Psyllid ID: psy173

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MEADVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG
Secondary Structure (PSIPRED)
cccccccHHcHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccHHHcccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHcccccccHHHHccccccccc
Coil and Loop (DISEMBL)
meadvsqdqdFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAyrsgleipdaDLSRALRHLSSHQAQAVRRRVLSLNHTLRQRgarqlrpknrkpdirhVFKDVERSEG
Flexible Loop (DISEMBL)
meadvsqdqdfqdYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNhtlrqrgarqlrpknrkpdirhvfkdverseg
Low Complexity Region (SEG)
MEADVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG
Disordered region (IsUnstruct)
**********FQDYWNEYRILQET**********************************************************************************************************
Disordered Region (DISOPRED)
**********FQDYWNEYR******************************EWLSTAGLSQLSDA*************RALRHLSSHQAQAVRRRVLSLNH******************IR****D******
Disordered Region (DISEMBL)
********QDFQDYWNEYRILQETKRLDEFLDEQE***************WLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG
Disordered Region (DISPRO)
*********DFQDYWNEYRILQE**********************EQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRG**********P*****F********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEADVSQDQDFQDYWNEYRILQExxxxxxxxxxxxxxxxxxxxxxxxEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q9P2N2	729	Rho GTPase-activating pro	yes	N/A	0.753	0.134	0.312	0.0004
Q8BN58	729	Rho GTPase-activating pro	yes	N/A	0.523	0.093	0.387	0.0008

>sp|Q9P2N2|RHG28_HUMAN Rho GTPase-activating protein 28 OS=Homo sapiens GN=ARHGAP28 PE=1 SV=3

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 14/112 (12%)

Query: 11  FQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEI 70
            +D+W E   ++++    +  +E   A     DEGE EAEWL   GLS L     SG E 
Sbjct: 78  MEDFWREIESIKDSSMGGQ--EEPPPAEVTPVDEGELEAEWLQDVGLSTLI----SGDE- 130

Query: 71  PDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVF 122
            + D    L  L+  QA AV++R  +   T+R++  + +R      D+R +F
Sbjct: 131 -EEDGKALLSTLTRTQAAAVQKRYHTYTQTMRKKDKQSIR------DVRDIF 175

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.
Homo sapiens (taxid: 9606)

>sp|Q8BN58|RHG28_MOUSE Rho GTPase-activating protein 28 OS=Mus musculus GN=Arhgap28 PE=1 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 12/80 (15%)

Query: 43  DEGEQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLR 102
           DEGE EAEWL   GLS L     SG E  + D    L  L+  QA AV++R  +   TLR
Sbjct: 113 DEGELEAEWLQDVGLSTLI----SGNE--EEDGKALLSTLTRTQAAAVKKRYNTYTQTLR 166

Query: 103 QRGARQLRPKNRKPDIRHVF 122
           ++  + +R      D+R +F
Sbjct: 167 KKNKQPVR------DVRDIF 180

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
328715209	764	PREDICTED: rho GTPase-activating protein	0.938	0.159	0.587	7e-34
350423428	625	PREDICTED: hypothetical protein LOC10074	0.915	0.190	0.528	8e-25
383862884	645	PREDICTED: rho GTPase-activating protein	0.892	0.179	0.549	1e-24
307198082	644	Rho GTPase-activating protein 18 [Harpeg	0.9	0.181	0.524	5e-24
307170385	643	Rho GTPase-activating protein 18 [Campon	0.9	0.181	0.524	1e-23
380017704	629	PREDICTED: uncharacterized protein LOC10	0.915	0.189	0.512	1e-23
328786509	625	PREDICTED: hypothetical protein LOC40828	0.915	0.190	0.512	2e-23
340720265	641	PREDICTED: rho GTPase-activating protein	0.915	0.185	0.52	2e-23
322790107	637	hypothetical protein SINV_05144 [Solenop	0.9	0.183	0.516	5e-23
345491822	642	PREDICTED: hypothetical protein LOC10012	0.869	0.176	0.516	1e-20

>gi|328715209|ref|XP_001946474.2| PREDICTED: rho GTPase-activating protein 18-like [Acyrthosiphon pisum]

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 9/131 (6%)

