Psyllid ID: psy17244

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MNKVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Secondary Structure (PSIPRED)
ccHHHHHHHcccccccccccccccccccccccEEEEEEccccEEcccccccccccccccccccEEEEEEEccEEEEEEEEEcccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHcccccEEEEEccccccccccccEEEEccccccccccEEEEEccccccccccccEEEccccccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEccccccccccccccccccccccccEEEEEEcccHEEEEcccccccccccccccccEEEEEEEccEEEEEEEEEcccHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHccccccEEEEEEEEHcccccccccHHcHHHHcccHccEEEEEccccHEEEccccccEEccccccccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MNKVYIAQHQavkyeifplsplsrhrlsIVKRKVLVLDLDetlihshhdgitrptvkpgtppdfvlkvtidrhpvrffvhkrphvdFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRqhctpelgsytkdlsaispdlssifildnspgayrgfpdnaipikswfsdpsdTALLALLPVLDALR
Flexible Loop (DISEMBL)
mnkvyiaqhqavkyeifplsplsrhrLSIVKRKVLVLDLDETLIhshhdgitrptvkpgtpPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYyrqhctpelgsytkDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Low Complexity Region (SEG)
MNKVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDArrhilrrryyrQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTallallpvldalR
Disordered region (IsUnstruct)
***VYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVL****
Disordered Region (DISOPRED)
**KVYI*QHQAVKY***************VK*KVLVLDLDETLIHSHHDG*****VKP*TPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Disordered Region (DISEMBL)
MNKVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Disordered Region (DISPRO)
MNKVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNKVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q1RMV9	244	CTD nuclear envelope phos	yes	N/A	0.974	0.782	0.816	1e-89
Q3B7T6	244	CTD nuclear envelope phos	yes	N/A	0.974	0.782	0.816	1e-89
Q3TP92	244	CTD nuclear envelope phos	yes	N/A	0.974	0.782	0.816	1e-89
O95476	244	CTD nuclear envelope phos	yes	N/A	0.974	0.782	0.811	3e-89
Q9VRG7	243	CTD nuclear envelope phos	yes	N/A	0.964	0.777	0.820	4e-89
Q29I63	243	CTD nuclear envelope phos	yes	N/A	0.964	0.777	0.820	5e-89
Q5U395	245	CTD nuclear envelope phos	yes	N/A	0.974	0.779	0.811	6e-89
Q28HW9	244	CTD nuclear envelope phos	yes	N/A	0.974	0.782	0.811	7e-89
Q8JIL9	244	CTD nuclear envelope phos	N/A	N/A	0.974	0.782	0.806	2e-88
Q5U3T3	245	CTD nuclear envelope phos	yes	N/A	0.974	0.779	0.790	2e-86

>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2 SV=1

 Score =  328 bits (842), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/191 (81%), Positives = 173/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           + Q+Q V+Y+I PLSP+SR+RLS VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  VIQYQTVRYDILPLSPVSRNRLSQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R IL+R
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase forming with CNEP1R1 an active phosphatase complex that dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6

>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1 PE=2 SV=2

 Score =  328 bits (841), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/191 (81%), Positives = 173/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           + Q+Q V+Y+I PLSPLSR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  VIQYQTVRYDILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R IL+R
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase forming with CNEP1R1 an active phosphatase complex that dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2 SV=2

 Score =  328 bits (841), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/191 (81%), Positives = 173/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           + Q+Q V+Y+I PLSPLSR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  VIQYQTVRYDILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R IL+R
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase forming with CNEP1R1 an active phosphatase complex that dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1 SV=2

 Score =  327 bits (838), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 173/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           + Q+Q V+Y+I PLSP+SR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  VIQYQTVRYDILPLSPVSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R IL+R
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase forming with CNEP1R1 an active phosphatase complex that dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q9VRG7|CNEP1_DROME CTD nuclear envelope phosphatase 1 homolog OS=Drosophila melanogaster GN=l(1)G0269 PE=2 SV=1

 Score =  327 bits (837), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 155/189 (82%), Positives = 174/189 (92%)

Query: 8   QHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLK 67
           Q+Q VKYE+FPLSP+SRHRLS+V+RK LVLDLDETLIHSHH+ + R TVKPGTP DF +K
Sbjct: 36  QYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVK 95

Query: 68  VTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRY 127
           VTIDR+PVRFFVHKRPHVD+FLD+VSQWY+LVVFTASMEIYGAAVADKLD  R+ILRRRY
Sbjct: 96  VTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRY 155

Query: 128 YRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA 187
           YRQHCTP+ GSYTKDLSAI  DL+ IFI+DNSPGAYR FP+NAIPIKSWFSDP DTALL+
Sbjct: 156 YRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLS 215

Query: 188 LLPVLDALR 196
           LLP+LDALR
Sbjct: 216 LLPMLDALR 224

Serine/threonine protein phosphatase that may dephosphorylate and activate lipin-like phosphatases. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q29I63|CNEP1_DROPS CTD nuclear envelope phosphatase 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1

 Score =  326 bits (836), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/189 (82%), Positives = 174/189 (92%)

Query: 8   QHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLK 67
           Q+Q VKYE+FPLSP+SRHRLS+V+RK LVLDLDETLIHSHH+ + R TVKPGTP DF +K
Sbjct: 36  QYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVK 95

Query: 68  VTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRY 127
           VTIDR+PVRFFVHKRPHVD+FLD+VSQWY+LVVFTASMEIYGAAVADKLD  R+ILRRRY
Sbjct: 96  VTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRY 155

Query: 128 YRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA 187
           YRQHCTP+ GSYTKDLSAI  DL+ IFI+DNSPGAYR FP+NAIPIKSWFSDP DTALL+
Sbjct: 156 YRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLS 215

Query: 188 LLPVLDALR 196
           LLP+LDALR
Sbjct: 216 LLPMLDALR 224

Serine/threonine protein phosphatase that may dephosphorylate and activate lipin-like phosphatases. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2 SV=1

 Score =  326 bits (835), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 173/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I Q+Q V+Y+I PLSP+SR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 36  IIQYQTVRYDILPLSPISRNRLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 95

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R IL+R
Sbjct: 96  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKR 155

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT +LGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 156 RYYRQHCTLDLGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 215

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 216 LNLLPMLDALR 226

Serine/threonine protein phosphatase that may dephosphorylate and activate lipins. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1 PE=2 SV=1

 Score =  326 bits (835), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 155/191 (81%), Positives = 172/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I Q+Q V+Y++ PLSP SR+RLS VKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  IIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  R +LRR
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           R+YRQHCT ELGSY KDLS +  DLSS+ ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase that may dephosphorylate and activate lipins. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. Induces neuronal differentiation by antagonizing BMP signaling. Acts both by dephosphorylating BMPR1A and by promoting BMPR2 proteasomal degradation.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1 PE=1 SV=1

 Score =  324 bits (831), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/191 (80%), Positives = 172/191 (90%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I Q+Q V+Y++ PLSP SR+RLS VKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 35  IIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  + +LRR
Sbjct: 95  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKGVLRR 154

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           R+YRQHCT ELGSY KDLS +  DLSS+ ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 214

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 215 LNLLPMLDALR 225

Serine/threonine protein phosphatase that may dephosphorylate and activate lipins. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol (By similarity). Induces neuronal differentiation by antagonizing BMP signaling. Acts both by dephosphorylating BMPR1A and by promoting BMPR2 proteasomal degradation.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2 SV=1

 Score =  318 bits (815), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 151/191 (79%), Positives = 171/191 (89%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I Q+Q V+Y+I  LSP+SR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 36  IIQYQTVRYDILSLSPISRNRLNNVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 95

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD  + IL+R
Sbjct: 96  LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKR 155

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCT + GSY KDLS +  DLSS+ ILDNSPGAYR  PDNAIPIKSWFSDPSDTAL
Sbjct: 156 RYYRQHCTLDSGSYIKDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTAL 215

Query: 186 LALLPVLDALR 196
           L LLP+LDALR
Sbjct: 216 LNLLPMLDALR 226

Serine/threonine protein phosphatase that may dephosphorylate and activate lipins. Lipins are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
307206274	243	Serine/threonine-protein phosphatase dul	0.974	0.786	0.900	1e-96
307167287	243	Serine/threonine-protein phosphatase dul	0.974	0.786	0.900	7e-96
383857491	243	PREDICTED: CTD nuclear envelope phosphat	0.974	0.786	0.884	3e-95
345490394	240	PREDICTED: CTD nuclear envelope phosphat	0.989	0.808	0.876	1e-94
189241120	243	PREDICTED: similar to dullard-like prote	0.974	0.786	0.879	2e-94
332028460	239	Serine/threonine-protein phosphatase dul	0.954	0.782	0.898	4e-94
270013332	237	hypothetical protein TcasGA2_TC011922 [T	0.974	0.805	0.879	4e-94
328779252	233	PREDICTED: CTD nuclear envelope phosphat	0.989	0.832	0.865	1e-93
340723842	286	PREDICTED: CTD nuclear envelope phosphat	0.989	0.678	0.865	2e-93
350406069	243	PREDICTED: CTD nuclear envelope phosphat	0.974	0.786	0.874	2e-93

>gi|307206274|gb|EFN84339.1| Serine/threonine-protein phosphatase dullard-like protein [Harpegnathos saltator]

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 172/191 (90%), Positives = 180/191 (94%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           ++Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDFV
Sbjct: 34  VSQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRPGTPPDFV 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  R ILRR
Sbjct: 94  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDNNRGILRR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCTPE+GSYTKDLSAI  DLSS+FILDNSPGAYR +PDNAIPIKSWFSD  DTAL
Sbjct: 154 RYYRQHCTPEMGSYTKDLSAICSDLSSVFILDNSPGAYRAYPDNAIPIKSWFSDAGDTAL 213

Query: 186 LALLPVLDALR 196
           L+LLPVLDALR
Sbjct: 214 LSLLPVLDALR 224

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167287|gb|EFN60955.1| Serine/threonine-protein phosphatase dullard-like protein [Camponotus floridanus]

 Score =  355 bits (910), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 172/191 (90%), Positives = 179/191 (93%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDFV
Sbjct: 34  ISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRPGTPPDFV 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  R ILRR
Sbjct: 94  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDNNRGILRR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCTPE+GSYTKDLSAI  DLSS+FILDNSPGAYR +P NAIPIKSWFSD  DTAL
Sbjct: 154 RYYRQHCTPEMGSYTKDLSAICSDLSSVFILDNSPGAYRAYPHNAIPIKSWFSDAGDTAL 213

Query: 186 LALLPVLDALR 196
           L+LLPVLDALR
Sbjct: 214 LSLLPVLDALR 224

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857491|ref|XP_003704238.1| PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Megachile rotundata]

 Score =  352 bits (904), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/191 (88%), Positives = 179/191 (93%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I+Q Q VKYE+FPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct: 34  ISQMQPVKYEMFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRPGTPPDFI 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  R ILRR
Sbjct: 94  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDNNRGILRR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCTPE+GSYTKDLSAI  DL+S+FILDNSPGAYR +P NAIPIKSWFSD  DTAL
Sbjct: 154 RYYRQHCTPEMGSYTKDLSAICSDLASVFILDNSPGAYRAYPHNAIPIKSWFSDAGDTAL 213

Query: 186 LALLPVLDALR 196
           L+LLPVLDALR
Sbjct: 214 LSLLPVLDALR 224

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490394|ref|XP_001605483.2| PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Nasonia vitripennis]

 Score =  351 bits (900), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 170/194 (87%), Positives = 179/194 (92%)

Query: 3   KVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPP 62
           K  I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPP
Sbjct: 28  KKQISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRPGTPP 87

Query: 63  DFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHI 122
           DFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  R I
Sbjct: 88  DFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDNNRGI 147

Query: 123 LRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSD 182
           L RRYYRQHCTPE+GSYTKDL+AI  DL+S+FILDNSPGAYR +P NAIPIKSWFSD  D
Sbjct: 148 LSRRYYRQHCTPEMGSYTKDLAAICSDLASVFILDNSPGAYRAYPHNAIPIKSWFSDAGD 207

Query: 183 TALLALLPVLDALR 196
           TALL+LLPVLDALR
Sbjct: 208 TALLSLLPVLDALR 221

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241120|ref|XP_973128.2| PREDICTED: similar to dullard-like protein [Tribolium castaneum]

 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/191 (87%), Positives = 179/191 (93%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I QHQ+VKY++FPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ R TV+PGTPPDFV
Sbjct: 34  IIQHQSVKYDLFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVVRQTVRPGTPPDFV 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDA R IL+R
Sbjct: 94  LKVVIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAGRGILQR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           R+YRQHCTP+LGSYTKDL AI  DLSS+FILDNSPGAYR +PDNAIPIKSWFSDP+D AL
Sbjct: 154 RFYRQHCTPDLGSYTKDLGAICNDLSSVFILDNSPGAYRAYPDNAIPIKSWFSDPTDVAL 213

Query: 186 LALLPVLDALR 196
           L LLPVLDALR
Sbjct: 214 LNLLPVLDALR 224

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028460|gb|EGI68503.1| Serine/threonine-protein phosphatase dullard-like protein [Acromyrmex echinatior]

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 168/187 (89%), Positives = 175/187 (93%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDFV
Sbjct: 34  ISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRPGTPPDFV 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  R ILRR
Sbjct: 94  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDNNRGILRR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCTPE+GSYTKDLSAI  DLSS+FILDNSPGAYR +P NAIPIKSWFSD  DTAL
Sbjct: 154 RYYRQHCTPEMGSYTKDLSAICSDLSSVFILDNSPGAYRAYPHNAIPIKSWFSDAGDTAL 213

Query: 186 LALLPVL 192
           L+LLPVL
Sbjct: 214 LSLLPVL 220

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013332|gb|EFA09780.1| hypothetical protein TcasGA2_TC011922 [Tribolium castaneum]

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 168/191 (87%), Positives = 179/191 (93%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I QHQ+VKY++FPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ R TV+PGTPPDFV
Sbjct: 28  IIQHQSVKYDLFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVVRQTVRPGTPPDFV 87

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDA R IL+R
Sbjct: 88  LKVVIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAGRGILQR 147

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           R+YRQHCTP+LGSYTKDL AI  DLSS+FILDNSPGAYR +PDNAIPIKSWFSDP+D AL
Sbjct: 148 RFYRQHCTPDLGSYTKDLGAICNDLSSVFILDNSPGAYRAYPDNAIPIKSWFSDPTDVAL 207

Query: 186 LALLPVLDALR 196
           L LLPVLDALR
Sbjct: 208 LNLLPVLDALR 218

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779252|ref|XP_391964.4| PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Apis mellifera]

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/194 (86%), Positives = 178/194 (91%)

Query: 3   KVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPP 62
           K  I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+ GTPP
Sbjct: 28  KKQISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRFGTPP 87

Query: 63  DFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHI 122
           DF+LKV IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVA+KLD  R I
Sbjct: 88  DFILKVKIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVAEKLDNNRGI 147

Query: 123 LRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSD 182
           LRRRYYRQHCTPE+GSYTKDLSAI  DL+S+FILDNSPGAYR +P NAIPIKSWFSD  D
Sbjct: 148 LRRRYYRQHCTPEMGSYTKDLSAICSDLASVFILDNSPGAYRAYPHNAIPIKSWFSDAGD 207

Query: 183 TALLALLPVLDALR 196
           TALL+LLPVLDALR
Sbjct: 208 TALLSLLPVLDALR 221

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723842|ref|XP_003400297.1| PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Bombus terrestris]

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 168/194 (86%), Positives = 178/194 (91%)

Query: 3   KVYIAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPP 62
           K  I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+ GTPP
Sbjct: 74  KKQISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRFGTPP 133

Query: 63  DFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHI 122
           DF+LKV IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVA+KLD  R I
Sbjct: 134 DFILKVKIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVAEKLDNNRGI 193

Query: 123 LRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSD 182
           LRRRYYRQHCTPE+GSYTKDLSAI  DL+S+FILDNSPGAYR +P NAIPIKSWFSD  D
Sbjct: 194 LRRRYYRQHCTPEMGSYTKDLSAICSDLASVFILDNSPGAYRAYPHNAIPIKSWFSDAGD 253

Query: 183 TALLALLPVLDALR 196
           TALL+LLPVLDALR
Sbjct: 254 TALLSLLPVLDALR 267

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406069|ref|XP_003487644.1| PREDICTED: CTD nuclear envelope phosphatase 1 homolog [Bombus impatiens]

 Score =  347 bits (889), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 167/191 (87%), Positives = 177/191 (92%)

Query: 6   IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
           I+Q Q VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDG+ RPTV+ GTPPDF+
Sbjct: 34  ISQMQPVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGVARPTVRFGTPPDFI 93

Query: 66  LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRR 125
           LKV IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVA+KLD  R ILRR
Sbjct: 94  LKVKIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVAEKLDNNRGILRR 153

Query: 126 RYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL 185
           RYYRQHCTPE+GSYTKDLSAI  DL+S+FILDNSPGAYR +P NAIPIKSWFSD  DTAL
Sbjct: 154 RYYRQHCTPEMGSYTKDLSAICSDLASVFILDNSPGAYRAYPHNAIPIKSWFSDAGDTAL 213

Query: 186 LALLPVLDALR 196
           L+LLPVLDALR
Sbjct: 214 LSLLPVLDALR 224

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
UNIPROTKB|Q1RMV9	244	CTDNEP1 "CTD nuclear envelope	0.908	0.729	0.769	2.8e-73
UNIPROTKB|F1SFU2	226	F1SFU2 "Uncharacterized protei	0.908	0.787	0.769	2.8e-73
UNIPROTKB|I3LFS0	244	LOC100622241 "Uncharacterized	0.908	0.729	0.769	2.8e-73
MGI|MGI:1914431	244	Ctdnep1 "CTD nuclear envelope	0.908	0.729	0.769	2.8e-73
RGD|1310172	244	Ctdnep1 "CTD nuclear envelope	0.908	0.729	0.769	2.8e-73
UNIPROTKB|I3L4B2	223	CTDNEP1 "CTD nuclear envelope	0.908	0.798	0.764	5.9e-73
UNIPROTKB|O95476	244	CTDNEP1 "CTD nuclear envelope	0.908	0.729	0.764	5.9e-73
UNIPROTKB|E2R6N2	244	CTDNEP1 "Uncharacterized prote	0.908	0.729	0.764	7.5e-73
UNIPROTKB|Q28HW9	244	ctdnep1 "CTD nuclear envelope	0.908	0.729	0.769	7.5e-73
UNIPROTKB|Q8JIL9	244	ctdnep1 "CTD nuclear envelope	0.908	0.729	0.769	7.5e-73

UNIPROTKB|Q1RMV9 CTDNEP1 "CTD nuclear envelope phosphatase 1" [Bos taurus (taxid:9913)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RLS VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPVSRNRLSQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0034504 "protein localization to nucleus" evidence=ISS

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006998 "nuclear envelope organization" evidence=ISS

GO:0005635 "nuclear envelope" evidence=ISS

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SFU2 F1SFU2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RLS VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    17 VIQYQTVRYDILPLSPVSRNRLSQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 76

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    77 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 136

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   137 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 194

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|I3LFS0 LOC100622241 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RLS VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPVSRNRLSQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0016791 "phosphatase activity" evidence=IEA

MGI|MGI:1914431 Ctdnep1 "CTD nuclear envelope phosphatase 1" [Mus musculus (taxid:10090)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSPLSR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005635 "nuclear envelope" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0006470 "protein dephosphorylation" evidence=ISO

GO:0006998 "nuclear envelope organization" evidence=ISO

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0031965 "nuclear membrane" evidence=ISO

GO:0034504 "protein localization to nucleus" evidence=ISO

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=ISO

RGD|1310172 Ctdnep1 "CTD nuclear envelope phosphatase 1" [Rattus norvegicus (taxid:10116)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSPLSR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0003674 "molecular_function" evidence=ND

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISO;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0005635 "nuclear envelope" evidence=ISO;ISS

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO;ISS

GO:0006470 "protein dephosphorylation" evidence=IEA;ISO;ISS

GO:0006998 "nuclear envelope organization" evidence=IEA;ISO;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA;ISO;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA;ISO;ISS

GO:0034504 "protein localization to nucleus" evidence=IEA;ISO;ISS

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=IEA;ISO;ISS

UNIPROTKB|I3L4B2 CTDNEP1 "CTD nuclear envelope phosphatase 1" [Homo sapiens (taxid:9606)]

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 136/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPVSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|O95476 CTDNEP1 "CTD nuclear envelope phosphatase 1" [Homo sapiens (taxid:9606)]

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 136/178 (76%), Positives = 152/178 (85%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RL+ VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPVSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0016021 "integral to membrane" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IDA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IMP

GO:0005635 "nuclear envelope" evidence=IDA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IGI

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=IDA

GO:0034504 "protein localization to nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E2R6N2 CTDNEP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 136/178 (76%), Positives = 151/178 (84%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             + Q+Q V+Y+I PLSP+SR+RL  VKRK+LVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 VIQYQTVRYDILPLSPVSRNRLGQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSSI ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=IEA

GO:0034504 "protein localization to nucleus" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=IEA

GO:0006998 "nuclear envelope organization" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA

UNIPROTKB|Q28HW9 ctdnep1 "CTD nuclear envelope phosphatase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 137/178 (76%), Positives = 151/178 (84%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             I Q+Q V+Y++ PLSP SR+RLS VKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 IIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSS+ ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005635 "nuclear envelope" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0006998 "nuclear envelope organization" evidence=ISS

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=ISS

UNIPROTKB|Q8JIL9 ctdnep1 "CTD nuclear envelope phosphatase 1" [Xenopus laevis (taxid:8355)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 137/178 (76%), Positives = 151/178 (84%)

Query:     6 IAQHQAVKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFV 65
             I Q+Q V+Y++ PLSP SR+RLS VKRKVLVLDLDETLIHSHHDG+ RPTV+PGTPPDF+
Sbjct:    35 IIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFI 94

Query:    66 LKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXX 125
             LKV ID+HPVRFFVHKRPHVDFFL++VSQWYELVVFTASMEIYG+AVADKLD        
Sbjct:    95 LKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKGVLRR 154

Query:   126 XXXXQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
                 QHCT ELGSY KDLS +  DLSS+ ILDNSPGAYR  PDNAIPIKSWFSDPSDT
Sbjct:   155 RFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDT 212

GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS

GO:0005635 "nuclear envelope" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISS

GO:0006470 "protein dephosphorylation" evidence=ISS

GO:0006998 "nuclear envelope organization" evidence=ISS

GO:0010867 "positive regulation of triglyceride biosynthetic process" evidence=ISS

GO:0031965 "nuclear membrane" evidence=ISS

GO:0071595 "Nem1-Spo7 phosphatase complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29I63	CNEP1_DROPS	3, ., 1, ., 3, ., 1, 6	0.8201	0.9642	0.7777	yes	N/A
Q5U395	CNEPA_DANRE	3, ., 1, ., 3, ., 1, 6	0.8115	0.9744	0.7795	yes	N/A
Q8JIL9	CNEP1_XENLA	3, ., 1, ., 3, ., 1, 6	0.8062	0.9744	0.7827	N/A	N/A
O95476	CNEP1_HUMAN	3, ., 1, ., 3, ., 1, 6	0.8115	0.9744	0.7827	yes	N/A
Q3B7T6	CNEP1_RAT	3, ., 1, ., 3, ., 1, 6	0.8167	0.9744	0.7827	yes	N/A
Q3TP92	CNEP1_MOUSE	3, ., 1, ., 3, ., 1, 6	0.8167	0.9744	0.7827	yes	N/A
Q5U3T3	CNEPB_DANRE	3, ., 1, ., 3, ., 1, 6	0.7905	0.9744	0.7795	yes	N/A
Q28HW9	CNEP1_XENTR	3, ., 1, ., 3, ., 1, 6	0.8115	0.9744	0.7827	yes	N/A
Q61C05	CNEP1_CAEBR	3, ., 1, ., 3, ., 1, 6	0.7397	0.9897	0.7886	N/A	N/A
Q20432	CNEP1_CAEEL	3, ., 1, ., 3, ., 1, 6	0.7434	0.9693	0.7723	yes	N/A
Q1RMV9	CNEP1_BOVIN	3, ., 1, ., 3, ., 1, 6	0.8167	0.9744	0.7827	yes	N/A
Q9VRG7	CNEP1_DROME	3, ., 1, ., 3, ., 1, 6	0.8201	0.9642	0.7777	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3.16	0.991
3rd Layer	3.1.3	0.976

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	196
TIGR02251	162	TIGR02251, HIF-SF_euk, Dullard-like phosphatase do	3e-79
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	2e-65
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	2e-54
COG5190	390	COG5190, FCP1, TFIIF-interacting CTD phosphatases,	2e-38
TIGR02250	156	TIGR02250, FCP1_euk, FCP1-like phosphatase, phosph	6e-11

>gnl|CDD|233801 TIGR02251, HIF-SF_euk, Dullard-like phosphatase domain

 Score =  232 bits (595), Expect = 3e-79
 Identities = 86/165 (52%), Positives = 105/165 (63%), Gaps = 7/165 (4%)

Query: 32  RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDI 91
           +K LVLDLDETL+HS           P    DF + V ID   +  +V KRPHVD FL+ 
Sbjct: 1   KKTLVLDLDETLVHST-------FKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLER 53

Query: 92  VSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLS 151
           VS+WYELV+FTAS+E Y   V D LD    ++ RR YR+ C    G Y KDLS +  DLS
Sbjct: 54  VSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLS 113

Query: 152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR 196
            + I+DNSP +Y   PDNAIPIKSWF DP+DT LL L+P L+ LR
Sbjct: 114 KVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLR 158

This model represents the putative phosphatase domain of a family of eukaryotic proteins including "Dullard" , and the NLI interacting factor (NIF)-like phosphatases. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDNxPxxa) and aparrently lacking the last aspartate. This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the pfam03031. Length = 162

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score =  197 bits (504), Expect = 2e-65
 Identities = 73/153 (47%), Positives = 95/153 (62%), Gaps = 5/153 (3%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD 90
           K+K LVLDLDETL+HS H      + K  T  DF++ V ID HP   +V KRP VD FL 
Sbjct: 1   KKKTLVLDLDETLVHSTH-----RSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLK 55

Query: 91  IVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL 150
             S+ +ELVVFTA + +Y   V D LD +++   RR +R  C    G Y KDLS ++ DL
Sbjct: 56  RASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLNRDL 115

Query: 151 SSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
           S + I+D+SP ++   P+N IPIK WF DP DT
Sbjct: 116 SKVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score =  170 bits (432), Expect = 2e-54
 Identities = 73/164 (44%), Positives = 95/164 (57%), Gaps = 17/164 (10%)

Query: 33  KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIV 92
           K LVLDLDETL+HS        + +P  P DFV            +V KRP +D FL  +
Sbjct: 1   KTLVLDLDETLVHS--------SFEPDLPFDFV-----LNFNHGVYVKKRPGLDEFLQEL 47

Query: 93  SQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSS 152
           S++YE+V+FTAS + Y   V DKLD ++   + R YR+ CT     Y KDLS +  DLS 
Sbjct: 48  SKYYEIVIFTASSKEYADPVLDKLDPKKKYFKHRLYRESCTF----YVKDLSLLGRDLSR 103

Query: 153 IFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR 196
           + I+DNSP ++   PDN IPI  ++ DP DT LL LLP L  L 
Sbjct: 104 VVIVDNSPRSFLLQPDNGIPIPPFYGDPDDTELLKLLPFLKELA 147

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|227517 COG5190, FCP1, TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

 Score =  135 bits (341), Expect = 2e-38
 Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD 90
            +K LVLDLDETL+HS        + +  T  DF++KV I       +V KRP +D+FL 
Sbjct: 211 PKKTLVLDLDETLVHS--------SFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLG 262

Query: 91  IVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL 150
            +S+ +ELV FTAS++ Y   V D LD    +   R +R+ C   LG Y KD+S I   L
Sbjct: 263 KLSKIHELVYFTASVKRYADPVLDILD-SDKVFSHRLFRESCVSYLGVYIKDISKIGRSL 321

Query: 151 SSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR 196
             + I+DNSP +Y   P+NAIPI+ W SD  D  LL LLP L+ L 
Sbjct: 322 DKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLEDLP 367

Length = 390

>gnl|CDD|131304 TIGR02250, FCP1_euk, FCP1-like phosphatase, phosphatase domain

 Score = 57.7 bits (140), Expect = 6e-11
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 27/162 (16%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVH--------KR 82
           K+  LVLDLD+TLIH+       PT+      D     +  R  +R F           R
Sbjct: 5   KKLHLVLDLDQTLIHT----TKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLR 60

Query: 83  PHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARR-----HILRRRYYRQHCTPELG 137
           P +  FL   S+ YE+ V+T     Y  A+A  +D         I+ R         E G
Sbjct: 61  PFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRD--------ESG 112

Query: 138 S-YTKDLSAISP-DLSSIFILDNSPGAYRGFPDNAIPIKSWF 177
           S +TK L  + P D S + I+D+    +     N I I+ + 
Sbjct: 113 SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154

This model represents the phosphatase domain of the humanRNA polymerase II subunit A C-terminal domain phosphatase (FCP1, ) and closely related phosphatases from eukaryotes including plants, fungi and slime mold. This domain is a member of the haloacid dehalogenase (HAD) superfamily by virtue of a conserved set of three catalytic motifs and a conserved fold as predicted by PSIPRED. The third motif in this family is distinctive (hhhhDDppphW). This domain is classified as a "Class III" HAD, since there is no large "cap" domain found between motifs 1 and 2 or motifs 2 and 3.This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the pfam03031. Length = 156

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
KOG1605|consensus	262		100.0
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	100.0
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	100.0
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	100.0
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	100.0
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.97
KOG2832|consensus	393		99.97
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	99.94
KOG0323|consensus	635		99.82
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.17
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.05
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.0
PLN02575	381	haloacid dehalogenase-like hydrolase	98.99
PRK13225	273	phosphoglycolate phosphatase; Provisional	98.93
PRK13288	214	pyrophosphatase PpaX; Provisional	98.92
PRK11587	218	putative phosphatase; Provisional	98.91
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.88
COG4996	164	Predicted phosphatase [General function prediction	98.87
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	98.84
PRK13226	229	phosphoglycolate phosphatase; Provisional	98.84
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.82
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	98.81
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	98.8
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.77
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.73
PLN02940	382	riboflavin kinase	98.67
PRK13223	272	phosphoglycolate phosphatase; Provisional	98.67
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	98.66
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.66
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.65
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	98.65
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.62
PRK10563	221	6-phosphogluconate phosphatase; Provisional	98.62
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	98.62
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.61
PHA02597	197	30.2 hypothetical protein; Provisional	98.58
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	98.54
PHA02530	300	pseT polynucleotide kinase; Provisional	98.51
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.5
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	98.5
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	98.37
PRK06769	173	hypothetical protein; Validated	98.34
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	98.34
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	98.33
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	98.27
PRK14988	224	GMP/IMP nucleotidase; Provisional	98.24
COG0546	220	Gph Predicted phosphatases [General function predi	98.23
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	98.22
KOG3109|consensus	244		98.21
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	98.2
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.2
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	98.19
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	98.19
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	98.18
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.16
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	98.12
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	98.12
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	98.09
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.08
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	98.07
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.06
PRK09449	224	dUMP phosphatase; Provisional	98.04
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.0
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	97.98
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.95
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	97.95
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.91
PLN02954	224	phosphoserine phosphatase	97.88
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	97.88
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	97.78
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	97.78
PRK13222	226	phosphoglycolate phosphatase; Provisional	97.74
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.74
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.74
PRK11133	322	serB phosphoserine phosphatase; Provisional	97.73
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	97.71
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	97.71
PRK08238	479	hypothetical protein; Validated	97.69
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	97.66
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	97.65
PLN02811	220	hydrolase	97.61
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.59
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	97.56
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.53
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	97.49
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	97.49
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	97.43
PTZ00445	219	p36-lilke protein; Provisional	97.38
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.37
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	97.36
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.28
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	97.26
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.23
KOG2914|consensus	222		97.23
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.2
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.07
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	97.07
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	97.04
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.92
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.91
PRK10748	238	flavin mononucleotide phosphatase; Provisional	96.86
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.81
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	96.66
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	96.53
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	96.5
PRK01158	230	phosphoglycolate phosphatase; Provisional	96.5
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.45
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	96.38
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	96.38
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	96.38
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	96.38
PRK10513	270	sugar phosphate phosphatase; Provisional	96.37
PRK10444	248	UMP phosphatase; Provisional	96.35
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.3
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	96.29
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.24
PLN02645	311	phosphoglycolate phosphatase	96.23
PRK10976	266	putative hydrolase; Provisional	96.2
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.19
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	96.11
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.08
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.97
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	95.77
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	95.7
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	95.65
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.64
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	95.64
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	95.51
PTZ00174	247	phosphomannomutase; Provisional	95.47
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	95.47
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.37
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	95.0
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	94.89
KOG3120|consensus	256		94.89
PLN02887	580	hydrolase family protein	94.86
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	94.77
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	94.28
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	94.26
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	94.21
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	94.16
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	94.03
COG4359	220	Uncharacterized conserved protein [Function unknow	93.97
PLN02423	245	phosphomannomutase	93.8
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	93.57
KOG3085|consensus	237		93.37
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	93.28
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	93.27
PLN02151	354	trehalose-phosphatase	93.27
PLN02580	384	trehalose-phosphatase	92.85
PLN03017	366	trehalose-phosphatase	92.65
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	92.38
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	92.3
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	92.13
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	92.0
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	91.96
COG2503	274	Predicted secreted acid phosphatase [General funct	91.8
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	91.77
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	91.67
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	91.58
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	91.54
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	91.45
PRK14988	224	GMP/IMP nucleotidase; Provisional	91.43
PRK10748	238	flavin mononucleotide phosphatase; Provisional	91.18
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	91.07
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	91.02
PRK11590	211	hypothetical protein; Provisional	90.99
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	90.8
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	90.59
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	90.54
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	90.4
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	89.88
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	89.7
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	89.65
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	89.53
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	89.47
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	89.36
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	89.03
PLN02382	413	probable sucrose-phosphatase	89.01
PRK09449	224	dUMP phosphatase; Provisional	88.64
PRK13222	226	phosphoglycolate phosphatase; Provisional	88.38
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	88.29
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	87.8
PRK11590	211	hypothetical protein; Provisional	87.38
KOG1615|consensus	227		87.25
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	87.01
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	86.85
PLN02177	497	glycerol-3-phosphate acyltransferase	86.47
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	85.84
COG4229	229	Predicted enolase-phosphatase [Energy production a	85.8
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	85.79
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	85.65
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	85.34
KOG4549|consensus	144		84.89
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	84.83
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	84.44
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	84.37
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	83.24
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	81.79
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	80.11

>KOG1605|consensus

Probab=100.00  E-value=5.3e-47  Score=311.63  Aligned_cols=183  Identities=55%  Similarity=0.893  Sum_probs=168.3

Q ss_pred             hccccceec-CCCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHH
Q psy17244          8 QHQAVKYEI-FPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVD   86 (196)
Q Consensus         8 ~~~~~~~~~-~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~   86 (196)
                      +++..++.. .+..|..+.++...+|++|||||||||+||+..      .++....+|.+++.+++....+||.+|||++
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~kk~lVLDLDeTLvHss~~------~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vd  137 (262)
T KOG1605|consen   64 KYQPVKYASQTPLSPVLPLRLATVGRKTLVLDLDETLVHSSLN------LKPIVNADFTVPVEIDGHIHQVYVRKRPHVD  137 (262)
T ss_pred             hcccccccccccccccCCcccccCCCceEEEeCCCcccccccc------cCCCCCcceeeeeeeCCcceEEEEEcCCCHH
Confidence            345555554 367777777888899999999999999999842      3456788999999999888999999999999


Q ss_pred             HHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCC
Q psy17244         87 FFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGF  166 (196)
Q Consensus        87 eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~  166 (196)
                      +||..++++||++||||+...||.+|++.||+.+++|++|+||++|....|.|+|||..+|+++++||||||+|.++.+|
T Consensus       138 eFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~  217 (262)
T KOG1605|consen  138 EFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQ  217 (262)
T ss_pred             HHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccC
Confidence            99999999999999999999999999999999879999999999999999999999999999999999999999999999


Q ss_pred             CCceEeeceecCCCCChHHHhhHHHHhhcC
Q psy17244        167 PDNAIPIKSWFSDPSDTALLALLPVLDALR  196 (196)
Q Consensus       167 ~~N~I~v~~f~~~~~D~~L~~l~~~L~~Lr  196 (196)
                      |+|||+|++|++++.|+||++|+|||++|+
T Consensus       218 p~NgIpI~sw~~d~~D~eLL~LlpfLe~L~  247 (262)
T KOG1605|consen  218 PENGIPIKSWFDDPTDTELLKLLPFLEALA  247 (262)
T ss_pred             ccCCCcccccccCCChHHHHHHHHHHHHhc
Confidence            999999999999999999999999999986

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=100.00  E-value=2.4e-43  Score=273.99  Aligned_cols=158  Identities=54%  Similarity=0.894  Sum_probs=146.9

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAA  111 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~  111 (196)
                      |++|||||||||||+...+       +....++.+.+..++....++|++|||+.+||++|++.||++|||++++.||++
T Consensus         1 k~~lvlDLDeTLi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~   73 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKM-------PKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADP   73 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCC-------CCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHH
Confidence            6899999999999997542       122678888888877788999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhhHHH
Q psy17244        112 VADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPV  191 (196)
Q Consensus       112 vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l~~~  191 (196)
                      +++.++|.+.+|+++++|++|...++.+.|+|+.+|++++++|+|||++..|..+++|||+|.+|.|+.+|++|.+|+++
T Consensus        74 il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~  153 (162)
T TIGR02251        74 VLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPF  153 (162)
T ss_pred             HHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHH
Confidence            99999998779999999999998888899999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcC
Q psy17244        192 LDALR  196 (196)
Q Consensus       192 L~~Lr  196 (196)
                      |+.|+
T Consensus       154 L~~l~  158 (162)
T TIGR02251       154 LEGLR  158 (162)
T ss_pred             HHHHh
Confidence            99885

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=100.00  E-value=3.3e-39  Score=249.11  Aligned_cols=151  Identities=44%  Similarity=0.751  Sum_probs=121.3

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~v  112 (196)
                      |+|||||||||||+...+..        ..++...    +....+++++|||+++||+++++.||++|||++++.||++|
T Consensus         1 k~LVlDLD~TLv~~~~~~~~--------~~~~~~~----~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v   68 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPL--------PYDFKII----DQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPV   68 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCT--------T-SEEEE----TEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCC--------Cccccee----ccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHH
Confidence            69999999999999965321        2222221    24567899999999999999999999999999999999999


Q ss_pred             HHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCC-CCChHHHhhHHH
Q psy17244        113 ADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSD-PSDTALLALLPV  191 (196)
Q Consensus       113 l~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~-~~D~~L~~l~~~  191 (196)
                      ++.|+|.+.+|+++++|++|....+.+.|||+++|+++++||+|||++.+|..+++|+|+|++|.++ ++|++|.+|+++
T Consensus        69 ~~~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~  148 (159)
T PF03031_consen   69 LDALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPF  148 (159)
T ss_dssp             HHHHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHH
T ss_pred             HHhhhhhccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHH
Confidence            9999997789999999999998877778999999999999999999999999999999999999999 899999999999


Q ss_pred             Hhhc
Q psy17244        192 LDAL  195 (196)
Q Consensus       192 L~~L  195 (196)
                      |++|
T Consensus       149 L~~l  152 (159)
T PF03031_consen  149 LEEL  152 (159)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9986

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=100.00  E-value=4.9e-37  Score=244.02  Aligned_cols=142  Identities=20%  Similarity=0.261  Sum_probs=119.1

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG  109 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya  109 (196)
                      .+|++|||||||||+|+.....                        ..++.+|||+++||++++++|||+||||+++.||
T Consensus        19 ~~kklLVLDLDeTLvh~~~~~~------------------------~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya   74 (195)
T TIGR02245        19 EGKKLLVLDIDYTLFDHRSPAE------------------------TGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWI   74 (195)
T ss_pred             CCCcEEEEeCCCceEcccccCC------------------------CceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHH
Confidence            4899999999999999753210                        2358999999999999999999999999999999


Q ss_pred             HHHHHHhcCCC-ceeeEEEEecCCCC------CCCC-ccccccccCC------CCCcEEEEECCCccccCCCCceEeece
Q psy17244        110 AAVADKLDARR-HILRRRYYRQHCTP------ELGS-YTKDLSAISP------DLSSIFILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       110 ~~vl~~ldp~~-~~f~~~l~r~~c~~------~~~~-~~KdL~~l~~------~~~~~iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                      +.+++.+++.. .-+...++.++|..      ..|. +.|||+.+|+      ++++||||||+|.++..||+|||+|++
T Consensus        75 ~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~  154 (195)
T TIGR02245        75 EIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRP  154 (195)
T ss_pred             HHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCC
Confidence            99999997532 22444556677742      2343 5999998843      789999999999999999999999999


Q ss_pred             ecC----CCCChHHHhhHHHHhhc
Q psy17244        176 WFS----DPSDTALLALLPVLDAL  195 (196)
Q Consensus       176 f~~----~~~D~~L~~l~~~L~~L  195 (196)
                      |.+    +.+|++|++|++||+.|
T Consensus       155 f~~~~~~~~~D~eL~~L~~yL~~l  178 (195)
T TIGR02245       155 FKKAHANRGTDQELLKLTQYLKTI  178 (195)
T ss_pred             ccccCCCCcccHHHHHHHHHHHHH
Confidence            995    46899999999999987

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=100.00  E-value=1.5e-33  Score=217.58  Aligned_cols=145  Identities=27%  Similarity=0.358  Sum_probs=116.9

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCC--CCCCC----CCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEc
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTV--KPGTP----PDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFT  102 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~--~~~~~----~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T  102 (196)
                      ..+|++||||||+|||||...+..+...  .+...    ..-...+.+.  ...+++++|||+.+||+++++.|+++|||
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--~~~~~v~~rPgv~efL~~l~~~yel~I~T   80 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG--TMWYLTKLRPFLHEFLKEASKLYEMHVYT   80 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC--CeEEEEEECCCHHHHHHHHHhhcEEEEEe
Confidence            4699999999999999998764322110  01100    0011222222  46789999999999999999999999999


Q ss_pred             CCchhhHHHHHHHhcCCCceee-EEEEecCCCCCCCCccccccc-cCCCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244        103 ASMEIYGAAVADKLDARRHILR-RRYYRQHCTPELGSYTKDLSA-ISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       103 ~~~~~ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~~~~~KdL~~-l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      ++.+.||+++++.+||.+.+|+ .+++|++|.   +.+.|||+. ++++++++|||||++.+|..||+|+|+|++|..
T Consensus        81 ~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~~  155 (156)
T TIGR02250        81 MGTRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYNY  155 (156)
T ss_pred             CCcHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCccc
Confidence            9999999999999999977995 457899996   677999955 588999999999999999999999999999963

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.97  E-value=1.2e-30  Score=199.69  Aligned_cols=148  Identities=49%  Similarity=0.814  Sum_probs=133.3

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      +|++|||||||||+|+...+.     .+....++.+.+.++.....+.+.+|||+.+||++|++.|+++|||++.+.|++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~   75 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSF-----KEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYAD   75 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcC-----CCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHH
Confidence            588999999999999975321     234566777887887888899999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCCh
Q psy17244        111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT  183 (196)
Q Consensus       111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~  183 (196)
                      .+++.+++...+|..++++++|...++.+.|+++++|.+++++|+|||++..|..+++|||.|++|.++.+|.
T Consensus        76 ~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~  148 (148)
T smart00577       76 PVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT  148 (148)
T ss_pred             HHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence            9999999965567999999999988878999999999999999999999999999999999999999998874

>KOG2832|consensus

Probab=99.97  E-value=3.6e-30  Score=216.67  Aligned_cols=142  Identities=29%  Similarity=0.550  Sum_probs=135.4

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG  109 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya  109 (196)
                      +.+.||||+|.++|||..|+-.                       .++.+++|||++.||..|+++|||+|||+.+..||
T Consensus       187 Qp~yTLVleledvLVhpdws~~-----------------------tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~  243 (393)
T KOG2832|consen  187 QPPYTLVLELEDVLVHPDWSYK-----------------------TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTV  243 (393)
T ss_pred             CCCceEEEEeeeeEeccchhhh-----------------------cCceeccCchHHHHHHhhcccceEEEEecCCccch
Confidence            4889999999999999998631                       35779999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhhH
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALL  189 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l~  189 (196)
                      .++++.+||. ++++++++|++|.+..|..+|||+.|+||+.+||+||-++.+..+||+|.|.+++|.|+++|+.|.+|+
T Consensus       244 ~pl~d~lDP~-g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~  322 (393)
T KOG2832|consen  244 FPLLDALDPK-GYISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLL  322 (393)
T ss_pred             hhhHhhcCCc-ceEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHH
Confidence            9999999999 799999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhc
Q psy17244        190 PVLDAL  195 (196)
Q Consensus       190 ~~L~~L  195 (196)
                      ++|+.|
T Consensus       323 ~FL~~i  328 (393)
T KOG2832|consen  323 AFLEYI  328 (393)
T ss_pred             HHHHHH
Confidence            999975

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=99.94  E-value=3.3e-27  Score=203.21  Aligned_cols=160  Identities=46%  Similarity=0.728  Sum_probs=146.1

Q ss_pred             CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchh
Q psy17244         28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEI  107 (196)
Q Consensus        28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~  107 (196)
                      ....+++|++|||+||+||....        ....+|.+.+........++|..||++++|+..++++|++++||++...
T Consensus       208 ~~~~~k~L~l~lde~l~~S~~~~--------~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~  279 (390)
T COG5190         208 STSPKKTLVLDLDETLVHSSFRY--------ITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR  279 (390)
T ss_pred             CCCCccccccCCCccceeecccc--------ccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence            35688999999999999998532        2344577766666666789999999999999999999999999999999


Q ss_pred             hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHh
Q psy17244        108 YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA  187 (196)
Q Consensus       108 ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~  187 (196)
                      ||++|++.|++.+ .|++++||++|....|.|+|||..+++++..|||||++|.+|.++|+|+|++++|.+++.|.+|+.
T Consensus       280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~  358 (390)
T COG5190         280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN  358 (390)
T ss_pred             hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence            9999999999995 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhhcC
Q psy17244        188 LLPVLDALR  196 (196)
Q Consensus       188 l~~~L~~Lr  196 (196)
                      |+++|+.|.
T Consensus       359 ll~~le~L~  367 (390)
T COG5190         359 LLPFLEDLP  367 (390)
T ss_pred             hcccccccc
Confidence            999998873

>KOG0323|consensus

Probab=99.82  E-value=2.9e-20  Score=168.29  Aligned_cols=142  Identities=25%  Similarity=0.303  Sum_probs=110.9

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCC-----C----CCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEc
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVK-----P----GTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFT  102 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~-----~----~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T  102 (196)
                      ++.||+|||.||+|+.......++..     .    .+..-+.+  ........++|++||++.+||+++++.||++|||
T Consensus       146 ~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~--~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT  223 (635)
T KOG0323|consen  146 KLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRF--NPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT  223 (635)
T ss_pred             cceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceee--cccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence            36999999999999986544332111     1    11111211  1113446799999999999999999999999999


Q ss_pred             CCchhhHHHHHHHhcCCCceeeEE-EEecCCCCCCCCccccccccC-CCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244        103 ASMEIYGAAVADKLDARRHILRRR-YYRQHCTPELGSYTKDLSAIS-PDLSSIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       103 ~~~~~ya~~vl~~ldp~~~~f~~~-l~r~~c~~~~~~~~KdL~~l~-~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      .|++.||..|++.|||.+.+|+.| ++|+.   ....-.+||..++ ++.+++|||||+..+|..++.|.|.|.+|..
T Consensus       224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~y  298 (635)
T KOG0323|consen  224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYPY  298 (635)
T ss_pred             ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeeec
Confidence            999999999999999999999866 56776   2233367888775 5778899999999999999999999999873

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.17  E-value=1.2e-10  Score=91.38  Aligned_cols=156  Identities=13%  Similarity=0.070  Sum_probs=101.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhhHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIYGA  110 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~ya~  110 (196)
                      ..+|||||+||+.....+-..+...+.....-.+.     ......+.++||+.++|++|. +.+.+.|.|++ ...+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~   77 (174)
T TIGR01685         3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIII-----DKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAY   77 (174)
T ss_pred             cEEEEeCCCCCcCcccccccCCCceeccCCCCeEE-----eCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHH
Confidence            47999999999987654322211111110000010     112345788999999999997 78999999998 999999


Q ss_pred             HHHHHhcCCC--------ceeeEEEEecCCCCCCC--Ccccccccc---CCCCCcEEEEECCCccccCCCCceEeeceec
Q psy17244        111 AVADKLDARR--------HILRRRYYRQHCTPELG--SYTKDLSAI---SPDLSSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       111 ~vl~~ldp~~--------~~f~~~l~r~~c~~~~~--~~~KdL~~l---~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      .+++.++...        .+|+.+++.+.....+.  ...+.+...   |.+++++++|||++........+|+.+....
T Consensus        78 ~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~  157 (174)
T TIGR01685        78 EILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP  157 (174)
T ss_pred             HHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence            9999988641        47887777654321111  111222222   4789999999999999888889999887775


Q ss_pred             CCCCChHHHhhHHHHhhcC
Q psy17244        178 SDPSDTALLALLPVLDALR  196 (196)
Q Consensus       178 ~~~~D~~L~~l~~~L~~Lr  196 (196)
                      ...   .+......||..|
T Consensus       158 ~g~---~~~~~~~~~~~~~  173 (174)
T TIGR01685       158 SGM---DKGTFKKILEMWR  173 (174)
T ss_pred             CCc---cHHHHHHHHHHhc
Confidence            432   2333444444443

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.05  E-value=2.1e-10  Score=95.44  Aligned_cols=100  Identities=8%  Similarity=0.037  Sum_probs=84.9

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|++|. +.+.++|.|+++..+++.+++.++.. .+|+.+++.+.+...++   .+.+-++++|.+++++
T Consensus       107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~  185 (260)
T PLN03243        107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC  185 (260)
T ss_pred             CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence            3567999999999998 67999999999999999999999876 58999998887765443   6788889999999999


Q ss_pred             EEEECCCccccCCCCceEeeceecC
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      ++|+|+..-......+|+.+..+.+
T Consensus       186 l~IgDs~~Di~aA~~aG~~~i~v~g  210 (260)
T PLN03243        186 IVFGNSNSSVEAAHDGCMKCVAVAG  210 (260)
T ss_pred             EEEcCCHHHHHHHHHcCCEEEEEec
Confidence            9999999877777777776665554

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.00  E-value=1.9e-10  Score=85.80  Aligned_cols=110  Identities=15%  Similarity=0.139  Sum_probs=77.8

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhhHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIYGA  110 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~ya~  110 (196)
                      +.+|+||||||+.......        + .+-.+    +.   .   ...||+.++|++|+ +.+.++|.|++ .+.++.
T Consensus         1 kli~~DlD~Tl~~~~~~~~--------~-~~~~~----~~---~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~   61 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVV--------G-EDPII----DL---E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAY   61 (128)
T ss_pred             CEEEEeCCCCCCCCCcccc--------c-CCcch----hh---H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHH
Confidence            4789999999997732100        0 00000    00   0   57899999999997 68999999999 899999


Q ss_pred             HHHHHhc-------CCCceeeEEEEecCCCCCCCCccccccccC--CCCCcEEEEECCCccc
Q psy17244        111 AVADKLD-------ARRHILRRRYYRQHCTPELGSYTKDLSAIS--PDLSSIFILDNSPGAY  163 (196)
Q Consensus       111 ~vl~~ld-------p~~~~f~~~l~r~~c~~~~~~~~KdL~~l~--~~~~~~iiIDD~~~~~  163 (196)
                      .+++..+       .. .+|..+...+.. .....+.+-++++|  .+++++++|||++...
T Consensus        62 ~~l~~~~~~~~i~~l~-~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~  121 (128)
T TIGR01681        62 ELLKIFEDFGIIFPLA-EYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN  121 (128)
T ss_pred             HHHHhccccccchhhH-hhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence            9999876       22 456555544322 22336677888889  9999999999998653

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=98.99  E-value=6e-10  Score=97.11  Aligned_cols=99  Identities=7%  Similarity=-0.015  Sum_probs=84.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.+||+.|. +.+.++|-|++...+++.+++.++.. .+|+.++..+++...++   .|..-++++|.+++++|
T Consensus       215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl  293 (381)
T PLN02575        215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI  293 (381)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            567899999999997 68999999999999999999999987 68999999888765444   67888899999999999


Q ss_pred             EEECCCccccCCCCceEeeceecC
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +|+|+..-......+|+.+....+
T Consensus       294 ~IGDS~~DIeAAk~AGm~~IgV~~  317 (381)
T PLN02575        294 VFGNSNQTVEAAHDARMKCVAVAS  317 (381)
T ss_pred             EEcCCHHHHHHHHHcCCEEEEECC
Confidence            999999877666666776665543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=98.93  E-value=1.5e-09  Score=91.00  Aligned_cols=96  Identities=6%  Similarity=-0.003  Sum_probs=74.9

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILD  157 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiID  157 (196)
                      +..-||+.++|++|. +.+.++|.|++...++..+++.++.. .+|+.+.+.+........+.+-+++++.+++++++|+
T Consensus       141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG  219 (273)
T PRK13225        141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG  219 (273)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence            566899999999998 67999999999999999999999886 5888776554432222344556677788999999999


Q ss_pred             CCCccccCCCCceEeece
Q psy17244        158 NSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       158 D~~~~~~~~~~N~I~v~~  175 (196)
                      |++.-......+|+.+..
T Consensus       220 Ds~~Di~aA~~AG~~~I~  237 (273)
T PRK13225        220 DETRDVEAARQVGLIAVA  237 (273)
T ss_pred             CCHHHHHHHHHCCCeEEE
Confidence            999766655566666543

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=98.92  E-value=1.2e-09  Score=87.58  Aligned_cols=97  Identities=10%  Similarity=0.005  Sum_probs=81.4

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|. +.+.++|.|++...++..+++.++.. .+|+.++..+.+...+   ..+.+-+++++.+++++
T Consensus        80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~  158 (214)
T PRK13288         80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA  158 (214)
T ss_pred             hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence            4678899999999998 58999999999999999999999887 6899988877765443   36677888889999999


Q ss_pred             EEEECCCccccCCCCceEeece
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                      ++|+|++.-......+|+.+..
T Consensus       159 ~~iGDs~~Di~aa~~aG~~~i~  180 (214)
T PRK13288        159 LMVGDNHHDILAGKNAGTKTAG  180 (214)
T ss_pred             EEECCCHHHHHHHHHCCCeEEE
Confidence            9999999877766677776544

>PRK11587 putative phosphatase; Provisional

Probab=98.91  E-value=2.9e-09  Score=85.87  Aligned_cols=99  Identities=6%  Similarity=-0.045  Sum_probs=78.8

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|. +.+.++|-|+++..++...++..+..  .+..+++.+++...++   .+.+-++++|.+++++
T Consensus        81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~  158 (218)
T PRK11587         81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC  158 (218)
T ss_pred             CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence            4678999999999997 78999999999999888888777653  3566677666544333   6778888999999999


Q ss_pred             EEEECCCccccCCCCceEeeceecC
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      |+|+|++.-.......|+.+..+.+
T Consensus       159 l~igDs~~di~aA~~aG~~~i~v~~  183 (218)
T PRK11587        159 VVVEDAPAGVLSGLAAGCHVIAVNA  183 (218)
T ss_pred             EEEecchhhhHHHHHCCCEEEEECC
Confidence            9999999877777777777666653

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.88  E-value=2.2e-09  Score=79.84  Aligned_cols=115  Identities=20%  Similarity=0.183  Sum_probs=80.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc------
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM------  105 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~------  105 (196)
                      +.++||+||||++.....      .+                 .......||+.++|++|. +.+.++|.|++.      
T Consensus         1 k~~~~D~dgtL~~~~~~~------~~-----------------~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~   57 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYV------DD-----------------EDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGK   57 (132)
T ss_pred             CEEEEeCCCceecCCCCC------CC-----------------HHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccH
Confidence            479999999999642110      00                 012567899999999997 679999999999      


Q ss_pred             --hhhHHHHHHHhcCCCceeeEEEEecCC-CCCCCCcccccccc-CCCCCcEEEEEC-CCccccCCCCceEee
Q psy17244        106 --EIYGAAVADKLDARRHILRRRYYRQHC-TPELGSYTKDLSAI-SPDLSSIFILDN-SPGAYRGFPDNAIPI  173 (196)
Q Consensus       106 --~~ya~~vl~~ldp~~~~f~~~l~r~~c-~~~~~~~~KdL~~l-~~~~~~~iiIDD-~~~~~~~~~~N~I~v  173 (196)
                        ..++..+++.++..   +...++...+ ......+.+-++++ +.+++++++|+| +..-......+|+..
T Consensus        58 ~~~~~~~~~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~  127 (132)
T TIGR01662        58 FSSGRVARRLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF  127 (132)
T ss_pred             HHHHHHHHHHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence              88899999998765   2223333222 22233567778888 599999999999 576655555555543

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.87  E-value=1.1e-08  Score=75.87  Aligned_cols=147  Identities=19%  Similarity=0.169  Sum_probs=103.9

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v  112 (196)
                      .+|||+|+||++....+...+.+..-+  .-.++     +..+.-|.++|++.+||.++. .+|-+..+|.+.+.-|-++
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs--~n~i~-----Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~a   74 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVS--SNTIE-----DSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKA   74 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecC--cccee-----cCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHH
Confidence            589999999998865433322111111  01111     224567999999999999998 6899999999999999999


Q ss_pred             HHHhcCCCceeeEEEEecCCCCCCCCcccccccc------CCCCCcEEEEECCCcccc---CCCCceEeeceecCCCCCh
Q psy17244        113 ADKLDARRHILRRRYYRQHCTPELGSYTKDLSAI------SPDLSSIFILDNSPGAYR---GFPDNAIPIKSWFSDPSDT  183 (196)
Q Consensus       113 l~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l------~~~~~~~iiIDD~~~~~~---~~~~N~I~v~~f~~~~~D~  183 (196)
                      +..++.. ++|.+.....+-.. ..+..+-|+.+      ...|.++|.+||+...+.   .+-+|.=+++.|.+-+.-.
T Consensus        75 Lral~~~-~yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~  152 (164)
T COG4996          75 LRALDLL-QYFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYS  152 (164)
T ss_pred             HHHhchh-hhEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHH
Confidence            9999998 69987776554332 22334445444      347899999999997653   5667888888888875555


Q ss_pred             HHHhhH
Q psy17244        184 ALLALL  189 (196)
Q Consensus       184 ~L~~l~  189 (196)
                      +...|+
T Consensus       153 ei~slL  158 (164)
T COG4996         153 EIFSLL  158 (164)
T ss_pred             HHHHHH
Confidence            554444

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=98.84  E-value=2.6e-09  Score=83.75  Aligned_cols=95  Identities=8%  Similarity=0.023  Sum_probs=78.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +..-|+ .+.|..+.+.+.++|-|++...+++.+++.++-. .+|+.+++.+++...++   .+..-++++|.+++++|+
T Consensus        87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  164 (188)
T PRK10725         87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLR-RYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV  164 (188)
T ss_pred             CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcH-hHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence            445676 4899999877899999999999999999999876 68999998887765444   567788889999999999


Q ss_pred             EECCCccccCCCCceEeece
Q psy17244        156 LDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~  175 (196)
                      |+|++.-+.....+|+.+..
T Consensus       165 igDs~~di~aA~~aG~~~i~  184 (188)
T PRK10725        165 FEDADFGIQAARAAGMDAVD  184 (188)
T ss_pred             EeccHhhHHHHHHCCCEEEe
Confidence            99999887777777776544

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=98.84  E-value=3.2e-09  Score=86.43  Aligned_cols=96  Identities=7%  Similarity=-0.077  Sum_probs=78.1

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|+ +.+.++|-|++...++..+++.++.. .+|..+.+.+.+...++   .+.+-++++|.+++++
T Consensus        93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~  171 (229)
T PRK13226         93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC  171 (229)
T ss_pred             cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch-hcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence            4678999999999997 57999999999999999999998876 57877777776544333   5778888999999999


Q ss_pred             EEEECCCccccCCCCceEeec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++|+|++.-.......|+.+.
T Consensus       172 l~IGDs~~Di~aA~~aG~~~i  192 (229)
T PRK13226        172 VYVGDDERDILAARAAGMPSV  192 (229)
T ss_pred             EEeCCCHHHHHHHHHCCCcEE
Confidence            999999976665556666554

>TIGR01684 viral_ppase viral phosphatase

Probab=98.82  E-value=1.2e-08  Score=85.70  Aligned_cols=125  Identities=17%  Similarity=0.112  Sum_probs=89.8

Q ss_pred             ccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeC-ccHHHHHHHhh-hCceEEEEcC
Q psy17244         26 RLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKR-PHVDFFLDIVS-QWYELVVFTA  103 (196)
Q Consensus        26 ~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~R-P~l~eFL~~l~-~~yei~I~T~  103 (196)
                      ......++.+||||||||+....                             -|..| ||+.+.|++|. +++.++|||+
T Consensus       120 ~~~~~~~kvIvFDLDgTLi~~~~-----------------------------~v~irdPgV~EaL~~LkekGikLaIaTS  170 (301)
T TIGR01684       120 SKVFEPPHVVVFDLDSTLITDEE-----------------------------PVRIRDPRIYDSLTELKKRGCILVLWSY  170 (301)
T ss_pred             ccccccceEEEEecCCCCcCCCC-----------------------------ccccCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            34556778999999999998752                             16789 99999999998 4799999999


Q ss_pred             CchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC----------------Cccccc-----------------cccCCC-
Q psy17244        104 SMEIYGAAVADKLDARRHILRRRYYRQHCTPELG----------------SYTKDL-----------------SAISPD-  149 (196)
Q Consensus       104 ~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~----------------~~~KdL-----------------~~l~~~-  149 (196)
                      +.+.++..+++.++.. .+|..+++.++....++                .+..|.                 ++.|.+ 
T Consensus       171 ~~Re~v~~~L~~lGLd-~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~  249 (301)
T TIGR01684       171 GDRDHVVESMRKVKLD-RYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNY  249 (301)
T ss_pred             CCHHHHHHHHHHcCCC-cccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCce
Confidence            9999999999999998 58877776555444321                122333                 222332 


