Psyllid ID: psy17283

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-----
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLPAPHESADIQ
cccHHHHHHHHHHcccccccccccccccccccEEccccccccccHHHcccccccHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccccHHHHccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHcccccHHHHccHHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccEEccccccHHHHHHcccccEEEEcccHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccHHcccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHccEEEEcccccccccccHHHHcccccccHHHccHHHHHHccccHHHHHcccccccccccccccHHHHHccccHHHHHHHHHcHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccccccHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccc
cHHHHHHHHHHHHccccEEEEEEcccccccEEEEEccEEEEEccccHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHHHEEEEcccccHHHccEEEHHHHHHHcHHHHHHHHHHHHHHHEEccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHccccccHHHEEEEHHHcccEEEEcccccHHHHHHHHcHHHcEEccccHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHEEEEcccccHHHccEEEHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccEEcccccEEEHHHHHHHHcccEEEccHHHHHHHHHcccHHHHHHcHHHEEEccccEccHHHHHHccHHHHHHHHHHHccHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcHHHHHHHHHHHHcccHHHEHHHHHHHHHHHccccccccccccccccccHcc
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQkikngeqteepddwlryvndgDYIQAVLDRNLAENisrvlypndnnfggkelRLKQEYFMCAATLQDIIRRFRTSKSvaeikdksafdkfpeKVAIQLndthpslaipELMRVLVDVEglewdkawditVKTCAytnhtvlpealerwpVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNrikknpkgkftprtimiggkaapgyytAKKIIKLICSVARvvnndpdvgdkLKVVFLLNGaltigtldgaNVEMAEEMGNDNIFIFGMTVDQVEELKkkgydapsyynanpeLKLVVDQItngffspenpdefKDLSDILLKwdsenpidslqaWDITVktcaytnhtvlpealerwpVTLMENLLPRHMQIIYHINFLHLQNVLakfpndldRMRRMSLIeedgdkrvnMAHLSIVGSHAVNGVAFIHSEIIKHDIFrdfyeltpekfqnktngitprrwlllcnPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIassgkfssdrTITEYAREIwgvepsyeklpaphesadiq
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVaeikdksafdkfpEKVAIQLndthpslaipELMRVLVDVEGLEWDKAWDITVKTCAYTNHtvlpealerWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITlynrikknpkgkftprtimiggkaapGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFqnktngitprrWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIAssgkfssdrTITEYAREIWgvepsyeklpaphesadiq
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLPAPHESADIQ
***AACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVE****************
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLPAP*******
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLP*********
MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLPAPHES****
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iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLPAPHESADIQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query635 2.2.26 [Sep-21-2011]
Q9XTL9 844 Glycogen phosphorylase OS yes N/A 0.262 0.197 0.730 3e-92
Q9WUB3 842 Glycogen phosphorylase, m yes N/A 0.344 0.260 0.649 1e-81
P09811 850 Glycogen phosphorylase, l no N/A 0.319 0.238 0.681 1e-80
P11217 842 Glycogen phosphorylase, m yes N/A 0.325 0.245 0.677 1e-80
Q5MIB5 851 Glycogen phosphorylase, l N/A N/A 0.467 0.349 0.503 1e-80
Q8HXW4 842 Glycogen phosphorylase, m N/A N/A 0.325 0.245 0.677 1e-80
P09812 842 Glycogen phosphorylase, m yes N/A 0.344 0.260 0.644 2e-80
Q0VCM4 851 Glycogen phosphorylase, l yes N/A 0.543 0.405 0.456 2e-80
P00489 843 Glycogen phosphorylase, m yes N/A 0.344 0.259 0.635 2e-80
Q9ET01 850 Glycogen phosphorylase, l no N/A 0.319 0.238 0.671 8e-80
>sp|Q9XTL9|PYG_DROME Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2 Back     alignment and function desciption
 Score =  340 bits (871), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 149/204 (73%), Positives = 186/204 (91%)

Query: 380 QAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDL 439
           +AWDITV++CAYTNHTVLPEALERWPV+L+E++LPRH+QIIYHINFLH++NV  KFP+DL
Sbjct: 364 KAWDITVRSCAYTNHTVLPEALERWPVSLLESILPRHLQIIYHINFLHMENVKKKFPDDL 423

Query: 440 DRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNK 499
           DRMRRMS++EEDG+KR+NMAHLSIVGSHAVNGVA IHS+I+K  +F DFYE+ P+KFQNK
Sbjct: 424 DRMRRMSMVEEDGEKRINMAHLSIVGSHAVNGVAAIHSQILKDSLFHDFYEMEPQKFQNK 483

Query: 500 TNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENK 559
           TNGITPRRWLLLCNP L+D+IAEKIG++W +HL+QL  LK++AKDP FQR V +VKQENK
Sbjct: 484 TNGITPRRWLLLCNPGLSDLIAEKIGDEWPVHLDQLVALKKWAKDPNFQRNVARVKQENK 543

