHHHGGGGGCC-TTSC-G-GG-SCHHHHHHHHHHTCTTCCE
T ss_pred             ccCCCccCCCCCCCccEEEEecccC----CCcccHHHHHHHHHHhhhhcC-CccC-C-CC-CCCCcccchhhhhhhcCcE
Confidence            46775     123899997665431    112356789999999999999 7642 2 11 1235799999999999999


Q ss_pred             EEEEEEEeecCCCeEEEEEEEeeCCCccCCccc
Q psy17200         76 LGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        76 VGCa~~~c~~~~~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                      ||||++.|..++...++|||+|+|.||+.|+.+
T Consensus       173 vGCa~~~c~~~~~~~~~~VC~Y~P~GN~~g~~~  205 (209)
T 1qnx_A          173 VGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEEL  205 (209)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEESCCCCTTSCS
T ss_pred             eeeEEEEEeCCCceeEEEEEEeCCCCCCCCCCC
Confidence            999999996544335789999999999999654

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.87  E-value=1.6e-22  Score=157.50  Aligned_cols=122  Identities=15%  Similarity=0.037  Sum_probs=67.0

Q ss_pred             ccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeec--CC
Q psy17200         10 GENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVY--NG   87 (177)
Q Consensus        10 GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~--~~   87 (177)
                      ||||+...+.   .......+.++|+.||+|                    .++|||||||++|++||||++.|..  .+
T Consensus        74 GeNl~~~sg~---~~~~~~~~~~av~~W~~E--------------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~  130 (206)
T 3s6s_A           74 HRGVTRFSGD---YEGSAISALKEILETFSA--------------------DKNSMRQVVYPKATRFGCSGRLRRNKKTG  130 (206)
T ss_dssp             TCEEEEEEEE---CSSCHHHHHHHHHHHHTT--------------------CHHHHHHHHCTTCCEEEEEEEECC-----
T ss_pred             CcEEEEecCC---CCccchhHHHHHHHHHhh--------------------hhhhHHHHHHHhhceeeEEEEEecCcCCC
Confidence            9999654432   112223356999999988                    3689999999999999999999942  12


Q ss_pred             CeEEEEEEEeeCCCccCCccccccCCCCCCcCCCCCCCCCCCCCCC--CCCCCCC---CCCceeeCCCCCceeecceEEE
Q psy17200         88 TAVYIVVCNYDPAGNVVGLYASNVLKEGDWDDEGPPEVFCPRRTVY--PHANDTQ---PPETYFHDDDGNIIDLEGNVYV  162 (177)
Q Consensus        88 ~~~~~vVC~Y~p~GN~~g~~~~nv~~~~~yy~~G~pcs~C~~~~~y--~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~  162 (177)
                      ...++|||+|+|+|  .|+.+         |+.|+|||.|++++++  ..|.+..   |-....-.+.--|.+++-+..+
T Consensus       131 ~~~~~vVCnY~p~G--~g~~~---------Y~~G~pCS~~s~C~t~~~~~C~~gLC~~~~~~~~~~~~~~~~~~~~~~~~  199 (206)
T 3s6s_A          131 MRRMDWVCVYDKKP--KDGES---------FEGGKPCNENKDCTYYKGSTCEWNLCYTFFAAASFLEQKLISEEDLNSAV  199 (206)
T ss_dssp             --EEEEEEEESCCC--CTTCC---------CCCSCCCSSGGGCCSSTTCEECSSCEECSCCC------------------
T ss_pred             CceEEEEEEeCCCC--CCCCC---------cccCCCCCCCCCCCCCCCCcCCCCCCCCccchhhHHHHHhccHhhhhhhh
Confidence            22589999999977  67532         6899999875444332  2233211   2222211122235556666666


Q ss_pred             ech
Q psy17200        163 DTA  165 (177)
Q Consensus       163 ~~~  165 (177)
                      |-|
T Consensus       200 ~~~  202 (206)
T 3s6s_A          200 DHH  202 (206)
T ss_dssp             ---
T ss_pred             hcc
Confidence            655