Query: 1   MEADVSQDQDFQDYWNEYRILQETKRLDEFLDE-----QEEAARQLEDEGEQEAEWLSTA 55
           ME DVSQD  F+DYWNEY+I+QET++LD +LDE     QE A   L  EG  EA+WLS+A
Sbjct: 4   METDVSQD--FEDYWNEYKIIQETRQLDSYLDEECPPEQEFAVTHLP-EGAVEADWLSSA 60

Query: 56  GLSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRK 115
           GLS L++++ +G E+PD++L  A+RHLS+ QA AVR RV SLNHT+RQRG RQL+ +++K
Sbjct: 61  GLSFLTESFENGCEVPDSELEPAIRHLSTRQADAVRLRVHSLNHTVRQRG-RQLKARHKK 119

Query: 116 PDIRHVFKDVE 126
           PDIR VF+D E
Sbjct: 120 PDIRDVFRDFE 130

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423428|ref|XP_003493479.1| PREDICTED: hypothetical protein LOC100743764 [Bombus impatiens]

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 90/125 (72%), Gaps = 6/125 (4%)

Query: 5   VSQDQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
           +  D    +YW EY ++++ETK LD++L  +EE  R  +D GE+EAEWL TAGL QL++A
Sbjct: 10  IGGDNHLLEYWEEYQKMMEETKLLDDYL--EEEYPRNYDD-GEEEAEWLRTAGLGQLTEA 66

Query: 64  YRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFK 123
           +++G E+P  +L  ALR LS  QA+AVRRRV SLNHT++QR  +  R + RKPDIR VFK
Sbjct: 67  WKAGREVPPDELGAALRPLSRAQAEAVRRRVKSLNHTVKQRFNQ--RQRVRKPDIRDVFK 124

Query: 124 DVERS 128
           D+E S
Sbjct: 125 DIEAS 129

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862884|ref|XP_003706913.1| PREDICTED: rho GTPase-activating protein 28-like [Megachile rotundata]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 6/122 (4%)

Query: 8   DQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRS 66
           D    DYW EY ++++ETK LD++L  +EE  R   DEGE+EAEWL TAGL QL++A+++
Sbjct: 13  DNHLSDYWQEYQKMMEETKLLDDYL--EEECPRNY-DEGEEEAEWLRTAGLGQLTEAWKA 69

Query: 67  GLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVE 126
           G E+   +L  ALR LS  QA+AV+RRV SLNHT++QR  +  R + RKPDIR VFKDVE
Sbjct: 70  GREVQPEELGAALRPLSRAQAEAVKRRVKSLNHTVKQRFNQ--RQRVRKPDIRDVFKDVE 127

Query: 127 RS 128
            S
Sbjct: 128 VS 129

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198082|gb|EFN79135.1| Rho GTPase-activating protein 18 [Harpegnathos saltator]

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 8   DQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRS 66
           D    +YW EY ++++ETK LD++LDE  E + +  DEGE+EAEWL  AGL QL++A+++
Sbjct: 13  DNHLLEYWEEYQKMIEETKMLDDYLDE--ECSPRCYDEGEEEAEWLRAAGLEQLTEAWKA 70

Query: 67  GLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVE 126
           G E+   +L   LR LS  QA+AV+RRV SLNHT++QR  +  R + RKPDIR VFKDVE
Sbjct: 71  GREVQPEELGAVLRPLSRAQAEAVKRRVKSLNHTVKQRFNQ--RQRVRKPDIRDVFKDVE 128

Query: 127 RS 128
            S
Sbjct: 129 VS 130

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307170385|gb|EFN62697.1| Rho GTPase-activating protein 18 [Camponotus floridanus]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 5/122 (4%)

Query: 8   DQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRS 66
           D    +YW EY ++++ETK LD++LDE  E + +  DEGE+EA+WL  AGL QL++A+++
Sbjct: 13  DNHLLEYWEEYQKMIEETKMLDDYLDE--ECSPRSYDEGEEEADWLRAAGLGQLTEAWKA 70

Query: 67  GLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVE 126
           G E+   +L  ALR LS  QA+AV+RRV SLNHT++QR  +  R + RKPDIR VFKDVE
Sbjct: 71  GREVQPEELGAALRPLSRAQAEAVKRRVRSLNHTVKQRFNQ--RQRVRKPDIRDVFKDVE 128