Query: 560 MKLAQYIEKEYHIKVNAASIFDMQ 583
           +KLA  +EK+Y +K+N +S+FD+Q
Sbjct: 544 LKLAAILEKDYGVKINPSSMFDIQ 567
Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1
>sp|Q9WUB3|PYGM_MOUSE Glycogen phosphorylase, muscle form OS=Mus musculus GN=Pygm PE=1 SV=3 Back     alignment and function description
>sp|P09811|PYGL_RAT Glycogen phosphorylase, liver form OS=Rattus norvegicus GN=Pygl PE=1 SV=5 Back     alignment and function description
>sp|P11217|PYGM_HUMAN Glycogen phosphorylase, muscle form OS=Homo sapiens GN=PYGM PE=1 SV=6 Back     alignment and function description
>sp|Q5MIB5|PYGL_SHEEP Glycogen phosphorylase, liver form OS=Ovis aries GN=PYGL PE=2 SV=3 Back     alignment and function description
>sp|Q8HXW4|PYGM_MACFA Glycogen phosphorylase, muscle form OS=Macaca fascicularis GN=PYGM PE=2 SV=3 Back     alignment and function description
>sp|P09812|PYGM_RAT Glycogen phosphorylase, muscle form OS=Rattus norvegicus GN=Pygm PE=2 SV=5 Back     alignment and function description
>sp|Q0VCM4|PYGL_BOVIN Glycogen phosphorylase, liver form OS=Bos taurus GN=PYGL PE=2 SV=1 Back     alignment and function description
>sp|P00489|PYGM_RABIT Glycogen phosphorylase, muscle form OS=Oryctolagus cuniculus GN=PYGM PE=1 SV=3 Back     alignment and function description
>sp|Q9ET01|PYGL_MOUSE Glycogen phosphorylase, liver form OS=Mus musculus GN=Pygl PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
444520417 756 Glycogen phosphorylase, brain form [Tupa 0.524 0.440 0.498 1e-106
56606106 967 liver glycogen phosphorylase [Danio reri 0.440 0.289 0.539 3e-96
383864340 1322 PREDICTED: LOW QUALITY PROTEIN: glycogen 0.262 0.126 0.779 4e-96
328781343 1302 PREDICTED: LOW QUALITY PROTEIN: glycogen 0.262 0.128 0.769 2e-95
380012845 1306 PREDICTED: LOW QUALITY PROTEIN: glycogen 0.262 0.127 0.769 2e-95
345495404 1066 PREDICTED: LOW QUALITY PROTEIN: glycogen 0.344 0.205 0.728 4e-95
350410146 1302 PREDICTED: glycogen phosphorylase-like [ 0.262 0.128 0.774 4e-95
443682290 844 glycogen phosphorylase, partial [Cotesia 0.344 0.259 0.706 2e-92
91081301 849 PREDICTED: similar to AGAP007939-PA [Tri 0.262 0.196 0.754 7e-92
195386098 842 GJ17151 [Drosophila virilis] gi|19414819 0.262 0.198 0.754 1e-91
>gi|444520417|gb|ELV12969.1| Glycogen phosphorylase, brain form [Tupaia chinensis] Back     alignment and taxonomy information
 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/441 (49%), Positives = 274/441 (62%), Gaps = 108/441 (24%)

Query: 39  QTEEPDDW-LRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATL 97
             + P+D+ L+  N GDYI+AVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATL
Sbjct: 243 SAKAPNDFKLQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATL 302

Query: 98  QDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKA 157
           QDIIRRF++SK       +++F+ FP+KVAIQLNDTHP+L+IPELMR+LVDVE ++WDKA
Sbjct: 303 QDIIRRFKSSKFGCRDPVRTSFETFPDKVAIQLNDTHPALSIPELMRILVDVEKVDWDKA 362

Query: 158 WDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQ------------ 205
           W+IT KTCAYTNHTVLPEALERWPV++ E LLPRH+ IIY IN  HL             
Sbjct: 363 WEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLDIIYAINQRHLDHVAALFPGDVDR 422

Query: 206 ------------------------------VKRIH-EYKRQLLNA---LHI--------- 222
                                         V RIH E  +Q + +   +H+         
Sbjct: 423 LRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVKSRRFVHVGCSCLLTPS 482

Query: 223 ---ITLY-NRIKKNPKGKFTPRTIMIGGK-----------AAPGYYTAKKIIKLICSVAR 267
              + LY +RIKK+P   F PRT+MIGGK           AAPGY+ AK IIKL+ S+  
Sbjct: 483 QCLLNLYAHRIKKDPGKAFVPRTVMIGGKTQYGVTSSSFQAAPGYHMAKMIIKLVTSIGN 542

Query: 268 VVNNDPDVGDKLKVVFL-------------------------------------LNGALT 290
           VVN+DP VGD+LKV+FL                                     LNGALT
Sbjct: 543 VVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALT 602

Query: 291 IGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNG 350
           IGT+DGANVEMAEE G +N+FIFG+ V+ VE L +KGY+A  YY   PEL+  VDQI++G
Sbjct: 603 IGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAREYYERLPELRQAVDQISSG 662

Query: 351 FFSPENPDEFKDLSDILLKWD 371
           FFSP++PD F+D+ ++L+  D
Sbjct: 663 FFSPKDPDCFRDVVNMLMYHD 683

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota
>gi|56606106|ref|NP_001008538.1| liver glycogen phosphorylase [Danio rerio] gi|56078768|gb|AAH85616.1| Phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) [Danio rerio] Back     alignment and taxonomy information
>gi|383864340|ref|XP_003707637.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328781343|ref|XP_623386.2| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|380012845|ref|XP_003690485.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase-like [Apis florea] Back     alignment and taxonomy information
>gi|345495404|ref|XP_001601953.2| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350410146|ref|XP_003488962.1| PREDICTED: glycogen phosphorylase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|443682290|gb|AGC97435.1| glycogen phosphorylase, partial [Cotesia vestalis] Back     alignment and taxonomy information
>gi|91081301|ref|XP_968960.1| PREDICTED: similar to AGAP007939-PA [Tribolium castaneum] gi|270006093|gb|EFA02541.1| hypothetical protein TcasGA2_TC008246 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195386098|ref|XP_002051741.1| GJ17151 [Drosophila virilis] gi|194148198|gb|EDW63896.1| GJ17151 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query635
UNIPROTKB|Q0VCM4 851 PYGL "Glycogen phosphorylase, 0.551 0.411 0.465 8.2e-110
UNIPROTKB|P06737 847 PYGL "Glycogen phosphorylase, 0.321 0.240 0.666 9.2e-109
RGD|620687 850 Pygl "phosphorylase, glycogen, 0.549 0.410 0.458 3.1e-110
UNIPROTKB|F1RQQ7 730 PYGB "Phosphorylase" [Sus scro 0.341 0.297 0.608 1.7e-103
MGI|MGI:97829 850 Pygl "liver glycogen phosphory 0.549 0.410 0.453 1.3e-109
UNIPROTKB|F1SFF8 854 PYGL "Phosphorylase" [Sus scro 0.551 0.409 0.460 1.2e-108
UNIPROTKB|Q3B7M9 843 PYGB "Glycogen phosphorylase, 0.343 0.258 0.619 6.4e-106
UNIPROTKB|F1NAD9 856 PYGL "Phosphorylase" [Gallus g 0.325 0.241 0.695 1.7e-113
FB|FBgn0004507 844 GlyP "Glycogen phosphorylase" 0.321 0.241 0.730 6.4e-132
UNIPROTKB|F1PB77 870 PYGL "Phosphorylase" [Canis lu 0.507 0.370 0.488 5.4e-96
UNIPROTKB|Q0VCM4 PYGL "Glycogen phosphorylase, liver form" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 769 (275.8 bits), Expect = 8.2e-110, Sum P(3) = 8.2e-110
 Identities = 176/378 (46%), Positives = 233/378 (61%)

Query:   223 ITLYNRIKKNPKG-KFTPRTIMIG---GKAAPGYYTAKKIIKLICSVARVVNN----DPD 274
             +  Y R++    G K+T   +++        PGY         + S AR  N+    D +
Sbjct:   201 VHFYGRVEHTEAGTKWTDTQVVLALPYDTPVPGYLNNTVNTMRLWS-ARAPNDFNLRDFN 259

Query:   275 VGDKLKVVFLLNGALTIGTLDGANVEMAE--EMG-NDNIFIFGMTV-DQVEELKKKGYDA 330
             VGD ++ V   N A  I  +   N    E  E+      F+   T+ D +   K   +D+
Sbjct:   260 VGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDVIRRFKASKFDS 319

Query:   331 PSY----YNANPELKLVVDQITNGFFSPENPDEFKDLSDI-LLKWDSENPIDSLQAWDIT 385
              +     ++A P+   V  Q+ +   S   P+  +   DI  L W         +AW+IT
Sbjct:   320 SNSTKTAFDAFPDQ--VAIQLNDTHPSLAIPELMRIFVDIEKLPWS--------KAWEIT 369

Query:   386 VKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDLDRMRRM 445
              KT AYTNHTVLPEALERWPV L+E LLPRH+QIIY IN  HL  + A FP D+DR+RRM
Sbjct:   370 QKTFAYTNHTVLPEALERWPVELVEKLLPRHLQIIYEINQKHLDKIAALFPKDVDRLRRM 429

Query:   446 SLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITP 505
             SLIEE+G KR+NMAHL IVGSHAVNGVA IHS+I+K  +F+DF EL P+KFQNKTNGITP
Sbjct:   430 SLIEEEGGKRINMAHLCIVGSHAVNGVAKIHSDIVKTQVFKDFSELEPDKFQNKTNGITP 489

Query:   506 RRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQY 565
             RRWLLLCNP LA++IAEKIGED++  L QL +L  +  D  F RE+  VKQENK+K +Q+
Sbjct:   490 RRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLNSFLGDDIFLREISNVKQENKLKFSQF 549