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=95.61  E-value=0.0019  Score=50.30  Aligned_cols=50  Identities=8%  Similarity=0.064  Sum_probs=32.2

Q ss_pred             CCCCCCCCCCCCCCCCCceee-CCCCCceeecceEEEechhhhHhhhhcCC
Q psy17200        127 CPRRTVYPHANDTQPPETYFH-DDDGNIIDLEGNVYVDTARYYLQRRANGQ  176 (177)
Q Consensus       127 C~~~~~y~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (177)
                      |+.+..=-+|+.+.....+-+ ...-.|+++.|+.+||.||.||++||+|+
T Consensus         9 C~~~~~hi~C~~~~~~~~C~~~~~~~~~s~~~~~~il~~HN~~R~~va~G~   59 (233)
T 3u3l_C            9 CRGDNYHVGCGEPAYAQECGQSPRTRELLKEHRNEILSKINDVRDHVAKGS   59 (233)
T ss_dssp             CTTCCCBTTSSCCCCCGGGTTCCEECCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCccccCCCCCCcccCCCCceecCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            665555556754421111100 00125778899999999999999999995

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=95.13  E-value=0.0012  Score=50.61  Aligned_cols=48  Identities=13%  Similarity=0.103  Sum_probs=31.7

Q ss_pred             CCCCCCCCCCCCCCCCCceeeC---CCCCceeecceEEEechhhhHhhhhcC
Q psy17200        127 CPRRTVYPHANDTQPPETYFHD---DDGNIIDLEGNVYVDTARYYLQRRANG  175 (177)
Q Consensus       127 C~~~~~y~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (177)
                      |+.+..=-+|+.+ .-...|+.   ....|+++.++.+||.||.||++||.|
T Consensus        13 C~~~~~H~~C~~~-~~~~~C~~~~~~~~~l~~~~~~~iL~~HN~~R~~~a~G   63 (209)
T 1qnx_A           13 CLKGGVHTACKYG-SLKPNCGNKVVVSYGLTKQEKQDILKEHNDFRQKIARG   63 (209)
T ss_dssp             CTTCCCCHHHHCC-CCSCCCSSCEEEEESCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCcccCCCC-CCCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            6654444445433 11223443   122678889999999999999999988

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=95.06  E-value=0.029  Score=46.30  Aligned_cols=43  Identities=30%  Similarity=0.424  Sum_probs=34.4

Q ss_pred             CcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEE
Q psy17200          8 KLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGIS   81 (177)
Q Consensus         8 ~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~   81 (177)
                      .+||||+.+..+          ...+++.|++                     ..||..+|+|...++||+|+.
T Consensus       286 ~~GENIA~G~~s----------~~~av~~Wmn---------------------SpGHr~NIL~~~~t~iGvGv~  328 (339)
T 4ifa_A          286 LAGENIAAQHSD----------GVAALQGWLN---------------------SEGHRKNLLNEQFTGLGVGVY  328 (339)
T ss_dssp             EEEEEEEESCSS----------HHHHHHHHHT---------------------SHHHHHHHTCTTCCEEEEEEE
T ss_pred             ceeEEEEEeCCC----------HHHHHHHHhC---------------------CHhHHHHHhCCCCCEEEEEEE
Confidence            479999865432          5688999963                     138999999999999999986

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=93.85  E-value=0.005  Score=47.41  Aligned_cols=26  Identities=27%  Similarity=0.286  Sum_probs=23.4

Q ss_pred             CCceeecceEEEechhhhHhhhhcCC
Q psy17200        151 GNIIDLEGNVYVDTARYYLQRRANGQ  176 (177)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (177)
                      ..|+++.++.+||.||.||++||.|+
T Consensus        36 ~~~t~~~~~~iL~~HN~~R~~~a~G~   61 (218)
T 2vzn_A           36 VGFTDAEKDAIVNKHNELRQRVASGK   61 (218)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            37888999999999999999999884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	3e-18
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	3e-14
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	2e-11
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	3e-09

