Psyllid ID: psy17304
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 119 | ||||||
| 347964870 | 1561 | AGAP000974-PA [Anopheles gambiae str. PE | 0.991 | 0.075 | 0.650 | 1e-43 | |
| 170057392 | 558 | ADAM [Culex quinquefasciatus] gi|1678768 | 1.0 | 0.213 | 0.669 | 3e-41 | |
| 321474826 | 795 | hypothetical protein DAPPUDRAFT_45366 [D | 0.974 | 0.145 | 0.646 | 1e-40 | |
| 242023457 | 1144 | ADAM 9 precursor, putative [Pediculus hu | 0.983 | 0.102 | 0.641 | 8e-40 | |
| 380020692 | 866 | PREDICTED: disintegrin and metalloprotei | 0.991 | 0.136 | 0.627 | 8e-40 | |
| 328784742 | 1365 | PREDICTED: hypothetical protein LOC55166 | 0.991 | 0.086 | 0.627 | 9e-40 | |
| 307208174 | 1250 | ADAM 11 [Harpegnathos saltator] | 0.991 | 0.094 | 0.635 | 1e-39 | |
| 157116248 | 583 | MIND-MELD/ADAM [Aedes aegypti] gi|108883 | 1.0 | 0.204 | 0.645 | 4e-39 | |
| 383851437 | 1339 | PREDICTED: disintegrin and metalloprotei | 0.974 | 0.086 | 0.637 | 1e-38 | |
| 340726609 | 1380 | PREDICTED: hypothetical protein LOC10064 | 1.0 | 0.086 | 0.605 | 1e-38 |
| >gi|347964870|ref|XP_309168.4| AGAP000974-PA [Anopheles gambiae str. PEST] gi|333466516|gb|EAA04951.4| AGAP000974-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/123 (65%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
Query: 2 VHKLCGNGVVDEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGH 61
+ K CGNG+V++DE+CDCGS +C + DPCCD ITCKLKKESQCA GPCCD C L+P G
Sbjct: 459 LRKNCGNGIVEDDEECDCGSALDCDKTDPCCDGITCKLKKESQCATGPCCDKCILKPPGV 518
Query: 62 ICREAKTECDLPEWCTGTSGECPADEFKKNGNPCNMR-----TGFCFNGFCPTVDVQCEE 116
ICR+A ECDLPE+C G SG+CP D KKNGNPC M TG+CFNG CPT QCE
Sbjct: 519 ICRDAHNECDLPEYCNGESGQCPPDVHKKNGNPCGMNSTGFSTGYCFNGVCPTQAAQCER 578
Query: 117 IWG 119
IWG
Sbjct: 579 IWG 581
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170057392|ref|XP_001864463.1| ADAM [Culex quinquefasciatus] gi|167876861|gb|EDS40244.1| ADAM [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|321474826|gb|EFX85790.1| hypothetical protein DAPPUDRAFT_45366 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
| >gi|242023457|ref|XP_002432150.1| ADAM 9 precursor, putative [Pediculus humanus corporis] gi|212517532|gb|EEB19412.1| ADAM 9 precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|380020692|ref|XP_003694214.1| PREDICTED: disintegrin and metalloproteinase domain-containing protein 11-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|328784742|ref|XP_624055.3| PREDICTED: hypothetical protein LOC551663 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307208174|gb|EFN85648.1| ADAM 11 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|157116248|ref|XP_001658401.1| MIND-MELD/ADAM [Aedes aegypti] gi|108883454|gb|EAT47679.1| AAEL001231-PA, partial [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|383851437|ref|XP_003701239.1| PREDICTED: disintegrin and metalloproteinase domain-containing protein 12-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|340726609|ref|XP_003401648.1| PREDICTED: hypothetical protein LOC100644271 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 119 | ||||||
| FB|FBgn0259110 | 1463 | mmd "mind-meld" [Drosophila me | 0.949 | 0.077 | 0.601 | 8.1e-41 | |
| UNIPROTKB|A8QL59 | 621 | A8QL59 "Zinc metalloproteinase | 0.949 | 0.181 | 0.539 | 3.5e-35 | |
| ZFIN|ZDB-GENE-060929-532 | 762 | adam28 "a disintegrin and meta | 0.949 | 0.148 | 0.547 | 5.1e-35 | |