Q ss_pred             CCcEEEEECCCccccCCCCceEeeceecCCCC
Q psy17244        150 LSSIFILDNSPGAYRGFPDNAIPIKSWFSDPS  181 (196)
Q Consensus       150 ~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~  181 (196)
                      .+.+-+|||-+.. ..+-+|-+.|...-...+
T Consensus       250 ~KtitLVDDl~~N-n~~YD~fv~v~rcp~P~~  280 (301)
T TIGR01684       250 FKSITLVDDLADN-NFNYDYFVNVSRCPVPVN  280 (301)
T ss_pred             eeeEEEeccCccc-CccceeEEEeeeCCCCch
Confidence            2456899998864 344477777776654433

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=98.81  E-value=2.5e-09  Score=86.85  Aligned_cols=100  Identities=12%  Similarity=0.068  Sum_probs=86.5

Q ss_pred             EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.+||++|.+ ..-+++-|++++..+..+++.++.. .+|..+++.++....++   .|.+-+++||.+++++
T Consensus        84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~-~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~C  162 (221)
T COG0637          84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL-DYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEEC  162 (221)
T ss_pred             CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh-hhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHe
Confidence            37899999999999985 4999999999999999999999987 68998888877766644   7899999999999999


Q ss_pred             EEEECCCccccCCCCceEeeceecC
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      |+|||++.-.......|+.+..+.+
T Consensus       163 vviEDs~~Gi~Aa~aAGm~vv~v~~  187 (221)
T COG0637         163 VVVEDSPAGIQAAKAAGMRVVGVPA  187 (221)
T ss_pred             EEEecchhHHHHHHHCCCEEEEecC
Confidence            9999999877666667777777765

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=98.80  E-value=8e-09  Score=83.39  Aligned_cols=100  Identities=14%  Similarity=-0.019  Sum_probs=83.5

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ..+.||+.++|+.++ +.+.++|.|++....++.+++.++.. .+|+.++..+.....++   .+..-++.+|.++++++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  169 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR-DYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV  169 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            567899999999997 68999999999999999999999877 68988888776554433   56778888899999999


Q ss_pred             EEECCCccccCCCCceEeeceecCC
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSWFSD  179 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f~~~  179 (196)
                      +|+|++.-.......|+.+.-+.+.
T Consensus       170 ~igDs~~Di~aA~~aG~~~i~v~~~  194 (222)
T PRK10826        170 ALEDSFNGMIAAKAARMRSIVVPAP  194 (222)
T ss_pred             EEcCChhhHHHHHHcCCEEEEecCC
Confidence            9999998877777777776666543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.77  E-value=3.8e-08  Score=82.76  Aligned_cols=124  Identities=19%  Similarity=0.150  Sum_probs=91.5

Q ss_pred             CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeC-ccHHHHHHHhh-hCceEEEEcCCc
Q psy17244         28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKR-PHVDFFLDIVS-QWYELVVFTASM  105 (196)
Q Consensus        28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~R-P~l~eFL~~l~-~~yei~I~T~~~  105 (196)
                      ....++.+||||||||+.+...                             |..| |++.+.|++|+ +++.++|||++.
T Consensus       124 ~~~~~~~i~~D~D~TL~~~~~~-----------------------------v~irdp~V~EtL~eLkekGikLaIvTNg~  174 (303)
T PHA03398        124 VWEIPHVIVFDLDSTLITDEEP-----------------------------VRIRDPFVYDSLDELKERGCVLVLWSYGN  174 (303)
T ss_pred             EeeeccEEEEecCCCccCCCCc-----------------------------cccCChhHHHHHHHHHHCCCEEEEEcCCC
Confidence            3456789999999999988421                             7789 99999999999 589999999999


Q ss_pred             hhhHHHHHHHhcCCCceeeEEEEecCCCCCC----------------CCcccccc---cc--------------CCC-CC
Q psy17244        106 EIYGAAVADKLDARRHILRRRYYRQHCTPEL----------------GSYTKDLS---AI--------------SPD-LS  151 (196)
Q Consensus       106 ~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~----------------~~~~KdL~---~l--------------~~~-~~  151 (196)
                      ++++..+++.++.. .+|..+++.++.....                ..+..|..   .|              |.+ .+
T Consensus       175 Re~v~~~Le~lgL~-~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~K  253 (303)
T PHA03398        175 REHVVHSLKETKLE-GYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFK  253 (303)
T ss_pred             hHHHHHHHHHcCCC-ccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceec
Confidence            99999999999987 6887777766554432                12233333   22              322 23


Q ss_pred             cEEEEECCCccccCCCCceEeeceecCCCCC
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPSD  182 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D  182 (196)
                      .+-+|||-+.. ..+-+|-+.|...-...+|
T Consensus       254 tiTLVDDl~~N-n~~YD~fv~v~rcp~P~~D  283 (303)
T PHA03398        254 TITLVDDLKSN-NYSYDYFVNVKRCPEPVND  283 (303)
T ss_pred             cEEEeccCccc-CccceeEEEeeeCCCCcHH
Confidence            56899998866 4566788888877654443

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.73  E-value=1.8e-08  Score=78.91  Aligned_cols=115  Identities=17%  Similarity=0.096  Sum_probs=77.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-----
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME-----  106 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~-----  106 (196)
                      +.+.||.||||+......        ...               --+.+-||+.++|++|. +.|.++|.||++.     
T Consensus         2 ~~~~~D~Dgtl~~~~~~~--------~~~---------------~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~   58 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYV--------HEI---------------DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGY   58 (176)
T ss_pred             CEEEEeCCCCEeCCCCCC--------CCH---------------HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCc
Confidence            678999999999422110        000               01567799999999998 6799999999985     


Q ss_pred             ----------hhHHHHHHHhcCCCceeeEEEEec-----------CCCCCC---CCccccccccCCCCCcEEEEECCCcc
Q psy17244        107 ----------IYGAAVADKLDARRHILRRRYYRQ-----------HCTPEL---GSYTKDLSAISPDLSSIFILDNSPGA  162 (196)
Q Consensus       107 ----------~ya~~vl~~ldp~~~~f~~~l~r~-----------~c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~  162 (196)
                                .+...++..+...   |..+++..           .|...+   ..+..-++++|.+++++++|+|++.-
T Consensus        59 ~~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~D  135 (176)
T TIGR00213        59 FTEAQFEQLTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLED  135 (176)
T ss_pred             CCHHHHHHHHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHH
Confidence                      2333444443322   44444432           232222   26677788899999999999999987


Q ss_pred             ccCCCCceEee
Q psy17244        163 YRGFPDNAIPI  173 (196)
Q Consensus       163 ~~~~~~N~I~v  173 (196)
                      ......+|+.+
T Consensus       136 i~aA~~aG~~~  146 (176)
T TIGR00213       136 MQAGVAAKVKT  146 (176)
T ss_pred             HHHHHHCCCcE
Confidence            76666677643

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PLN02940 riboflavin kinase

Probab=98.67  E-value=1.6e-08  Score=88.52  Aligned_cols=97  Identities=5%  Similarity=-0.001  Sum_probs=79.4

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHH-HhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVAD-KLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~-~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      +...||+.++|++|. +.+.++|-|++...+++.+++ ..+-. .+|+.+++.+++...+.   .+..-++.+|.+++++
T Consensus        92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~  170 (382)
T PLN02940         92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC  170 (382)
T ss_pred             CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence            567899999999997 679999999999999999887 55654 68999999888765443   6778888899999999


Q ss_pred             EEEECCCccccCCCCceEeecee
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++|+|++.-.......|+.+...
T Consensus       171 l~VGDs~~Di~aA~~aGi~~I~v  193 (382)
T PLN02940        171 LVIEDSLPGVMAGKAAGMEVIAV  193 (382)
T ss_pred             EEEeCCHHHHHHHHHcCCEEEEE
Confidence            99999998776666666665444

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=98.67  E-value=2.1e-08  Score=83.89  Aligned_cols=94  Identities=13%  Similarity=0.043  Sum_probs=76.1

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +..+||+.++|+.|. +.+.++|.|+++..+++.+++.++.. .+|..+++.+.+...+.   .+.+-++++|.++++++
T Consensus       100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l  178 (272)
T PRK13223        100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL  178 (272)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence            567899999999997 68999999999999999999998776 57887777665544333   45677788899999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|+|+..-......+|+.+
T Consensus       179 ~IGD~~~Di~aA~~aGi~~  197 (272)
T PRK13223        179 FVGDSRSDVLAAKAAGVQC  197 (272)
T ss_pred             EECCCHHHHHHHHHCCCeE
Confidence            9999998766666667643

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=98.66  E-value=3e-08  Score=79.68  Aligned_cols=95  Identities=6%  Similarity=-0.018  Sum_probs=76.0

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEEecCCCCCC---CCccccccccCCC-CCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYYRQHCTPEL---GSYTKDLSAISPD-LSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~-~~~  152 (196)
                      ..+.||+.++|++|+ +.+.++|-|++...++..+++.++... .+|..+++.+.-...+   ..+.+-+++++.. +++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  165 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS  165 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence            578999999999997 789999999999999999999988641 5788887766543322   2566777888886 799


Q ss_pred             EEEEECCCccccCCCCceEee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +++|+|++.-.......|+.+
T Consensus       166 ~~~igD~~~Di~aa~~aG~~~  186 (220)
T TIGR03351       166 VAVAGDTPNDLEAGINAGAGA  186 (220)
T ss_pred             eEEeCCCHHHHHHHHHCCCCe
Confidence            999999997766666666665

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.66  E-value=3.1e-08  Score=72.08  Aligned_cols=107  Identities=14%  Similarity=0.083  Sum_probs=75.6

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAV  112 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~v  112 (196)
                      ++|||+||||+........                       ......+|++.++|+.+.+ .+.++|.|++.+.++..+
T Consensus         1 ~~vfD~D~tl~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~   57 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE-----------------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLEL   57 (139)
T ss_pred             CeEEccCCceEccCccccc-----------------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHH
Confidence            4799999999887632110                       1236889999999999995 599999999999999999


Q ss_pred             HHHhcCCCceeeEEEEecCCCCC----------------C---CCccccccccCCCCCcEEEEECCCcccc
Q psy17244        113 ADKLDARRHILRRRYYRQHCTPE----------------L---GSYTKDLSAISPDLSSIFILDNSPGAYR  164 (196)
Q Consensus       113 l~~ldp~~~~f~~~l~r~~c~~~----------------~---~~~~KdL~~l~~~~~~~iiIDD~~~~~~  164 (196)
                      ++.++.. ..+..++..+.....                +   ..+..-++.++.+++.++.|+|+..-..
T Consensus        58 ~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~  127 (139)
T cd01427          58 LEELGLD-DYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE  127 (139)
T ss_pred             HHHcCCc-hhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence            9998764 345555543322211                1   1223344555667899999999986543

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.65  E-value=4.6e-08  Score=75.84  Aligned_cols=124  Identities=14%  Similarity=0.054  Sum_probs=90.3

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-------
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-------  104 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-------  104 (196)
                      +.++||.||||++.....             |...       ..-.+..-||+.++|++|. +.|.++|.|+.       
T Consensus         2 ~~~~~d~dg~l~~~~~~~-------------~~~~-------~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~   61 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSD-------------FQVD-------ALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPS   61 (161)
T ss_pred             CEEEEeCCCCccccCCCc-------------cccC-------CHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCc
Confidence            579999999999853210             0000       0113778999999999998 57999999996       


Q ss_pred             --------chhhHHHHHHHhcCCCceeeEEEEe-----cCCCCCCC---CccccccccCCCCCcEEEEECCCccccCCCC
Q psy17244        105 --------MEIYGAAVADKLDARRHILRRRYYR-----QHCTPELG---SYTKDLSAISPDLSSIFILDNSPGAYRGFPD  168 (196)
Q Consensus       105 --------~~~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~  168 (196)
                              ...++..+++.++..   |..+++.     +++...++   .+..-++.++.+++++++|.|+..-......
T Consensus        62 ~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~  138 (161)
T TIGR01261        62 FPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN  138 (161)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH
Confidence                    356888888888875   6656543     45444333   4455667778899999999999876677778


Q ss_pred             ceEeeceecCC
Q psy17244        169 NAIPIKSWFSD  179 (196)
Q Consensus       169 N~I~v~~f~~~  179 (196)
                      +|+.+..+...
T Consensus       139 aGi~~i~~~~~  149 (161)
T TIGR01261       139 LGIRGIQYDEE  149 (161)
T ss_pred             CCCeEEEEChh
Confidence            88888877754

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=98.65  E-value=2e-08  Score=76.35  Aligned_cols=117  Identities=15%  Similarity=0.145  Sum_probs=78.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-----
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME-----  106 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~-----  106 (196)
                      ++++||+||||+......- .    ..                ...+...||+.++|+.|. +.|.++|.|++..     
T Consensus         1 ~~~~~d~dgtl~~~~~~~~-~----~~----------------~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~   59 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDY-P----RS----------------LDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGY   59 (147)
T ss_pred             CeEEEeCCCceeccCCccc-C----CC----------------HHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCc
Confidence            4789999999998863210 0    00                011467899999999997 7899999999874     


Q ss_pred             ----------hhHHHHHHHhcCCCceeeEEEEe-----cCCC---CCCCCccccccccCCCCCcEEEEECCCccccCCCC
Q psy17244        107 ----------IYGAAVADKLDARRHILRRRYYR-----QHCT---PELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPD  168 (196)
Q Consensus       107 ----------~ya~~vl~~ldp~~~~f~~~l~r-----~~c~---~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~  168 (196)
                                ..+..+++.++..   +...++.     +...   .....+.+-+++++.+++++++|.|++.-......
T Consensus        60 ~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~  136 (147)
T TIGR01656        60 FSAEAFRAPNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARN  136 (147)
T ss_pred             CCHHHHHHHHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence                      5667777777654   1122222     1111   12235667778889999999999999876655555


Q ss_pred             ceEee
Q psy17244        169 NAIPI  173 (196)
Q Consensus       169 N~I~v  173 (196)
                      .|+..
T Consensus       137 ~Gi~~  141 (147)
T TIGR01656       137 AGLAA  141 (147)
T ss_pred             CCCCE
Confidence            55543

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.62  E-value=6.2e-08  Score=75.68  Aligned_cols=123  Identities=15%  Similarity=0.120  Sum_probs=67.7

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcC-CchhhH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTA-SMEIYG  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~-~~~~ya  109 (196)
                      ++.+|||||.||+.........+.+.+..... .+   .  +..+.-+.+-|++.+.|++|. +..+|++.|. ..++.|
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~-~v---~--D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A   76 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGN-VV---V--DSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWA   76 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS---E---E--ETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCceecCCCC-EE---E--eCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHH
Confidence            56899999999998876554332222222211 11   1  124556899999999999999 6899999996 468899


Q ss_pred             HHHHHHhcCC---------CceeeEEEEecCCCCCC-CCccccccccCCCCCcEEEEECCCccc
Q psy17244        110 AAVADKLDAR---------RHILRRRYYRQHCTPEL-GSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       110 ~~vl~~ldp~---------~~~f~~~l~r~~c~~~~-~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                      +++++.++..         ..+|++.=.-..   .+ ..+.+-.+..|.+.+.++++||.....
T Consensus        77 ~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~  137 (169)
T PF12689_consen   77 RELLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI  137 (169)
T ss_dssp             HHHHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred             HHHHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence            9999998875         124443211111   11 133344446689999999999998654

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=98.62  E-value=2.5e-08  Score=80.27  Aligned_cols=96  Identities=7%  Similarity=0.039  Sum_probs=77.3

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceee-EEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILR-RRYYRQHCTPEL---GSYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|.  +.++|.|++.+.+++.+++..+.. .+|. .+++.++....+   ..|..-++++|.+++++
T Consensus        86 ~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~-~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~  162 (221)
T PRK10563         86 ELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGML-HYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC  162 (221)
T ss_pred             cCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChH-HhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence            3677899999999994  899999999999999999988876 5775 566665554433   36778888899999999


Q ss_pred             EEEECCCccccCCCCceEeecee
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++|+|++.-.......|+.+.-+
T Consensus       163 l~igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        163 ILVDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             EEEeCcHhhHHHHHHCCCEEEEE
Confidence            99999998777666777766544

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=98.62  E-value=3.7e-08  Score=76.87  Aligned_cols=129  Identities=16%  Similarity=0.118  Sum_probs=92.6

Q ss_pred             cceecCCCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHH
Q psy17244         12 VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDI   91 (196)
Q Consensus        12 ~~~~~~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~   91 (196)
                      +.+.+.++..+....+...+-+.+|+|+||||.....                              ...-||+.++|++
T Consensus         5 ~~~~~~~~~~i~~~~~~~~~v~~vv~D~Dgtl~~~~~------------------------------~~~~pgv~e~L~~   54 (170)
T TIGR01668         5 PHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDH------------------------------NEAYPALRDWIEE   54 (170)
T ss_pred             cccccCchhhCCHHHHHHCCCCEEEEecCCccccCCC------------------------------CCcChhHHHHHHH
Confidence            3444556667777777777889999999999985531                              2446999999999


Q ss_pred             hh-hCceEEEEcCCc-hhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCc-cccCCCC
Q psy17244         92 VS-QWYELVVFTASM-EIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPG-AYRGFPD  168 (196)
Q Consensus        92 l~-~~yei~I~T~~~-~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~-~~~~~~~  168 (196)
                      |. +.+.++|.|+++ ...+..+++.++.. .+     . .........+..-++.++.+++++++|+|+.. -......
T Consensus        55 Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~-~~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~  127 (170)
T TIGR01668        55 LKAAGRKLLIVSNNAGEQRAKAVEKALGIP-VL-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNR  127 (170)
T ss_pred             HHHcCCEEEEEeCCchHHHHHHHHHHcCCE-EE-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHH
Confidence            98 569999999998 67787777776643 11     1 12233334667778888999999999999983 5555555


Q ss_pred             ceEeeceec
Q psy17244        169 NAIPIKSWF  177 (196)
Q Consensus       169 N~I~v~~f~  177 (196)
                      +|+...-+.
T Consensus       128 aGi~~i~v~  136 (170)
T TIGR01668       128 NGSYTILVE  136 (170)
T ss_pred             cCCeEEEEc
Confidence            666555444

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01686 FkbH FkbH-like domain

Probab=98.61  E-value=6.6e-08  Score=82.69  Aligned_cols=110  Identities=20%  Similarity=0.135  Sum_probs=78.8

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      .+|+||+|||+||+.-.--..          ....+          ......|++.++|+.|+ +++.++|.|++....|
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~----------g~~~i----------~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a   61 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGED----------GIDNL----------NLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDA   61 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccC----------Ccccc----------ccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHH
Confidence            478999999999996642110          00000          01224789999999998 7899999999999999


Q ss_pred             HHHHHH----hcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccc
Q psy17244        110 AAVADK----LDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       110 ~~vl~~----ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                      ..+++.    +... .+|......  .........+-++.+|.+++.+|+|||++.-.
T Consensus        62 ~~~l~~~~~~~~~~-~~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~  116 (320)
T TIGR01686        62 KKVFERRKDFILQA-EDFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER  116 (320)
T ss_pred             HHHHHhCccccCcH-HHeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence            999998    6655 456554322  12222355677788899999999999999744

The C-terminal portion of this domain is unique to this family (by BLAST).

>PHA02597 30

Probab=98.58  E-value=2.6e-08  Score=78.87  Aligned_cols=99  Identities=9%  Similarity=0.108  Sum_probs=72.7

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCC---ceeeEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARR---HILRRRYYRQHCTPELGSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~---~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i  154 (196)
                      .+...||+.++|+.|.+.+.+++-|++.......+.+.+...+   .+|+.+++.+........+.+-++++|  ++.+|
T Consensus        72 ~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v  149 (197)
T PHA02597         72 YLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVC  149 (197)
T ss_pred             hccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEE
Confidence            3668999999999999777787777776655555666554331   256777777766544445666777788  78899


Q ss_pred             EEECCCccccCCCCc--eEeeceecC
Q psy17244        155 ILDNSPGAYRGFPDN--AIPIKSWFS  178 (196)
Q Consensus       155 iIDD~~~~~~~~~~N--~I~v~~f~~  178 (196)
                      +|||+.........+  ||.+..+..
T Consensus       150 ~vgDs~~di~aA~~a~~Gi~~i~~~~  175 (197)
T PHA02597        150 FVDDLAHNLDAAHEALSQLPVIHMLR  175 (197)
T ss_pred             EeCCCHHHHHHHHHHHcCCcEEEecc
Confidence            999999988777788  888777753

2 hypothetical protein; Provisional

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=98.54  E-value=2.6e-07  Score=72.50  Aligned_cols=117  Identities=15%  Similarity=0.006  Sum_probs=77.5

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch----
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME----  106 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~----  106 (196)
                      .|.++||+||||+.....-        ..              ..-.+...||+.++|++|+ +.+.++|.|+++.    
T Consensus         3 ~~~~~~d~~~t~~~~~~~~--------~~--------------~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~   60 (181)
T PRK08942          3 MKAIFLDRDGVINVDSDGY--------VK--------------SPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARG   60 (181)
T ss_pred             ccEEEEECCCCcccCCccc--------cC--------------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCC
Confidence            5789999999986553110        00              0012567899999999998 4799999999873    


Q ss_pred             -----------hhHHHHHHHhcCCCceeeEEEEecCC-----CCCC---CCccccccccCCCCCcEEEEECCCccccCCC
Q psy17244        107 -----------IYGAAVADKLDARRHILRRRYYRQHC-----TPEL---GSYTKDLSAISPDLSSIFILDNSPGAYRGFP  167 (196)
Q Consensus       107 -----------~ya~~vl~~ldp~~~~f~~~l~r~~c-----~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~  167 (196)
                                 .+...+++.++.   .|..+++...+     ...+   ..+.+-++.+|.+++++++|+|++.-.....
T Consensus        61 ~~~~~~~~~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~  137 (181)
T PRK08942         61 LFTEAQLNALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAA  137 (181)
T ss_pred             cCCHHHHHHHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHH
Confidence                       333344444432   35566654322     2222   2567788888999999999999997665555


Q ss_pred             CceEee
Q psy17244        168 DNAIPI  173 (196)
Q Consensus       168 ~N~I~v  173 (196)
                      ..|+.+
T Consensus       138 ~aG~~~  143 (181)
T PRK08942        138 AAGVTP  143 (181)
T ss_pred             HCCCeE
Confidence            555543

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.51  E-value=6.4e-08  Score=81.54  Aligned_cols=128  Identities=11%  Similarity=0.032  Sum_probs=94.8

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      .+++.+++|+||||........          .++.         ...-....|++.++|+.+. +.+.++|.|+.+...
T Consensus       156 ~~~~~~~~D~dgtl~~~~~~~~----------~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~  216 (300)
T PHA02530        156 GLPKAVIFDIDGTLAKMGGRSP----------YDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVC  216 (300)
T ss_pred             CCCCEEEEECCCcCcCCCCCCc----------cchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhh
Confidence            3567999999999997753211          0110         0012466999999999997 579999999999999


Q ss_pred             HHHHHHHhcCCCceeeEEEEecC-------CCCCCC---CccccccccCC-CCCcEEEEECCCccccCCCCceEeecee
Q psy17244        109 GAAVADKLDARRHILRRRYYRQH-------CTPELG---SYTKDLSAISP-DLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       109 a~~vl~~ldp~~~~f~~~l~r~~-------c~~~~~---~~~KdL~~l~~-~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++.+++.++..+.+|+.+...+.       +...++   ...+.|..++. +++.++.|||++........+|+.+...
T Consensus       217 ~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v  295 (300)
T PHA02530        217 EEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV  295 (300)
T ss_pred             HHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence            99999999987447877766652       222222   34556677777 6799999999999888888899887665

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.50  E-value=9e-07  Score=68.91  Aligned_cols=108  Identities=21%  Similarity=0.250  Sum_probs=72.1

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh--
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI--  107 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~--  107 (196)
                      ..+.++||+||||+.......     -+.+..              -+..+-||+.+.|+.|. +.+.++|.|+++..  
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~~~-----~~~~~~--------------~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~   72 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSGKV-----FPTSAS--------------DWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGR   72 (166)
T ss_pred             cCcEEEEeCCCceEecCCCCc-----ccCChH--------------HeEEecCCHHHHHHHHHHCCCEEEEEeCCccccc
Confidence            456899999999997642110     001111              12335699999999997 78999999998763  


Q ss_pred             ----------hHHHHHHHhcCCCceeeEEEEecCCCCC---CCCccccccccC--CCCCcEEEEECCC
Q psy17244        108 ----------YGAAVADKLDARRHILRRRYYRQHCTPE---LGSYTKDLSAIS--PDLSSIFILDNSP  160 (196)
Q Consensus       108 ----------ya~~vl~~ldp~~~~f~~~l~r~~c~~~---~~~~~KdL~~l~--~~~~~~iiIDD~~  160 (196)
                                +++.+++.++..  . ...+..+.....   .+.+..-++++|  .+++++++|.|++
T Consensus        73 ~~~~~~~~~~~i~~~l~~~gl~--~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~  137 (166)
T TIGR01664        73 GKLSAESFKNKIEAFLEKLKVP--I-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA  137 (166)
T ss_pred             CcccHHHHHHHHHHHHHHcCCC--E-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence                      577788888864  2 233333332222   224555667777  7899999999997

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=98.50  E-value=1.4e-07  Score=75.67  Aligned_cols=98  Identities=9%  Similarity=0.129  Sum_probs=70.6

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec-----------CCCC--CCCCcccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ-----------HCTP--ELGSYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~-----------~c~~--~~~~~~KdL~  144 (196)
                      +..+||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+..+..+           .+..  ....+.+-++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~  162 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD-AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR  162 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC-ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence            568999999999998 57999999999999999999998876 3665433211           1111  1113445566


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +++.+++++++|+|+..-.......|+.+ .|.+
T Consensus       163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~~  195 (219)
T TIGR00338       163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFNA  195 (219)
T ss_pred             HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeCC
Confidence            77889999999999987665555555655 3544

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=98.37  E-value=2.5e-07  Score=76.03  Aligned_cols=144  Identities=13%  Similarity=0.063  Sum_probs=83.1

Q ss_pred             cCCCCCeEEEEeCCCceeeeecCCCCC-CCCCCCCCCCcEEEEEECC---eeeEEEEeeCccHHHHHHHhh-hCceEEEE
Q psy17244         27 LSIVKRKVLVLDLDETLIHSHHDGITR-PTVKPGTPPDFVLKVTIDR---HPVRFFVHKRPHVDFFLDIVS-QWYELVVF  101 (196)
Q Consensus        27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~-~~~~~~~~~d~~~~~~~~~---~~~~~~v~~RP~l~eFL~~l~-~~yei~I~  101 (196)
                      +..+++..++|||||||++|...-... ....+. .-.+.+--....   ....-.....|++.+||+++. +.+.++|-
T Consensus        58 ~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~-~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iV  136 (237)
T TIGR01672        58 LEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPG-SEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFV  136 (237)
T ss_pred             cCCCCCeEEEEeCCCccccCcHHHhCCcccCCHH-HhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEE
Confidence            444455599999999999998621000 000000 000000000000   001122344555999999997 68999999


Q ss_pred             cCC----chhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeecee
Q psy17244        102 TAS----MEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       102 T~~----~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      |+.    ...+++.+++.++.. .+|..++..+.....+.  .+. ..+. ...-++.|-|+..-+.....+|+.....
T Consensus       137 Tnr~~~k~~~~a~~ll~~lGi~-~~f~~i~~~d~~~~~Kp--~~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~I~V  210 (237)
T TIGR01672       137 TGRTPGKTDTVSKTLAKNFHIP-AMNPVIFAGDKPGQYQY--TKT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARGIRI  210 (237)
T ss_pred             eCCCCCcCHHHHHHHHHHhCCc-hheeEEECCCCCCCCCC--CHH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCEEEE
Confidence            998    667999999999886 47776666554432221  121 1221 2233799999988776665666654443

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK06769 hypothetical protein; Validated

Probab=98.34  E-value=3.8e-07  Score=71.36  Aligned_cols=97  Identities=11%  Similarity=0.016  Sum_probs=61.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhh-----HHHHHHHhcCCCceeeEEEEe----cCCCCCC---CCccccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIY-----GAAVADKLDARRHILRRRYYR----QHCTPEL---GSYTKDLSA  145 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y-----a~~vl~~ldp~~~~f~~~l~r----~~c~~~~---~~~~KdL~~  145 (196)
                      +..-||+.++|++|. +.+.++|.|++....     .......+... ++.....+.    +.+...+   ..+.+-+++
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~  105 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-GFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK  105 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-CcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence            566899999999997 589999999987421     11222223222 122222221    2222222   367788888


Q ss_pred             cCCCCCcEEEEECCCccccCCCCceEeecee
Q psy17244        146 ISPDLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       146 l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++.+++++++|+|++.-.......|+.+..+
T Consensus       106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v  136 (173)
T PRK06769        106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILV  136 (173)
T ss_pred             cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence            9999999999999997665555555554433

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=98.34  E-value=4.1e-07  Score=79.21  Aligned_cols=145  Identities=23%  Similarity=0.336  Sum_probs=99.6

Q ss_pred             CCCCCeEEEEeCCCceeeeecCCCCCCCC--CCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCc
Q psy17244         28 SIVKRKVLVLDLDETLIHSHHDGITRPTV--KPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASM  105 (196)
Q Consensus        28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~  105 (196)
                      ....+..+|.|+|.|.+|+..........  .-.+.-.+..........+.++++.||++..|+...++.||+.++|.|+
T Consensus        22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~  101 (390)
T COG5190          22 RQDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGT  101 (390)
T ss_pred             hcCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeecc
Confidence            34577889999999999997543100000  0000001111111223457899999999999999999999999999999


Q ss_pred             hhhHHHHHHHhcCCCceeeEEEE-ecCCCCCCCCcccccccc-CCCCCcEEEEECCCccccC--CCCceEeece
Q psy17244        106 EIYGAAVADKLDARRHILRRRYY-RQHCTPELGSYTKDLSAI-SPDLSSIFILDNSPGAYRG--FPDNAIPIKS  175 (196)
Q Consensus       106 ~~ya~~vl~~ldp~~~~f~~~l~-r~~c~~~~~~~~KdL~~l-~~~~~~~iiIDD~~~~~~~--~~~N~I~v~~  175 (196)
                      ..||+.++..+||.+..|..+.. ++.   ..+...|-++++ ..+.+.++++||.+..|..  --.|.+...+
T Consensus       102 ~~~~~~~~~i~d~~g~~~~d~~~~~~~---~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~  172 (390)
T COG5190         102 RAYAERIAKIIDPTGKLFNDRILSRDE---SGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP  172 (390)
T ss_pred             ccchhhhhhcccccccccccccccccc---cccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence            99999999999999888875543 322   122345677777 4577889999999999922  2245555555

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=98.33  E-value=4.1e-07  Score=69.19  Aligned_cols=95  Identities=14%  Similarity=0.168  Sum_probs=79.7

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~  152 (196)
                      ......||+.++|+.++ +.+.++|.|+++...+..+++.++.. .+|+.+++.+++...++   .|..-++.+|.++++
T Consensus        74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~  152 (176)
T PF13419_consen   74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE  152 (176)
T ss_dssp             GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred             hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence            45889999999999999 89999999999999999999999887 68999988877766544   567788888999999


Q ss_pred             EEEEECCCccccCCCCceEe
Q psy17244        153 IFILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~  172 (196)
                      +++|||++.........|+.
T Consensus       153 ~~~vgD~~~d~~~A~~~G~~  172 (176)
T PF13419_consen  153 ILFVGDSPSDVEAAKEAGIK  172 (176)
T ss_dssp             EEEEESSHHHHHHHHHTTSE
T ss_pred             EEEEeCCHHHHHHHHHcCCe
Confidence            99999999765544444443

...

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=98.27  E-value=9.6e-07  Score=72.75  Aligned_cols=99  Identities=9%  Similarity=0.105  Sum_probs=83.8

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|++|. +.+.++|-|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-+++++.+++++
T Consensus       106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~  184 (248)
T PLN02770        106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHT  184 (248)
T ss_pred             cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHE
Confidence            4677899999999996 68999999999999999999999987 68999988887755443   6788889999999999


Q ss_pred             EEEECCCccccCCCCceEeeceec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      ++|+|++.-......+|+.+..+.
T Consensus       185 l~vgDs~~Di~aA~~aGi~~i~v~  208 (248)
T PLN02770        185 FVFEDSVSGIKAGVAAGMPVVGLT  208 (248)
T ss_pred             EEEcCCHHHHHHHHHCCCEEEEEe
Confidence            999999987766667777666553

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=98.24  E-value=1.3e-06  Score=71.02  Aligned_cols=93  Identities=10%  Similarity=-0.023  Sum_probs=78.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.|. +.+.++|-|++.+.+++..++.++.. .+|+.+++.+.....++   .|.+-++++|.++++++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l  170 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL  170 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence            677899999999998 57999999999999999999988775 58888887776654443   56777889999999999


Q ss_pred             EEECCCccccCCCCceEe
Q psy17244        155 ILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~  172 (196)
                      +|+|++.-......+|+.
T Consensus       171 ~igDs~~di~aA~~aG~~  188 (224)
T PRK14988        171 FIDDSEPILDAAAQFGIR  188 (224)
T ss_pred             EEcCCHHHHHHHHHcCCe
Confidence            999999877777777774

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=98.23  E-value=1.5e-06  Score=70.28  Aligned_cols=95  Identities=14%  Similarity=0.068  Sum_probs=76.5

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ...-||+.+.|..++ +.|.+.|.|+.....++.+++.++.. .+|+.+...+.+...++   ....-+..+|.+++++|
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l  166 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLA-DYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL  166 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence            568899999999998 78999999999999999999999998 68988887444444443   34566677888878999


Q ss_pred             EEECCCccccCCCCceEeec
Q psy17244        155 ILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~  174 (196)
                      +|=|+..-......+|+...
T Consensus       167 ~VGDs~~Di~aA~~Ag~~~v  186 (220)
T COG0546         167 MVGDSLNDILAAKAAGVPAV  186 (220)
T ss_pred             EECCCHHHHHHHHHcCCCEE
Confidence            99999987766666665433

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=98.22  E-value=5.6e-06  Score=69.06  Aligned_cols=125  Identities=18%  Similarity=0.113  Sum_probs=84.5

Q ss_pred             cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCc
Q psy17244         27 LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASM  105 (196)
Q Consensus        27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~  105 (196)
                      .....+-.+|||||.|||.+....                            -..=|.+-+-|.+|.+ +.-+++||.|.
T Consensus       117 ~~~~~phVIVfDlD~TLItd~~~v----------------------------~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~  168 (297)
T PF05152_consen  117 LVWEPPHVIVFDLDSTLITDEGDV----------------------------RIRDPAVYDSLRELKEQGCVLVLWSYGN  168 (297)
T ss_pred             ccCCCCcEEEEECCCcccccCCcc----------------------------ccCChHHHHHHHHHHHcCCEEEEecCCC
Confidence            334455589999999999876421                            1223788899999984 66999999999


Q ss_pred             hhhHHHHHHHhcCCCceeeEEEEecCCCCCC----------------CCccccccc-----------------cCCC-CC
Q psy17244        106 EIYGAAVADKLDARRHILRRRYYRQHCTPEL----------------GSYTKDLSA-----------------ISPD-LS  151 (196)
Q Consensus       106 ~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~----------------~~~~KdL~~-----------------l~~~-~~  151 (196)
                      +++|...++.++.. ++|..++++.+-....                ..+..|...                 .|.+ .+
T Consensus       169 ~eHV~~sl~~~~L~-~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~K  247 (297)
T PF05152_consen  169 REHVRHSLKELKLE-GYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFK  247 (297)
T ss_pred             HHHHHHHHHHhCCc-cccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceee
Confidence            99999999999988 6898888755332221                112223322                 2332 23


Q ss_pred             cEEEEECCCccccCCCCceEeeceecCCCC
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPS  181 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~  181 (196)
                      .+-+|||-+.. ..+-+|-+.|..--...+
T Consensus       248 tiTLVDDL~~N-n~~YD~FVnvkrcp~P~~  276 (297)
T PF05152_consen  248 TITLVDDLKSN-NYSYDYFVNVKRCPVPVN  276 (297)
T ss_pred             eEEEeccCccc-CccceeEEEeccCCCCch
Confidence            56789998864 234477777776654333

>KOG3109|consensus

Probab=98.21  E-value=1.6e-06  Score=69.79  Aligned_cols=89  Identities=12%  Similarity=0.179  Sum_probs=72.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCC---------CCCCCccccccccCCC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCT---------PELGSYTKDLSAISPD  149 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~---------~~~~~~~KdL~~l~~~  149 (196)
                      ++.-|-|+++|-.|.+.. .++||+|.+..|..++..|+.. .+|..+.+.+...         .....|.+-.+..|.+
T Consensus        99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGie-DcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~  176 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIE-DCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID  176 (244)
T ss_pred             cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChH-HhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence            677788999999998766 9999999999999999999998 6898888765333         3334667777777876


Q ss_pred             -CCcEEEEECCCccccCCCCc
Q psy17244        150 -LSSIFILDNSPGAYRGFPDN  169 (196)
Q Consensus       150 -~~~~iiIDD~~~~~~~~~~N  169 (196)
                       +++|+++|||........+=
T Consensus       177 ~p~~t~FfDDS~~NI~~ak~v  197 (244)
T KOG3109|consen  177 SPRNTYFFDDSERNIQTAKEV  197 (244)
T ss_pred             CcCceEEEcCchhhHHHHHhc
Confidence             99999999999877654433

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=98.20  E-value=1.8e-06  Score=69.17  Aligned_cols=98  Identities=11%  Similarity=0.098  Sum_probs=79.0

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      ++.+.||+.++|++|. +.+.++|.|++...++...++.++.. .+|+.+++.+.....++   .|.+-++++|.+++++
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  170 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA  170 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence            4678999999999998 56999999999999999999999886 68988888877665443   6778889999999999


Q ss_pred             EEEECCC-ccccCCCCceEeecee
Q psy17244        154 FILDNSP-GAYRGFPDNAIPIKSW  176 (196)
Q Consensus       154 iiIDD~~-~~~~~~~~N~I~v~~f  176 (196)
                      |+|+|++ .-.......|+.+.-+
T Consensus       171 ~~igDs~~~di~~A~~aG~~~i~~  194 (221)
T TIGR02253       171 VMVGDRLDKDIKGAKNLGMKTVWI  194 (221)
T ss_pred             EEECCChHHHHHHHHHCCCEEEEE
Confidence            9999998 4554444555544433

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.20  E-value=4.6e-07  Score=70.57  Aligned_cols=88  Identities=9%  Similarity=0.137  Sum_probs=62.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-----------------CCCCcc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-----------------ELGSYT  140 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-----------------~~~~~~  140 (196)
                      +.++||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|..+++.+....                 ......
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~  149 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK-DVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC  149 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh-hheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence            689999999999997 57999999999999999999998765 57777765432111                 111112


Q ss_pred             c--cccccCCC-CCcEEEEECCCccccCCC
Q psy17244        141 K--DLSAISPD-LSSIFILDNSPGAYRGFP  167 (196)
Q Consensus       141 K--dL~~l~~~-~~~~iiIDD~~~~~~~~~  167 (196)
                      |  -++.+... ++++|+|+|+..-.....
T Consensus       150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~  179 (188)
T TIGR01489       150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAK  179 (188)
T ss_pred             HHHHHHHHHhhcCceEEEECCCcchhchHh
Confidence            3  33333334 788999999997665443

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=98.19  E-value=2e-06  Score=68.41  Aligned_cols=98  Identities=7%  Similarity=-0.031  Sum_probs=81.1

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|++|. +.+.++|.|++...++..+++.++.. .+|+.+++.+++...+   ..+.+-++++|.+++++
T Consensus        73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~  151 (205)
T TIGR01454        73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL-PLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA  151 (205)
T ss_pred             ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh-hheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence            4678999999999997 68999999999999999999999887 5888888877664433   25667788889999999


Q ss_pred             EEEECCCccccCCCCceEeecee
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++|+|++.-......+|+.+...
T Consensus       152 l~igD~~~Di~aA~~~Gi~~i~~  174 (205)
T TIGR01454       152 VMVGDAVTDLASARAAGTATVAA  174 (205)
T ss_pred             EEEcCCHHHHHHHHHcCCeEEEE
Confidence            99999997777777777765543

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=98.19  E-value=1.5e-06  Score=67.32  Aligned_cols=92  Identities=15%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.++ +.+.++|.|++.... ..+...++.. .+|+.+++.+.+...+   ..|..-++++|.++++++
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~  161 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL  161 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence            678999999999998 589999999999998 6666667776 5788888776665544   256777888899999999


Q ss_pred             EEECCCccccCCCCceEe
Q psy17244        155 ILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~  172 (196)
                      +|||++.........|+.
T Consensus       162 ~vgD~~~di~aA~~~G~~  179 (183)
T TIGR01509       162 FVDDSPAGIEAAKAAGMH  179 (183)
T ss_pred             EEcCCHHHHHHHHHcCCE
Confidence            999999766555555553

HAD subfamilies caused by an overly broad single model.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=98.18  E-value=1.5e-06  Score=69.01  Aligned_cols=104  Identities=15%  Similarity=0.110  Sum_probs=82.1

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      +....||+.++|+.+. +.+.++|-|++....+..++.....-..+|+.+++.+++...++   .|..-++++|.+++++
T Consensus        82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~  161 (199)
T PRK09456         82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA  161 (199)
T ss_pred             HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence            3567999999999997 67999999999988776655442211257888888887776544   6778889999999999


Q ss_pred             EEEECCCccccCCCCceEeeceecCCCC
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWFSDPS  181 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~~~~~  181 (196)
                      ++|||++.........|+....+.+...
T Consensus       162 l~vgD~~~di~aA~~aG~~~i~~~~~~~  189 (199)
T PRK09456        162 VFFDDNADNIEAANALGITSILVTDKQT  189 (199)
T ss_pred             EEeCCCHHHHHHHHHcCCEEEEecCCcc
Confidence            9999999887777788998877766433

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.16  E-value=4e-06  Score=67.70  Aligned_cols=95  Identities=12%  Similarity=0.101  Sum_probs=63.6

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC-CceeeEE--EEecCCCCCC------------C-Ccc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR-RHILRRR--YYRQHCTPEL------------G-SYT  140 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~-~~~f~~~--l~r~~c~~~~------------~-~~~  140 (196)
                      .+.++||+.+||+++. +.+.++|.|++...+++.+++.+ .. ..++...  +..+.....+            + ...
T Consensus        72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~  150 (219)
T PRK09552         72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP  150 (219)
T ss_pred             CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence            3688999999999998 67999999999999999999987 32 1243222  2111111000            0 112


Q ss_pred             ccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        141 KDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       141 KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .-++.++...+++|.|.|+..-.......++.+
T Consensus       151 ~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~  183 (219)
T PRK09552        151 SLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF  183 (219)
T ss_pred             HHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence            455566778889999999987665444455533

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=98.12  E-value=1.8e-06  Score=68.22  Aligned_cols=96  Identities=10%  Similarity=0.096  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|++|++ .+.++|.|++...++..+++.++.. .+|+.+++.++....++   .|..-++++|.++++++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~  169 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL  169 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence            5678999999999996 6999999999999999999998875 58998888876654433   56778888999999999


Q ss_pred             EEECCCccccCCCCceEeece
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~  175 (196)
                      +|+|++.-......+|+...-
T Consensus       170 ~vgD~~~Di~~A~~~G~~~i~  190 (198)
T TIGR01428       170 FVASNPWDLGGAKKFGFKTAW  190 (198)
T ss_pred             EEeCCHHHHHHHHHCCCcEEE
Confidence            999999766555666665443

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=98.12  E-value=2.5e-06  Score=67.92  Aligned_cols=99  Identities=8%  Similarity=-0.021  Sum_probs=80.7

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|. +.+.++|.|++...+++.+++.++.. .+|..++..+.....++   .+.+-++++|.+++++
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~  161 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM  161 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence            4678999999999997 67999999999999999999999886 57887777665443332   5677888899999999


Q ss_pred             EEEECCCccccCCCCceEeeceec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      ++|+|++.-.......|+.+..+.
T Consensus       162 ~~igDs~~d~~aa~~aG~~~i~v~  185 (213)
T TIGR01449       162 VYVGDSRVDIQAARAAGCPSVLLT  185 (213)
T ss_pred             EEeCCCHHHHHHHHHCCCeEEEEc
Confidence            999999987766666777665543

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=98.09  E-value=1.4e-06  Score=68.24  Aligned_cols=92  Identities=13%  Similarity=0.175  Sum_probs=75.0

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-------CCCCccccccccCCCCC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-------ELGSYTKDLSAISPDLS  151 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-------~~~~~~KdL~~l~~~~~  151 (196)
                      +...||+.++|++|.  +.++|.|+++...+..+++.++.. .+|+.++..+....       +...|..-++++|.+++
T Consensus        83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~  159 (184)
T TIGR01993        83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE  159 (184)
T ss_pred             CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence            457899999999998  689999999999999999999876 68998888766543       23367788888999999


Q ss_pred             cEEEEECCCccccCCCCceEee
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      ++++|+|++........+|+.+
T Consensus       160 ~~l~vgD~~~di~aA~~~G~~~  181 (184)
T TIGR01993       160 RAIFFDDSARNIAAAKALGMKT  181 (184)
T ss_pred             ceEEEeCCHHHHHHHHHcCCEE
Confidence            9999999997665555666543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.08  E-value=1.8e-05  Score=68.73  Aligned_cols=124  Identities=16%  Similarity=0.124  Sum_probs=82.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-----
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-----  104 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-----  104 (196)
                      +++.|+||-||||+......             |..       .....+...||+.++|++|. +.+.++|.|+.     
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~-------------y~~-------~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~   60 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTD-------------FQV-------DSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGT   60 (354)
T ss_pred             CCcEEEEeCCCCccCCCCcc-------------ccc-------cCcccceECcCHHHHHHHHHhCCCeEEEEECCccccC
Confidence            46799999999999875211             000       01123788999999999998 57999999995     


Q ss_pred             ----------chhhHHHHHHHhcCCCceeeEEEEe-----cCCCCCCC---CccccccccCCCCCcEEEEECCCccccCC
Q psy17244        105 ----------MEIYGAAVADKLDARRHILRRRYYR-----QHCTPELG---SYTKDLSAISPDLSSIFILDNSPGAYRGF  166 (196)
Q Consensus       105 ----------~~~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~~~~~~~~  166 (196)
                                ...++..+++.++..   |..+++.     +.|...++   .+..-++.++.+++++++|-|+..-....
T Consensus        61 ~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA  137 (354)
T PRK05446         61 DSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA  137 (354)
T ss_pred             ccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH
Confidence                      244555566665542   5555443     34433332   33344556688999999999998766666


Q ss_pred             CCceEeeceec
Q psy17244        167 PDNAIPIKSWF  177 (196)
Q Consensus       167 ~~N~I~v~~f~  177 (196)
                      ..+|+...-..
T Consensus       138 k~aGi~~I~v~  148 (354)
T PRK05446        138 ENMGIKGIRYA  148 (354)
T ss_pred             HHCCCeEEEEE
Confidence            66666655443

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=98.07  E-value=3.6e-06  Score=67.36  Aligned_cols=96  Identities=8%  Similarity=0.058  Sum_probs=78.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---Ccccccccc-CCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAI-SPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l-~~~~~~~i  154 (196)
                      +..+||+.++|+++.+.+.++|-|++....+..+++.++.. .+|+.+++.+.+...++   .+.+-++++ |.+++++|
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v  174 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL  174 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence            67899999999999966999999999999999999998876 58999888777665443   577888899 99999999


Q ss_pred             EEECCC-ccccCCCCceEeece
Q psy17244        155 ILDNSP-GAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I~v~~  175 (196)
                      +|+|++ .-......+|+...-
T Consensus       175 ~igD~~~~di~~A~~~G~~~i~  196 (224)
T TIGR02254       175 MIGDSLTADIKGGQNAGLDTCW  196 (224)
T ss_pred             EECCCcHHHHHHHHHCCCcEEE
Confidence            999997 455555555654433

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.06  E-value=4.5e-06  Score=64.04  Aligned_cols=111  Identities=12%  Similarity=0.087  Sum_probs=74.8

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.++||+||||+.....-                  ..++ +..-.+.++|+.  -+++|. +.+.++|-|+.....+..
T Consensus         2 ~~~~~D~Dgtl~~~~~~~------------------~~~~-~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~   60 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYY------------------TNNG-EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVED   60 (154)
T ss_pred             eEEEEeCceeEEcCeEEE------------------CCCC-cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHH
Confidence            578999999999643100                  0000 111224677776  788887 689999999999999999


Q ss_pred             HHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244        112 VADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       112 vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      +++.++.. .+|..      .......+.+-++.+|.++++++.|-|+..-.......++
T Consensus        61 ~l~~~gi~-~~~~~------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~  113 (154)
T TIGR01670        61 RCKTLGIT-HLYQG------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL  113 (154)
T ss_pred             HHHHcCCC-EEEec------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence            99999876 45542      1112224445567778899999999999875544333333

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK09449 dUMP phosphatase; Provisional

Probab=98.04  E-value=4.9e-06  Score=66.98  Aligned_cols=94  Identities=10%  Similarity=0.079  Sum_probs=76.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCC-CCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISP-DLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~-~~~~~i  154 (196)
                      +...||+.++|+.|.+.+.++|-|++....++..++.++.. .+|+.+++.+++...++   .+.+-++++|. ++++++
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  172 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLR-DYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL  172 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence            56889999999999988999999999999999999998876 58999988887765543   67788888986 458999


Q ss_pred             EEECCCc-cccCCCCceEee
Q psy17244        155 ILDNSPG-AYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~-~~~~~~~N~I~v  173 (196)
                      +|+|++. -......+|+.+
T Consensus       173 ~vgD~~~~Di~~A~~aG~~~  192 (224)
T PRK09449        173 MVGDNLHSDILGGINAGIDT  192 (224)
T ss_pred             EEcCCcHHHHHHHHHCCCcE
Confidence            9999984 555555555543

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.00  E-value=2e-05  Score=71.66  Aligned_cols=111  Identities=17%  Similarity=0.192  Sum_probs=75.8

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch--
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME--  106 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~--  106 (196)
                      .+.+++.||+||||+.......     -+....|              +..+-||+.+.|+.|. +.|.|+|+|+...  
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~~-----~~~~~~d--------------~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~  226 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGKV-----FPKGPDD--------------WQIIFPEIPEKLKELEADGFKICIFTNQGGIA  226 (526)
T ss_pred             ccCcEEEEECCCCccccCCCcc-----CCCCHHH--------------eeecccCHHHHHHHHHHCCCEEEEEECCcccc
Confidence            3568999999999997642110     0111111              2335699999999998 6899999999776  


Q ss_pred             ----------hhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCcccccccc----CCCCCcEEEEECCCcc
Q psy17244        107 ----------IYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAI----SPDLSSIFILDNSPGA  162 (196)
Q Consensus       107 ----------~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l----~~~~~~~iiIDD~~~~  162 (196)
                                ..+..+++.++..   |...+..+.|.+.+   +++..-++.+    +.+++++++|-|+..-
T Consensus       227 ~G~~~~~~~~~ki~~iL~~lgip---fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr  296 (526)
T TIGR01663       227 RGKINADDFKAKIEAIVAKLGVP---FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGR  296 (526)
T ss_pred             cCcccHHHHHHHHHHHHHHcCCc---eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccc
Confidence                      4688888888753   66555555555443   2443333444    4789999999999854

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=97.98  E-value=3.5e-06  Score=65.53  Aligned_cols=92  Identities=7%  Similarity=0.049  Sum_probs=74.9

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.|. +.+.++|-|++  .+++.+++.++.. .+|+.++..+.+...++   .+.+-+++++.+++++|
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v  163 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT-DYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV  163 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH-HHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            678999999999997 57999999988  7899999988876 57888888776654433   45677788899999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|+|++.-......+|+.+
T Consensus       164 ~IgD~~~di~aA~~~G~~~  182 (185)
T TIGR02009       164 VFEDALAGVQAARAAGMFA  182 (185)
T ss_pred             EEeCcHhhHHHHHHCCCeE
Confidence            9999998776666666654

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.95  E-value=2.3e-05  Score=64.49  Aligned_cols=137  Identities=14%  Similarity=0.127  Sum_probs=77.5

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCC-CCCCCCCCCCCcEEEE-EE-C--CeeeEEEEeeCccHHHHHHHhh-hCceEEEEc
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGIT-RPTVKPGTPPDFVLKV-TI-D--RHPVRFFVHKRPHVDFFLDIVS-QWYELVVFT  102 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~-~~~~~~~~~~d~~~~~-~~-~--~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T  102 (196)
                      .+++..++||+|||+++++..... ...+.++ ..+| +.- .. +  ...........||+.+||+.+. +.++|++-|
T Consensus        60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~-~~~y-~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVT  137 (237)
T PRK11009         60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPG-SEDY-LKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFIT  137 (237)
T ss_pred             CCCCcEEEEECcCccccCCchheeeeeccCCC-cccc-cChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEe
Confidence            344569999999999997532110 0111111 1111 000 00 0  0012334566777999999995 899999999


Q ss_pred             CC----chhhHHHHHHHhcC-CCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        103 AS----MEIYGAAVADKLDA-RRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       103 ~~----~~~ya~~vl~~ldp-~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +.    ....++.+++.++. ...+|..++..+.. ..... ..-++    ...-+|+|-|+..-+.....+|+..
T Consensus       138 nR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~K-~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~~  207 (237)
T PRK11009        138 GRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYTK-TQWLK----KKNIRIFYGDSDNDITAAREAGARG  207 (237)
T ss_pred             CCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCCH-HHHHH----hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence            94    46688888887766 12467655555432 11111 11111    2233899999987766555555544

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=97.95  E-value=8.5e-06  Score=67.00  Aligned_cols=98  Identities=6%  Similarity=-0.090  Sum_probs=80.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee-eEEEEecCCCCCCC---CccccccccCCC-CCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL-RRRYYRQHCTPELG---SYTKDLSAISPD-LSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f-~~~l~r~~c~~~~~---~~~KdL~~l~~~-~~~  152 (196)
                      +...||+.++|++|. +.+.++|-|++...+++.+++.++.. .+| +.+++.+.....++   .+.+-++++|.. +++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~-~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~  176 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ-GYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA  176 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc-CCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence            577899999999997 67999999999999999999999876 454 77787776554433   677888889974 899


Q ss_pred             EEEEECCCccccCCCCceEeeceec
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +|+|.|++.-......+|+.+....
T Consensus       177 ~l~IGDs~~Di~aA~~aGi~~i~v~  201 (253)
T TIGR01422       177 CVKVGDTVPDIEEGRNAGMWTVGLI  201 (253)
T ss_pred             eEEECCcHHHHHHHHHCCCeEEEEe
Confidence            9999999987777777787766664

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.91  E-value=8.3e-06  Score=64.67  Aligned_cols=86  Identities=9%  Similarity=0.107  Sum_probs=59.0

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec-CC---CCC--CC-CccccccccCCCC
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ-HC---TPE--LG-SYTKDLSAISPDL  150 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~-~c---~~~--~~-~~~KdL~~l~~~~  150 (196)
                      .+...||+.++|+.+.+.+.++|-|++...+++.+++.++.. .+|...+.-+ ..   ...  .+ ....-++.++...
T Consensus        66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~  144 (205)
T PRK13582         66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWP-TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG  144 (205)
T ss_pred             hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCc-hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence            356789999999999855999999999999999999998875 4665443221 10   000  11 1112233344556


Q ss_pred             CcEEEEECCCcccc
Q psy17244        151 SSIFILDNSPGAYR  164 (196)
Q Consensus       151 ~~~iiIDD~~~~~~  164 (196)
                      ++++.|-|+..-..
T Consensus       145 ~~~v~iGDs~~D~~  158 (205)
T PRK13582        145 YRVIAAGDSYNDTT  158 (205)
T ss_pred             CeEEEEeCCHHHHH
Confidence            88999999997543

>PLN02954 phosphoserine phosphatase

Probab=97.88  E-value=3.2e-05  Score=62.22  Aligned_cols=91  Identities=7%  Similarity=0.051  Sum_probs=60.1

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEEecC-------------CCC-CCC-Cccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYYRQH-------------CTP-ELG-SYTK  141 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~r~~-------------c~~-~~~-~~~K  141 (196)
                      ..++||+.++|+.+. +.+.++|-|++...+++.+++.++... .+|...+..+.             |.. .+. ...+
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~  162 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH  162 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence            457899999999997 679999999999999999999987642 36654332111             110 011 1112


Q ss_pred             cccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244        142 DLSAISPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       142 dL~~l~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      -++.++  .+++|+|-|+..-......+++
T Consensus       163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~  190 (224)
T PLN02954        163 IKKKHG--YKTMVMIGDGATDLEARKPGGA  190 (224)
T ss_pred             HHHHcC--CCceEEEeCCHHHHHhhhcCCC
Confidence            222233  4789999999987765444334

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=97.88  E-value=4.8e-06  Score=66.46  Aligned_cols=100  Identities=9%  Similarity=-0.029  Sum_probs=75.1

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhh--HHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCC
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIY--GAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLS  151 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y--a~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~  151 (196)
                      .+...||+.++|++|. +.+.++|.|++....  +...+...+.. .+|+.++..+.+...+   ..|..-++++|.+++
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~  170 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE  170 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence            4668999999999998 579999999987655  33333333333 5788887766554433   367788899999999


Q ss_pred             cEEEEECCCccccCCCCceEeeceecC
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      ++++|||++.........|+....+.+
T Consensus       171 ~~l~i~D~~~di~aA~~aG~~~i~v~~  197 (211)
T TIGR02247       171 ECVFLDDLGSNLKPAAALGITTIKVSD  197 (211)
T ss_pred             HeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence            999999999887777778887776654

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.78  E-value=2.3e-05  Score=63.73  Aligned_cols=100  Identities=12%  Similarity=0.056  Sum_probs=74.1

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh---cCCCceeeEEEEecCCCC-CCCCccccccccCCCCC
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL---DARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDLS  151 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l---dp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~~  151 (196)
                      ....+.||+.++|+++. +.+.++|+|+++....+.+++..   +.. .+|+..+....+.. +...|.+-++++|.+++
T Consensus        92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~  170 (220)
T TIGR01691        92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPR  170 (220)
T ss_pred             cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChh
Confidence            34568999999999997 68999999999999999888875   322 35655443222221 22377888999999999


Q ss_pred             cEEEEECCCccccCCCCceEeeceec
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      ++++|+|++.-.......|+.+.-..
T Consensus       171 e~lfVgDs~~Di~AA~~AG~~ti~v~  196 (220)
T TIGR01691       171 EILFLSDIINELDAARKAGLHTGQLV  196 (220)
T ss_pred             HEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence            99999999987666666666654443

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=97.78  E-value=3.9e-05  Score=61.57  Aligned_cols=94  Identities=10%  Similarity=0.057  Sum_probs=79.1

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      .+..-|++.++|+.+.+.|.++|.|+|...++...+..++.. .+|+.+++.+..+..++   .|..-++++|.++++++
T Consensus        97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l  175 (229)
T COG1011          97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL  175 (229)
T ss_pred             hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence            378889999999999866999999999999999999999965 79999999888876553   67888999999999999


Q ss_pred             EEECCCccc-cCCCCceEe
Q psy17244        155 ILDNSPGAY-RGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~-~~~~~N~I~  172 (196)
                      +|||+...- .....-|+.
T Consensus       176 ~VgD~~~~di~gA~~~G~~  194 (229)
T COG1011         176 FVGDSLENDILGARALGMK  194 (229)
T ss_pred             EECCChhhhhHHHHhcCcE
Confidence            999999866 333344443

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=97.74  E-value=2.5e-05  Score=62.66  Aligned_cols=94  Identities=13%  Similarity=0.070  Sum_probs=74.5

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      ....+||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+..+..+.+...++   .+.+-+++++.+++++
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~  169 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM  169 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence            4678999999999998 57999999999999999999999876 57877666655443322   4567778889999999


Q ss_pred             EEEECCCccccCCCCceEe
Q psy17244        154 FILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~  172 (196)
                      ++|+|++.-.......|+.
T Consensus       170 i~igD~~~Di~~a~~~g~~  188 (226)
T PRK13222        170 LFVGDSRNDIQAARAAGCP  188 (226)
T ss_pred             EEECCCHHHHHHHHHCCCc
Confidence            9999998766555555553

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.74  E-value=4e-05  Score=63.65  Aligned_cols=99  Identities=7%  Similarity=-0.106  Sum_probs=78.6

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCC-CCcE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPD-LSSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~-~~~~  153 (196)
                      +..-||+.++|+.|. +.+.++|-|++....+..+++.++..+..++.+++.++....+   ..+.+-++++|.. ++++
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~  179 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC  179 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence            567899999999997 6899999999999999999998776532347777777655443   2677888889975 6999


Q ss_pred             EEEECCCccccCCCCceEeeceec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      |+|+|++.-......+|+.+....
T Consensus       180 l~IGDs~~Di~aA~~aG~~~i~v~  203 (267)
T PRK13478        180 VKVDDTVPGIEEGLNAGMWTVGVI  203 (267)
T ss_pred             EEEcCcHHHHHHHHHCCCEEEEEc
Confidence            999999987777777777665554

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.74  E-value=3.9e-05  Score=59.35  Aligned_cols=124  Identities=18%  Similarity=0.211  Sum_probs=89.2

Q ss_pred             CCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCc
Q psy17244         18 PLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWY   96 (196)
Q Consensus        18 ~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~y   96 (196)
                      .+.-+.+..+...+-+.+|+|||+|||-=...                              ..-|-+.+-+.++. +..
T Consensus        14 tv~~i~~~~L~~~Gikgvi~DlDNTLv~wd~~------------------------------~~tpe~~~W~~e~k~~gi   63 (175)
T COG2179          14 TVFDITPDILKAHGIKGVILDLDNTLVPWDNP------------------------------DATPELRAWLAELKEAGI   63 (175)
T ss_pred             hHhhCCHHHHHHcCCcEEEEeccCceecccCC------------------------------CCCHHHHHHHHHHHhcCC
Confidence            44445556777789999999999999954321                              22588899999998 579


Q ss_pred             eEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCc--cccCCC--CceEe
Q psy17244         97 ELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPG--AYRGFP--DNAIP  172 (196)
Q Consensus        97 ei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~--~~~~~~--~N~I~  172 (196)
                      .++|.|++++.-+..++..+|..  ++.    + .-......+.+-|...+-++++|++|=|.-.  +...+.  --.|.
T Consensus        64 ~v~vvSNn~e~RV~~~~~~l~v~--fi~----~-A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIl  136 (175)
T COG2179          64 KVVVVSNNKESRVARAAEKLGVP--FIY----R-AKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTIL  136 (175)
T ss_pred             EEEEEeCCCHHHHHhhhhhcCCc--eee----c-ccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEE
Confidence            99999999999999999999976  221    1 1111223567888889999999999999874  222222  23566