Query:   566 IEKEYHIKVNAASIFDMQ 583
             +EKEY +K+N +S+FD+Q
Sbjct:   550 LEKEYKVKINPSSMFDVQ 567
GO:0042593 "glucose homeostasis" evidence=IEA
GO:0032052 "bile acid binding" evidence=IEA
GO:0019842 "vitamin binding" evidence=IEA
GO:0016208 "AMP binding" evidence=IEA
GO:0008184 "glycogen phosphorylase activity" evidence=IEA
GO:0008144 "drug binding" evidence=IEA
GO:0005977 "glycogen metabolic process" evidence=IEA
GO:0005886 "plasma membrane" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0002060 "purine nucleobase binding" evidence=IEA
GO:0030170 "pyridoxal phosphate binding" evidence=IEA
UNIPROTKB|P06737 PYGL "Glycogen phosphorylase, liver form" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620687 Pygl "phosphorylase, glycogen, liver" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQQ7 PYGB "Phosphorylase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:97829 Pygl "liver glycogen phosphorylase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFF8 PYGL "Phosphorylase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q3B7M9 PYGB "Glycogen phosphorylase, brain form" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1NAD9 PYGL "Phosphorylase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0004507 GlyP "Glycogen phosphorylase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1PB77 PYGL "Phosphorylase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.766
4th Layer2.4.1.10.824

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
cd04300 797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 1e-125
pfam00343 712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 1e-108
TIGR02093 794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 1e-104
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 2e-97
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 5e-95
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 4e-83
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 2e-82
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 3e-81
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 2e-80
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 1e-74
COG0058 750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 1e-70
PRK14985 798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 2e-66
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 3e-64
PRK14986 815 PRK14986, PRK14986, glycogen phosphorylase; Provis 4e-64
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 7e-60
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 3e-55
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 6e-52
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 2e-51
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 1e-26
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 3e-23
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 3e-22
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 3e-18
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 9e-17
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 6e-15
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 3e-13
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 6e-12
TIGR02094 601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 3e-11
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 3e-10
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 6e-08
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 2e-07
cd04299 778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 3e-05
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 1e-04
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 0.001
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information 
 Score =  387 bits (998), Expect = e-125
 Identities = 129/216 (59%), Positives = 164/216 (75%), Gaps = 8/216 (3%)

Query: 368 LKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLH 427
           L WD        +AWDIT KT AYTNHT+LPEALE+WPV L E LLPRH++IIY IN   
Sbjct: 328 LDWD--------EAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRF 379

Query: 428 LQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRD 487
           L+ V AK+P D DR+RRMS+IEE G+K+V MAHL+IVGSH+VNGVA +HSE++K  +F+D
Sbjct: 380 LEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKD 439

Query: 488 FYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAF 547
           FYEL PEKF NKTNGITPRRWLL  NP L+ +I E IG+DW+  L+QL +L+ +A DPAF
Sbjct: 440 FYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAF 499

Query: 548 QREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQ 583
            +E   +KQ NK +LA YI+K   ++V+  S+FD+Q
Sbjct: 500 LKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQ 535

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 797
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 635
KOG2099|consensus843 100.0
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 100.0
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 100.0
PRK14986815 glycogen phosphorylase; Provisional 100.0
PRK14985798 maltodextrin phosphorylase; Provisional 100.0
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 100.0
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR02094 601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
KOG2099|consensus 843 100.0
TIGR02093 794 P_ylase glycogen/starch/alpha-glucan phosphorylase 100.0
cd04300 797 GT1_Glycogen_Phosphorylase This is a family of oli 100.0
PRK14986 815 glycogen phosphorylase; Provisional 100.0
PRK14985 798 maltodextrin phosphorylase; Provisional 100.0
PF00343 713 Phosphorylase: Carbohydrate phosphorylase; InterPr 100.0
COG0058 750 GlgP Glucan phosphorylase [Carbohydrate transport 100.0
cd04299 778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 99.92
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 97.11
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 96.49
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 94.5
PRK00654466 glgA glycogen synthase; Provisional 94.28
PRK14098489 glycogen synthase; Provisional 94.23
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 90.25
PRK14098489 glycogen synthase; Provisional 89.94
PRK00654466 glgA glycogen synthase; Provisional 89.74
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 88.42
PRK14099 485 glycogen synthase; Provisional 87.36
>KOG2099|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.2e-134  Score=1077.68  Aligned_cols=373  Identities=76%  Similarity=1.221  Sum_probs=366.4

Q ss_pred             CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283          2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY--------------------------------   49 (635)
Q Consensus         2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~--------------------------------   49 (635)
                      ||||||||||||||+|++||||||+||+|+|+|.+|||+|.||+||+.                                
T Consensus       139 RLAaCFlDSMATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g~kWid  218 (843)
T KOG2099|consen  139 RLAACFLDSMATLGLPAYGYGLRYEYGIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDGSKWID  218 (843)
T ss_pred             HHHHHHHHHHhhcCCccccccceeehhhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCcceeec
Confidence            999999999999999999999999999999999999999999999987                                