| UNIPROTKB|Q10749 | 609 | Q10749 "Zinc metalloproteinase | 0.949 | 0.185 | 0.513 | 1.4e-34 | |
| UNIPROTKB|F1NU65 | 804 | ADAM28 "Uncharacterized protei | 0.941 | 0.139 | 0.535 | 3.4e-34 | |
| ZFIN|ZDB-GENE-070808-1 | 819 | adam8b "a disintegrin and meta | 0.949 | 0.137 | 0.495 | 4.6e-34 | |
| UNIPROTKB|B4DDY3 | 307 | ADAM28 "Disintegrin and metall | 0.949 | 0.368 | 0.530 | 7.4e-34 | |
| UNIPROTKB|E7EMU1 | 483 | ADAM28 "Disintegrin and metall | 0.949 | 0.233 | 0.530 | 7.4e-34 | |
| UNIPROTKB|H0YBG8 | 387 | ADAM28 "Disintegrin and metall | 0.949 | 0.291 | 0.530 | 7.4e-34 | |
| ZFIN|ZDB-GENE-040912-127 | 816 | adam9 "a disintegrin and metal | 0.949 | 0.138 | 0.535 | 1.6e-33 |
| FB|FBgn0259110 mmd "mind-meld" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 447 (162.4 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 71/118 (60%), Positives = 90/118 (76%)
Query: 6 CGNGVVDEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICRE 65
CGN VV+EDE+CDCG+ +EC D CCD ITCKLK E+QCA G CCD C+LRP +ICR+
Sbjct: 482 CGNKVVEEDEECDCGTFEEC-ALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRD 540
Query: 66 AKTECDLPEWCTGTSGECPADEFKKNGNPCNMR----TGFCFNGFCPTVDVQCEEIWG 119
+ ECDLPE+C G G+CP+D FKKNG+PC + +G+CF G+CPT+ +QCE IWG
Sbjct: 541 SNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWG 598
|
|
| UNIPROTKB|A8QL59 A8QL59 "Zinc metalloproteinase-disintegrin NaMP" [Naja atra (taxid:8656)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060929-532 adam28 "a disintegrin and metallopeptidase domain 28" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q10749 Q10749 "Zinc metalloproteinase mocarhagin" [Naja mossambica (taxid:8644)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NU65 ADAM28 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-070808-1 adam8b "a disintegrin and metalloproteinase domain 8b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4DDY3 ADAM28 "Disintegrin and metalloproteinase domain-containing protein 28" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E7EMU1 ADAM28 "Disintegrin and metalloproteinase domain-containing protein 28" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H0YBG8 ADAM28 "Disintegrin and metalloproteinase domain-containing protein 28" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040912-127 adam9 "a disintegrin and metalloproteinase domain 9" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 119 | |||
| pfam00200 | 76 | pfam00200, Disintegrin, Disintegrin | 5e-27 | |
| smart00050 | 75 | smart00050, DISIN, Homologues of snake disintegrin | 8e-23 | |
| pfam08516 | 117 | pfam08516, ADAM_CR, ADAM cysteine-rich | 5e-05 | |
| smart00608 | 137 | smart00608, ACR, ADAM Cysteine-Rich Domain | 1e-04 |
| >gnl|CDD|215784 pfam00200, Disintegrin, Disintegrin | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 5e-27
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 12 DEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICREAKTECD 71
+E E+CDCGS +EC +PCCDA TCKLK +QCA GPCCD CK +P G +CR A ECD
Sbjct: 1 EEGEECDCGSPEECQ--NPCCDATTCKLKPGAQCATGPCCDQCKFKPAGTVCRPASGECD 58
Query: 72 LPEWCTGTSGECPADEFK 89
LPE+CTG S ECP D +K
Sbjct: 59 LPEYCTGQSAECPPDVYK 76
|
Length = 76 |
| >gnl|CDD|214490 smart00050, DISIN, Homologues of snake disintegrins | Back alignment and domain information |
|---|
| >gnl|CDD|219879 pfam08516, ADAM_CR, ADAM cysteine-rich | Back alignment and domain information |
|---|
| >gnl|CDD|214743 smart00608, ACR, ADAM Cysteine-Rich Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 119 | |||