Q ss_pred             eceecC
Q psy17244        173 IKSWFS  178 (196)
Q Consensus       173 v~~f~~  178 (196)
                      |+|-..
T Consensus       137 V~Pl~~  142 (175)
T COG2179         137 VEPLVA  142 (175)
T ss_pred             EEEecc
Confidence            666664

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=97.73  E-value=5.5e-05  Score=64.97  Aligned_cols=96  Identities=7%  Similarity=0.073  Sum_probs=66.4

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE-------ec---CCCCC--CC-Cccccc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY-------RQ---HCTPE--LG-SYTKDL  143 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~-------r~---~c~~~--~~-~~~KdL  143 (196)
                      .+.++||+.++++.|. ..+.++|.|++...+++.+.+.++.. ..+...+-       ..   .+...  +. .+..-+
T Consensus       179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld-~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la  257 (322)
T PRK11133        179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD-AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA  257 (322)
T ss_pred             hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC-eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence            3678999999999998 67999999999999999999988765 23332221       11   11111  11 223344


Q ss_pred             cccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        144 SAISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       144 ~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +.+|.++++||.|-|+..-..+....|+.|.
T Consensus       258 ~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA  288 (322)
T PRK11133        258 QEYEIPLAQTVAIGDGANDLPMIKAAGLGIA  288 (322)
T ss_pred             HHcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            6678899999999999976655444455443

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=97.71  E-value=3.2e-05  Score=61.25  Aligned_cols=91  Identities=11%  Similarity=0.009  Sum_probs=70.4

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +..-||+.++|+.|+ +.+.++|.|++... +..+++.++.. .+|..++..+++...++   .+.+-++.+|.+++++|
T Consensus       104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~  181 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL  181 (203)
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence            367899999999998 57999999998875 47788887765 58888888777665443   56778888999999999


Q ss_pred             EEECCC-ccccCCCCceE
Q psy17244        155 ILDNSP-GAYRGFPDNAI  171 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I  171 (196)
                      +|+|++ .-.......|+
T Consensus       182 ~IgD~~~~Di~~A~~aG~  199 (203)
T TIGR02252       182 HIGDSLRNDYQGARAAGW  199 (203)
T ss_pred             EECCCchHHHHHHHHcCC
Confidence            999997 33443334444

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=97.71  E-value=4.2e-05  Score=64.51  Aligned_cols=98  Identities=13%  Similarity=0.034  Sum_probs=74.4

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC--CceeeEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR--RHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~--~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~  152 (196)
                      +.+.||+.++|+.|. +.+.++|-|++...++..+++.+...  ...|..+ ..+.+...++   .+.+-++.+|.++++
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~  221 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR  221 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence            578999999999998 68999999999999999999876321  1233333 5555544332   567788889999999


Q ss_pred             EEEEECCCccccCCCCceEeeceec
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +|+|+|++.-+.....+|+.+....
T Consensus       222 ~l~IGDs~~Di~aA~~aG~~~i~v~  246 (286)
T PLN02779        222 CVVVEDSVIGLQAAKAAGMRCIVTK  246 (286)
T ss_pred             EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence            9999999987776667776665554

>PRK08238 hypothetical protein; Validated

Probab=97.69  E-value=0.0001  Score=66.48  Aligned_cols=90  Identities=21%  Similarity=0.095  Sum_probs=59.6

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC--CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG--SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~--~~~KdL~~l~~~~~~~ii  155 (196)
                      ...+|++.++++++. ++..++|-|++.+.+++++++.++.    |+.++..+.....++  .-..-.+.++  .++++.
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y  144 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY  144 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence            457899999999997 7899999999999999999999864    666776554332222  1111112223  355778


Q ss_pred             EECCCcccc--CCCCceEeec
Q psy17244        156 LDNSPGAYR--GFPDNAIPIK  174 (196)
Q Consensus       156 IDD~~~~~~--~~~~N~I~v~  174 (196)
                      +-|+..-..  ..-+|.+.|.
T Consensus       145 vGDS~~Dlp~~~~A~~av~Vn  165 (479)
T PRK08238        145 AGNSAADLPVWAAARRAIVVG  165 (479)
T ss_pred             ecCCHHHHHHHHhCCCeEEEC
Confidence            888875332  2234555544

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=97.66  E-value=0.00011  Score=58.17  Aligned_cols=81  Identities=9%  Similarity=0.051  Sum_probs=67.3

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ...|+..++|+.|. +.+.++|.|++...+++.+++.++.. .+|+.+++.+.... ++   .+.+-++.+|.+++++|+
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~  183 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAM  183 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEE
Confidence            34556699999998 57999999999999999999999887 68988888776544 32   567778888999999999


Q ss_pred             EECCCcc
Q psy17244        156 LDNSPGA  162 (196)
Q Consensus       156 IDD~~~~  162 (196)
                      |+|++.-
T Consensus       184 vGD~~~D  190 (197)
T TIGR01548       184 VGDTVDD  190 (197)
T ss_pred             EeCCHHH
Confidence            9999753

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=97.65  E-value=2.8e-05  Score=60.39  Aligned_cols=93  Identities=10%  Similarity=0.068  Sum_probs=72.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i  154 (196)
                      ....||+.++|+.|. +.+.++|-|++.  .+..+++.++.. .+|+.++..++-...+   ..+.+-+++++.+++++|
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v  162 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLI-DYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI  162 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcH-hhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            367899999999997 679999999864  467788888876 5788887765443332   256788888999999999


Q ss_pred             EEECCCccccCCCCceEeec
Q psy17244        155 ILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~  174 (196)
                      +|+|++.-+.....+|+.+.
T Consensus       163 ~vgD~~~di~aA~~aG~~~i  182 (185)
T TIGR01990       163 GIEDAQAGIEAIKAAGMFAV  182 (185)
T ss_pred             EEecCHHHHHHHHHcCCEEE
Confidence            99999977766666676543

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PLN02811 hydrolase

Probab=97.61  E-value=6.1e-05  Score=60.71  Aligned_cols=98  Identities=5%  Similarity=0.041  Sum_probs=73.4

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH-HHHhcCCCceeeEEEEec--CCCCCC---CCccccccccC---C
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV-ADKLDARRHILRRRYYRQ--HCTPEL---GSYTKDLSAIS---P  148 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v-l~~ldp~~~~f~~~l~r~--~c~~~~---~~~~KdL~~l~---~  148 (196)
                      +.+.||+.++|+.|+ ..+.++|-|++.+.++... .+..... .+|..+++.+  ++...+   ..|.+-+++++   .
T Consensus        77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~  155 (220)
T PLN02811         77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV  155 (220)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence            567899999999998 5899999999988766543 3322333 4788888887  554433   36677777775   8


Q ss_pred             CCCcEEEEECCCccccCCCCceEeeceec
Q psy17244        149 DLSSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       149 ~~~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +++++|+|+|+..-......+|+.+....
T Consensus       156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v~  184 (220)
T PLN02811        156 DPGKVLVFEDAPSGVEAAKNAGMSVVMVP  184 (220)
T ss_pred             CccceEEEeccHhhHHHHHHCCCeEEEEe
Confidence            89999999999987777777777766654

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.59  E-value=0.00026  Score=52.75  Aligned_cols=73  Identities=19%  Similarity=0.112  Sum_probs=51.3

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH-
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA-  110 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~-  110 (196)
                      +.+++|+||||+......             +.            .....+.+.+.|+++. +.++++++|+-+..... 
T Consensus         2 K~i~~DiDGTL~~~~~~~-------------y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~   56 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGD-------------YA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEG   56 (126)
T ss_pred             CEEEEeCCCCcccCCCCc-------------cc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhc
Confidence            589999999997542100             00            1346788899999984 79999999999888766 


Q ss_pred             -----------HHHHHhcCCCceeeEEEEec
Q psy17244        111 -----------AVADKLDARRHILRRRYYRQ  130 (196)
Q Consensus       111 -----------~vl~~ldp~~~~f~~~l~r~  130 (196)
                                 .+.+.|+.++-.+..++.+.
T Consensus        57 n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k   87 (126)
T TIGR01689        57 NVGKINIHTLPIIILWLNQHNVPYDEIYVGK   87 (126)
T ss_pred             cccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence                       66777766654455555543

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=97.56  E-value=9.8e-05  Score=72.48  Aligned_cols=98  Identities=5%  Similarity=-0.049  Sum_probs=83.1

Q ss_pred             eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEEE
Q psy17244         81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~iiI  156 (196)
                      .-||+.++|++|. +.+.++|.|++...+++.+++.++....+|+.+++.+++...++   .|..-+++++.+++++|+|
T Consensus       162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I  241 (1057)
T PLN02919        162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI  241 (1057)
T ss_pred             cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence            5799999999997 68999999999999999999998864357898888887765443   6788889999999999999


Q ss_pred             ECCCccccCCCCceEeeceecC
Q psy17244        157 DNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       157 DD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +|++.-+......|+.+..+..
T Consensus       242 gDs~~Di~AA~~aGm~~I~v~~  263 (1057)
T PLN02919        242 EDALAGVQAARAAGMRCIAVTT  263 (1057)
T ss_pred             cCCHHHHHHHHHcCCEEEEECC
Confidence            9999877777777777666654

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.53  E-value=0.00014  Score=59.69  Aligned_cols=96  Identities=14%  Similarity=0.071  Sum_probs=66.8

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +-..++||+||||++..                                ..-||+.++|++|. +.+.++|.|+++++.+
T Consensus         7 ~~~~~~~D~dG~l~~~~--------------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~   54 (242)
T TIGR01459         7 DYDVFLLDLWGVIIDGN--------------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIF   54 (242)
T ss_pred             cCCEEEEecccccccCC--------------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChH
Confidence            34578999999998653                                23699999999998 6899999999998877


Q ss_pred             H--HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCC
Q psy17244        110 A--AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSP  160 (196)
Q Consensus       110 ~--~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~  160 (196)
                      .  ..++.++.....|..+++.......  ....-++.++.+++++++|-|+.
T Consensus        55 ~~~~~L~~~gl~~~~~~~Ii~s~~~~~~--~l~~~~~~~~~~~~~~~~vGd~~  105 (242)
T TIGR01459        55 SLHKTLKSLGINADLPEMIISSGEIAVQ--MILESKKRFDIRNGIIYLLGHLE  105 (242)
T ss_pred             HHHHHHHHCCCCccccceEEccHHHHHH--HHHhhhhhccCCCceEEEeCCcc
Confidence            6  6778887762267777765533211  11122234455566777777755

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=97.49  E-value=0.00029  Score=55.53  Aligned_cols=113  Identities=11%  Similarity=0.107  Sum_probs=71.3

Q ss_pred             CCCeEEEEeCCCceeeeec-CCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         30 VKRKVLVLDLDETLIHSHH-DGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      .+.+.+++|+||||+.... ...       .   +..         ...+.. |.+  .=++.+. +.++++|-|+....
T Consensus        19 ~~ikli~~D~Dgtl~~~~i~~~~-------~---~~~---------~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~   76 (183)
T PRK09484         19 ENIRLLICDVDGVFSDGLIYMGN-------N---GEE---------LKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSK   76 (183)
T ss_pred             hCceEEEEcCCeeeecCEEEEcC-------C---CCE---------EEEEec-cch--HHHHHHHHCCCEEEEEeCCCcH
Confidence            3678999999999997631 100       0   000         111111 322  2344444 68999999999999


Q ss_pred             hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244        108 YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       108 ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      .+..+++.++.. .+|.      .+......+.+-++.+|.++++++.|-|+..-.......|+
T Consensus        77 ~v~~~l~~lgl~-~~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~  133 (183)
T PRK09484         77 LVEDRMTTLGIT-HLYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGL  133 (183)
T ss_pred             HHHHHHHHcCCc-eeec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCC
Confidence            999999999865 3543      11111224456677789999999999999865443333333

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=97.49  E-value=0.00028  Score=53.28  Aligned_cols=81  Identities=5%  Similarity=-0.091  Sum_probs=65.2

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      .....||+.++|+.|. +.+.++|.|++.+..+..+++.+ .. .+|..++..+++. .++   .+.+-++++|.++ ++
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~  137 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV  137 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence            3455699999999996 68999999999999999999985 33 4677777777665 332   5677788888888 99


Q ss_pred             EEEECCCcc
Q psy17244        154 FILDNSPGA  162 (196)
Q Consensus       154 iiIDD~~~~  162 (196)
                      ++|.|++.-
T Consensus       138 l~iGDs~~D  146 (154)
T TIGR01549       138 LHVGDNLND  146 (154)
T ss_pred             EEEeCCHHH
Confidence            999999753

HAD subfamilies caused by an overly broad single model.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=97.43  E-value=0.00019  Score=56.33  Aligned_cols=94  Identities=12%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC-------------Ccccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG-------------SYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~-------------~~~KdL~  144 (196)
                      +..+||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|...+..+......+             .+.+-++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~  157 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD-YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR  157 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC-eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence            568999999999997 68999999999999999999999876 46665544322111110             1122245


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .++.+++++++|.|+..-.......|+.+
T Consensus       158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~  186 (201)
T TIGR01491       158 ELNPSLTETVAVGDSKNDLPMFEVADISI  186 (201)
T ss_pred             HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence            56888999999999986555444445533

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PTZ00445 p36-lilke protein; Provisional

Probab=97.38  E-value=0.00015  Score=58.41  Aligned_cols=136  Identities=17%  Similarity=0.221  Sum_probs=85.4

Q ss_pred             cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc
Q psy17244         27 LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM  105 (196)
Q Consensus        27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~  105 (196)
                      +...+-+.+++|||.|||..-....    ..+..            +...+.-..+|.+.+++..|. ..+.|+|-|-+.
T Consensus        38 L~~~GIk~Va~D~DnTlI~~HsgG~----~~~~~------------~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd  101 (219)
T PTZ00445         38 LNECGIKVIASDFDLTMITKHSGGY----IDPDN------------DDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSD  101 (219)
T ss_pred             HHHcCCeEEEecchhhhhhhhcccc----cCCCc------------chhhhhccCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence            4456889999999999986321110    11110            011234567999999999998 589999999888


Q ss_pred             hhh---------------HHHHHHHhcCCCceeeEEE-E-----ecC-----CCCC---CCC--c--cccccccCCCCCc
Q psy17244        106 EIY---------------GAAVADKLDARRHILRRRY-Y-----RQH-----CTPE---LGS--Y--TKDLSAISPDLSS  152 (196)
Q Consensus       106 ~~y---------------a~~vl~~ldp~~~~f~~~l-~-----r~~-----c~~~---~~~--~--~KdL~~l~~~~~~  152 (196)
                      +.-               ++..++.-.-+-. +..++ |     .+.     +...   .+.  |  .+-+++.|.++++
T Consensus       102 ~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE  180 (219)
T PTZ00445        102 KELIPSENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDE  180 (219)
T ss_pred             hhhccccCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHH
Confidence            743               4444443222211 11221 1     111     1111   112  3  4556677999999


Q ss_pred             EEEEECCCccccCCCCceEeeceecCC
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSWFSD  179 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f~~~  179 (196)
                      +++|||++..+.....-|+...-|.+.
T Consensus       181 ~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        181 ILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             eEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence            999999999988777788887777653

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.37  E-value=0.00023  Score=57.12  Aligned_cols=81  Identities=7%  Similarity=0.128  Sum_probs=56.0

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCC--------CC--CCCccccccccCC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCT--------PE--LGSYTKDLSAISP  148 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~--------~~--~~~~~KdL~~l~~  148 (196)
                      +.++||+.+|++++.+...++|-|++...+++++++.++.. .+|...+--+...        ..  +....+-++..+ 
T Consensus        67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~-~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~-  144 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFP-TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY-  144 (203)
T ss_pred             CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCc-hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence            57899999999999977899999999999999999999876 4666544332210        00  111222232222 


Q ss_pred             CCCcEEEEECCCccc
Q psy17244        149 DLSSIFILDNSPGAY  163 (196)
Q Consensus       149 ~~~~~iiIDD~~~~~  163 (196)
                        .+++.|-|+..-.
T Consensus       145 --~~~v~vGDs~nDl  157 (203)
T TIGR02137       145 --YRVIAAGDSYNDT  157 (203)
T ss_pred             --CCEEEEeCCHHHH
Confidence              3788998888643

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=97.36  E-value=4.8e-05  Score=58.78  Aligned_cols=77  Identities=6%  Similarity=0.043  Sum_probs=65.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.      ++|.|+++..++..+++.++.. .+|+.+++.+.....++   .|.+-++++|.+++++++
T Consensus        89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~  161 (175)
T TIGR01493        89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM  161 (175)
T ss_pred             CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence            5689999999993      7899999999999999999876 68888888876555443   678888999999999999


Q ss_pred             EECCCcc
Q psy17244        156 LDNSPGA  162 (196)
Q Consensus       156 IDD~~~~  162 (196)
                      |+|++.-
T Consensus       162 vgD~~~D  168 (175)
T TIGR01493       162 VAAHQWD  168 (175)
T ss_pred             EecChhh
Confidence            9999743

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.28  E-value=0.00084  Score=56.18  Aligned_cols=96  Identities=17%  Similarity=0.072  Sum_probs=56.2

Q ss_pred             CCCeEEEEeCCCceeeeecCCCC-CCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGIT-RPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      .+++.+|||+|||+++.+..... .....+.+..++.--      ...--...-||+.+||+.+. +...+++.|+....
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~w------v~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~  146 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKW------VQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEK  146 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHH------HHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            46789999999999987632100 000001100001000      00012456799999999996 78999999998876


Q ss_pred             hHHHHHH---HhcCCCceeeEEEEecC
Q psy17244        108 YGAAVAD---KLDARRHILRRRYYRQH  131 (196)
Q Consensus       108 ya~~vl~---~ldp~~~~f~~~l~r~~  131 (196)
                      ..+...+   .++.....+++++.++.
T Consensus       147 ~~~~T~~~Lkk~Gi~~~~~d~lllr~~  173 (266)
T TIGR01533       147 EKAATLKNLKRFGFPQADEEHLLLKKD  173 (266)
T ss_pred             hHHHHHHHHHHcCcCCCCcceEEeCCC
Confidence            6664444   44443223457777753

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=97.26  E-value=0.00023  Score=63.82  Aligned_cols=93  Identities=10%  Similarity=0.114  Sum_probs=72.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC--CCCCccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP--ELGSYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~--~~~~~~KdL~~l~~~~~~~ii  155 (196)
                      +.+.||+.++|++|. +.+.++|.|++...++..+++.++-. .+|..+++.+....  ....+.+-++.+  +++++++
T Consensus       329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~  405 (459)
T PRK06698        329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV  405 (459)
T ss_pred             CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence            567899999999997 68999999999999999999999886 58988888776532  222445555555  4689999


Q ss_pred             EECCCccccCCCCceEeec
Q psy17244        156 LDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~  174 (196)
                      |.|++.-.......|+.+.
T Consensus       406 VGDs~~Di~aAk~AG~~~I  424 (459)
T PRK06698        406 VGDRLSDINAAKDNGLIAI  424 (459)
T ss_pred             EeCCHHHHHHHHHCCCeEE
Confidence            9999987666666666543

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.23  E-value=0.00025  Score=63.16  Aligned_cols=134  Identities=19%  Similarity=0.153  Sum_probs=80.9

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      ...+++||||||+||+--..-..          .--.++..-...+..+     =-+++|+..+. +++=++|.|.....
T Consensus       219 g~~kK~LVLDLDNTLWGGVIGed----------Gv~GI~Ls~~~~G~~f-----k~fQ~~Ik~l~kqGVlLav~SKN~~~  283 (574)
T COG3882         219 GKSKKALVLDLDNTLWGGVIGED----------GVDGIRLSNSAEGEAF-----KTFQNFIKGLKKQGVLLAVCSKNTEK  283 (574)
T ss_pred             CcccceEEEecCCcccccccccc----------cccceeecCCCCchhH-----HHHHHHHHHHHhccEEEEEecCCchh
Confidence            45889999999999987653110          0011111100000000     12567777776 78999999999999


Q ss_pred             hHHHHHHHhcCCCceeeEE-EEecCCCCCC--CCccccccccCCCCCcEEEEECCCccccCCCCce-EeeceecCC
Q psy17244        108 YGAAVADKLDARRHILRRR-YYRQHCTPEL--GSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNA-IPIKSWFSD  179 (196)
Q Consensus       108 ya~~vl~~ldp~~~~f~~~-l~r~~c~~~~--~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~-I~v~~f~~~  179 (196)
                      -|+.+..+- |+ .+++-- +..-.|....  ....|..++|+-..+..++|||+|.-...-..++ +.|.+|-.+
T Consensus       284 da~evF~kh-p~-MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D  357 (574)
T COG3882         284 DAKEVFRKH-PD-MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED  357 (574)
T ss_pred             hHHHHHhhC-CC-eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence            998887653 32 222111 1122333332  2557888999999999999999997654333222 666666544

>KOG2914|consensus

Probab=97.23  E-value=0.00043  Score=56.41  Aligned_cols=100  Identities=8%  Similarity=0.028  Sum_probs=73.8

Q ss_pred             EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE--ecCCCCC---CCCccccccccCCC
Q psy17244         76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY--RQHCTPE---LGSYTKDLSAISPD  149 (196)
Q Consensus        76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~--r~~c~~~---~~~~~KdL~~l~~~  149 (196)
                      .-.++.-||+..++..|. ..-.+.+||++.+..++..++.+.-.-..|++...  -+.+...   ...|.+-++++|.+
T Consensus        88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~  167 (222)
T KOG2914|consen   88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVP  167 (222)
T ss_pred             ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCC
Confidence            345788899999999998 68999999999999888888877632245666554  2233222   23688999999998


Q ss_pred             C-CcEEEEECCCccccCCC---CceEeece
Q psy17244        150 L-SSIFILDNSPGAYRGFP---DNAIPIKS  175 (196)
Q Consensus       150 ~-~~~iiIDD~~~~~~~~~---~N~I~v~~  175 (196)
                      + +.+++++|++.-.....   -+.|.++.
T Consensus       168 ~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  168 PPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             CccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence            8 99999999998665444   34444444

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.20  E-value=0.00081  Score=51.96  Aligned_cols=107  Identities=23%  Similarity=0.343  Sum_probs=59.7

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc---h--
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM---E--  106 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~---~--  106 (196)
                      |.+.||+||||+.......     -+....|+              ...-|++.+-|+++. +.|.|+|.|+-.   .  
T Consensus         1 Kia~fD~DgTLi~~~s~~~-----f~~~~~D~--------------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~   61 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKK-----FPKDPDDW--------------KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGM   61 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTT-----S-SSTCGG--------------EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTB
T ss_pred             CEEEEeCCCCccCCCCCCc-----CcCCHHHh--------------hhcchhHHHHHHHHHhcCCeEEEEeCcccccccc
Confidence            4688999999999875321     11223333              556789999999998 699999999862   1  


Q ss_pred             ---------hhHHHHHHHhcCCCceeeEEEEe---cCCCCC-CCCccccccccC----CCCCcEEEEECCCcc
Q psy17244        107 ---------IYGAAVADKLDARRHILRRRYYR---QHCTPE-LGSYTKDLSAIS----PDLSSIFILDNSPGA  162 (196)
Q Consensus       107 ---------~ya~~vl~~ldp~~~~f~~~l~r---~~c~~~-~~~~~KdL~~l~----~~~~~~iiIDD~~~~  162 (196)
                               ...+.+++.++..   + .++..   +.|... .|++..-++.++    .+.++.++|=|+..-
T Consensus        62 ~~~~~~~~~~ki~~il~~l~ip---~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   62 GEKDLENFHEKIENILKELGIP---I-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             TCCHHHHHHHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             ccchHHHHHHHHHHHHHHcCCc---e-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence                     2334455555432   2 22221   223322 234433344443    488899999987654

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.07  E-value=0.0014  Score=46.75  Aligned_cols=50  Identities=24%  Similarity=0.244  Sum_probs=38.1

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      ++||+||||++..                                ..=||+.+|++.|. +...+++.|+++..-...++
T Consensus         1 ~l~D~dGvl~~g~--------------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~   48 (101)
T PF13344_consen    1 FLFDLDGVLYNGN--------------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYA   48 (101)
T ss_dssp             EEEESTTTSEETT--------------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHH
T ss_pred             CEEeCccEeEeCC--------------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH
Confidence            5799999999743                                23599999999998 57999999999866656665


Q ss_pred             HHh
Q psy17244        114 DKL  116 (196)
Q Consensus       114 ~~l  116 (196)
                      +.|
T Consensus        49 ~~L   51 (101)
T PF13344_consen   49 KKL   51 (101)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            555

...

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.07  E-value=0.0014  Score=52.94  Aligned_cols=84  Identities=10%  Similarity=0.165  Sum_probs=62.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecC-----------CCCCC-CCc-ccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH-----------CTPEL-GSY-TKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~-----------c~~~~-~~~-~KdL~  144 (196)
                      ..++||+.+.++.+. ..+.++|.|+|...+++++.+.++.+ ..++..+-.+.           |.... ..- ..-++
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d-~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~  154 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID-YVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA  154 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc-hheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence            889999999999998 67999999999999999999999987 45666665554           21110 011 12234


Q ss_pred             ccCCCCCcEEEEECCCccc
Q psy17244        145 AISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~  163 (196)
                      .+|.++++++.+=|+..-.
T Consensus       155 ~~g~~~~~~~a~gDs~nDl  173 (212)
T COG0560         155 ELGIPLEETVAYGDSANDL  173 (212)
T ss_pred             HcCCCHHHeEEEcCchhhH
Confidence            4578889999999988644

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=97.04  E-value=0.0021  Score=50.15  Aligned_cols=105  Identities=18%  Similarity=0.240  Sum_probs=68.9

Q ss_pred             CCcccccc--cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCc
Q psy17244         19 LSPLSRHR--LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWY   96 (196)
Q Consensus        19 ~~p~~~~~--~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~y   96 (196)
                      +.-++-..  +...+-+.||||+|+||+.-..                              -..-|.+.+.+++|.+.|
T Consensus        26 i~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~------------------------------~~i~~~~~~~~~~l~~~~   75 (168)
T PF09419_consen   26 IRDIDFEANHLKKKGIKALIFDKDNTLTPPYE------------------------------DEIPPEYAEWLNELKKQF   75 (168)
T ss_pred             hhhCCcchhhhhhcCceEEEEcCCCCCCCCCc------------------------------CcCCHHHHHHHHHHHHHC
Confidence            33344444  6677999999999999975432                              234678889999998654


Q ss_pred             -e--EEEEcCCc-------hhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccC-----CCCCcEEEEECCCc
Q psy17244         97 -E--LVVFTASM-------EIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAIS-----PDLSSIFILDNSPG  161 (196)
Q Consensus        97 -e--i~I~T~~~-------~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~-----~~~~~~iiIDD~~~  161 (196)
                       .  |+|.|++.       ..-|+.+-+.++..  .+.+.     +.. .+.+.+-++.++     ..++++++|-|...
T Consensus        76 ~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~h~-----~kK-P~~~~~i~~~~~~~~~~~~p~eiavIGDrl~  147 (168)
T PF09419_consen   76 GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLRHR-----AKK-PGCFREILKYFKCQKVVTSPSEIAVIGDRLF  147 (168)
T ss_pred             CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEEeC-----CCC-CccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence             3  99999984       66677788888743  33222     221 122223333332     35899999999863

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.92  E-value=0.0016  Score=50.83  Aligned_cols=106  Identities=8%  Similarity=0.020  Sum_probs=70.7

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      .-+.+|||.||+|-+-...-.                  ..+ .....+..|-|.--.+-. .+.+.++|.|+....+++
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~------------------~~g-~~~~~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~   65 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVIN------------------DEG-IESRNFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVR   65 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEc------------------CCC-cEEEEEecchHHHHHHHH-HCCCEEEEEECCCcHHHH
Confidence            467899999999987642100                  000 112234555555432221 368999999999999999


Q ss_pred             HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccc
Q psy17244        111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                      .+++.++.. .+|...      ......+..-+++++.++++++.|-|+..-.
T Consensus        66 ~~l~~lgi~-~~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi  111 (169)
T TIGR02726        66 HRAEELKIK-RFHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL  111 (169)
T ss_pred             HHHHHCCCc-EEEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence            999999886 466431      1122245566677788999999999998643

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.91  E-value=0.0024  Score=53.18  Aligned_cols=58  Identities=16%  Similarity=0.147  Sum_probs=47.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.+++||||||+.+..                               ...|...+.|+.+. +...++|-|..+...+
T Consensus         3 ~~kli~~DlDGTLl~~~~-------------------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~   51 (273)
T PRK00192          3 MKLLVFTDLDGTLLDHHT-------------------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV   51 (273)
T ss_pred             cceEEEEcCcccCcCCCC-------------------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            357899999999997531                               12467889999998 5799999999999999


Q ss_pred             HHHHHHhcCC
Q psy17244        110 AAVADKLDAR  119 (196)
Q Consensus       110 ~~vl~~ldp~  119 (196)
                      ..+++.++..
T Consensus        52 ~~~~~~l~l~   61 (273)
T PRK00192         52 EVLRKELGLE   61 (273)
T ss_pred             HHHHHHcCCC
Confidence            9999998754

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=96.86  E-value=0.00082  Score=54.93  Aligned_cols=90  Identities=8%  Similarity=0.013  Sum_probs=66.3

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +..-||+.++|+.|++.+.++|-|++...     ++..+.. .+|+.++..+.....++   .|.+-++++|.+++++++
T Consensus       112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~  185 (238)
T PRK10748        112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH  185 (238)
T ss_pred             CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence            45669999999999988999999998765     2455554 68888887765544333   567778889999999999


Q ss_pred             EECCC-ccccCCCCceEeec
Q psy17244        156 LDNSP-GAYRGFPDNAIPIK  174 (196)
Q Consensus       156 IDD~~-~~~~~~~~N~I~v~  174 (196)
                      |-|++ .-......+|+...
T Consensus       186 VGD~~~~Di~~A~~aG~~~i  205 (238)
T PRK10748        186 VGDDLTTDVAGAIRCGMQAC  205 (238)
T ss_pred             EcCCcHHHHHHHHHCCCeEE
Confidence            99985 54444445555443

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.81  E-value=0.0035  Score=51.70  Aligned_cols=59  Identities=22%  Similarity=0.198  Sum_probs=51.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.+++||||||+.+..                               ...|...+.|+.+. +...++|.|..+...+
T Consensus         2 ~~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~   50 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNK-------------------------------TISPETKEALARLREKGVKVVLATGRPLPDV   50 (264)
T ss_pred             CeeEEEEcCCCCccCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH
Confidence            357899999999998863                               15788899999885 8999999999999999


Q ss_pred             HHHHHHhcCCC
Q psy17244        110 AAVADKLDARR  120 (196)
Q Consensus       110 ~~vl~~ldp~~  120 (196)
                      .++++.|+...
T Consensus        51 ~~~~~~l~~~~   61 (264)
T COG0561          51 LSILEELGLDG   61 (264)
T ss_pred             HHHHHHcCCCc
Confidence            99999998763

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=96.66  E-value=0.0046  Score=49.45  Aligned_cols=56  Identities=14%  Similarity=0.133  Sum_probs=46.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+...                               -..-|...+-|+++. +...++|-|..+...+..
T Consensus         2 k~v~~DlDGTLl~~~-------------------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~   50 (215)
T TIGR01487         2 KLVAIDIDGTLTEPN-------------------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARA   50 (215)
T ss_pred             cEEEEecCCCcCCCC-------------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHH
Confidence            478999999999642                               124567788889987 679999999999999999


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        51 ~~~~l~~~   58 (215)
T TIGR01487        51 LAVLIGTS   58 (215)
T ss_pred             HHHHhCCC
Confidence            99998775

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=96.53  E-value=0.0031  Score=50.47  Aligned_cols=54  Identities=22%  Similarity=0.164  Sum_probs=45.1

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      |++||||||+++..                               ..-|...+.|+++. ++..+++.|.-+...+..++
T Consensus         1 i~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~   49 (254)
T PF08282_consen    1 IFSDLDGTLLNSDG-------------------------------KISPETIEALKELQEKGIKLVIATGRSYSSIKRLL   49 (254)
T ss_dssp             EEEECCTTTCSTTS-------------------------------SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHH
T ss_pred             cEEEECCceecCCC-------------------------------eeCHHHHHHHHhhcccceEEEEEccCccccccccc
Confidence            68999999998542                               13477888999887 89999999999999999999


Q ss_pred             HHhcCC
Q psy17244        114 DKLDAR  119 (196)
Q Consensus       114 ~~ldp~  119 (196)
                      ..+.-.
T Consensus        50 ~~~~~~   55 (254)
T PF08282_consen   50 KELGID   55 (254)
T ss_dssp             HHTTHC
T ss_pred             ccccch
Confidence            987654

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=96.50  E-value=0.0091  Score=50.26  Aligned_cols=104  Identities=17%  Similarity=0.231  Sum_probs=67.9

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcC---CCceeeEEEEecCCCCC---CC----Cccc-----
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDA---RRHILRRRYYRQHCTPE---LG----SYTK-----  141 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp---~~~~f~~~l~r~~c~~~---~~----~~~K-----  141 (196)
                      .+.+|||+.+|++.|. ....++|+|+|...+++.+++.++.   ...+++.++--+..+..   .+    .+.|     
T Consensus       119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~  198 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA  198 (277)
T ss_pred             CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence            5889999999999997 6799999999999999999998654   22454555433211111   11    1122     


Q ss_pred             --cccccC--CCCCcEEEEECCCcccc-----CCCCceEeeceecCCCCC
Q psy17244        142 --DLSAIS--PDLSSIFILDNSPGAYR-----GFPDNAIPIKSWFSDPSD  182 (196)
Q Consensus       142 --dL~~l~--~~~~~~iiIDD~~~~~~-----~~~~N~I~v~~f~~~~~D  182 (196)
                        ..+.++  .++++||+|-|+..-..     .+.+|.|.| .|-.+.-+
T Consensus       199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e  247 (277)
T TIGR01544       199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVD  247 (277)
T ss_pred             HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHH
Confidence              222345  68899999999997442     233566655 44443333

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=96.50  E-value=0.0082  Score=48.25  Aligned_cols=57  Identities=12%  Similarity=0.138  Sum_probs=44.9

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++||||||+.+..                               ...|...+-|.++. +...++|-|.-+...+.
T Consensus         3 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~   51 (230)
T PRK01158          3 IKAIAIDIDGTITDKDR-------------------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFAR   51 (230)
T ss_pred             eeEEEEecCCCcCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHH
Confidence            36899999999996531                               23566777888887 57899999999988888


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      ++++.++..
T Consensus        52 ~~~~~l~~~   60 (230)
T PRK01158         52 AAAKLIGTS   60 (230)
T ss_pred             HHHHHhCCC
Confidence            888888765

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.45  E-value=0.0067  Score=50.45  Aligned_cols=59  Identities=15%  Similarity=0.170  Sum_probs=45.8

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      ..++.+++||||||+++...                               .-|-..+-|+++. ++..++|.|.-+...
T Consensus         5 ~~~~lI~~DlDGTLL~~~~~-------------------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~   53 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDSHTY-------------------------------DWQPAAPWLTRLREAQVPVILCSSKTAAE   53 (271)
T ss_pred             CCCeEEEEeCccCCcCCCCc-------------------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHH
Confidence            46778999999999975310                               1234567788887 679999999999999


Q ss_pred             HHHHHHHhcCC
Q psy17244        109 GAAVADKLDAR  119 (196)
Q Consensus       109 a~~vl~~ldp~  119 (196)
                      +..+++.++..
T Consensus        54 i~~~~~~l~~~   64 (271)
T PRK03669         54 MLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHhCCC
Confidence            99999998753

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=96.38  E-value=0.0073  Score=49.56  Aligned_cols=55  Identities=20%  Similarity=0.230  Sum_probs=42.7

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v  112 (196)
                      .+++||||||++...                               ...|...+.|+++. ++..++|-|..+...+..+
T Consensus         1 li~~DlDGTLl~~~~-------------------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~   49 (256)
T TIGR00099         1 LIFIDLDGTLLNDDH-------------------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNI   49 (256)
T ss_pred             CEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence            378999999997531                               13456677888887 5789999999998888888


Q ss_pred             HHHhcCC
Q psy17244        113 ADKLDAR  119 (196)
Q Consensus       113 l~~ldp~  119 (196)
                      ++.++..
T Consensus        50 ~~~~~~~   56 (256)
T TIGR00099        50 LKELGLD   56 (256)
T ss_pred             HHHcCCC
Confidence            8887654

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=96.38  E-value=0.0054  Score=49.19  Aligned_cols=87  Identities=8%  Similarity=0.085  Sum_probs=58.4

Q ss_pred             EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEE--EecCCCCCCC---C----------ccc
Q psy17244         78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRY--YRQHCTPELG---S----------YTK  141 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l--~r~~c~~~~~---~----------~~K  141 (196)
                      .+.+|||+.+||+.+.+ ...++|.|++...+++.+++.+.....++....  ..+.....+.   .          -.+
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~  147 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS  147 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence            47899999999999984 799999999999999999999854433443221  1111000000   0          012


Q ss_pred             cccccCCCCCcEEEEECCCcccc
Q psy17244        142 DLSAISPDLSSIFILDNSPGAYR  164 (196)
Q Consensus       142 dL~~l~~~~~~~iiIDD~~~~~~  164 (196)
                      -++.++...++++.|-|+..-..
T Consensus       148 ~l~~~~~~~~~~i~iGDg~~D~~  170 (214)
T TIGR03333       148 LIRKLSEPNDYHIVIGDSVTDVE  170 (214)
T ss_pred             HHHHHhhcCCcEEEEeCCHHHHH
Confidence            34444556788999999987554

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=96.38  E-value=0.011  Score=48.71  Aligned_cols=57  Identities=21%  Similarity=0.232  Sum_probs=35.7

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++||||||+.+...                               .-|...+-|+++. ++..++|-|.-....+.
T Consensus         3 ~kli~~DlDGTLl~~~~~-------------------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~   51 (272)
T PRK10530          3 YRVIALDLDGTLLTPKKT-------------------------------ILPESLEALARAREAGYKVIIVTGRHHVAIH   51 (272)
T ss_pred             ccEEEEeCCCceECCCCc-------------------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHH
Confidence            468999999999976421                               1233445555555 45666666666666666


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.++..
T Consensus        52 ~~~~~l~~~   60 (272)
T PRK10530         52 PFYQALALD   60 (272)
T ss_pred             HHHHhcCCC
Confidence            666666543

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=96.38  E-value=0.012  Score=48.46  Aligned_cols=52  Identities=8%  Similarity=0.252  Sum_probs=43.6

Q ss_pred             EEeeCccHHHHHHHhh---hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec
Q psy17244         78 FVHKRPHVDFFLDIVS---QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ  130 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~---~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~  130 (196)
                      .+..-||..+|++.++   ..++++|-|.|..-|.+.|++.-+.. ..|+.+++..
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~-~~f~~I~TNp  123 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR-DCFSEIFTNP  123 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc-cccceEEeCC
Confidence            4788999999999994   48999999999999999999998876 4666555443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=96.37  E-value=0.0075  Score=49.77  Aligned_cols=57  Identities=19%  Similarity=0.192  Sum_probs=44.9

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++||||||+++..                               ..-|...+-|+++. ++..++|-|.-+...+.
T Consensus         3 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~   51 (270)
T PRK10513          3 IKLIAIDMDGTLLLPDH-------------------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVH   51 (270)
T ss_pred             eEEEEEecCCcCcCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHH
Confidence            46899999999997641                               12355667888887 67999999999999999


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.++..
T Consensus        52 ~~~~~l~~~   60 (270)
T PRK10513         52 RYLKELHME   60 (270)
T ss_pred             HHHHHhCCC
Confidence            999888753

>PRK10444 UMP phosphatase; Provisional

Probab=96.35  E-value=0.0088  Score=49.44  Aligned_cols=53  Identities=25%  Similarity=0.360  Sum_probs=43.9

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++|+||||++..                                ..=||+.++++.|. +...+++-|+++..-...
T Consensus         2 ~~v~~DlDGtL~~~~--------------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~   49 (248)
T PRK10444          2 KNVICDIDGVLMHDN--------------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQD   49 (248)
T ss_pred             cEEEEeCCCceEeCC--------------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence            478999999999874                                12489999999998 689999999999887777


Q ss_pred             HHHHhc
Q psy17244        112 VADKLD  117 (196)
Q Consensus       112 vl~~ld  117 (196)
                      +++.|.
T Consensus        50 ~~~~l~   55 (248)
T PRK10444         50 LANRFA   55 (248)
T ss_pred             HHHHHH
Confidence            777764

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.30  E-value=0.017  Score=45.61  Aligned_cols=111  Identities=23%  Similarity=0.243  Sum_probs=74.5

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc----
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM----  105 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~----  105 (196)
                      ..+.|+||.||||+--...              +.-  ..+      -..+.||+.+-|..+. ..|.++|+|+-+    
T Consensus         4 ~~k~lflDRDGtin~d~~~--------------yv~--~~~------~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~r   61 (181)
T COG0241           4 DQKALFLDRDGTINIDKGD--------------YVD--SLD------DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGR   61 (181)
T ss_pred             CCcEEEEcCCCceecCCCc--------------ccC--cHH------HhccCccHHHHHHHHHhCCCeEEEEECCCCccc
Confidence            3679999999999855421              000  000      1567899999999996 689999999943    


Q ss_pred             h--------hhHHHHHHHhcCCCceeeEEEEecC-----CCCCC---CCccccccccCCCCCcEEEEECCCccc
Q psy17244        106 E--------IYGAAVADKLDARRHILRRRYYRQH-----CTPEL---GSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       106 ~--------~ya~~vl~~ldp~~~~f~~~l~r~~-----c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                      .        .+-+.++..|--.+.-|+.++++.|     |...+   +++..-++..+.++++.++|=|+..-.
T Consensus        62 gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dl  135 (181)
T COG0241          62 GYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDL  135 (181)
T ss_pred             cCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHH
Confidence            1        2222344455444456788887653     44433   355666777788999999999996533

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=96.29  E-value=0.0066  Score=48.65  Aligned_cols=54  Identities=19%  Similarity=0.169  Sum_probs=43.1

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      +++||||||+++...                              . -|-..+.|+.+. +...++|.|..+...+..++
T Consensus         2 i~~DlDGTLL~~~~~------------------------------~-~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~   50 (221)
T TIGR02463         2 VFSDLDGTLLDSHSY------------------------------D-WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQ   50 (221)
T ss_pred             EEEeCCCCCcCCCCC------------------------------C-cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence            789999999976410                              1 122678899887 57999999999999999999


Q ss_pred             HHhcCC
Q psy17244        114 DKLDAR  119 (196)
Q Consensus       114 ~~ldp~  119 (196)
                      +.++..
T Consensus        51 ~~l~~~   56 (221)
T TIGR02463        51 KALGLT   56 (221)
T ss_pred             HHcCCC
Confidence            998753

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.24  E-value=0.011  Score=48.06  Aligned_cols=54  Identities=17%  Similarity=0.154  Sum_probs=43.2

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v  112 (196)
                      .+++||||||++...                              +  -|...++|+++. +...+++.|.-+..-+..+
T Consensus         1 li~~DlDGTLl~~~~------------------------------~--~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~   48 (225)
T TIGR02461         1 VIFTDLDGTLLPPGY------------------------------E--PGPAREALEELKDLGFPIVFVSSKTRAEQEYY   48 (225)
T ss_pred             CEEEeCCCCCcCCCC------------------------------C--chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence            378999999998321                              1  245789999998 5799999999999988889


Q ss_pred             HHHhcCC
Q psy17244        113 ADKLDAR  119 (196)
Q Consensus       113 l~~ldp~  119 (196)
                      ++.++..
T Consensus        49 ~~~lg~~   55 (225)
T TIGR02461        49 REELGVE   55 (225)
T ss_pred             HHHcCCC
Confidence            9888753

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PLN02645 phosphoglycolate phosphatase

Probab=96.23  E-value=0.009  Score=50.92  Aligned_cols=54  Identities=19%  Similarity=0.181  Sum_probs=42.9

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +-+.++||+||||++...                              +  =||+.++|+.|. +...+++-|+.+..-.
T Consensus        27 ~~~~~~~D~DGtl~~~~~------------------------------~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~   74 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDK------------------------------L--IEGVPETLDMLRSMGKKLVFVTNNSTKSR   74 (311)
T ss_pred             hCCEEEEeCcCCeEeCCc------------------------------c--CcCHHHHHHHHHHCCCEEEEEeCCCCCCH
Confidence            456899999999987531                              2  289999999997 7899999999986666


Q ss_pred             HHHHHHh
Q psy17244        110 AAVADKL  116 (196)
Q Consensus       110 ~~vl~~l  116 (196)
                      ..+++.|
T Consensus        75 ~~~~~~l   81 (311)
T PLN02645         75 AQYGKKF   81 (311)
T ss_pred             HHHHHHH
Confidence            6666554

>PRK10976 putative hydrolase; Provisional

Probab=96.20  E-value=0.012  Score=48.40  Aligned_cols=56  Identities=23%  Similarity=0.342  Sum_probs=38.4

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+++..                               ..-|...+-|+.+. ++..++|-|.-+...+..
T Consensus         3 kli~~DlDGTLl~~~~-------------------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~   51 (266)
T PRK10976          3 QVVASDLDGTLLSPDH-------------------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQ   51 (266)
T ss_pred             eEEEEeCCCCCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHH
Confidence            6899999999997642                               12344456666665 567777777777777777


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        52 ~~~~l~~~   59 (266)
T PRK10976         52 IRDNLEIK   59 (266)
T ss_pred             HHHhcCCC
Confidence            77776554

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.19  E-value=0.012  Score=48.76  Aligned_cols=56  Identities=18%  Similarity=0.154  Sum_probs=39.9

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+.+..                               ..-|...+-|+++. ++..+++-|.-+...+..
T Consensus         3 kli~~DlDGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~   51 (272)
T PRK15126          3 RLAAFDMDGTLLMPDH-------------------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQH   51 (272)
T ss_pred             cEEEEeCCCcCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence            6899999999997531                               12344566677776 567777777777777777


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        52 ~~~~l~~~   59 (272)
T PRK15126         52 ILGALSLD   59 (272)
T ss_pred             HHHHcCCC
Confidence            77777654

>smart00775 LNS2 LNS2 domain

Probab=96.11  E-value=0.012  Score=45.36  Aligned_cols=63  Identities=19%  Similarity=0.227  Sum_probs=42.7

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH--
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA--  110 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~--  110 (196)
                      .+++|+||||+.+.......    +.          +..    .  ...|++.++++.+. +.+.+++.|+.....+.  
T Consensus         1 iVisDIDGTL~~sd~~~~~~----~~----------~~~----~--~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t   60 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVV----PI----------IGK----D--WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRT   60 (157)
T ss_pred             CEEEecCCCCcccccccccc----cc----------ccc----C--cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHH
Confidence            37899999999875221100    00          000    1  33799999999998 68999999888877664  


Q ss_pred             -HHHHHh
Q psy17244        111 -AVADKL  116 (196)
Q Consensus       111 -~vl~~l  116 (196)
                       ..++.+
T Consensus        61 ~~~l~~~   67 (157)
T smart00775       61 RSYLSQI   67 (157)
T ss_pred             HHHHHHh
Confidence             566653

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.08  E-value=0.017  Score=48.97  Aligned_cols=57  Identities=12%  Similarity=0.156  Sum_probs=45.1

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      ++.+++||||||+++...                             +  -+-..+-|+.|. +...+++.|+-+..-+.
T Consensus         1 ~KLIftDLDGTLLd~~~~-----------------------------~--~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~   49 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFN-----------------------------S--YGAARQALAALERRSIPLVLYSLRTRAQLE   49 (302)
T ss_pred             CcEEEEeCCCCCcCCCCc-----------------------------C--CHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            367899999999986421                             1  234677888887 67999999999999888


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+.+.+...
T Consensus        50 ~l~~~Lgl~   58 (302)
T PRK12702         50 HLCRQLRLE   58 (302)
T ss_pred             HHHHHhCCC
Confidence            999988765

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.97  E-value=0.015  Score=48.25  Aligned_cols=56  Identities=14%  Similarity=0.103  Sum_probs=39.9

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.++||+||||++.....                            -..=|+..++++.+. +...+++.|+.+..-...
T Consensus         2 k~i~~D~DGtl~~~~~~~----------------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~   53 (257)
T TIGR01458         2 KGVLLDISGVLYISDAKS----------------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQD   53 (257)
T ss_pred             CEEEEeCCCeEEeCCCcc----------------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHH
Confidence            478999999999774210                            013589999999998 679999999876654333


Q ss_pred             HHHHh
Q psy17244        112 VADKL  116 (196)
Q Consensus       112 vl~~l  116 (196)
                      +.+.+
T Consensus        54 ~~~~l   58 (257)
T TIGR01458        54 LLERL   58 (257)
T ss_pred             HHHHH
Confidence            33333

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=95.77  E-value=0.023  Score=45.34  Aligned_cols=53  Identities=15%  Similarity=0.132  Sum_probs=40.0

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      +++||||||+++..                               ...|-..+-|+.+. +...+++-|.-+...+..++
T Consensus         1 i~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~   49 (225)
T TIGR01482         1 IASDIDGTLTDPNR-------------------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALA   49 (225)
T ss_pred             CeEeccCccCCCCc-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH
Confidence            57999999997641                               12345566777776 56889999988888888888


Q ss_pred             HHhcC
Q psy17244        114 DKLDA  118 (196)
Q Consensus       114 ~~ldp  118 (196)
                      +.++.
T Consensus        50 ~~l~~   54 (225)
T TIGR01482        50 KLIGT   54 (225)
T ss_pred             HHhCC
Confidence            88873

catalyze the same reaction as SPP.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=95.70  E-value=0.025  Score=47.17  Aligned_cols=61  Identities=16%  Similarity=0.057  Sum_probs=44.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCchhh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASMEIY  108 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~~y  108 (196)
                      .+..+++|+||||+.....+.        .                  ...-|.+.+-|+.|++  ...++|-|.-+..-
T Consensus        13 ~~~li~~D~DGTLl~~~~~p~--------~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~   66 (266)
T PRK10187         13 ANYAWFFDLDGTLAEIKPHPD--------Q------------------VVVPDNILQGLQLLATANDGALALISGRSMVE   66 (266)
T ss_pred             CCEEEEEecCCCCCCCCCCcc--------c------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHH
Confidence            467899999999997643211        0                  2334778888888874  57888888888888


Q ss_pred             HHHHHHHhc
Q psy17244        109 GAAVADKLD  117 (196)
Q Consensus       109 a~~vl~~ld  117 (196)
                      +..+++.++
T Consensus        67 ~~~~~~~~~   75 (266)
T PRK10187         67 LDALAKPYR   75 (266)
T ss_pred             HHHhcCccc
Confidence            877776553

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=95.65  E-value=0.019  Score=45.31  Aligned_cols=54  Identities=20%  Similarity=0.199  Sum_probs=43.1

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAV  112 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~v  112 (196)
                      .+++|+||||+....                              ....|.+.+.|++|.+ ...++|-|..+...+..+
T Consensus         1 li~~D~DgTL~~~~~------------------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~   50 (204)
T TIGR01484         1 LLFFDLDGTLLDPNA------------------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKEL   50 (204)
T ss_pred             CEEEeCcCCCcCCCC------------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence            378999999997421                              1235788899999984 589999999999999999


Q ss_pred             HHHhc
Q psy17244        113 ADKLD  117 (196)
Q Consensus       113 l~~ld  117 (196)
                      ++.++
T Consensus        51 ~~~~~   55 (204)
T TIGR01484        51 LKQLP   55 (204)
T ss_pred             HHhCC
Confidence            98753

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.64  E-value=0.029  Score=46.89  Aligned_cols=43  Identities=16%  Similarity=0.136  Sum_probs=34.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      +.+++|+||||++..                                ..-||+.++|+++. +...+++-|+++..
T Consensus         3 ~~~~~D~DGtl~~~~--------------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns~~   46 (279)
T TIGR01452         3 QGFIFDCDGVLWLGE--------------------------------RVVPGAPELLDRLARAGKAALFVTNNSTK   46 (279)
T ss_pred             cEEEEeCCCceEcCC--------------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence            478999999998753                                12478999999998 57899999986644

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=95.64  E-value=0.027  Score=46.31  Aligned_cols=54  Identities=17%  Similarity=0.133  Sum_probs=43.0

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      +++||||||+++...                               .-+...+.++.+. +...+++-|.-+...+..++
T Consensus         2 i~~DlDGTll~~~~~-------------------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~   50 (256)
T TIGR01486         2 IFTDLDGTLLDPHGY-------------------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLR   50 (256)
T ss_pred             EEEcCCCCCcCCCCc-------------------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence            789999999976420                               1234688999998 57999999999999999999


Q ss_pred             HHhcCC
Q psy17244        114 DKLDAR  119 (196)
Q Consensus       114 ~~ldp~  119 (196)
                      +.++..
T Consensus        51 ~~~~~~   56 (256)
T TIGR01486        51 KELGLE   56 (256)
T ss_pred             HHcCCC
Confidence            988743

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=95.51  E-value=0.035  Score=42.50  Aligned_cols=50  Identities=18%  Similarity=0.312  Sum_probs=42.4

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY  128 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~  128 (196)
                      .+..+||+.++++.+. +.+.++|.|++...+++.+++.++.. .+++..+.
T Consensus        71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~-~~~~~~~~  121 (177)
T TIGR01488        71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID-DVFANRLE  121 (177)
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc-hheeeeEE
Confidence            3567999999999997 67999999999999999999998776 46665544

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PTZ00174 phosphomannomutase; Provisional

Probab=95.47  E-value=0.027  Score=46.27  Aligned_cols=53  Identities=17%  Similarity=0.142  Sum_probs=36.8

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.+++||||||+++..                               ..-|...+-|+.+. ++..++|-|.-+..-+
T Consensus         4 ~~klia~DlDGTLL~~~~-------------------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i   52 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPRN-------------------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKI   52 (247)
T ss_pred             CCeEEEEECcCCCcCCCC-------------------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            457899999999997752                               12355667777776 5688888888766545


Q ss_pred             HHHHH
Q psy17244        110 AAVAD  114 (196)
Q Consensus       110 ~~vl~  114 (196)
                      ...+.
T Consensus        53 ~~~l~   57 (247)
T PTZ00174         53 KEQLG   57 (247)
T ss_pred             HHHHh
Confidence            44443

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=95.47  E-value=0.022  Score=48.83  Aligned_cols=53  Identities=11%  Similarity=0.102  Sum_probs=40.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-----CceEEEEcCCc--
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-----WYELVVFTASM--  105 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-----~yei~I~T~~~--  105 (196)
                      +.++||+||||+++..                                .-|++.++++.+..     ...+.+.|++.  
T Consensus         1 ~~~ifD~DGvL~~g~~--------------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~   48 (321)
T TIGR01456         1 FGFAFDIDGVLFRGKK--------------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGF   48 (321)
T ss_pred             CEEEEeCcCceECCcc--------------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCC
Confidence            3689999999998752                                16899999999985     88999999885  


Q ss_pred             --hhhHHHHHHHhc
Q psy17244        106 --EIYGAAVADKLD  117 (196)
Q Consensus       106 --~~ya~~vl~~ld  117 (196)
                        +.+++.+.+.++
T Consensus        49 s~~~~~~~l~~~lG   62 (321)
T TIGR01456        49 SERARAEEISSLLG   62 (321)
T ss_pred             CHHHHHHHHHHHcC
Confidence              445665545443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.37  E-value=0.036  Score=45.65  Aligned_cols=50  Identities=20%  Similarity=0.292  Sum_probs=36.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++|+||||+....                                .=|+..++|+++. +...+++-|+++.+-...
T Consensus         2 ~~~~~D~DGtl~~~~~--------------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~   49 (249)
T TIGR01457         2 KGYLIDLDGTMYKGKE--------------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPES   49 (249)
T ss_pred             CEEEEeCCCceEcCCe--------------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence            3789999999997631                                1268899999998 679999999755333333


Q ss_pred             HHH
Q psy17244        112 VAD  114 (196)
Q Consensus       112 vl~  114 (196)
                      +..
T Consensus        50 ~~~   52 (249)
T TIGR01457        50 VAE   52 (249)
T ss_pred             HHH
Confidence            333

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=95.00  E-value=0.043  Score=43.08  Aligned_cols=85  Identities=16%  Similarity=0.163  Sum_probs=58.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEe-cC-----------CCCCCC--Cccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYR-QH-----------CTPELG--SYTKDL  143 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r-~~-----------c~~~~~--~~~KdL  143 (196)
                      ...+|++.++++.+. +.+.++|-|++...+++.+++.++.. .+|...+.. ++           |.....  ....-+
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~-~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~  164 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID-NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL  164 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc-ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence            457999999999997 57999999999999999999999876 466553322 11           110000  011112


Q ss_pred             cccCCCCCcEEEEECCCcccc
Q psy17244        144 SAISPDLSSIFILDNSPGAYR  164 (196)
Q Consensus       144 ~~l~~~~~~~iiIDD~~~~~~  164 (196)
                      +..+.++++++.+-|++.-..
T Consensus       165 ~~~~~~~~~~~~~gDs~~D~~  185 (202)
T TIGR01490       165 AEEQIDLKDSYAYGDSISDLP  185 (202)
T ss_pred             HHcCCCHHHcEeeeCCcccHH
Confidence            334667788899999887543

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=94.89  E-value=0.051  Score=45.59  Aligned_cols=55  Identities=20%  Similarity=0.203  Sum_probs=43.9

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +..++++||||||++-.                                ..=||+.+||++|. +.-.+++-||++.+-.
T Consensus         7 ~y~~~l~DlDGvl~~G~--------------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~   54 (269)
T COG0647           7 KYDGFLFDLDGVLYRGN--------------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSR   54 (269)
T ss_pred             hcCEEEEcCcCceEeCC--------------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCH
Confidence            45578999999999664                                22499999999998 5699999999987766


Q ss_pred             HHHHHHhc
Q psy17244        110 AAVADKLD  117 (196)
Q Consensus       110 ~~vl~~ld  117 (196)
                      +.+.++|.
T Consensus        55 ~~~~~~L~   62 (269)
T COG0647          55 EVVAARLS   62 (269)
T ss_pred             HHHHHHHH
Confidence            66666554

>KOG3120|consensus

Probab=94.89  E-value=0.04  Score=44.86  Aligned_cols=56  Identities=7%  Similarity=0.269  Sum_probs=45.0

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE  135 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~  135 (196)
                      +..-||+-+.++.+++  .||++|-|-+..-+.+.++++.+.. .+|+.+++...|...
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~-d~F~~IfTNPa~~da  140 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH-DLFSEIFTNPACVDA  140 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH-HHHHHHhcCCcccCC
Confidence            6678999999999984  4899999999999999999998875 566665555544443

>PLN02887 hydrolase family protein

Probab=94.86  E-value=0.049  Score=50.46  Aligned_cols=58  Identities=17%  Similarity=0.096  Sum_probs=44.8

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      .+.+.+++||||||+++..                               ..-|...+-|+.+. ++..++|.|.-...-
T Consensus       306 ~~iKLIa~DLDGTLLn~d~-------------------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~  354 (580)
T PLN02887        306 PKFSYIFCDMDGTLLNSKS-------------------------------QISETNAKALKEALSRGVKVVIATGKARPA  354 (580)
T ss_pred             cCccEEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHH
Confidence            4668999999999997632                               12344567777776 689999999998888


Q ss_pred             HHHHHHHhcC
Q psy17244        109 GAAVADKLDA  118 (196)
Q Consensus       109 a~~vl~~ldp  118 (196)
                      +..+++.++.
T Consensus       355 i~~~l~~L~l  364 (580)
T PLN02887        355 VIDILKMVDL  364 (580)
T ss_pred             HHHHHHHhCc
Confidence            8888888764

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=94.77  E-value=0.056  Score=44.29  Aligned_cols=60  Identities=20%  Similarity=0.089  Sum_probs=41.5

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~  110 (196)
                      |..|+.||||||+++....                            -...|.+.+.++.+.+ .-.+++-|.-+..-+.
T Consensus         1 ~~li~tDlDGTLl~~~~~~----------------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~   52 (249)
T TIGR01485         1 RLLLVSDLDNTLVDHTDGD----------------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYK   52 (249)
T ss_pred             CeEEEEcCCCcCcCCCCCC----------------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHH
Confidence            4578899999999753110                            2335778888888774 4477777777777777


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.+.+.
T Consensus        53 ~~~~~~~~~   61 (249)
T TIGR01485        53 ELQKQKPLL   61 (249)
T ss_pred             HHHhcCCCC
Confidence            787766543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01675 plant-AP plant acid phosphatase

Probab=94.28  E-value=0.11  Score=42.61  Aligned_cols=96  Identities=14%  Similarity=0.038  Sum_probs=54.8

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCC-CCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITR-PTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME  106 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~  106 (196)
                      ..+|..+|||+|+|+++...-.... ....+.....+.--+      ..---..-|++.+|++.+. ++++|++.|.-+.
T Consensus        74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv------~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e  147 (229)
T TIGR01675        74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWL------GKGAAPALPEGLKLYQKIIELGIKIFLLSGRWE  147 (229)
T ss_pred             CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHH------HcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence            3588999999999999886411000 000000000000000      0001356799999999996 7899999999988


Q ss_pred             hhHHHHHHHhcCCCc-eeeEEEEec
Q psy17244        107 IYGAAVADKLDARRH-ILRRRYYRQ  130 (196)
Q Consensus       107 ~ya~~vl~~ldp~~~-~f~~~l~r~  130 (196)
                      .......+.|...+- -..+.+-|.
T Consensus       148 ~~r~~T~~nL~~~G~~~~~~LiLR~  172 (229)
T TIGR01675       148 ELRNATLDNLINAGFTGWKHLILRG  172 (229)
T ss_pred             HHHHHHHHHHHHcCCCCcCeeeecC
Confidence            775555555533310 124556664

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=94.26  E-value=0.064  Score=43.78  Aligned_cols=48  Identities=19%  Similarity=0.277  Sum_probs=35.8

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh----hH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI----YG  109 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~----ya  109 (196)
                      ++||+||||++...                                .=|++.+++..+. +.+.+.+-|+++.+    ++
T Consensus         1 ~lfD~DGvL~~~~~--------------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~   48 (236)
T TIGR01460         1 FLFDIDGVLWLGHK--------------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYA   48 (236)
T ss_pred             CEEeCcCccCcCCc--------------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHH
Confidence            47999999998752                                1368999999997 56999999977643    44