Q ss_pred             ---------------------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchhhhhhhH
Q psy17283         50 ---------------------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEY   90 (635)
Q Consensus        50 ---------------------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~lRl~Qe~   90 (635)
                                                             ||.|+|..|+++.+.+||||++|||+|+..+||+|||||||
T Consensus       219 ~q~V~A~~YD~PvPGyk~n~vntlRLWsaka~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqy  298 (843)
T KOG2099|consen  219 TQVVLAMPYDTPVPGYKNNTVNTLRLWSAKAPNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQY  298 (843)
T ss_pred             ceeEEEeccCCCCCCcccCcceeeeeeccCCCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhh
Confidence                                                   79999999999999999999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcccceecc
Q psy17283         91 FMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNH  170 (635)
Q Consensus        91 ~l~~~~~~~ii~~~~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~~~~t~H  170 (635)
                      |+|+||+|||||||+.+..|++.+++..+++||+++++|||||||++|||||||+|+|.+|++|++||+++.++|+||||
T Consensus       299 f~caAtLqDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNH  378 (843)
T KOG2099|consen  299 FLCAATLQDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNH  378 (843)
T ss_pred             hhhHHHHHHHHHHHhhcccCcccccccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccc
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCHHHHHhhhhhhHHHHHhhccccc----------------------------------------------
Q psy17283        171 TVLPEALERWPVTLMENLLPRHMQIIYHINFLHL----------------------------------------------  204 (635)
Q Consensus       171 T~~~e~~e~~~~~l~~~~lpr~~~ii~~~n~~~~----------------------------------------------  204 (635)
                      |++|||+|+||+++++++||||++||++||.+|+                                              
T Consensus       379 TVlpEALErWp~~L~e~LLPRHleIIy~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa  458 (843)
T KOG2099|consen  379 TVLPEALERWPVSLMEKLLPRHLEIIYEINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVA  458 (843)
T ss_pred             cccHHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHH
Confidence            9999999999999999999999999999999988                                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy17283        205 --------------------------------------------------------------------------------  204 (635)
Q Consensus       205 --------------------------------------------------------------------------------  204 (635)
                                                                                                      
T Consensus       459 ~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige~~i~dl~~l~~L~~~a~d~~f~~~~a~  538 (843)
T KOG2099|consen  459 EIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGEEWITDLDQLTKLRKFADDEEFQREWAK  538 (843)
T ss_pred             HHHHHHHHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhhHhhhhHHHHHHHHHhcccHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -----------------------------cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHH
Q psy17283        205 -----------------------------QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTA  255 (635)
Q Consensus       205 -----------------------------~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~a  255 (635)
                                                   |+||+||||||+||+||+++||++||++|.+.++||++||||||+|+|++|
T Consensus       539 vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mA  618 (843)
T KOG2099|consen  539 VKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMA  618 (843)
T ss_pred             HHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHH
Confidence                                         999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCcCcCCcceEEEE-------------------------------------ecCceeeccccCcc
Q psy17283        256 KKIIKLICSVARVVNNDPDVGDKLKVVFL-------------------------------------LNGALTIGTLDGAN  298 (635)
Q Consensus       256 k~iIk~I~~~a~~innd~~i~~~lkvvfl-------------------------------------~NG~l~l~tlDG~~  298 (635)
                      |.|||||++||++|||||.|+++|||||+                                     |||+|++|||||+|
T Consensus       619 K~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGAN  698 (843)
T KOG2099|consen  619 KLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGAN  698 (843)
T ss_pred             HHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccc
Confidence            99999999999999999999999999999                                     99999999999999


Q ss_pred             HHHHHhhcCcceeecCCchhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCC
Q psy17283        299 VEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSEN  374 (635)
Q Consensus       299 ~E~~~~vG~eN~~~fG~~~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~  374 (635)
                      +|+++++|+||+|+||+++++|.++++.||++.++|..+|++++|+++|.+|.||+.+|..|.++++.|+.+|+|.
T Consensus       699 VEm~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~hD~f~  774 (843)
T KOG2099|consen  699 VEMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYHDYFL  774 (843)
T ss_pred             hHHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhccceEE
Confidence            9999999999999999999999999999999999999999999999999999999999999999999888766653