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 76.1 bits (186), Expect = 3e-18
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 1   MKHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRF 60
            +     ++G+N+  T S      DP       V  W  E+  YN    P    +     
Sbjct: 106 CRDVAKYQVGQNVALTGSTAAKYDDP----VKLVKMWEDEVKDYN----PKKKFSGNDFL 157

Query: 61  CIGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVG 105
             GH+TQ+VW +++ +G G  +Y+      + +VCNY P+GN   
Sbjct: 158 KTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKN 202

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 64.9 bits (157), Expect = 3e-14
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 14/112 (12%)

Query: 2   KHSTGTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFC 61
           +   G K GEN++ +               D + +W+ E   +        +  D     
Sbjct: 66  RVIEGIKCGENIYMSPYPMK--------WTDIIHAWHDEYKDFKY-----GVGADPPNAV 112

Query: 62  IGHFTQLVWRDSRYLGFGISRYVYNGTAVYIVVCNYDPAGNVVGLYASNVLK 113
            GH+TQ+VW  S  +G   +    +    Y  VC Y PAGN +G  A+    
Sbjct: 113 TGHYTQIVWYKSYRIGCAAAYC-PSSPYSYFFVCQYCPAGNFIGKTATPYTS 163

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 2e-11
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 12/86 (13%)

Query: 30  VEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTA 89
            ++  D WYSEI  YN      T  T       GHFT +VW++++ +G G +        
Sbjct: 73  GKEVADRWYSEIKNYNFQQPGFTSGT-------GHFTAMVWKNTKKMGVGKASASDGS-- 123

Query: 90  VYIVVCNYDPAGNVVG--LYASNVLK 113
              VV  Y PAGNVV    +  NVL 
Sbjct: 124 -SFVVARYFPAGNVVNEGFFEENVLP 148

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score = 50.6 bits (120), Expect = 3e-09
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 30  VEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYNGTA 89
              AV  W SE  +YN   N              H+TQ+VWR+S  LG G +R       
Sbjct: 64  GRAAVQLWVSERPSYNYATNQCVGGKKCR-----HYTQVVWRNSVRLGCGRARCNNGW-- 116

Query: 90  VYIVVCNYDPAGNVVG 105
            + + CNYDP GN +G
Sbjct: 117 -WFISCNYDPVGNWIG 131

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	99.89
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	99.89
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	99.87
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	99.86
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	96.67

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=99.89  E-value=3.5e-24  Score=154.89  Aligned_cols=86  Identities=41%  Similarity=0.668  Sum_probs=70.1

Q ss_pred             CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecC
Q psy17200          7 TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYN   86 (177)
Q Consensus         7 ~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~   86 (177)
                      .++||||+.+...        ..+.++|+.||+|.++|+ |..+..    .....++|||||||++|++||||++.|. +
T Consensus        49 ~~~GeNi~~~~~~--------~~~~~av~~W~~E~~~y~-~~~~~~----~~~~~~ghftQmvW~~t~~vGCa~~~c~-~  114 (135)
T d1cfea_          49 SGAGENLAKGGGD--------FTGRAAVQLWVSERPSYN-YATNQC----VGGKKCRHYTQVVWRNSVRLGCGRARCN-N  114 (135)
T ss_dssp             CSSSBCCEECSSS--------CCHHHHHHHHHTTGGGEE-GGGTEE----CSSSCCSSHHHHHCTTCCEEEEEEEECT-T
T ss_pred             CccccceeccCCC--------CCHHHHHHHHHhhccccc-cccccC----CCCcccchhheeeehhheEeeEEEEEEC-C
Confidence            4689999876543        346899999999999999 765433    2356789999999999999999999994 3