| KOG3607|consensus | 716 | 100.0 | ||
| smart00050 | 75 | DISIN Homologues of snake disintegrins. Snake disi | 99.96 | |
| PF00200 | 76 | Disintegrin: Disintegrin; InterPro: IPR001762 Disi | 99.96 | |
| KOG3658|consensus | 764 | 99.95 | ||
| TIGR02232 | 38 | myxo_disulf_rpt Myxococcus cysteine-rich repeat. T | 96.85 | |
| PF13948 | 47 | DUF4215: Domain of unknown function (DUF4215) | 93.22 |
| >KOG3607|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=294.67 Aligned_cols=116 Identities=54% Similarity=1.260 Sum_probs=113.5
Q ss_pred CCCcccCCceeCCCCCCCCCcCccCCCCCCCCcccCccccCCcCCCCCCCCCCcccCCCCccccCCCCCCCCCcccCCCC
Q psy17304 2 VHKLCGNGVVDEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICREAKTECDLPEWCTGTSG 81 (119)
Q Consensus 2 ~~~~CGNgivE~gEeCDCG~~~~C~~~d~CC~~~~C~lk~ga~Cs~g~CC~~C~~~~~g~~Cr~~~~~Cd~~e~C~G~s~ 81 (119)
+.++|||||||+|||||||++++|. ++||+++||||+++|+|+.|+||++|+|+|+|++||++.++||+||||+|+|+
T Consensus 397 ~~~~CGNg~vE~gEECDCG~~~eC~--~~cC~~~tCkL~pga~Ca~G~CC~~C~~~p~G~~CR~~~~eCDlpE~C~G~S~ 474 (716)
T KOG3607|consen 397 SGPVCGNGVVEEGEECDCGTPEECS--NLCCCASTCKLKPGAQCALGLCCKDCKFLPAGTVCRQAKNECDLPEYCNGTSS 474 (716)
T ss_pred CCCccCCcccccCCcCCCCChHHcC--ccccccccccccCCCCCCCCCchhccccccCcceecccCCccccccccCCCCC
Confidence 5689999999999999999999999 78999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhccCCccccCCcccccCCcCCChhhhhccccC
Q psy17304 82 ECPADEFKKNGNPCNMRTGFCFNGFCPTVDVQCEEIWG 119 (119)
Q Consensus 82 ~CP~~~~~~dg~~C~~~~~~C~~G~C~~~~~qC~~l~g 119 (119)
+||+|.|++||++|..++++||+|.|.++++||++|||
T Consensus 475 ~Cp~d~~~~dG~~C~~~~g~Cy~G~C~t~~~QC~~i~g 512 (716)
T KOG3607|consen 475 QCPPDLYVQDGIPCQGGQGYCYDGRCHTRDRQCQKIWG 512 (716)
T ss_pred CCCCCceeECCEecCCCcceecCCCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999998
|
|
| >smart00050 DISIN Homologues of snake disintegrins | Back alignment and domain information |
|---|
| >PF00200 Disintegrin: Disintegrin; InterPro: IPR001762 Disintegrins are a family of small proteins from viper venoms that function as potent inhibitors of both platelet aggregation and integrin-dependent cell adhesion [, ] | Back alignment and domain information |
|---|
| >KOG3658|consensus | Back alignment and domain information |
|---|
| >TIGR02232 myxo_disulf_rpt Myxococcus cysteine-rich repeat | Back alignment and domain information |
|---|
| >PF13948 DUF4215: Domain of unknown function (DUF4215) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 119 | ||||
| 2e3x_A | 427 | Crystal Structure Of Russell's Viper Venom Metallop | 3e-28 | ||
| 3hdb_A | 417 | Crystal Structure Of Aahiv, A Metalloproteinase Fro | 2e-27 | ||
| 2ero_A | 427 | Crystal Structure Of Vascular Apoptosis-inducing Pr | 8e-27 | ||
| 2dw0_A | 419 | Crystal Structure Of Vap2 From Crotalus Atrox Venom | 2e-25 | ||
| 3dsl_B | 419 | The Three-Dimensional Structure Of Bothropasin, The | 3e-25 | ||
| 3k7l_A | 422 | Structures Of Two Elapid Snake Venom Metalloproteas | 3e-25 | ||
| 3g5c_A | 510 | Structural And Biochemical Studies On The Ectodomai | 5e-22 | ||
| 3k7n_A | 397 | Structures Of Two Elapid Snake Venom Metalloproteas | 8e-18 | ||
| 1l3x_A | 73 | Solution Structure Of Novel Disintegrin Salmosin Le | 6e-12 | ||
| 3c05_B | 64 | Crystal Structure Of Acostatin From Agkistrodon Con | 7e-11 | ||
| 3c05_A | 62 | Crystal Structure Of Acostatin From Agkistrodon Con | 1e-10 | ||