Query: 127 RS 128
            S
Sbjct: 129 VS 130

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017704|ref|XP_003692787.1| PREDICTED: uncharacterized protein LOC100866919 [Apis florea]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 88/125 (70%), Gaps = 6/125 (4%)

Query: 5   VSQDQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
           +  +  F DYW EY ++++ETK LD++L  +EE  R  +D GE+EAEWL  AGL QL++A
Sbjct: 9   IGSENHFLDYWEEYQKMMEETKLLDDYL--EEECPRNCDD-GEEEAEWLRIAGLGQLTEA 65

Query: 64  YRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFK 123
           +++G E+   +L  ALR LS  QA+AV+RRV SLNHT++ R  +  R + RKPDIR VFK
Sbjct: 66  WKAGREVQPDELGAALRPLSRAQAEAVKRRVKSLNHTVKHRFNQ--RQRVRKPDIRDVFK 123

Query: 124 DVERS 128
           DVE S
Sbjct: 124 DVEAS 128

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786509|ref|XP_391837.3| PREDICTED: hypothetical protein LOC408285 isoform 1 [Apis mellifera]

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 88/125 (70%), Gaps = 6/125 (4%)

Query: 5   VSQDQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
           +  D  + DYW EY ++++ETK LD++L  +EE  R  +D GE+EAEWL  AGL QL++A
Sbjct: 9   IGSDNHYLDYWEEYQKMMEETKLLDDYL--EEECPRNYDD-GEEEAEWLRIAGLGQLTEA 65

Query: 64  YRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFK 123
           +++G E+   +L  ALR LS  QA+AV+RRV SLNHT++ R  +  R + RKPDIR VFK
Sbjct: 66  WKAGREVQPDELGAALRPLSRAQAEAVKRRVRSLNHTVKHRFNQ--RQRVRKPDIRDVFK 123

Query: 124 DVERS 128
           DVE S
Sbjct: 124 DVEAS 128

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720265|ref|XP_003398561.1| PREDICTED: rho GTPase-activating protein 18-like isoform 1 [Bombus terrestris] gi|340720267|ref|XP_003398562.1| PREDICTED: rho GTPase-activating protein 18-like isoform 2 [Bombus terrestris]

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 6/125 (4%)

Query: 5   VSQDQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
           +  D    +YW EY ++++ETK LD++L  +EE  R  +D GE+EAEWL TAGL QL++A
Sbjct: 10  IGGDNHLLEYWEEYQKMMEETKLLDDYL--EEEYPRNYDD-GEEEAEWLRTAGLGQLTEA 66

Query: 64  YRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFK 123
           +++G E+   +L  ALR LS  QA+AVRRRV SLNHT++QR  +  R + RKPDIR VFK
Sbjct: 67  WKAGREVLPDELGAALRPLSRAQAEAVRRRVKSLNHTVKQRFNQ--RQRVRKPDIRDVFK 124

Query: 124 DVERS 128
           D+E S
Sbjct: 125 DIEAS 129

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790107|gb|EFZ15140.1| hypothetical protein SINV_05144 [Solenopsis invicta]

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 8   DQDFQDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRS 66
           D    +YW EY ++++ETK LD++L  +EE + +  DEGE+EAEWL  AGL QL++A+++
Sbjct: 13  DSHLLEYWEEYQKMIEETKMLDDYL--EEECSPRSYDEGEEEAEWLRAAGLGQLTEAWKA 70

Query: 67  GLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVE 126
           G E+   +L  ALR LS  QA+ V+RRV SLNHT++QR  +  R + RKPDIR VFKDVE
Sbjct: 71  GREVQPEELGVALRPLSRVQAEVVKRRVRSLNHTVKQRFNQ--RQRVRKPDIRDVFKDVE 128

Query: 127 RS 128
            S
Sbjct: 129 VS 130

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345491822|ref|XP_001607660.2| PREDICTED: hypothetical protein LOC100123892 [Nasonia vitripennis]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 82/118 (69%), Gaps = 5/118 (4%)

Query: 12  QDYWNEY-RILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEI 70
            + W  Y ++L+ETK LD++LDE  E + +  DEGE+EAEWL  AGL +L++ ++ G EI
Sbjct: 17  HECWEVYQKVLEETKTLDDYLDE--ECSPRSFDEGEEEAEWLRAAGLGELTEPWKEGREI 74