Q ss_pred             HHHHH
Q psy17244        110 AAVAD  114 (196)
Q Consensus       110 ~~vl~  114 (196)
                      +.+.+
T Consensus        49 ~~l~~   53 (236)
T TIGR01460        49 EKLSS   53 (236)
T ss_pred             HHHHH
Confidence            44444

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=94.21  E-value=0.13  Score=48.49  Aligned_cols=59  Identities=19%  Similarity=0.112  Sum_probs=45.1

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      ..++.+++||||||+++...                             +.  +...+-|+.+. +...+++.|.-+...
T Consensus       414 ~~~KLIfsDLDGTLLd~d~~-----------------------------i~--~~t~eAL~~L~ekGI~~VIATGRs~~~  462 (694)
T PRK14502        414 QFKKIVYTDLDGTLLNPLTY-----------------------------SY--STALDALRLLKDKELPLVFCSAKTMGE  462 (694)
T ss_pred             ceeeEEEEECcCCCcCCCCc-----------------------------cC--HHHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence            46677888999999986421                             11  23456777787 679999999999999


Q ss_pred             HHHHHHHhcCC
Q psy17244        109 GAAVADKLDAR  119 (196)
Q Consensus       109 a~~vl~~ldp~  119 (196)
                      +..+++.++..
T Consensus       463 i~~l~~~Lgl~  473 (694)
T PRK14502        463 QDLYRNELGIK  473 (694)
T ss_pred             HHHHHHHcCCC
Confidence            99999988753

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=94.16  E-value=0.11  Score=43.08  Aligned_cols=101  Identities=10%  Similarity=0.093  Sum_probs=65.8

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEE-----------EecCCCC-----------
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRY-----------YRQHCTP-----------  134 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l-----------~r~~c~~-----------  134 (196)
                      ....=|.+.++++.++ +...++..|+..+.+...-++.|-.-+--|+...           +...+..           
T Consensus        79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft  158 (252)
T PF11019_consen   79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT  158 (252)
T ss_pred             eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence            4566789999999998 7899999999999998888777632211111111           1111111           


Q ss_pred             ---CCC-CccccccccCCCCCcEEEEECCCcccc----CCCCceEeeceecC
Q psy17244        135 ---ELG-SYTKDLSAISPDLSSIFILDNSPGAYR----GFPDNAIPIKSWFS  178 (196)
Q Consensus       135 ---~~~-~~~KdL~~l~~~~~~~iiIDD~~~~~~----~~~~N~I~v~~f~~  178 (196)
                         ++| ....=|..+|..++.+|+|||+.....    .....+|..-.|..
T Consensus       159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y  210 (252)
T PF11019_consen  159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY  210 (252)
T ss_pred             CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence               112 223456777999999999999997442    23346776666664

The function is not known.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=94.03  E-value=0.11  Score=40.75  Aligned_cols=81  Identities=14%  Similarity=0.170  Sum_probs=61.0

Q ss_pred             EEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCc-eeeEEEEecCCCCCCCCccccccccCCCCCcE
Q psy17244         76 RFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRH-ILRRRYYRQHCTPELGSYTKDLSAISPDLSSI  153 (196)
Q Consensus        76 ~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~-~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~  153 (196)
                      ...-..||++.++|++|.+ .+.++|.|......|..+.+.++.... +|....    +......+.+-++.++.+++.|
T Consensus       123 ~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~kP~~k~~~~~i~~l~~~~~~v  198 (215)
T PF00702_consen  123 GLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GKPEPKIFLRIIKELQVKPGEV  198 (215)
T ss_dssp             EEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TTTHHHHHHHHHHHHTCTGGGE
T ss_pred             eecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----ccccchhHHHHHHHHhcCCCEE
Confidence            4456789999999999985 699999999999999999999987421 232211    2222224456777788788899


Q ss_pred             EEEECCC
Q psy17244        154 FILDNSP  160 (196)
Q Consensus       154 iiIDD~~  160 (196)
                      ++|=|..
T Consensus       199 ~~vGDg~  205 (215)
T PF00702_consen  199 AMVGDGV  205 (215)
T ss_dssp             EEEESSG
T ss_pred             EEEccCH
Confidence            9999876

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=93.97  E-value=0.17  Score=40.16  Aligned_cols=41  Identities=10%  Similarity=0.252  Sum_probs=37.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR  119 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~  119 (196)
                      ++.+||.++|.+++. +...++|-|+|+..|..++++.+..+
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk  113 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK  113 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence            789999999999998 67999999999999999999998643

>PLN02423 phosphomannomutase

Probab=93.80  E-value=0.12  Score=42.43  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=30.2

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCc
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASM  105 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~  105 (196)
                      +..+++||||||+++..                               ..-|...+.++++.+...+++.|..+
T Consensus         7 ~~i~~~D~DGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~i~fviaTGR~   49 (245)
T PLN02423          7 GVIALFDVDGTLTAPRK-------------------------------EATPEMLEFMKELRKVVTVGVVGGSD   49 (245)
T ss_pred             ceEEEEeccCCCcCCCC-------------------------------cCCHHHHHHHHHHHhCCEEEEECCcC
Confidence            34555999999997642                               12466678888888667777777653

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=93.57  E-value=0.2  Score=46.21  Aligned_cols=84  Identities=12%  Similarity=0.172  Sum_probs=58.7

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-CCCCccccccccCCCCCcEE
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~~~~i  154 (196)
                      +.-..||++.+++++|. ..++++|-|+..+.+++.+++.++.+  ++.      .+.. ++...   ++.+....++++
T Consensus       402 ~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~------~~~p~~K~~~---v~~l~~~~~~v~  470 (562)
T TIGR01511       402 LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA------EVLPDDKAAL---IKELQEKGRVVA  470 (562)
T ss_pred             ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc------cCChHHHHHH---HHHHHHcCCEEE
Confidence            34678999999999998 57999999999999999999999874  332      1211 12122   233334568899


Q ss_pred             EEECCCccccCCCCceE
Q psy17244        155 ILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I  171 (196)
                      +|-|...-...-...++
T Consensus       471 ~VGDg~nD~~al~~A~v  487 (562)
T TIGR01511       471 MVGDGINDAPALAQADV  487 (562)
T ss_pred             EEeCCCccHHHHhhCCE
Confidence            99999875543333334

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>KOG3085|consensus

Probab=93.37  E-value=0.053  Score=44.63  Aligned_cols=95  Identities=9%  Similarity=-0.050  Sum_probs=70.0

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC---CCCccccccccCCCCCc
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE---LGSYTKDLSAISPDLSS  152 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~---~~~~~KdL~~l~~~~~~  152 (196)
                      .+....|-+ ++|+.+. +.+.|.|.|+...++= .++..++.. .+|++++..-..+..   ...|.+-|++++..|+.
T Consensus       111 ~~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee  187 (237)
T KOG3085|consen  111 AWKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE  187 (237)
T ss_pred             CceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH
Confidence            344555555 9999998 7899999999998876 777777776 688887643223333   34788999999999999


Q ss_pred             EEEEECCCcc-ccCCC---CceEeec
Q psy17244        153 IFILDNSPGA-YRGFP---DNAIPIK  174 (196)
Q Consensus       153 ~iiIDD~~~~-~~~~~---~N~I~v~  174 (196)
                      +|.|||+... +....   -++|.|.
T Consensus       188 ~vhIgD~l~nD~~gA~~~G~~ailv~  213 (237)
T KOG3085|consen  188 CVHIGDLLENDYEGARNLGWHAILVD  213 (237)
T ss_pred             eEEecCccccccHhHHHcCCEEEEEc
Confidence            9999999987 54333   3455544

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=93.28  E-value=0.042  Score=43.25  Aligned_cols=15  Identities=33%  Similarity=0.563  Sum_probs=13.4

Q ss_pred             EEEEeCCCceeeeec
Q psy17244         34 VLVLDLDETLIHSHH   48 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~   48 (196)
                      .+|||+||||++|..
T Consensus         2 ~viFD~DGTLiDs~~   16 (197)
T TIGR01548         2 ALVLDMDGVMADVSQ   16 (197)
T ss_pred             ceEEecCceEEechH
Confidence            589999999999974

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=93.27  E-value=0.16  Score=42.49  Aligned_cols=60  Identities=12%  Similarity=0.026  Sum_probs=47.8

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCce--EEEEcCCch
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYE--LVVFTASME  106 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~ye--i~I~T~~~~  106 (196)
                      ..++.+++||.||||......+.                          -...=+++.+.|..|+..+.  ++|.|--+.
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~p~--------------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~   68 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPHPE--------------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSL   68 (266)
T ss_pred             cccceEEEEeccccccccccCcc--------------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence            45788999999999998875431                          14556788999999998877  888888888


Q ss_pred             hhHHHHHH
Q psy17244        107 IYGAAVAD  114 (196)
Q Consensus       107 ~ya~~vl~  114 (196)
                      .-.+..+.
T Consensus        69 ~~l~~~~~   76 (266)
T COG1877          69 AELERLFG   76 (266)
T ss_pred             HHHHHhcC
Confidence            88888777

>PLN02151 trehalose-phosphatase

Probab=93.27  E-value=0.16  Score=44.24  Aligned_cols=59  Identities=14%  Similarity=0.106  Sum_probs=45.3

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG  109 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya  109 (196)
                      .++..|+||+||||+--...+        .                  .+..-|.+.+-|+.|++.+.++|-|--...-+
T Consensus        96 ~~~~ll~lDyDGTL~PIv~~P--------~------------------~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l  149 (354)
T PLN02151         96 GKQIVMFLDYDGTLSPIVDDP--------D------------------RAFMSKKMRNTVRKLAKCFPTAIVSGRCREKV  149 (354)
T ss_pred             CCceEEEEecCccCCCCCCCc--------c------------------cccCCHHHHHHHHHHhcCCCEEEEECCCHHHH
Confidence            366789999999999544221        1                  14567889999999998889999998888877


Q ss_pred             HHHHH
Q psy17244        110 AAVAD  114 (196)
Q Consensus       110 ~~vl~  114 (196)
                      +.++.
T Consensus       150 ~~~~~  154 (354)
T PLN02151        150 SSFVK  154 (354)
T ss_pred             HHHcC
Confidence            77765

>PLN02580 trehalose-phosphatase

Probab=92.85  E-value=0.21  Score=44.03  Aligned_cols=61  Identities=15%  Similarity=0.074  Sum_probs=48.7

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIY  108 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~y  108 (196)
                      ..++..|+||.||||.--...+        .                  -+..-|++.+-|+.|++.+.++|-|--...-
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~~P--------d------------------~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~  169 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVDDP--------D------------------RALMSDAMRSAVKNVAKYFPTAIISGRSRDK  169 (384)
T ss_pred             hcCCeEEEEecCCccCCCCCCc--------c------------------cccCCHHHHHHHHHHhhCCCEEEEeCCCHHH
Confidence            3467789999999998654321        1                  1566789999999999989999999999888


Q ss_pred             HHHHHHH
Q psy17244        109 GAAVADK  115 (196)
Q Consensus       109 a~~vl~~  115 (196)
                      ++.++..
T Consensus       170 L~~~l~~  176 (384)
T PLN02580        170 VYELVGL  176 (384)
T ss_pred             HHHHhCC
Confidence            8888764

>PLN03017 trehalose-phosphatase

Probab=92.65  E-value=0.24  Score=43.34  Aligned_cols=60  Identities=15%  Similarity=0.036  Sum_probs=44.4

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG  109 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya  109 (196)
                      .++..|+||+||||+--...+.                          ....-|.+.+-|++|++.+.++|-|--+..-+
T Consensus       109 ~k~~llflD~DGTL~Piv~~p~--------------------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l  162 (366)
T PLN03017        109 GKQIVMFLDYDGTLSPIVDDPD--------------------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKV  162 (366)
T ss_pred             CCCeEEEEecCCcCcCCcCCcc--------------------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHH
Confidence            3677889999999994432110                          02445788889999998899999998888888


Q ss_pred             HHHHHH
Q psy17244        110 AAVADK  115 (196)
Q Consensus       110 ~~vl~~  115 (196)
                      ..+++.
T Consensus       163 ~~~~~l  168 (366)
T PLN03017        163 YNFVKL  168 (366)
T ss_pred             HHhhcc
Confidence            877543

>TIGR00685 T6PP trehalose-phosphatase

Probab=92.38  E-value=0.13  Score=42.11  Aligned_cols=17  Identities=24%  Similarity=0.436  Sum_probs=14.2

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      ++..|+||+||||+...
T Consensus         2 ~~~~l~lD~DGTL~~~~   18 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIV   18 (244)
T ss_pred             CcEEEEEecCccccCCc
Confidence            56789999999999654

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=92.30  E-value=0.91  Score=39.46  Aligned_cols=53  Identities=19%  Similarity=0.192  Sum_probs=44.7

Q ss_pred             EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh-c-----C-CCceeeEEEE
Q psy17244         76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL-D-----A-RRHILRRRYY  128 (196)
Q Consensus        76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l-d-----p-~~~~f~~~l~  128 (196)
                      .-|+.+-||+.++|+.+. +...+.|-|++...|++.+++.+ +     + ...+|+.++.
T Consensus       180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt  240 (343)
T TIGR02244       180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV  240 (343)
T ss_pred             HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence            447888999999999997 67999999999999999999997 5     2 3468876653

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=92.13  E-value=0.088  Score=41.41  Aligned_cols=16  Identities=25%  Similarity=0.355  Sum_probs=13.7

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.|+|||||||+++..
T Consensus         1 k~viFDlDGTL~d~~~   16 (203)
T TIGR02252         1 KLITFDAVGTLLALKE   16 (203)
T ss_pred             CeEEEecCCceeeeCC
Confidence            3789999999999853

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=92.00  E-value=0.19  Score=41.07  Aligned_cols=82  Identities=17%  Similarity=0.082  Sum_probs=46.3

Q ss_pred             CCCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      .+++.+|||+|||+++...... ........+..++.--+ ..+  .   -..=||+.+|++.+. .+++|++-|.-...
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv-~~~--~---~~aip~a~~l~~~~~~~G~~V~~iT~R~~~  143 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV-ASG--K---APAIPGALELYNYARSRGVKVFFITGRPES  143 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH-HCT--G---GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH-hcc--c---CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence            5788999999999996543100 00000000000000000 000  0   133488999999998 68999999988777


Q ss_pred             hHHHHHHHhc
Q psy17244        108 YGAAVADKLD  117 (196)
Q Consensus       108 ya~~vl~~ld  117 (196)
                      .-+.-++.|.
T Consensus       144 ~r~~T~~nL~  153 (229)
T PF03767_consen  144 QREATEKNLK  153 (229)
T ss_dssp             CHHHHHHHHH
T ss_pred             hHHHHHHHHH
Confidence            6555555554

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=91.96  E-value=0.074  Score=41.26  Aligned_cols=14  Identities=43%  Similarity=0.558  Sum_probs=12.7

Q ss_pred             EEEEeCCCceeeee
Q psy17244         34 VLVLDLDETLIHSH   47 (196)
Q Consensus        34 ~LVLDLD~TLv~s~   47 (196)
                      .++|||||||+++.
T Consensus         2 ~viFDlDGTL~ds~   15 (184)
T TIGR01993         2 VWFFDLDNTLYPHS   15 (184)
T ss_pred             eEEEeCCCCCCCCc
Confidence            58999999999985

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=91.80  E-value=0.15  Score=42.02  Aligned_cols=79  Identities=19%  Similarity=0.124  Sum_probs=46.8

Q ss_pred             CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEE-----EEeeCccHHHHHHHhh-hCceEEEE
Q psy17244         28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRF-----FVHKRPHVDFFLDIVS-QWYELVVF  101 (196)
Q Consensus        28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~v~~RP~l~eFL~~l~-~~yei~I~  101 (196)
                      ...+++.+|+|||||.++-+.-....    -.....|.-      ..+..     --+.=||+.|||+++- ++-.|.--
T Consensus        75 ~k~K~~aVvlDlDETvLdNs~Yqgy~----v~nnk~f~p------e~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyi  144 (274)
T COG2503          75 KKGKKKAVVLDLDETVLDNSAYQGYQ----VLNNKGFTP------ETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYI  144 (274)
T ss_pred             ccCCCceEEEecchHhhcCccccchh----hhcCCCCCc------cchHHHHhhcccccCccHHHHHHHHHhcCcEEEEE
Confidence            34567799999999999987533211    000111100      00111     1345699999999997 56677666


Q ss_pred             cCCchhh-HHHHHHHh
Q psy17244        102 TASMEIY-GAAVADKL  116 (196)
Q Consensus       102 T~~~~~y-a~~vl~~l  116 (196)
                      |+-..+. ...-++.|
T Consensus       145 SNR~~~~~~~~T~~nL  160 (274)
T COG2503         145 SNRDQENEKDGTIENL  160 (274)
T ss_pred             eccchhcccchhHHHH
Confidence            7766666 55555544

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=91.77  E-value=0.09  Score=43.52  Aligned_cols=16  Identities=13%  Similarity=0.200  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      -++++||+||||+++.
T Consensus         4 ~k~vIFDlDGTLiDs~   19 (267)
T PRK13478          4 IQAVIFDWAGTTVDFG   19 (267)
T ss_pred             eEEEEEcCCCCeecCC
Confidence            4689999999999984

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=91.67  E-value=0.08  Score=40.78  Aligned_cols=16  Identities=19%  Similarity=0.574  Sum_probs=14.2

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.++||+||||+++..
T Consensus         2 ~~iiFD~DGTL~ds~~   17 (185)
T TIGR02009         2 KAVIFDMDGVIVDTAP   17 (185)
T ss_pred             CeEEEcCCCcccCChH
Confidence            5799999999999964

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=91.58  E-value=0.11  Score=42.58  Aligned_cols=15  Identities=13%  Similarity=0.259  Sum_probs=13.5

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      ++++||+||||+++.
T Consensus         3 k~viFD~DGTLiDs~   17 (253)
T TIGR01422         3 EAVIFDWAGTTVDFG   17 (253)
T ss_pred             eEEEEeCCCCeecCC
Confidence            589999999999984

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=91.54  E-value=0.094  Score=41.70  Aligned_cols=16  Identities=44%  Similarity=0.731  Sum_probs=14.1

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.++||+||||+++..
T Consensus         3 ~~viFDlDGTL~ds~~   18 (221)
T TIGR02253         3 KAIFFDLDDTLIDTSG   18 (221)
T ss_pred             eEEEEeCCCCCcCCCC
Confidence            5799999999999864

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=91.45  E-value=0.087  Score=43.23  Aligned_cols=17  Identities=29%  Similarity=0.440  Sum_probs=14.7

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      -+.++||+||||++|..
T Consensus        22 ~k~viFDlDGTLiDs~~   38 (248)
T PLN02770         22 LEAVLFDVDGTLCDSDP   38 (248)
T ss_pred             cCEEEEcCCCccCcCHH
Confidence            36899999999999964

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=91.43  E-value=0.1  Score=42.20  Aligned_cols=18  Identities=28%  Similarity=0.433  Sum_probs=15.2

Q ss_pred             CCCeEEEEeCCCceeeee
Q psy17244         30 VKRKVLVLDLDETLIHSH   47 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~   47 (196)
                      ++.+.+||||||||+++.
T Consensus         8 ~~~k~vIFDlDGTL~d~~   25 (224)
T PRK14988          8 QDVDTVLLDMDGTLLDLA   25 (224)
T ss_pred             ccCCEEEEcCCCCccchh
Confidence            356789999999999964

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=91.18  E-value=0.11  Score=42.43  Aligned_cols=16  Identities=38%  Similarity=0.576  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      -+.++|||||||+++.
T Consensus        10 ~k~iiFDlDGTL~D~~   25 (238)
T PRK10748         10 ISALTFDLDDTLYDNR   25 (238)
T ss_pred             ceeEEEcCcccccCCh
Confidence            3689999999999985

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=91.07  E-value=0.13  Score=43.37  Aligned_cols=17  Identities=24%  Similarity=0.444  Sum_probs=15.2

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      +-+.+|||+||||+++.
T Consensus        39 ~~k~VIFDlDGTLvDS~   55 (286)
T PLN02779         39 LPEALLFDCDGVLVETE   55 (286)
T ss_pred             CCcEEEEeCceeEEccc
Confidence            44689999999999998

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=91.02  E-value=0.85  Score=34.75  Aligned_cols=85  Identities=16%  Similarity=0.325  Sum_probs=52.2

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhh--HHHHHHHhcCCCcee--eEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIY--GAAVADKLDARRHIL--RRRYYRQHCTPELGSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~y--a~~vl~~ldp~~~~f--~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i  154 (196)
                      ...-||+++-+++|.+.|+++|.|+++..+  ...-.+.|--.-.++  +++++   |+.      |.+=      +-=+
T Consensus        67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vf---Cgn------Kniv------kaDi  131 (180)
T COG4502          67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVF---CGN------KNIV------KADI  131 (180)
T ss_pred             cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEE---ecC------CCeE------EeeE
Confidence            456799999999999999999999995433  222222221100001  12222   332      2221      2337


Q ss_pred             EEECCCccccCCCCceEeeceecC
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +|||.|.......+|-|.-..-..
T Consensus       132 lIDDnp~nLE~F~G~kIlFdA~HN  155 (180)
T COG4502         132 LIDDNPLNLENFKGNKILFDAHHN  155 (180)
T ss_pred             EecCCchhhhhccCceEEEecccc
Confidence            999999988888888777655544

>PRK11590 hypothetical protein; Provisional

Probab=90.99  E-value=0.14  Score=41.03  Aligned_cols=39  Identities=18%  Similarity=-0.028  Sum_probs=35.0

Q ss_pred             EeeCccHHHHH-HHhh-hCceEEEEcCCchhhHHHHHHHhc
Q psy17244         79 VHKRPHVDFFL-DIVS-QWYELVVFTASMEIYGAAVADKLD  117 (196)
Q Consensus        79 v~~RP~l~eFL-~~l~-~~yei~I~T~~~~~ya~~vl~~ld  117 (196)
                      +..+||+.+.| +.+. +.+.++|-|++...+++++++.+.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~  134 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP  134 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence            45699999999 5677 689999999999999999999877

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=90.80  E-value=0.45  Score=43.83  Aligned_cols=86  Identities=10%  Similarity=0.099  Sum_probs=61.6

Q ss_pred             EEEeeCccHHHHHHHhh-hC-ceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244         77 FFVHKRPHVDFFLDIVS-QW-YELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~-yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i  154 (196)
                      .....|||+.+.|++|. +. ++++|-|+..+.+++.+++.++.. .+|...     ...++   .+-++.++...++++
T Consensus       381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-~~f~~~-----~p~~K---~~~v~~l~~~~~~v~  451 (556)
T TIGR01525       381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-EVHAEL-----LPEDK---LAIVKELQEEGGVVA  451 (556)
T ss_pred             ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-eeeccC-----CHHHH---HHHHHHHHHcCCEEE
Confidence            34678999999999997 57 999999999999999999999986 455432     11112   123444444667999


Q ss_pred             EEECCCccccCCCCceE
Q psy17244        155 ILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I  171 (196)
                      +|-|...-...-...++
T Consensus       452 ~vGDg~nD~~al~~A~v  468 (556)
T TIGR01525       452 MVGDGINDAPALAAADV  468 (556)
T ss_pred             EEECChhHHHHHhhCCE
Confidence            99999875543333334

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=90.59  E-value=0.088  Score=41.57  Aligned_cols=14  Identities=43%  Similarity=0.681  Sum_probs=12.3

Q ss_pred             EEEeCCCceeeeec
Q psy17244         35 LVLDLDETLIHSHH   48 (196)
Q Consensus        35 LVLDLD~TLv~s~~   48 (196)
                      +||||||||++|..
T Consensus         1 iiFDlDGTL~Ds~~   14 (205)
T TIGR01454         1 VVFDLDGVLVDSFA   14 (205)
T ss_pred             CeecCcCccccCHH
Confidence            58999999999964

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=90.54  E-value=0.42  Score=45.48  Aligned_cols=62  Identities=16%  Similarity=0.145  Sum_probs=45.7

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCch
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASME  106 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~  106 (196)
                      ..++..+++|+||||+.....+        .                  ....-|.+.+.|+.|++  ...++|-|.-+.
T Consensus       489 ~~~~rLi~~D~DGTL~~~~~~~--------~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~  542 (726)
T PRK14501        489 AASRRLLLLDYDGTLVPFAPDP--------E------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDR  542 (726)
T ss_pred             hccceEEEEecCccccCCCCCc--------c------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence            3467899999999999653211        0                  02335788889999986  788999999998


Q ss_pred             hhHHHHHHHh
Q psy17244        107 IYGAAVADKL  116 (196)
Q Consensus       107 ~ya~~vl~~l  116 (196)
                      ...+.++..+
T Consensus       543 ~~l~~~~~~~  552 (726)
T PRK14501        543 DTLERWFGDL  552 (726)
T ss_pred             HHHHHHhCCC
Confidence            8888777654

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=90.40  E-value=0.11  Score=38.91  Aligned_cols=14  Identities=36%  Similarity=0.717  Sum_probs=12.6

Q ss_pred             EEEEeCCCceeeee
Q psy17244         34 VLVLDLDETLIHSH   47 (196)
Q Consensus        34 ~LVLDLD~TLv~s~   47 (196)
                      +++||+||||+++.
T Consensus         1 ~iifD~DGTL~d~~   14 (154)
T TIGR01549         1 AILFDIDGTLVDSS   14 (154)
T ss_pred             CeEecCCCcccccH
Confidence            47999999999995

HAD subfamilies caused by an overly broad single model.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=89.88  E-value=0.11  Score=40.96  Aligned_cols=14  Identities=43%  Similarity=0.679  Sum_probs=12.2

Q ss_pred             EEEeCCCceeeeec
Q psy17244         35 LVLDLDETLIHSHH   48 (196)
Q Consensus        35 LVLDLD~TLv~s~~   48 (196)
                      +|||+||||++|..
T Consensus         1 viFD~DGTL~Ds~~   14 (213)
T TIGR01449         1 VLFDLDGTLVDSAP   14 (213)
T ss_pred             CeecCCCccccCHH
Confidence            58999999999864

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=89.70  E-value=0.13  Score=39.51  Aligned_cols=15  Identities=20%  Similarity=0.519  Sum_probs=13.1

Q ss_pred             EEEEeCCCceeeeec
Q psy17244         34 VLVLDLDETLIHSHH   48 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~   48 (196)
                      .+|||+||||+++..
T Consensus         1 ~iiFD~DGTL~ds~~   15 (185)
T TIGR01990         1 AVIFDLDGVITDTAE   15 (185)
T ss_pred             CeEEcCCCccccChH
Confidence            379999999999974

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=89.65  E-value=0.15  Score=38.96  Aligned_cols=14  Identities=36%  Similarity=0.589  Sum_probs=12.5

Q ss_pred             EEEeCCCceeeeec
Q psy17244         35 LVLDLDETLIHSHH   48 (196)
Q Consensus        35 LVLDLD~TLv~s~~   48 (196)
                      ++||+||||+++..
T Consensus         2 viFD~DGTL~D~~~   15 (175)
T TIGR01493         2 MVFDVYGTLVDVHG   15 (175)
T ss_pred             eEEecCCcCcccHH
Confidence            79999999999863

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=89.53  E-value=0.17  Score=40.12  Aligned_cols=16  Identities=38%  Similarity=0.692  Sum_probs=14.0

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.++||+||||+++..
T Consensus         2 k~viFD~DGTL~d~~~   17 (224)
T TIGR02254         2 KTLLFDLDDTILDFQA   17 (224)
T ss_pred             CEEEEcCcCcccccch
Confidence            4799999999999864

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=89.47  E-value=0.16  Score=39.76  Aligned_cols=16  Identities=44%  Similarity=0.590  Sum_probs=13.8

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.++||+||||+++..
T Consensus         2 k~viFD~dgTLiD~~~   17 (198)
T TIGR01428         2 KALVFDVYGTLFDVHS   17 (198)
T ss_pred             cEEEEeCCCcCccHHH
Confidence            4799999999999863

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=89.36  E-value=0.21  Score=39.55  Aligned_cols=15  Identities=27%  Similarity=0.512  Sum_probs=13.4

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +++||||||||+++.
T Consensus         3 k~viFDldGtL~d~~   17 (211)
T TIGR02247         3 KAVIFDFGGVLLPSP   17 (211)
T ss_pred             eEEEEecCCceecCH
Confidence            489999999999974

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=89.03  E-value=0.21  Score=38.86  Aligned_cols=16  Identities=38%  Similarity=0.565  Sum_probs=13.6

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+++|||+||||+.+.
T Consensus         4 ~k~viFD~DGTLid~~   19 (201)
T TIGR01491         4 IKLIIFDLDGTLTDVM   19 (201)
T ss_pred             ceEEEEeCCCCCcCCc
Confidence            4589999999999853

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PLN02382 probable sucrose-phosphatase

Probab=89.01  E-value=0.86  Score=40.54  Aligned_cols=21  Identities=43%  Similarity=0.564  Sum_probs=16.8

Q ss_pred             ccCCCCCeEEEEeCCCceeee
Q psy17244         26 RLSIVKRKVLVLDLDETLIHS   46 (196)
Q Consensus        26 ~~~~~~k~~LVLDLD~TLv~s   46 (196)
                      ++....+..|+.||||||+.+
T Consensus         3 ~~~~~~~~lI~sDLDGTLL~~   23 (413)
T PLN02382          3 RLSGSPRLMIVSDLDHTMVDH   23 (413)
T ss_pred             cccCCCCEEEEEcCCCcCcCC
Confidence            344566889999999999976

>PRK09449 dUMP phosphatase; Provisional

Probab=88.64  E-value=0.2  Score=39.92  Aligned_cols=15  Identities=40%  Similarity=0.561  Sum_probs=12.8

Q ss_pred             CeEEEEeCCCceeee
Q psy17244         32 RKVLVLDLDETLIHS   46 (196)
Q Consensus        32 k~~LVLDLD~TLv~s   46 (196)
                      -++++|||||||++.
T Consensus         3 ~k~iiFDlDGTLid~   17 (224)
T PRK09449          3 YDWILFDADETLFHF   17 (224)
T ss_pred             ccEEEEcCCCchhcc
Confidence            358999999999974

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=88.38  E-value=0.22  Score=39.53  Aligned_cols=17  Identities=35%  Similarity=0.565  Sum_probs=14.4

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      .-+.++||+||||+++.
T Consensus         5 ~~~~iiFD~DGTL~d~~   21 (226)
T PRK13222          5 DIRAVAFDLDGTLVDSA   21 (226)
T ss_pred             cCcEEEEcCCcccccCH
Confidence            34589999999999885

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=88.29  E-value=0.38  Score=40.45  Aligned_cols=93  Identities=6%  Similarity=0.003  Sum_probs=52.6

Q ss_pred             CCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcE-EEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFV-LKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~-~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      ++-.+|||+|||+++...... .....++.....+. .-+.      .---..=|++.+|.+.+. .++.|++.|.-...
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~------~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~  173 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVN------KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD  173 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHh------cccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            678999999999996543110 00000000000010 0000      001334589999999997 78999999998876


Q ss_pred             hHHHHHHHhcCCCce--eeEEEEec
Q psy17244        108 YGAAVADKLDARRHI--LRRRYYRQ  130 (196)
Q Consensus       108 ya~~vl~~ldp~~~~--f~~~l~r~  130 (196)
                      .-+.=++.|... ++  .++.+-|+
T Consensus       174 ~r~aT~~NL~ka-Gy~~~~~LiLR~  197 (275)
T TIGR01680       174 KQAVTEANLKKA-GYHTWEKLILKD  197 (275)
T ss_pred             HHHHHHHHHHHc-CCCCcceeeecC
Confidence            666666666443 22  24455564

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=87.80  E-value=0.99  Score=35.41  Aligned_cols=82  Identities=16%  Similarity=0.171  Sum_probs=45.0

Q ss_pred             EeeCccHHHHHHHhhhC-ceEEEEcCCchh-------hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCC
Q psy17244         79 VHKRPHVDFFLDIVSQW-YELVVFTASMEI-------YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~-yei~I~T~~~~~-------ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~  150 (196)
                      ...=||+.|.|+.|.+. +++++-|+....       -..+.++..-|. -....+++..+         |.  .++.| 
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D-  138 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD-  138 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence            56679999999999965 577777776544       223444444332 12223333211         22  23333 


Q ss_pred             CcEEEEECCCccccCCCCceEeecee
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                         ++|||++.........|+++.=|
T Consensus       139 ---vlIDD~~~n~~~~~~~g~~~iLf  161 (191)
T PF06941_consen  139 ---VLIDDRPHNLEQFANAGIPVILF  161 (191)
T ss_dssp             ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred             ---EEecCChHHHHhccCCCceEEEE
Confidence               89999999887666667554444

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PRK11590 hypothetical protein; Provisional

Probab=87.38  E-value=0.97  Score=36.04  Aligned_cols=17  Identities=41%  Similarity=0.679  Sum_probs=14.2

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      .++.++||+||||++..
T Consensus         5 ~~k~~iFD~DGTL~~~d   21 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD   21 (211)
T ss_pred             cceEEEEecCCCCcccc
Confidence            56799999999999543

>KOG1615|consensus

Probab=87.25  E-value=1.6  Score=35.11  Aligned_cols=85  Identities=9%  Similarity=0.167  Sum_probs=58.9

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEE-EecCCCC----------CCC---Ccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRY-YRQHCTP----------ELG---SYTKD  142 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l-~r~~c~~----------~~~---~~~Kd  142 (196)
                      ..+-||++|+...|. +...+++-|-|-...+..|.+.|+... .++...+ +-..-.+          +.+   ..+.-
T Consensus        87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~  166 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL  166 (227)
T ss_pred             CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence            467899999999998 789999999999999999999998752 2343333 2211111          111   22333


Q ss_pred             ccccCCCCCcEEEEECCCcccc
Q psy17244        143 LSAISPDLSSIFILDNSPGAYR  164 (196)
Q Consensus       143 L~~l~~~~~~~iiIDD~~~~~~  164 (196)
                      |++ +.+-+.+++|=|-..-..
T Consensus       167 lrk-~~~~~~~~mvGDGatDle  187 (227)
T KOG1615|consen  167 LRK-NYNYKTIVMVGDGATDLE  187 (227)
T ss_pred             HHh-CCChheeEEecCCccccc
Confidence            444 778888899988776544

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=87.01  E-value=0.55  Score=43.08  Aligned_cols=87  Identities=8%  Similarity=0.092  Sum_probs=63.0

Q ss_pred             EEEEeeCccHHHHHHHhh-hCc-eEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcE
Q psy17244         76 RFFVHKRPHVDFFLDIVS-QWY-ELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSI  153 (196)
Q Consensus        76 ~~~v~~RP~l~eFL~~l~-~~y-ei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~  153 (196)
                      ...-..|||+.+.+++|. +.+ +++|-|+..+.+|+.+++.++.. .+|....     ..++   .+-++.++...+++
T Consensus       358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-~~f~~~~-----p~~K---~~~i~~l~~~~~~v  428 (536)
T TIGR01512       358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-EVHAELL-----PEDK---LEIVKELREKYGPV  428 (536)
T ss_pred             EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh-hhhhccC-----cHHH---HHHHHHHHhcCCEE
Confidence            445678999999999998 578 99999999999999999999886 3553211     1111   23455556666899


Q ss_pred             EEEECCCccccCCCCceE
Q psy17244        154 FILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I  171 (196)
                      ++|-|...-...-...++
T Consensus       429 ~~vGDg~nD~~al~~A~v  446 (536)
T TIGR01512       429 AMVGDGINDAPALAAADV  446 (536)
T ss_pred             EEEeCCHHHHHHHHhCCE
Confidence            999999875543333333

.

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=86.85  E-value=0.3  Score=37.29  Aligned_cols=15  Identities=27%  Similarity=0.620  Sum_probs=12.9

Q ss_pred             EEEEeCCCceeeeec
Q psy17244         34 VLVLDLDETLIHSHH   48 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~   48 (196)
                      .++|||||||+++..
T Consensus         1 ~vlFDlDgtLv~~~~   15 (183)
T TIGR01509         1 AILFDLDGVLVDTSS   15 (183)
T ss_pred             CeeeccCCceechHH
Confidence            379999999999953

HAD subfamilies caused by an overly broad single model.

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=86.47  E-value=0.53  Score=42.94  Aligned_cols=34  Identities=24%  Similarity=0.225  Sum_probs=24.6

Q ss_pred             eecCCCCcccccccCCCCCeEEEEeCCCceeeee
Q psy17244         14 YEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSH   47 (196)
Q Consensus        14 ~~~~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~   47 (196)
                      |..-+.+|.++.........++++|+||||.++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~   37 (497)
T PLN02177          4 GASRRFEPISKCSSEGRSNQTVAADLDGTLLISR   37 (497)
T ss_pred             cccCCCCccccCCcccccccEEEEecCCcccCCC
Confidence            4445666666655555567789999999999954

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=85.84  E-value=0.31  Score=43.70  Aligned_cols=16  Identities=31%  Similarity=0.694  Sum_probs=14.3

Q ss_pred             eEEEEeCCCceeeeec
Q psy17244         33 KVLVLDLDETLIHSHH   48 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~   48 (196)
                      +.++||+||||++|..
T Consensus       242 k~vIFDlDGTLiDs~~  257 (459)
T PRK06698        242 QALIFDMDGTLFQTDK  257 (459)
T ss_pred             hheeEccCCceecchh
Confidence            5799999999999964

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=85.80  E-value=0.65  Score=36.93  Aligned_cols=96  Identities=13%  Similarity=0.124  Sum_probs=66.3

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH----HHhcCCCceeeEEEEecCCCC-CCCCccccccccCCCC
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA----DKLDARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDL  150 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl----~~ldp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~  150 (196)
                      +.-.+=|.+-+++++-. ....++|||+|+-. |+++.    +..|.. .+|+..+....-.. ..+.|.|.+..+|-++
T Consensus       100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~-~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p  177 (229)
T COG4229         100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLN-SLFSGYFDTTIGKKRESQSYAKIAGDIGLPP  177 (229)
T ss_pred             cccccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHH-hhhcceeeccccccccchhHHHHHHhcCCCc
Confidence            34556789999998886 68999999999854 33332    233444 57765554322222 1347899999999999


Q ss_pred             CcEEEEECCCccccCCCCceEeec
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ..++++-|++.-.....+-|+.+.
T Consensus       178 ~eilFLSDn~~EL~AA~~vGl~t~  201 (229)
T COG4229         178 AEILFLSDNPEELKAAAGVGLATG  201 (229)
T ss_pred             hheEEecCCHHHHHHHHhcchhee
Confidence            999999999987655555555443

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=85.79  E-value=0.34  Score=36.14  Aligned_cols=14  Identities=36%  Similarity=0.745  Sum_probs=12.3

Q ss_pred             EEEeCCCceeeeec
Q psy17244         35 LVLDLDETLIHSHH   48 (196)
Q Consensus        35 LVLDLD~TLv~s~~   48 (196)
                      |+||+||||+++..
T Consensus         1 iifD~dgtL~d~~~   14 (176)
T PF13419_consen    1 IIFDLDGTLVDTDP   14 (176)
T ss_dssp             EEEESBTTTEEHHH
T ss_pred             cEEECCCCcEeCHH
Confidence            68999999998864

...

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=85.65  E-value=2.2  Score=34.17  Aligned_cols=38  Identities=21%  Similarity=0.009  Sum_probs=33.9

Q ss_pred             EeeCccHHHHHH-Hhh-hCceEEEEcCCchhhHHHHHHHh
Q psy17244         79 VHKRPHVDFFLD-IVS-QWYELVVFTASMEIYGAAVADKL  116 (196)
Q Consensus        79 v~~RP~l~eFL~-~l~-~~yei~I~T~~~~~ya~~vl~~l  116 (196)
                      +..+||+.+.|+ .+. +...++|-|++...|++++++..
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~  132 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS  132 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence            367999999995 787 69999999999999999999773

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=85.34  E-value=0.61  Score=37.70  Aligned_cols=14  Identities=36%  Similarity=0.703  Sum_probs=11.4

Q ss_pred             EEEEeCCCceeeee
Q psy17244         34 VLVLDLDETLIHSH   47 (196)
Q Consensus        34 ~LVLDLD~TLv~s~   47 (196)
                      .+++||||||+++.
T Consensus         1 li~~DlDgTLl~~~   14 (236)
T TIGR02471         1 LIITDLDNTLLGDD   14 (236)
T ss_pred             CeEEeccccccCCH
Confidence            37889999999753

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>KOG4549|consensus

Probab=84.89  E-value=7.7  Score=29.04  Aligned_cols=79  Identities=13%  Similarity=-0.032  Sum_probs=54.5

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIY  108 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~y  108 (196)
                      ...+++||||-||+-.-...++.-.++|....         ....+.-...=|...--|..|+ +..++++.|.+ .+.+
T Consensus         4 ~p~~~~fdldytiwP~~vdthl~~pfkP~k~~---------~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~i   74 (144)
T KOG4549|consen    4 KPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCE---------CGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQI   74 (144)
T ss_pred             CCceeEEeccceeeeEEEEecccccccccccC---------cccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHH
Confidence            45688999999987775444333223332110         1123344566688889999998 68999999988 5789


Q ss_pred             HHHHHHHhcC
Q psy17244        109 GAAVADKLDA  118 (196)
Q Consensus       109 a~~vl~~ldp  118 (196)
                      |.+.++.+..
T Consensus        75 A~q~L~~fkv   84 (144)
T KOG4549|consen   75 ASQGLETFKV   84 (144)
T ss_pred             HHHHHHHhcc
Confidence            9999998864

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=84.83  E-value=3  Score=34.25  Aligned_cols=57  Identities=14%  Similarity=0.121  Sum_probs=39.4

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      -.+.+.+||||||+......      .|                          +...+.++. ..|+|+.-||-+..=.
T Consensus         6 ~~~lIFtDlD~TLl~~~ye~------~p--------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~   53 (274)
T COG3769           6 MPLLIFTDLDGTLLPHSYEW------QP--------------------------AAPVLLELKDAGVPVILCSSKTRAEM   53 (274)
T ss_pred             cceEEEEcccCcccCCCCCC------Cc--------------------------cchHHHHHHHcCCeEEEeccchHHHH
Confidence            34567779999999833211      01                          224566666 7899999999888777


Q ss_pred             HHHHHHhcCC
Q psy17244        110 AAVADKLDAR  119 (196)
Q Consensus       110 ~~vl~~ldp~  119 (196)
                      ...-+.|+..
T Consensus        54 ~~l~~~l~v~   63 (274)
T COG3769          54 LYLQKSLGVQ   63 (274)
T ss_pred             HHHHHhcCCC
Confidence            7777777765

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=84.44  E-value=1.7  Score=42.32  Aligned_cols=60  Identities=13%  Similarity=0.046  Sum_probs=40.6

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh--hCceEEEEcCCch
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS--QWYELVVFTASME  106 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~--~~yei~I~T~~~~  106 (196)
                      ..++..++||+||||+......                            ...-|++.+.|+.|+  +...++|-|.-+.
T Consensus       593 ~~~~rlI~LDyDGTLlp~~~~~----------------------------~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~  644 (854)
T PLN02205        593 RTTTRAILLDYDGTLMPQASID----------------------------KSPSSKSIDILNTLCRDKNNMVFIVSARSR  644 (854)
T ss_pred             hhcCeEEEEecCCcccCCcccc----------------------------CCCCHHHHHHHHHHHhcCCCEEEEEeCCCH
Confidence            3467889999999999543110                            223367777788774  4577777777777


Q ss_pred             hhHHHHHHHh
Q psy17244        107 IYGAAVADKL  116 (196)
Q Consensus       107 ~ya~~vl~~l  116 (196)
                      .-.+.++.-+
T Consensus       645 ~~L~~~f~~~  654 (854)
T PLN02205        645 KTLADWFSPC  654 (854)
T ss_pred             HHHHHHhCCC
Confidence            7777766544

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=84.37  E-value=2.6  Score=32.55  Aligned_cols=62  Identities=19%  Similarity=0.236  Sum_probs=40.4

Q ss_pred             EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244         35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA  113 (196)
Q Consensus        35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl  113 (196)
                      +|.|+|||+-.|--...             .+.+ +..      =+.+||+-++...++ +.|.++=-|+-.-..|...-
T Consensus         2 VvsDIDGTiT~SD~~G~-------------i~~~-~G~------d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr   61 (157)
T PF08235_consen    2 VVSDIDGTITKSDVLGH-------------ILPI-LGK------DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTR   61 (157)
T ss_pred             EEEeccCCcCccchhhh-------------hhhc-cCc------hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHH
Confidence            78899999998842111             0000 011      167999999999998 67888777777655555444


Q ss_pred             HHh
Q psy17244        114 DKL  116 (196)
Q Consensus       114 ~~l  116 (196)
                      +.|
T Consensus        62 ~~L   64 (157)
T PF08235_consen   62 SWL   64 (157)
T ss_pred             HHH
Confidence            443

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=83.24  E-value=1.6  Score=35.35  Aligned_cols=51  Identities=16%  Similarity=0.032  Sum_probs=30.9

Q ss_pred             EEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCce--EEEEcCCchhhHHHH
Q psy17244         36 VLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYE--LVVFTASMEIYGAAV  112 (196)
Q Consensus        36 VLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~ye--i~I~T~~~~~ya~~v  112 (196)
                      .||.||||......+.                          ....-|++.+.|+.|++...  ++|-|.-+..-.+..
T Consensus         1 ~lDyDGTL~p~~~~p~--------------------------~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~   53 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPD--------------------------AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF   53 (235)
T ss_dssp             EEE-TTTSS---S-GG--------------------------G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred             CcccCCccCCCCCCcc--------------------------ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence            4899999997764321                          15667999999999997665  888888887774444

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=81.79  E-value=2.2  Score=32.68  Aligned_cols=47  Identities=11%  Similarity=0.143  Sum_probs=36.9

Q ss_pred             eCccHH----HHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEE
Q psy17244         81 KRPHVD----FFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRY  127 (196)
Q Consensus        81 ~RP~l~----eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l  127 (196)
                      .+|++.    ++++++. +.++++|-|++...+++.+++.++... .++...+
T Consensus        86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~  138 (192)
T PF12710_consen   86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL  138 (192)
T ss_dssp             HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred             cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence            356666    9999985 899999999999999999999887552 2444444

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=80.11  E-value=1.5  Score=36.14  Aligned_cols=55  Identities=18%  Similarity=0.135  Sum_probs=34.3

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHH-HhhhCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD-IVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~-~l~~~yei~I~T~~~~~ya~  110 (196)
                      +..|+.||||||+...                               -.-+.-+.++++ ......-+++-|..+..-+.
T Consensus         2 ~~ll~sDlD~Tl~~~~-------------------------------~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~   50 (247)
T PF05116_consen    2 PRLLASDLDGTLIDGD-------------------------------DEALARLEELLEQQARPEILFVYVTGRSLESVL   50 (247)
T ss_dssp             SEEEEEETBTTTBHCH-------------------------------HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHH
T ss_pred             CEEEEEECCCCCcCCC-------------------------------HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHH
Confidence            5689999999999111                               011344555666 23356777777777888888


Q ss_pred             HHHHHhc
Q psy17244        111 AVADKLD  117 (196)
Q Consensus       111 ~vl~~ld  117 (196)
                      .++....
T Consensus        51 ~~~~~~~   57 (247)
T PF05116_consen   51 RLLREYN   57 (247)
T ss_dssp             HHHHHCT
T ss_pred             HHHHhCC
Confidence            8887653

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
2hhl_A	195	Crystal Structure Of The Human Small Ctd Phosphatas		7e-26
3pgl_A	180	Crystal Structure Of Human Small C-Terminal Domain		2e-25
2ghq_A	181	Ctd-Specific Phosphatase Scp1 In Complex With Pepti		6e-25
1t9z_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		1e-24
1ta0_A	197	Three-Dimensional Structure Of A Rna-Polymerase Ii		2e-24
3l0y_A	184	Crystal Structure Of Scp1 Phosphatase D98a Mutant L		2e-24
3l0c_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		2e-24
3l0b_A	184	Crystal Structure Of Scp1 Phosphatase D206a Mutant		9e-24
2q5e_A	187	Crystal Structure Of Human Carboxy-Terminal Domain		1e-23
3qle_A	204	Structural Basis For The Function Of Tim50 In The M		4e-17
3ef0_A	372	The Structure Of Fcp1, An Essential Rna Polymerase		7e-04

>pdb|2HHL|A Chain A, Crystal Structure Of The Human Small Ctd Phosphatase 3 Isoform 1 Length = 195

Iteration: 1
 Score =  113 bits (282), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 32  RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDI 91
           +K +V+DLDETL+HS        + KP +  DF++ V ID    + +V KRPHVD FL  
Sbjct: 28  KKCVVIDLDETLVHS--------SFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQR 79
Query: 92  VSQWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLS 151
           + Q +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  +LS
Sbjct: 80  MGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELS 138
Query: 152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            + I+DNSP +Y   P+NA+P++SWF D +DT
Sbjct: 139 KVIIVDNSPASYIFHPENAVPVQSWFDDMTDT 170

>pdb|3PGL|A Chain A, Crystal Structure Of Human Small C-Terminal Domain Phosphatase 1 (Scp1) Bound To Rabeprazole Length = 180

Iteration: 1
 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+DLDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 16  CVVIDLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 67
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 68  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 126
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            ILDNSP +Y   PDNA+P+ SWF + SDT
Sbjct: 127 LILDNSPASYVFHPDNAVPVASWFDNMSDT 156

>pdb|2GHQ|A Chain A, Ctd-Specific Phosphatase Scp1 In Complex With Peptide C- Terminal Domain Of Rna Polymerase Ii Length = 181

Iteration: 1
 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 85/150 (56%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V++LDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 17  CVVINLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 68
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 69  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 127
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            ILDNSP +Y   PDNA+P+ SWF + SDT
Sbjct: 128 LILDNSPASYVFHPDNAVPVASWFDNMSDT 157

>pdb|1T9Z|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein Length = 197

Iteration: 1
 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+DLDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL    
Sbjct: 17  CVVIDLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRXG 68
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 69  ELFECVLFTASLAKYADPVADXLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 127
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            I DNSP +Y   PDNA+P+ SWF + SDT
Sbjct: 128 LIXDNSPASYVFHPDNAVPVASWFDNXSDT 157

>pdb|1TA0|A Chain A, Three-Dimensional Structure Of A Rna-Polymerase Ii Binding Protein With Associated Ligand Length = 197

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+ LDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 17  CVVIXLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 68
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 69  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 127
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            ILDNSP +Y   PDNA+P+ SWF + SDT
Sbjct: 128 LILDNSPASYVFHPDNAVPVASWFDNMSDT 157

>pdb|3L0Y|A Chain A, Crystal Structure Of Scp1 Phosphatase D98a Mutant Length = 184

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+DL ETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 20  CVVIDLAETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 71
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 72  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 130
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            ILDNSP +Y   PDNA+P+ SWF + SDT
Sbjct: 131 LILDNSPASYVFHPDNAVPVASWFDNMSDT 160

>pdb|3L0C|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant With Trap Inorganic Phosphate Length = 184

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+DLDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 20  CVVIDLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 71
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 72  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 130
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            IL NSP +Y   PDNA+P+ SWF + SDT
Sbjct: 131 LILANSPASYVFHPDNAVPVASWFDNMSDT 160

>pdb|3L0B|A Chain A, Crystal Structure Of Scp1 Phosphatase D206a Mutant Phosphory Intermediate Length = 184

Iteration: 1
 Score =  106 bits (264), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
Query: 34  VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS 93
            +V+ LDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL  + 
Sbjct: 20  CVVIXLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 71
Query: 94  QWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLSSI 153
           + +E V+FTAS+  Y   VAD LD            + C    G+Y KDLS +  DL  +
Sbjct: 72  ELFECVLFTASLAKYADPVADLLDKWGAFRARLFR-ESCVFHRGNYVKDLSRLGRDLRRV 130
Query: 154 FILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
            IL NSP +Y   PDNA+P+ SWF + SDT
Sbjct: 131 LILANSPASYVFHPDNAVPVASWFDNMSDT 160

>pdb|2Q5E|A Chain A, Crystal Structure Of Human Carboxy-Terminal Domain Rna Polymerase Ii Polypeptide A Small Phosphatase 2 Length = 187

Iteration: 1
 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 32  RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDI 91
           R  +V+DLDETL+HS        + KP    DF++ + I+    + +V KRP+VD FL  
Sbjct: 17  RICVVIDLDETLVHS--------SFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRR 68
Query: 92  VSQWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYTKDLSAISPDLS 151
           + + +E V+FTAS+  Y   V D LD            + C    G Y KDLS +  DL 
Sbjct: 69  MGELFECVLFTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLR 127
Query: 152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183
              ILDNSP +Y   P+NA+P++SWF D +DT
Sbjct: 128 KTLILDNSPASYIFHPENAVPVQSWFDDMADT 159

>pdb|3QLE|A Chain A, Structural Basis For The Function Of Tim50 In The Mitochondrial Presequence Translocase Length = 204

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 81  KRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDAXXXXXXXXXXXQHCTPELGSYT 140
           KRP  D+FL  +SQ+YE+V+F+++  +Y   +A+KLD            +HC  + G + 
Sbjct: 60  KRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHI 119
Query: 141 KDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSD 182
           KDLS ++ DLS + I+D  P +Y+  P+NAIP++ W  +  D
Sbjct: 120 KDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEADD 161

>pdb|3EF0|A Chain A, The Structure Of Fcp1, An Essential Rna Polymerase Ii Ctd Phosphatase Length = 372

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 26  RLSIVKRKVLVLDLDETLIHSHHDGITRPTVK-----PGTPP--------DFVLKVTIDR 72
           RL   KR  L++DLD+T+IH+  D    PTV      PG            F L+     
Sbjct: 12  RLRQEKRLSLIVDLDQTIIHATVD----PTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSG 67
Query: 73  HPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD 117
           +   +++  RP +  FL  +S+ YEL ++T   + Y   VA  +D
Sbjct: 68  YTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIID 112

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	4e-68
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	2e-67
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	4e-59
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	3e-44
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	2e-40
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	9e-31

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score =  205 bits (524), Expect = 4e-68
 Identities = 73/175 (41%), Positives = 103/175 (58%), Gaps = 9/175 (5%)

Query: 22  LSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHK 81
           L    +    +K +V+DLDETL+HS        + KP +  DF++ V ID    + +V K
Sbjct: 18  LPEVTVLDYGKKCVVIDLDETLVHS--------SFKPISNADFIVPVEIDGTIHQVYVLK 69

Query: 82  RPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTK 141
           RPHVD FL  + Q +E V+FTAS+  Y   VAD LD      R R +R+ C    G+Y K
Sbjct: 70  RPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVF-RARLFRESCVFHRGNYVK 128

Query: 142 DLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR 196
           DLS +  +LS + I+DNSP +Y   P+NA+P++SWF D +DT LL L+P  + L 
Sbjct: 129 DLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLS 183

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score =  203 bits (519), Expect = 2e-67
 Identities = 71/166 (42%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD 90
            +  +V++LDETL+HS        + KP    DF++ V ID    + +V KRPHVD FL 
Sbjct: 14  DKICVVINLDETLVHS--------SFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQ 65

Query: 91  IVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL 150
            + + +E V+FTAS+  Y   VAD LD      R R +R+ C    G+Y KDLS +  DL
Sbjct: 66  RMGELFECVLFTASLAKYADPVADLLDKWGAF-RARLFRESCVFHRGNYVKDLSRLGRDL 124

Query: 151 SSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDALR 196
             + ILDNSP +Y   PDNA+P+ SWF + SDT L  LLP  + L 
Sbjct: 125 RRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLS 170

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score =  182 bits (465), Expect = 4e-59
 Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 24/165 (14%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD 90
           +   LV+ L++ L+HS                         +H  R    KRP  D+FL 
Sbjct: 33  RPLTLVITLEDFLVHSEWS---------------------QKHGWR--TAKRPGADYFLG 69

Query: 91  IVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL 150
            +SQ+YE+V+F+++  +Y   +A+KLD     +    +++HC  + G + KDLS ++ DL
Sbjct: 70  YLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDL 129

Query: 151 SSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPVLDAL 195
           S + I+D  P +Y+  P+NAIP++ W  +  D  L+ L+P L+ L
Sbjct: 130 SKVIIIDTDPNSYKLQPENAIPMEPWNGEA-DDKLVRLIPFLEYL 173

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} Length = 372

 Score =  149 bits (378), Expect = 3e-44
 Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 19  LSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVK---------PGTPPDFVLKVT 69
           L   +  RL   KR  L++DLD+T+IH+  D      +                F L+  
Sbjct: 5   LESENVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEG 64

Query: 70  IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILR-RRYY 128
              +   +++  RP +  FL  +S+ YEL ++T   + Y   VA  +D    + + R   
Sbjct: 65  PSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLS 124

Query: 129 RQHCTPELGSYTKDLSAISP-DLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA 187
           R           K L  + P D S + ++D+    +  +  N I +  +        + +
Sbjct: 125 RDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWD-WNPNLIKVVPYEFFVGIGDINS 180

Query: 188 LLP 190
              
Sbjct: 181 NFL 183

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} Length = 442

 Score =  141 bits (355), Expect = 2e-40
 Identities = 40/193 (20%), Positives = 73/193 (37%), Gaps = 20/193 (10%)

Query: 19  LSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTV---------KPGTPPDFVLKVT 69
           L   +  RL   KR  L++ LD+T+IH+  D      +                F L+  
Sbjct: 13  LESENVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEG 72

Query: 70  IDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILR-RRYY 128
              +   +++  RP +  FL  +S+ YEL ++T   + Y   VA  +D    + + R   
Sbjct: 73  PSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLS 132

Query: 129 RQHCTPELGSYTKDLSAISP-DLSSIFILDNSPGAYRGFPDNAIPIKSW-----FSDPSD 182
           R           K L  + P D S + ++D+    +  +  N I +  +       D + 
Sbjct: 133 RDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWD-WNPNLIKVVPYEFFVGIGDINS 188

Query: 183 TALLALLPVLDAL 195
             L    P+ +  
Sbjct: 189 NFLAKSTPLPEQE 201

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score =  113 bits (283), Expect = 9e-31
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 41/183 (22%)

Query: 31  KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD 90
            +K+LVLD+D TL                                      RP++  FL 
Sbjct: 139 GKKLLVLDIDYTLFDHRSP----------------------AETGTEL--MRPYLHEFLT 174

Query: 91  IVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYY--------RQHCTPELGSYTKD 142
              + Y++V+++A+   +       L    +   +  +          H         K 
Sbjct: 175 SAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKP 234

Query: 143 LSAISP-----DLSSIFILDNSPGAYRGFPDNAIPIK----SWFSDPSDTALLALLPVLD 193
           L  I       + S+  + D+    +   P + + I+    +  +  +DT LL L   L 
Sbjct: 235 LGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLR 294

Query: 194 ALR 196
            + 
Sbjct: 295 KIA 297

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	100.0
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	100.0
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	100.0
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	100.0
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	100.0
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.15
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.11
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.08
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.99
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.97
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.95
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.84
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.82
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.76
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	98.76
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	98.74
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.72
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.72
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	98.7
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.69
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	98.69
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.69
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	98.68
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	98.67
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	98.66
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.65
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.65
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	98.65
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.65
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.65
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	98.63
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	98.62
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	98.61
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	98.61
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	98.6
2hsz_A	243	Novel predicted phosphatase; structural genomics,	98.59
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	98.58
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	98.53
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	98.49
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	98.47
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.45
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.44
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.43
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.43
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	98.43
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	98.41
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.4
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.39
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.38
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.38
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	98.36
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.31
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.3
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.27
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.25
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.21
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.21
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.19
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.11
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	98.09
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	98.09
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	98.09
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.04
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	97.99
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	97.98
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	97.96
2zg6_A	220	Putative uncharacterized protein ST2620, probable	97.95
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.92
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.91
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	97.91
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.86
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.85
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	97.82
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.78
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.77
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	97.77
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.76
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	97.76
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.75
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.74
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.73
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.66
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	97.66
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.57
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	97.51
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.48
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	97.46
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	97.43
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	97.43
1te2_A	226	Putative phosphatase; structural genomics, phospha	97.32
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	97.31
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.3
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	97.28
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.25
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	97.23
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	97.23
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.19
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.16
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.12
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.12
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	97.08
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	97.06
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.05
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	97.02
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	96.98
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	96.94
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	96.93
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	96.9
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	96.84
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	96.83
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	96.82
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	96.81
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	96.78
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	96.65
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	96.62
3dao_A	283	Putative phosphatse; structural genomics, joint ce	96.62
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.59
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	96.59
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.58
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	96.51
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.5
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	96.39
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.33
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	96.31
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	96.3
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	96.24
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	96.19
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.19
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	96.1
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	96.1
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	96.08
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	96.03
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	96.02
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	95.0
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.0
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	95.88
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	95.86
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	95.79
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	95.72
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	95.61
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	95.59
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	95.56
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	95.56
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	95.43
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.4
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.18
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	94.92
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	93.6
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	93.0
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	92.89
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	92.7
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	92.3
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	92.28
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	92.26
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	92.0
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	91.97
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	91.83
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	91.81
2zg6_A	220	Putative uncharacterized protein ST2620, probable	91.81
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	91.54
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	91.28
1te2_A	226	Putative phosphatase; structural genomics, phospha	91.26
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	91.24
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	91.21
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	91.13
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	91.05
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	90.97
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	90.8
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	90.61
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	90.6
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	90.32
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	90.11
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	89.87
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	89.86
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	89.57
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	89.44
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	89.2
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	89.14
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	88.96
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	88.73
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	88.62
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	88.49
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	87.22
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	84.3
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	83.85
4gxt_A	385	A conserved functionally unknown protein; structur	81.88

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=100.00  E-value=1.2e-43  Score=283.60  Aligned_cols=143  Identities=34%  Similarity=0.666  Sum_probs=133.0

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIY  108 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~y  108 (196)
                      ..+++||||||||||||+.+...                       .++++++|||+++||++|+++|||+|||++++.|
T Consensus        31 ~~~~~tLVLDLDeTLvh~~~~~~-----------------------~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~y   87 (204)
T 3qle_A           31 YQRPLTLVITLEDFLVHSEWSQK-----------------------HGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMY   87 (204)
T ss_dssp             -CCSEEEEEECBTTTEEEEEETT-----------------------TEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHH
T ss_pred             cCCCeEEEEeccccEEeeecccc-----------------------CceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHH
Confidence            46899999999999999986431                       2468999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhh
Q psy17244        109 GAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLAL  188 (196)
Q Consensus       109 a~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l  188 (196)
                      |++|++.|||.+++|+++++|++|....|.|.|||++||+++++||||||++.+|..||+|||+|.+|.|++ |++|++|
T Consensus        88 a~~vl~~LDp~~~~f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~~~-D~eL~~L  166 (204)
T 3qle_A           88 SDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEA-DDKLVRL  166 (204)
T ss_dssp             HHHHHHHTSTTCSSEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCSSC-CCHHHHH
T ss_pred             HHHHHHHhCCCCCeEEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeECCCC-ChhHHHH
Confidence            999999999987799999999999998999999999999999999999999999999999999999999875 6699999