| 2ao7_A | 192 | Adam10 Disintegrin And Cysteine- Rich Domain Length | 3e-10 | ||
| 1j2l_A | 70 | Crystal Structure Of The Disintegrin, Trimestatin L | 1e-09 | ||
| 3uci_A | 72 | Crystal Structure Of Rhodostomin Arlddl Mutant Leng | 1e-09 | ||
| 1fvl_A | 70 | The Nuclear Magnetic Resonance Solution Structure O | 2e-09 | ||
| 2pji_A | 68 | Solution Structure Of Rhodostomin P48a Mutant Lengt | 1e-08 | ||
| 2ljv_A | 68 | Solution Structure Of Rhodostomin G50l Mutant Lengt | 5e-08 | ||
| 1q7j_A | 68 | Structural Analysis Of Integrin Alpha Iib Beta 3- D | 5e-08 | ||
| 1n4y_A | 68 | Refined Structure Of Kistrin Length = 68 | 7e-08 | ||
| 2pjg_A | 68 | Solution Structure Of Rhodostomin D51e Mutant Lengt | 7e-08 | ||
| 1q7i_A | 68 | Structural Analysis Of Integrin Alpha Iib Beta 3- D | 9e-08 | ||
| 1tej_A | 64 | Crystal Structure Of A Disintegrin Heterodimer At 1 | 1e-07 | ||
| 1z1x_A | 64 | Crystal Structure Of A Novel Disintegrin From Saw-S | 2e-07 | ||
| 1rmr_A | 64 | Crystal Structure Of Schistatin, A Disintegrin Homo | 2e-06 | ||
| 1tej_B | 64 | Crystal Structure Of A Disintegrin Heterodimer At 1 | 3e-06 |
| >pdb|2E3X|A Chain A, Crystal Structure Of Russell's Viper Venom Metalloproteinase Length = 427 | Back alignment and structure |
|
| >pdb|3HDB|A Chain A, Crystal Structure Of Aahiv, A Metalloproteinase From Venom Of Agkistrodon Acutus Length = 417 | Back alignment and structure |
| >pdb|2ERO|A Chain A, Crystal Structure Of Vascular Apoptosis-inducing Protein- 1(orthorhombic Crystal Form) Length = 427 | Back alignment and structure |
| >pdb|2DW0|A Chain A, Crystal Structure Of Vap2 From Crotalus Atrox Venom (Form 2-1 Crystal) Length = 419 | Back alignment and structure |
| >pdb|3DSL|B Chain B, The Three-Dimensional Structure Of Bothropasin, The Main Hemorrhagic Factor From Bothrops Jararaca Venom. Length = 419 | Back alignment and structure |
| >pdb|3K7L|A Chain A, Structures Of Two Elapid Snake Venom Metalloproteases With Distinct Activities Highlight The Disulfide Patterns In The D Domain Of Adamalysin Family Proteins Length = 422 | Back alignment and structure |
| >pdb|3G5C|A Chain A, Structural And Biochemical Studies On The Ectodomain Of Human Adam22 Length = 510 | Back alignment and structure |
| >pdb|3K7N|A Chain A, Structures Of Two Elapid Snake Venom Metalloproteases With Distinct Activities Highlight The Disulfide Patterns In The D Domain Of Adamalysin Family Proteins Length = 397 | Back alignment and structure |
| >pdb|1L3X|A Chain A, Solution Structure Of Novel Disintegrin Salmosin Length = 73 | Back alignment and structure |
| >pdb|3C05|B Chain B, Crystal Structure Of Acostatin From Agkistrodon Contortrix Contortrix Length = 64 | Back alignment and structure |
| >pdb|3C05|A Chain A, Crystal Structure Of Acostatin From Agkistrodon Contortrix Contortrix Length = 62 | Back alignment and structure |
| >pdb|2AO7|A Chain A, Adam10 Disintegrin And Cysteine- Rich Domain Length = 192 | Back alignment and structure |
| >pdb|1J2L|A Chain A, Crystal Structure Of The Disintegrin, Trimestatin Length = 70 | Back alignment and structure |
| >pdb|3UCI|A Chain A, Crystal Structure Of Rhodostomin Arlddl Mutant Length = 72 | Back alignment and structure |
| >pdb|1FVL|A Chain A, The Nuclear Magnetic Resonance Solution Structure Of Flavoridin, An Antagonist Of The Platelet Gp Iib-Iiia Receptor Length = 70 | Back alignment and structure |