Query: 71  PDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERS 128
              +L  ALR LS  QA+AV+RRV SLNHT++QR  +  R + RKPDIR VFKD E S
Sbjct: 75  QPEELGAALRPLSRAQAEAVKRRVRSLNHTVKQRYNQ--RQRVRKPDIRDVFKDAEVS 130

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
FB|FBgn0039994	665	CG17082 [Drosophila melanogast	0.838	0.163	0.404	5.2e-14
UNIPROTKB|F1S306	409	F1S306 "Uncharacterized protei	0.876	0.278	0.317	4.1e-08
MGI|MGI:1921160	663	Arhgap18 "Rho GTPase activatin	0.8	0.156	0.352	6.7e-08
ZFIN|ZDB-GENE-041114-147	638	arhgap28 "Rho GTPase activatin	0.8	0.163	0.362	8.1e-08
UNIPROTKB|F1PVX8	626	ARHGAP18 "Uncharacterized prot	0.869	0.180	0.322	1.3e-07
UNIPROTKB|Q8N392	663	ARHGAP18 "Rho GTPase-activatin	0.892	0.174	0.323	1.4e-07
RGD|1305053	628	Arhgap18 "Rho GTPase activatin	0.815	0.168	0.363	3.5e-07
UNIPROTKB|F1MJ20	704	ARHGAP28 "Uncharacterized prot	0.807	0.149	0.336	8.6e-07
UNIPROTKB|I3LE57	654	I3LE57 "Uncharacterized protei	0.807	0.160	0.344	1e-06
UNIPROTKB|I3LSP7	654	I3LSP7 "Uncharacterized protei	0.807	0.160	0.344	1e-06

FB|FBgn0039994 CG17082 [Drosophila melanogaster (taxid:7227)]

 Score = 191 (72.3 bits), Expect = 5.2e-14, P = 5.2e-14
 Identities = 49/121 (40%), Positives = 71/121 (58%)

Query:     6 SQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYR 65
             S DQDF ++ NEY +   ++ ++       EA+   ED GE EAEWL +AG  +L+  + 
Sbjct:    46 SDDQDFSEFLNEYYLQSNSQSIEP------EAS--YED-GEMEAEWLVSAGYPELTKPFE 96

Query:    66 SGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDV 125
              GLE+   DL   L  LS   A+A+ + V +LN T+R R   + RPK RKPDIR VF++ 
Sbjct:    97 QGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVR--TKSRPK-RKPDIRDVFREF 153

Query:   126 E 126
             +
Sbjct:   154 D 154

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1S306 F1S306 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 133 (51.9 bits), Expect = 4.1e-08, P = 4.1e-08
 Identities = 40/126 (31%), Positives = 61/126 (48%)

Query:     4 DVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
             D   +   +DYW E   L+  K+  E   +QE    +  DEGE E EWL  AGLS L   
Sbjct:    29 DSLDELSMEDYWIE---LENIKKSSENRQDQEVVVVKEPDEGELEEEWLKEAGLSNL--- 82

Query:    64 YRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFK 123
             +      P   +   L  L+  QA AV++RV +++ TLR++  +      + PD+R +F 
Sbjct:    83 FGEAAGDPQESMV-FLSTLTRTQAAAVQKRVETVSQTLRKKNKQY-----QVPDVRDIFA 136

Query:   124 DVERSE 129
                 S+
Sbjct:   137 QQRESK 142

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1921160 Arhgap18 "Rho GTPase activating protein 18" [Mus musculus (taxid:10090)]

 Score = 134 (52.2 bits), Expect = 6.7e-08, P = 6.7e-08
 Identities = 42/119 (35%), Positives = 63/119 (52%)

Query:     6 SQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLE-DEGEQEAEWLSTAGLSQLSDAY 64
             S D+  + YW E   L+  KR +E   E +EA    E DEGE E EWL  AGLS L   +
Sbjct:    68 SLDESMEAYWTE---LENIKRSNENRQEGQEAIVVKEPDEGELEEEWLKEAGLSNL---F 121

Query:    65 RSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQ-LRPKNRKPDIRHVF 122
                ++ P   +   L  L+  QA AV++RV +++ TLR++  +  +R      D+R +F
Sbjct:   122 GESIDDPQESIL-FLSTLTRTQAAAVQKRVETVSQTLRKKNKQHHIR------DVRDIF 173