Q ss_pred             HHHHhhc
Q psy17244        189 LPVLDAL  195 (196)
Q Consensus       189 ~~~L~~L  195 (196)
                      +|||+.|
T Consensus       167 ~~~L~~L  173 (204)
T 3qle_A          167 IPFLEYL  173 (204)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=100.00  E-value=2e-42  Score=271.98  Aligned_cols=159  Identities=43%  Similarity=0.714  Sum_probs=148.4

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIY  108 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~y  108 (196)
                      ..+|++||||||||||||.+.+        ....+|.+.+.+++....+++.+|||+++||+++++.|+++|||++.+.|
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~--------~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~   83 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKP--------VNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKY   83 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSC--------CSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred             cCCCeEEEECCCCCeECCcccC--------CCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHH
Confidence            4589999999999999998642        34568888888888778899999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhh
Q psy17244        109 GAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLAL  188 (196)
Q Consensus       109 a~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l  188 (196)
                      |+++++.+|+. ++|+.+++|++|...++.+.|+|+++|+++++||+|||++..|..+++|||+|.+|.++++|++|++|
T Consensus        84 a~~vl~~ld~~-~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~l  162 (181)
T 2ght_A           84 ADPVADLLDKW-GAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDL  162 (181)
T ss_dssp             HHHHHHHHCTT-CCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCSSCTTCCHHHHH
T ss_pred             HHHHHHHHCCC-CcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccccCCCChHHHHHH
Confidence            99999999998 59999999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC
Q psy17244        189 LPVLDALR  196 (196)
Q Consensus       189 ~~~L~~Lr  196 (196)
                      +|+|+.|+
T Consensus       163 ~~~L~~l~  170 (181)
T 2ght_A          163 LPFFEQLS  170 (181)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhC
Confidence            99999874

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=269.09  Aligned_cols=159  Identities=44%  Similarity=0.745  Sum_probs=148.5

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIY  108 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~y  108 (196)
                      ..+|++||||||||||||.+..        ....++.+.+.+++....+++.+|||+++||+++++.|+++|||++.+.|
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~--------~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~~   96 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKP--------ISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKY   96 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSC--------CTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHH
T ss_pred             cCCCeEEEEccccceEcccccC--------CCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHHH
Confidence            5689999999999999998643        33468888888888778899999999999999999889999999999999


Q ss_pred             HHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhh
Q psy17244        109 GAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLAL  188 (196)
Q Consensus       109 a~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l  188 (196)
                      |+++++.+|+. ++|+.+++|++|...++.|.|+|+++|+++++||+|||++..|..+++|||.|.+|.++++|++|++|
T Consensus        97 a~~vl~~ld~~-~~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~~D~eL~~L  175 (195)
T 2hhl_A           97 ADPVADLLDRW-GVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDL  175 (195)
T ss_dssp             HHHHHHHHCCS-SCEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCTTCCHHHHH
T ss_pred             HHHHHHHhCCc-ccEEEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCCChHHHHHH
Confidence            99999999998 58999999999998889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC
Q psy17244        189 LPVLDALR  196 (196)
Q Consensus       189 ~~~L~~Lr  196 (196)
                      +|||+.|+
T Consensus       176 ~~~L~~l~  183 (195)
T 2hhl_A          176 IPFFEGLS  183 (195)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999873

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=100.00  E-value=1.7e-39  Score=275.38  Aligned_cols=151  Identities=22%  Similarity=0.268  Sum_probs=131.6

Q ss_pred             CCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceE
Q psy17244         19 LSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYEL   98 (196)
Q Consensus        19 ~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei   98 (196)
                      ++++++++   .+|+||||||||||||+.+..                        ...++.+|||+++||++|+++|||
T Consensus       130 ~~~~~p~~---~~k~tLVLDLDeTLvh~~~~~------------------------~~~~~~~RP~l~eFL~~l~~~yei  182 (320)
T 3shq_A          130 IKELAPPR---EGKKLLVLDIDYTLFDHRSPA------------------------ETGTELMRPYLHEFLTSAYEDYDI  182 (320)
T ss_dssp             CCCSSCCC---TTCEEEEECCBTTTBCSSSCC------------------------SSHHHHBCTTHHHHHHHHHHHEEE
T ss_pred             CCcCCCCc---CCCcEEEEeccccEEcccccC------------------------CCcceEeCCCHHHHHHHHHhCCEE
Confidence            34444444   389999999999999997432                        123589999999999999999999


Q ss_pred             EEEcCCchhhHHHHHHHhcCCCce-eeEEEEecCCCCC------CC-Ccccccccc-----CCCCCcEEEEECCCccccC
Q psy17244         99 VVFTASMEIYGAAVADKLDARRHI-LRRRYYRQHCTPE------LG-SYTKDLSAI-----SPDLSSIFILDNSPGAYRG  165 (196)
Q Consensus        99 ~I~T~~~~~ya~~vl~~ldp~~~~-f~~~l~r~~c~~~------~~-~~~KdL~~l-----~~~~~~~iiIDD~~~~~~~  165 (196)
                      +||||+++.||++|++.|||.+.. ++++++|++|...      .| .++|||++|     |+++++||||||++.+|..
T Consensus       183 vIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~  262 (320)
T 3shq_A          183 VIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLM  262 (320)
T ss_dssp             EEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTT
T ss_pred             EEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhcc
Confidence            999999999999999999998654 7788999998632      24 689999999     9999999999999999999


Q ss_pred             CCCceEeeceecCC----CCChHHHhhHHHHhhcC
Q psy17244        166 FPDNAIPIKSWFSD----PSDTALLALLPVLDALR  196 (196)
Q Consensus       166 ~~~N~I~v~~f~~~----~~D~~L~~l~~~L~~Lr  196 (196)
                      ||+|||+|.+|.++    .+|++|+.|+|||+.|+
T Consensus       263 ~p~NgI~I~~~~~~~~~~~~D~eL~~L~~~L~~L~  297 (320)
T 3shq_A          263 NPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIA  297 (320)
T ss_dssp             SGGGEEECCCCCCHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             CcCceEEeCeEcCCCCCCCccHHHHHHHHHHHHHh
Confidence            99999999999986    78999999999999873

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.8e-36  Score=262.39  Aligned_cols=162  Identities=25%  Similarity=0.381  Sum_probs=131.1

Q ss_pred             cccccCCCCCeEEEEeCCCceeeeecCCCCCC-CCCCCC--------CCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh
Q psy17244         23 SRHRLSIVKRKVLVLDLDETLIHSHHDGITRP-TVKPGT--------PPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS   93 (196)
Q Consensus        23 ~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~-~~~~~~--------~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~   93 (196)
                      ..+|+...+|++||||||+|||||...+..++ ...|+.        ..+|.+.+.+++..+.++|++|||+++||++++
T Consensus        17 ~~~rll~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls   96 (442)
T 3ef1_A           17 NVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS   96 (442)
T ss_dssp             HHHHHHHTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT
T ss_pred             HHHHHHhcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh
Confidence            34567788999999999999999986532110 001111        134777666677788999999999999999999


Q ss_pred             hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE-ecCCCCCCCCcccccccc-CCCCCcEEEEECCCccccCCCCceE
Q psy17244         94 QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY-RQHCTPELGSYTKDLSAI-SPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus        94 ~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~-r~~c~~~~~~~~KdL~~l-~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++|||+|||++.+.||++|++.|||.+.+|++|++ |++|+   +.+.|||++| |+++++||||||++.+|..|| |+|
T Consensus        97 ~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg---~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~p-N~I  172 (442)
T 3ef1_A           97 ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLI  172 (442)
T ss_dssp             TTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEE
T ss_pred             CCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCC---CceeeehHHhcCCCcceEEEEECCHHHhCCCC-CEE
Confidence            99999999999999999999999999878998776 99995   3579999977 999999999999999999998 999


Q ss_pred             eeceec-----CCCCChHHHhh
Q psy17244        172 PIKSWF-----SDPSDTALLAL  188 (196)
Q Consensus       172 ~v~~f~-----~~~~D~~L~~l  188 (196)
                      +|.+|.     |+.+|..|...
T Consensus       173 ~I~~~~fF~~~gD~n~~~l~~~  194 (442)
T 3ef1_A          173 KVVPYEFFVGIGDINSNFLAKS  194 (442)
T ss_dssp             ECCCCCCSTTCCCSCC------
T ss_pred             EcCCccccCCCCcccccccccc
Confidence            999995     67777665543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6.2e-35  Score=251.88  Aligned_cols=151  Identities=26%  Similarity=0.407  Sum_probs=125.1

Q ss_pred             cccccCCCCCeEEEEeCCCceeeeecCCCCCC-CCCCC--------CCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh
Q psy17244         23 SRHRLSIVKRKVLVLDLDETLIHSHHDGITRP-TVKPG--------TPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS   93 (196)
Q Consensus        23 ~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~-~~~~~--------~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~   93 (196)
                      ..+|+...+|++||||||||||||...+..+. ...+.        ...+|.+.....+..+.++|++|||+++||++++
T Consensus         9 ~~~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~   88 (372)
T 3ef0_A            9 NVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS   88 (372)
T ss_dssp             HHHHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH
T ss_pred             HHHHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh
Confidence            34677788999999999999999975431100 00011        1224666655566778999999999999999999


Q ss_pred             hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEE-EecCCCCCCCCcccccccc-CCCCCcEEEEECCCccccCCCCceE
Q psy17244         94 QWYELVVFTASMEIYGAAVADKLDARRHILRRRY-YRQHCTPELGSYTKDLSAI-SPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus        94 ~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l-~r~~c~~~~~~~~KdL~~l-~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++|||+|||++++.||++|++.|||.+.+|++++ +|++|+   +.+.|||++| |+++++||||||++.+|..|| |+|
T Consensus        89 ~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g---~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~p-N~I  164 (372)
T 3ef0_A           89 ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSG---SLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLI  164 (372)
T ss_dssp             TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSS---CSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEE
T ss_pred             cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCC---CcceecHHHhcCCCCceEEEEeCCHHHcCCCC-cEe
Confidence            9999999999999999999999999977898665 499985   3579999988 999999999999999999998 999


Q ss_pred             eeceec
Q psy17244        172 PIKSWF  177 (196)
Q Consensus       172 ~v~~f~  177 (196)
                      +|.+|.
T Consensus       165 ~i~~~~  170 (372)
T 3ef0_A          165 KVVPYE  170 (372)
T ss_dssp             ECCCCC
T ss_pred             eeCCcc
Confidence            999996

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.15  E-value=3.8e-11  Score=92.91  Aligned_cols=154  Identities=15%  Similarity=0.050  Sum_probs=99.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc-hhh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM-EIY  108 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~-~~y  108 (196)
                      ..+.++|||||||+.................. .   + ...  ..-.+...||+.++|+.|. +.+.++|.|++. ..+
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~-~---~-~~~--~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~   98 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDG-T---V-RDR--RGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEG   98 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTS-C---E-ECT--TCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhccc-c---h-hhc--cCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHH
Confidence            35699999999997543211111000000000 0   0 000  0123678999999999998 579999999999 799


Q ss_pred             HHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHh-
Q psy17244        109 GAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA-  187 (196)
Q Consensus       109 a~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~-  187 (196)
                      ++.+++.++.. .+|+.+....  ......+.+-++.+|.+++++++|+|++.-.......|+.+..+.......++.+ 
T Consensus        99 ~~~~l~~~gl~-~~f~~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~  175 (187)
T 2wm8_A           99 ANQLLELFDLF-RYFVHREIYP--GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQG  175 (187)
T ss_dssp             HHHHHHHTTCT-TTEEEEEESS--SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCHHHHHHH
T ss_pred             HHHHHHHcCcH-hhcceeEEEe--CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCChHHHHHH
Confidence            99999999886 5787654321  1122345667788899999999999998776666677887766665444444443 


Q ss_pred             hHHHHhh
Q psy17244        188 LLPVLDA  194 (196)
Q Consensus       188 l~~~L~~  194 (196)
                      |..+.+.
T Consensus       176 l~~~~~~  182 (187)
T 2wm8_A          176 LETFAKA  182 (187)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            4444443

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.11  E-value=7.5e-11  Score=91.44  Aligned_cols=127  Identities=13%  Similarity=0.068  Sum_probs=90.6

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch---h
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME---I  107 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~---~  107 (196)
                      -++++||+||||+...............           .      .+...||+.++|+.|. +.+.++|.|++..   .
T Consensus         3 ik~vifD~DgtL~~~~~~~y~~~~~~~~-----------~------~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~   65 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRYDHHPLDTY-----------P------EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTE   65 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSSCSSCGGGC-----------T------TCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHH
T ss_pred             ceEEEEcCCCceeeccchhhhhHHHhcc-----------C------CceeCcCHHHHHHHHHHCCCEEEEEECCCccchH
Confidence            4689999999998743211000000000           0      1578999999999998 5799999999887   8


Q ss_pred             hHHHHHHHhcCCCceeeEEEEecCC----CCCC---CCccccccccCCCCCcEEEEECC-CccccCCCCceEeecee
Q psy17244        108 YGAAVADKLDARRHILRRRYYRQHC----TPEL---GSYTKDLSAISPDLSSIFILDNS-PGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       108 ya~~vl~~ldp~~~~f~~~l~r~~c----~~~~---~~~~KdL~~l~~~~~~~iiIDD~-~~~~~~~~~N~I~v~~f  176 (196)
                      .+..+++.++.. .+|+.+++.+..    ...+   ..+.+-++++|.+++++++|+|+ ..-.......|+...-+
T Consensus        66 ~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v  141 (189)
T 3ib6_A           66 VIKRVLTNFGII-DYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWL  141 (189)
T ss_dssp             HHHHHHHHTTCG-GGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEE
T ss_pred             HHHHHHHhcCch-hheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence            999999999987 689988887654    2222   25677788889999999999999 56554444445544433

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.08  E-value=7.3e-11  Score=92.15  Aligned_cols=93  Identities=13%  Similarity=0.155  Sum_probs=79.0

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ....||+.++|+.|. +.+.++|.|++....+..+++.++.. .+|+.+++.+.+...++   .|.+-++++|.+++++|
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~-~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l  161 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE-KYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVV  161 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEE
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC-ccccccccccccCCCcccHHHHHHHHHhhCCCccceE
Confidence            567899999999997 68999999999999999999999987 68999998887766544   67788999999999999


Q ss_pred             EEECCCccccCCCCceEe
Q psy17244        155 ILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~  172 (196)
                      +|+|++.-.......|+.
T Consensus       162 ~VgDs~~Di~aA~~aG~~  179 (216)
T 3kbb_A          162 VFEDSKSGVEAAKSAGIE  179 (216)
T ss_dssp             EEECSHHHHHHHHHTTCC
T ss_pred             EEecCHHHHHHHHHcCCc
Confidence            999998766555555553

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.99  E-value=3.3e-11  Score=87.43  Aligned_cols=112  Identities=14%  Similarity=0.130  Sum_probs=88.4

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++|+||||..+                                ....||+.++|+.|. +.+.++|.|++...++..
T Consensus         3 k~i~~D~DgtL~~~--------------------------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~   50 (137)
T 2pr7_A            3 RGLIVDYAGVLDGT--------------------------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAA   50 (137)
T ss_dssp             CEEEECSTTTTSSC--------------------------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGH
T ss_pred             cEEEEeccceecCC--------------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence            58999999999322                                345799999999998 469999999999999999


Q ss_pred             HHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEEEECCCccccCCCCceEeeceec
Q psy17244        112 VADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       112 vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +++.++.. .+|+.+++.+.+...+.   .+.+-++.+|.+++++++|+|++.........|+....+.
T Consensus        51 ~l~~~~l~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~  118 (137)
T 2pr7_A           51 PIRELETN-GVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQ  118 (137)
T ss_dssp             HHHHHHHT-TSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             HHHHCChH-hhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeC
Confidence            99998776 57888887765544333   4666778889999999999999987665666676554443

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.97  E-value=5.8e-10  Score=87.59  Aligned_cols=98  Identities=8%  Similarity=-0.010  Sum_probs=79.4

Q ss_pred             EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCC-c
Q psy17244         78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLS-S  152 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~-~  152 (196)
                      .....|++.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.+++ +
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~  179 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT-HYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKE  179 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTT
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch-hheeeEEcccccCCCCCChHHHHHHHHHcCCCcccC
Confidence            36789999999999985 6999999999999999999999876 58888888877665443   56677888899998 9


Q ss_pred             EEEEECCCccccCCCCceEeecee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++.|+|++.-.......|+.+..+
T Consensus       180 ~v~vGD~~~Di~~a~~aG~~~v~~  203 (231)
T 3kzx_A          180 VFFIGDSISDIQSAIEAGCLPIKY  203 (231)
T ss_dssp             EEEEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEEEcCCHHHHHHHHHCCCeEEEE
Confidence            999999997665555555544444

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.95  E-value=1e-09  Score=84.47  Aligned_cols=129  Identities=14%  Similarity=0.079  Sum_probs=88.9

Q ss_pred             CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC--
Q psy17244         28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS--  104 (196)
Q Consensus        28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~--  104 (196)
                      ...+.++++||+||||+.......     ....               .-.+.+.||+.++|+.|. +.+.++|.|++  
T Consensus        10 ~~~~~k~~~~D~Dgtl~~~~~~~~-----~~~~---------------~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~   69 (176)
T 2fpr_A           10 HGSSQKYLFIDRDGTLISEPPSDF-----QVDR---------------FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDG   69 (176)
T ss_dssp             ---CCEEEEECSBTTTBCCC--CC-----CCCS---------------GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTT
T ss_pred             cCCcCcEEEEeCCCCeEcCCCCCc-----CcCC---------------HHHCcCCccHHHHHHHHHHCCCEEEEEECCcc
Confidence            346789999999999997742100     0000               001567899999999998 57999999999  


Q ss_pred             -------------chhhHHHHHHHhcCCCceeeEEEEe-----cCCCCC---CCCccccccccCCCCCcEEEEECCCccc
Q psy17244        105 -------------MEIYGAAVADKLDARRHILRRRYYR-----QHCTPE---LGSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       105 -------------~~~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~---~~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                                   ...+++.+++.++..   |..+++.     +.+...   ...+.+-++.+|.+++++++|+|++.-.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di  146 (176)
T 2fpr_A           70 LGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDI  146 (176)
T ss_dssp             TTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHH
T ss_pred             ccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence                         678899999988764   7777654     454443   3367777888999999999999999766


Q ss_pred             cCCCCceEeeceecCC
Q psy17244        164 RGFPDNAIPIKSWFSD  179 (196)
Q Consensus       164 ~~~~~N~I~v~~f~~~  179 (196)
                      ......|+...-+...
T Consensus       147 ~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          147 QLAENMGINGLRYDRE  162 (176)
T ss_dssp             HHHHHHTSEEEECBTT
T ss_pred             HHHHHcCCeEEEEcCC
Confidence            6666677776555543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.84  E-value=1.7e-09  Score=82.41  Aligned_cols=119  Identities=12%  Similarity=0.068  Sum_probs=83.8

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-----
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME-----  106 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~-----  106 (196)
                      +.++||+||||+.....-.       ...               -.+...||+.++|+.|. +.+.++|.|+++.     
T Consensus         2 k~v~~D~DGtL~~~~~~~~-------~~~---------------~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~   59 (179)
T 3l8h_A            2 KLIILDRDGVVNQDSDAFV-------KSP---------------DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGL   59 (179)
T ss_dssp             CEEEECSBTTTBCCCTTCC-------CSG---------------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTS
T ss_pred             CEEEEcCCCccccCCCccC-------CCH---------------HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCc
Confidence            5799999999997642100       000               01567899999999998 5799999999987     


Q ss_pred             ----------hhHHHHHHHhcCCCceeeEEEEe-----cCCCCCC---CCccccccccCCCCCcEEEEECCCccccCCCC
Q psy17244        107 ----------IYGAAVADKLDARRHILRRRYYR-----QHCTPEL---GSYTKDLSAISPDLSSIFILDNSPGAYRGFPD  168 (196)
Q Consensus       107 ----------~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~  168 (196)
                                .++..+++.++   .+|...++.     +.|...+   ..+.+-++++|.+++++++|+|+..-......
T Consensus        60 ~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~  136 (179)
T 3l8h_A           60 FDTATLNAIHDKMHRALAQMG---GVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQ  136 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTT---CCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhCC---CceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence                      67777777776   345555543     3333332   25667788889999999999999976655555


Q ss_pred             ceEeecee
Q psy17244        169 NAIPIKSW  176 (196)
Q Consensus       169 N~I~v~~f  176 (196)
                      .|+....+
T Consensus       137 aG~~~i~v  144 (179)
T 3l8h_A          137 AGCAPWLV  144 (179)
T ss_dssp             HTCEEEEE
T ss_pred             CCCcEEEE
Confidence            66544433

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.76  E-value=4e-09  Score=82.29  Aligned_cols=96  Identities=8%  Similarity=-0.023  Sum_probs=76.5

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...|++.++|+.+.+ .+.++|.|++....+..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  173 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT-NSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL  173 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG-GGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh-hhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence            5678999999999985 5999999999999999999998876 57888888877665443   56677888899999999


Q ss_pred             EEECCCccccCCCCceEeece
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~  175 (196)
                      .|+|+..-.......|+.+..
T Consensus       174 ~iGD~~~Di~~a~~aG~~~~~  194 (230)
T 3um9_A          174 FVSCNSWDATGAKYFGYPVCW  194 (230)
T ss_dssp             EEESCHHHHHHHHHHTCCEEE
T ss_pred             EEeCCHHHHHHHHHCCCEEEE
Confidence            999998655444444444443

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=98.76  E-value=3.8e-09  Score=83.03  Aligned_cols=97  Identities=11%  Similarity=-0.057  Sum_probs=78.2

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ....||+.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++++|.++++++
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i  181 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD-TRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCV  181 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG-GTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch-hheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            4578999999999985 6999999999999999999999876 57888888776654433   56677888999999999


Q ss_pred             EEECCCccccCCCCceEeecee
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      .|+|++.-.......|+.+..+
T Consensus       182 ~vGD~~~Di~~a~~aG~~~i~v  203 (237)
T 4ex6_A          182 VIGDGVPDAEMGRAAGMTVIGV  203 (237)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEE
T ss_pred             EEcCCHHHHHHHHHCCCeEEEE
Confidence            9999997665555566644443

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=98.74  E-value=5.6e-09  Score=80.52  Aligned_cols=93  Identities=9%  Similarity=0.053  Sum_probs=71.9

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.+ |+.+.+.+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++.+|  ++++++
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~  148 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLL-RYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL  148 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcH-HhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence            467899999 9999733999999999999999999998876 57888888776655443   4556677778  899999


Q ss_pred             EECCCccccCCCCceEeece
Q psy17244        156 LDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~  175 (196)
                      |+|++.-.......|+.+..
T Consensus       149 vGD~~~Di~~a~~aG~~~~~  168 (201)
T 2w43_A          149 VSSNAFDVIGAKNAGMRSIF  168 (201)
T ss_dssp             EESCHHHHHHHHHTTCEEEE
T ss_pred             EeCCHHHhHHHHHCCCEEEE
Confidence            99999755444445554433

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.72  E-value=1.2e-08  Score=78.97  Aligned_cols=95  Identities=8%  Similarity=0.077  Sum_probs=75.0

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecC-----------CCCC--CCCcccccc
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH-----------CTPE--LGSYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~-----------c~~~--~~~~~KdL~  144 (196)
                      +..+||+.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|..++..+.           |...  ...+.+-++
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~  152 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD-AAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQR  152 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc-hhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHH
Confidence            5689999999999984 6999999999999999999999887 57887764433           1111  114556677


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      .+|.++++++.|+|++.-.......|+.+.
T Consensus       153 ~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~  182 (217)
T 3m1y_A          153 LLNISKTNTLVVGDGANDLSMFKHAHIKIA  182 (217)
T ss_dssp             HHTCCSTTEEEEECSGGGHHHHTTCSEEEE
T ss_pred             HcCCCHhHEEEEeCCHHHHHHHHHCCCeEE
Confidence            889999999999999987766666777664

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.72  E-value=2.2e-08  Score=77.32  Aligned_cols=93  Identities=10%  Similarity=0.003  Sum_probs=72.9

Q ss_pred             EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee--eEEEEecCCCCCCC---CccccccccCCCC
Q psy17244         77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL--RRRYYRQHCTPELG---SYTKDLSAISPDL  150 (196)
Q Consensus        77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f--~~~l~r~~c~~~~~---~~~KdL~~l~~~~  150 (196)
                      ......||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|  ..+++.+. ...++   .+.+-++.+|.++
T Consensus        67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~~~  144 (205)
T 3m9l_A           67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLA-DCFAEADVLGRDE-APPKPHPGGLLKLAEAWDVSP  144 (205)
T ss_dssp             EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTCCG
T ss_pred             hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch-hhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCCCH
Confidence            45788999999999998 56999999999999999999999876 577  66666554 22221   5567778889999


Q ss_pred             CcEEEEECCCccccCCCCceE
Q psy17244        151 SSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++++.|+|+..-.......|+
T Consensus       145 ~~~i~iGD~~~Di~~a~~aG~  165 (205)
T 3m9l_A          145 SRMVMVGDYRFDLDCGRAAGT  165 (205)
T ss_dssp             GGEEEEESSHHHHHHHHHHTC
T ss_pred             HHEEEECCCHHHHHHHHHcCC
Confidence            999999999975544444444

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=98.70  E-value=4.8e-09  Score=80.36  Aligned_cols=98  Identities=11%  Similarity=0.017  Sum_probs=78.3

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...|++.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  166 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ-GFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRAL  166 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH-hheeeEeecccccCCCCChHHHHHHHHHcCCChHHeE
Confidence            4679999999999984 6999999999999999999999876 58888888876655432   55677888899999999


Q ss_pred             EEECCCccccCCCCceEeeceec
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      .|+|++.-.......|+.+..+.
T Consensus       167 ~iGD~~~Di~~a~~aG~~~~~~~  189 (214)
T 3e58_A          167 IIEDSEKGIAAGVAADVEVWAIR  189 (214)
T ss_dssp             EEECSHHHHHHHHHTTCEEEEEC
T ss_pred             EEeccHhhHHHHHHCCCEEEEEC
Confidence            99999875555555555444444

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.69  E-value=1.1e-08  Score=76.89  Aligned_cols=114  Identities=13%  Similarity=0.041  Sum_probs=81.5

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.++||+||||+.+...-.      .               .....-...|+..++|+.|. +.+.++|.|++....+.
T Consensus         9 ~k~v~~DlDGTL~~~~~~~~------~---------------~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~   67 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYYT------E---------------HGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLI   67 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEEE------T---------------TEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHH
T ss_pred             eeEEEEecCcceECCceeec------C---------------CCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHH
Confidence            46899999999997642100      0               01223455789999999998 57999999999999999


Q ss_pred             HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .+++.++.. .+|..      .......+.+-++.++.+++++++|+|++.-.......|+.+
T Consensus        68 ~~l~~~gl~-~~~~~------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~  123 (162)
T 2p9j_A           68 TRLKELGVE-EIYTG------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPV  123 (162)
T ss_dssp             HHHHHTTCC-EEEEC------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHcCCH-hhccC------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence            999999876 45532      122222445567778899999999999997655444555543

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=98.69  E-value=3.8e-09  Score=84.67  Aligned_cols=95  Identities=6%  Similarity=0.026  Sum_probs=76.6

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ...||+.++|+.|. +.+.++|.|++.  .+..+++.++.. .+|+.+++.+.....++   .|.+-++++|.+++++|+
T Consensus        95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  171 (243)
T 4g9b_A           95 AVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELR-EFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIG  171 (243)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCG-GGCSEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEEE
T ss_pred             cccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhc-cccccccccccccCCCCcHHHHHHHHHHcCCChHHEEE
Confidence            46899999999997 689999999864  477889999887 68998888877665543   678899999999999999


Q ss_pred             EECCCccccCCCCceEeeceec
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      |+|++.-.......|+.+....
T Consensus       172 VgDs~~di~aA~~aG~~~I~V~  193 (243)
T 4g9b_A          172 IEDAQAGIDAINASGMRSVGIG  193 (243)
T ss_dssp             EESSHHHHHHHHHHTCEEEEES
T ss_pred             EcCCHHHHHHHHHcCCEEEEEC
Confidence            9999976666666666655544

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.69  E-value=8.2e-09  Score=80.94  Aligned_cols=94  Identities=14%  Similarity=0.035  Sum_probs=74.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  172 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR-DGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  172 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH-hhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            467899999999998 57999999999999999999998876 57888888776655443   45667788899999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|+|+..-.......|+.+
T Consensus       173 ~iGD~~~Di~~a~~aG~~~  191 (232)
T 1zrn_A          173 FVASNAWDATGARYFGFPT  191 (232)
T ss_dssp             EEESCHHHHHHHHHHTCCE
T ss_pred             EEeCCHHHHHHHHHcCCEE
Confidence            9999985443333344433

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=98.68  E-value=1.4e-08  Score=79.06  Aligned_cols=97  Identities=8%  Similarity=0.058  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|+.+++.+.....++   .+.+-++.+|.++++++
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i  163 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLA-FYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI  163 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCH-hheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence            467899999999998 56999999999999999999999876 68888888877655433   55677888899999999


Q ss_pred             EEECCCccccCCCCceEeecee
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      .|+|+..-.......|+.+..+
T Consensus       164 ~iGD~~~Di~~a~~aG~~~i~v  185 (226)
T 3mc1_A          164 MIGDREYDVIGALKNNLPSIGV  185 (226)
T ss_dssp             EEESSHHHHHHHHTTTCCEEEE
T ss_pred             EECCCHHHHHHHHHCCCCEEEE
Confidence            9999997666555666644433

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=98.67  E-value=1.4e-08  Score=80.40  Aligned_cols=97  Identities=11%  Similarity=-0.006  Sum_probs=76.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee--eEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL--RRRYYRQHCTPELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f--~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~  152 (196)
                      ....||+.++|+.+. +.+.++|.|++....+...++. +.. .+|  +.+++.+.+...++   .+.+-++++|.++++
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  185 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP-GMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE  185 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST-TTCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH-HhcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence            567899999999998 5699999999999999998888 665 578  77887776554433   567788889999999


Q ss_pred             EEEEECCCccccCCCCceEeeceec
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      ++.|+|++.-.......|+.+..+.
T Consensus       186 ~i~vGD~~~Di~~a~~aG~~~i~v~  210 (243)
T 3qxg_A          186 AVVIENAPLGVEAGHKAGIFTIAVN  210 (243)
T ss_dssp             EEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred             eEEEeCCHHHHHHHHHCCCEEEEEe
Confidence            9999999976655555665444433

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=98.66  E-value=5.1e-09  Score=84.17  Aligned_cols=95  Identities=8%  Similarity=0.024  Sum_probs=74.8

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ...||+.++|+.|. +.+.+++-|++  ..+..+++.++.. .+|+.+++.+.+...++   .|.+-++++|.+++++|+
T Consensus       116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~-~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~  192 (250)
T 4gib_A          116 DILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGIS-DKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIG  192 (250)
T ss_dssp             GSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCG-GGCSEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred             ccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccc-cccceeecccccCCCCCcHHHHHHHHHHhCCChHHeEE
Confidence            46799999999998 56777765443  5678899999887 68999988887766544   678889999999999999


Q ss_pred             EECCCccccCCCCceEeeceec
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      |+|++.-.......|+.+..+.
T Consensus       193 VGDs~~Di~aA~~aG~~~i~v~  214 (250)
T 4gib_A          193 IEDASAGIDAINSANMFSVGVG  214 (250)
T ss_dssp             EESSHHHHHHHHHTTCEEEEES
T ss_pred             ECCCHHHHHHHHHcCCEEEEEC
Confidence            9999976666666676655543

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.65  E-value=5.1e-09  Score=82.02  Aligned_cols=122  Identities=11%  Similarity=0.014  Sum_probs=82.3

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +.+.++||+||||++-....         ....+.         ....+...||+.++|+.|. +.+.++|-|+.....+
T Consensus         5 ~~kav~fDlDGTL~d~~~~~---------~~~~~~---------~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~   66 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQA---------ATSDTP---------DDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALS   66 (196)
T ss_dssp             CCSCEEEETBTTTBCTTSTT---------TSCSSC---------CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHH
T ss_pred             cCCEEEEcCCCceEeccccc---------cchhhc---------ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHH
Confidence            45689999999998721110         000000         0011456799999999997 6899999999988887


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCC-CcEEEEECCCccccCCCCceEeecee
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDL-SSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~-~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ..++.      .+|+.+++.+.+...+.   .+.+-++++|.++ +++++|.|++.-.......|+.+..+
T Consensus        67 ~~~~~------~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v  131 (196)
T 2oda_A           67 TPLAA------PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGL  131 (196)
T ss_dssp             HHHHT------TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEE
T ss_pred             HHhcC------ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEE
Confidence            55443      24666666666554432   5677788889865 89999999997665555566655443

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.65  E-value=1.6e-08  Score=79.07  Aligned_cols=96  Identities=7%  Similarity=-0.058  Sum_probs=77.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...|++.++|+.+. +.+.++|.|++....+..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~  176 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS-GLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQIL  176 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT-TTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEE
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH-hhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEE
Confidence            567899999999998 46999999999999999999998876 57888888877665544   46777888999999999


Q ss_pred             EEECCCccccCCCCceEeece
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~  175 (196)
                      .|+|+..-.......|+.+..
T Consensus       177 ~vGD~~~Di~~a~~~G~~~~~  197 (233)
T 3umb_A          177 FVSSNGWDACGATWHGFTTFW  197 (233)
T ss_dssp             EEESCHHHHHHHHHHTCEEEE
T ss_pred             EEeCCHHHHHHHHHcCCEEEE
Confidence            999998655444444554443

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=98.65  E-value=3.6e-08  Score=80.05  Aligned_cols=92  Identities=11%  Similarity=0.069  Sum_probs=73.9

Q ss_pred             EeeCccHHHHHHHhhh-Cc--eEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC----C---CCccccccccCC
Q psy17244         79 VHKRPHVDFFLDIVSQ-WY--ELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE----L---GSYTKDLSAISP  148 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~y--ei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~----~---~~~~KdL~~l~~  148 (196)
                      +...||+.++|+.+.+ .+  .++|.|++...++..+++.++.. .+|+.+++.+.+...    +   ..+.+-++.+|.
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi  219 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA-DLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGL  219 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT-TSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc-cccceEEEeccCCCcccCCCcCHHHHHHHHHHcCC
Confidence            5678999999999984 78  99999999999999999999887 588888876554321    2   245677888899


Q ss_pred             CC-CcEEEEECCCccccCCCCceE
Q psy17244        149 DL-SSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       149 ~~-~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++ +++++|+|++.-.......|+
T Consensus       220 ~~~~~~i~vGD~~~Di~~a~~aG~  243 (282)
T 3nuq_A          220 ARYENAYFIDDSGKNIETGIKLGM  243 (282)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTC
T ss_pred             CCcccEEEEcCCHHHHHHHHHCCC
Confidence            98 999999999976655555555

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.65  E-value=2.7e-08  Score=78.59  Aligned_cols=91  Identities=8%  Similarity=0.032  Sum_probs=72.6

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  182 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD-RVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVC  182 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH-HHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            356799999999998 57999999999999999999998876 57888888776655443   45667788899999999


Q ss_pred             EEECCCccccCCCCce
Q psy17244        155 ILDNSPGAYRGFPDNA  170 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~  170 (196)
                      .|+|+..-.......|
T Consensus       183 ~iGD~~~Di~~a~~aG  198 (240)
T 2no4_A          183 FVSSNAWDLGGAGKFG  198 (240)
T ss_dssp             EEESCHHHHHHHHHHT
T ss_pred             EEeCCHHHHHHHHHCC
Confidence            9999985443333334

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.65  E-value=4e-08  Score=77.31  Aligned_cols=117  Identities=15%  Similarity=0.072  Sum_probs=81.9

Q ss_pred             CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc--
Q psy17244         29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM--  105 (196)
Q Consensus        29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~--  105 (196)
                      ..+.+.++||+||||+.......       ..                ..+...||+.++|++|. +.+.++|.|++.  
T Consensus        22 ~~~~k~v~~D~DGTL~~~~~~~~-------~~----------------~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~   78 (211)
T 2gmw_A           22 AKSVPAIFLDRDGTINVDHGYVH-------EI----------------DNFEFIDGVIDAMRELKKMGFALVVVTNQSGI   78 (211)
T ss_dssp             --CBCEEEECSBTTTBCCCSSCC-------SG----------------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHH
T ss_pred             hhcCCEEEEcCCCCeECCCCccc-------Cc----------------ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCc
Confidence            34567899999999997541100       00                01456899999999998 579999999999  


Q ss_pred             -------------hhhHHHHHHHhcCCCceeeEEEEec------------CCCCCC---CCccccccccCCCCCcEEEEE
Q psy17244        106 -------------EIYGAAVADKLDARRHILRRRYYRQ------------HCTPEL---GSYTKDLSAISPDLSSIFILD  157 (196)
Q Consensus       106 -------------~~ya~~vl~~ldp~~~~f~~~l~r~------------~c~~~~---~~~~KdL~~l~~~~~~~iiID  157 (196)
                                   ..++..+++.++..   |..+++..            .+...+   ..+.+-++.+|.+++++++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VG  155 (211)
T 2gmw_A           79 ARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVG  155 (211)
T ss_dssp             HHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEE
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEc
Confidence                         48889999888764   55554331            232222   245666788899999999999


Q ss_pred             CCCccccCCCCceE
Q psy17244        158 NSPGAYRGFPDNAI  171 (196)
Q Consensus       158 D~~~~~~~~~~N~I  171 (196)
                      |+..-.......|+
T Consensus       156 D~~~Di~~a~~aG~  169 (211)
T 2gmw_A          156 DKLEDMQAAVAANV  169 (211)
T ss_dssp             SSHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHCCC
Confidence            99976554444554

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=98.63  E-value=2.2e-08  Score=79.03  Aligned_cols=98  Identities=8%  Similarity=0.026  Sum_probs=79.1

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCC-CCcE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPD-LSSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~-~~~~  153 (196)
                      ....||+.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.+ ++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~  187 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID-RYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKV  187 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGE
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH-hhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcE
Confidence            5689999999999985 6999999999999999999999886 58888888887765543   456677888999 9999


Q ss_pred             EEEECCCccccCCCCceEeeceec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +.|+|++.-.......|+.+..+.
T Consensus       188 i~vGD~~~Di~~a~~aG~~~i~v~  211 (240)
T 3sd7_A          188 IMVGDRKYDIIGAKKIGIDSIGVL  211 (240)
T ss_dssp             EEEESSHHHHHHHHHHTCEEEEES
T ss_pred             EEECCCHHHHHHHHHCCCCEEEEe
Confidence            999999976655555566444433

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=98.62  E-value=6.9e-08  Score=75.84  Aligned_cols=93  Identities=11%  Similarity=0.148  Sum_probs=73.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  160 (222)
T 2nyv_A           82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS-GYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKAL  160 (222)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH-HHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEE
Confidence            678999999999998 46999999999999999999999876 57888887766544332   45566788899999999


Q ss_pred             EEECCCccccCCCCceEe
Q psy17244        155 ILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~  172 (196)
                      +|+|+..-.......|+.
T Consensus       161 ~vGD~~~Di~~a~~aG~~  178 (222)
T 2nyv_A          161 IVGDTDADIEAGKRAGTK  178 (222)
T ss_dssp             EEESSHHHHHHHHHHTCE
T ss_pred             EECCCHHHHHHHHHCCCe
Confidence            999997655433334443

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=98.61  E-value=3.5e-09  Score=81.48  Aligned_cols=100  Identities=18%  Similarity=0.141  Sum_probs=78.0

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHH-hcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADK-LDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~-ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~  152 (196)
                      .+...||+.++|+.+. +.+.++|.|++...+++.++.. ++.. .+|+.+++.+.+...++   .+.+-++.+|.++++
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (206)
T 2b0c_A           89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  167 (206)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hheeeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            3678999999999998 6899999999998887776665 4443 46777887766554443   456677888999999


Q ss_pred             EEEEECCCccccCCCCceEeeceecC
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +++|+|++.-.......|+.+..+..
T Consensus       168 ~~~vgD~~~Di~~a~~aG~~~~~~~~  193 (206)
T 2b0c_A          168 TVFFDDNADNIEGANQLGITSILVKD  193 (206)
T ss_dssp             EEEEESCHHHHHHHHTTTCEEEECCS
T ss_pred             eEEeCCCHHHHHHHHHcCCeEEEecC
Confidence            99999999877666677877666654

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=98.61  E-value=2.8e-08  Score=78.24  Aligned_cols=96  Identities=11%  Similarity=-0.014  Sum_probs=72.6

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee--eEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL--RRRYYRQHCTPELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f--~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~  152 (196)
                      ....||+.++|+.+. +.+.++|.|++...++...++. +.. .+|  +.+++.+.+...++   .+.+-++.+|.++++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~-~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~  184 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP-GIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE  184 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST-TTCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH-HhcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence            567899999999998 5699999999999999999988 665 578  77887776654433   466778889999999


Q ss_pred             EEEEECCCccccCCCCceEeecee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++.|+|+..-.......|+.+..+
T Consensus       185 ~i~vGD~~~Di~~a~~aG~~~i~v  208 (247)
T 3dv9_A          185 ALVIENAPLGVQAGVAAGIFTIAV  208 (247)
T ss_dssp             EEEEECSHHHHHHHHHTTSEEEEE
T ss_pred             eEEEeCCHHHHHHHHHCCCeEEEE
Confidence            999999997665555556544333

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=98.60  E-value=2.6e-08  Score=77.64  Aligned_cols=95  Identities=6%  Similarity=-0.065  Sum_probs=76.5

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...|++.++|+.+. ..+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i  168 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD-INKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECL  168 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC-TTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh-hhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEE
Confidence            577899999999998 46999999999999999999998876 57888887776654432   56677888999999999


Q ss_pred             EEECCCccccCCCCceEeec
Q psy17244        155 ILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~  174 (196)
                      .|+|+..-.......|+.+.
T Consensus       169 ~iGD~~~Di~~a~~aG~~~i  188 (233)
T 3s6j_A          169 VIGDAIWDMLAARRCKATGV  188 (233)
T ss_dssp             EEESSHHHHHHHHHTTCEEE
T ss_pred             EEeCCHHhHHHHHHCCCEEE
Confidence            99999976655555555333

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=98.59  E-value=1.1e-07  Score=75.70  Aligned_cols=93  Identities=13%  Similarity=0.043  Sum_probs=73.1

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++....++.+++.++.. .+|+.+++.+.+...+.   .+.+-++.+|.++++++
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~  191 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID-HLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQIL  191 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch-heEEEEEecccCCCCCcCHHHHHHHHHHhCcChhhEE
Confidence            467899999999998 56999999999999999999999876 57888877766554433   45556778899999999


Q ss_pred             EEECCCccccCCCCceEe
Q psy17244        155 ILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~  172 (196)
                      .|+|++.-.......|+.
T Consensus       192 ~vGD~~~Di~~a~~aG~~  209 (243)
T 2hsz_A          192 FVGDSQNDIFAAHSAGCA  209 (243)
T ss_dssp             EEESSHHHHHHHHHHTCE
T ss_pred             EEcCCHHHHHHHHHCCCe
Confidence            999998655444444444

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=98.58  E-value=2.1e-07  Score=80.98  Aligned_cols=109  Identities=21%  Similarity=0.257  Sum_probs=80.6

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc---
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM---  105 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~---  105 (196)
                      .+.+.++||+||||+........     +....+              +...-||+.++|+.|. +.|.++|.|+.+   
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~~~~-----~~~~~~--------------~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~  116 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSGKVF-----PTSPSD--------------WRILYPEIPKKLQELAAEGYKLVIFTNQMGIG  116 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSCSSS-----CSSTTC--------------CEESCTTHHHHHHHHHHTTCEEEEEEECHHHH
T ss_pred             CCCeEEEEeCCCCccccCCCccC-----CCCHHH--------------hhhhcccHHHHHHHHHHCCCeEEEEeCCcccc
Confidence            35679999999999976421100     011111              2346899999999998 579999999966   


Q ss_pred             ---------hhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccC----CCCCcEEEEECCC
Q psy17244        106 ---------EIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAIS----PDLSSIFILDNSP  160 (196)
Q Consensus       106 ---------~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~----~~~~~~iiIDD~~  160 (196)
                               ..++..+++.++..   |..+++.+.|...+.   .+.+-++.+|    .+++++++|.|+.
T Consensus       117 ~g~~~~~~~~~~~~~~l~~lgl~---fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~  184 (416)
T 3zvl_A          117 RGKLPAEVFKGKVEAVLEKLGVP---FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  184 (416)
T ss_dssp             TTSSCHHHHHHHHHHHHHHHTSC---CEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCC---EEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence                     33488888888763   777888887776543   5667778787    8999999999997

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=98.53  E-value=3e-08  Score=83.41  Aligned_cols=95  Identities=5%  Similarity=0.100  Sum_probs=72.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCC----------CC---CCCcccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCT----------PE---LGSYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~----------~~---~~~~~KdL~  144 (196)
                      +..+||+.++|+.|. +.+.++|.|++...+++.+++.++.. .+|..++..+...          ..   ...+.+-++
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~-~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~  256 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD-YAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA  256 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC-eEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence            568999999999998 57999999999999999999999886 5777665433211          00   113456667


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++|.++++++.|.|++.-.......|+.+.
T Consensus       257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va  286 (317)
T 4eze_A          257 RLNIATENIIACGDGANDLPMLEHAGTGIA  286 (317)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCCCcceEEEEeCCHHHHHHHHHCCCeEE
Confidence            789999999999999976655555555443

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=98.49  E-value=2.2e-08  Score=79.25  Aligned_cols=96  Identities=6%  Similarity=-0.079  Sum_probs=74.8

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...|++.++|+.+.+.+.++|.|++....+..+++.++..   |+.+++.+.+...++   .+.+-++.+|.++++++.
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  195 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---WDMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVML  195 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---CSEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---cceEEeecccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence            45679999999999977999999999999999999998764   777766655444332   566778889999999999


Q ss_pred             EECCCccccCCCCceEeeceec
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      |+|+..-.......|+.+..+.
T Consensus       196 iGD~~~Di~~a~~aG~~~~~~~  217 (254)
T 3umc_A          196 CAAHNYDLKAARALGLKTAFIA  217 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEEC
T ss_pred             EcCchHhHHHHHHCCCeEEEEe
Confidence            9999876555555566555554

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=98.47  E-value=1.7e-07  Score=74.82  Aligned_cols=97  Identities=7%  Similarity=-0.126  Sum_probs=77.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeE-EEEecCCC-CCCC---CccccccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRR-RYYRQHCT-PELG---SYTKDLSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~-~l~r~~c~-~~~~---~~~KdL~~l~~~~~~  152 (196)
                      ....|++.++|+.+. ..+.++|.|++...+++.+++.++.. .+|.. +++.+.+. ..++   .+.+-++.+|.++++
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~  187 (259)
T 4eek_A          109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT-ELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER  187 (259)
T ss_dssp             CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH-HHHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH-hhccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence            578999999999998 47999999999999999999998876 57887 77666655 4332   456778888999999


Q ss_pred             EEEEECCCccccCCCCceEeecee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++.|+|+..-.......|+.+..+
T Consensus       188 ~i~iGD~~~Di~~a~~aG~~~i~v  211 (259)
T 4eek_A          188 CVVIEDSVTGGAAGLAAGATLWGL  211 (259)
T ss_dssp             EEEEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEEEcCCHHHHHHHHHCCCEEEEE
Confidence            999999997665555556654444

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.45  E-value=2.5e-07  Score=72.81  Aligned_cols=115  Identities=12%  Similarity=0.005  Sum_probs=79.7

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch---
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME---  106 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~---  106 (196)
                      ..+.+++|+||||+.......       . .               ......||+.++|+.|. +.+.++|.|+++.   
T Consensus        30 ~~k~i~~D~DGtl~~~~~y~~-------~-~---------------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~   86 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDYPS-------D-P---------------AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIAR   86 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSCTT-------C-G---------------GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHT
T ss_pred             cCCEEEEeCCCCcCCCCcccC-------C-c---------------ccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCc
Confidence            457899999999997632110       0 0               01456899999999998 6899999999998   


Q ss_pred             ------------hhHHHHHHHhcCCCceeeEEEEe------------cCCCCCCC---CccccccccCCCCCcEEEEECC
Q psy17244        107 ------------IYGAAVADKLDARRHILRRRYYR------------QHCTPELG---SYTKDLSAISPDLSSIFILDNS  159 (196)
Q Consensus       107 ------------~ya~~vl~~ldp~~~~f~~~l~r------------~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~  159 (196)
                                  ..+..+++.++..   |...+..            +.+...++   .+.+-++++|.+++++++|.|+
T Consensus        87 ~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~  163 (218)
T 2o2x_A           87 GYFGWSAFAAVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDK  163 (218)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESS
T ss_pred             ccccHHHHHHHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCC
Confidence                        7888888887643   4333322            23332222   4566678889999999999999


Q ss_pred             CccccCCCCceE
Q psy17244        160 PGAYRGFPDNAI  171 (196)
Q Consensus       160 ~~~~~~~~~N~I  171 (196)
                      ..-.......|+
T Consensus       164 ~~Di~~a~~aG~  175 (218)
T 2o2x_A          164 LADMQAGKRAGL  175 (218)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHCCC
Confidence            965544444443

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.44  E-value=5.2e-08  Score=75.98  Aligned_cols=91  Identities=15%  Similarity=0.140  Sum_probs=68.5

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.+.+.+.++|.|++...     ++.++.. .+|+.+++.+.+...++   .+.+-++.+|.+++++++
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYFAFALCAEDLGIGKPDPAPFLEALRRAKVDASAAVH  177 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGCSEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHeeeeEEccccCCCCcCHHHHHHHHHHhCCCchheEE
Confidence            45789999999999966999999999876     4555554 57888888776554433   567778889999999999


Q ss_pred             EECCC-ccccCCCCceEeece
Q psy17244        156 LDNSP-GAYRGFPDNAIPIKS  175 (196)
Q Consensus       156 IDD~~-~~~~~~~~N~I~v~~  175 (196)
                      |+|+. .-.......|+.+..
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~  198 (230)
T 3vay_A          178 VGDHPSDDIAGAQQAGMRAIW  198 (230)
T ss_dssp             EESCTTTTHHHHHHTTCEEEE
T ss_pred             EeCChHHHHHHHHHCCCEEEE
Confidence            99998 555444445554443

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.43  E-value=3.4e-08  Score=74.21  Aligned_cols=117  Identities=9%  Similarity=-0.008  Sum_probs=81.1

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.++||+||||+++...-.      ..  ..           .......+++.  .|+.|. +.+.++|.|++....+
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~------~~--~~-----------~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~   61 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYD------QT--GN-----------EWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIV   61 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEEC------SS--SC-----------EEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHH
T ss_pred             cceEEEEcCCCceEcCcEEEc------CC--Cc-----------EEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHH
Confidence            356899999999998652100      00  00           01123344443  789997 5799999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeece
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                      +.+++.++.. .+|..      +......+.+-++.++.+++++++|.|+..-.......|+.+..
T Consensus        62 ~~~~~~~gl~-~~~~~------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~  120 (164)
T 3e8m_A           62 RRRAEKLKVD-YLFQG------VVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP  120 (164)
T ss_dssp             HHHHHHTTCS-EEECS------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC
T ss_pred             HHHHHHcCCC-Eeecc------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc
Confidence            9999999876 45543      22222345666788899999999999999866666666765544

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.43  E-value=5e-08  Score=76.40  Aligned_cols=96  Identities=11%  Similarity=0.129  Sum_probs=68.9

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEE--------ecCCC-----C-CCC-Cccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYY--------RQHCT-----P-ELG-SYTK  141 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~--------r~~c~-----~-~~~-~~~K  141 (196)
                      +..+||+.++|+.|. +.+.++|.|++...+++.+++.++... .+|..++.        .....     . .++ .+.+
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  164 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL  164 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence            568999999999998 579999999999999999999998752 47776541        11111     0 111 2333


Q ss_pred             cccccCCCCCcEEEEECCCccccCCCCceEeeceec
Q psy17244        142 DLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       142 dL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      -++.+|.  +++++|+|++.-.......|+ ...|.
T Consensus       165 ~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~  197 (225)
T 1nnl_A          165 LKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFG  197 (225)
T ss_dssp             HHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEEC
T ss_pred             HHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEec
Confidence            3455565  789999999987777777777 44554

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=98.43  E-value=4.1e-07  Score=72.64  Aligned_cols=96  Identities=7%  Similarity=-0.156  Sum_probs=75.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCC-CcE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDL-SSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~-~~~  153 (196)
                      +...||+.++|+.+. +.+.++|.|++....+..+++.++.....|+.+++.+.+...++   .+.+-++.+|.++ +++
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~  189 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGC  189 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGE
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCCccE
Confidence            467899999999998 56999999999999999999998766322787887776654432   5667788899999 999


Q ss_pred             EEEECCCccccCCCCceEeec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +.|.|++.-.......|+.+.
T Consensus       190 i~vGD~~~Di~~a~~aG~~~v  210 (277)
T 3iru_A          190 IKVDDTLPGIEEGLRAGMWTV  210 (277)
T ss_dssp             EEEESSHHHHHHHHHTTCEEE
T ss_pred             EEEcCCHHHHHHHHHCCCeEE
Confidence            999999976555555554433

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=98.41  E-value=1.2e-08  Score=78.92  Aligned_cols=83  Identities=12%  Similarity=0.038  Sum_probs=57.8

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEE
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiI  156 (196)
                      +...||+.++|+.|.+  .+.++|.|++....+..+++.++.    |+.+++.+           -++++|.+++++++|
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl----f~~i~~~~-----------~~~~~~~~~~~~~~v  136 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW----VEQHLGPQ-----------FVERIILTRDKTVVL  136 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH----HHHHHCHH-----------HHTTEEECSCGGGBC
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc----hhhhcCHH-----------HHHHcCCCcccEEEE
Confidence            5678999999999985  699999999999999999888764    43333221           355667778888886


Q ss_pred             ECCCcc----ccCCC-CceEeecee
Q psy17244        157 DNSPGA----YRGFP-DNAIPIKSW  176 (196)
Q Consensus       157 DD~~~~----~~~~~-~N~I~v~~f  176 (196)
                      .|+..-    ..... ..|+.+.-|
T Consensus       137 gDs~~dD~~~i~~A~~~aG~~~i~~  161 (193)
T 2i7d_A          137 GDLLIDDKDTVRGQEETPSWEHILF  161 (193)
T ss_dssp             CSEEEESSSCCCSSCSSCSSEEEEE
T ss_pred             CCchhhCcHHHhhcccccccceEEE
Confidence            555443    34444 445444433

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.40  E-value=1.7e-07  Score=72.22  Aligned_cols=96  Identities=5%  Similarity=-0.060  Sum_probs=72.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...|++.++|+.+. +.+.++|.|++...++..+++.++.. .+|+..++.+.....++   .+.+-++.+|.++++++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i  166 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD-DWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL  166 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT-TCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch-hheeeeeehhhcCCCCCChHHHHHHHHHhCCChHHeE
Confidence            456899999999998 57999999999999999999988765 56777777665543332   34566778899999999


Q ss_pred             EEECCCccccCCCCceEeece
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~  175 (196)
                      .|+|++.-.......|+.+..
T Consensus       167 ~iGD~~nDi~~~~~aG~~~~~  187 (225)
T 3d6j_A          167 YIGDSTVDAGTAAAAGVSFTG  187 (225)
T ss_dssp             EEESSHHHHHHHHHHTCEEEE
T ss_pred             EEcCCHHHHHHHHHCCCeEEE
Confidence            999998755444444544433

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.39  E-value=1.8e-07  Score=72.54  Aligned_cols=114  Identities=11%  Similarity=0.056  Sum_probs=77.9

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +.+.+|||+||||+++...-.      .            .+ ..-..+..+++.  +|++|. +.+.++|.|++....+
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~------~------------~~-~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~   76 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFM------E------------DG-SEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIV   76 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEE------T------------TS-CEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH
T ss_pred             hCCEEEEcCCCCcCCccEeec------c------------CC-cEeeeeccccHH--HHHHHHHCCCEEEEEECcChHHH
Confidence            457899999999998752100      0            00 011123444444  889997 5799999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCC-CccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELG-SYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~-~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +.+++.++.. .+|...       ..++ .+.+-++.+|.++++++.|.|+..-.......|+.+
T Consensus        77 ~~~~~~lgl~-~~f~~~-------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~  133 (189)
T 3mn1_A           77 ERRAKSLGIE-HLFQGR-------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGM  133 (189)
T ss_dssp             HHHHHHHTCS-EEECSC-------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHcCCH-HHhcCc-------CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence            9999999876 466432       2222 344556778999999999999997554444444443

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.38  E-value=2.6e-07  Score=73.28  Aligned_cols=116  Identities=9%  Similarity=0.072  Sum_probs=79.8

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +-+.+|||+||||+++...-.      .            .+ ..-.....+++.  +|+.|. +.+.++|.|+.....+
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~~------~------------~~-~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~  106 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYMG------N------------QG-EELKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLL  106 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEEE------T------------TS-CEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH
T ss_pred             CCCEEEEeCCCCEECCHHHHh------h------------hh-HHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHH
Confidence            457899999999999863100      0            00 011123444555  889997 6899999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +.+++.++.. .+|..+      ......+.+-++.+|.++++++.|-|+..-.......|+.+.
T Consensus       107 ~~~l~~lgi~-~~f~~~------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a  164 (211)
T 3ij5_A          107 EDRANTLGIT-HLYQGQ------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVA  164 (211)
T ss_dssp             HHHHHHHTCC-EEECSC------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEE
T ss_pred             HHHHHHcCCc-hhhccc------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEE
Confidence            9999999876 455432      111223445667789999999999999986655555555543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.38  E-value=2.2e-07  Score=71.28  Aligned_cols=114  Identities=6%  Similarity=-0.022  Sum_probs=79.1

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.++||+||||+++...-                  . ..  ....-...|...+.|+.|. +.+.++|.|+.....+.
T Consensus         8 ik~i~~DlDGTL~~~~~~~------------------~-~~--~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~   66 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLHY------------------D-AN--GEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILR   66 (180)
T ss_dssp             CCEEEEECTTTTSCSEEEE------------------E-TT--EEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHH
T ss_pred             CeEEEEeCCCCcCCCCeee------------------c-cC--cceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHH
Confidence            4689999999999764210                  0 00  1122345678889999997 67999999999999999


Q ss_pred             HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .+++.++.. .+|..      +......+.+-++.+|.++++++.|.|+..-.......|+.+
T Consensus        67 ~~~~~lgl~-~~~~~------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~  122 (180)
T 1k1e_A           67 RRIADLGIK-LFFLG------KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSF  122 (180)
T ss_dssp             HHHHHHTCC-EEEES------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHcCCc-eeecC------CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE
Confidence            999999876 34421      221122334456777889999999999997554433444443

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=98.36  E-value=6.4e-08  Score=76.86  Aligned_cols=98  Identities=6%  Similarity=0.018  Sum_probs=72.0

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHH-hcCCCceeeEEEEec--CCCCCCC---CccccccccCCCC-
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADK-LDARRHILRRRYYRQ--HCTPELG---SYTKDLSAISPDL-  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~-ldp~~~~f~~~l~r~--~c~~~~~---~~~KdL~~l~~~~-  150 (196)
                      +...||+.++|+.+.+ .+.++|.|++....+...+.. ++.. .+|+.+++.+  .+...++   .+.+-++++|.++ 
T Consensus       111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~  189 (250)
T 3l5k_A          111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPA  189 (250)
T ss_dssp             CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSSCCC
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hheeeEEecchhhccCCCCChHHHHHHHHHcCCCCC
Confidence            5689999999999984 699999999998887776643 3333 4677777766  4444332   5667888889888 


Q ss_pred             -CcEEEEECCCccccCCCCceEeeceec
Q psy17244        151 -SSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       151 -~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                       ++++.|+|+..-.......|+.+..+.
T Consensus       190 ~~~~i~iGD~~~Di~~a~~aG~~~i~v~  217 (250)
T 3l5k_A          190 MEKCLVFEDAPNGVEAALAAGMQVVMVP  217 (250)
T ss_dssp             GGGEEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             cceEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence             999999999976655555665444433

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.30  E-value=6.2e-07  Score=70.28  Aligned_cols=93  Identities=11%  Similarity=0.019  Sum_probs=64.8

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC-----CC--------Cccccccc
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE-----LG--------SYTKDLSA  145 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~-----~~--------~~~KdL~~  145 (196)
                      .++||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|...+..+.....     ..        .+.+-++.
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~  170 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ-HLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG  170 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC-EEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC-EEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence            46999999999998 67999999999999999999999876 466554432211000     00        11233455


Q ss_pred             cC---CCCCcEEEEECCCccccCCCCceEee
Q psy17244        146 IS---PDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       146 l~---~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +|   .++++++.|.|+..-.......|+.+
T Consensus       171 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~  201 (232)
T 3fvv_A          171 MGLALGDFAESYFYSDSVNDVPLLEAVTRPI  201 (232)
T ss_dssp             TTCCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred             cCCCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence            67   78999999999997554433344433

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.27  E-value=1.7e-07  Score=73.45  Aligned_cols=109  Identities=10%  Similarity=0.057  Sum_probs=75.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHH-------HHHhh-hCceEEEEc
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFF-------LDIVS-QWYELVVFT  102 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eF-------L~~l~-~~yei~I~T  102 (196)
                      +-+.++||+||||+.+...-                            -..+|.+.+|       |+.|. ..+.++|.|
T Consensus        24 ~ik~vifD~DGtL~d~~~~~----------------------------~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT   75 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYM----------------------------GNQGEELKTFHTRDGYGVKALMNAGIEIAIIT   75 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEE----------------------------CTTSCEECCCCTTHHHHHHHHHHTTCEEEEEC
T ss_pred             CCCEEEEcCCCCcCCCcEEE----------------------------ccCchhhheeecccHHHHHHHHHCCCEEEEEE
Confidence            56799999999999853210                            0012233334       88887 679999999