| >pdb|2PJI|A Chain A, Solution Structure Of Rhodostomin P48a Mutant Length = 68 | Back alignment and structure |
| >pdb|2LJV|A Chain A, Solution Structure Of Rhodostomin G50l Mutant Length = 68 | Back alignment and structure |
| >pdb|1Q7J|A Chain A, Structural Analysis Of Integrin Alpha Iib Beta 3- Disintegrin With The Akgdwn Motif Length = 68 | Back alignment and structure |
| >pdb|1N4Y|A Chain A, Refined Structure Of Kistrin Length = 68 | Back alignment and structure |
| >pdb|2PJG|A Chain A, Solution Structure Of Rhodostomin D51e Mutant Length = 68 | Back alignment and structure |
| >pdb|1Q7I|A Chain A, Structural Analysis Of Integrin Alpha Iib Beta 3- Disintegrin With The Akgdwn Motif Length = 68 | Back alignment and structure |
| >pdb|1TEJ|A Chain A, Crystal Structure Of A Disintegrin Heterodimer At 1.9 A Resolution Length = 64 | Back alignment and structure |
| >pdb|1Z1X|A Chain A, Crystal Structure Of A Novel Disintegrin From Saw-Scaled Viper At 3.2 A Resolution Length = 64 | Back alignment and structure |
| >pdb|1RMR|A Chain A, Crystal Structure Of Schistatin, A Disintegrin Homodimer From Saw-Scaled Viper (Echis Carinatus) At 2.5 A Resolution Length = 64 | Back alignment and structure |
| >pdb|1TEJ|B Chain B, Crystal Structure Of A Disintegrin Heterodimer At 1.9 A Resolution Length = 64 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 119 | |||
| 3k7l_A | 422 | Atragin; SVMP, metalloprotease, hydrolase; HET: NA | 2e-39 | |
| 2e3x_A | 427 | Coagulation factor X-activating enzyme light CHAI; | 2e-37 | |
| 2ero_A | 427 | VAP-1, vascular apoptosis-inducing protein 1; meta | 3e-36 | |
| 2dw0_A | 419 | Catrocollastatin; apoptotic toxin, SVMP, metallopr | 1e-35 | |
| 3g5c_A | 510 | ADAM 22; alpha/beta fold, cross-linked domain, cel | 2e-32 | |
| 3k7n_A | 397 | K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A { | 8e-24 | |
| 2ao7_A | 192 | ADAM 10; extracellular, protease, disintegrin, hyd | 5e-21 | |
| 1j2l_A | 70 | Disintegrin triflavin; RGD motif, trimestatin, sna | 2e-16 | |
| 1tej_A | 64 | Disintegrin chain A; cryatal structure, heterodime | 3e-16 | |
| 1ro3_A | 49 | Disintegrin echistatin; no regular secondary struc | 3e-14 | |
| 2v4b_A | 300 | Adamts-1; zymogen, protease, hydrolase, metallopro | 1e-09 | |
| 2rjp_A | 316 | Adamts-4; metalloprotease domain, aggrecanase, cle | 3e-08 | |
| 2rjq_A | 378 | Adamts-5; metalloprotease domain, aggrecanase, cle | 1e-07 | |
| 2w9o_A | 46 | Jerdostatin, short disintegrin jerdostatin; venom, | 5e-07 | |
| 2i47_A | 288 | ADAM 17; TACE-inhibitor complex, hydrolase; HET: I | 2e-06 | |
| 1mpz_A | 41 | Obtustatin; disintegrin, hydrolase; NMR {Macrovipe | 3e-04 |
| >3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra} Length = 422 | Back alignment and structure |
|---|
Score = 135 bits (340), Expect = 2e-39
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Query: 1 IVHKLCGNGVVDEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFG 60
+ +CGN V+ E+CDCGS +C CC+A TCKL+ E+QC CC+ CK +
Sbjct: 215 VSPPICGNYFVEVGEECDCGSPADCQ--SACCNATTCKLQHEAQCDSEECCEKCKFKGAR 272
Query: 61 HICREAKTECDLPEWCTGTSGECPADEFKKNGNPCNMRTGFCFNGFCPTVDVQCEEIWG 119
CR AK +CDLPE CTG S ECP D F++NG PC G+C+NG CP + QC + G
Sbjct: 273 AECRAAKDDCDLPELCTGQSAECPTDVFQRNGLPCQNNQGYCYNGKCPIMTNQCIALRG 331
|
| >2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} Length = 427 | Back alignment and structure |
|---|
| >2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A* Length = 427 | Back alignment and structure |