GO:0003674 "molecular_function" evidence=ND

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-041114-147 arhgap28 "Rho GTPase activating protein 28" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 8.1e-08, P = 8.1e-08
 Identities = 45/124 (36%), Positives = 63/124 (50%)

Query:     2 EADVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLS 61
             E  VS+D   +DYW+E + +QE    D    +QE A +   DE E E  WL  AGL+ L 
Sbjct:    55 EQCVSRDS-MEDYWSEVKNIQE----DTHTHQQEPAEQASTDEAELEEAWLQDAGLTTLI 109

Query:    62 DAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHV 121
                 +G +  D      L  L+  QA  V++R+ +  HTLR+        KNR+P  RHV
Sbjct:   110 ----TGAQ-GDGPTEALLSTLTHSQAAMVKKRLDNYTHTLRK--------KNRQPT-RHV 155

Query:   122 FKDV 125
              +DV
Sbjct:   156 -RDV 158

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1PVX8 ARHGAP18 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 41/127 (32%), Positives = 60/127 (47%)

Query:     4 DVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDA 63
             D   +   +DYW E   ++  K+  E   +QE       DEGE E EWL  AGLS L   
Sbjct:    29 DSLDELSMEDYWTE---VENIKKSSENRQDQEVVVVNEPDEGELEEEWLKEAGLSNLF-- 83

Query:    64 YRSGLEIPDADLSRA-LRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVF 122
                G    D   S   L  L+  QA AV++RV +++ TLR++  +      + PD+R +F
Sbjct:    84 ---GESAGDPQESMVFLSTLTRTQAAAVQKRVETVSQTLRKKNKQY-----QIPDVRDIF 135

Query:   123 KDVERSE 129
                  S+
Sbjct:   136 AQQRESK 142

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q8N392 ARHGAP18 "Rho GTPase-activating protein 18" [Homo sapiens (taxid:9606)]

 Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 43/133 (32%), Positives = 64/133 (48%)

Query:     2 EADVSQDQ----DFQDYWNEYRILQETKRLDEFLDEQEEAARQLE-DEGEQEAEWLSTAG 56
             +  +SQD       +DYW E   L+  K+  E   E +E     E DEGE E EWL  AG
Sbjct:    62 DRSISQDSLDELSMEDYWIE---LENIKKSSENSQEDQEVVVVKEPDEGELEEEWLKEAG 118

Query:    57 LSQLSDAYRSGLEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKP 116
             LS L   +      P   +   L  L+  QA AV++RV +++ TLR++  +      + P
Sbjct:   119 LSNL---FGESAGDPQESIV-FLSTLTRTQAAAVQKRVETVSQTLRKKNKQY-----QIP 169

Query:   117 DIRHVFKDVERSE 129
             D+R +F     S+
Sbjct:   170 DVRDIFAQQRESK 182

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

RGD|1305053 Arhgap18 "Rho GTPase activating protein 18" [Rattus norvegicus (taxid:10116)]

 Score = 127 (49.8 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 44/121 (36%), Positives = 61/121 (50%)

Query:     4 DVSQDQDFQDYWNEYRILQETKRLDEFLDEQEEAARQLE-DEGEQEAEWLSTAGLSQLSD 62
             D   +   + YW E   L+  KR  E   E +EA    E DEGE E EWL  AGLS L  
Sbjct:    30 DSLDEVSMEAYWTE---LENIKRSTENCQEGQEAIVVKEPDEGELEEEWLKEAGLSNLF- 85

Query:    63 AYRSGLEIPDADLSRA-LRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHV 121
                 G    D+  S   L  L+  QA AV++RV +++ TLR++ ++Q       PD+R +
Sbjct:    86 ----GESADDSQESIVFLSTLTRTQAAAVQKRVETVSQTLRKK-SKQYHI----PDVRDI 136

Query:   122 F 122
             F
Sbjct:   137 F 137

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MJ20 ARHGAP28 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 40/119 (33%), Positives = 59/119 (49%)

Query:    12 QDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIP 71
             +++W E   ++ET    +  +EQ  A  +  DEGE EAEWL   GLS L     SG E  
Sbjct:    54 ENFWREIESIKETSLGAQ--EEQTPAEAKPLDEGELEAEWLQDVGLSTLI----SGDE-- 105