Q ss_pred             CCeEEEEEEEeeCCCccCCccc
Q psy17200         87 GTAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        87 ~~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                      +.  ++|||+|+|+||+.|+++
T Consensus       115 ~~--~~vVC~Y~P~GN~~g~~p  134 (135)
T d1cfea_         115 GW--WFISCNYDPVGNWIGQRP  134 (135)
T ss_dssp             SS--EEEEEECSSCCSCTTSCC
T ss_pred             CC--EEEEEEEeCCCCcCCcCC
Confidence            33  689999999999999754

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.2e-23  Score=152.63  Aligned_cols=95  Identities=40%  Similarity=0.724  Sum_probs=76.4

Q ss_pred             CCCCC---CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEE
Q psy17200          1 MKHST---GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLG   77 (177)
Q Consensus         1 ~~hs~---~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VG   77 (177)
                      +.|++   ...+||||+....+        ..+.++|+.||+|.++|+ |..+.+      ...++|||||||+++++||
T Consensus        49 ~~h~~~~~~~~~geni~~~~~~--------~~~~~~v~~W~~e~~~y~-~~~~~~------~~~~ghftqmvw~~t~~vG  113 (149)
T d1smba_          49 LKHSPESSRGQCGENLAWASYD--------QTGKEVADRWYSEIKNYN-FQQPGF------TSGTGHFTAMVWKNTKKMG  113 (149)
T ss_dssp             CCCCHHHHTTSSEEEEEEESSC--------CCHHHHHHHHHGGGGGCC-TTSCCC------CGGGHHHHHHHCTTCCEEE
T ss_pred             ccccccccccccCceeeecCCC--------ccHHHHHHHHHHHHhhcc-cCCCCc------ccccchhhheecCCceEee
Confidence            45765   45689999866543        346788999999999999 876654      5678999999999999999


Q ss_pred             EEEEEeecCCCeEEEEEEEeeCCCccCCc--cccccCC
Q psy17200         78 FGISRYVYNGTAVYIVVCNYDPAGNVVGL--YASNVLK  113 (177)
Q Consensus        78 Ca~~~c~~~~~~~~~vVC~Y~p~GN~~g~--~~~nv~~  113 (177)
                      ||++.|. ++.  .++||+|+|+||+.|+  +.+||+|
T Consensus       114 Cg~a~c~-~~~--~~~VC~Y~p~GN~~~~~~y~~nv~~  148 (149)
T d1smba_         114 VGKASAS-DGS--SFVVARYFPAGNVVNEGFFEENVLP  148 (149)
T ss_dssp             EEEEECT-TSC--EEEEEEEESCCCCCSTTHHHHHSCC
T ss_pred             EEEEEcC-CCC--EEEEEEeeCCCCcCCcccchhcCCC
Confidence            9999993 333  5789999999999876  6777753

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=99.87  E-value=1.1e-22  Score=151.15  Aligned_cols=88  Identities=31%  Similarity=0.573  Sum_probs=70.3

Q ss_pred             CCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeecC
Q psy17200          7 TKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVYN   86 (177)
Q Consensus         7 ~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~~   86 (177)
                      ..+|||++.....        ..+.++|+.||+|+++|+ |.....    ..+..++|||||||+++++||||++.|...
T Consensus        71 ~~~g~n~~~~~~~--------~~~~~~v~~W~~E~~~~~-~~~~~~----~~~~~~ghftqmvW~~t~~vGCa~~~c~~~  137 (164)
T d1rc9a1          71 IKCGENIYMSPYP--------MKWTDIIHAWHDEYKDFK-YGVGAD----PPNAVTGHYTQIVWYKSYRIGCAAAYCPSS  137 (164)
T ss_dssp             EECEEEEEEESSC--------CCHHHHHHHHHGGGGGEE-TTTEES----STTCCCHHHHHHTCTTCCEEEEEEEECTTS
T ss_pred             cccceEEEEecCC--------CCHHHHHHHHhhhhheee-cCCCCC----CCcchhhHHHHHhhhcccEEeEEEEEeCCC
Confidence            4579999765543        347789999999999999 765422    335678999999999999999999999543