|---|
| >2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A* Length = 419 | Back alignment and structure |
|---|
| >3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} Length = 510 | Back alignment and structure |
|---|
| >3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra} Length = 397 | Back alignment and structure |
|---|
| >2ao7_A ADAM 10; extracellular, protease, disintegrin, hydrolase; 2.90A {Bos taurus} Length = 192 | Back alignment and structure |
|---|
| >1j2l_A Disintegrin triflavin; RGD motif, trimestatin, snake venom, toxin; 1.70A {Trimeresurus flavoviridis} SCOP: g.20.1.1 PDB: 1fvl_A 2pji_A 1n4y_A 2pjf_A 2pjg_A 1q7i_A 1q7j_A 1l3x_A 3c05_A 3c05_B Length = 70 | Back alignment and structure |
|---|
| >1tej_A Disintegrin chain A; cryatal structure, heterodimer, protein binding; 1.90A {Echis carinatus} SCOP: g.20.1.1 PDB: 1rmr_A 1tej_B 1z1x_A Length = 64 | Back alignment and structure |
|---|
| >1ro3_A Disintegrin echistatin; no regular secondary structure, cell adhesion; NMR {Echis carinatus} SCOP: g.20.1.1 PDB: 2ech_A Length = 49 | Back alignment and structure |
|---|
| >2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A* Length = 300 | Back alignment and structure |
|---|
| >2w9o_A Jerdostatin, short disintegrin jerdostatin; venom, toxin, cell adhesion, blood coagulation; NMR {Trimeresurus jerdonii} PDB: 2w9u_A Length = 46 | Back alignment and structure |
|---|
| >2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A* Length = 288 | Back alignment and structure |
|---|
| >1mpz_A Obtustatin; disintegrin, hydrolase; NMR {Macrovipera lebetina obtusa} SCOP: g.20.1.1 PDB: 2w9w_A 2w9v_A Length = 41 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 119 | |||
| 3k7l_A | 422 | Atragin; SVMP, metalloprotease, hydrolase; HET: NA | 100.0 | |
| 2dw0_A | 419 | Catrocollastatin; apoptotic toxin, SVMP, metallopr | 100.0 | |
| 2e3x_A | 427 | Coagulation factor X-activating enzyme light CHAI; | 100.0 | |
| 3g5c_A | 510 | ADAM 22; alpha/beta fold, cross-linked domain, cel | 100.0 | |
| 2ero_A | 427 | VAP-1, vascular apoptosis-inducing protein 1; meta | 100.0 | |
| 2ao7_A | 192 | ADAM 10; extracellular, protease, disintegrin, hyd | 100.0 | |
| 3k7n_A | 397 | K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A { | 100.0 | |
| 3uci_A | 72 | Disintegrin; integrin alphavbeta3, toxin; 1.35A {C | 99.96 | |
| 1j2l_A | 70 | Disintegrin triflavin; RGD motif, trimestatin, sna | 99.95 | |
| 1tej_A | 64 | Disintegrin chain A; cryatal structure, heterodime | 99.9 | |
| 3c05_B | 64 | Disintegrin acostatin-beta; beta-sheets, disulfide | 99.89 | |
| 2w9o_A | 46 | Jerdostatin, short disintegrin jerdostatin; venom, | 99.71 | |
| 1ro3_A | 49 | Disintegrin echistatin; no regular secondary struc | 99.7 | |
| 1mpz_A | 41 | Obtustatin; disintegrin, hydrolase; NMR {Macrovipe | 99.65 | |
| 2rjp_A | 316 | Adamts-4; metalloprotease domain, aggrecanase, cle | 99.46 | |
| 2v4b_A | 300 | Adamts-1; zymogen, protease, hydrolase, metallopro | 99.3 | |
| 2rjq_A | 378 | Adamts-5; metalloprotease domain, aggrecanase, cle | 98.96 |
| >3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=315.86 Aligned_cols=116 Identities=48% Similarity=1.142 Sum_probs=113.4
Q ss_pred CCCcccCCceeCCCCCCCCCcCccCCCCCCCCcccCccccCCcCCCCCCCCCCcccCCCCccccCCCCCCCCCcccCCCC
Q psy17304 2 VHKLCGNGVVDEDEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICREAKTECDLPEWCTGTSG 81 (119)