Q ss_pred             CCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        103 ASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       103 ~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++....++.+++.++.. .+|..      +......+.+-++.+|.++++++.|.|+..-.......|+.+.
T Consensus        76 ~~~~~~~~~~l~~lgi~-~~~~~------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va  140 (195)
T 3n07_A           76 GRRSQIVENRMKALGIS-LIYQG------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVC  140 (195)
T ss_dssp             SSCCHHHHHHHHHTTCC-EEECS------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             CcCHHHHHHHHHHcCCc-EEeeC------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEE
Confidence            99999999999999876 34432      1111123445567779999999999999976654444555443

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.25  E-value=6e-07  Score=72.83  Aligned_cols=96  Identities=10%  Similarity=0.032  Sum_probs=73.2

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCC-----
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISP-----  148 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~-----  148 (196)
                      ....||+.++|+.+.+  .+.++|.|++...++..+++.++..  .|..+++.+.+...++   .+.+-++.+|.     
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  190 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQ  190 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CCSSEECGGGCSSCTTSSHHHHHHHHHTTCCCCSS
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--ccCEEEEcccCCCCCCChHHHHHHHHHcCCCcccc
Confidence            4678999999999985  6999999999999999999998765  3666776665543332   45566788898     


Q ss_pred             --CCCcEEEEECCCccccCCCCceEeecee
Q psy17244        149 --DLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       149 --~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                        ++++++.|.|++.-.......|+.+..+
T Consensus       191 ~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v  220 (275)
T 2qlt_A          191 DPSKSKVVVFEDAPAGIAAGKAAGCKIVGI  220 (275)
T ss_dssp             CGGGSCEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred             CCCcceEEEEeCCHHHHHHHHHcCCEEEEE
Confidence              9999999999997655544555544443

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.21  E-value=6.7e-07  Score=68.46  Aligned_cols=112  Identities=13%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +-+.++||+||||++....      ...  ...           .......++++  +|++|. +.+.++|.|++...++
T Consensus        11 ~~k~vifD~DGTL~d~~~~------~~~--~~~-----------~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~   69 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVL------IDS--DGR-----------EFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVV   69 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCE------ECT--TCC-----------EEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHH
T ss_pred             cCCEEEEeCCCCcCcCCEe------ecC--Ccc-----------HhHhcccccHH--HHHHHHHCCCeEEEEECcChHHH
Confidence            4568999999999983211      000  000           01113344444  788997 6799999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      +.+++.++..  +|..      +......+.+-++.+|.++++++.|-|+..-.......++
T Consensus        70 ~~~~~~lgi~--~~~~------~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~  123 (176)
T 3mmz_A           70 AARARKLKIP--VLHG------IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGW  123 (176)
T ss_dssp             HHHHHHHTCC--EEES------CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             HHHHHHcCCe--eEeC------CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence            9999999865  3332      1111224455667789999999999999875543333333

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.21  E-value=2e-07  Score=72.50  Aligned_cols=115  Identities=10%  Similarity=0.074  Sum_probs=75.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +-+.++||+||||+.....-      .+.. +  .    .      .....++++  -|+.|. +.+.++|.|+++...+
T Consensus        18 ~ik~vifD~DGtL~~~~~~~------~~~~-~--~----~------~~~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~~   76 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHI------DNHG-N--E----L------KSFHVQDGM--GLKLLMAAGIQVAIITTAQNAVV   76 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEE------CTTC-C--E----E------CCBCHHHHH--HHHHHHHTTCEEEEECSCCSHHH
T ss_pred             cCCEEEEeCCCCCCCCceee------cCCc-h--h----h------hhccccChH--HHHHHHHCCCeEEEEeCcChHHH
Confidence            45799999999999743110      0000 0  0    0      001122222  388887 5799999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      ..+++.++.. .+|..      +......+.+-++.++.++++++.|.|+..-.......|+.+
T Consensus        77 ~~~l~~lgl~-~~~~~------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~  133 (191)
T 3n1u_A           77 DHRMEQLGIT-HYYKG------QVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV  133 (191)
T ss_dssp             HHHHHHHTCC-EEECS------CSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHHHcCCc-cceeC------CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEE
Confidence            9999999876 34532      222223455667778999999999999997655444455554

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.19  E-value=2.2e-07  Score=72.02  Aligned_cols=83  Identities=10%  Similarity=0.104  Sum_probs=58.0

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEE-
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFI-  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~ii-  155 (196)
                      +...||+.++|+.|.+  .+.++|.|++....+..+++.++....+|.               .+-++.+|.+++++++ 
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------------GGGGGGEEECSCSTTSC
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------------HHHHHHhccCCccEEEE
Confidence            5678999999999985  799999999999999888888765422553               3445556666777766 


Q ss_pred             ----EECCCccccCCC-CceEeeceec
Q psy17244        156 ----LDNSPGAYRGFP-DNAIPIKSWF  177 (196)
Q Consensus       156 ----IDD~~~~~~~~~-~N~I~v~~f~  177 (196)
                          +||++.. .... ..|+.+.-|.
T Consensus       139 gDs~~dD~~~~-~~a~~~aG~~~i~~~  164 (197)
T 1q92_A          139 ADLLIDDRPDI-TGAEPTPSWEHVLFT  164 (197)
T ss_dssp             CSEEEESCSCC-CCSCSSCSSEEEEEC
T ss_pred             CcccccCCchh-hhcccCCCceEEEec
Confidence                5655543 3333 4455444443

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.11  E-value=6.6e-06  Score=63.37  Aligned_cols=115  Identities=10%  Similarity=0.085  Sum_probs=76.3

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +.+.++||+||||++....      ..+.  ..           ....+..+++  .+|+.|. +.+.++|.|+++...+
T Consensus        25 ~ik~vifD~DGTL~~~~~~------~~~~--~~-----------~~~~~~~~d~--~~l~~L~~~g~~v~ivT~~~~~~~   83 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIY------MGNN--GE-----------ELKAFNVRDG--YGIRCALTSDIEVAIITGRKAKLV   83 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEE------EETT--SC-----------EEEEEEHHHH--HHHHHHHTTTCEEEEECSSCCHHH
T ss_pred             cCCEEEEeCCCCcCCCCEE------ecCC--Cc-----------EEEEeecccH--HHHHHHHHCCCeEEEEeCCChHHH
Confidence            5679999999999975310      0000  00           0011222222  4888997 5799999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCC-CCccccccccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPEL-GSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~-~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +.+++.++.. .+|.       +...+ ..+.+-++.+|.++++++.|.|+..-.......|+.+.
T Consensus        84 ~~~l~~lgl~-~~~~-------~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~  141 (188)
T 2r8e_A           84 EDRCATLGIT-HLYQ-------GQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVA  141 (188)
T ss_dssp             HHHHHHHTCC-EEEC-------SCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEE
T ss_pred             HHHHHHcCCc-eeec-------CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEE
Confidence            9999999865 3442       12222 24455567778899999999999976655555565553

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=98.09  E-value=8.8e-06  Score=62.15  Aligned_cols=86  Identities=9%  Similarity=0.068  Sum_probs=61.8

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC-CceeeEEEEe--cC-------CCCCCCCcccccccc-C
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR-RHILRRRYYR--QH-------CTPELGSYTKDLSAI-S  147 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~-~~~f~~~l~r--~~-------c~~~~~~~~KdL~~l-~  147 (196)
                      ..+||+.++|+.+. +.+.++|.|++...+++.+++.++.. ..+|...+..  +.       ....++...+-+... |
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  161 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG  161 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence            37899999999998 57999999999999999999998764 2355433322  11       111223444555444 8


Q ss_pred             CCCCcEEEEECCCccccC
Q psy17244        148 PDLSSIFILDNSPGAYRG  165 (196)
Q Consensus       148 ~~~~~~iiIDD~~~~~~~  165 (196)
                      .++++++.|.|+..-...
T Consensus       162 ~~~~~~~~vGD~~~Di~~  179 (219)
T 3kd3_A          162 LIDGEVIAIGDGYTDYQL  179 (219)
T ss_dssp             GCCSEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEECCHhHHHH
Confidence            899999999999875543

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=98.09  E-value=1.8e-06  Score=74.83  Aligned_cols=96  Identities=9%  Similarity=-0.074  Sum_probs=72.5

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCC------chhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCC
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTAS------MEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISP  148 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~------~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~  148 (196)
                      +...||+.++|+.|++ .+.++|.|++      ........+..+.   .+|+.+++.+.+...+.   .|.+-++++|.
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~  175 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK---MHFDFLIESCQVGMVKPEPQIYKFLLDTLKA  175 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh---hheeEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence            4678999999999984 6999999998      4444444444444   46888888876665544   67888999999


Q ss_pred             CCCcEEEEECCCccccCCCCceEeeceec
Q psy17244        149 DLSSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       149 ~~~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +++++++|+|+..-.......|+.+.-+.
T Consensus       176 ~p~~~~~v~D~~~di~~a~~aG~~~~~~~  204 (555)
T 3i28_A          176 SPSEVVFLDDIGANLKPARDLGMVTILVQ  204 (555)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             ChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence            99999999999876655555566555444

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=98.09  E-value=1.3e-06  Score=75.56  Aligned_cols=95  Identities=8%  Similarity=0.015  Sum_probs=71.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC----------C---CCCcccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP----------E---LGSYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~----------~---~~~~~KdL~  144 (196)
                      +..+||+.++|+.|. ..+.++|.|++...+++.+++.++.. .+|...+...+...          .   ...+.+-++
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~  333 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD-YVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ  333 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS-EEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc-ceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence            578999999999998 56999999999999999999999886 56655442221111          1   113455667


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++|.++++++.|.|+..-.......|+.+.
T Consensus       334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va  363 (415)
T 3p96_A          334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIA  363 (415)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            789999999999999976655555566554

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.04  E-value=6.3e-07  Score=70.79  Aligned_cols=90  Identities=9%  Similarity=-0.028  Sum_probs=58.9

Q ss_pred             eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE------ecCCCCCCCCccccccccCCCCCcE
Q psy17244         81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY------RQHCTPELGSYTKDLSAISPDLSSI  153 (196)
Q Consensus        81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~------r~~c~~~~~~~~KdL~~l~~~~~~~  153 (196)
                      ..|++.++|+.|. +.+.++|.|++....++.+++.|..   +|..+..      ......+...+.+-++++|.    +
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~---~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~  161 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLAD---NFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R  161 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHH---HTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHH---hcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence            4789999999997 6899999999988777777666431   2322210      01112223355566666665    9


Q ss_pred             EEEECCCccccCCCCceEeeceec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      ++|+|++.-.......|+.+..+.
T Consensus       162 l~VGDs~~Di~aA~~aG~~~i~v~  185 (211)
T 2b82_A          162 IFYGDSDNDITAARDVGARGIRIL  185 (211)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEECC
T ss_pred             EEEECCHHHHHHHHHCCCeEEEEe
Confidence            999999976655555666554443

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=97.99  E-value=6.9e-06  Score=62.63  Aligned_cols=94  Identities=12%  Similarity=0.139  Sum_probs=65.9

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecC-----------CC-CCCC-Ccccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH-----------CT-PELG-SYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~-----------c~-~~~~-~~~KdL~  144 (196)
                      ..+.|++.++|+.+. +.+.++|+|++...+++.+++.++.. .+|...+....           +. ..++ .+.+-++
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~  153 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD-YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  153 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC-eEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence            356799999999998 57999999999999999999988765 35544332211           11 0111 2344456


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .+|.++++++.|-|+..-.......|+.+
T Consensus       154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~  182 (211)
T 1l7m_A          154 IEGINLEDTVAVGDGANDISMFKKAGLKI  182 (211)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred             HcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence            67899999999999997665544555544

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.98  E-value=3.3e-06  Score=65.56  Aligned_cols=95  Identities=15%  Similarity=0.130  Sum_probs=76.9

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.|.+.+.++|.|++....++.+++.++.. .+|+.+++.+  ...++   .+.+-++++|.+++++++
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~-~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~  159 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIH-HFFDGIYGSS--PEAPHKADVIHQALQTHQLAPEQAII  159 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCch-hheeeeecCC--CCCCCChHHHHHHHHHcCCCcccEEE
Confidence            46789999999999889999999999999999999999876 6888888776  22222   567788899999999999


Q ss_pred             EECCCccccCCCCceEeecee
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f  176 (196)
                      |+|++.-.......|+.+..+
T Consensus       160 vgDs~~Di~~a~~aG~~~i~v  180 (210)
T 2ah5_A          160 IGDTKFDMLGARETGIQKLAI  180 (210)
T ss_dssp             EESSHHHHHHHHHHTCEEEEE
T ss_pred             ECCCHHHHHHHHHCCCcEEEE
Confidence            999987665555566654443

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=97.96  E-value=6.9e-06  Score=62.40  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=48.3

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCc---hh--hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASM---EI--YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~---~~--ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~  153 (196)
                      +...||+.++|+.|++.+.++|.|+++   ..  .+...+....+...++..+++.+.            .++    +.+
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~------------~~l----~~~  131 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK------------NII----LAD  131 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG------------GGB----CCS
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc------------Cee----ccc
Confidence            567899999999999779999999983   22  224445553222134444443322            012    678


Q ss_pred             EEEECCCccccCCCCceEee
Q psy17244        154 FILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v  173 (196)
                      ++|||++......-..+|.+
T Consensus       132 l~ieDs~~~i~~aaG~~i~~  151 (180)
T 3bwv_A          132 YLIDDNPKQLEIFEGKSIMF  151 (180)
T ss_dssp             EEEESCHHHHHHCSSEEEEE
T ss_pred             EEecCCcchHHHhCCCeEEe
Confidence            99999998543222244444

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=97.95  E-value=2.6e-05  Score=60.73  Aligned_cols=95  Identities=9%  Similarity=0.008  Sum_probs=70.6

Q ss_pred             EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~  153 (196)
                      .+...||+.++|+.|.+ .+.++|.|++.. .+..+++.++.. .+|+.+++.+.+...+   ..+.+-++++|.++   
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~---  167 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK-KYFDALALSYEIKAVKPNPKIFGFALAKVGYPA---  167 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG-GGCSEEC-----------CCHHHHHHHHHCSSE---
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH-hHeeEEEeccccCCCCCCHHHHHHHHHHcCCCe---
Confidence            57889999999999985 699999999977 588999998876 5888888877665443   35666778888776   


Q ss_pred             EEEECCCc-cccCCCCceEeeceec
Q psy17244        154 FILDNSPG-AYRGFPDNAIPIKSWF  177 (196)
Q Consensus       154 iiIDD~~~-~~~~~~~N~I~v~~f~  177 (196)
                      ++|+|++. -.......|+.+.-+.
T Consensus       168 ~~vgD~~~~Di~~a~~aG~~~i~v~  192 (220)
T 2zg6_A          168 VHVGDIYELDYIGAKRSYVDPILLD  192 (220)
T ss_dssp             EEEESSCCCCCCCSSSCSEEEEEBC
T ss_pred             EEEcCCchHhHHHHHHCCCeEEEEC
Confidence            99999998 7777777787766554

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.92  E-value=1.2e-05  Score=64.87  Aligned_cols=92  Identities=7%  Similarity=0.012  Sum_probs=75.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.|.+.+.++|.|++....+..+++.++.. .+|+.+++.+.+...++   .+.+-++++|.+++++++
T Consensus       120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~  198 (260)
T 2gfh_A          120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQ-SYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM  198 (260)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHH-hhhheEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence            46779999999999978999999999999999999999887 68998888877665443   567778889999999999


Q ss_pred             EECC-CccccCCCCceE
Q psy17244        156 LDNS-PGAYRGFPDNAI  171 (196)
Q Consensus       156 IDD~-~~~~~~~~~N~I  171 (196)
                      |+|+ ..-.......|+
T Consensus       199 vGDs~~~Di~~A~~aG~  215 (260)
T 2gfh_A          199 VGDTLETDIQGGLNAGL  215 (260)
T ss_dssp             EESCTTTHHHHHHHTTC
T ss_pred             ECCCchhhHHHHHHCCC
Confidence            9996 654443334444

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.91  E-value=1e-05  Score=62.73  Aligned_cols=98  Identities=11%  Similarity=0.126  Sum_probs=79.3

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...|++.++|+.+.+.+.++|.|++....+..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++.
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  184 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVD-RYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESLM  184 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChH-hhceeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence            56789999999999988999999999999999999998876 57888888877665543   466778889999999999


Q ss_pred             EECCC-ccccCCCCceEeeceec
Q psy17244        156 LDNSP-GAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       156 IDD~~-~~~~~~~~N~I~v~~f~  177 (196)
                      |+|++ .-.......|+.+..+.
T Consensus       185 iGD~~~~Di~~a~~aG~~~~~~~  207 (240)
T 3qnm_A          185 IGDSWEADITGAHGVGMHQAFYN  207 (240)
T ss_dssp             EESCTTTTHHHHHHTTCEEEEEC
T ss_pred             ECCCchHhHHHHHHcCCeEEEEc
Confidence            99996 65554445555555444

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=97.91  E-value=2.7e-06  Score=65.40  Aligned_cols=102  Identities=6%  Similarity=-0.009  Sum_probs=82.0

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHH------hcCCCceeeEEEEecCCCCCCC---CccccccccCC
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADK------LDARRHILRRRYYRQHCTPELG---SYTKDLSAISP  148 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~------ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~  148 (196)
                      .....|++.++|+.+.+.+.++|.|++...++..+++.      ++.. .+|+.+++.+.+...++   .+.+-++.+|.
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~  165 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFFDKVYASCQMGKYKPNEDIFLEMIADSGM  165 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGSSEEEEHHHHTCCTTSHHHHHHHHHHHCC
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHcCeEEeecccCCCCCCHHHHHHHHHHhCC
Confidence            45788999999999988999999999999999999887      5554 57888888776555443   45667788899


Q ss_pred             CCCcEEEEECCCccccCCCCceEeeceecCCC
Q psy17244        149 DLSSIFILDNSPGAYRGFPDNAIPIKSWFSDP  180 (196)
Q Consensus       149 ~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~  180 (196)
                      ++++++.|+|++.-.......|+.+..+....
T Consensus       166 ~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          166 KPEETLFIDDGPANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             CGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred             ChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence            99999999999987766667787776666543

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.86  E-value=1.6e-05  Score=62.46  Aligned_cols=94  Identities=12%  Similarity=0.084  Sum_probs=74.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i  171 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD-DFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEAL  171 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH-hhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence            457899999999998 56999999999999999999999876 58888888776655443   45666788899999999


Q ss_pred             EEECCC-ccccCCCCceEee
Q psy17244        155 ILDNSP-GAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I~v  173 (196)
                      .|+|++ .-.......|+.+
T Consensus       172 ~iGD~~~~Di~~a~~aG~~~  191 (241)
T 2hoq_A          172 MVGDRLYSDIYGAKRVGMKT  191 (241)
T ss_dssp             EEESCTTTTHHHHHHTTCEE
T ss_pred             EECCCchHhHHHHHHCCCEE
Confidence            999998 5444333444443

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.85  E-value=1.1e-05  Score=64.85  Aligned_cols=98  Identities=8%  Similarity=-0.080  Sum_probs=77.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.|. +.+.++|.|++.. .+..+++.++.. .+|..+++.+.+...++   .+.+-++.+|.++++++
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~  182 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLR-EHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAA  182 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCG-GGCSCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcH-HhhhEEEeecccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence            568899999999998 5699999999876 478899998876 58888888776654443   56777888999999999


Q ss_pred             EEECCC-ccccCCCCceEeeceecC
Q psy17244        155 ILDNSP-GAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I~v~~f~~  178 (196)
                      +|+|++ .-.......|+.+..+..
T Consensus       183 ~vGD~~~~Di~~a~~aG~~~i~~~~  207 (263)
T 3k1z_A          183 HVGDNYLCDYQGPRAVGMHSFLVVG  207 (263)
T ss_dssp             EEESCHHHHTHHHHTTTCEEEEECC
T ss_pred             EECCCcHHHHHHHHHCCCEEEEEcC
Confidence            999997 555555566666665553

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=97.82  E-value=4.4e-05  Score=61.02  Aligned_cols=84  Identities=11%  Similarity=0.094  Sum_probs=58.7

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEEC
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDN  158 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD  158 (196)
                      ..+||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|..+...     ++....|.+...    -+++.|-|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~f~~~~~~-----~k~~~~k~~~~~----~~~~~vGD  213 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD-DYFAEVLPH-----EKAEKVKEVQQK----YVTAMVGD  213 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-EEECSCCGG-----GHHHHHHHHHTT----SCEEEEEC
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-hHhHhcCHH-----HHHHHHHHHHhc----CCEEEEeC
Confidence            78999999999998 57999999999999999999999876 455433211     222223333222    27899999


Q ss_pred             CCccccCCCCceEee
Q psy17244        159 SPGAYRGFPDNAIPI  173 (196)
Q Consensus       159 ~~~~~~~~~~N~I~v  173 (196)
                      +..-.......|+.|
T Consensus       214 ~~nDi~~~~~Ag~~v  228 (280)
T 3skx_A          214 GVNDAPALAQADVGI  228 (280)
T ss_dssp             TTTTHHHHHHSSEEE
T ss_pred             CchhHHHHHhCCceE
Confidence            987554444444433

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.78  E-value=2.9e-05  Score=59.50  Aligned_cols=97  Identities=5%  Similarity=-0.031  Sum_probs=77.0

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC--C-CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL--G-SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~--~-~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.+.+.+.++|.|++...+++.+++.++.. .+|+.+++.+.+...+  + .+.+-++.+|.++++++.
T Consensus        82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~  160 (209)
T 2hdo_A           82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFM-MRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  160 (209)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGG-GGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChH-hhccEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEE
Confidence            56899999999999844999999999999999999998776 5788888877765554  2 456677888999999999


Q ss_pred             EECCCccccCCCCceEeecee
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f  176 (196)
                      |+|+..-.......|+.+..+
T Consensus       161 vGD~~~Di~~a~~aG~~~~~~  181 (209)
T 2hdo_A          161 IGDSVSDEQTAQAANVDFGLA  181 (209)
T ss_dssp             EESSHHHHHHHHHHTCEEEEE
T ss_pred             ECCChhhHHHHHHcCCeEEEE
Confidence            999987555444455554443

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.77  E-value=1.6e-05  Score=61.59  Aligned_cols=96  Identities=13%  Similarity=0.039  Sum_probs=76.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ....|++.++|+.+.+.+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++.
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~  177 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIK-DLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcH-HHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence            46789999999999855999999999999999999998876 57888888776554443   466778888999999999


Q ss_pred             EECCC-ccccCCCCceEeece
Q psy17244        156 LDNSP-GAYRGFPDNAIPIKS  175 (196)
Q Consensus       156 IDD~~-~~~~~~~~N~I~v~~  175 (196)
                      |+|++ .-.......|+.+..
T Consensus       178 vGD~~~~Di~~a~~aG~~~~~  198 (234)
T 3u26_A          178 VGDNPVKDCGGSKNLGMTSIL  198 (234)
T ss_dssp             EESCTTTTHHHHHTTTCEEEE
T ss_pred             EcCCcHHHHHHHHHcCCEEEE
Confidence            99998 545544455643333

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=97.77  E-value=6.6e-06  Score=66.67  Aligned_cols=95  Identities=7%  Similarity=0.003  Sum_probs=76.0

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhc---CCCceeeEEEEecCCCCCCC---CccccccccCCCCC
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLD---ARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLS  151 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ld---p~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~  151 (196)
                      +...||+.++|+.|. +.+.++|.|+++...++.+++.++   .. .+|+.+++. .+. .++   .|.+-++++|.+++
T Consensus       129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~-~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~  205 (261)
T 1yns_A          129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN  205 (261)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred             cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChH-hhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence            578899999999997 689999999999999999998654   44 578888776 555 443   57788899999999


Q ss_pred             cEEEEECCCccccCCCCceEeecee
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++++|+|++.-.......|+.+.-+
T Consensus       206 ~~l~VgDs~~di~aA~~aG~~~i~v  230 (261)
T 1yns_A          206 NILFLTDVTREASAAEEADVHVAVV  230 (261)
T ss_dssp             GEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             cEEEEcCCHHHHHHHHHCCCEEEEE
Confidence            9999999987665555666655444

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.76  E-value=0.00012  Score=54.59  Aligned_cols=61  Identities=15%  Similarity=0.168  Sum_probs=46.0

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++|+||||+.......                           -..-|++.+.|+.+. +++.++|+|.-+.....
T Consensus         3 ~k~i~~DlDGTL~~~~~~~i---------------------------~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~   55 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYPRI---------------------------GEEIPFAVETLKLLQQEKHRLILWSVREGELLD   55 (142)
T ss_dssp             CCEEEECCBTTTBCSCTTSC---------------------------CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHH
T ss_pred             CeEEEEECcCCCCCCCCccc---------------------------cccCHHHHHHHHHHHHCCCEEEEEeCCCcccHH
Confidence            56899999999998532100                           123478999999997 68999999998876677


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.+...
T Consensus        56 ~~~~~l~~~   64 (142)
T 2obb_A           56 EAIEWCRAR   64 (142)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHc
Confidence            777776654

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=97.76  E-value=2.6e-06  Score=66.72  Aligned_cols=102  Identities=10%  Similarity=0.012  Sum_probs=79.9

Q ss_pred             eeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHh---cCC--CceeeEEEEecCCCCCCC---CccccccccCCCCC
Q psy17244         80 HKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKL---DAR--RHILRRRYYRQHCTPELG---SYTKDLSAISPDLS  151 (196)
Q Consensus        80 ~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~l---dp~--~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~  151 (196)
                      ...||+.++|+.|.+.+.++|.|++....+..+++.+   ...  ..+|+.+++.+.+...++   .+.+-++++|.+++
T Consensus       112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~g~~~~  191 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPK  191 (229)
T ss_dssp             CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred             hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHHHHcCCCHH
Confidence            3569999999999866999999999999999888655   222  146888888776655543   56778888999999


Q ss_pred             cEEEEECCCccccCCCCceEeeceecCCCC
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPS  181 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~  181 (196)
                      ++++|+|++.-.......|+.+..+.+...
T Consensus       192 ~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~  221 (229)
T 4dcc_A          192 ETFFIDDSEINCKVAQELGISTYTPKAGED  221 (229)
T ss_dssp             GEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred             HeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence            999999999777667777887776665433

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.75  E-value=3.3e-05  Score=59.89  Aligned_cols=93  Identities=8%  Similarity=0.010  Sum_probs=75.3

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccC-CCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAIS-PDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~-~~~~~~i  154 (196)
                      ....||+.++|+.+.+.+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+| .++++++
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i  180 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLF-PFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTL  180 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCG-GGCSEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEE
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChH-hhhheEEEecccCCCCCChHHHHHHHHHcCCCChhHeE
Confidence            56789999999999855999999999999999999998876 58888888877665543   4667788899 9999999


Q ss_pred             EEECCC-ccccCCCCceEe
Q psy17244        155 ILDNSP-GAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I~  172 (196)
                      .|+|++ .-.......|+.
T Consensus       181 ~vGD~~~~Di~~a~~aG~~  199 (238)
T 3ed5_A          181 IIGDSLTADIKGGQLAGLD  199 (238)
T ss_dssp             EEESCTTTTHHHHHHTTCE
T ss_pred             EECCCcHHHHHHHHHCCCE
Confidence            999998 555444444543

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.74  E-value=9.3e-06  Score=61.41  Aligned_cols=113  Identities=13%  Similarity=0.142  Sum_probs=70.5

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC-C---CCccccccccCCCCCcE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE-L---GSYTKDLSAISPDLSSI  153 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~-~---~~~~KdL~~l~~~~~~~  153 (196)
                      +..+|++.++|+.+.+ .+.++|.|++...+++.+ +.++.. .++....+.+..... +   .....-++.+  +++++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~~  153 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDE-FMANRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGFI  153 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSE-EEEEEEEEETTEEEEEECCSSCHHHHHGGG--TTSCE
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCch-hheeeEEeeCCceECCcCCccCHHHHHHhc--CcCcE
Confidence            4789999999999984 699999999999999998 888765 344444333321110 0   1112344445  88999


Q ss_pred             EEEECCCccccCCCCceEeeceecCC-CCC---hHHHhhHHHHhhc
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKSWFSD-PSD---TALLALLPVLDAL  195 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~f~~~-~~D---~~L~~l~~~L~~L  195 (196)
                      +.|.|++.-.......|+.|.--.+. ..|   ..+..|..+|+.|
T Consensus       154 i~iGD~~~Di~~~~~ag~~v~~~~~~~~ad~v~~~~~el~~~l~~l  199 (201)
T 4ap9_A          154 LAMGDGYADAKMFERADMGIAVGREIPGADLLVKDLKELVDFIKNL  199 (201)
T ss_dssp             EEEECTTCCHHHHHHCSEEEEESSCCTTCSEEESSHHHHHHHHHTC
T ss_pred             EEEeCCHHHHHHHHhCCceEEECCCCccccEEEccHHHHHHHHHHh
Confidence            99999997665444455543211111 111   1244566666655

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.73  E-value=4.5e-05  Score=60.11  Aligned_cols=93  Identities=5%  Similarity=-0.054  Sum_probs=75.1

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.|. +.+.++|.|++....++.+++.++..  +|+.+++.+.+...++   .+.+-++++|.++++++
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~  186 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCV  186 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TCSEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ceeEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence            467899999999997 57999999999999999999998864  6888888876654433   56677888999999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|.|++.-.......|+.+
T Consensus       187 ~vGDs~~Di~~a~~aG~~~  205 (240)
T 2hi0_A          187 YIGDSEIDIQTARNSEMDE  205 (240)
T ss_dssp             EEESSHHHHHHHHHTTCEE
T ss_pred             EEcCCHHHHHHHHHCCCeE
Confidence            9999987555444555543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.66  E-value=2.9e-05  Score=59.52  Aligned_cols=95  Identities=8%  Similarity=0.093  Sum_probs=72.5

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceee-EEEEecCCC------CCCCCccccccccCCCCC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILR-RRYYRQHCT------PELGSYTKDLSAISPDLS  151 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~-~~l~r~~c~------~~~~~~~KdL~~l~~~~~  151 (196)
                      +..+||+.++|+.+.+.+.++|.|++...+++.+++.++.. .+|. ...+.++..      .....+.+-++.++..++
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~  146 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFP-TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY  146 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCC-CEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCc-ceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence            56799999999999855999999999999999999999887 5774 444443332      222345566777788889


Q ss_pred             cEEEEECCCccccCCCCceEeec
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +++.|+|++.-.......|+.+.
T Consensus       147 ~~~~iGD~~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          147 RVIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             EEEEEECSSTTHHHHHHSSEEEE
T ss_pred             EEEEEeCChhhHHHHHhcCccEE
Confidence            99999999976655555666544

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=97.66  E-value=1.8e-05  Score=62.88  Aligned_cols=92  Identities=7%  Similarity=-0.031  Sum_probs=74.2

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.+. .+.++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++++|.+++++++
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  169 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLT-DSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCch-hhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence            467899999999999 9999999999999999999998876 57888888877655444   466677888999999999


Q ss_pred             EECCCccccCCCCceEe
Q psy17244        156 LDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~  172 (196)
                      |+|+..-.......|+.
T Consensus       170 vGD~~~Di~~a~~aG~~  186 (253)
T 1qq5_A          170 VSSNGFDVGGAKNFGFS  186 (253)
T ss_dssp             EESCHHHHHHHHHHTCE
T ss_pred             EeCChhhHHHHHHCCCE
Confidence            99998544433334443

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.57  E-value=1.6e-05  Score=60.60  Aligned_cols=97  Identities=7%  Similarity=0.014  Sum_probs=77.0

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ...||+.++|+.+. +. .++|.|++...++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.+++++++
T Consensus        86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~  163 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG-EFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVM  163 (200)
T ss_dssp             CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG-GTCSCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence            47899999999997 46 99999999999999999998876 57888887765544433   456677888999999999


Q ss_pred             EECCCccccCCCCceEeeceecC
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      |+|++.-.......|+.+..+..
T Consensus       164 vgD~~~Di~~a~~aG~~~~~~~~  186 (200)
T 3cnh_A          164 VDDRLQNVQAARAVGMHAVQCVD  186 (200)
T ss_dssp             EESCHHHHHHHHHTTCEEEECSC
T ss_pred             eCCCHHHHHHHHHCCCEEEEECC
Confidence            99999876655566766655543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=97.51  E-value=0.00014  Score=59.25  Aligned_cols=124  Identities=16%  Similarity=0.124  Sum_probs=66.1

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCC-CCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITR-PTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME-  106 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~-  106 (196)
                      .+.+.+||||||||+++...-... ...... ...+.--  .    ........||+.++|+.|. +.+.++|.|+.+. 
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~--~----~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~  129 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDW--I----NKAEAEALPGSIDFLKYTESKGVDIYYISNRKTN  129 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHH--H----HHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGG
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHH--H----HcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchh
Confidence            467899999999999984100000 000000 0000000  0    0001356799999999997 6799999999984 


Q ss_pred             --hhHHHHHHHhcCCC-ceeeEEEEecCCCCCCCCcccccccc--CCCCCcEEEEECCCccccCC
Q psy17244        107 --IYGAAVADKLDARR-HILRRRYYRQHCTPELGSYTKDLSAI--SPDLSSIFILDNSPGAYRGF  166 (196)
Q Consensus       107 --~ya~~vl~~ldp~~-~~f~~~l~r~~c~~~~~~~~KdL~~l--~~~~~~~iiIDD~~~~~~~~  166 (196)
                        ..+...++.++... ..+..++..+. .     +.++....  ......+++|.|+..-+...
T Consensus       130 ~~~~~~~~L~~~Gl~~v~~~~vi~~~~~-~-----~K~~~~~~~~~~~~~~~l~VGDs~~Di~aA  188 (258)
T 2i33_A          130 QLDATIKNLERVGAPQATKEHILLQDPK-E-----KGKEKRRELVSQTHDIVLFFGDNLSDFTGF  188 (258)
T ss_dssp             GHHHHHHHHHHHTCSSCSTTTEEEECTT-C-----CSSHHHHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred             HHHHHHHHHHHcCCCcCCCceEEECCCC-C-----CCcHHHHHHHHhCCCceEEeCCCHHHhccc
Confidence              44555566665541 23433333322 1     11111111  11223488999998766544

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.48  E-value=0.00022  Score=51.52  Aligned_cols=62  Identities=27%  Similarity=0.236  Sum_probs=44.2

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh---
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY---  108 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y---  108 (196)
                      +.+++||||||+++....             +      .      -+...|+..+.|+.+. +...++|.|..+...   
T Consensus         2 k~i~~DlDGTL~~~~~~~-------------~------~------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG   56 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSD-------------Y------R------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEG   56 (126)
T ss_dssp             CEEEECSTTTTBCCCCSC-------------G------G------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTT
T ss_pred             CEEEEecCCCCCCCCCCc-------------c------c------cCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhccc
Confidence            478999999999864210             0      0      0234688999999997 689999999876543   


Q ss_pred             ---------HHHHHHHhcCC
Q psy17244        109 ---------GAAVADKLDAR  119 (196)
Q Consensus       109 ---------a~~vl~~ldp~  119 (196)
                               +..+++.+...
T Consensus        57 ~~~~~~~~~~~~i~~~~~~~   76 (126)
T 1xpj_A           57 NVGKINIHTLPIITEWLDKH   76 (126)
T ss_dssp             CHHHHHHHTHHHHHHHHHHT
T ss_pred             cccccCHHHHHHHHHHHHHc
Confidence                     56777766554

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=97.46  E-value=1.8e-05  Score=68.26  Aligned_cols=97  Identities=13%  Similarity=0.062  Sum_probs=74.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceee--EEEEecCC--------------CCCCCCccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILR--RRYYRQHC--------------TPELGSYTK  141 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~--~~l~r~~c--------------~~~~~~~~K  141 (196)
                      +...||+.++|+.|+ +.+.++|.|++...++..+++.++.. .+|+  .+++.+..              ......|.+
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~-~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~  292 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL-PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA  292 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG-GGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh-HhcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence            567899999999998 56999999999999999999999876 5787  67775542              222335666


Q ss_pred             cccccC--------------CCCCcEEEEECCCccccCCCCceEeecee
Q psy17244        142 DLSAIS--------------PDLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       142 dL~~l~--------------~~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      -++.+|              .+++++++|+|++.-.......|+.+..+
T Consensus       293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V  341 (384)
T 1qyi_A          293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGT  341 (384)
T ss_dssp             HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred             HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEE
Confidence            777777              78999999999997665555556554433

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=97.43  E-value=7.7e-05  Score=57.51  Aligned_cols=93  Identities=10%  Similarity=0.125  Sum_probs=71.2

Q ss_pred             eCccHHHHHHHhhh-CceEEEEcCCc---hhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         81 KRPHVDFFLDIVSQ-WYELVVFTASM---EIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        81 ~RP~l~eFL~~l~~-~yei~I~T~~~---~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      ..|++.++|+.+.+ .+.++|.|++.   ..++..+++.++.. .+|+.+++.+.....++   .+.+-++.+|.+++++
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  178 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM-EFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEES  178 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG-GGCSEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGGE
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH-HHhhhheeccccCCCCCCHHHHHHHHHHcCCCccce
Confidence            48999999999984 69999999999   99999999998876 57888887665544332   4556778889999999


Q ss_pred             EEEECCC-ccccCCCCceEeec
Q psy17244        154 FILDNSP-GAYRGFPDNAIPIK  174 (196)
Q Consensus       154 iiIDD~~-~~~~~~~~N~I~v~  174 (196)
                      +.|+|++ .-.......|+.+.
T Consensus       179 ~~iGD~~~nDi~~a~~aG~~~~  200 (235)
T 2om6_A          179 LHIGDTYAEDYQGARKVGMWAV  200 (235)
T ss_dssp             EEEESCTTTTHHHHHHTTSEEE
T ss_pred             EEECCChHHHHHHHHHCCCEEE
Confidence            9999999 54443333444433

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=97.43  E-value=0.00013  Score=56.30  Aligned_cols=93  Identities=14%  Similarity=0.049  Sum_probs=70.2

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC-C---CccccccccC--CCC
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL-G---SYTKDLSAIS--PDL  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~-~---~~~KdL~~l~--~~~  150 (196)
                      +...||+.++|+.+.+  .+.++|.|++...++..+++.++.. .+|....+.+...... .   .+.+-++.+|  .++
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~~  170 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID-HYFPFGAFADDALDRNELPHIALERARRMTGANYSP  170 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS-TTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch-hhcCcceecCCCcCccchHHHHHHHHHHHhCCCCCc
Confidence            5778999999999985  5999999999999999999999876 5777655544432211 0   2344467778  899


Q ss_pred             CcEEEEECCCccccCCCCceEe
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIP  172 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~  172 (196)
                      ++++.|.|++.-.......|+.
T Consensus       171 ~~~i~iGD~~~Di~~a~~aG~~  192 (234)
T 2hcf_A          171 SQIVIIGDTEHDIRCARELDAR  192 (234)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCE
T ss_pred             ccEEEECCCHHHHHHHHHCCCc
Confidence            9999999999766555555644

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=97.32  E-value=0.00017  Score=55.10  Aligned_cols=96  Identities=11%  Similarity=-0.037  Sum_probs=74.5

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ....|++.++|+.+.+ .+.++|.|++...+++.+++.++.. .+|+.+++.+.....++   .+.+-++.+|.++++++
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i  171 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR-DSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  171 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH-hhCcEEEeccccCCCCCChHHHHHHHHHcCCCHHHeE
Confidence            4678999999999985 6999999999999999999998776 57888887776554432   44566778899999999


Q ss_pred             EEECCCccccCCCCceEeece
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~  175 (196)
                      .|.|+..-.......|+.+..
T Consensus       172 ~iGD~~nDi~~a~~aG~~~~~  192 (226)
T 1te2_A          172 ALEDSVNGMIASKAARMRSIV  192 (226)
T ss_dssp             EEESSHHHHHHHHHTTCEEEE
T ss_pred             EEeCCHHHHHHHHHcCCEEEE
Confidence            999999755544444554444

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=97.31  E-value=0.0003  Score=57.48  Aligned_cols=84  Identities=4%  Similarity=0.034  Sum_probs=63.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILD  157 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiID  157 (196)
                      ...+||+.++|+.|. +.+.++|.|++....++.+++.++.. .+|..+.       . ....+-++.++.. +++++|.
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~i~-------~-~~K~~~~~~l~~~-~~~~~vG  231 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-LVIAEVL-------P-HQKSEEVKKLQAK-EVVAFVG  231 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-EEECSCC-------T-TCHHHHHHHHTTT-CCEEEEE
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-eeeeecC-------h-HHHHHHHHHHhcC-CeEEEEE
Confidence            568999999999998 57999999999999999999999875 4554322       1 1224566777888 9999999


Q ss_pred             CCCccccCCCCceEe
Q psy17244        158 NSPGAYRGFPDNAIP  172 (196)
Q Consensus       158 D~~~~~~~~~~N~I~  172 (196)
                      |+..-.......|+.
T Consensus       232 Ds~~Di~~a~~ag~~  246 (287)
T 3a1c_A          232 DGINDAPALAQADLG  246 (287)
T ss_dssp             CTTTCHHHHHHSSEE
T ss_pred             CCHHHHHHHHHCCee
Confidence            998755444444443

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.30  E-value=4.6e-05  Score=59.14  Aligned_cols=93  Identities=4%  Similarity=0.000  Sum_probs=67.9

Q ss_pred             eCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEEEE
Q psy17244         81 KRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        81 ~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~iiI  156 (196)
                      ..||+.++|+.+.+ .+.++|.|++..  +..+++.++.. .+|+.+++.+.+...+   ..+.+-++.+|.++++++.|
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v  169 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAII-DDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI  169 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCT-TTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcH-hhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence            68999999999985 699999999854  88899998876 5788877766654433   25677888899999999999


Q ss_pred             ECCCccccCCCCceEeecee
Q psy17244        157 DNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       157 DD~~~~~~~~~~N~I~v~~f  176 (196)
                      .|++.-.......|+.+...
T Consensus       170 GDs~~Di~~a~~aG~~~~~~  189 (233)
T 3nas_A          170 EDAEAGISAIKSAGMFAVGV  189 (233)
T ss_dssp             ECSHHHHHHHHHTTCEEEEC
T ss_pred             eCCHHHHHHHHHcCCEEEEE
Confidence            99986554444455544443

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=97.28  E-value=8.8e-05  Score=57.26  Aligned_cols=94  Identities=14%  Similarity=-0.009  Sum_probs=71.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---Ccccc---ccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKD---LSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~Kd---L~~l~~~~~~  152 (196)
                      +...|++.++|+.+.+.+.++|.|++....+..+++.+.   .+|+.+++.+.....+.   .|.+-   ++.+|.++++
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~  174 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKD  174 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGGG
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCCchh
Confidence            467899999999999889999999999999999988865   46888888765554433   33333   7888999999


Q ss_pred             EEEEECCC-ccccCCCCceEeece
Q psy17244        153 IFILDNSP-GAYRGFPDNAIPIKS  175 (196)
Q Consensus       153 ~iiIDD~~-~~~~~~~~N~I~v~~  175 (196)
                      ++.|+|++ .-.......|+.+..
T Consensus       175 ~~~vGD~~~~Di~~a~~aG~~~~~  198 (240)
T 3smv_A          175 ILHTAESLYHDHIPANDAGLVSAW  198 (240)
T ss_dssp             EEEEESCTTTTHHHHHHHTCEEEE
T ss_pred             EEEECCCchhhhHHHHHcCCeEEE
Confidence            99999996 555444444444443

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.25  E-value=0.00041  Score=56.68  Aligned_cols=124  Identities=13%  Similarity=0.099  Sum_probs=69.1

Q ss_pred             CCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh-
Q psy17244         31 KRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI-  107 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~-  107 (196)
                      +++.+|||+||||++...... ......+.+...+.--+ ..     -....-||+.+||+.|. ..++++|-|+.+.. 
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv-~~-----g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~  130 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWV-DA-----RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDV  130 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHH-HT-----TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTT
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHH-Hc-----CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccc
Confidence            456999999999999863100 00000000000000000 00     02577899999999997 68999999988664 


Q ss_pred             ---hHHHHHHHhcCCCceee-EEEEecCCCCCCCCccccccccCCCCCcEEEEECCCcccc
Q psy17244        108 ---YGAAVADKLDARRHILR-RRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYR  164 (196)
Q Consensus       108 ---ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~  164 (196)
                         -+...++.++.. ..+. .++.+.... .+....+.|...|  .+-++.|-|+..-+.
T Consensus       131 ~r~~T~~~L~~lGi~-~~~~~~Lilr~~~~-~K~~~r~~L~~~g--y~iv~~iGD~~~Dl~  187 (260)
T 3pct_A          131 EKAGTVDDMKRLGFT-GVNDKTLLLKKDKS-NKSVRFKQVEDMG--YDIVLFVGDNLNDFG  187 (260)
T ss_dssp             SHHHHHHHHHHHTCC-CCSTTTEEEESSCS-SSHHHHHHHHTTT--CEEEEEEESSGGGGC
T ss_pred             cHHHHHHHHHHcCcC-ccccceeEecCCCC-ChHHHHHHHHhcC--CCEEEEECCChHHcC
Confidence               666677777654 2222 355554322 2222223333333  344889999887654

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=97.23  E-value=0.00012  Score=57.71  Aligned_cols=92  Identities=12%  Similarity=0.022  Sum_probs=70.2

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEEC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDN  158 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD  158 (196)
                      +...||+.++|+.+.+.+.++|.|++...++..+++.++.. .+|..+++..  ......+.+-++.+|.++++++.|.|
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~-~~f~~i~~~~--kp~~~~~~~~~~~l~~~~~~~i~iGD  187 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLS-DLFPRIEVVS--EKDPQTYARVLSEFDLPAERFVMIGN  187 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGG-GTCCCEEEES--CCSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcH-HhCceeeeeC--CCCHHHHHHHHHHhCcCchhEEEECC
Confidence            56789999999999988999999999999999999998876 5677666531  12223556677888999999999999


Q ss_pred             CC-ccccCCCCceEee
Q psy17244        159 SP-GAYRGFPDNAIPI  173 (196)
Q Consensus       159 ~~-~~~~~~~~N~I~v  173 (196)
                      ++ .-.......|+.+
T Consensus       188 ~~~~Di~~a~~aG~~~  203 (251)
T 2pke_A          188 SLRSDVEPVLAIGGWG  203 (251)
T ss_dssp             CCCCCCHHHHHTTCEE
T ss_pred             CchhhHHHHHHCCCEE
Confidence            99 6544333344433

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.23  E-value=0.00068  Score=50.70  Aligned_cols=84  Identities=10%  Similarity=-0.009  Sum_probs=66.6

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i  154 (196)
                      ....|++.++|+.+.+ .+.++|.|++...++. +++.++.. .+|+.+++.+.....+   ..+.+-++.+|.++++++
T Consensus        84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~  161 (207)
T 2go7_A           84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVE-SYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  161 (207)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCG-GGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCch-hheeeEEecCcCCCCCCCcHHHHHHHHHhCCCcccEE
Confidence            5678999999999985 6999999999999999 99888766 5788777766544333   234556677899999999


Q ss_pred             EEECCCcccc
Q psy17244        155 ILDNSPGAYR  164 (196)
Q Consensus       155 iIDD~~~~~~  164 (196)
                      .|+|+..-..
T Consensus       162 ~iGD~~nDi~  171 (207)
T 2go7_A          162 YIGDRTLDVE  171 (207)
T ss_dssp             EEESSHHHHH
T ss_pred             EECCCHHHHH
Confidence            9999986444

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.19  E-value=0.00015  Score=55.66  Aligned_cols=94  Identities=15%  Similarity=0.039  Sum_probs=71.6

Q ss_pred             EeeCccHHHHHHHhhh-C-ceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-W-YELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~-yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiI  156 (196)
                      +...|++.++|+.+.+ . +.++|.|++....+..+++.++.. .+|..++...  ......+.+-++.+|.++++++.|
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~-~~f~~~~~~~--kpk~~~~~~~~~~lgi~~~~~i~i  180 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS-PYFDHIEVMS--DKTEKEYLRLLSILQIAPSELLMV  180 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG-GGCSEEEEES--CCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH-hhhheeeecC--CCCHHHHHHHHHHhCCCcceEEEE
Confidence            5678999999999985 5 999999999999999999998876 5777776542  122235667788889999999999


Q ss_pred             ECCC-ccccCCCCceEeece
Q psy17244        157 DNSP-GAYRGFPDNAIPIKS  175 (196)
Q Consensus       157 DD~~-~~~~~~~~N~I~v~~  175 (196)
                      +|++ .-.......|+.+..
T Consensus       181 GD~~~~Di~~a~~aG~~~v~  200 (234)
T 3ddh_A          181 GNSFKSDIQPVLSLGGYGVH  200 (234)
T ss_dssp             ESCCCCCCHHHHHHTCEEEE
T ss_pred             CCCcHHHhHHHHHCCCeEEE
Confidence            9997 555444444444433

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.16  E-value=0.00039  Score=56.88  Aligned_cols=126  Identities=13%  Similarity=0.098  Sum_probs=71.1

Q ss_pred             CCCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      .+++.+|||+||||++....-. ......+.....+.--  .    ..-....-||+.+||+.|. ..++|+|-|+.+..
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~w--v----~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~  129 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRW--V----DARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDS  129 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHH--H----HHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHH--H----HcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            4678999999999999863100 0000000000000000  0    0012577899999999997 68999999988654


Q ss_pred             ----hHHHHHHHhcCCCceee-EEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccC
Q psy17244        108 ----YGAAVADKLDARRHILR-RRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRG  165 (196)
Q Consensus       108 ----ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~  165 (196)
                          -+...++.++.. .+.. .++.++... .+....+.|...|  .+-++.|-|+..-+..
T Consensus       130 ~~r~~T~~~L~~lGi~-~~~~~~Lilr~~~~-~K~~~r~~l~~~G--y~iv~~vGD~~~Dl~~  188 (262)
T 3ocu_A          130 TEKSGTIDDMKRLGFN-GVEESAFYLKKDKS-AKAARFAEIEKQG--YEIVLYVGDNLDDFGN  188 (262)
T ss_dssp             TTHHHHHHHHHHHTCS-CCSGGGEEEESSCS-CCHHHHHHHHHTT--EEEEEEEESSGGGGCS
T ss_pred             chHHHHHHHHHHcCcC-cccccceeccCCCC-ChHHHHHHHHhcC--CCEEEEECCChHHhcc
Confidence                666667777654 1221 455565432 2222223333333  2348899999876643

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.12  E-value=0.00011  Score=55.97  Aligned_cols=112  Identities=10%  Similarity=0.048  Sum_probs=70.3

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      .+-+.||+|+||||......-      .+.  ..           .--.+..|.+.  .|+.|. +.+.++|-|+.  ..
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~------~~~--g~-----------~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~--~~   63 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYV------SGD--QK-----------EIISYDVKDAI--GISLLKKSGIEVRLISER--AC   63 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBC------CSS--CC-----------CEEEEEHHHHH--HHHHHHHTTCEEEEECSS--CC
T ss_pred             hcCcEEEEeCccceECCcEEE------cCC--CC-----------EEEEEecCcHH--HHHHHHHCCCEEEEEeCc--HH
Confidence            466799999999999864210      000  00           11123455553  688887 68999999999  78


Q ss_pred             HHHHHHH--hcCCCceeeEEEEecCCCCCCC-CccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        109 GAAVADK--LDARRHILRRRYYRQHCTPELG-SYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       109 a~~vl~~--ldp~~~~f~~~l~r~~c~~~~~-~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +..+++.  ++..  +|     . .+ ..++ .+.+-++.+|.++++++.|-|+..-.......|+.+
T Consensus        64 ~~~~l~~l~lgi~--~~-----~-g~-~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~  122 (168)
T 3ewi_A           64 SKQTLSALKLDCK--TE-----V-SV-SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSA  122 (168)
T ss_dssp             CHHHHHTTCCCCC--EE-----C-SC-SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEE
T ss_pred             HHHHHHHhCCCcE--EE-----E-CC-CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEE
Confidence            9999984  4432  22     1 12 2222 334556677899999999999997554333333333

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=97.12  E-value=0.00061  Score=53.58  Aligned_cols=93  Identities=11%  Similarity=0.131  Sum_probs=67.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC--------C---CC-Ccc-----
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP--------E---LG-SYT-----  140 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~--------~---~~-~~~-----  140 (196)
                      +..+||+.++|+.|. +.+.++|.|++...+++.+++.|.+   + ..+++.+....        .   .. .+.     
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l~~---~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~  151 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVE---K-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC  151 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSC---G-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSC
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcCCC---C-CeEEeeeeEEcCCceEEecCCCCccccccccCCc
Confidence            678999999999998 6799999999999999999983322   2 44444433221        1   11 122     


Q ss_pred             --ccccccCCCCCcEEEEECCCccccCCCCceEeece
Q psy17244        141 --KDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       141 --KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                        +-++.++.+++++++|+|+..-.......|+.+..
T Consensus       152 K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~  188 (236)
T 2fea_A          152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR  188 (236)
T ss_dssp             HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred             HHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence              56778899999999999998876655566776653

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=97.08  E-value=6.7e-05  Score=61.54  Aligned_cols=122  Identities=13%  Similarity=0.035  Sum_probs=79.9

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH-
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG-  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya-  109 (196)
                      ...+++|+|||+.......       +   .+..         .-......||+.++|+.|+ +.+.++|.|+....++ 
T Consensus       159 ~~~i~iD~dgtl~~~~~~~-------~---~~~~---------~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~  219 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRG-------P---YDLE---------KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKE  219 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCC-------T---TCGG---------GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSS
T ss_pred             cceEEEeCCCCcccccCCC-------c---hhhh---------hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccch
Confidence            4578899999987654221       0   0000         0011456899999999998 6799999999998776 


Q ss_pred             --HHHHHH--------hcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCc-EEEEECCCccccCCCCceEeece
Q psy17244        110 --AAVADK--------LDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS-IFILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       110 --~~vl~~--------ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~-~iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                        ..+++.        ++.   .|..++.++... .+.   .+.+-++.++.++.+ +++|+|++.-......+|+.+..
T Consensus       220 ~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~-~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~  295 (301)
T 1ltq_A          220 DPTKYYRMTRKWVEDIAGV---PLVMQCQREQGD-TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQ  295 (301)
T ss_dssp             STTHHHHHHHHHHHHTTCC---CCSEEEECCTTC-CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEE
T ss_pred             hHHHHHHhcccccccccCC---CchheeeccCCC-CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEE
Confidence              455665        444   366777665532 222   234445666666544 68899999877766677776554


Q ss_pred             e
Q psy17244        176 W  176 (196)
Q Consensus       176 f  176 (196)
                      .
T Consensus       296 v  296 (301)
T 1ltq_A          296 V  296 (301)
T ss_dssp             C
T ss_pred             e
Confidence            3

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=97.06  E-value=6.4e-05  Score=58.69  Aligned_cols=96  Identities=6%  Similarity=-0.024  Sum_probs=73.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...|++.++|+.+.+.+.++|.|++....+..+++.++..   |+.+++.+.+...++   .+.+-++.+|.++++++.
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~  191 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---WDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVML  191 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---CSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---eeEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence            45689999999999866999999999999999999998763   666555554433332   456678888999999999


Q ss_pred             EECCCccccCCCCceEeeceec
Q psy17244        156 LDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      |+|+..-.......|+.+..+.
T Consensus       192 iGD~~~Di~~a~~aG~~~~~~~  213 (254)
T 3umg_A          192 AAAHNGDLEAAHATGLATAFIL  213 (254)
T ss_dssp             EESCHHHHHHHHHTTCEEEEEC
T ss_pred             EeCChHhHHHHHHCCCEEEEEe
Confidence            9999875555555555555443

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.05  E-value=0.00021  Score=53.53  Aligned_cols=93  Identities=8%  Similarity=-0.094  Sum_probs=70.1

Q ss_pred             eCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEEE
Q psy17244         81 KRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        81 ~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~iiI  156 (196)
                      ..|++.++|+.+.+ .+.++|.|++. .++..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.+  +++.|
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~i  158 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIA-AYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLVI  158 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCG-GGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEEE
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCH-hheeeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEEE
Confidence            78999999999984 69999999876 5788999988776 57888877666544332   445566777877  99999


Q ss_pred             ECCCccccCCCCceEeeceec
Q psy17244        157 DNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       157 DD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +|++.-.......|+.+..+.
T Consensus       159 GD~~~Di~~a~~aG~~~~~~~  179 (190)
T 2fi1_A          159 GDRPIDIEAGQAAGLDTHLFT  179 (190)
T ss_dssp             ESSHHHHHHHHHTTCEEEECS
T ss_pred             cCCHHHHHHHHHcCCeEEEEC
Confidence            999876655555666554443

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=97.02  E-value=0.00011  Score=59.43  Aligned_cols=94  Identities=11%  Similarity=0.066  Sum_probs=69.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHh--c---------CCCceeeEEEEecCCCC--CCCCccccccc
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKL--D---------ARRHILRRRYYRQHCTP--ELGSYTKDLSA  145 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~l--d---------p~~~~f~~~l~r~~c~~--~~~~~~KdL~~  145 (196)
                      +...||+.++|+.   .+.++|.|+++...++.+++..  +         .. .+|...+....+..  +...|.+-+++
T Consensus       124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~-~~~~~~f~~~~~g~KP~p~~~~~a~~~  199 (253)
T 2g80_A          124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN-SYIDGYFDINTSGKKTETQSYANILRD  199 (253)
T ss_dssp             BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG-GGCCEEECHHHHCCTTCHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH-hhcceEEeeeccCCCCCHHHHHHHHHH
Confidence            4678999999999   8999999999999999999876  2         22 34554443221121  22367788899


Q ss_pred             cCCCCCcEEEEECCCccccCCCCceEeecee
Q psy17244        146 ISPDLSSIFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       146 l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      +|.+++++|+|+|++.-.......|+.+..+
T Consensus       200 lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v  230 (253)
T 2g80_A          200 IGAKASEVLFLSDNPLELDAAAGVGIATGLA  230 (253)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred             cCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence            9999999999999997666555666665544

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=96.98  E-value=0.00022  Score=54.46  Aligned_cols=95  Identities=11%  Similarity=0.064  Sum_probs=71.2

Q ss_pred             EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ....|++.++|+.+.+ .+.++|.|++  ..+..+++.++.. .+|+.+++.+.+...++   .+.+-++.+|.++++++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i  166 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLT-GYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCG-GGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChH-HHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeE
Confidence            3567999999999984 6999999998  6778888888765 57887777666554443   45567788899999999


Q ss_pred             EEECCCccccCCCCceEeecee
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      .|+|++.-.......|+.+...
T Consensus       167 ~iGD~~nDi~~a~~aG~~~~~~  188 (221)
T 2wf7_A          167 GLEDSQAGIQAIKDSGALPIGV  188 (221)
T ss_dssp             EEESSHHHHHHHHHHTCEEEEE
T ss_pred             EEeCCHHHHHHHHHCCCEEEEE
Confidence            9999986554444445544443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=96.94  E-value=0.00014  Score=59.00  Aligned_cols=92  Identities=10%  Similarity=-0.019  Sum_probs=54.6

Q ss_pred             eCccHHHHHHHhhh--CceEEEEcCC---------------------chhhHHHHHHHhcCCCceeeEE----------E
Q psy17244         81 KRPHVDFFLDIVSQ--WYELVVFTAS---------------------MEIYGAAVADKLDARRHILRRR----------Y  127 (196)
Q Consensus        81 ~RP~l~eFL~~l~~--~yei~I~T~~---------------------~~~ya~~vl~~ldp~~~~f~~~----------l  127 (196)
                      .+|++.+.|+.+.+  .+.+.+.|+.                     ....+..+++..+.. ..|...          .
T Consensus       123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVS-VNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEE-EEEEECCGGGTCCTTEE
T ss_pred             CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCC-EEEEEccccccCCCCce
Confidence            46899999999974  5566787766                     344555555555433 222211          2


Q ss_pred             EecCCCCC--CC-CccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        128 YRQHCTPE--LG-SYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       128 ~r~~c~~~--~~-~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      +.+.....  ++ ...+-++.+|.++++++.|-|+..-.......|+.+
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~  250 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGY  250 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEE
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEE
Confidence            22211111  11 234556677899999999999998665544455443

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=96.93  E-value=0.0013  Score=52.83  Aligned_cols=57  Identities=18%  Similarity=0.142  Sum_probs=38.5

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.++|||||||+++..                               ..-|...+.|+++. +...+++.|.-+..-+.
T Consensus         5 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~   53 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN-------------------------------ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQ   53 (279)
T ss_dssp             CCEEEECC------------------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred             eEEEEEcCcCCCCCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            46899999999998752                               23466778888886 68999999999988899


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.++..
T Consensus        54 ~~~~~l~~~   62 (279)
T 3mpo_A           54 PYLDAMDID   62 (279)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHcCCC
Confidence            999888754

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=96.90  E-value=0.0011  Score=52.10  Aligned_cols=56  Identities=11%  Similarity=0.105  Sum_probs=42.4

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+++..                               ...|...+.|+++. +...+++.|..+...+..
T Consensus         4 kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~   52 (231)
T 1wr8_A            4 KAISIDIDGTITYPNR-------------------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEA   52 (231)
T ss_dssp             CEEEEESTTTTBCTTS-------------------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHH
T ss_pred             eEEEEECCCCCCCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHH
Confidence            5899999999998641                               12466777788876 678888888888888888


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        53 ~~~~l~~~   60 (231)
T 1wr8_A           53 ASILIGTS   60 (231)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHcCCC
Confidence            88777653

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=96.84  E-value=0.00015  Score=56.87  Aligned_cols=93  Identities=6%  Similarity=-0.075  Sum_probs=64.8

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEEC
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDN  158 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD  158 (196)
                      +...||+.++|+.|.+...++|.|++...++..+++.++.. .+|......   ...+..+.+.+.. +.+++++++|+|
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~-~~f~~~~~~---~~~K~~~~~~~~~-~~~~~~~~~vgD  169 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLW-DEVEGRVLI---YIHKELMLDQVME-CYPARHYVMVDD  169 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHH-HHTTTCEEE---ESSGGGCHHHHHH-HSCCSEEEEECS
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcH-HhcCeeEEe---cCChHHHHHHHHh-cCCCceEEEEcC
Confidence            46789999999999854499999999999999999998765 455443321   1222334444444 678999999999


Q ss_pred             CCc---cccCCCCceEeecee
Q psy17244        159 SPG---AYRGFPDNAIPIKSW  176 (196)
Q Consensus       159 ~~~---~~~~~~~N~I~v~~f  176 (196)
                      ++.   ........|+.+..+
T Consensus       170 s~~d~~di~~A~~aG~~~i~v  190 (231)
T 2p11_A          170 KLRILAAMKKAWGARLTTVFP  190 (231)
T ss_dssp             CHHHHHHHHHHHGGGEEEEEE
T ss_pred             ccchhhhhHHHHHcCCeEEEe
Confidence            986   443344456654433