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>KOG2099|consensus Back     alignment and domain information
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
1z8d_A 842 Crystal Structure Of Human Muscle Glycogen Phosphor 8e-82
1z8d_A842 Crystal Structure Of Human Muscle Glycogen Phosphor 3e-14
4ej2_A 825 Crystal Structure Of Gpb In Complex With Dk10 Lengt 1e-81
4ej2_A825 Crystal Structure Of Gpb In Complex With Dk10 Lengt 1e-12
2gm9_A 825 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-81
2gm9_A825 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-12
2ffr_A 825 Crystallographic Studies On N-Azido-Beta-D-Glucopyr 1e-81
2ffr_A825 Crystallographic Studies On N-Azido-Beta-D-Glucopyr 1e-12
1pyg_A 842 Structural Basis For The Activation Of Glycogen Pho 2e-81
1pyg_A842 Structural Basis For The Activation Of Glycogen Pho 5e-14
2g9q_A 842 The Crystal Structure Of The Glycogen Phosphorylase 2e-81
2g9q_A842 The Crystal Structure Of The Glycogen Phosphorylase 5e-14
1c8l_A 842 Synergistic Inhibition Of Glycogen Phosphorylase A 2e-81
1c8l_A842 Synergistic Inhibition Of Glycogen Phosphorylase A 5e-14
2gj4_A 824 Structure Of Rabbit Muscle Glycogen Phosphorylase I 2e-81
2gj4_A824 Structure Of Rabbit Muscle Glycogen Phosphorylase I 3e-12
3nc4_A 841 The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz 2e-81
3nc4_A841 The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz 5e-14
2pyd_A 843 The Crystal Structure Of Glycogen Phosphorylase In 2e-81
2pyd_A843 The Crystal Structure Of Glycogen Phosphorylase In 5e-14
1noi_A 842 Complex Of Glycogen Phosphorylase With A Transition 3e-81
1noi_A842 Complex Of Glycogen Phosphorylase With A Transition 5e-14
1gpa_A 842 Structural Mechanism For Glycogen Phosphorylase Con 3e-81
1gpa_A842 Structural Mechanism For Glycogen Phosphorylase Con 5e-14
1c50_A 830 Identification And Structural Characterization Of A 3e-81
1c50_A830 Identification And Structural Characterization Of A 5e-14
1z6p_A 842 Glycogen Phosphorylase Amp Site Inhibitor Complex L 3e-81
1z6p_A842 Glycogen Phosphorylase Amp Site Inhibitor Complex L 5e-14
7gpb_A 842 Structural Mechanism For Glycogen Phosphorylase Con 3e-81
7gpb_A842 Structural Mechanism For Glycogen Phosphorylase Con 5e-14
1abb_A 828 Control Of Phosphorylase B Conformation By A Modifi 3e-81
1abb_A828 Control Of Phosphorylase B Conformation By A Modifi 1e-13
1fa9_A 846 Human Liver Glycogen Phosphorylase A Complexed With 1e-80
1fa9_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-08
1fc0_A 846 Human Liver Glycogen Phosphorylase Complexed With N 1e-80
1fc0_A846 Human Liver Glycogen Phosphorylase Complexed With N 1e-08
1em6_A 847 Human Liver Glycogen Phosphorylase A Complexed With 1e-80
1em6_A847 Human Liver Glycogen Phosphorylase A Complexed With 1e-08
3dds_A 848 Crystal Structure Of Glycogen Phosphorylase Complex 1e-80
3dds_A848 Crystal Structure Of Glycogen Phosphorylase Complex 1e-08
2qll_A 847 Human Liver Glycogen Phosphorylase- Gl Complex Leng 1e-80
2qll_A847 Human Liver Glycogen Phosphorylase- Gl Complex Leng 1e-08
2zb2_A 849 Human Liver Glycogen Phosphorylase A Complexed With 1e-80
2zb2_A849 Human Liver Glycogen Phosphorylase A Complexed With 1e-08
1xoi_A 846 Human Liver Glycogen Phosphorylase A Complexed With 1e-80
1xoi_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-08
3ceh_A 809 Human Liver Glycogen Phosphorylase (Tense State) In 2e-80
3ceh_A809 Human Liver Glycogen Phosphorylase (Tense State) In 8e-08
1ygp_B 879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 6e-51
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 1e-04
1l5v_A 796 Crystal Structure Of The Maltodextrin Phosphorylase 4e-49
1qm5_A 796 Phosphorylase Recognition And Phosphorylysis Of Its 8e-49
1ahp_A 797 Oligosaccharide Substrate Binding In Escherichia Co 4e-47
2ecp_A 796 The Crystal Structure Of The E. Coli Maltodextrin P 4e-47
2c4m_A 796 Starch Phosphorylase: Structural Studies Explain Ox 2e-37
2c4m_A796 Starch Phosphorylase: Structural Studies Explain Ox 3e-06
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 Back     alignment and structure 
Iteration: 1