Query:    72 DADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG 130
             + D    L  L+  QA AV++R  +   TLR++  + +R      D+R +F   E   G
Sbjct:   106 EEDGKALLSTLTRTQAAAVKKRYNTYTQTLRKKNKQSVR------DVRDIFGTSESPPG 158

GO:0005634 "nucleus" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|I3LE57 I3LE57 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 41/119 (34%), Positives = 57/119 (47%)

Query:    12 QDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIP 71
             +D+W E   ++E     +  DEQ  A  +  DEGE EAEWL   GLS L     SG E  
Sbjct:    38 EDFWRETESIKENSMGGQ--DEQTPAEVKPLDEGELEAEWLQDVGLSTLI----SGDE-- 89

Query:    72 DADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG 130
             + D    L  L+  QA AV++R  +   TLR++  +  R      D+R +F   E   G
Sbjct:    90 EEDGKALLSTLTRTQAAAVKKRYNTYTQTLRKKNKQSAR------DVRDIFGVSESPPG 142

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|I3LSP7 I3LSP7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 41/119 (34%), Positives = 57/119 (47%)

Query:    12 QDYWNEYRILQETKRLDEFLDEQEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIP 71
             +D+W E   ++E     +  DEQ  A  +  DEGE EAEWL   GLS L     SG E  
Sbjct:    38 EDFWRETESIKENSMGGQ--DEQTPAEVKPLDEGELEAEWLQDVGLSTLI----SGDE-- 89

Query:    72 DADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVERSEG 130
             + D    L  L+  QA AV++R  +   TLR++  +  R      D+R +F   E   G
Sbjct:    90 EEDGKALLSTLTRTQAAAVKKRYNTYTQTLRKKNKQSAR------DVRDIFGVSESPPG 142

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
KOG2200|consensus	674		99.61
PF00536	64	SAM_1: SAM domain (Sterile alpha motif); InterPro:	86.93

>KOG2200|consensus

Probab=99.61  E-value=6.6e-17  Score=146.16  Aligned_cols=110  Identities=29%  Similarity=0.459  Sum_probs=95.8

Q ss_pred             CccccHHHHHHHHHHHHHhhccccchhH-HHHHhhhcCchhhHHHHHHHHhChhhhHhhhhcCCCCCcchhhHHhccCCH
Q psy173            6 SQDQDFQDYWNEYRILQETKRLDEFLDE-QEEAARQLEDEGEQEAEWLSTAGLSQLSDAYRSGLEIPDADLSRALRHLSS   84 (130)
Q Consensus         6 ~~~~~m~dyW~Eve~I~~s~~~~~~~~E-~~~~~~~~~dEGE~EaeWL~dAGLs~L~~~~~~g~e~~~~d~~~~LstLTr   84 (130)
                      +++.+|++||.|.++|+..-+..   +| +....+..||+|+.|.+||+++|+|.|.+.- -|.   +.+...+|||||+
T Consensus        56 p~~ls~~sy~~~~~~i~~~~~~~---~~~~~~~~s~~pe~g~~~~e~l~~~~~s~~~~~~-v~~---~~~~~~~~s~~t~  128 (674)
T KOG2200|consen   56 PDELSMESYWPEDENIQVNWELG---QEDSGGSISLLPEEGEAEPEWLKRLGLSKLEGSR-VGI---YDEVIGSLSTLTI  128 (674)
T ss_pred             cccccccccCcccccchhccccc---ccccCcceeeccccCcccHHHHHhhccccccccc-cCC---ccccchhhccccc
Confidence            47899999999999999999887   44 6667888999999999999999999997741 232   4567899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccCCCCCCCCccccccccccc
Q psy173           85 HQAQAVRRRVLSLNHTLRQRGARQLRPKNRKPDIRHVFKDVER  127 (130)
Q Consensus        85 tQaaAV~rRv~t~n~TlR~R~k~r~~~k~~~pDvRDIF~~~~s  127 (130)
                      +|+|||+||...+-+++|+.++     +.+.|||||+|.++.+
T Consensus       129 g~~aa~~r~d~~~~~s~~~q~~-----~~~~~~Vrd~~~~~~~  166 (674)
T KOG2200|consen  129 GQLAAVERRDSFPALSLRRQHK-----GGHQPDVRDWFEPFSP  166 (674)
T ss_pred             chHHHHhhhhcchhhhhhhccC-----CCCCchHHHHhhccCC
Confidence            9999999999999999999886     3599999999998754