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=96.83  E-value=0.0014  Score=53.17  Aligned_cols=59  Identities=25%  Similarity=0.277  Sum_probs=45.3

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      ...+.+++||||||+++..                               ..-|...+.|+++. +...++|.|.-+..-
T Consensus        19 ~~~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~   67 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDH-------------------------------FLTPYAKETLKLLTARGINFVFATGRHYID   67 (285)
T ss_dssp             --CCEEEEECCCCCSCTTS-------------------------------CCCHHHHHHHHHHHTTTCEEEEECSSCGGG
T ss_pred             CcceEEEEeCcCCCCCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            4668899999999998642                               12456777888886 678999999888888


Q ss_pred             HHHHHHHhcCC
Q psy17244        109 GAAVADKLDAR  119 (196)
Q Consensus       109 a~~vl~~ldp~  119 (196)
                      +..+++.++..
T Consensus        68 ~~~~~~~l~~~   78 (285)
T 3pgv_A           68 VGQIRDNLGIR   78 (285)
T ss_dssp             GHHHHHHHCSC
T ss_pred             HHHHHHhcCCC
Confidence            88888888765

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=96.82  E-value=0.0011  Score=53.10  Aligned_cols=45  Identities=18%  Similarity=0.250  Sum_probs=35.9

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI  107 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~  107 (196)
                      ..+.++|||||||+++.                               -.. |+..++|+.+. +...+++.|+.+.+
T Consensus         4 ~~kli~~DlDGTLl~~~-------------------------------~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr   49 (264)
T 3epr_A            4 AYKGYLIDLDGTIYKGK-------------------------------SRI-PAGERFIERLQEKGIPYMLVTNNTTR   49 (264)
T ss_dssp             CCCEEEECCBTTTEETT-------------------------------EEC-HHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred             CCCEEEEeCCCceEeCC-------------------------------EEC-cCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence            35789999999999874                               123 89999999997 78999999964433

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=96.81  E-value=0.0009  Score=52.89  Aligned_cols=56  Identities=9%  Similarity=0.024  Sum_probs=47.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+.+..                               ...|...+.|+++. +...++|.|..+...+..
T Consensus         6 kli~~DlDGTLl~~~~-------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~   54 (227)
T 1l6r_A            6 RLAAIDVDGNLTDRDR-------------------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYA   54 (227)
T ss_dssp             CEEEEEHHHHSBCTTS-------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred             EEEEEECCCCCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHH
Confidence            6899999999997521                               24678899999997 679999999999999999


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        55 ~~~~l~~~   62 (227)
T 1l6r_A           55 LKIFLGIN   62 (227)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHhCCC
Confidence            99988754

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=96.78  E-value=0.0013  Score=52.70  Aligned_cols=57  Identities=28%  Similarity=0.222  Sum_probs=45.8

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.++|||||||+++..                               ..-|...+.|+++. +...+++.|.-+..-+
T Consensus         4 ~~kli~fDlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~   52 (279)
T 4dw8_A            4 KYKLIVLDLDGTLTNSKK-------------------------------EISSRNRETLIRIQEQGIRLVLASGRPTYGI   52 (279)
T ss_dssp             CCCEEEECCCCCCSCTTS-------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             cceEEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence            357899999999998742                               12466778888886 6899999999998888


Q ss_pred             HHHHHHhcC
Q psy17244        110 AAVADKLDA  118 (196)
Q Consensus       110 ~~vl~~ldp  118 (196)
                      ..+++.++.
T Consensus        53 ~~~~~~l~~   61 (279)
T 4dw8_A           53 VPLANELRM   61 (279)
T ss_dssp             HHHHHHTTG
T ss_pred             HHHHHHhCC
Confidence            999888764

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=96.65  E-value=0.00035  Score=53.68  Aligned_cols=92  Identities=10%  Similarity=0.128  Sum_probs=70.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCcee-eEEEEecCCCCC--C---CCccccccccCCCCCc
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHIL-RRRYYRQHCTPE--L---GSYTKDLSAISPDLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f-~~~l~r~~c~~~--~---~~~~KdL~~l~~~~~~  152 (196)
                      +...|++.++|+.+..  .++|.|++...++..+++.++.. .+| +.+++.+.+...  +   ..+.+-++.+|.++++
T Consensus        86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~-~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~  162 (229)
T 2fdr_A           86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLK-PYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR  162 (229)
T ss_dssp             CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCG-GGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred             CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChH-HhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence            4678999999999876  99999999999999999998776 577 777776653322  2   2456677888999999


Q ss_pred             EEEEECCCccccCCCCceEee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      ++.|+|+..-.......|+.+
T Consensus       163 ~i~iGD~~~Di~~a~~aG~~~  183 (229)
T 2fdr_A          163 VVVVEDSVHGIHGARAAGMRV  183 (229)
T ss_dssp             EEEEESSHHHHHHHHHTTCEE
T ss_pred             eEEEcCCHHHHHHHHHCCCEE
Confidence            999999997554444445443

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.62  E-value=0.0017  Score=52.30  Aligned_cols=58  Identities=16%  Similarity=0.188  Sum_probs=37.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.++|||||||+++...                               .-|...+.|+++. +...+++.|.-+..-+
T Consensus         5 ~~kli~fDlDGTLl~~~~~-------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~~   53 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSNGK-------------------------------IHQATKDAIEYVKKKGIYVTLVTNRHFRSA   53 (290)
T ss_dssp             -CCEEEECCCCCCSCTTSC-------------------------------CCHHHHHHHHHHHHTTCEEEEBCSSCHHHH
T ss_pred             cceEEEEcCCCCCCCCCCc-------------------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHH
Confidence            3578999999999987421                               1244555666654 5667777666666666


Q ss_pred             HHHHHHhcCC
Q psy17244        110 AAVADKLDAR  119 (196)
Q Consensus       110 ~~vl~~ldp~  119 (196)
                      ..+++.++..
T Consensus        54 ~~~~~~~~~~   63 (290)
T 3dnp_A           54 QKIAKSLKLD   63 (290)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHcCCC
Confidence            6666666543

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=96.62  E-value=0.002  Score=52.18  Aligned_cols=59  Identities=15%  Similarity=0.064  Sum_probs=40.4

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      ...+.+++||||||+++...                              ..-|...+.|+++. +...+++.|.-+..-
T Consensus        19 ~~~kli~~DlDGTLl~~~~~------------------------------~i~~~~~~al~~l~~~G~~v~iaTGR~~~~   68 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGSL------------------------------LIDPEYMSVIDRLIDKGIIFVVCSGRQFSS   68 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTCS------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             cCceEEEEeCcCCCCCCCCC------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            46678999999999976421                              12355666676665 567777777777776


Q ss_pred             HHHHHHHhcC
Q psy17244        109 GAAVADKLDA  118 (196)
Q Consensus       109 a~~vl~~ldp  118 (196)
                      +..+++.+..
T Consensus        69 ~~~~~~~l~~   78 (283)
T 3dao_A           69 EFKLFAPIKH   78 (283)
T ss_dssp             HHHHTGGGGG
T ss_pred             HHHHHHHcCC
Confidence            7766666654

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.59  E-value=0.0036  Score=50.64  Aligned_cols=58  Identities=16%  Similarity=0.157  Sum_probs=45.7

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +.+.+++||||||+++...                               .-|...+.|+++. +...++|-|.-+...+
T Consensus         8 ~~~li~~DlDGTLl~~~~~-------------------------------~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~   56 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHSY-------------------------------DWQPAAPWLTRLREANVPVILCSSKTSAEM   56 (275)
T ss_dssp             CCEEEEEECTTTTSCSSCC-------------------------------SCCTTHHHHHHHHHTTCCEEEECSSCHHHH
T ss_pred             CceEEEEeCCCCCCCCCCc-------------------------------CCHHHHHHHHHHHHCCCeEEEEcCCCHHHH
Confidence            4578999999999975310                               1244678899887 6799999999999999


Q ss_pred             HHHHHHhcCC
Q psy17244        110 AAVADKLDAR  119 (196)
Q Consensus       110 ~~vl~~ldp~  119 (196)
                      ..+++.++..
T Consensus        57 ~~~~~~l~~~   66 (275)
T 1xvi_A           57 LYLQKTLGLQ   66 (275)
T ss_dssp             HHHHHHTTCT
T ss_pred             HHHHHHcCCC
Confidence            9999988654

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=96.59  E-value=0.0024  Score=50.90  Aligned_cols=43  Identities=12%  Similarity=0.090  Sum_probs=34.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM  105 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~  105 (196)
                      ..+.++|||||||+++..                                .-|+..+.|+.+. +...+++.|..+
T Consensus         7 ~~kli~~DlDGTLl~~~~--------------------------------~~~~~~~ai~~l~~~Gi~v~l~Tgr~   50 (268)
T 3qgm_A            7 DKKGYIIDIDGVIGKSVT--------------------------------PIPEGVEGVKKLKELGKKIIFVSNNS   50 (268)
T ss_dssp             CCSEEEEECBTTTEETTE--------------------------------ECHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             cCCEEEEcCcCcEECCCE--------------------------------eCcCHHHHHHHHHHcCCeEEEEeCcC
Confidence            357899999999997531                                2378999999997 789999999943

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.58  E-value=0.0028  Score=51.45  Aligned_cols=57  Identities=25%  Similarity=0.281  Sum_probs=42.1

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++||||||+++..                               ...|...+.++.+. ++..+++.|..+...+.
T Consensus         4 ikli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~   52 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSKH-------------------------------QVSLENENALRQAQRDGIEVVVSTGRAHFDVM   52 (288)
T ss_dssp             CCEEEEECCCCCSCTTS-------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred             eEEEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence            35899999999998742                               12355667777776 57888888888888888


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.++..
T Consensus        53 ~~~~~l~~~   61 (288)
T 1nrw_A           53 SIFEPLGIK   61 (288)
T ss_dssp             HHHGGGTCC
T ss_pred             HHHHHcCCC
Confidence            887776543

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=96.51  E-value=0.0029  Score=50.54  Aligned_cols=51  Identities=14%  Similarity=0.225  Sum_probs=38.6

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++|+||||++..                               ... |+..++|+.+. +...+++.|+.+..-...
T Consensus         2 k~i~~D~DGtL~~~~-------------------------------~~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~   49 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGN-------------------------------RAI-PGVRELIEFLKERGIPFAFLTNNSTKTPEM   49 (263)
T ss_dssp             EEEEEECBTTTEETT-------------------------------EEC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHH
T ss_pred             eEEEEeCcCceEeCC-------------------------------EeC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence            579999999999742                               123 78999999997 689999999877554455


Q ss_pred             HHHH
Q psy17244        112 VADK  115 (196)
Q Consensus       112 vl~~  115 (196)
                      +.+.
T Consensus        50 ~~~~   53 (263)
T 1zjj_A           50 YREK   53 (263)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5444

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.50  E-value=0.0021  Score=51.11  Aligned_cols=16  Identities=38%  Similarity=0.779  Sum_probs=13.8

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.+++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            3689999999999875

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=96.39  E-value=0.0012  Score=54.97  Aligned_cols=95  Identities=2%  Similarity=0.020  Sum_probs=71.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC----------C--C-CCcccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP----------E--L-GSYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~----------~--~-~~~~KdL~  144 (196)
                      +..+||+.++|+.|. ..+.++|.|++...+++.+++.++.. .+|...+.......          .  + ..+.+-++
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~-~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~  255 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD-YAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ  255 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC-eEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence            568999999999998 57999999999999999999999886 57766553322211          1  1 13455667


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      .+|.++++++.|.|+..-.......|+.+.
T Consensus       256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va  285 (335)
T 3n28_A          256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVA  285 (335)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             HcCCChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence            789999999999999976655555555544

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.33  E-value=0.0044  Score=49.32  Aligned_cols=54  Identities=15%  Similarity=0.236  Sum_probs=42.4

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+ +..  .                           +   +...+.|+.+. +...++|.|..+...+..
T Consensus         3 kli~~DlDGTLl-~~~--~---------------------------~---~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~   49 (249)
T 2zos_A            3 RLIFLDIDKTLI-PGY--E---------------------------P---DPAKPIIEELKDMGFEIIFNSSKTRAEQEY   49 (249)
T ss_dssp             EEEEECCSTTTC-TTS--C---------------------------S---GGGHHHHHHHHHTTEEEEEBCSSCHHHHHH
T ss_pred             cEEEEeCCCCcc-CCC--C---------------------------c---HHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence            589999999999 321  0                           1   22678888886 689999999999989999


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        50 ~~~~~~~~   57 (249)
T 2zos_A           50 YRKELEVE   57 (249)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHcCCC
Confidence            99988754

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=96.31  E-value=0.0034  Score=50.84  Aligned_cols=57  Identities=19%  Similarity=0.191  Sum_probs=45.1

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.+++||||||+.+..                               ..-|...+.|+++. +...++|.|.-+...+.
T Consensus         5 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~   53 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPDH-------------------------------TISPAVKNAIAAARARGVNVVLTTGRPYAGVH   53 (282)
T ss_dssp             CCEEEECCCCCCSCTTS-------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTH
T ss_pred             ceEEEEeCCCCCCCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            46899999999997631                               12456778888887 67999999999888888


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.++..
T Consensus        54 ~~~~~l~l~   62 (282)
T 1rkq_A           54 NYLKELHME   62 (282)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHhCCC
Confidence            998888654

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=96.30  E-value=0.0018  Score=51.53  Aligned_cols=16  Identities=44%  Similarity=0.592  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++|||||||+++.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            4689999999999885

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=96.24  E-value=0.0073  Score=51.20  Aligned_cols=55  Identities=16%  Similarity=0.240  Sum_probs=44.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc----
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM----  105 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~----  105 (196)
                      +++.++||+||||++...                                .=||+.++|+.|. ....+++.|+++    
T Consensus        12 ~~~~~l~D~DGvl~~g~~--------------------------------~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~   59 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRGKK--------------------------------PIAGASDALKLLNRNKIPYILLTNGGGFSE   59 (352)
T ss_dssp             CCEEEEECCBTTTEETTE--------------------------------ECTTHHHHHHHHHHTTCCEEEECSCCSSCH
T ss_pred             cCCEEEEECCCeeEcCCe--------------------------------eCcCHHHHHHHHHHCCCEEEEEeCCCCCCc
Confidence            578999999999997531                                1299999999998 689999999876    


Q ss_pred             hhhHHHHHHHhc
Q psy17244        106 EIYGAAVADKLD  117 (196)
Q Consensus       106 ~~ya~~vl~~ld  117 (196)
                      ..+++.+.+.++
T Consensus        60 ~~~~~~l~~~lg   71 (352)
T 3kc2_A           60 RARTEFISSKLD   71 (352)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             hHHHHHHHHhcC
Confidence            567777765554

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=96.19  E-value=0.0041  Score=49.07  Aligned_cols=92  Identities=5%  Similarity=-0.084  Sum_probs=68.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee-eEEEEecCCCCCCC---CccccccccCCCC-Cc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL-RRRYYRQHCTPELG---SYTKDLSAISPDL-SS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f-~~~l~r~~c~~~~~---~~~KdL~~l~~~~-~~  152 (196)
                      ....||+.++|+.+. ..+.++|.|++....+..+++.++.. .+| +.+++.+.+...++   .+.+-++.+|.++ ++
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~  180 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ-GYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  180 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT-TCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-ccChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence            456799999999998 56999999999999999999988665 343 55555555433322   4456677889998 99


Q ss_pred             EEEEECCCccccCCCCceE
Q psy17244        153 IFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++.|.|+..-.......|+
T Consensus       181 ~i~iGD~~nDi~~a~~aG~  199 (267)
T 1swv_A          181 MIKVGDTVSDMKEGRNAGM  199 (267)
T ss_dssp             EEEEESSHHHHHHHHHTTS
T ss_pred             EEEEeCCHHHHHHHHHCCC
Confidence            9999999965544444443

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.19  E-value=0.0052  Score=49.30  Aligned_cols=56  Identities=23%  Similarity=0.234  Sum_probs=40.7

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~v  112 (196)
                      +.+++||||||+++..                               ..-|...+.|++..+...++|.|.-+...+..+
T Consensus         3 kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~~~~Gi~v~iaTGR~~~~~~~~   51 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDNL-------------------------------EISEKDRRNIEKLSRKCYVVFASGRMLVSTLNV   51 (268)
T ss_dssp             CEEEEECCCCCSCTTS-------------------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHH
T ss_pred             cEEEEeCCCcCCCCCC-------------------------------ccCHHHHHHHHHHhCCCEEEEECCCChHHHHHH
Confidence            5799999999998631                               113456667777225788888888888888888


Q ss_pred             HHHhcCC
Q psy17244        113 ADKLDAR  119 (196)
Q Consensus       113 l~~ldp~  119 (196)
                      ++.++..
T Consensus        52 ~~~l~~~   58 (268)
T 1nf2_A           52 EKKYFKR   58 (268)
T ss_dssp             HHHHSSS
T ss_pred             HHHhCCC
Confidence            8877654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=96.10  E-value=0.0026  Score=50.71  Aligned_cols=43  Identities=19%  Similarity=0.194  Sum_probs=33.5

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM  105 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~  105 (196)
                      ..+.++|||||||+++..                                .-|+..+.|+.+. +...+++.|..+
T Consensus         5 ~~kli~~DlDGTLl~~~~--------------------------------~~~~~~~ai~~l~~~Gi~v~laTgrs   48 (266)
T 3pdw_A            5 TYKGYLIDLDGTMYNGTE--------------------------------KIEEACEFVRTLKDRGVPYLFVTNNS   48 (266)
T ss_dssp             CCSEEEEECSSSTTCHHH--------------------------------HHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred             cCCEEEEeCcCceEeCCE--------------------------------eCccHHHHHHHHHHCCCeEEEEeCCC
Confidence            356899999999997631                                1367889999987 688999998843

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=96.10  E-value=0.0059  Score=48.56  Aligned_cols=42  Identities=26%  Similarity=0.403  Sum_probs=32.6

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS  104 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~  104 (196)
                      +.++++|||||||+++..                              +  -|+..+.++.+. +...+++.|+.
T Consensus        16 ~~~~v~~DlDGTLl~~~~------------------------------~--~~~~~~~l~~l~~~G~~~~~aTn~   58 (271)
T 1vjr_A           16 KIELFILDMDGTFYLDDS------------------------------L--LPGSLEFLETLKEKNKRFVFFTNN   58 (271)
T ss_dssp             GCCEEEECCBTTTEETTE------------------------------E--CTTHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEcCcCcEEeCCE------------------------------E--CcCHHHHHHHHHHcCCeEEEEECC
Confidence            557899999999998621                              2  377888888887 57888888854

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=96.08  E-value=0.0067  Score=48.83  Aligned_cols=56  Identities=20%  Similarity=0.125  Sum_probs=40.3

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC---ch
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS---ME  106 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~---~~  106 (196)
                      ..+.++||+||||++...                              +  -|+..++|+.+. +...+++.|+.   +.
T Consensus        13 ~~k~i~~D~DGtL~~~~~------------------------------~--~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~   60 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYNG------------------------------L--LPGIENTFDYLKAQGQDYYIVTNDASRSP   60 (284)
T ss_dssp             GCSEEEECSBTTTEETTE------------------------------E--CTTHHHHHHHHHHTTCEEEEEECCCSSCH
T ss_pred             cCCEEEEcCcCCcCcCCe------------------------------e--ChhHHHHHHHHHHCCCEEEEEeCCCCcCH
Confidence            456899999999997531                              2  388999999997 78999999973   33


Q ss_pred             hhHHHHHHHhcC
Q psy17244        107 IYGAAVADKLDA  118 (196)
Q Consensus       107 ~ya~~vl~~ldp  118 (196)
                      ......++.++.
T Consensus        61 ~~~~~~l~~lg~   72 (284)
T 2hx1_A           61 EQLADSYHKLGL   72 (284)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHCCc
Confidence            344444555543

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=96.03  E-value=0.0089  Score=46.85  Aligned_cols=33  Identities=6%  Similarity=0.121  Sum_probs=22.3

Q ss_pred             ccccccccCCCCCcEEEEECCC-ccccCCCCceE
Q psy17244        139 YTKDLSAISPDLSSIFILDNSP-GAYRGFPDNAI  171 (196)
Q Consensus       139 ~~KdL~~l~~~~~~~iiIDD~~-~~~~~~~~N~I  171 (196)
                      +.+-++++|.+++++++|.|++ .-.......|+
T Consensus       185 ~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~  218 (259)
T 2ho4_A          185 FLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGM  218 (259)
T ss_dssp             HHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred             HHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCC
Confidence            3345577788999999999998 54443333333

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=96.02  E-value=0.007  Score=47.99  Aligned_cols=49  Identities=16%  Similarity=0.186  Sum_probs=35.0

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+.++||+||||+++..                               .. |++.++++.+. ....+++.|+....-..
T Consensus         5 ~k~v~fDlDGTL~~~~~-------------------------------~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~   52 (264)
T 1yv9_A            5 YQGYLIDLDGTIYLGKE-------------------------------PI-PAGKRFVERLQEKDLPFLFVTNNTTKSPE   52 (264)
T ss_dssp             CCEEEECCBTTTEETTE-------------------------------EC-HHHHHHHHHHHHTTCCEEEEECCCSSCHH
T ss_pred             CCEEEEeCCCeEEeCCE-------------------------------EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHH
Confidence            56899999999998641                               12 67888888886 67888888876544333


Q ss_pred             HH
Q psy17244        111 AV  112 (196)
Q Consensus       111 ~v  112 (196)
                      .+
T Consensus        53 ~~   54 (264)
T 1yv9_A           53 TV   54 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=95.00  E-value=0.0011  Score=53.55  Aligned_cols=86  Identities=6%  Similarity=0.162  Sum_probs=67.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILD  157 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiID  157 (196)
                      ...+||+.++|+.|. +.+.++|.|++....++.+++.++.. .+|..++        ...+..-++.++..++++++|.
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-~~f~~~~--------p~~k~~~~~~l~~~~~~~~~VG  205 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-EYYSNLS--------PEDKVRIIEKLKQNGNKVLMIG  205 (263)
Confidence            358999999999998 56999999999999999999999876 4665544        1233556777888889999999


Q ss_pred             CCCccccCCCCceEee
Q psy17244        158 NSPGAYRGFPDNAIPI  173 (196)
Q Consensus       158 D~~~~~~~~~~N~I~v  173 (196)
                      |+..-.......|+.+
T Consensus       206 D~~~D~~aa~~Agv~v  221 (263)
T 2yj3_A          206 DGVNDAAALALADVSV  221 (263)
Confidence            9987665555555544

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.00  E-value=0.0055  Score=50.36  Aligned_cols=55  Identities=16%  Similarity=0.125  Sum_probs=44.1

Q ss_pred             CeEEEEeCCCceeee-ecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         32 RKVLVLDLDETLIHS-HHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      .+.+++||||||+.+ ..                               ..-|...+.|+++. ++..++|.|.-+...+
T Consensus        27 ikli~~DlDGTLl~~~~~-------------------------------~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~   75 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKDI-------------------------------KVPSENIDAIKEAIEKGYMVSICTGRSKVGI   75 (301)
T ss_dssp             CCEEEEETBTTTBCCTTT-------------------------------CSCHHHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred             ccEEEEECCCCCcCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            478999999999986 31                               12366778888887 6899999999998888


Q ss_pred             HHHH--HHhc
Q psy17244        110 AAVA--DKLD  117 (196)
Q Consensus       110 ~~vl--~~ld  117 (196)
                      ..++  +.++
T Consensus        76 ~~~~~~~~l~   85 (301)
T 2b30_A           76 LSAFGEENLK   85 (301)
T ss_dssp             HHHHCHHHHH
T ss_pred             HHHhhHHhhc
Confidence            8888  7765

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=95.88  E-value=0.0039  Score=50.98  Aligned_cols=56  Identities=16%  Similarity=0.093  Sum_probs=36.0

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCcc-HHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPH-VDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~-l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      .+.++|||||||+++...                               .-|. ..+.|+++. +...+++.|.-+...+
T Consensus        37 iKli~fDlDGTLld~~~~-------------------------------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~   85 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSKGS-------------------------------YDHNRFQRILKQLQERDIRFVVASSNPYRQL   85 (304)
T ss_dssp             CSEEEECCCCCCSCTTSC-------------------------------CCHHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             eEEEEEeCCCCCCCCCCc-------------------------------cCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            578999999999987421                               1233 455566664 5667777766666666


Q ss_pred             HHHHHHhcC
Q psy17244        110 AAVADKLDA  118 (196)
Q Consensus       110 ~~vl~~ldp  118 (196)
                      ..+++.++.
T Consensus        86 ~~~~~~l~~   94 (304)
T 3l7y_A           86 REHFPDCHE   94 (304)
T ss_dssp             HTTCTTTGG
T ss_pred             HHHHHHhCC
Confidence            655555543

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=95.86  E-value=0.012  Score=46.00  Aligned_cols=30  Identities=17%  Similarity=0.273  Sum_probs=20.4

Q ss_pred             cccccCCCCCcEEEEECCC-ccccCCCCceE
Q psy17244        142 DLSAISPDLSSIFILDNSP-GAYRGFPDNAI  171 (196)
Q Consensus       142 dL~~l~~~~~~~iiIDD~~-~~~~~~~~N~I  171 (196)
                      -++.+|.++++++.|.|+. .-.......|+
T Consensus       199 ~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~  229 (271)
T 2x4d_A          199 ALQAIGVEAHQAVMIGDDIVGDVGGAQRCGM  229 (271)
T ss_dssp             HHHHHTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred             HHHHhCCCcceEEEECCCcHHHHHHHHHCCC
Confidence            3455678999999999998 54443333344

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=95.79  E-value=0.01  Score=45.64  Aligned_cols=16  Identities=31%  Similarity=0.575  Sum_probs=13.8

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         3 ~k~i~fDlDGTLl~~~   18 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN   18 (250)
T ss_dssp             CCEEEEECBTTTEETT
T ss_pred             ccEEEEcCcceEEeCC
Confidence            3689999999999875

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=95.72  E-value=0.0057  Score=49.12  Aligned_cols=55  Identities=16%  Similarity=0.117  Sum_probs=36.2

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCcc-HHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPH-VDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~-l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      .+.+++||||||+++...                               .-|. +.+.|+++. +...++|-|.-+..-+
T Consensus         3 ~kli~~DlDGTLl~~~~~-------------------------------i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~   51 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDAKT-------------------------------YNQPRFMAQYQELKKRGIKFVVASGNQYYQL   51 (271)
T ss_dssp             CCEEEECCCCCCSCTTSC-------------------------------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred             ccEEEEeCCCCCCCCCCc-------------------------------CCHHHHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            368999999999986321                               1233 356666665 4677777777776666


Q ss_pred             HHHHHHhc
Q psy17244        110 AAVADKLD  117 (196)
Q Consensus       110 ~~vl~~ld  117 (196)
                      ..+++.+.
T Consensus        52 ~~~~~~l~   59 (271)
T 1rlm_A           52 ISFFPELK   59 (271)
T ss_dssp             GGGCTTTT
T ss_pred             HHHHHhcC
Confidence            65555543

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=95.61  E-value=0.011  Score=47.31  Aligned_cols=51  Identities=16%  Similarity=0.116  Sum_probs=38.1

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ..+.+++||||||+++..                               ..-|...+.|+++. +...++|-|..+....
T Consensus         3 ~~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~   51 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPRL-------------------------------CQTDEMRALIKRARGAGFCVGTVGGSDFAKQ   51 (246)
T ss_dssp             CSEEEEECSBTTTBSTTS-------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             CceEEEEeCcCCcCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence            357899999999997642                               12467788899987 5789999998877644


Q ss_pred             HHH
Q psy17244        110 AAV  112 (196)
Q Consensus       110 ~~v  112 (196)
                      ...
T Consensus        52 ~~~   54 (246)
T 3f9r_A           52 VEQ   54 (246)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            333

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=95.59  E-value=0.014  Score=47.58  Aligned_cols=42  Identities=12%  Similarity=0.184  Sum_probs=33.5

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS  104 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~  104 (196)
                      ..+.++||+||||+...                                ..-|+..++|+.+. +...+++.|+.
T Consensus        20 ~~k~i~~D~DGTL~~~~--------------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~   62 (306)
T 2oyc_A           20 RAQGVLFDCDGVLWNGE--------------------------------RAVPGAPELLERLARAGKAALFVSNN   62 (306)
T ss_dssp             HCSEEEECSBTTTEETT--------------------------------EECTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             hCCEEEECCCCcEecCC--------------------------------ccCcCHHHHHHHHHHCCCeEEEEECC
Confidence            45689999999999642                                12378999999997 68999999963

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=95.56  E-value=0.011  Score=47.41  Aligned_cols=53  Identities=23%  Similarity=0.222  Sum_probs=37.2

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      ..+.+++||||||+++..                               ..-|...+.|+++.+...++|-|.-+...+.
T Consensus        12 ~~kli~~DlDGTLl~~~~-------------------------------~is~~~~~al~~l~~~i~v~iaTGR~~~~~~   60 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPARQ-------------------------------KIDPEVAAFLQKLRSRVQIGVVGGSDYCKIA   60 (262)
T ss_dssp             -CEEEEEESBTTTBSTTS-------------------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHH
T ss_pred             CeEEEEEeCccCCCCCCC-------------------------------cCCHHHHHHHHHHHhCCEEEEEcCCCHHHHH
Confidence            568899999999997531                               1246788889998744888888876655444


Q ss_pred             HHHH
Q psy17244        111 AVAD  114 (196)
Q Consensus       111 ~vl~  114 (196)
                      ..+.
T Consensus        61 ~~l~   64 (262)
T 2fue_A           61 EQLG   64 (262)
T ss_dssp             HHHS
T ss_pred             HHHh
Confidence            4443

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=95.56  E-value=0.0024  Score=50.94  Aligned_cols=54  Identities=17%  Similarity=0.111  Sum_probs=37.4

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+++...                              ..-|...+.|+.+. ++..+++.|..+ ..+..
T Consensus         3 kli~~DlDGTLl~~~~~------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~   51 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETH------------------------------RIPSSTIEALEAAHAKGLKIFIATGRP-KAIIN   51 (261)
T ss_dssp             CEEEECSBTTTBCTTTS------------------------------SCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCC
T ss_pred             cEEEEeCCCCCcCCCCC------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHH
Confidence            58999999999987421                              12355667777776 567888877776 66655


Q ss_pred             HHHHhc
Q psy17244        112 VADKLD  117 (196)
Q Consensus       112 vl~~ld  117 (196)
                      +++.++
T Consensus        52 ~~~~l~   57 (261)
T 2rbk_A           52 NLSELQ   57 (261)
T ss_dssp             SCHHHH
T ss_pred             HHHHhC
Confidence            555554

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=95.43  E-value=0.0084  Score=47.55  Aligned_cols=54  Identities=17%  Similarity=0.198  Sum_probs=38.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~v  112 (196)
                      ..+++||||||+++...                             +   +...+.|+++.+...++|-|.-+...+..+
T Consensus         4 ~li~~DlDGTLl~~~~~-----------------------------~---~~~~~~l~~~~~gi~v~iaTGR~~~~~~~~   51 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQA-----------------------------L---EHLQEYLGDRRGNFYLAYATGRSYHSAREL   51 (244)
T ss_dssp             EEEEECTBTTTBSCHHH-----------------------------H---HHHHHHHHTTGGGEEEEEECSSCHHHHHHH
T ss_pred             eEEEEeCCCCCcCCHHH-----------------------------H---HHHHHHHHHhcCCCEEEEEcCCCHHHHHHH
Confidence            37899999999975310                             1   345566666666778888888887778888


Q ss_pred             HHHhcC
Q psy17244        113 ADKLDA  118 (196)
Q Consensus       113 l~~ldp  118 (196)
                      ++.++.
T Consensus        52 ~~~l~l   57 (244)
T 1s2o_A           52 QKQVGL   57 (244)
T ss_dssp             HHHHTC
T ss_pred             HHHcCC
Confidence            877543

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.40  E-value=0.016  Score=45.80  Aligned_cols=46  Identities=22%  Similarity=0.186  Sum_probs=33.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchh
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEI  107 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~  107 (196)
                      +++.+++||||||+.+..                               ..-|...+.|+++.+...++|-|.-+..
T Consensus         5 ~~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~i~v~iaTGR~~~   50 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPRQ-------------------------------KITKEMDDFLQKLRQKIKIGVVGGSDFE   50 (246)
T ss_dssp             CSEEEEEESBTTTBCTTS-------------------------------CCCHHHHHHHHHHTTTSEEEEECSSCHH
T ss_pred             CceEEEEECCCCcCCCCc-------------------------------ccCHHHHHHHHHHHhCCeEEEEcCCCHH
Confidence            578999999999997531                               1246677888888744777777766543

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.18  E-value=0.011  Score=46.79  Aligned_cols=57  Identities=11%  Similarity=0.026  Sum_probs=41.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++||||||+.....+.        .                  -..-|...+.|+++. +. .++|-|.-+...+..
T Consensus         2 kli~~DlDGTLl~~~~~~~--------~------------------~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~   54 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMNPE--------E------------------SYADAGLLSLISDLKERF-DTYIVTGRSPEEISR   54 (239)
T ss_dssp             CEEEEECBTTTBCCCSCGG--------G------------------CCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHH
T ss_pred             eEEEEecCCCCcCCCCCcc--------c------------------CCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHH
Confidence            4789999999998531100        0                  123577889999997 67 888999888887777


Q ss_pred             HHHHh
Q psy17244        112 VADKL  116 (196)
Q Consensus       112 vl~~l  116 (196)
                      +++.+
T Consensus        55 ~~~~l   59 (239)
T 1u02_A           55 FLPLD   59 (239)
T ss_dssp             HSCSS
T ss_pred             Hhccc
Confidence            77655

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=94.92  E-value=0.012  Score=46.75  Aligned_cols=15  Identities=53%  Similarity=0.682  Sum_probs=13.3

Q ss_pred             CeEEEEeCCCceeee
Q psy17244         32 RKVLVLDLDETLIHS   46 (196)
Q Consensus        32 k~~LVLDLD~TLv~s   46 (196)
                      .+.++|||||||+++
T Consensus        12 iKli~~DlDGTLl~~   26 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCEEEECSBTTTBCT
T ss_pred             eEEEEEeCCCCCcCC
Confidence            578999999999984

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=93.60  E-value=0.045  Score=43.39  Aligned_cols=45  Identities=20%  Similarity=0.118  Sum_probs=32.8

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .+++||||||+++. .                               .-|...+-|+++. +...+++.|.-+..-+.
T Consensus         2 li~~DlDGTLl~~~-~-------------------------------i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~   47 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-G-------------------------------ELGPAREALERLRALGVPVVPVTAKTRKEVE   47 (259)
T ss_dssp             EEEECCCCCCSCSS-S-------------------------------SCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH
T ss_pred             EEEEeCCCCCcCCC-c-------------------------------CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH
Confidence            68999999999774 1                               1355667788886 67888887776665554

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=93.00  E-value=0.028  Score=43.50  Aligned_cols=18  Identities=33%  Similarity=0.615  Sum_probs=15.2

Q ss_pred             CCeEEEEeCCCceeeeec
Q psy17244         31 KRKVLVLDLDETLIHSHH   48 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~   48 (196)
                      ..+.++||+||||+++..
T Consensus        10 ~~k~viFDlDGTL~ds~~   27 (231)
T 2p11_A           10 HDIVFLFDCDNTLLDNDH   27 (231)
T ss_dssp             CSEEEEECCBTTTBCHHH
T ss_pred             CCeEEEEcCCCCCEecHH
Confidence            456899999999999853

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=92.89  E-value=0.035  Score=42.34  Aligned_cols=17  Identities=35%  Similarity=0.493  Sum_probs=14.5

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      .+.++||+||||+++..
T Consensus         4 ~k~viFDlDGTL~d~~~   20 (210)
T 2ah5_A            4 ITAIFFDLDGTLVDSSI   20 (210)
T ss_dssp             CCEEEECSBTTTEECHH
T ss_pred             CCEEEEcCCCcCccCHH
Confidence            46899999999999853

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=92.70  E-value=0.043  Score=41.82  Aligned_cols=17  Identities=29%  Similarity=0.642  Sum_probs=14.6

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      .+.++|||||||+++..
T Consensus         4 ~k~iifDlDGTL~d~~~   20 (234)
T 2hcf_A            4 RTLVLFDIDGTLLKVES   20 (234)
T ss_dssp             CEEEEECCBTTTEEECT
T ss_pred             ceEEEEcCCCCcccCcc
Confidence            46899999999999863

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=92.30  E-value=0.046  Score=41.16  Aligned_cols=17  Identities=35%  Similarity=0.550  Sum_probs=14.6

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      .+.++||+||||+++..
T Consensus         5 ~k~iiFDlDGTL~d~~~   21 (211)
T 2i6x_A            5 IRNIVFDLGGVLIHLNR   21 (211)
T ss_dssp             CSEEEECSBTTTEEECH
T ss_pred             ceEEEEeCCCeeEecch
Confidence            46899999999999863

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=92.28  E-value=0.035  Score=41.03  Aligned_cols=16  Identities=25%  Similarity=0.308  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         6 ~k~i~fDlDGTL~d~~   21 (190)
T 2fi1_A            6 YHDYIWDLGGTLLDNY   21 (190)
T ss_dssp             CSEEEECTBTTTBCHH
T ss_pred             ccEEEEeCCCCcCCCH
Confidence            4689999999999975

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=92.26  E-value=0.041  Score=42.75  Aligned_cols=17  Identities=24%  Similarity=0.507  Sum_probs=14.4

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      .+.++|||||||+++..
T Consensus         4 ~k~viFDlDGTL~ds~~   20 (240)
T 2hi0_A            4 YKAAIFDMDGTILDTSA   20 (240)
T ss_dssp             CSEEEECSBTTTEECHH
T ss_pred             ccEEEEecCCCCccCHH
Confidence            35899999999999853

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=92.00  E-value=0.048  Score=40.29  Aligned_cols=16  Identities=38%  Similarity=0.617  Sum_probs=13.9

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         4 ~k~i~fDlDGTL~~~~   19 (207)
T 2go7_A            4 KTAFIWDLDGTLLDSY   19 (207)
T ss_dssp             CCEEEECTBTTTEECH
T ss_pred             ccEEEEeCCCcccccH
Confidence            3689999999999875

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=91.97  E-value=0.047  Score=41.10  Aligned_cols=16  Identities=38%  Similarity=0.611  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         4 ~k~iifDlDGTL~d~~   19 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQ   19 (209)
T ss_dssp             CSEEEECSBTTTEECH
T ss_pred             ccEEEEcCCCCCcCCH
Confidence            3589999999999985

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=91.83  E-value=0.05  Score=40.69  Aligned_cols=16  Identities=25%  Similarity=0.358  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         4 ~k~viFDlDGTL~d~~   19 (200)
T 3cnh_A            4 IKALFWDIGGVLLTNG   19 (200)
T ss_dssp             CCEEEECCBTTTBCCS
T ss_pred             ceEEEEeCCCeeECCC
Confidence            4689999999999875

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=91.81  E-value=0.044  Score=42.68  Aligned_cols=16  Identities=31%  Similarity=0.356  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++|||||||+++.
T Consensus        13 ~k~iifDlDGTL~d~~   28 (251)
T 2pke_A           13 IQLVGFDGDDTLWKSE   28 (251)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             eeEEEEeCCCCCccCc
Confidence            4689999999999975

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=91.81  E-value=0.069  Score=40.85  Aligned_cols=17  Identities=24%  Similarity=0.384  Sum_probs=14.6

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      .+.++||+||||+++..
T Consensus         3 ~k~viFDlDGTL~d~~~   19 (220)
T 2zg6_A            3 YKAVLVDFGNTLVGFKP   19 (220)
T ss_dssp             CCEEEECSBTTTEEEEE
T ss_pred             ceEEEEcCCCceecccc
Confidence            45899999999999874

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=91.54  E-value=0.04  Score=41.52  Aligned_cols=15  Identities=27%  Similarity=0.552  Sum_probs=13.4

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +.++|||||||+++.
T Consensus         3 k~i~fDlDGTL~d~~   17 (221)
T 2wf7_A            3 KAVLFDLDGVITDTA   17 (221)
T ss_dssp             CEEEECCBTTTBTHH
T ss_pred             cEEEECCCCcccCCh
Confidence            589999999999875

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=91.28  E-value=0.051  Score=41.52  Aligned_cols=15  Identities=27%  Similarity=0.581  Sum_probs=13.5

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +.++|||||||+++.
T Consensus         3 k~i~fDlDGTL~d~~   17 (233)
T 3nas_A            3 KAVIFDLDGVITDTA   17 (233)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEECCCCCcCCCH
Confidence            589999999999984

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=91.26  E-value=0.055  Score=40.70  Aligned_cols=16  Identities=31%  Similarity=0.430  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         9 ~k~i~fDlDGTL~~~~   24 (226)
T 1te2_A            9 ILAAIFDMDGLLIDSE   24 (226)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             CCEEEECCCCCcCcCH
Confidence            4689999999999875

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=91.24  E-value=0.055  Score=41.05  Aligned_cols=16  Identities=25%  Similarity=0.505  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         4 ik~i~fDlDGTL~d~~   19 (229)
T 2fdr_A            4 FDLIIFDCDGVLVDSE   19 (229)
T ss_dssp             CSEEEECSBTTTBCCH
T ss_pred             ccEEEEcCCCCcCccH
Confidence            4689999999999875

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=91.21  E-value=0.065  Score=40.44  Aligned_cols=16  Identities=38%  Similarity=0.538  Sum_probs=14.3

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         8 ik~i~fDlDGTL~~~~   23 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNE   23 (234)
T ss_dssp             CCEEEECCBTTTBCCH
T ss_pred             ccEEEEeCCCCCccCc
Confidence            4789999999999986

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=91.13  E-value=0.051  Score=41.26  Aligned_cols=16  Identities=25%  Similarity=0.372  Sum_probs=13.8

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         4 ~k~i~fDlDGTL~d~~   19 (235)
T 2om6_A            4 VKLVTFDVWNTLLDLN   19 (235)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCCCCCcc
Confidence            3689999999999875

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=91.05  E-value=0.061  Score=42.72  Aligned_cols=19  Identities=32%  Similarity=0.543  Sum_probs=15.9

Q ss_pred             CCCeEEEEeCCCceeeeec
Q psy17244         30 VKRKVLVLDLDETLIHSHH   48 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~   48 (196)
                      ...+.++||+||||+++..
T Consensus        16 ~~~k~viFDlDGTLvds~~   34 (260)
T 2gfh_A           16 SRVRAVFFDLDNTLIDTAG   34 (260)
T ss_dssp             CCCCEEEECCBTTTBCHHH
T ss_pred             ccceEEEEcCCCCCCCCHH
Confidence            4567899999999999863

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=90.97  E-value=0.054  Score=41.89  Aligned_cols=15  Identities=47%  Similarity=0.864  Sum_probs=13.5

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +.++|||||||+++.
T Consensus         3 k~iiFDlDGTL~d~~   17 (241)
T 2hoq_A            3 KVIFFDLDDTLVDTS   17 (241)
T ss_dssp             CEEEECSBTTTBCHH
T ss_pred             cEEEEcCCCCCCCCh
Confidence            589999999999985

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=90.80  E-value=0.063  Score=40.88  Aligned_cols=17  Identities=24%  Similarity=0.632  Sum_probs=14.5

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      ..+.++||+||||+++.
T Consensus         6 ~~k~i~fDlDGTL~d~~   22 (238)
T 3ed5_A            6 RYRTLLFDVDDTILDFQ   22 (238)
T ss_dssp             CCCEEEECCBTTTBCHH
T ss_pred             cCCEEEEcCcCcCcCCc
Confidence            45789999999999874

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=90.61  E-value=0.068  Score=41.85  Aligned_cols=16  Identities=6%  Similarity=0.108  Sum_probs=13.9

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++|||||||+++.
T Consensus         6 ik~i~fDlDGTLld~~   21 (267)
T 1swv_A            6 IEAVIFAWAGTTVDYG   21 (267)
T ss_dssp             CCEEEECSBTTTBSTT
T ss_pred             ceEEEEecCCCEEeCC
Confidence            4689999999999874

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=90.60  E-value=0.067  Score=40.69  Aligned_cols=15  Identities=20%  Similarity=0.166  Sum_probs=13.6

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +.++||+||||+++.
T Consensus         3 k~i~fDlDGTL~d~~   17 (234)
T 3u26_A            3 RAVFFDSLGTLNSVE   17 (234)
T ss_dssp             CEEEECSTTTTBCHH
T ss_pred             cEEEEcCCCcccccc
Confidence            589999999999886

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=90.32  E-value=0.065  Score=40.70  Aligned_cols=16  Identities=38%  Similarity=0.287  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus         6 ~k~i~fD~DGTL~d~~   21 (240)
T 3smv_A            6 FKALTFDCYGTLIDWE   21 (240)
T ss_dssp             CSEEEECCBTTTBCHH
T ss_pred             ceEEEEeCCCcCcCCc
Confidence            4689999999999885

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=90.11  E-value=0.099  Score=40.08  Aligned_cols=16  Identities=38%  Similarity=0.474  Sum_probs=14.1

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++||+||||+++.
T Consensus        28 ik~viFD~DGTL~d~~   43 (229)
T 4dcc_A           28 IKNLLIDLGGVLINLD   43 (229)
T ss_dssp             CCEEEECSBTTTBCBC
T ss_pred             CCEEEEeCCCeEEeCC
Confidence            4789999999999975

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=89.87  E-value=0.076  Score=40.76  Aligned_cols=17  Identities=12%  Similarity=0.206  Sum_probs=14.7

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      ..+.++||+||||+++.
T Consensus        14 ~~k~i~fDlDGTL~d~~   30 (254)
T 3umg_A           14 NVRAVLFDTFGTVVDWR   30 (254)
T ss_dssp             BCCEEEECCBTTTBCHH
T ss_pred             CceEEEEeCCCceecCc
Confidence            45789999999999874

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=89.86  E-value=0.078  Score=41.41  Aligned_cols=15  Identities=33%  Similarity=0.412  Sum_probs=13.3

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      +.++||+||||+++.
T Consensus         3 k~viFDlDGTL~d~~   17 (253)
T 1qq5_A            3 KAVVFDAYGTLFDVQ   17 (253)
T ss_dssp             CEEEECTBTTTBCTT
T ss_pred             cEEEEeCCCCCCccH
Confidence            589999999999875

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=89.57  E-value=0.0061  Score=48.32  Aligned_cols=90  Identities=4%  Similarity=-0.053  Sum_probs=54.5

Q ss_pred             eCccHHHHHHHhhhCceEEEEcCCchhh--HHHH-HHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         81 KRPHVDFFLDIVSQWYELVVFTASMEIY--GAAV-ADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        81 ~RP~l~eFL~~l~~~yei~I~T~~~~~y--a~~v-l~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ..|++.++|+.|.+.+.+ |.|++...+  +..+ .+..... .+|...+..+.....++   .+..-++++|.++++++
T Consensus       127 ~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l~-~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~  204 (264)
T 1yv9_A          127 SYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSVV-TFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVI  204 (264)
T ss_dssp             CHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHH-HHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEE
T ss_pred             CHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHHH-HHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHHEE
Confidence            569999999999988887 889987744  2210 0000000 12322222232222332   56677888999999999


Q ss_pred             EEECCC-ccccCCCCceEe
Q psy17244        155 ILDNSP-GAYRGFPDNAIP  172 (196)
Q Consensus       155 iIDD~~-~~~~~~~~N~I~  172 (196)
                      +|.|++ .-.......|+.
T Consensus       205 ~vGD~~~~Di~~a~~aG~~  223 (264)
T 1yv9_A          205 MVGDNYETDIQSGIQNGID  223 (264)
T ss_dssp             EEESCTTTHHHHHHHHTCE
T ss_pred             EECCCcHHHHHHHHHcCCc
Confidence            999995 544444444544

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=89.44  E-value=0.094  Score=39.86  Aligned_cols=17  Identities=41%  Similarity=0.477  Sum_probs=14.5

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      ..+.++||+||||+++.
T Consensus         4 ~~k~i~fDlDGTL~d~~   20 (240)
T 3qnm_A            4 KYKNLFFDLDDTIWAFS   20 (240)
T ss_dssp             CCSEEEECCBTTTBCHH
T ss_pred             CceEEEEcCCCCCcCch
Confidence            35689999999999875

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=89.20  E-value=0.012  Score=46.06  Aligned_cols=27  Identities=7%  Similarity=0.058  Sum_probs=21.4

Q ss_pred             eCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244         81 KRPHVDFFLDIVSQWYELVVFTASMEIY  108 (196)
Q Consensus        81 ~RP~l~eFL~~l~~~yei~I~T~~~~~y  108 (196)
                      ..|++.++|+.+.+.+.+ |.|+....+
T Consensus       123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~  149 (259)
T 2ho4_A          123 HYQLLNQAFRLLLDGAPL-IAIHKARYY  149 (259)
T ss_dssp             BHHHHHHHHHHHHTTCCE-EESCCCSEE
T ss_pred             CHHHHHHHHHHHHCCCEE-EEECCCCcC
Confidence            457899999999878888 888876543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=89.14  E-value=0.093  Score=41.99  Aligned_cols=16  Identities=19%  Similarity=0.285  Sum_probs=14.2

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      -+.++||+||||+++.
T Consensus        31 ikaviFDlDGTLvDs~   46 (253)
T 2g80_A           31 YSTYLLDIEGTVCPIS   46 (253)
T ss_dssp             CSEEEECCBTTTBCTH
T ss_pred             CcEEEEcCCCCccccc
Confidence            4689999999999984

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=88.96  E-value=0.14  Score=40.35  Aligned_cols=15  Identities=27%  Similarity=0.576  Sum_probs=13.4

Q ss_pred             eEEEEeCCCceeeee
Q psy17244         33 KVLVLDLDETLIHSH   47 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~   47 (196)
                      ++++||+||||+++.
T Consensus         2 k~iiFDlDGTL~d~~   16 (263)
T 3k1z_A            2 RLLTWDVKDTLLRLR   16 (263)
T ss_dssp             CEEEECCBTTTEEES
T ss_pred             cEEEEcCCCceeCCC
Confidence            589999999999975

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=88.73  E-value=0.13  Score=39.85  Aligned_cols=15  Identities=20%  Similarity=0.479  Sum_probs=13.0

Q ss_pred             CeEEEEeCCCceeee
Q psy17244         32 RKVLVLDLDETLIHS   46 (196)
Q Consensus        32 k~~LVLDLD~TLv~s   46 (196)
                      .+.+|||+||||+++
T Consensus         6 ~k~viFD~DGTL~d~   20 (236)
T 2fea_A            6 KPFIICDFDGTITMN   20 (236)
T ss_dssp             CEEEEECCTTTTBSS
T ss_pred             CcEEEEeCCCCCCcc
Confidence            468999999999955

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=88.62  E-value=0.16  Score=38.14  Aligned_cols=14  Identities=29%  Similarity=0.570  Sum_probs=12.4

Q ss_pred             eEEEEeCCCceeee
Q psy17244         33 KVLVLDLDETLIHS   46 (196)
Q Consensus        33 ~~LVLDLD~TLv~s   46 (196)
                      +.++||+||||++.
T Consensus         3 k~viFD~DGTL~d~   16 (206)
T 1rku_A            3 EIACLDLEGVLVPE   16 (206)
T ss_dssp             EEEEEESBTTTBCC
T ss_pred             cEEEEccCCcchhh
Confidence            57999999999983

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=88.49  E-value=0.14  Score=42.33  Aligned_cols=39  Identities=15%  Similarity=0.197  Sum_probs=33.4

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhc
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLD  117 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ld  117 (196)
                      +..+|++.++|+.+.+.+.+.|+|+....|+..+.+.+.
T Consensus       102 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~~~  140 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIG  140 (332)
T ss_dssp             CCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchhhh
Confidence            366899999999998778899999998899988877764

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=87.22  E-value=0.14  Score=40.71  Aligned_cols=16  Identities=25%  Similarity=0.343  Sum_probs=14.0

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      .+.++|||||||+++.
T Consensus        10 ikaviFDlDGTL~ds~   25 (261)
T 1yns_A           10 VTVILLDIEGTTTPIA   25 (261)
T ss_dssp             CCEEEECCBTTTBCHH
T ss_pred             CCEEEEecCCCccchh
Confidence            4689999999999874

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=84.30  E-value=0.33  Score=39.06  Aligned_cols=17  Identities=18%  Similarity=0.262  Sum_probs=14.5

Q ss_pred             CeEEEEeCCCceeeeec
Q psy17244         32 RKVLVLDLDETLIHSHH   48 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~   48 (196)
                      -++++||+||||+++..
T Consensus        32 i~~viFD~dGTL~ds~~   48 (287)
T 3a1c_A           32 VTAVIFDKTGTLTKGKP   48 (287)
T ss_dssp             CCEEEEECCCCCBCSCC
T ss_pred             CCEEEEeCCCCCcCCCE
Confidence            35899999999999863

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=83.85  E-value=0.79  Score=36.96  Aligned_cols=97  Identities=15%  Similarity=0.121  Sum_probs=63.4

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC---ceeeEEEEecCCCCCC-------CCccc-----
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR---HILRRRYYRQHCTPEL-------GSYTK-----  141 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~---~~f~~~l~r~~c~~~~-------~~~~K-----  141 (196)
                      .+.+|||+.++++.|. ....++|.|.+....++++++.+....   ..++..+..+......       ..+.|     
T Consensus       139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~  218 (297)
T 4fe3_A          139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  218 (297)
T ss_dssp             CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence            3789999999999998 679999999999999999999987542   2344333322211110       01111     


Q ss_pred             ---cccccCCCCCcEEEEECCCccccC-----CCCceEeec
Q psy17244        142 ---DLSAISPDLSSIFILDNSPGAYRG-----FPDNAIPIK  174 (196)
Q Consensus       142 ---dL~~l~~~~~~~iiIDD~~~~~~~-----~~~N~I~v~  174 (196)
                         ....+....++|++|=|...-...     +.++||.+.
T Consensus       219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG  259 (297)
T 4fe3_A          219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG  259 (297)
T ss_dssp             TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred             HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence               111223456789999888765433     557777654

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=81.88  E-value=1.1  Score=38.16  Aligned_cols=40  Identities=10%  Similarity=-0.044  Sum_probs=36.8

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLD  117 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ld  117 (196)
                      .+.++|++.+.++.|. ..++++|.|+|....++++++.++
T Consensus       219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg  259 (385)
T 4gxt_A          219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTN  259 (385)
T ss_dssp             CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTT
T ss_pred             CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhC
Confidence            3568999999999998 789999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	3e-49

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (394), Expect = 3e-49
 Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 15/185 (8%)

Query: 12  VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTID 71
           ++Y +               +  +V+DLDETL+HS        + KP    DF++ V ID
Sbjct: 1   MQYLLPEAKAQDS------DKICVVIDLDETLVHS--------SFKPVNNADFIIPVEID 46

Query: 72  RHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH 131
               + +V KRPHVD FL  + + +E V+FTAS+  Y   VAD LD +    R R +R+ 
Sbjct: 47  GVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRES 105

Query: 132 CTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPV 191
           C    G+Y KDLS +  DL  + ILDNSP +Y   PDNA+P+ SWF + SDT L  LLP 
Sbjct: 106 CVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPF 165

Query: 192 LDALR 196
            + L 
Sbjct: 166 FEQLS 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	100.0
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.31
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.04
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.02
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.01
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	98.94
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.93
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.93
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	98.75
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	98.73
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	98.66
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	98.64
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	98.57
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	98.56
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.5
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.43
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	98.41
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	98.36
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	98.34
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.31
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.3
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	98.24
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.23
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.96
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.85
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.81
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	97.67
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.64
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.55
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.53
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	97.34
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	97.15
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	97.03
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	96.95
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	96.9
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	96.84
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	96.82
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	96.7
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	96.69
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	96.6
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	96.53
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	96.42
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	96.27
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	96.15
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	96.1
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	95.84
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	95.74
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	95.63
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	95.02
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	95.0
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	93.63
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	88.06
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	87.02
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	86.9
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	85.68
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	85.49
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	85.16
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	83.22
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	82.45
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	80.77

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-47  Score=295.13  Aligned_cols=158  Identities=45%  Similarity=0.751  Sum_probs=148.4

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG  109 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya  109 (196)
                      .+|+|||||||||||||...        +....++.+.+..++....++|++|||+++||++++++|||+|||+|++.||
T Consensus        13 ~~k~~LVLDLDeTLihs~~~--------~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA   84 (181)
T d1ta0a_          13 SDKICVVIDLDETLVHSSFK--------PVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYA   84 (181)
T ss_dssp             TTSCEEEECCBTTTEEEESS--------CCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHH
T ss_pred             CCCeEEEEeCCCCEEccccC--------CCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHHH
Confidence            48899999999999999853        4556788888888888889999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhhH
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALL  189 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l~  189 (196)
                      ++|++.|||. +.|.++++|++|....+.+.|||+.+|+++++||||||++.+|..||+|||+|++|.|+++|++|..|+
T Consensus        85 ~~il~~ldp~-~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I~I~~f~~~~~D~eL~~l~  163 (181)
T d1ta0a_          85 DPVADLLDKW-GAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLL  163 (181)
T ss_dssp             HHHHHHHCSS-CCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBCCCCCCSSCTTCCHHHHHH
T ss_pred             HHHHHHhccC-CceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCChhhhhcCccCeeEecCcCCCCCcHHHHHHH
Confidence            9999999998 577899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy17244        190 PVLDALR  196 (196)
Q Consensus       190 ~~L~~Lr  196 (196)
                      ++|++|.
T Consensus       164 ~~L~~l~  170 (181)
T d1ta0a_         164 PFFEQLS  170 (181)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9999874

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=6.2e-13  Score=99.67  Aligned_cols=150  Identities=13%  Similarity=0.061  Sum_probs=98.7

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc-hhhH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM-EIYG  109 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~-~~ya  109 (196)
                      +|++||||||||+++.......+.....  ....+.     +.....+.+.||+.++|+.|. +.+.++|.|++. ..++
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~~~--~~~~~~-----d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~   77 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFHKS--SDGTVR-----DRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGA   77 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEEEC--TTSCEE-----ETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHH
T ss_pred             CCEEEEcCCCcccCCccccccCccHhHH--hcchHh-----hhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhh
Confidence            5789999999999875432211110000  000000     112334789999999999998 679999999775 4678


Q ss_pred             HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHh-h
Q psy17244        110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA-L  188 (196)
Q Consensus       110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~-l  188 (196)
                      ..+++.+... .+|..+....  ......+.+-++.+|.+++++|+|||++.........|+.+.......+..++.+ +
T Consensus        78 ~~~l~~~~~~-~~~~~~~~~~--kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~~~~~~~~l  154 (164)
T d1u7pa_          78 NQLLELFDLG-KYFIQREIYP--GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGL  154 (164)
T ss_dssp             HHHHHHTTCG-GGCSEEEESS--SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCCHHHHHHHH
T ss_pred             ccchhccccc-ccceeeeccc--CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCChHHHHHHH
Confidence            8888888876 4666554321  1122356677888999999999999999887777777887665554334444443 4


Q ss_pred             HHH
Q psy17244        189 LPV  191 (196)
Q Consensus       189 ~~~  191 (196)
                      ..|
T Consensus       155 ~~f  157 (164)
T d1u7pa_         155 ETF  157 (164)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=4.5e-11  Score=91.85  Aligned_cols=97  Identities=12%  Similarity=-0.042  Sum_probs=80.2

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +...||+.++|+.|+ +.+.++|.|++.+..++.+++.++.. .+|+.+++.+.....++   .|.+-++++|.++++++
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~-~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l  165 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR-DSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV  165 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred             ccccchHHHHHHHhhhcccccccccccccccccccccccccc-ccccccccccccccchhhHHHHHHHHHHcCCCchhcE
Confidence            345799999999997 67999999999999999999999987 69999998876554433   57888899999999999


Q ss_pred             EEECCCccccCCCCceEeecee
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      +|+|++.-.......|+.+..+
T Consensus       166 ~igD~~~di~aA~~~G~~~i~v  187 (218)
T d1te2a_         166 ALEDSVNGMIASKAARMRSIVV  187 (218)
T ss_dssp             EEESSHHHHHHHHHTTCEEEEC
T ss_pred             EEeeCHHHHHHHHHcCCEEEEE
Confidence            9999997665555556655444

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.02  E-value=3e-11  Score=92.47  Aligned_cols=94  Identities=5%  Similarity=-0.008  Sum_probs=78.1

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      +...||+.++|+.+++.+.++|-|++....+..+++.++.. .+|..+++.+.....++   .+..-++++|.+++++|+
T Consensus        81 ~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  159 (207)
T d2hdoa1          81 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFM-MRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALF  159 (207)
T ss_dssp             CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGG-GGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred             cccccchhhhhhhhccccccccccccccccccccccccccc-ccccccccccccccchhhhhhhcccccceeeeccceeE
Confidence            56789999999999988999999999999999999999887 68988888776665443   567788889999999999


Q ss_pred             EECCCccccCCCCceEee
Q psy17244        156 LDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v  173 (196)
                      |+|++.-.......|+.+
T Consensus       160 VgDs~~Di~~a~~aG~~~  177 (207)
T d2hdoa1         160 IGDSVSDEQTAQAANVDF  177 (207)
T ss_dssp             EESSHHHHHHHHHHTCEE
T ss_pred             ecCCHHHHHHHHHcCCeE
Confidence            999987665544455543

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.01  E-value=6.9e-11  Score=90.11  Aligned_cols=96  Identities=9%  Similarity=0.013  Sum_probs=75.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i  154 (196)
                      +.+.||+.++|+.|+ +.+.++|.|++.. .+..+++.++.. .+|+.+++.+.....+   ..+..-++.+|.++++++
T Consensus        81 ~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~-~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l  158 (204)
T d2go7a1          81 VVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE-SYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY  158 (204)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG-GGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred             CcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc-cccccccccccccccchhHHHHHHHHHHhCCCCceEE
Confidence            567899999999998 5699999998765 678899999887 6899888776555433   366778888999999999


Q ss_pred             EEECCCccccCCCCceEeecee
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      +|+|++.-.......|+....+
T Consensus       159 ~VgD~~~Di~~A~~~G~~~i~v  180 (204)
T d2go7a1         159 YIGDRTLDVEFAQNSGIQSINF  180 (204)
T ss_dssp             EEESSHHHHHHHHHHTCEEEES
T ss_pred             EEeCCHHHHHHHHHcCCeEEEE
Confidence            9999987665555555544333