Q ss_pred             CCeEEEEEEEeeCCCccCCccc
Q psy17200         87 GTAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        87 ~~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                      +. .++|||+|+|+||+.|++.
T Consensus       138 ~~-~~~vVC~Y~P~GN~~g~~~  158 (164)
T d1rc9a1         138 PY-SYFFVCQYCPAGNFIGKTA  158 (164)
T ss_dssp             SS-SEEEEEEEESCCCCTTCTT
T ss_pred             Cc-eEEEEEEEcCCCccCCCcC
Confidence            32 4688999999999999864

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=99.86  E-value=4.5e-22  Score=153.08  Aligned_cols=95  Identities=26%  Similarity=0.449  Sum_probs=73.8

Q ss_pred             CCCcccEEEEEeCCCCCCCChhhHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCcccchhhhhhhhccceEEEEEEEeec
Q psy17200          6 GTKLGENLFKTASDDHLIKDPVKVVEDAVDSWYSEISTYNDYGNPDTINTDTSRFCIGHFTQLVWRDSRYLGFGISRYVY   85 (177)
Q Consensus         6 ~~~~GqNi~~~~~~~~~~~~~~~~~~~av~~W~~E~~~~~~~~~~~~~~~~~~~~~~ghfTQmvW~~tt~VGCa~~~c~~   85 (177)
                      ...+|||+++....    ......+.++|+.||+|+++|+ +.....   ......++|||||||+++++||||++.|..
T Consensus       111 ~~~~Gen~~~~~~~----~~~~~~~~~~v~~W~~E~~~~~-~~~~~~---~~~~~~~ghftQmvw~~t~~VGCa~~~c~~  182 (209)
T d1qnxa_         111 KYQVGQNVALTGST----AAKYDDPVKLVKMWEDEVKDYN-PKKKFS---GNDFLKTGHYTQMVWANTKEVGCGSIKYIQ  182 (209)
T ss_dssp             SSCCEEEEEEEEES----SSCCCCHHHHHHHHHGGGGGCC-TTSCGG---GSCHHHHHHHHHHTCTTCCEEEEEEEEEEE
T ss_pred             CCCCcceeeecccC----CcCcccHHHHHHHHHHHhhhcC-CCcccc---cCCccccchhHHHhhhhhCEEeEEEEEEcC
Confidence            34589999766544    1223457789999999999999 654321   123457999999999999999999999976


Q ss_pred             CCCeEEEEEEEeeCCCccCCccc
Q psy17200         86 NGTAVYIVVCNYDPAGNVVGLYA  108 (177)
Q Consensus        86 ~~~~~~~vVC~Y~p~GN~~g~~~  108 (177)
                      .+...++|||+|+|+||+.|+.+
T Consensus       183 ~~~~~~~vVC~Y~p~GN~~g~~~  205 (209)
T d1qnxa_         183 EKWHKHYLVCNYGPSGNFKNEEL  205 (209)
T ss_dssp             TTEEEEEEEEEEESCCCCTTSCS
T ss_pred             CCCCEEEEEEEECCCCCCCCCCC
Confidence            65556899999999999999654

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=96.67  E-value=4.7e-05  Score=56.46  Aligned_cols=25  Identities=16%  Similarity=0.183  Sum_probs=23.5

Q ss_pred             CceeecceEEEechhhhHhhhhcCC
Q psy17200        152 NIIDLEGNVYVDTARYYLQRRANGQ  176 (177)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~  176 (177)
                      +|+++.|+.+||.||.||++||+|+
T Consensus        40 ~~t~~~r~~iL~~HN~~R~~vA~G~   64 (209)
T d1qnxa_          40 GLTKQEKQDILKEHNDFRQKIARGL   64 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhccc
Confidence            6789999999999999999999995