>PF00536 SAM_1: SAM domain (Sterile alpha motif); InterPro: IPR021129 The sterile alpha motif (SAM) domain is a putative protein interaction module present in a wide variety of proteins [] involved in many biological processes

Probab=86.93  E-value=2.7  Score=26.49  Aligned_cols=21  Identities=29%  Similarity=0.705  Sum_probs=18.0

Q ss_pred             HHHHHHHhChhhhHhhhhcCC
Q psy173           48 EAEWLSTAGLSQLSDAYRSGL   68 (130)
Q Consensus        48 EaeWL~dAGLs~L~~~~~~g~   68 (130)
                      =++||+..||+..+..|..+.
T Consensus         8 V~~WL~~~~l~~y~~~F~~~~   28 (64)
T PF00536_consen    8 VSEWLKSLGLEQYAENFEKNY   28 (64)
T ss_dssp             HHHHHHHTTGGGGHHHHHHTT
T ss_pred             HHHHHHHCCCHHHHHHHHcCC
Confidence            368999999999999996663

The SAM domain that spreads over around 70 residues is found in diverse eukaryotic organisms []. SAM domains have been shown to homo- and hetero-oligomerise, forming multiple self-association architectures and also binding to various non-SAM domain-containing proteins [], nevertheless with a low affinity constant []. SAM domains also appear to possess the ability to bind RNA []. Smaug, a protein that helps to establish a morphogen gradient in Drosophila embryos by repressing the translation of nanos (nos) mRNA, binds to the 3' untranslated region (UTR) of nos mRNA via two similar hairpin structures. The 3D crystal structure of the Smaug RNA-binding region shows a cluster of positively charged residues on the Smaug-SAM domain, which could be the RNA-binding surface. This electropositive potential is unique among all previously determined SAM-domain structures and is conserved among Smaug-SAM homologs. These results suggest that the SAM domain might have a primary role in RNA binding. Structural analyses show that the SAM domain is arranged in a small five-helix bundle with two large interfaces []. In the case of the SAM domain of EphB2, each of these interfaces is able to form dimers. The presence of these two distinct intermonomers binding surface suggest that SAM could form extended polymeric structures []. This entry represents type 1 SAM domains. ; PDB: 2KIV_A 3HIL_B 3KKA_A 3K1R_B 3SEN_B 3SEI_B 1V85_A 2KE7_A 2EAM_A 1WWV_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
2dky_A	91	RHO-GTPase-activating protein 7; cell-free protein	96.94
2h80_A	81	STAR-related lipid transfer protein 13; helical bu	96.84

>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A

Probab=96.94  E-value=0.0021  Score=45.69  Aligned_cols=62  Identities=23%  Similarity=0.361  Sum_probs=45.5

Q ss_pred             hhhHHHHHHHHhChhhhHhhhhcC-CCCCcchhhHHhccCCHHHHHHHHHHHHHHHHHHHhhc
Q psy173           44 EGEQEAEWLSTAGLSQLSDAYRSG-LEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLRQRG  105 (130)
Q Consensus        44 EGE~EaeWL~dAGLs~L~~~~~~g-~e~~~~d~~~~LstLTrtQaaAV~rRv~t~n~TlR~R~  105 (130)
                      |....-.||+.||+++-.+-|+.+ .+|+-.....==.-|-+.+-+++.||+.+||+-..+|=
T Consensus        22 eA~eAC~WLRaaGFPQYAqlyed~~FPIdi~~VkkDH~FLd~d~l~sL~RRl~tLN~Ca~Mkl   84 (91)
T 2dky_A           22 EAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMKL   84 (91)
T ss_dssp             HHHHHHHHHHHHTCTTHHHHHHTTCCSCCHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHcCChHHHHhcccccccccHHHhccCCCccCHHHHHHHHHHHHHHHHHhhhee
Confidence            344445899999999999999887 34422221222345889999999999999999877653

>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A

Probab=96.84  E-value=0.0011  Score=46.27  Aligned_cols=59  Identities=22%  Similarity=0.419  Sum_probs=41.7