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.94  E-value=1.6e-10  Score=88.20  Aligned_cols=98  Identities=15%  Similarity=0.136  Sum_probs=78.9

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC-CCccccccccCCCCCcEEEE
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL-GSYTKDLSAISPDLSSIFIL  156 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~-~~~~KdL~~l~~~~~~~iiI  156 (196)
                      .....||+.++|+.+++.+.++|.|+++..+++.+++.++.. .+|..++..+.....+ ..+.+-++++|.+++++++|
T Consensus        82 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~-~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V  160 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIH-HFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII  160 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCG-GGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             cccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccc-ccccccccccccccccccccchhhhhhhcccccceee
Confidence            356789999999999988999999999999999999999987 6898888766544332 25567788889999999999


Q ss_pred             ECCCccccCCCCceEeecee
Q psy17244        157 DNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       157 DD~~~~~~~~~~N~I~v~~f  176 (196)
                      .|++.-.......|+.....
T Consensus       161 GDs~~Di~aa~~aGi~~i~v  180 (210)
T d2ah5a1         161 GDTKFDMLGARETGIQKLAI  180 (210)
T ss_dssp             ESSHHHHHHHHHHTCEEEEE
T ss_pred             cCCHHHHHHHHHcCCeEEEE
Confidence            99987666555566644433

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.93  E-value=4e-11  Score=87.48  Aligned_cols=128  Identities=12%  Similarity=0.017  Sum_probs=80.6

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      .+++++|||+||||+++.......    ...   +            ......||+.++|+.+. +.|+|++.|+-+..+
T Consensus         5 ~kpk~vifDiDgTL~~~~~~~~~~----~~~---~------------~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~   65 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGRGPYD----LEK---C------------DTDVINPMVVELSKMYALMGYQIVVVSGRESGT   65 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSCCTTC----GGG---G------------GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred             CCCcEEEEEcCCCcEeCCCCCcCC----ccc---c------------ccCccCHHHHHHHHHHHhccCeEEEEecCcHHH
Confidence            467899999999999886432210    000   0            01345799999999998 699999999988766


Q ss_pred             HHHHHHHhcC--------CCceeeEEEEecCCCCCCCCc--cccccccCCCCCcE-EEEECCCccccCCCCceEeecee
Q psy17244        109 GAAVADKLDA--------RRHILRRRYYRQHCTPELGSY--TKDLSAISPDLSSI-FILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       109 a~~vl~~ldp--------~~~~f~~~l~r~~c~~~~~~~--~KdL~~l~~~~~~~-iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      ++...+.|..        ....+.....+..+...+...  ..-+..+..+..++ ++|||++........+||++-..
T Consensus        66 ~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V  144 (149)
T d1ltqa1          66 KEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV  144 (149)
T ss_dssp             SSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred             HHHHHHHHHHHhhhhhhcCCCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence            6555444432        112233344444444332211  12234445555665 56799999888888888887554

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.93  E-value=2.2e-10  Score=87.70  Aligned_cols=96  Identities=13%  Similarity=0.050  Sum_probs=77.4

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI  153 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~  153 (196)
                      ...+.||+.++|.+|. +.+.++|.|++...+++.+++.++.. .+|..+++.+.....++   .+..-+++++.+++++
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~  171 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID-HLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI  171 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG-GGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCch-hhccccccccccccccccchhhHHHHHHhhhhhhcc
Confidence            3567899999999998 57999999999999999999999987 68998887765554433   5667788889999999


Q ss_pred             EEEECCCccccCCCCceEeec
Q psy17244        154 FILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++|+|++.-.......|+.+.
T Consensus       172 ~~igD~~~Di~~A~~aG~~~i  192 (224)
T d2hsza1         172 LFVGDSQNDIFAAHSAGCAVV  192 (224)
T ss_dssp             EEEESSHHHHHHHHHHTCEEE
T ss_pred             chhcCcHHHHHHHHHcCCeEE
Confidence            999999876655444444333

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.75  E-value=1.1e-09  Score=82.52  Aligned_cols=103  Identities=10%  Similarity=-0.081  Sum_probs=76.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ..+.||+.++|+.++ +.+.++|.|+++. .+..+++.++.. .+|+.+++.+.....++   .+..-+++++.  +.+|
T Consensus        78 ~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~~~l  153 (187)
T d2fi1a1          78 PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA-AYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGL  153 (187)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG-GGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--SSEE
T ss_pred             CcccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccc-cccccccccccccccCCCHHHHHHHHHHcCC--CCeE
Confidence            456799999999998 5699999998765 556689999887 68998887766554432   45555666664  6699


Q ss_pred             EEECCCccccCCCCceEeeceecCCCCChHH
Q psy17244        155 ILDNSPGAYRGFPDNAIPIKSWFSDPSDTAL  185 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L  185 (196)
                      +|+|++.-.......|+...-+.+..+-+++
T Consensus       154 ~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~  184 (187)
T d2fi1a1         154 VIGDRPIDIEAGQAAGLDTHLFTSIVNLRQV  184 (187)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECSCHHHHHHH
T ss_pred             EEeCCHHHHHHHHHcCCEEEEECCCCChHhh
Confidence            9999998777777788887766654333333

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.73  E-value=6.7e-09  Score=80.02  Aligned_cols=95  Identities=14%  Similarity=0.025  Sum_probs=71.8

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---Cccccccc---cCCCC
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSA---ISPDL  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~---l~~~~  150 (196)
                      +..-||+.++|++|++  .+.++|.|++....+..+++.++.. .+|+.+.+.+.....++   .+..-+..   .+.++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p  168 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID-HYFPFGAFADDALDRNELPHIALERARRMTGANYSP  168 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS-TTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCG
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccc-ccccccccccccccccchhHHHHHHhhhhcccCCCh
Confidence            4667999999999984  3899999999999999999999998 58988887765443332   22222223   36789


Q ss_pred             CcEEEEECCCccccCCCCceEeec
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +++|.|.|++.-.......|+...
T Consensus       169 ~~~l~VGD~~~Di~aA~~aG~~~i  192 (228)
T d2hcfa1         169 SQIVIIGDTEHDIRCARELDARSI  192 (228)
T ss_dssp             GGEEEEESSHHHHHHHHTTTCEEE
T ss_pred             hHheeecCChHHHHHHHHcCCEEE
Confidence            999999999986666666676543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=98.66  E-value=1.4e-08  Score=77.30  Aligned_cols=94  Identities=14%  Similarity=0.035  Sum_probs=78.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      ....|++.++|+.+. +.+.++|.|++...+++.++...... .+|..+++.+++...++   .|.+-++++|.++++++
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~-~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l  170 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR-DGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAIL  170 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEE
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccc-ccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEE
Confidence            457899999999997 78999999999999999999998887 68999998887776654   67788999999999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|+|++.-.......|+..
T Consensus       171 ~VgD~~~Di~~A~~aG~~~  189 (220)
T d1zrna_         171 FVASNAWDATGARYFGFPT  189 (220)
T ss_dssp             EEESCHHHHHHHHHHTCCE
T ss_pred             EEecChHhHHHHHHcCCEE
Confidence            9999987555444555543

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=5.3e-09  Score=79.76  Aligned_cols=98  Identities=6%  Similarity=-0.088  Sum_probs=75.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCC----chhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCC
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTAS----MEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDL  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~----~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~  150 (196)
                      ...+|++.++|.+|. +.+.++|.|++    ...+...+....+.. .+|+.+++.+.+...++   .|.+-+++++.++
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~-~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p  174 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELS-QHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKP  174 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHG-GGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCT
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChH-hhhceeeehhhccCCCCChHHHHHHHHHhCCCc
Confidence            467999999999998 67999999974    344566666666665 58999988876655443   6788889999999


Q ss_pred             CcEEEEECCCccccCCCCceEeeceec
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +++|+|+|+..-.......|+...-+.
T Consensus       175 ~~~l~IgD~~~Di~~A~~aG~~ti~V~  201 (222)
T d1cr6a1         175 NEVVFLDDFGSNLKPARDMGMVTILVH  201 (222)
T ss_dssp             TSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred             ceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence            999999999887766666777654443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=98.57  E-value=4.3e-09  Score=80.56  Aligned_cols=92  Identities=11%  Similarity=0.083  Sum_probs=71.8

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF  154 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i  154 (196)
                      +..-||+.++|+.+. ..+.+++-|++  ..+..+++.++.. .+|..+++.+.....++   .+.+-++++|.+++++|
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l  166 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLT-GYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI  166 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCG-GGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred             ccccCCceeccccccccccceEEEeec--chhhHHHHhhccc-cccccccccccccccccChHHHHHHHHHcCCCCceEE
Confidence            457899999999998 67888888876  4578899999887 68988887766555443   57888999999999999


Q ss_pred             EEECCCccccCCCCceEee
Q psy17244        155 ILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       155 iIDD~~~~~~~~~~N~I~v  173 (196)
                      +|+|++.........|+.+
T Consensus       167 ~VgD~~~di~~A~~aG~~~  185 (221)
T d1o08a_         167 GLEDSQAGIQAIKDSGALP  185 (221)
T ss_dssp             EEESSHHHHHHHHHHTCEE
T ss_pred             EEecCHHHHHHHHHcCCEE
Confidence            9999987555444444433

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.56  E-value=4.8e-09  Score=80.33  Aligned_cols=98  Identities=10%  Similarity=0.146  Sum_probs=76.4

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEe-c-----CCCCCCCCccccccccCCCCC
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYR-Q-----HCTPELGSYTKDLSAISPDLS  151 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r-~-----~c~~~~~~~~KdL~~l~~~~~  151 (196)
                      .+...||+.++|+.+..  ..+|.|++...++..+++.++.. .+|...++. +     .+......|.+-++++|.+++
T Consensus        83 ~~~~~~g~~~~L~~l~~--~~~i~t~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~  159 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLK-PYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD  159 (222)
T ss_dssp             HCCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCG-GGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGG
T ss_pred             ccchhhhHHHHhhhccc--cceeeeecchhhhhhhhcccccc-cccceeecccccccccccccCHHHHHHHHHhhCCCCc
Confidence            36778999999999974  45788999999999999999987 577655443 2     223333467888999999999


Q ss_pred             cEEEEECCCccccCCCCceEeeceecC
Q psy17244        152 SIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      ++|+|+|++.-.......|+.+..+.+
T Consensus       160 ~~l~vgDs~~dv~aA~~aG~~~i~v~~  186 (222)
T d2fdra1         160 RVVVVEDSVHGIHGARAAGMRVIGFTG  186 (222)
T ss_dssp             GEEEEESSHHHHHHHHHTTCEEEEECC
T ss_pred             eEEEEcCCHHHHHHHHHcCCEEEEEcc
Confidence            999999999877666667777666653

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.50  E-value=2.9e-07  Score=68.33  Aligned_cols=121  Identities=17%  Similarity=0.148  Sum_probs=72.0

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch----
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME----  106 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~----  106 (196)
                      +|.|+||.||||+.......     ...   .+      +      .+.+-||+.+.|+.|. +.|.++|.|+.+.    
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~-----~~~---~~------~------~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~   61 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDF-----QVD---RF------D------KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQ   61 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CC-----CCC---SG------G------GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTST
T ss_pred             CcEEEEeCCCCeEeeCCCCC-----ccC---CH------H------HceECccHHHHHHHHHHcCCceeeecccccchhH
Confidence            68999999999997543211     000   00      0      1567899999999998 6899999998641    


Q ss_pred             ----hhHH----HHHHHhcCCCceeeEEEEe-----cCCCCC---CCCccccccccCCCCCcEEEEECCCccccCCCCce
Q psy17244        107 ----IYGA----AVADKLDARRHILRRRYYR-----QHCTPE---LGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNA  170 (196)
Q Consensus       107 ----~ya~----~vl~~ldp~~~~f~~~l~r-----~~c~~~---~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~  170 (196)
                          .-..    .+...+...+..+..++++     +.|...   .+++..-++.+|.+++++++|-|+..-.......|
T Consensus        62 ~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG  141 (161)
T d2fpwa1          62 SFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMG  141 (161)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHT
T ss_pred             HHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcC
Confidence                1111    1223333332234444443     344433   34778888899999999999999986444333333


Q ss_pred             Ee
Q psy17244        171 IP  172 (196)
Q Consensus       171 I~  172 (196)
                      +.
T Consensus       142 ~~  143 (161)
T d2fpwa1         142 IN  143 (161)
T ss_dssp             SE
T ss_pred             Ce
Confidence            33

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.43  E-value=1.3e-07  Score=72.35  Aligned_cols=93  Identities=11%  Similarity=0.162  Sum_probs=65.7

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecC----------CCCC----CC-Ccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH----------CTPE----LG-SYTKD  142 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~----------c~~~----~~-~~~Kd  142 (196)
                      +.++||+.++|+.|. +.+.++|.|++...+++.+++.+++...++...+.-+.          +...    ++ ...+-
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  153 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV  153 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHH
Confidence            568999999999996 78999999999999999999999876444333322110          0000    11 11234


Q ss_pred             ccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244        143 LSAISPDLSSIFILDNSPGAYRGFPDNAI  171 (196)
Q Consensus       143 L~~l~~~~~~~iiIDD~~~~~~~~~~N~I  171 (196)
                      ++.++.++++++.|-|+..-.......++
T Consensus       154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~  182 (226)
T d2feaa1         154 IHELSEPNQYIIMIGDSVTDVEAAKLSDL  182 (226)
T ss_dssp             HHHHCCTTCEEEEEECCGGGHHHHHTCSE
T ss_pred             HHHhcCCCceEEEEeCchhhHHHHHHCCE
Confidence            66778899999999999986654444444

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.41  E-value=1.2e-07  Score=72.99  Aligned_cols=95  Identities=14%  Similarity=0.050  Sum_probs=77.3

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~ii  155 (196)
                      ....||+.++|+.|++.+.++|.|++....+..+++.++.. .+|+.+++.+.+...+   ..|..-++++|.+++++++
T Consensus        99 ~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~  177 (230)
T d1x42a1          99 GELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIK-DLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY  177 (230)
T ss_dssp             CCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCG-GGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred             CcccccHHHHHHHhhccCceeeeeccccccchhhhcccccc-cccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence            56789999999999988999999999999999999999987 6899998877655444   3578888999999999999


Q ss_pred             EECCCcc-ccCCCCceEeec
Q psy17244        156 LDNSPGA-YRGFPDNAIPIK  174 (196)
Q Consensus       156 IDD~~~~-~~~~~~N~I~v~  174 (196)
                      |+|++.. .......|+...
T Consensus       178 vgD~~~~Di~~A~~~G~~~v  197 (230)
T d1x42a1         178 VGDNPVKDCGGSKNLGMTSI  197 (230)
T ss_dssp             EESCTTTTHHHHHTTTCEEE
T ss_pred             eecCcHhHHHHHHHcCCEEE
Confidence            9998753 443344555443

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=98.36  E-value=1.4e-08  Score=74.85  Aligned_cols=101  Identities=18%  Similarity=0.144  Sum_probs=79.2

Q ss_pred             EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh-cCCCceeeEEEEecCCCCCCC---CccccccccCCCC
Q psy17244         76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL-DARRHILRRRYYRQHCTPELG---SYTKDLSAISPDL  150 (196)
Q Consensus        76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l-dp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~  150 (196)
                      .......|++.+++..+. +.+.+++.|++....+...+... +.. .+|..+++.+.....++   .|..-++++|.++
T Consensus        80 ~~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~  158 (197)
T d2b0ca1          80 AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAADHIYLSQDLGMRKPEARIYQHVLQAEGFSP  158 (197)
T ss_dssp             TCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             HhccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch-hhccceeecccccccccchHHHHHHHHhcCCCC
Confidence            345788999999999997 78999999999988887777765 444 57888888766555443   5677888899999


Q ss_pred             CcEEEEECCCccccCCCCceEeeceec
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIKSWF  177 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~~f~  177 (196)
                      +++|+|+|++.-.......|+...-+.
T Consensus       159 ~~~l~vgDs~~di~~A~~aG~~ti~v~  185 (197)
T d2b0ca1         159 SDTVFFDDNADNIEGANQLGITSILVK  185 (197)
T ss_dssp             GGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred             CeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence            999999999987766667777655444

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=98.34  E-value=7.1e-08  Score=74.34  Aligned_cols=95  Identities=6%  Similarity=-0.021  Sum_probs=78.7

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ...-|++.+.|+.+. .+.+.+.|++...++..+++..+.. .+|+.+++.+.....++   .|.+-++++|.+++++|+
T Consensus        92 ~~~~~~~~~~L~~l~-~~~~~v~s~~~~~~~~~~~~~~~~~-~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~  169 (245)
T d1qq5a_          92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLT-DSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF  169 (245)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCG-GGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred             cccchhhhHHHHHHh-hhceeEEeccchHHHHHHHhhcccc-cccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence            456799999999886 4678999999999999999998876 68999998877766554   688899999999999999


Q ss_pred             EECCCccccCCCCceEeece
Q psy17244        156 LDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       156 IDD~~~~~~~~~~N~I~v~~  175 (196)
                      |+|++.-.......|+...-
T Consensus       170 VgD~~~di~~A~~aG~~tv~  189 (245)
T d1qq5a_         170 VSSNGFDVGGAKNFGFSVAR  189 (245)
T ss_dssp             EESCHHHHHHHHHHTCEEEE
T ss_pred             EeCCHHHHHHHHHcCCeEEE
Confidence            99999766666666765543

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.31  E-value=3.4e-07  Score=70.75  Aligned_cols=110  Identities=15%  Similarity=0.125  Sum_probs=72.2

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc----
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM----  105 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~----  105 (196)
                      +.+.|+||+||||+......        ....+               +.+-||+.+.|++|. +.|.++|.|+.+    
T Consensus        22 ~~~Aif~DrDGtl~~~~~y~--------~~~~~---------------~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~   78 (209)
T d2o2xa1          22 HLPALFLDRDGTINVDTDYP--------SDPAE---------------IVLRPQMLPAIATANRAGIPVVVVTNQSGIAR   78 (209)
T ss_dssp             SCCCEEECSBTTTBCCCSCT--------TCGGG---------------CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHT
T ss_pred             CCCEEEEeCCCCeECCCCCC--------CCHHH---------------eEecccHHHHHHHHHhhCCeEEEecccccchh
Confidence            45689999999998753211        11111               456799999999998 689999999843    


Q ss_pred             --------hhhHHHHHHHhcCCCceeeEEEEec------------CCCCCC---CCccccccccCCCCCcEEEEECCCcc
Q psy17244        106 --------EIYGAAVADKLDARRHILRRRYYRQ------------HCTPEL---GSYTKDLSAISPDLSSIFILDNSPGA  162 (196)
Q Consensus       106 --------~~ya~~vl~~ldp~~~~f~~~l~r~------------~c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~  162 (196)
                              ....+.+.+.+...+..+...++..            .|.+.+   +++.+-++.++.+++++++|=|+..-
T Consensus        79 g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~D  158 (209)
T d2o2xa1          79 GYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLAD  158 (209)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHH
T ss_pred             hhhhhhhhhhhhhHHHHHhhhcccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHH
Confidence                    1223334444444433344444432            233322   35677788889999999999998764


Q ss_pred             c
Q psy17244        163 Y  163 (196)
Q Consensus       163 ~  163 (196)
                      .
T Consensus       159 i  159 (209)
T d2o2xa1         159 M  159 (209)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.30  E-value=6.8e-07  Score=63.42  Aligned_cols=96  Identities=13%  Similarity=0.103  Sum_probs=63.1

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +++++|+||||++.....                           +....|++-++|+.|. ++++|+|||+-...+...
T Consensus         1 mti~vDiDGTl~~~~~~~---------------------------~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~   53 (122)
T d2obba1           1 MTIAVDFDGTIVEHRYPR---------------------------IGEEIPFAVETLKLLQQEKHRLILWSVREGELLDE   53 (122)
T ss_dssp             CEEEECCBTTTBCSCTTS---------------------------CCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             CEEEEEcCCCcCCCCCCc---------------------------cccccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence            479999999997543210                           0235789999999997 789999999999999888


Q ss_pred             HHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCc
Q psy17244        112 VADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPG  161 (196)
Q Consensus       112 vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~  161 (196)
                      ..+.|..++-.+......    ...+  .+.=+..++.+.--+.|||..-
T Consensus        54 t~~wL~~~~i~yd~i~~~----~~~~--~~~~~~~~~Kp~ad~yIDDKai   97 (122)
T d2obba1          54 AIEWCRARGLEFYAANKD----YPEE--ERDHQGFSRKLKADLFIDDRNV   97 (122)
T ss_dssp             HHHHHHTTTCCCSEESSS----STTC-----CCSCCSSCCCSEEECTTST
T ss_pred             HHHHHHHcCCCceehhcc----CccC--ccccceecCCccccEEEeCCcc
Confidence            888888765444322111    0111  1111223344555689999764

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=8.6e-08  Score=72.20  Aligned_cols=99  Identities=8%  Similarity=-0.077  Sum_probs=74.4

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHH----HhcCCCceeeEEEEecCCCCCCC---CccccccccCCCC
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVAD----KLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDL  150 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~----~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~  150 (196)
                      ...+|++.++|..|. +.+.++|-|++....+...+.    ..+.. .+|+.+++.+.+...++   .|.+-++.+|.++
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p  176 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK-MHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP  176 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH-TTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChH-hhccEEEeccccccchhHHHHHHHHhhhcccCc
Confidence            567999999999997 689999999886655444333    22332 47888888776655543   6788899999999


Q ss_pred             CcEEEEECCCccccCCCCceEeeceecC
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIKSWFS  178 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~~f~~  178 (196)
                      +++|+|+|++.-.......|+...-+..
T Consensus       177 ~e~l~VgD~~~Di~~A~~~G~~ti~v~~  204 (225)
T d1zd3a1         177 SEVVFLDDIGANLKPARDLGMVTILVQD  204 (225)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred             cceeEEecCHHHHHHHHHcCCEEEEECC
Confidence            9999999998776666677776655543

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.23  E-value=4.4e-07  Score=70.10  Aligned_cols=93  Identities=6%  Similarity=0.007  Sum_probs=78.0

Q ss_pred             EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244         79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI  155 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii  155 (196)
                      ....||+.++|+.|++.+.++|.|++....+..+++..+.. .+|+.+++.++....++   .|.+-++++|.+++++++
T Consensus       108 ~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~  186 (247)
T d2gfha1         108 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQ-SYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM  186 (247)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCG-GGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred             CccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccc-ccccccccccccccchhhhhhHHHHHHHhhcCHHhcce
Confidence            45679999999999999999999999999999999999886 68999998887776554   577888899999999999


Q ss_pred             EECCCcc-ccCCCCceEe
Q psy17244        156 LDNSPGA-YRGFPDNAIP  172 (196)
Q Consensus       156 IDD~~~~-~~~~~~N~I~  172 (196)
                      |.|+... .......|+.
T Consensus       187 iGD~~~~Di~~A~~~G~~  204 (247)
T d2gfha1         187 VGDTLETDIQGGLNAGLK  204 (247)
T ss_dssp             EESCTTTHHHHHHHTTCS
T ss_pred             eccChHhHHHHHHHcCCe
Confidence            9999753 5444556664

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.9e-06  Score=64.32  Aligned_cols=102  Identities=12%  Similarity=0.117  Sum_probs=67.8

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEEec-CCCCC---CC-----Cccc--ccc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYYRQ-HCTPE---LG-----SYTK--DLS  144 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~r~-~c~~~---~~-----~~~K--dL~  144 (196)
                      .+.++||+.+++++|. +++.++|-|++...+++++++.++... .++...+.-+ .....   ..     ...|  -++
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~  159 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIK  159 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHH
Confidence            4668999999999998 589999999999999999999997652 2443333211 10000   00     0001  111


Q ss_pred             cc--CCCCCcEEEEECCCccccCCCCceEeeceecCCC
Q psy17244        145 AI--SPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDP  180 (196)
Q Consensus       145 ~l--~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~  180 (196)
                      .+  +.++++++.|-|+..-.......|+.| .|.+++
T Consensus       160 ~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~~~~  196 (217)
T d1nnla_         160 LLKEKFHFKKIIMIGDGATDMEACPPADAFI-GFGGNV  196 (217)
T ss_dssp             HHHHHHCCSCEEEEESSHHHHTTTTTSSEEE-EECSSC
T ss_pred             HHHhccCccccEEEEeCHhhHHHHHhCCceE-EECCCH
Confidence            11  347889999999999877777777765 455443

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=9.4e-06  Score=60.54  Aligned_cols=108  Identities=18%  Similarity=0.147  Sum_probs=68.2

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh----
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI----  107 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~----  107 (196)
                      +.|+||+||||+......        ....+               +++-||+.+.|+.|. +.|.++|.|+.+..    
T Consensus         3 ~Av~~DrDGtl~~~~~y~--------~~~~~---------------~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~   59 (182)
T d2gmwa1           3 PAIFLDRDGTINVDHGYV--------HEIDN---------------FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGK   59 (182)
T ss_dssp             CEEEECSBTTTBCCCSSC--------CSGGG---------------CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTS
T ss_pred             CEEEEeCCCCccCCCCCC--------CCHHH---------------eeECCCHHHHHHHHhhcCchhhhhhccchhhhhh
Confidence            579999999998543210        01111               456699999999998 68999999997631    


Q ss_pred             ----hHHHHHH----HhcCCCceeeEEEEec------------CCCCCC---CCccccccccCCCCCcEEEEECCCccc
Q psy17244        108 ----YGAAVAD----KLDARRHILRRRYYRQ------------HCTPEL---GSYTKDLSAISPDLSSIFILDNSPGAY  163 (196)
Q Consensus       108 ----ya~~vl~----~ldp~~~~f~~~l~r~------------~c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~  163 (196)
                          ....+..    .+...+..+....++.            .|...+   +++.+-+++++.+++++++|=|+..-.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di  138 (182)
T d2gmwa1          60 FTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDM  138 (182)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHH
T ss_pred             hHHHhhhhhhhhhhhhhhhhcccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHH
Confidence                1222211    1111111233333332            344433   366778888999999999999998644

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.81  E-value=1.9e-05  Score=55.83  Aligned_cols=69  Identities=26%  Similarity=0.198  Sum_probs=47.6

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc------
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM------  105 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~------  105 (196)
                      +++++||||||+.....             ++.            .....|++-+++..+. +++.|+|||+-.      
T Consensus         2 K~i~~DiDGTI~~~~~~-------------~y~------------~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~   56 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTS-------------DYR------------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEG   56 (124)
T ss_dssp             CEEEECSTTTTBCCCCS-------------CGG------------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTT
T ss_pred             CEEEEeCCCCeECCCCC-------------CcC------------ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCC
Confidence            58999999999865321             010            1456899999999995 899999999983      


Q ss_pred             ------hhhHHHHHHHhcCCCceeeEE
Q psy17244        106 ------EIYGAAVADKLDARRHILRRR  126 (196)
Q Consensus       106 ------~~ya~~vl~~ldp~~~~f~~~  126 (196)
                            ..+.+...+.|...+-.+...
T Consensus        57 ~~~~~~~~~~~~T~~wL~~~gI~Yd~L   83 (124)
T d1xpja_          57 NVGKINIHTLPIITEWLDKHQVPYDEI   83 (124)
T ss_dssp             CHHHHHHHTHHHHHHHHHHTTCCCSEE
T ss_pred             cHHHHHHHHHHHHHHHHHHcCCCceEE
Confidence                  345556666666554333333

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=97.67  E-value=2.9e-06  Score=65.88  Aligned_cols=95  Identities=5%  Similarity=-0.090  Sum_probs=75.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee-eEEEEecCCCCCC---CCccccccccCC-CCCc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL-RRRYYRQHCTPEL---GSYTKDLSAISP-DLSS  152 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f-~~~l~r~~c~~~~---~~~~KdL~~l~~-~~~~  152 (196)
                      +...||+.++|+.|+ +.+.++|.|++...+++.+++.++.. .+| +.+++.+++...+   ..+.+-++++|. ++++
T Consensus        98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~-~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~  176 (257)
T d1swva_          98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ-GYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH  176 (257)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT-TCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred             CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc-ccccccccccccccccccChHHHHHHHHHhCCCCcce
Confidence            467899999999998 56999999999999999999999877 344 5666666665543   268889999997 5699


Q ss_pred             EEEEECCCccccCCCCceEeec
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      +|+|+|+..-.......|+.+.
T Consensus       177 ~v~VgDs~~Di~aA~~aG~~ti  198 (257)
T d1swva_         177 MIKVGDTVSDMKEGRNAGMWTV  198 (257)
T ss_dssp             EEEEESSHHHHHHHHHTTSEEE
T ss_pred             EEEEeCChhhHHHHHHCCCEEE
Confidence            9999999876655555555433

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.64  E-value=1.9e-05  Score=58.33  Aligned_cols=94  Identities=11%  Similarity=0.106  Sum_probs=66.3

Q ss_pred             EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC--------CC-----Ccccccc
Q psy17244         79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE--------LG-----SYTKDLS  144 (196)
Q Consensus        79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~--------~~-----~~~KdL~  144 (196)
                      ....+|+.+.++.+. +...+++.|++...++.......... ..+...+..+.....        .+     ....-+.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD-YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK  152 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS-EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchh-hhhhhhhccccccccccccccccccccccchhhhHHH
Confidence            567899999999998 67999999999999999999998876 456555554433221        01     1123344


Q ss_pred             ccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244        145 AISPDLSSIFILDNSPGAYRGFPDNAIPI  173 (196)
Q Consensus       145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v  173 (196)
                      .++.++++++.|-|+..-..+...-|+.|
T Consensus       153 ~~~~~~~~~i~iGDs~nDi~m~~~ag~~v  181 (210)
T d1j97a_         153 IEGINLEDTVAVGDGANDISMFKKAGLKI  181 (210)
T ss_dssp             HHTCCGGGEEEEESSGGGHHHHHHCSEEE
T ss_pred             HhcccccceEEecCCcChHHHHHHCCCCE
Confidence            55788999999999996544333334444

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=0.00019  Score=54.35  Aligned_cols=109  Identities=22%  Similarity=0.258  Sum_probs=67.6

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc---
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM---  105 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~---  105 (196)
                      .+++.++||+||||+......     .-+....+              +..+.|++.+.|+.|. +.|.++|.|+.+   
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~-----~~~~~~~d--------------~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~   79 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGK-----VFPTSPSD--------------WRILYPEIPKKLQELAAEGYKLVIFTNQMGIG   79 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSC-----SSCSSTTC--------------CEESCTTHHHHHHHHHHHTCEEEEEEECHHHH
T ss_pred             CcCcEEEEECCCceEeeCCCC-----cCCCChhh--------------ceeccCCHHHHHHHHHhCCcEEEEecCcchhc
Confidence            367899999999999865321     11222222              2566899999999997 689999999964   


Q ss_pred             -----hhh----HHHHHHHhcCCCceeeEEEEecCCCCCCC---Ccccccccc----CCCCCcEEEEECCC
Q psy17244        106 -----EIY----GAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAI----SPDLSSIFILDNSP  160 (196)
Q Consensus       106 -----~~y----a~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l----~~~~~~~iiIDD~~  160 (196)
                           ..-    .+.+++.++..   +...+...+|.+.++   ++.+-++..    +.+++++++|=|..
T Consensus        80 rg~~s~~~~~~~~~~i~~~l~~~---~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1          80 RGKLPAEVFKGKVEAVLEKLGVP---FQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             HTSSCHHHHHHHHHHHHHHHTSC---CEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             cCCcCHHHHHHHHHHHHHHcCCC---ccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence                 222    23455555432   222333345554433   333333333    46888999998865

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=1e-05  Score=61.31  Aligned_cols=98  Identities=9%  Similarity=-0.040  Sum_probs=73.1

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEE-EEecCCCCC---CCCccccccccCCCCCc
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRR-YYRQHCTPE---LGSYTKDLSAISPDLSS  152 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~-l~r~~c~~~---~~~~~KdL~~l~~~~~~  152 (196)
                      ....+||+.++|++|. +.+.++|.|++.......+++.++.. .++... ...+.....   ...|..-++++|.++++
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~  203 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG-DILELVDGHFDTKIGHKVESESYRKIADSIGCSTNN  203 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB-CCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGG
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc-hhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCc
Confidence            3567899999999997 68999999999999999999988765 344422 222323222   23678889999999999


Q ss_pred             EEEEECCCccccCCCCceEeecee
Q psy17244        153 IFILDNSPGAYRGFPDNAIPIKSW  176 (196)
Q Consensus       153 ~iiIDD~~~~~~~~~~N~I~v~~f  176 (196)
                      +++|+|++.-.......|+.+.-.
T Consensus       204 ~l~vgD~~~dv~aA~~aG~~ti~v  227 (253)
T d1zs9a1         204 ILFLTDVTREASAAEEADVHVAVV  227 (253)
T ss_dssp             EEEEESCHHHHHHHHHTTCEEEEE
T ss_pred             EEEEeCCHHHHHHHHHcCCEEEEE
Confidence            999999987665555666654443

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=7.2e-05  Score=56.21  Aligned_cols=55  Identities=18%  Similarity=0.087  Sum_probs=40.7

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      ++++++|||||||+++..                               ..-|...+.|+++.+...+++.|.+....+.
T Consensus         2 ~~kl~~fDlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~g~~~i~Tgr~~~~~~   50 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQ-------------------------------KITKEMDDFLQKLRQKIKIGVVGGSDFEKVQ   50 (243)
T ss_dssp             CSEEEEEESBTTTBCTTS-------------------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHH
T ss_pred             CCEEEEEcCcCCeeCCCC-------------------------------cCCHHHHHHHHHHHcCCCEEEEcCCChHHhH
Confidence            778999999999997531                               1246788899999877678888887766665


Q ss_pred             HHHHHh
Q psy17244        111 AVADKL  116 (196)
Q Consensus       111 ~vl~~l  116 (196)
                      ..+...
T Consensus        51 ~~~~~~   56 (243)
T d2amya1          51 EQLGND   56 (243)
T ss_dssp             HHHCTT
T ss_pred             HHHhhh
Confidence            555443

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.0002  Score=55.31  Aligned_cols=51  Identities=25%  Similarity=0.326  Sum_probs=38.0

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      -+.++|||||||+++..                              . . |++.+|++.+. ..+.+++.|+++....+
T Consensus         3 ik~VifDlDGTL~~~~~------------------------------~-i-~~a~e~i~~l~~~g~~~~~~TN~~~~~~~   50 (250)
T d2c4na1           3 IKNVICDIDGVLMHDNV------------------------------A-V-PGAAEFLHGIMDKGLPLVLLTNYPSQTGQ   50 (250)
T ss_dssp             CCEEEEECBTTTEETTE------------------------------E-C-TTHHHHHHHHHHTTCCEEEEESCCSCCHH
T ss_pred             CCEEEEECCCeeEECCC------------------------------c-C-ccHHHHHHHHHHCCCcEEEEeCCCCCCHH
Confidence            46899999999986531                              1 2 78899999997 67999999987654444


Q ss_pred             HHHH
Q psy17244        111 AVAD  114 (196)
Q Consensus       111 ~vl~  114 (196)
                      .+.+
T Consensus        51 ~~~~   54 (250)
T d2c4na1          51 DLAN   54 (250)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4433

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=97.03  E-value=0.00034  Score=54.06  Aligned_cols=52  Identities=21%  Similarity=0.274  Sum_probs=38.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      +=+.++|||||||+++.                               -.. |++.++|+.|. +...+++.|++...-.
T Consensus         6 ~ik~vlFDlDGTL~~~~-------------------------------~~i-~~a~e~l~~l~~~g~~~~~~TN~~~~~~   53 (261)
T d1vjra_           6 KIELFILDMDGTFYLDD-------------------------------SLL-PGSLEFLETLKEKNKRFVFFTNNSSLGA   53 (261)
T ss_dssp             GCCEEEECCBTTTEETT-------------------------------EEC-TTHHHHHHHHHHTTCEEEEEESCTTSCH
T ss_pred             hCCEEEEeCCCeeEECC-------------------------------ccC-chHHHHHHHHHHcCCCEEEEeCCCCCCH
Confidence            34689999999999763                               122 78999999997 6789999998654444


Q ss_pred             HHHHH
Q psy17244        110 AAVAD  114 (196)
Q Consensus       110 ~~vl~  114 (196)
                      ..+.+
T Consensus        54 ~~~~~   58 (261)
T d1vjra_          54 QDYVR   58 (261)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44433

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.00064  Score=50.50  Aligned_cols=58  Identities=16%  Similarity=0.161  Sum_probs=45.3

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG  109 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya  109 (196)
                      ++..+++||||||+++..                               ..-|...+.|+.+. ++..+++-|.-+...+
T Consensus         3 ~~~li~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~   51 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHS-------------------------------YDWQPAAPWLTRLREANVPVILCSSKTSAEM   51 (232)
T ss_dssp             CCEEEEEECTTTTSCSSC-------------------------------CSCCTTHHHHHHHHHTTCCEEEECSSCHHHH
T ss_pred             CCEEEEEECCCCccCCcC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEeCCChhhc
Confidence            445566799999996531                               12355678899997 6799999999999999


Q ss_pred             HHHHHHhcCC
Q psy17244        110 AAVADKLDAR  119 (196)
Q Consensus       110 ~~vl~~ldp~  119 (196)
                      ..++..++..
T Consensus        52 ~~~~~~~~~~   61 (232)
T d1xvia_          52 LYLQKTLGLQ   61 (232)
T ss_dssp             HHHHHHTTCT
T ss_pred             hhHHHHhccC
Confidence            9999988754

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.90  E-value=0.00037  Score=53.70  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=37.7

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      ++++|||||||++..                               -.. |++.++|+.|. ....+++-|+++.+-.+.
T Consensus         3 k~v~fDlDGTL~~~~-------------------------------~~i-~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~   50 (253)
T d1yv9a1           3 QGYLIDLDGTIYLGK-------------------------------EPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPET   50 (253)
T ss_dssp             CEEEECCBTTTEETT-------------------------------EEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHH
T ss_pred             CEEEEcCCCccEeCC-------------------------------CcC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHH
Confidence            479999999998653                               123 88999999997 578999999766544444


Q ss_pred             HHHH
Q psy17244        112 VADK  115 (196)
Q Consensus       112 vl~~  115 (196)
                      +.+.
T Consensus        51 ~~~~   54 (253)
T d1yv9a1          51 VAQR   54 (253)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.00055  Score=52.63  Aligned_cols=57  Identities=19%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      .|.+++||||||+++..                               .+-|...+.|++|. +...++|-|..+...+.
T Consensus         4 iKli~~DlDGTL~~~~~-------------------------------~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~   52 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDH-------------------------------TISPAVKNAIAAARARGVNVVLTTGRPYAGVH   52 (271)
T ss_dssp             CCEEEECCCCCCSCTTS-------------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTH
T ss_pred             eeEEEEeCCccccCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence            56799999999986531                               12367788999997 56999999999999999


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .+++.+...
T Consensus        53 ~~~~~l~l~   61 (271)
T d1rkqa_          53 NYLKELHME   61 (271)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHhcCc
Confidence            999987643

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=96.82  E-value=0.00048  Score=53.16  Aligned_cols=48  Identities=19%  Similarity=0.247  Sum_probs=35.6

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.++||+||||+++..                               .. |++.++++.|. ....+++-|+++..-.+.
T Consensus         3 k~vlFDlDGTL~~~~~-------------------------------~i-~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~   50 (253)
T d1wvia_           3 KGYLIDLDGTIYKGKD-------------------------------RI-PAGEDFVKRLQERQLPYILVTNNTTRTPEM   50 (253)
T ss_dssp             CEEEEECBTTTEETTE-------------------------------EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHH
T ss_pred             CEEEEcCcCceEECCC-------------------------------cC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHH
Confidence            5799999999997641                               12 88999999987 678889988765443333


Q ss_pred             H
Q psy17244        112 V  112 (196)
Q Consensus       112 v  112 (196)
                      +
T Consensus        51 ~   51 (253)
T d1wvia_          51 V   51 (253)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.70  E-value=0.0012  Score=49.01  Aligned_cols=57  Identities=11%  Similarity=0.089  Sum_probs=44.7

Q ss_pred             CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244         32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA  110 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~  110 (196)
                      -|.++||+||||+++..                               .+.|-..+.|+++. +...+++-|..+...+.
T Consensus         2 iK~i~~D~DGTL~~~~~-------------------------------~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~   50 (230)
T d1wr8a_           2 IKAISIDIDGTITYPNR-------------------------------MIHEKALEAIRRAESLGIPIMLVTGNTVQFAE   50 (230)
T ss_dssp             CCEEEEESTTTTBCTTS-------------------------------CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHH
T ss_pred             ceEEEEecCCCCcCCCC-------------------------------ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHH
Confidence            46899999999986531                               12366778888886 57899999998999999


Q ss_pred             HHHHHhcCC
Q psy17244        111 AVADKLDAR  119 (196)
Q Consensus       111 ~vl~~ldp~  119 (196)
                      .++..+...
T Consensus        51 ~~~~~~~~~   59 (230)
T d1wr8a_          51 AASILIGTS   59 (230)
T ss_dssp             HHHHHHTCC
T ss_pred             HHHHhcCCC
Confidence            988887665

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.69  E-value=0.00059  Score=51.34  Aligned_cols=57  Identities=9%  Similarity=0.018  Sum_probs=45.3

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      +.+++|+||||+++..                               ..-|++.+.|+.+. +...+++-|..+..++..
T Consensus         4 Kli~~D~DGTL~~~~~-------------------------------~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~   52 (225)
T d1l6ra_           4 RLAAIDVDGNLTDRDR-------------------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPVVYA   52 (225)
T ss_dssp             CEEEEEHHHHSBCTTS-------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred             EEEEEecCCCCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHH
Confidence            5899999999996541                               12467788888887 578999999988889999


Q ss_pred             HHHHhcCCC
Q psy17244        112 VADKLDARR  120 (196)
Q Consensus       112 vl~~ldp~~  120 (196)
                      +...++...
T Consensus        53 ~~~~~~~~~   61 (225)
T d1l6ra_          53 LKIFLGING   61 (225)
T ss_dssp             HHHHHTCCS
T ss_pred             HHHHcCCCc
Confidence            988887654

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.60  E-value=0.0012  Score=50.84  Aligned_cols=56  Identities=25%  Similarity=0.294  Sum_probs=43.5

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      |.+++||||||++....                               .=|...+.|+++. ++..+++-|.-+...+..
T Consensus         2 Kli~~DlDGTLl~~~~~-------------------------------i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~   50 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKHQ-------------------------------VSLENENALRQAQRDGIEVVVSTGRAHFDVMS   50 (285)
T ss_dssp             CEEEEECCCCCSCTTSC-------------------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred             eEEEEECCccccCCCCc-------------------------------cCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence            57999999999965321                               1256778888887 568999999888888888


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        51 ~~~~l~~~   58 (285)
T d1nrwa_          51 IFEPLGIK   58 (285)
T ss_dssp             HHGGGTCC
T ss_pred             HHHHhCCC
Confidence            88888654

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.53  E-value=0.0026  Score=47.52  Aligned_cols=54  Identities=15%  Similarity=0.262  Sum_probs=43.3

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      |.+++||||||++...                                 .+-..+-|+++. ++..+++-|.-+...+..
T Consensus         3 Kli~~DlDGTLl~~~~---------------------------------~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~   49 (243)
T d1wzca1           3 RLIFLDIDKTLIPGYE---------------------------------PDPAKPIIEELKDMGFEIIFNSSKTRAEQEY   49 (243)
T ss_dssp             EEEEECCBTTTBSSSC---------------------------------SGGGHHHHHHHHHTTEEEEEECSSCHHHHHH
T ss_pred             EEEEEeCCCCCCCCCC---------------------------------CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence            6899999999995421                                 122456777776 789999999999999999


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        50 ~~~~~~~~   57 (243)
T d1wzca1          50 YRKELEVE   57 (243)
T ss_dssp             HHHHHTCC
T ss_pred             HHHHhccc
Confidence            99999875

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.0018  Score=49.84  Aligned_cols=55  Identities=22%  Similarity=0.210  Sum_probs=37.9

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~v  112 (196)
                      |.+++||||||+++..                               ..-|...+.|+.+++.-.+++-|..+...+..+
T Consensus         3 Kli~~DlDGTL~~~~~-------------------------------~i~~~~~~al~~l~~~~~~~i~TGR~~~~~~~~   51 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNL-------------------------------EISEKDRRNIEKLSRKCYVVFASGRMLVSTLNV   51 (267)
T ss_dssp             CEEEEECCCCCSCTTS-------------------------------CCCHHHHHHHHHHTTTSEEEEECSSCHHHHHHH
T ss_pred             EEEEEeCCccccCCcC-------------------------------ccCHHHHHHHHHHHcCCEEEEECCCChHHHHHH
Confidence            4789999999997532                               124566777777776666777776666666677


Q ss_pred             HHHhcC
Q psy17244        113 ADKLDA  118 (196)
Q Consensus       113 l~~ldp  118 (196)
                      ++.+.+
T Consensus        52 ~~~~~~   57 (267)
T d1nf2a_          52 EKKYFK   57 (267)
T ss_dssp             HHHHSS
T ss_pred             HHHhcc
Confidence            666544

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=96.27  E-value=0.0018  Score=49.58  Aligned_cols=58  Identities=14%  Similarity=0.114  Sum_probs=45.0

Q ss_pred             CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244         30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY  108 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y  108 (196)
                      ..-+.|++||||||+....                              -..-|...+.|.++. ++..++|-|.-+...
T Consensus         8 ~~ikli~~DlDGTLl~~~~------------------------------~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~   57 (283)
T d2b30a1           8 ADIKLLLIDFDGTLFVDKD------------------------------IKVPSENIDAIKEAIEKGYMVSICTGRSKVG   57 (283)
T ss_dssp             CCCCEEEEETBTTTBCCTT------------------------------TCSCHHHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred             cCccEEEEECCCCCcCCCC------------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            4567899999999984321                              012466778888886 789999999999999


Q ss_pred             HHHHHHHhc
Q psy17244        109 GAAVADKLD  117 (196)
Q Consensus       109 a~~vl~~ld  117 (196)
                      +..+++.++
T Consensus        58 ~~~~~~~l~   66 (283)
T d2b30a1          58 ILSAFGEEN   66 (283)
T ss_dssp             HHHHHCHHH
T ss_pred             HHHHHHHhC
Confidence            999888764

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0011  Score=50.96  Aligned_cols=57  Identities=18%  Similarity=0.191  Sum_probs=42.9

Q ss_pred             eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244         33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA  111 (196)
Q Consensus        33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~  111 (196)
                      |.+++|+||||+.+...                              ...|...+.|+.+. +...+++-|.-+...+..
T Consensus         3 Kli~~DlDGTLl~~~~~------------------------------~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~   52 (269)
T d1rlma_           3 KVIVTDMDGTFLNDAKT------------------------------YNQPRFMAQYQELKKRGIKFVVASGNQYYQLIS   52 (269)
T ss_dssp             CEEEECCCCCCSCTTSC------------------------------CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGG
T ss_pred             EEEEEeCCccCcCCCCc------------------------------CChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence            47899999999975421                              12366778888887 568999999888888888


Q ss_pred             HHHHhcCC
Q psy17244        112 VADKLDAR  119 (196)
Q Consensus       112 vl~~ldp~  119 (196)
                      +++.++..
T Consensus        53 ~~~~l~~~   60 (269)
T d1rlma_          53 FFPELKDE   60 (269)
T ss_dssp             GCTTTTTT
T ss_pred             HHHHhCcc
Confidence            88777654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0023  Score=47.32  Aligned_cols=30  Identities=23%  Similarity=0.130  Sum_probs=19.8

Q ss_pred             ccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244         83 PHVDFFLDIVSQWYELVVFTASMEIYGAAV  112 (196)
Q Consensus        83 P~l~eFL~~l~~~yei~I~T~~~~~ya~~v  112 (196)
                      |...+.|+++.+.--+++.|.+....+...
T Consensus        21 ~~~~~~i~~l~~~g~~~i~tgrr~~~~~~~   50 (244)
T d2fuea1          21 PEVAAFLQKLRSRVQIGVVGGSDYCKIAEQ   50 (244)
T ss_dssp             HHHHHHHHHHTTTSEEEEECSSCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEecCChhhhhhh
Confidence            456788888876556777777765554443

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.84  E-value=0.0025  Score=48.21  Aligned_cols=56  Identities=16%  Similarity=0.216  Sum_probs=39.0

Q ss_pred             CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      +|..+++||||||+.....                             .   ..++.+++..++...+++-|.-+...+.
T Consensus         2 ~~~li~~DlDGTL~~~~~~-----------------------------~---~~~~~~~~~~~~g~~v~i~TGR~~~~~~   49 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQA-----------------------------L---EHLQEYLGDRRGNFYLAYATGRSYHSAR   49 (244)
T ss_dssp             CSEEEEECTBTTTBSCHHH-----------------------------H---HHHHHHHHTTGGGEEEEEECSSCHHHHH
T ss_pred             CceEEEEECcccCCCCCCC-----------------------------H---HHHHHHHHHHcCCCEEEEECCCCHHHHH
Confidence            5678889999999864310                             0   1244555555677888888888888888


Q ss_pred             HHHHHhcC
Q psy17244        111 AVADKLDA  118 (196)
Q Consensus       111 ~vl~~ldp  118 (196)
                      .++..+..
T Consensus        50 ~~~~~~~~   57 (244)
T d1s2oa1          50 ELQKQVGL   57 (244)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHcCC
Confidence            88877754

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.74  E-value=0.0063  Score=43.87  Aligned_cols=96  Identities=8%  Similarity=0.079  Sum_probs=65.3

Q ss_pred             EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE-ecCCCCC-----CC-CccccccccCCCC
Q psy17244         78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYY-RQHCTPE-----LG-SYTKDLSAISPDL  150 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~-r~~c~~~-----~~-~~~KdL~~l~~~~  150 (196)
                      .+...|+...+...+.+.+.+++.|.+....+..+...+.... .+...+. ...+...     .. ...+.+..++.++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  145 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY  145 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred             hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCch-hhcceeeeecccccccccccchhhHHHHHHHhcccc
Confidence            3677899999999999999999999999999999999888763 3333332 2221111     11 1233455567889


Q ss_pred             CcEEEEECCCccccCCCCceEeec
Q psy17244        151 SSIFILDNSPGAYRGFPDNAIPIK  174 (196)
Q Consensus       151 ~~~iiIDD~~~~~~~~~~N~I~v~  174 (196)
                      ++|+.|=|+..-..+-...|+.|.
T Consensus       146 ~eviaiGDg~NDi~Ml~~Ag~gIA  169 (206)
T d1rkua_         146 YRVIAAGDSYNDTTMLSEAHAGIL  169 (206)
T ss_dssp             CEEEEEECSSTTHHHHHHSSEEEE
T ss_pred             cceEEecCCccCHHHHHhCCccEE
Confidence            999999998875554444444444

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.63  E-value=0.0044  Score=45.58  Aligned_cols=51  Identities=12%  Similarity=0.059  Sum_probs=34.0

Q ss_pred             EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244         34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA  110 (196)
Q Consensus        34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~  110 (196)
                      .|+||+||||+.....+.                          .-...|-+.+.|+.+.+...++|-|..+...++
T Consensus         2 Li~~DlDGTL~~~~~~~~--------------------------~~~i~~~~~~~l~~l~~~~~v~i~TGR~~~~l~   52 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPE--------------------------ESYADAGLLSLISDLKERFDTYIVTGRSPEEIS   52 (229)
T ss_dssp             EEEEECBTTTBCCCSCGG--------------------------GCCCCHHHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             EEEEEecCCCCCCCCChh--------------------------hCCCCHHHHHHHHHHhhCCCEEEEcCCCHHHhh
Confidence            588999999996432110                          023457788888888877778777776655543

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.02  E-value=0.035  Score=43.83  Aligned_cols=100  Identities=15%  Similarity=0.164  Sum_probs=65.9

Q ss_pred             EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC---ceeeEEEEecCCCCC---CC----Cccc-----
Q psy17244         78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR---HILRRRYYRQHCTPE---LG----SYTK-----  141 (196)
Q Consensus        78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~---~~f~~~l~r~~c~~~---~~----~~~K-----  141 (196)
                      .+.+|||+.+|++.|. ....++|+|+|-..+++++++.+....   .+++..+.-+..+..   .+    .+.|     
T Consensus       133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~  212 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL  212 (291)
T ss_dssp             CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence            3789999999999998 789999999999999999999986542   245544432222211   00    1111     


Q ss_pred             -c--ccccCCCCCcEEEEECCCccccC-----CCCceEeeceecC
Q psy17244        142 -D--LSAISPDLSSIFILDNSPGAYRG-----FPDNAIPIKSWFS  178 (196)
Q Consensus       142 -d--L~~l~~~~~~~iiIDD~~~~~~~-----~~~N~I~v~~f~~  178 (196)
                       .  ......+.+++|+|=|+..-..+     +.+|++.+ .|-.
T Consensus       213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~i-gFL~  256 (291)
T d2bdua1         213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI-GYLN  256 (291)
T ss_dssp             TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEE-EEEC
T ss_pred             hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeee-ehhH
Confidence             1  11233467889999999985543     34566544 4433

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=95.00  E-value=0.0019  Score=49.13  Aligned_cols=88  Identities=8%  Similarity=0.022  Sum_probs=48.7

Q ss_pred             eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh----cCCCceeeEEEEecCCCCC--CCCccccccccCCCCCcE
Q psy17244         81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL----DARRHILRRRYYRQHCTPE--LGSYTKDLSAISPDLSSI  153 (196)
Q Consensus        81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l----dp~~~~f~~~l~r~~c~~~--~~~~~KdL~~l~~~~~~~  153 (196)
                      .-||+.+|++.+. +..+|+.-|+-+....+..++.|    +-...--.+++++..-...  +...+|+.       +=+
T Consensus        87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~y-------~I~  159 (209)
T d2b82a1          87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDK-------NIR  159 (209)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHT-------TEE
T ss_pred             cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCCchHHHHHHHHc-------CeE
Confidence            3579999999997 79999999998766555444444    2211112344444322111  11222322       225


Q ss_pred             EEEECCCccccCCCCceEeece
Q psy17244        154 FILDNSPGAYRGFPDNAIPIKS  175 (196)
Q Consensus       154 iiIDD~~~~~~~~~~N~I~v~~  175 (196)
                      +++.|+-.-+....+.|+...+
T Consensus       160 l~~GD~l~Df~aA~eagi~~iR  181 (209)
T d2b82a1         160 IFYGDSDNDITAARDVGARGIR  181 (209)
T ss_dssp             EEEESSHHHHHHHHHTTCEEEE
T ss_pred             EEecCCHHHHhHHHHcCCCceE
Confidence            7777777666544444444333

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=93.63  E-value=0.0086  Score=45.59  Aligned_cols=14  Identities=43%  Similarity=0.653  Sum_probs=12.0

Q ss_pred             eEEEEeCCCceeee
Q psy17244         33 KVLVLDLDETLIHS   46 (196)
Q Consensus        33 ~~LVLDLD~TLv~s   46 (196)
                      |.|++||||||+..
T Consensus         2 k~if~DlDGTL~~~   15 (260)
T d2rbka1           2 KALFFDIDGTLVSF   15 (260)
T ss_dssp             CEEEECSBTTTBCT
T ss_pred             eEEEEECCCCCcCC
Confidence            57899999999964

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=88.06  E-value=0.064  Score=40.15  Aligned_cols=16  Identities=6%  Similarity=0.108  Sum_probs=13.6

Q ss_pred             CeEEEEeCCCceeeee
Q psy17244         32 RKVLVLDLDETLIHSH   47 (196)
Q Consensus        32 k~~LVLDLD~TLv~s~   47 (196)
                      -+.||||+||||+++.
T Consensus         2 IkaviFD~dGTL~d~~   17 (257)
T d1swva_           2 IEAVIFAWAGTTVDYG   17 (257)
T ss_dssp             CCEEEECSBTTTBSTT
T ss_pred             cEEEEEcCCCCeEeCc
Confidence            3689999999999864

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.02  E-value=0.072  Score=38.43  Aligned_cols=81  Identities=14%  Similarity=0.157  Sum_probs=53.3

Q ss_pred             hhCceEEEEcCCchhhHHHHHHH-----------hcCCCceeeEEEEecCCC--CCCCCccccccccCCCCCcEEEEECC
Q psy17244         93 SQWYELVVFTASMEIYGAAVADK-----------LDARRHILRRRYYRQHCT--PELGSYTKDLSAISPDLSSIFILDNS  159 (196)
Q Consensus        93 ~~~yei~I~T~~~~~ya~~vl~~-----------ldp~~~~f~~~l~r~~c~--~~~~~~~KdL~~l~~~~~~~iiIDD~  159 (196)
                      .....+.+.|+........+...           ++.. .+|+.+++.+.-.  .+...|..-++++|.+++++++|+|+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~Fd~v~~~~~~~~KP~p~~f~~~~~~lg~~p~e~l~VgD~  185 (225)
T d2g80a1         107 KRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN-SYIDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDN  185 (225)
T ss_dssp             HHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG-GGCCEEECHHHHCCTTCHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred             hhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCc-cccceeeeccccCCCCChhHhHHHHHhcccCchhceeecCC
Confidence            46677889998877655544432           2333 5677766543222  12236788899999999999999999


Q ss_pred             CccccCCCCceEeec
Q psy17244        160 PGAYRGFPDNAIPIK  174 (196)
Q Consensus       160 ~~~~~~~~~N~I~v~  174 (196)
                      +.-.......|+...
T Consensus       186 ~~Dv~~A~~aG~~ti  200 (225)
T d2g80a1         186 PLELDAAAGVGIATG  200 (225)
T ss_dssp             HHHHHHHHTTTCEEE
T ss_pred             HHHHHHHHHcCCEEE
Confidence            876555555555443

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.90  E-value=0.086  Score=39.01  Aligned_cols=17  Identities=35%  Similarity=0.653  Sum_probs=14.1

Q ss_pred             CCeEEEEeCCCceeeee
Q psy17244         31 KRKVLVLDLDETLIHSH   47 (196)
Q Consensus        31 ~k~~LVLDLD~TLv~s~   47 (196)
                      +-+.++||+||||+++.
T Consensus         5 ~IKaviFD~dGTL~d~~   21 (247)
T d2gfha1           5 RVRAVFFDLDNTLIDTA   21 (247)
T ss_dssp             CCCEEEECCBTTTBCHH
T ss_pred             CCcEEEEcCCCCcCcCh
Confidence            55789999999999653

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.68  E-value=1.5  Score=29.82  Aligned_cols=40  Identities=8%  Similarity=-0.014  Sum_probs=36.7

Q ss_pred             eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244         80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR  119 (196)
Q Consensus        80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~  119 (196)
                      .+||++.+.++.|. ...+++|-|-....-|..+.+.++.+
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~   61 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD   61 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh
Confidence            46999999999998 46999999999999999999999875

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.49  E-value=0.096  Score=38.47  Aligned_cols=39  Identities=8%  Similarity=0.050  Sum_probs=22.8

Q ss_pred             eCccHHHHHHHhh--hCceEEEEcCC------chhhHHHHHHHhcCC
Q psy17244         81 KRPHVDFFLDIVS--QWYELVVFTAS------MEIYGAAVADKLDAR  119 (196)
Q Consensus        81 ~RP~l~eFL~~l~--~~yei~I~T~~------~~~ya~~vl~~ldp~  119 (196)
                      -+......++.+.  ++|+.++.+..      .+..-..+++.++..
T Consensus       125 ~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~  171 (230)
T d1x42a1         125 DTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK  171 (230)
T ss_dssp             CHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC
T ss_pred             ccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhccc
Confidence            3445566666643  66787776531      235566777777543

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=85.16  E-value=0.16  Score=36.92  Aligned_cols=17  Identities=24%  Similarity=0.364  Sum_probs=13.7

Q ss_pred             CCCeEEEEeCCCceeee
Q psy17244         30 VKRKVLVLDLDETLIHS   46 (196)
Q Consensus        30 ~~k~~LVLDLD~TLv~s   46 (196)
                      ..-++++||+||||+++
T Consensus         5 ~~i~~vlfD~dGTl~~~   21 (253)
T d1zs9a1           5 AEVTVILLDIEGTTTPI   21 (253)
T ss_dssp             TTCCEEEECCBTTTBCH
T ss_pred             CCCCEEEEeCcCCCccc
Confidence            35569999999999853

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.22  E-value=0.13  Score=36.90  Aligned_cols=15  Identities=20%  Similarity=0.308  Sum_probs=12.8

Q ss_pred             CeEEEEeCCCceeee
Q psy17244         32 RKVLVLDLDETLIHS   46 (196)
Q Consensus        32 k~~LVLDLD~TLv~s   46 (196)
                      -.+++||+||||+.+
T Consensus         3 ~~~~lfD~dGTl~d~   17 (225)
T d2g80a1           3 YSTYLLDIEGTVCPI   17 (225)
T ss_dssp             CSEEEECCBTTTBCT
T ss_pred             CCEEEEcCCCCCccc
Confidence            358999999999875

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.45  E-value=2  Score=30.36  Aligned_cols=30  Identities=7%  Similarity=0.177  Sum_probs=24.1

Q ss_pred             EeeCccHHHHHHHhhh--CceEEEEcCCchhh
Q psy17244         79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIY  108 (196)
Q Consensus        79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~y  108 (196)
                      ...=||+.+.+..|++  .++++|-|+....+
T Consensus        73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~  104 (195)
T d1q92a_          73 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMF  104 (195)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred             CCcccCHHHHHHHHhhccCccceEEccccccC
Confidence            4556999999999984  67899999987554

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=80.77  E-value=0.64  Score=37.22  Aligned_cols=89  Identities=12%  Similarity=0.039  Sum_probs=60.9

Q ss_pred             eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeE--EEEecCC-----------CCCCC---Cccc--
Q psy17244         81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRR--RYYRQHC-----------TPELG---SYTK--  141 (196)
Q Consensus        81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~--~l~r~~c-----------~~~~~---~~~K--  141 (196)
                      .||++.++|+.|. .++.++|.|...+..|..+++.++.. .+|..  +.+.+..           ...+.   .+.+  
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~-~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~  294 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL-PYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL  294 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG-GGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-ccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence            4569999999998 78999999999999999999999876 45532  3322211           11111   1111  


Q ss_pred             ------------cccccCCCCCcEEEEECCCccccCCCCce
Q psy17244        142 ------------DLSAISPDLSSIFILDNSPGAYRGFPDNA  170 (196)
Q Consensus       142 ------------dL~~l~~~~~~~iiIDD~~~~~~~~~~N~  170 (196)
                                  ..+.++.+++.+++|-|+..-.......+
T Consensus       295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag  335 (380)
T d1qyia_         295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG  335 (380)
T ss_dssp             HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHT
T ss_pred             HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCC
Confidence                        12345678899999999997555444444