 Score =  301 bits (770), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 141/208 (67%), Positives = 168/208 (80%)
Query: 376 IDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKF 435
           +D  +AWD+TV+TCAYTNHTVLPEALERWPV L+E LLPRH+QIIY IN   L  V A F
Sbjct: 360 MDWDKAWDVTVRTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAF 419
Query: 436 PNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEK 495
           P D+DR+RRMSL+EE   KR+NMAHL I GSHAVNGVA IHSEI+K  IF+DFYEL P K
Sbjct: 420 PGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHK 479
Query: 496 FQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVK 555
           FQNKTNGITPRRWL+LCNP LA+VIAE+IGED+I  L+QL +L  +  D AF R+V KVK
Sbjct: 480 FQNKTNGITPRRWLVLCNPGLAEVIAERIGEDFISDLDQLRKLLSFVDDEAFIRDVAKVK 539
Query: 556 QENKMKLAQYIEKEYHIKVNAASIFDMQ 583
           QENK+K A Y+E+EY + +N  S+FD+Q
Sbjct: 540 QENKLKFAAYLEREYKVHINPNSLFDIQ 567
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 Back     alignment and structure
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 Back     alignment and structure
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 Back     alignment and structure
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 Back     alignment and structure
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 Back     alignment and structure
>pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 Back     alignment and structure
>pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 Back     alignment and structure
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 Back     alignment and structure
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 Back     alignment and structure
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 Back     alignment and structure
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 Back     alignment and structure
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 Back     alignment and structure
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 Back     alignment and structure
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 Back     alignment and structure
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 Back     alignment and structure
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 Back     alignment and structure
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 Back     alignment and structure
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 Back     alignment and structure
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 Back     alignment and structure
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 Back     alignment and structure
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 Back     alignment and structure
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 Back     alignment and structure
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 Back     alignment and structure
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 Back     alignment and structure
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 Back     alignment and structure
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 Back     alignment and structure
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 Back     alignment and structure
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 Back     alignment and structure
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 Back     alignment and structure
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 Back     alignment and structure
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 Back     alignment and structure
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 Back     alignment and structure
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 Back     alignment and structure
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 Back     alignment and structure
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 Back     alignment and structure
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 Back     alignment and structure
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 Back     alignment and structure
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 Back     alignment and structure
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 Back     alignment and structure
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 Back     alignment and structure
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 Back     alignment and structure
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 Back     alignment and structure
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 Back     alignment and structure
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 Back     alignment and structure
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 Back     alignment and structure
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 Back     alignment and structure
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 Back     alignment and structure
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 Back     alignment and structure
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query635
2gj4_A 824 Glycogen phosphorylase, muscle form; transferase; 1e-127
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 1e-100
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 4e-97
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 7e-26
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 7e-19
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 1e-124
2c4m_A 796 Glycogen phosphorylase; allosteric control, phosph 1e-118
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 1e-94
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 4e-17
1l5w_A 796 Maltodextrin phosphorylase; enzymatic catalysis, s 1e-123
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 7e-98
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 4e-96
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 1e-26
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 2e-16
1ygp_A 879 Yeast glycogen phosphorylase; phosphorylated form, 1e-117
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 3e-97
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 2e-85
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 9e-27
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 5e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
 Score =  392 bits (1010), Expect = e-127
 Identities = 142/216 (65%), Positives = 169/216 (78%), Gaps = 8/216 (3%)

Query: 368 LKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLH 427
           L WD        +AW++TVKTCAYTNHTVLPEALERWPV L+E LLPRH+QIIY IN   
Sbjct: 348 LDWD--------KAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399

Query: 428 LQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRD 487
           L  V A FP D+DR+RRMSL+EE   KR+NMAHL I GSHAVNGVA IHSEI+K  IF+D
Sbjct: 400 LNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKD 459

Query: 488 FYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAF 547
           FYEL P KFQNKTNGITPRRWL+LCNP LA++IAE+IGE++I  L+QL +L  Y  D AF
Sbjct: 460 FYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAF 519

Query: 548 QREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQ 583
            R+V KVKQENK+K A Y+E+EY + +N  S+FD+Q
Sbjct: 520 IRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 100.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 100.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 100.0
1ygp_A 879 Yeast glycogen phosphorylase; phosphorylated form, 100.0
2gj4_A 824 Glycogen phosphorylase, muscle form; transferase; 100.0
1l5w_A 796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
2c4m_A 796 Glycogen phosphorylase; allosteric control, phosph 100.0
3vue_A 536 GBSS-I, granule-bound starch synthase 1, chloropla 82.21
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 635
d2gj4a1 824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 1e-67
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 4e-62
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 1e-51
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 6e-16
d1ygpa_ 876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 5e-60
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 2e-52
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 3e-50
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 2e-20
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 7e-14
d1l5wa_ 796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 3e-56
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 3e-56
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 3e-41
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 6e-19
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 2e-13
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  234 bits (597), Expect = 1e-67
 Identities = 139/204 (68%), Positives = 166/204 (81%)

Query: 380 QAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDL 439
           +AW++TVKTCAYTNHTVLPEALERWPV L+E LLPRH+QIIY IN   L  V A FP D+
Sbjct: 352 KAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDV 411

Query: 440 DRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNK 499
           DR+RRMSL+EE   KR+NMAHL I GSHAVNGVA IHSEI+K  IF+DFYEL P KFQNK
Sbjct: 412 DRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNK 471

Query: 500 TNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENK 559
           TNGITPRRWL+LCNP LA++IAE+IGE++I  L+QL +L  Y  D AF R+V KVKQENK
Sbjct: 472 TNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENK 531

Query: 560 MKLAQYIEKEYHIKVNAASIFDMQ 583
           +K A Y+E+EY + +N  S+FD+Q
Sbjct: 532 LKFAAYLEREYKVHINPNSLFDVQ 555
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query635
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 100.0
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 100.0
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 100.0
d2gj4a1 824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 100.0
d1ygpa_ 876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 100.0
d1l5wa_ 796 Maltodextrin phosphorylase (MALP) {Escherichia col 100.0
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 81.22
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.3e-115  Score=1003.19  Aligned_cols=375  Identities=72%  Similarity=1.161  Sum_probs=350.0