Q ss_pred             hhhHHHHHHHHhChhhhHhhhhcC-CCCCcchhhHHhccCCHHHHHHHHHHHHHHHHHHH
Q psy173           44 EGEQEAEWLSTAGLSQLSDAYRSG-LEIPDADLSRALRHLSSHQAQAVRRRVLSLNHTLR  102 (130)
Q Consensus        44 EGE~EaeWL~dAGLs~L~~~~~~g-~e~~~~d~~~~LstLTrtQaaAV~rRv~t~n~TlR  102 (130)
                      |....-.||+.||+++-.+-|+.| .+|+-.....==+-|-+.+-.++.||+.+||+-..
T Consensus        20 eA~eAC~WLRaaGFPQYAqlyed~qFPIdi~~VkkDH~FLd~d~l~sL~RRl~tLN~Ca~   79 (81)
T 2h80_A           20 EAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCAS   79 (81)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTTTTCCCSCHHHHHTSCCSSCSTTHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCcHHHHHhhcccccccHHHhccCCCccCHHHHHHHHHHHHHHHhhhh
Confidence            334445899999999999999877 33321111111345778899999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d2dkya1	78	Deleted in liver cancer 1 protein, DLC-1 {Human (H	96.5
d2h80a1	71	Deleted in Liver Cancer 2, DLC2 {Human (Homo sapie	96.33

>d2dkya1 a.60.1.3 (A:8-85) Deleted in liver cancer 1 protein, DLC-1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Variant SAM domain
domain: Deleted in liver cancer 1 protein, DLC-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0024  Score=42.56  Aligned_cols=55  Identities=25%  Similarity=0.399  Sum_probs=41.4

Q ss_pred             HHHHHHHhChhhhHhhhhcCCCCCcchhhH---HhccCCHHHHHHHHHHHHHHHHHHHhh
Q psy173           48 EAEWLSTAGLSQLSDAYRSGLEIPDADLSR---ALRHLSSHQAQAVRRRVLSLNHTLRQR  104 (130)
Q Consensus        48 EaeWL~dAGLs~L~~~~~~g~e~~~~d~~~---~LstLTrtQaaAV~rRv~t~n~TlR~R  104 (130)
                      .-.||+.||+++-.+-|+.+.-  +-|+..   ==+-|-+-.-.++.||+++||+-.-+|
T Consensus        19 AC~WLraaGFpqYAqlyEd~~F--Pidi~~VkkDh~fLd~D~l~sL~RRL~tLNkCa~Mk   76 (78)
T d2dkya1          19 ACDWLRATGFPQYAQLYEDFLF--PIDISLVKREHDFLDRDAIEALCRRLNTLNKCAVMK   76 (78)
T ss_dssp             HHHHHHHHTCTTHHHHHHTTCC--SCCHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHcCChHHHHHhhccCC--CcchHHHhcCcccccHHHHHHHHHHHHHHHHHhhhc
Confidence            3479999999999999987742  234332   234578888999999999999876543

>d2h80a1 a.60.1.3 (A:11-81) Deleted in Liver Cancer 2, DLC2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: SAM domain-like
superfamily: SAM/Pointed domain
family: Variant SAM domain
domain: Deleted in Liver Cancer 2, DLC2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0013  Score=43.18  Aligned_cols=53  Identities=21%  Similarity=0.379  Sum_probs=39.2

Q ss_pred             HHHHHHhChhhhHhhhhcCCCCCcchhhHH---hccCCHHHHHHHHHHHHHHHHHHHh
Q psy173           49 AEWLSTAGLSQLSDAYRSGLEIPDADLSRA---LRHLSSHQAQAVRRRVLSLNHTLRQ  103 (130)
Q Consensus        49 aeWL~dAGLs~L~~~~~~g~e~~~~d~~~~---LstLTrtQaaAV~rRv~t~n~TlR~  103 (130)
                      -.||+.||+++-.+-|+.+.-  +-|+..+   =+-|-+-.-.++.||+++||+-..+
T Consensus        15 C~WLraaGFpqYAqlyEd~~F--Pidi~~VkkDh~fLd~D~l~sL~RRL~tLNkCa~M   70 (71)
T d2h80a1          15 CDWLRAAGFPQYAQLYEDSQF--PINIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASM   70 (71)
T ss_dssp             HHHHHHTTCHHHHHTTTTTCC--CSCHHHHHTSCCSSCSTTHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHcCChHHHHHhhhccC--CcchHHHhcccccccHHHHHHHHHHHHHHHhhhhc
Confidence            479999999999998877642  2333332   2346777789999999999987643