Q Consensus 2 ~~~~CGNgivE~gEeCDCG~~~~C~~~d~CC~~~~C~lk~ga~Cs~g~CC~~C~~~~~g~~Cr~~~~~Cd~~e~C~G~s~ 81 (119)
..++|||+|||+|||||||++++|. |+||++++|+||+||+|++|+||++|||+++|++||++.++|||||||+|+|+
T Consensus 216 ~~~~CGN~~vE~gEeCDCG~~~~C~--~~CC~~~~C~l~~ga~C~~g~CC~~C~~~~~g~~CR~~~~~CDl~E~C~G~s~ 293 (422)
T 3k7l_A 216 SPPICGNYFVEVGEECDCGSPADCQ--SACCNATTCKLQHEAQCDSEECCEKCKFKGARAECRAAKDDCDLPELCTGQSA 293 (422)
T ss_dssp SCCCTTSSSCCTTCSCCCCCTTTCC--CSSEETTTTEECTTCCCSSSTTEETTEECCTTCEEECCSSTTBCCEECCSSCS
T ss_pred ccCcCCCceeeCCEEecCCCccccC--CCCCChhhCccCCCCccCCCcCCCcCeEcCCCCeeCCCCCCcCCCcccCCCCc
Confidence 4689999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhccCCccccCCcccccCCcCCChhhhhccccC
Q psy17304 82 ECPADEFKKNGNPCNMRTGFCFNGFCPTVDVQCEEIWG 119 (119)
Q Consensus 82 ~CP~~~~~~dg~~C~~~~~~C~~G~C~~~~~qC~~l~g 119 (119)
.||+|+|++||+||.++++|||+|+|+++++||+.|||
T Consensus 294 ~CP~d~~~~dG~~C~~~~~~C~~G~C~~~~~QC~~l~G 331 (422)
T 3k7l_A 294 ECPTDVFQRNGLPCQNNQGYCYNGKCPIMTNQCIALRG 331 (422)
T ss_dssp SCCCCCBCCTTCEETTTTEECBTTBCCCHHHHHHHHHC
T ss_pred CCcCCcccCCCCccCCCcCcccCCCCCCHHHHHHHhhC
Confidence 99999999999999998899999999999999999998
|
| >2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A* | Back alignment and structure |
|---|
| >2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis} | Back alignment and structure |
|---|
| >3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} | Back alignment and structure |
|---|
| >2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A* | Back alignment and structure |
|---|
| >2ao7_A ADAM 10; extracellular, protease, disintegrin, hydrolase; 2.90A {Bos taurus} | Back alignment and structure |
|---|
| >3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra} | Back alignment and structure |
|---|
| >3uci_A Disintegrin; integrin alphavbeta3, toxin; 1.35A {Calloselasma rhodostoma} PDB: 2ljv_A 1q7i_A 2pji_A 1q7j_A 1n4y_A 2pjf_A 2pjg_A 1j2l_A 1fvl_A 1l3x_A 3c05_A | Back alignment and structure |
|---|
| >1j2l_A Disintegrin triflavin; RGD motif, trimestatin, snake venom, toxin; 1.70A {Trimeresurus flavoviridis} SCOP: g.20.1.1 PDB: 1fvl_A 2pji_A 1n4y_A 2pjf_A 2pjg_A 1q7i_A 1q7j_A 1l3x_A 3c05_A 3c05_B | Back alignment and structure |
|---|
| >1tej_A Disintegrin chain A; cryatal structure, heterodimer, protein binding; 1.90A {Echis carinatus} SCOP: g.20.1.1 PDB: 1rmr_A 1tej_B 1z1x_A | Back alignment and structure |
|---|
| >3c05_B Disintegrin acostatin-beta; beta-sheets, disulfide bridges, blood coagulation, cell adhesion, secreted, hydrolase; 1.70A {Agkistrodon contortrix contortrix} SCOP: g.20.1.1 | Back alignment and structure |
|---|
| >2w9o_A Jerdostatin, short disintegrin jerdostatin; venom, toxin, cell adhesion, blood coagulation; NMR {Trimeresurus jerdonii} PDB: 2w9u_A | Back alignment and structure |
|---|
| >1ro3_A Disintegrin echistatin; no regular secondary structure, cell adhesion; NMR {Echis carinatus} SCOP: g.20.1.1 PDB: 2ech_A | Back alignment and structure |
|---|
| >1mpz_A Obtustatin; disintegrin, hydrolase; NMR {Macrovipera lebetina obtusa} SCOP: g.20.1.1 PDB: 2w9w_A 2w9v_A | Back alignment and structure |
|---|
| >2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 119 | ||||
| d1teja_ | 62 | g.20.1.1 (A:) Schistatin {Saw-scaled viper (Echis | 3e-14 | |
| d1j2la_ | 68 | g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake ( | 4e-14 | |
| d2echa_ | 49 | g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis | 6e-13 | |
| d1mpza_ | 41 | g.20.1.1 (A:) Obtustatin {Blunt-nosed viper (Viper | 1e-08 |
| >d1teja_ g.20.1.1 (A:) Schistatin {Saw-scaled viper (Echis carinatus), different isoforms [TaxId: 40353]} Length = 62 | Back information, alignment and structure |
|---|
class: Small proteins fold: Blood coagulation inhibitor (disintegrin) superfamily: Blood coagulation inhibitor (disintegrin) family: Blood coagulation inhibitor (disintegrin) domain: Schistatin species: Saw-scaled viper (Echis carinatus), different isoforms [TaxId: 40353]
Score = 60.2 bits (146), Expect = 3e-14
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 28 KDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICREAKTECDLPEWCTGTSGECPADE 87
+PCCD + CK + C GPCC+NCK G IC+ A+ + + ++CTG + +CP +
Sbjct: 2 VNPCCDPVICKPRDGEHCISGPCCNNCKFLNSGTICQRARGDGN-HDYCTGITTDCPRNR 60
Query: 88 F 88
+
Sbjct: 61 Y 61
|
| >d1j2la_ g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]} Length = 68 | Back information, alignment and structure |
|---|
| >d2echa_ g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis carinatus) [TaxId: 40353]} Length = 49 | Back information, alignment and structure |
|---|
| >d1mpza_ g.20.1.1 (A:) Obtustatin {Blunt-nosed viper (Vipera lebetina obtusa) [TaxId: 209528]} Length = 41 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 119 | |||
| d1j2la_ | 68 | Flavoridin (triflavin) {Habu snake (Trimeresurus f | 99.93 | |
| d1teja_ | 62 | Schistatin {Saw-scaled viper (Echis carinatus), di | 99.89 | |
| d2echa_ | 49 | Echistatin {Saw-scaled viper (Echis carinatus) [Ta | 99.83 | |
| d1mpza_ | 41 | Obtustatin {Blunt-nosed viper (Vipera lebetina obt | 99.62 |
| >d1j2la_ g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]} | Back information, alignment and structure |
|---|
class: Small proteins fold: Blood coagulation inhibitor (disintegrin) superfamily: Blood coagulation inhibitor (disintegrin) family: Blood coagulation inhibitor (disintegrin) domain: Flavoridin (triflavin) species: Habu snake (Trimeresurus flavoviridis) [TaxId: 88087]
Probab=99.93 E-value=5.1e-27 Score=151.27 Aligned_cols=66 Identities=52% Similarity=1.148 Sum_probs=62.2
Q ss_pred CCCCCCCCcCccCCCCCCCCcccCccccCCcCCCCCCCCCCcccCCCCccccCCCCCCCCCcccCCCCCCCc
Q psy17304 14 DEDCDCGSIDECHEKDPCCDAITCKLKKESQCADGPCCDNCKLRPFGHICREAKTECDLPEWCTGTSGECPA 85 (119)
Q Consensus 14 gEeCDCG~~~~C~~~d~CC~~~~C~lk~ga~Cs~g~CC~~C~~~~~g~~Cr~~~~~Cd~~e~C~G~s~~CP~ 85 (119)
|||||||+.. |+||++.+|+|++||+|++|+||++|+|+++|++||++++ ++++|||||+|+.||.
T Consensus 1 GEeCDCG~~~-----d~CC~~~tC~L~~ga~Cs~G~CC~~C~~~~~g~~CR~~~~-~~~~e~C~G~s~~CPk 66 (68)
T d1j2la_ 1 GEECDCGSPS-----NPCCDAATCKLRPGAQCADGLCCDQCRFKKKRTICRIARG-DFPDDRCTGQSADCPR 66 (68)
T ss_dssp CCCCSCSSTT-----CTTBCTTTSSBCTTCSCSSSTTEETTEECCTTCEEECCSS-SSCCEECCSSCSSCCC
T ss_pred CccccCCCCC-----CccccCCcCEECCCceecCCCccccCeEcCCCCCcCCCCC-CCCCCccCCcCCCCcC
Confidence 8999999754 8999999999999999999999999999999999999865 7999999999999996
|
| >d1teja_ g.20.1.1 (A:) Schistatin {Saw-scaled viper (Echis carinatus), different isoforms [TaxId: 40353]} | Back information, alignment and structure |
|---|
| >d2echa_ g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis carinatus) [TaxId: 40353]} | Back information, alignment and structure |
|---|
| >d1mpza_ g.20.1.1 (A:) Obtustatin {Blunt-nosed viper (Vipera lebetina obtusa) [TaxId: 209528]} | Back information, alignment and structure |
|---|