Q ss_pred             CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283          2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY--------------------------------   49 (635)
Q Consensus         2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~--------------------------------   49 (635)
                      ||||||||||||||+|++||||||+||||+|+|+||||+|.||+|+..                                
T Consensus       127 rLAgd~LkSaAdLglP~~G~GL~Y~~GyF~Q~I~dG~Q~E~~d~w~~~~~Pwe~~r~~~~~~v~f~g~v~~~~~~~~w~~  206 (824)
T d2gj4a1         127 RLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVD  206 (824)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSEEEES
T ss_pred             HHHHHHHHHHHhCCCCeEEEEcCcCCCCeEEEEECCeEEEcCCccccCCCCceeecccceeEEecCceeeecCccccccC
Confidence            899999999999999999999999999999999999999999999633                                


Q ss_pred             ---------------------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchhhhhhhH
Q psy17283         50 ---------------------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEY   90 (635)
Q Consensus        50 ---------------------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~lRl~Qe~   90 (635)
                                                             |+.|+|+.|++|++.+||||++|||+|++|+|+++||+|||
T Consensus       207 ~~~V~avpydv~i~g~~~~~vn~lRlW~a~~~~~f~~~~~~~G~~~~~lld~~~~eni~~~ly~~d~ly~G~~lRl~Qqy  286 (824)
T d2gj4a1         207 TQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEY  286 (824)
T ss_dssp             CEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHH
T ss_pred             ceEEEEEeeeeEEeeccCceeEEEEEEeeccCccccccccccCcHHHHHHhhcchhcchhccCCcccccCchHHHHHHHH
Confidence                                                   46899999999999999999999999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcccceecc
Q psy17283         91 FMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNH  170 (635)
Q Consensus        91 ~l~~~~~~~ii~~~~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~~~~t~H  170 (635)
                      |||+||+|||||+|++...|++..+..+++.||+++++||||||||+++|||||+|+|++|++|++||++|+++|+||||
T Consensus       287 ~l~~~g~~~ilr~~~~~~~~~~~~~~~~~~~~~~~~vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtH  366 (824)
T d2gj4a1         287 FVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNH  366 (824)
T ss_dssp             HHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECC
T ss_pred             HHHHHHHHHHHHHHHhcccccccccccchhhccccceeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEec
Confidence            99999999999999765333333334468899999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccCCHHHHHhhhhhhHHHHHhhccccc----------------------------------------------
Q psy17283        171 TVLPEALERWPVTLMENLLPRHMQIIYHINFLHL----------------------------------------------  204 (635)
Q Consensus       171 T~~~e~~e~~~~~l~~~~lpr~~~ii~~~n~~~~----------------------------------------------  204 (635)
                      ||+|||||+||+++++++||||++|+.+||.+|+                                              
T Consensus       367 Tpvpag~E~f~~~l~~~~lpr~~~ii~ei~~~fl~~~~~~~~~d~~~~~~l~ii~e~~~~~~~Ma~Lal~~S~~vNGVSk  446 (824)
T d2gj4a1         367 TVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVAR  446 (824)
T ss_dssp             CCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSH
T ss_pred             cCchHhcCccCHHHHHHHhHHHhhhhhhhHHHHHHHHHHHCCCcHHHHhhcccccccCCceeeHHHHHHHhchhHHHHHH
Confidence            9999999999999999999999999999987654                                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy17283        205 --------------------------------------------------------------------------------  204 (635)
Q Consensus       205 --------------------------------------------------------------------------------  204 (635)
                                                                                                      
T Consensus       447 lH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~~d~~~~~~~~~~  526 (824)
T d2gj4a1         447 IHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKV  526 (824)
T ss_dssp             HHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHH
T ss_pred             HHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhCCCHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             ----------------------------cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHH
Q psy17283        205 ----------------------------QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAK  256 (635)
Q Consensus       205 ----------------------------~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak  256 (635)
                                                  |||||||||||+||+++++++|.+|+++|+...+|+||||||||||+|.+||
T Consensus       527 k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK  606 (824)
T d2gj4a1         527 KQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAK  606 (824)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHH
T ss_pred             HHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHH
Confidence                                        9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCcCcCCcceEEEE-------------------------------------ecCceeeccccCccH
Q psy17283        257 KIIKLICSVARVVNNDPDVGDKLKVVFL-------------------------------------LNGALTIGTLDGANV  299 (635)
Q Consensus       257 ~iIk~I~~~a~~innd~~i~~~lkvvfl-------------------------------------~NG~l~l~tlDG~~~  299 (635)
                      +|||+|+++|++||+||.+++++|||||                                     |||+||||||||||+
T Consensus       607 ~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnv  686 (824)
T d2gj4a1         607 MIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANV  686 (824)
T ss_dssp             HHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred             HHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHH
Confidence            9999999999999999999999999999                                     999999999999999


Q ss_pred             HHHHhhcCcceeecCCchhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCC
Q psy17283        300 EMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPI  376 (635)
Q Consensus       300 E~~~~vG~eN~~~fG~~~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L  376 (635)
                      |++++||++|||+||.+.+++..+++++|+|.++|+.+|++++|+|+|.+|+|+++.++.|.+|+++|+++|.|+.+
T Consensus       687 Ei~~~vg~~N~~~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~  763 (824)
T d2gj4a1         687 EMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVF  763 (824)
T ss_dssp             HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTG
T ss_pred             HHHHhcCcccEEEeCCChhhhhHHhhcCCCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHHHhcCChhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988887555
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure