Psyllid ID: psy17408

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90------
Protein Sequence
MFKYCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK
Secondary Structure (PSIPRED)
ccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEccccEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccEccccccHEEEcccccccccEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEccccccc
Coil and Loop (DISEMBL)
mfkycdcksnwlpyegscnslarfvgrnnangvdlnrnfpdqfdssserreqplnvkklepETLAMISFiknnpfvlsgnlhggaivasypfddsk
Flexible Loop (DISEMBL)
mfkycdcksnwlpYEGSCNSLARFVGRNnangvdlnrnfpdqfdssserreqplnvKKLEPETLAMISFIKNNPFVLSGNLHGGAivasypfddsk
Low Complexity Region (SEG)
MFKYCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK
Disordered region (IsUnstruct)
**KYCDCKSNWLPYEGSCNSLARFVGRNNANGV*****************************TLAMISFIKNNPFVLSGNLHGGAIVASY******
Disordered Region (DISOPRED)
**************EG*CNS*ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFD***
Disordered Region (DISEMBL)
MFKYCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQF*********PLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK
Disordered Region (DISPRO)
MFKYCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFKYCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	96	2.2.26 [Sep-21-2011]
P42787	1406	Carboxypeptidase D OS=Dro	yes	N/A	0.843	0.057	0.5	1e-18
Q90240	1389	Carboxypeptidase D OS=Ana	N/A	N/A	0.656	0.045	0.541	4e-16
O89001	1377	Carboxypeptidase D OS=Mus	yes	N/A	0.656	0.045	0.527	8e-16
P83852	380	Carboxypeptidase D (Fragm	N/A	N/A	0.656	0.165	0.541	1e-15
O75976	1380	Carboxypeptidase D OS=Hom	no	N/A	0.656	0.045	0.513	1e-15
Q9JHW1	1378	Carboxypeptidase D OS=Rat	yes	N/A	0.666	0.046	0.557	2e-15
Q9EQV8	457	Carboxypeptidase N cataly	no	N/A	0.802	0.168	0.494	3e-15
P15169	458	Carboxypeptidase N cataly	no	N/A	0.802	0.168	0.494	2e-14
Q2KJ83	462	Carboxypeptidase N cataly	no	N/A	0.75	0.155	0.524	2e-14
Q9JJN5	457	Carboxypeptidase N cataly	no	N/A	0.802	0.168	0.505	5e-14

>sp|P42787|CBPD_DROME Carboxypeptidase D OS=Drosophila melanogaster GN=svr PE=1 SV=2

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 3/84 (3%)

Query: 12  LPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK 71
           L  EG+C SL  +VGR NA  +DLNR+FPD+ + S   +   L  +  +PET A++++I 
Sbjct: 150 LSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQ---LRAQSRQPETAALVNWIV 206

Query: 72  NNPFVLSGNLHGGAIVASYPFDDS 95
           + PFVLS N HGGA+VASYP+D+S
Sbjct: 207 SKPFVLSANFHGGAVVASYPYDNS 230

Required for the proper melanization and sclerotization of the cuticle.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 1EC: 7EC: .EC: 2EC: 2

>sp|Q90240|CBPD_ANAPL Carboxypeptidase D OS=Anas platyrhynchos GN=CPD PE=1 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 9/72 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGRNN+N  DLNRNFPDQF   ++           +PETLA++S++K  PFVLS NLHGG
Sbjct: 632 VGRNNSNNYDLNRNFPDQFFQVTD---------PPQPETLAVMSWLKTYPFVLSANLHGG 682

Query: 85  AIVASYPFDDSK 96
           ++V +YPFDD +
Sbjct: 683 SLVVNYPFDDDE 694

Anas platyrhynchos (taxid: 8839)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|O89001|CBPD_MOUSE Carboxypeptidase D OS=Mus musculus GN=Cpd PE=1 SV=2

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 9/72 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGRNN+N  DLNRNFPDQF   +E           +PET+A++S++K  PFVLS NLHGG
Sbjct: 622 VGRNNSNNFDLNRNFPDQFVPITE---------PTQPETIAVMSWVKAYPFVLSANLHGG 672

Query: 85  AIVASYPFDDSK 96
           ++V +YP+DD++
Sbjct: 673 SLVVNYPYDDNE 684

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|P83852|CBPD_LOPSP Carboxypeptidase D (Fragment) OS=Lophonetta specularioides GN=CPD PE=1 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 9/72 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGRNN+N  DLNRNFPDQF   ++           +PETLA++S++K  PFVLS NLHGG
Sbjct: 130 VGRNNSNNYDLNRNFPDQFFQVTD---------PPQPETLAVMSWLKTYPFVLSANLHGG 180

Query: 85  AIVASYPFDDSK 96
           ++V +YPFDD +
Sbjct: 181 SLVVNYPFDDDE 192

Lophonetta specularioides (taxid: 75873)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|O75976|CBPD_HUMAN Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 9/72 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           +GRNN+N  DLNRNFPDQF   ++           +PET+A++S++K+ PFVLS NLHGG
Sbjct: 623 IGRNNSNNFDLNRNFPDQFVQITD---------PTQPETIAVMSWMKSYPFVLSANLHGG 673

Query: 85  AIVASYPFDDSK 96
           ++V +YPFDD +
Sbjct: 674 SLVVNYPFDDDE 685

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|Q9JHW1|CBPD_RAT Carboxypeptidase D OS=Rattus norvegicus GN=Cpd PE=2 SV=2

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 53/70 (75%), Gaps = 6/70 (8%)

Query: 26  GRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA 85
           GR+N+ G DLNR+FPDQF +      +P ++ ++ PE  A+I +I+ N FVLSGNLHGG+
Sbjct: 207 GRDNSRGRDLNRSFPDQFSTG-----EPPSLDEV-PEVRALIDWIRRNKFVLSGNLHGGS 260

Query: 86  IVASYPFDDS 95
           +VASYPFDDS
Sbjct: 261 VVASYPFDDS 270

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 2

EC: 2

>sp|Q9EQV8|CBPN_RAT Carboxypeptidase N catalytic chain OS=Rattus norvegicus GN=Cpn1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 10/87 (11%)

Query: 19  NSLARFVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMIS 68
           N+    VGRNNANGVDLNRNFPD         ++   +     P N K ++EPET A+I 
Sbjct: 143 NTSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKYGGPNHHLPLPDNWKSQVEPETRAVIQ 202

Query: 69  FIKNNPFVLSGNLHGGAIVASYPFDDS 95
           +I++  FVLS N+HGGA+VA+YP+D S
Sbjct: 203 WIRSLNFVLSANMHGGAVVANYPYDKS 229

Protects the body from potent vasoactive and inflammatory peptides containing C-terminal Arg or Lys (such as kinins or anaphylatoxins) which are released into the circulation.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 3

>sp|P15169|CBPN_HUMAN Carboxypeptidase N catalytic chain OS=Homo sapiens GN=CPN1 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 10/87 (11%)

Query: 19  NSLARFVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMIS 68
           N     VGRNNANGVDLNRNFPD         ++   +     P N K ++EPET A+I 
Sbjct: 143 NKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIR 202

Query: 69  FIKNNPFVLSGNLHGGAIVASYPFDDS 95
           ++ +  FVLS NLHGGA+VA+YP+D S
Sbjct: 203 WMHSFNFVLSANLHGGAVVANYPYDKS 229

Protects the body from potent vasoactive and inflammatory peptides containing C-terminal Arg or Lys (such as kinins or anaphylatoxins) which are released into the circulation.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 3

>sp|Q2KJ83|CBPN_BOVIN Carboxypeptidase N catalytic chain OS=Bos taurus GN=CPN1 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 10/82 (12%)

Query: 24  FVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMISFIKNN 73
            VGRNNANGVDLNRNFPD         +    +     P N K ++EPET A+I +I++ 
Sbjct: 148 LVGRNNANGVDLNRNFPDLNTYIYYNEKNGGPNHHFPLPDNWKSQVEPETQAVIQWIRSF 207

Query: 74  PFVLSGNLHGGAIVASYPFDDS 95
            FVLS NLHGGA+VA+YP+D S
Sbjct: 208 NFVLSANLHGGAVVANYPYDKS 229

Protects the body from potent vasoactive and inflammatory peptides containing C-terminal Arg or Lys (such as kinins or anaphylatoxins) which are released into the circulation.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 3

>sp|Q9JJN5|CBPN_MOUSE Carboxypeptidase N catalytic chain OS=Mus musculus GN=Cpn1 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 10/87 (11%)

Query: 19  NSLARFVGRNNANGVDLNRNFPD-----QFDSSS----ERREQPLNVK-KLEPETLAMIS 68
           N     VGRNNANGVDLNRNFPD      ++S +         P N K ++EPET A+I 
Sbjct: 143 NMSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKNGGPNHHLPLPDNWKSQVEPETRAVIQ 202

Query: 69  FIKNNPFVLSGNLHGGAIVASYPFDDS 95
           +I++  FVLS N+HGGA+VA+YP+D S
Sbjct: 203 WIRSLNFVLSANMHGGAVVANYPYDKS 229

Protects the body from potent vasoactive and inflammatory peptides containing C-terminal Arg or Lys (such as kinins or anaphylatoxins) which are released into the circulation.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 7

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
242015953	1268	carboxypeptidase D precursor, putative [	0.802	0.060	0.641	9e-23
312385094	1268	hypothetical protein AND_01175 [Anophele	0.812	0.061	0.580	2e-20
347967818	1457	AGAP002414-PA [Anopheles gambiae str. PE	0.812	0.053	0.555	6e-19
345490273	1668	PREDICTED: carboxypeptidase D-like [Naso	0.75	0.043	0.569	2e-18
332374584	433	unknown [Dendroctonus ponderosae]	0.802	0.177	0.580	2e-18
403183363	1457	AAEL017499-PA [Aedes aegypti]	0.812	0.053	0.567	4e-18
321464268	1292	hypothetical protein DAPPUDRAFT_250728 [	0.843	0.062	0.578	4e-18
194768873	1607	GF21938 [Drosophila ananassae] gi|190617	0.843	0.050	0.535	5e-18
380020297	1671	PREDICTED: carboxypeptidase D-like [Apis	0.822	0.047	0.575	6e-18
328785691	1612	PREDICTED: carboxypeptidase D-like [Apis	0.822	0.049	0.575	6e-18

>gi|242015953|ref|XP_002428607.1| carboxypeptidase D precursor, putative [Pediculus humanus corporis] gi|212513251|gb|EEB15869.1| carboxypeptidase D precursor, putative [Pediculus humanus corporis]

 Score =  110 bits (276), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 66/81 (81%), Gaps = 4/81 (4%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG+C+SL  FVGR NANG+DLNR+FPDQFD   +R     +++K +PETLAM+ +I  NP
Sbjct: 151 EGNCDSLPGFVGRTNANGIDLNRDFPDQFDYIFKRP----SIRKYQPETLAMMKWIVQNP 206

Query: 75  FVLSGNLHGGAIVASYPFDDS 95
           FVLSGNLHGGA+VASYPFD++
Sbjct: 207 FVLSGNLHGGAVVASYPFDNA 227

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312385094|gb|EFR29672.1| hypothetical protein AND_01175 [Anopheles darlingi]

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/81 (58%), Positives = 64/81 (79%), Gaps = 3/81 (3%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG C S + +VGR NA  VDLNR+FPD+FD+ + RR   L ++  +PET A++++I+NNP
Sbjct: 154 EGVCESPSSYVGRYNAANVDLNRDFPDRFDNKNTRR---LRLQNQQPETTAVMNWIQNNP 210

Query: 75  FVLSGNLHGGAIVASYPFDDS 95
           FVLS NLHGGA+VASYP+D+S
Sbjct: 211 FVLSANLHGGAVVASYPYDNS 231

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967818|ref|XP_312538.5| AGAP002414-PA [Anopheles gambiae str. PEST] gi|333468289|gb|EAA07478.5| AGAP002414-PA [Anopheles gambiae str. PEST]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 3/81 (3%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG C S   +VGR NA  VDLNR+FPD+FD    R ++   ++  +PET+A++++I NNP
Sbjct: 165 EGVCESPPDYVGRYNAANVDLNRDFPDRFDDERTRHQR---MRNRQPETVAVMNWILNNP 221

Query: 75  FVLSGNLHGGAIVASYPFDDS 95
           FVLS NLHGGA+VASYP+D+S
Sbjct: 222 FVLSANLHGGAVVASYPYDNS 242

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490273|ref|XP_003426341.1| PREDICTED: carboxypeptidase D-like [Nasonia vitripennis]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 55/79 (69%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG CNSL  ++GR NAN VDLNRNFPDQFD      +    +   + ET+AM+++I   P
Sbjct: 148 EGMCNSLENYIGRENANHVDLNRNFPDQFDPRVNHVKGGKLIAGRQSETVAMMTWIVTQP 207

Query: 75  FVLSGNLHGGAIVASYPFD 93
           FVLS N HGGA+VASYPFD
Sbjct: 208 FVLSANFHGGAVVASYPFD 226

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374584|gb|AEE62433.1| unknown [Dendroctonus ponderosae]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/81 (58%), Positives = 58/81 (71%), Gaps = 4/81 (4%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG C S  R+VGR N N VDLNR+FPDQF    E       +   +PET+AM+++I + P
Sbjct: 147 EGLCESKPRYVGRENENSVDLNRDFPDQF----EPHRAGTILSGRQPETVAMMTWIISRP 202

Query: 75  FVLSGNLHGGAIVASYPFDDS 95
           FVLSGNLHGGA+VASYP+DDS
Sbjct: 203 FVLSGNLHGGAVVASYPYDDS 223

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403183363|gb|EJY58039.1| AAEL017499-PA [Aedes aegypti]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 3/81 (3%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EGSC S   ++GR NA GVDLNR+FPD+FD+   R    +   + +PET A++S+I +NP
Sbjct: 165 EGSCESPPNYMGRYNAAGVDLNRDFPDRFDNDRVRH---MRRNRQQPETAAVMSWILSNP 221

Query: 75  FVLSGNLHGGAIVASYPFDDS 95
           FVLS NLHGGA+VASYP+D+S
Sbjct: 222 FVLSANLHGGAVVASYPYDNS 242

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321464268|gb|EFX75277.1| hypothetical protein DAPPUDRAFT_250728 [Daphnia pulex]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 2/83 (2%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFD--SSSERREQPLNVKKLEPETLAMISFIKN 72
           EG C       GR NAN VDLNRNFPD+ +   S +  E+ L +K  EPETLA++ +I N
Sbjct: 102 EGDCFGANSASGRENANNVDLNRNFPDRLEIKGSPKTVEEELFIKGREPETLAIMLWIVN 161

Query: 73  NPFVLSGNLHGGAIVASYPFDDS 95
           NPFVLS NLHGG++VASYPFDD+
Sbjct: 162 NPFVLSANLHGGSVVASYPFDDT 184

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194768873|ref|XP_001966535.1| GF21938 [Drosophila ananassae] gi|190617299|gb|EDV32823.1| GF21938 [Drosophila ananassae]

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 3/84 (3%)

Query: 12  LPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK 71
           L  EGSC SL  +VGR NANGVDLNR+FPD+ + +     Q    +  +PET A+ ++I 
Sbjct: 315 LSQEGSCESLPNYVGRGNANGVDLNRDFPDRLEQAYV---QHYRAQSRQPETAALANWIL 371

Query: 72  NNPFVLSGNLHGGAIVASYPFDDS 95
           + PFVLS N HGGA+VASYP+D+S
Sbjct: 372 SKPFVLSANFHGGAVVASYPYDNS 395

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020297|ref|XP_003694026.1| PREDICTED: carboxypeptidase D-like [Apis florea]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV-KKLEPETLAMISFIKNN 73
           EG C S   F GR NAN VDLNRNFPDQFD  +   ++  N+    + ET+AM+++I   
Sbjct: 153 EGKCESKKDFSGRENANHVDLNRNFPDQFDRRTNHLQKGGNILDGRQNETVAMMTWIATE 212

Query: 74  PFVLSGNLHGGAIVASYPFD 93
           PFVLSGNLHGGA+VASYP+D
Sbjct: 213 PFVLSGNLHGGAVVASYPYD 232

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785691|ref|XP_003250638.1| PREDICTED: carboxypeptidase D-like [Apis mellifera]

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV-KKLEPETLAMISFIKNN 73
           EG C S   F GR NAN VDLNRNFPDQFD  +   ++  N+    + ET+AM+++I   
Sbjct: 153 EGKCESKKDFSGRENANHVDLNRNFPDQFDRRTNHLQKGGNILDGRQNETVAMMTWIATE 212

Query: 74  PFVLSGNLHGGAIVASYPFD 93
           PFVLSGNLHGGA+VASYP+D
Sbjct: 213 PFVLSGNLHGGAVVASYPYD 232

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	96
FB|FBgn0004648	1406	svr "silver" [Drosophila melan	0.843	0.057	0.5	3.5e-17
UNIPROTKB|P83852	380	CPD "Carboxypeptidase D" [Loph	0.656	0.165	0.555	3.3e-15
ZFIN|ZDB-GENE-081112-2	1350	cpda "carboxypeptidase D, a" [	0.75	0.053	0.543	7.3e-15
UNIPROTKB|E1C7M0	453	CPN1 "Uncharacterized protein"	0.812	0.172	0.522	1.2e-14
RGD|70931	457	Cpn1 "carboxypeptidase N, poly	0.802	0.168	0.528	1.5e-14
UNIPROTKB|Q9EQV8	457	Cpn1 "Carboxypeptidase N catal	0.802	0.168	0.528	1.5e-14
MGI|MGI:2135874	457	Cpn1 "carboxypeptidase N, poly	0.802	0.168	0.517	2e-14
UNIPROTKB|F6XTZ1	376	CPN1 "Uncharacterized protein"	0.802	0.204	0.528	2.5e-14
UNIPROTKB|E1BLR9	1108	LOC532189 "Uncharacterized pro	0.697	0.060	0.526	2.5e-14
ZFIN|ZDB-GENE-041210-191	446	cpm "carboxypeptidase M" [Dani	0.770	0.165	0.5	3.1e-14

FB|FBgn0004648 svr "silver" [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 3.5e-17, P = 3.5e-17
 Identities = 42/84 (50%), Positives = 59/84 (70%)

Query:    12 LPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK 71
             L  EG+C SL  +VGR NA  +DLNR+FPD+ + S   +   L  +  +PET A++++I 
Sbjct:   150 LSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQ---LRAQSRQPETAALVNWIV 206

Query:    72 NNPFVLSGNLHGGAIVASYPFDDS 95
             + PFVLS N HGGA+VASYP+D+S
Sbjct:   207 SKPFVLSANFHGGAVVASYPYDNS 230

GO:0004181 "metallocarboxypeptidase activity" evidence=IDA;NAS

GO:0040003 "chitin-based cuticle development" evidence=NAS

GO:0006508 "proteolysis" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IDA

GO:0004180 "carboxypeptidase activity" evidence=IMP;IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0007616 "long-term memory" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

UNIPROTKB|P83852 CPD "Carboxypeptidase D" [Lophonetta specularioides (taxid:75873)]

 Score = 197 (74.4 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 40/72 (55%), Positives = 52/72 (72%)

Query:    25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
             VGRNN+N  DLNRNFPDQF   ++    P      +PETLA++S++K  PFVLS NLHGG
Sbjct:   130 VGRNNSNNYDLNRNFPDQFFQVTD---PP------QPETLAVMSWLKTYPFVLSANLHGG 180

Query:    85 AIVASYPFDDSK 96
             ++V +YPFDD +
Sbjct:   181 SLVVNYPFDDDE 192

GO:0004181 "metallocarboxypeptidase activity" evidence=ISS

GO:0006508 "proteolysis" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISS

ZFIN|ZDB-GENE-081112-2 cpda "carboxypeptidase D, a" [Danio rerio (taxid:7955)]

 Score = 203 (76.5 bits), Expect = 7.3e-15, P = 7.3e-15
 Identities = 44/81 (54%), Positives = 55/81 (67%)

Query:    15 EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
             EG C  L +  GR+NA  +DLNR+FPDQF+      E  LN + + PE  A+I +I  N 
Sbjct:   160 EGDC--LGKDEGRHNAKNIDLNRSFPDQFE------EIHLNAEDI-PEVTAVIKWILENK 210

Query:    75 FVLSGNLHGGAIVASYPFDDS 95
             FVLSGNLHGG +VASYP+DDS
Sbjct:   211 FVLSGNLHGGTVVASYPYDDS 231

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

UNIPROTKB|E1C7M0 CPN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 194 (73.4 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 46/88 (52%), Positives = 58/88 (65%)

Query:    19 NSLARFVGRNNANGVDLNRNFPD--QF-----DSSSERREQPL--NVK-KLEPETLAMIS 68
             + +    GRNNANGVDLNRNFPD   F     + S      PL  N K ++EPETLA+I 
Sbjct:   143 DGIGYLTGRNNANGVDLNRNFPDLNTFMYYSGEISGPNHHIPLPDNWKSQVEPETLAVIQ 202

Query:    69 FIKNNPFVLSGNLHGGAIVASYPFDDSK 96
             +I +  FVLS NLHGGA+VA+YP+D S+
Sbjct:   203 WIGSYNFVLSANLHGGAVVANYPYDKSQ 230

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|70931 Cpn1 "carboxypeptidase N, polypeptide 1" [Rattus norvegicus (taxid:10116)]

 Score = 193 (73.0 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 46/87 (52%), Positives = 59/87 (67%)

Query:    19 NSLARFVGRNNANGVDLNRNFPD---QFDSSSE----RREQPL--NVK-KLEPETLAMIS 68
             N+    VGRNNANGVDLNRNFPD    F  +S+        PL  N K ++EPET A+I 
Sbjct:   143 NTSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKYGGPNHHLPLPDNWKSQVEPETRAVIQ 202

Query:    69 FIKNNPFVLSGNLHGGAIVASYPFDDS 95
             +I++  FVLS N+HGGA+VA+YP+D S
Sbjct:   203 WIRSLNFVLSANMHGGAVVANYPYDKS 229

GO:0004180 "carboxypeptidase activity" evidence=ISO;IDA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA;IDA

GO:0006508 "proteolysis" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051384 "response to glucocorticoid stimulus" evidence=IDA

UNIPROTKB|Q9EQV8 Cpn1 "Carboxypeptidase N catalytic chain" [Rattus norvegicus (taxid:10116)]

 Score = 193 (73.0 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 46/87 (52%), Positives = 59/87 (67%)

Query:    19 NSLARFVGRNNANGVDLNRNFPD---QFDSSSE----RREQPL--NVK-KLEPETLAMIS 68
             N+    VGRNNANGVDLNRNFPD    F  +S+        PL  N K ++EPET A+I 
Sbjct:   143 NTSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKYGGPNHHLPLPDNWKSQVEPETRAVIQ 202

Query:    69 FIKNNPFVLSGNLHGGAIVASYPFDDS 95
             +I++  FVLS N+HGGA+VA+YP+D S
Sbjct:   203 WIRSLNFVLSANMHGGAVVANYPYDKS 229

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:2135874 Cpn1 "carboxypeptidase N, polypeptide 1" [Mus musculus (taxid:10090)]

 Score = 192 (72.6 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 45/87 (51%), Positives = 58/87 (66%)

Query:    19 NSLARFVGRNNANGVDLNRNFPD-----QFDSSS--ERREQPL--NVK-KLEPETLAMIS 68
             N     VGRNNANGVDLNRNFPD      ++S +       PL  N K ++EPET A+I 
Sbjct:   143 NMSGYLVGRNNANGVDLNRNFPDLNTYFYYNSKNGGPNHHLPLPDNWKSQVEPETRAVIQ 202

Query:    69 FIKNNPFVLSGNLHGGAIVASYPFDDS 95
             +I++  FVLS N+HGGA+VA+YP+D S
Sbjct:   203 WIRSLNFVLSANMHGGAVVANYPYDKS 229

GO:0004180 "carboxypeptidase activity" evidence=ISO;IDA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005615 "extracellular space" evidence=ISO

GO:0006508 "proteolysis" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA;IDA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051384 "response to glucocorticoid stimulus" evidence=ISO

UNIPROTKB|F6XTZ1 CPN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 189 (71.6 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 46/87 (52%), Positives = 59/87 (67%)

Query:    19 NSLARFVGRNNANGVDLNRNFPD--QFDSSSERR-----EQPL--NVK-KLEPETLAMIS 68
             +S    VGRNNANGVDLNRNFPD   +   +E+        PL  N K ++EPET A+I 
Sbjct:    72 DSSGYLVGRNNANGVDLNRNFPDLNTYIYYNEKHGGPNHHLPLPDNWKSQVEPETQAVIH 131

Query:    69 FIKNNPFVLSGNLHGGAIVASYPFDDS 95
             +I++  FVLS NLHGGA+VA+YP+D S
Sbjct:   132 WIRSFNFVLSANLHGGAVVANYPYDKS 158

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

UNIPROTKB|E1BLR9 LOC532189 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 197 (74.4 bits), Expect = 2.5e-14, P = 2.5e-14
 Identities = 40/76 (52%), Positives = 52/76 (68%)

Query:    21 LARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGN 80
             L   +GRNN+N  DLNRNFPDQF   +E    P      +PET+A++S++K  PFVLS N
Sbjct:   617 LVSVIGRNNSNNFDLNRNFPDQFVQITE----PT-----QPETIAVMSWMKTYPFVLSAN 667

Query:    81 LHGGAIVASYPFDDSK 96
             LHGG +V +YPFDD +
Sbjct:   668 LHGGTLVVNYPFDDDE 683

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

ZFIN|ZDB-GENE-041210-191 cpm "carboxypeptidase M" [Danio rerio (taxid:7955)]

 Score = 190 (71.9 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 41/82 (50%), Positives = 53/82 (64%)

Query:    14 YEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN 73
             +E S       VGR N NGVDLNRNFPD F+  +E+        K E E  A++ ++K+ 
Sbjct:   129 FESSKPDCIYTVGRYNKNGVDLNRNFPDAFEEGNEQ--------KRESEVRAVMEWLKSE 180

Query:    74 PFVLSGNLHGGAIVASYPFDDS 95
              FVLS NLHGGA+VASYP+D+S
Sbjct:   181 TFVLSANLHGGALVASYPYDNS 202

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9JHW1	CBPD_RAT	3, ., 4, ., 1, 7, ., 2, 2	0.5571	0.6666	0.0464	yes	N/A
O89001	CBPD_MOUSE	3, ., 4, ., 1, 7, ., 2, 2	0.5277	0.6562	0.0457	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	96
cd03868	293	cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase	4e-34
cd03858	293	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep	7e-33
cd03864	313	cd03864, M14_CPN, Peptidase M14 carboxypeptidase s	2e-22
cd03866	292	cd03866, M14_CPM, Peptidase M14 carboxypeptidase s	7e-22
cd03863	296	cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas	1e-20
pfam00246	277	pfam00246, Peptidase_M14, Zinc carboxypeptidase	4e-20
cd03865	323	cd03865, M14_CPE, Peptidase M14 carboxypeptidase s	1e-17
smart00631	277	smart00631, Zn_pept, Zn_pept domain	2e-17
cd03867	315	cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s	2e-17
cd00596	211	cd00596, Peptidase_M14_like, M14 family of metallo	1e-14
cd03869	326	cd03869, M14_CPX_like, Peptidase M14 carboxypeptid	3e-13
cd06245	284	cd06245, M14_CPD_III, Peptidase M14 carboxypeptida	5e-09
cd06229	256	cd06229, M14_Endopeptidase_I, Peptidase M14 carbox	3e-08
cd06904	178	cd06904, M14_MpaA_like, Peptidase M14-like domain	4e-07
PRK10602	237	PRK10602, PRK10602, murein peptide amidase A; Prov	1e-06
cd03862	273	cd03862, M14-like_7, Peptidase M14-like domain; un	1e-05
cd06227	269	cd06227, M14-like_2, Peptidase M14-like domain; un	2e-05
cd06905	360	cd06905, M14-like_8, Peptidase M14-like domain; un	3e-04
cd03860	293	cd03860, M14_CP_A-B_like, Peptidase M14 carboxypep	3e-04

>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup

 Score =  118 bits (297), Expect = 4e-34
 Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 7/82 (8%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           EG C S   + GR NAN VDLNRNFPDQF+    R       ++ +PETLAMI++I++NP
Sbjct: 114 EGDC-SCGGYGGRGNANNVDLNRNFPDQFEGKHVR------AQERQPETLAMINWIRSNP 166

Query: 75  FVLSGNLHGGAIVASYPFDDSK 96
           FVLS NLHGG++VASYP+DDS 
Sbjct: 167 FVLSANLHGGSVVASYPYDDSS 188

The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly. Length = 293

>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like

 Score =  114 bits (288), Expect = 7e-33
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 9/83 (10%)

Query: 14  YEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN 73
            EG C  +    GR NANGVDLNRNFPD F           + +  +PET A++ +IK+ 
Sbjct: 113 QEGDCGGV---TGRANANGVDLNRNFPDLF------ATIYSDNEPRQPETKAVMKWIKSI 163

Query: 74  PFVLSGNLHGGAIVASYPFDDSK 96
           PFVLS NLHGGA+VA+YP+DD+ 
Sbjct: 164 PFVLSANLHGGALVANYPYDDTP 186

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293

>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup

 Score = 87.7 bits (217), Expect = 2e-22
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 10/83 (12%)

Query: 24  FVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMISFIKNN 73
            VGRNNANGVDLNRNFPD         ++   +     P N K ++EPETLA+I +++N 
Sbjct: 124 LVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNWKSQVEPETLAVIQWMQNY 183

Query: 74  PFVLSGNLHGGAIVASYPFDDSK 96
            FVLS NLHGGA+VA+YP+D S+
Sbjct: 184 NFVLSANLHGGAVVANYPYDKSR 206

Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN. Length = 313

>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup

 Score = 86.1 bits (213), Expect = 7e-22
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 9/71 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGR N NG DLNRNFPD F+ ++E+R+         PET A++ ++K+  FVLS NLHGG
Sbjct: 124 VGRYNKNGYDLNRNFPDAFEENNEQRQ---------PETRAVMEWLKSETFVLSANLHGG 174

Query: 85  AIVASYPFDDS 95
           A+VASYP+D+ 
Sbjct: 175 ALVASYPYDNG 185

Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor. Length = 292

>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup

 Score = 83.1 bits (205), Expect = 1e-20
 Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 9/70 (12%)

Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGRNN+N  DLNRNFPDQF   ++           +PETLA++S++K  PFVLS NLHGG
Sbjct: 128 VGRNNSNNYDLNRNFPDQFFQITD---------PPQPETLAVMSWLKTYPFVLSANLHGG 178

Query: 85  AIVASYPFDD 94
           ++V +YPFDD
Sbjct: 179 SLVVNYPFDD 188

The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 296

>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase

 Score = 80.9 bits (200), Expect = 4e-20
 Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 25  VGRNNANGVDLNRNFPDQFDS-------SSERREQPLNVKKLEPETLAMISFIKNNPFVL 77
             R+NANGVDLNRNFPD ++         SE    P      EPET A+  FI++  F L
Sbjct: 111 KNRSNANGVDLNRNFPDLWNEVGASSNPCSETYRGP--APFSEPETRAVADFIRSYKFKL 168

Query: 78  SGNLHGGAIVASYPFDDSK 96
             +LHG + +  YP+  + 
Sbjct: 169 YIDLHGYSQLILYPYGYTY 187

Length = 277

>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup

 Score = 75.4 bits (185), Expect = 1e-17
 Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 14/87 (16%)

Query: 24  FVGRNNANGVDLNRNFPD--QFDSSSERREQPLN------------VKKLEPETLAMISF 69
           FVGR+NA G+DLNRNFPD  +    +ER   P N              KL PET A+I +
Sbjct: 128 FVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAVIHW 187

Query: 70  IKNNPFVLSGNLHGGAIVASYPFDDSK 96
           I + PFVLS NLHGG +VA+YP+D+++
Sbjct: 188 IMDIPFVLSANLHGGDLVANYPYDETR 214

Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice. Length = 323

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score = 73.9 bits (182), Expect = 2e-17
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 11/77 (14%)

Query: 27  RNNANGVDLNRNFPDQFDSSSE------RREQPLNVKKLEPETLAMISFIKNN-PFVLSG 79
            +N  GVDLNRNFP  +  +            P +    EPET A+  FI++N  F L  
Sbjct: 123 NSNCRGVDLNRNFPFHWGETGNPCSETYAGPSPFS----EPETKAVRDFIRSNRRFKLYI 178

Query: 80  NLHGGAIVASYPFDDSK 96
           +LH  + +  YP+  +K
Sbjct: 179 DLHSYSQLILYPYGYTK 195

Length = 277

>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup

 Score = 74.1 bits (182), Expect = 2e-17
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 12/83 (14%)

Query: 26  GRNNANGVDLNRNFPDQFDSSSERREQPLN------------VKKLEPETLAMISFIKNN 73
           GR NA  +DLNRNFPD       RR Q                 K+ PET A++ ++++ 
Sbjct: 126 GRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSI 185

Query: 74  PFVLSGNLHGGAIVASYPFDDSK 96
           PFVLS +LHGG +V SYP+D S+
Sbjct: 186 PFVLSASLHGGDLVVSYPYDFSR 208

Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling. Length = 315

>gnl|CDD|199839 cd00596, Peptidase_M14_like, M14 family of metallocarboxypeptidases and related proteins

 Score = 65.2 bits (159), Expect = 1e-14
 Identities = 29/69 (42%), Positives = 35/69 (50%)

Query: 27  RNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAI 86
           R NANGVDLNRNFP  +                EPET A+ + IK   F L  NLH G++
Sbjct: 60  RGNANGVDLNRNFPGIWGKRGAPETYGGPAPLSEPETRALAALIKQRKFDLVINLHSGSL 119

Query: 87  VASYPFDDS 95
              YP+  S
Sbjct: 120 AILYPYGHS 128

The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 211

>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup

 Score = 62.9 bits (153), Expect = 3e-13
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 18/86 (20%)

Query: 26  GRNNANGVDLNRNFPDQFD---SSSERREQPLNVKK---------------LEPETLAMI 67
           GR    G+D+N NFPD       + E++  P  V                 + PET A+I
Sbjct: 130 GRWTEEGIDINHNFPDLNTILWEAEEKKWVPRKVPNHHIPIPEWYLSPNATVAPETRAVI 189

Query: 68  SFIKNNPFVLSGNLHGGAIVASYPFD 93
           ++++  PFVL  NL GG +V SYP+D
Sbjct: 190 AWMEKIPFVLGANLQGGELVVSYPYD 215

Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing. Length = 326

>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup

 Score = 51.0 bits (122), Expect = 5e-09
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 12/79 (15%)

Query: 15  EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP 74
           E  C S     G  NA+G DL+ +F     + S   +         PET A+I  +    
Sbjct: 115 EKQCTSK---EGHTNAHGKDLDTDFTSNASNMSADSQ---------PETKAIIDNLIQKD 162

Query: 75  FVLSGNLHGGAIVASYPFD 93
           F LS  L GG++VA+YP+D
Sbjct: 163 FTLSVALDGGSVVATYPYD 181

The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 284

>gnl|CDD|199855 cd06229, M14_Endopeptidase_I, Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 15/58 (25%)

Query: 29  NANGVDLNRNFPDQFDSSSERR-----------EQPLNVKKLEPETLAMISFIKNNPF 75
           NA GVDLNRNFP  ++    R            E PL+    EPET A+  F + N F
Sbjct: 111 NARGVDLNRNFPAGWELEKARGPKAPSPRNYGGEYPLS----EPETKALAEFTRENRF 164

Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments. Length = 256

>gnl|CDD|133114 cd06904, M14_MpaA_like, Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 10/52 (19%)

Query: 26 GRNNANGVDLNRNFPDQF---DSSSERRE---QPLNVKKLEPETLAMISFIK 71
           R NANGVDLNRNFP +     +S  RR    +P      EPE+ A++  I+
Sbjct: 50 TRCNANGVDLNRNFPTKDWPPGASRYRRYPGPKPG----SEPESRALMDLIE 97

Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway. Length = 178

>gnl|CDD|182582 PRK10602, PRK10602, murein peptide amidase A; Provisional

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 23/71 (32%)

Query: 27  RNNANGVDLNRNFPDQ----------FDSSSERR-------EQPLNVKKLEPETLAMISF 69
           R NANGVDLNRNFP            ++S++E R       ++P      EPET A+   
Sbjct: 89  RANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKP----GSEPETQALCQL 144

Query: 70  IK--NNPFVLS 78
           I      +V+S
Sbjct: 145 IHRLQPAWVVS 155

Length = 237

>gnl|CDD|133073 cd03862, M14-like_7, Peptidase M14-like domain; uncharacterized subfamily

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 24/78 (30%)

Query: 27  RNNANGVDLNRNFPDQFDSSSERREQPL----------------NVKKLEPETLAMISFI 70
           R+N NGVDL RN P      +E +   L                N   +E E  A+  F+
Sbjct: 86  RSNGNGVDLMRNAPVD----AEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFV 141

Query: 71  KN----NPFVLSGNLHGG 84
           +     +PF ++ + H G
Sbjct: 142 RELLFESPFSIALDCHSG 159

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 273

>gnl|CDD|199854 cd06227, M14-like_2, Peptidase M14-like domain; uncharacterized subfamily

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 27  RNNANGVDLNRNFPDQFD---SSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG 83
           R N NGVDLNRN+   +          E        EPET A+   +K+    +  ++H 
Sbjct: 122 RENENGVDLNRNYGADWGFKEDDYPDEEYSGPAPFSEPETRAVRDLLKSFSPHVFISVHS 181

Query: 84  GAIVASYPFDDSK 96
           G +    P+   K
Sbjct: 182 GTLALFTPYAYKK 194

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 269

>gnl|CDD|199875 cd06905, M14-like_8, Peptidase M14-like domain; uncharacterized subfamily

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 14/69 (20%)

Query: 30  ANGVDLNRNFPDQFDSSSERREQ-----PLNVKKLEPETLAMISFIKNNPFV---LSGNL 81
             G+D NRNFP   D   E  +      P +    EPET A++ FI ++P +   +S + 
Sbjct: 207 LQGLDFNRNFP--VDWRPEGEQYGAGPFPFS----EPETRAVVDFITDHPNINGAISYHT 260

Query: 82  HGGAIVASY 90
             G I+  Y
Sbjct: 261 FSGVILRPY 269

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 360

>gnl|CDD|199844 cd03860, M14_CP_A-B_like, Peptidase M14 carboxypeptidase subfamily A/B-like

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 13/52 (25%)

Query: 32  GVDLNRNFPDQFD---SSSE------RREQPLNVKKLEPETLAMISFIKNNP 74
           GVDLNRNF   +    +SS             +    EPET A+  F+ +  
Sbjct: 127 GVDLNRNFDFHWGGEGASSNPCSETYAGPSAFS----EPETRAVRDFLLSLA 174

The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	96
cd03869	405	M14_CPX_like Peptidase M14-like domain of carboxyp	99.95
cd06246	300	M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (C	99.95
cd03870	301	M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA	99.94
cd03872	300	M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also know	99.94
KOG2650|consensus	418		99.94
cd06247	298	M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO	99.94
cd03864	392	M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als	99.93
cd06227	272	Peptidase_M14-like_2 A functionally uncharacterize	99.93
cd03871	300	M14_CPB Peptidase M14 Carboxypeptidase B (CPB) bel	99.93
cd06228	332	Peptidase_M14-like_3 A functionally uncharacterize	99.93
cd03867	395	M14_CPZ Peptidase M14-like domain of carboxypeptid	99.93
cd06248	304	M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/	99.93
cd06226	293	M14_CPT_like Peptidase M14-like domain of an uncha	99.93
cd03868	372	M14_CPD_I The first carboxypeptidase (CP)-like dom	99.92
cd03859	295	M14_CPT Peptidase M14-like domain of carboxypeptid	99.92
cd03863	375	M14_CPD_II The second carboxypeptidase (CP)-like d	99.92
cd06245	363	M14_CPD_III The third carboxypeptidase (CP)-like d	99.91
cd03865	402	M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C	99.91
smart00631	277	Zn_pept Zn_pept.	99.91
cd03858	374	M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub	99.91
cd06229	255	M14_Endopeptidase_I Peptidase M14-like domain of G	99.91
cd03860	294	M14_CP_A-B_like The Peptidase M14 Carboxypeptidase	99.9
cd03866	376	M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM	99.9
cd06905	360	Peptidase_M14-like_8 A functionally uncharacterize	99.9
PF00246	279	Peptidase_M14: Zinc carboxypeptidase This is famil	99.86
cd03862	273	Peptidase_M14-like_7 A functionally uncharacterize	99.86
KOG2649|consensus	500		99.84
cd06904	178	M14_MpaA_like Peptidase M14-like domain of Escheri	99.74
cd00596	196	Peptidase_M14_like The M14 family of metallocarbox	99.67
PRK10602	237	murein peptide amidase A; Provisional	99.67
cd06237	244	M14_Nna1_like_3 A bacterial subgroup of the Peptid	99.64
cd06908	261	M14_AGBL4_like Peptidase M14-like domain of ATP/GT	99.58
cd06234	263	M14_Nna1_like_1 A bacterial subgroup of the Peptid	99.58
cd03856	269	M14_Nna1_like Peptidase M14-like domain of Nna-1 (	99.45
cd06238	271	Peptidase_M14-like_1_1 Peptidase M14-like domain o	99.4
cd06235	258	M14_Nna1_like_2 Subgroup of the Peptidase M14-like	99.35
cd06239	231	Peptidase_M14-like_1_2 Peptidase M14-like domain o	99.32
cd06244	268	Peptidase_M14-like_1_7 Peptidase M14-like domain o	99.29
cd06243	236	Peptidase_M14-like_1_6 Peptidase M14-like domain o	99.2
cd06241	266	Peptidase_M14-like_1_4 Peptidase M14-like domain o	99.15
cd06236	304	M14_AGBL5_like Peptidase M14-like domain of ATP/GT	99.15
cd03857	226	Peptidase_M14-like_1 Peptidase M14-like domain of	99.15
cd06231	236	Peptidase_M14-like_4 A functionally uncharacterize	99.02
cd06907	261	M14_AGBL2-3_like Peptidase M14-like domain of ATP/	98.98
cd06242	268	Peptidase_M14-like_1_5 Peptidase M14-like domain o	98.98
cd06906	278	M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervo	98.48
cd06233	283	Peptidase_M14-like_6 Peptidase M14-like domain of	97.49
cd06240	273	Peptidase_M14-like_1_3 Peptidase M14-like domain o	97.43
PF10994	341	DUF2817: Protein of unknown function (DUF2817); In	97.43
cd06254	288	M14_ASTE_ASPA_like_4 A functionally uncharacterize	96.9
cd06251	287	M14_ASTE_ASPA_like_1 A functionally uncharacterize	96.71
cd06250	359	M14_PaAOTO_like An uncharacterized subgroup of the	96.56
cd06230	252	M14_ASTE_ASPA_like The Peptidase M14 Succinylgluta	96.51
cd06255	293	M14_ASTE_ASPA_like_5 A functionally uncharacterize	95.97
cd06252	316	M14_ASTE_ASPA_like_2 A functionally uncharacterize	95.44
cd06232	240	Peptidase_M14-like_5 Peptidase M14-like domain of	95.27
TIGR02994	325	ectoine_eutE ectoine utilization protein EutE. Mem	95.16
PF04952	292	AstE_AspA: Succinylglutamate desuccinylase / Aspar	94.93
cd06253	298	M14_ASTE_ASPA_like_3 A functionally uncharacterize	94.8
cd06909	282	M14_ASPA Aspartoacylase (ASPA) belongs to the Succ	93.15
PRK02259	288	aspartoacylase; Provisional	92.86
COG2866	374	Predicted carboxypeptidase [Amino acid transport a	92.77
cd06910	272	M14_ASTE_ASPA_like_7 A functionally uncharacterize	92.68
cd06256	327	M14_ASTE_ASPA_like_6 A functionally uncharacterize	92.6
KOG3641|consensus	650		92.35
cd03855	322	M14_ASTE Peptidase M14 Succinylglutamate desucciny	90.74
COG3608	331	Predicted deacylase [General function prediction o	87.5
PRK05324	329	succinylglutamate desuccinylase; Provisional	82.67

>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.95  E-value=5.8e-28  Score=191.36  Aligned_cols=93  Identities=31%  Similarity=0.538  Sum_probs=83.3

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCC----CCCCCC-------------C-CCCCCCCCCCCcHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPD----QFDSSS-------------E-RREQPLNVKKLEPETLA   65 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~----~w~~~~-------------~-~~~y~G~~p~SEpEt~A   65 (96)
                      -.|||+++.+.+++++..+|+++|+||+|||||||||+    .|+..+             . ++.|.|+.|+|||||+|
T Consensus       108 ~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~~~~~~~Pc~~~Y~G~~~~sEPET~A  187 (405)
T cd03869         108 SMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVPRKVPNHHIPIPEWYLSENATVAPETRA  187 (405)
T ss_pred             eeCCchhhhhhhcCccccccccCccCCCCccccCCCcccccccccccccccccccccccCCCCccccCCCCCCCcHHHHH
Confidence            36899999999988888899999999999999999996    676321             1 36899999999999999


Q ss_pred             HHHHHHhCCceEEEEeccCCceEEeeCCCCC
Q psy17408         66 MISFIKNNPFVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        66 v~~~~~~~~~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      |++|+++++|+|++++|+|..+++||||+++
T Consensus       188 v~~~i~~~~FvLSanlHgG~lv~~YPyd~~~  218 (405)
T cd03869         188 VIAWMEKIPFVLGANLQGGELVVSYPYDMTR  218 (405)
T ss_pred             HHHHHHhCCceEEEEecCccEEEEcCccccc
Confidence            9999999999999999999999999999863

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro

>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.95  E-value=1.5e-27  Score=182.35  Aligned_cols=89  Identities=18%  Similarity=0.230  Sum_probs=78.5

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      ..|+|+++.+.+++   .+|+++|.     ||+|||||||||.+|+..+.     ++.|+|+.|+|||||+||++|++++
T Consensus       104 ~~NPDG~~~~~~~~---r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~p~SEpEt~av~~~~~~~  180 (300)
T cd06246         104 VMNVDGYDYTWKKN---RMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSETYCGPYPESEPEVKAVASFLRRH  180 (300)
T ss_pred             eecCCceeEEEecc---ceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhC
Confidence            46899999998874   56899985     68999999999999975432     3799999999999999999999987


Q ss_pred             C--ceEEEEeccCCceEEeeCCCC
Q psy17408         74 P--FVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~--~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +  +.++|++||++++|+|||+++
T Consensus       181 ~~~i~~~is~Hs~g~~i~~P~~~~  204 (300)
T cd06246         181 INQIKAYISMHSYSQMILFPYSYT  204 (300)
T ss_pred             CcceeEEEEeccCCcEEEeccccC
Confidence            4  788999999999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil

>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.94  E-value=2.3e-27  Score=181.60  Aligned_cols=89  Identities=18%  Similarity=0.201  Sum_probs=77.7

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCC----C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSS----E-RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~----~-~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      ..|+|+++...+.+   ..|+++|.     ||.|||||||||.+|+..+    . ++.|+|+.|+|||||+||++|+.++
T Consensus       104 ~~NPDG~~~s~~~~---r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pfSEpEt~av~~~~~~~  180 (301)
T cd03870         104 VTNPDGYVFTHSQN---RLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGPYANSEVEVKSIVDFVKSH  180 (301)
T ss_pred             eecCchhhheeccc---ceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCccccCCCCCCccHHHHHHHHHHhhC
Confidence            36899998887654   46898886     7899999999999998543    2 3789999999999999999999987


Q ss_pred             -CceEEEEeccCCceEEeeCCCC
Q psy17408         74 -PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 -~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                       ++.++|++||++++|+|||+++
T Consensus       181 ~~~~~~l~lHS~g~~i~yP~~~~  203 (301)
T cd03870         181 GNFKAFISIHSYSQLLLYPYGYT  203 (301)
T ss_pred             CCeEEEEEeccCCceEEecCcCC
Confidence             6999999999999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p

>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3

Probab=99.94  E-value=5.7e-27  Score=179.55  Aligned_cols=89  Identities=18%  Similarity=0.221  Sum_probs=78.2

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      ..|+|+++...+++   ..|+++|.     ||.|||||||||.+|+..+.     ++.|+|+.|+|||||+||++|+.++
T Consensus       101 ~vNPDGy~ys~~~~---r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~G~~pfSEpEt~al~~~~~~~  177 (300)
T cd03872         101 VFNVDGYHYSWTND---RFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFPESEPEVKAVAQFLRKH  177 (300)
T ss_pred             eecCCcceeeeccc---hhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC
Confidence            46899999998876   46888875     48999999999999976532     3799999999999999999999986


Q ss_pred             --CceEEEEeccCCceEEeeCCCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                        ++.++|++||++++|+|||+++
T Consensus       178 ~~~i~~~ls~Hsyg~~i~~P~g~~  201 (300)
T cd03872         178 RKHVRAYLSFHAYAQMLLYPYSYK  201 (300)
T ss_pred             CccceEEEEEccCCcEEEecCCCc
Confidence              5899999999999999999986

4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse

>KOG2650|consensus

Probab=99.94  E-value=7.9e-27  Score=185.46  Aligned_cols=90  Identities=22%  Similarity=0.188  Sum_probs=78.4

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC--C----CCCcCCCCCCCCCCCC-CCC----C-CCCCCCCCCCcHHHHHHHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN--N----ANGVDLNRNFPDQFDS-SSE----R-REQPLNVKKLEPETLAMISFIK   71 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~--N----~~GVDLNRNFp~~w~~-~~~----~-~~y~G~~p~SEpEt~Av~~~~~   71 (96)
                      .-|||+++-....+   .+|+++|.  .    |.||||||||+++|+. .+.    | +.|+|+.|||||||+||.+||.
T Consensus       220 v~NPDGYeYS~t~~---R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~Gas~~PCse~Y~G~~pfSEpEt~av~~fi~  296 (418)
T KOG2650|consen  220 VVNPDGYEYSRTTD---RLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKGASSDPCSETYAGPSPFSEPETRAVRDFIT  296 (418)
T ss_pred             eecCCcceeeeccc---ccccccCCCCCCCCeeeCCCCCCCccCcCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHH
Confidence            35899999888875   56999995  2    6899999999999987 332    3 7999999999999999999999


Q ss_pred             hC--CceEEEEeccCCceEEeeCCCCC
Q psy17408         72 NN--PFVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        72 ~~--~~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      +.  ++.++|+||||+|+|+|||+|+.
T Consensus       297 ~~~~~i~~yislHSYsQ~llyPyg~~~  323 (418)
T KOG2650|consen  297 SFENNIKAYISLHSYSQLLLYPYGYTN  323 (418)
T ss_pred             hcCcceEEEEEecccceeEEecccccC
Confidence            85  48999999999999999999873

>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3

Probab=99.94  E-value=2.2e-26  Score=176.12  Aligned_cols=90  Identities=22%  Similarity=0.221  Sum_probs=78.0

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      ..|+|+++...+.+   ..|+++|.     +|.||||||||+.+|+..+.     ++.|+|+.|+|||||+||++|+++.
T Consensus       103 ~~NPDGy~ys~~~~---r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~pfSEpEt~ai~~~~~~~  179 (298)
T cd06247         103 VLNIDGYIYTWTTD---RLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNIFCGTGPESEPETKAVARLIESK  179 (298)
T ss_pred             eecCCcceEEeccc---ceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhc
Confidence            36899999987765   56899885     67899999999999986432     3799999999999999999999997


Q ss_pred             C--ceEEEEeccCCceEEeeCCCCC
Q psy17408         74 P--FVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        74 ~--~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      +  ++++|++||+|++|+|||+++.
T Consensus       180 ~~~i~~~l~~Hsyg~~i~~P~g~~~  204 (298)
T cd06247         180 KSDILCYLTIHSYGQLILLPYGYTK  204 (298)
T ss_pred             CcceEEEEEeccCCCeEEeCCcCCC
Confidence            5  6779999999999999999863

4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.

>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3

Probab=99.93  E-value=9.7e-27  Score=183.61  Aligned_cols=93  Identities=44%  Similarity=0.613  Sum_probs=77.1

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCC-------CC--C-CCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSS-------SE--R-REQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~-------~~--~-~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      -.|||+++++.++++...+|..+|.|++|||||||||+.|...       +.  + ..+....+++||||+||++|++++
T Consensus       104 ~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~~~~~~epET~Av~~~~~~~  183 (392)
T cd03864         104 SMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNWKSQVEPETLAVIQWMQNY  183 (392)
T ss_pred             eeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccCCCccccccccCHHHHHHHHHHHhc
Confidence            3689999999998888788899999999999999999875311       11  0 011122578999999999999999


Q ss_pred             CceEEEEeccCCceEEeeCCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      +|+|++++|||+++++||||+++
T Consensus       184 ~fvls~nlHgG~~v~~YPyd~~~  206 (392)
T cd03864         184 NFVLSANLHGGAVVANYPYDKSR  206 (392)
T ss_pred             CcEEEEEccCCceeeeCCccccc
Confidence            99999999999999999999874

4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu

>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=2.6e-26  Score=173.78  Aligned_cols=86  Identities=22%  Similarity=0.264  Sum_probs=77.6

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCC---CCCCCCCCCCCcHHHHHHHHHHHhCCceEEEE
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSE---RREQPLNVKKLEPETLAMISFIKNNPFVLSGN   80 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~---~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is   80 (96)
                      ..|||+++....++      +.+|.|++|||||||||..|+..+.   ++.|+|+.|+|||||+||++|+++.+++++|+
T Consensus       107 ~~NPDG~~~~~~~~------~~wR~N~~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt~av~~~~~~~~~~~~i~  180 (272)
T cd06227         107 NENPDGRKKVESGN------YCLRENENGVDLNRNYGADWGFKEDDYEDEEYSGPAPFSEPETRVLRDLLTSFSPDVFLS  180 (272)
T ss_pred             ccCCchheeEeccC------cccccCCccccccccCCcccccCCCCccccccCCCCCCCcHHHHHHHHHHHhCCCeEEEE
Confidence            35899999987765      5678899999999999999986543   47999999999999999999999999999999


Q ss_pred             eccCCceEEeeCCCC
Q psy17408         81 LHGGAIVASYPFDDS   95 (96)
Q Consensus        81 ~Hsg~~~i~yPy~~s   95 (96)
                      +||++++++|||+++
T Consensus       181 ~Hs~~~~i~~P~~~~  195 (272)
T cd06227         181 VHSGTLALFTPYAYK  195 (272)
T ss_pred             eccCCCEEEecCCCC
Confidence            999999999999986

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=3.3e-26  Score=175.23  Aligned_cols=89  Identities=20%  Similarity=0.226  Sum_probs=76.2

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      ..|+|+++.+.+.+   ..|+++|.     +|.|||||||||..|+..+.     .+.|+|+.|+|||||+||++|+++.
T Consensus       104 ~~NPDG~~~s~~~~---r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~SEpEt~Al~~~~~~~  180 (300)
T cd03871         104 VLNIDGYIYTWTKN---RMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPESEKETKALADFIRNN  180 (300)
T ss_pred             eecCCcCeeeeccC---HHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhc
Confidence            35899999988865   45888775     25899999999999975432     2789999999999999999999986


Q ss_pred             --CceEEEEeccCCceEEeeCCCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                        .+.++|++||++++|+|||+++
T Consensus       181 ~~~~~~~l~~HSyg~~i~~Py~~~  204 (300)
T cd03871         181 LSSIKAYLTIHSYSQMLLYPYSYT  204 (300)
T ss_pred             CcceeEEEEeccCccEEEecCcCC
Confidence              4788999999999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.

>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=2.8e-26  Score=177.98  Aligned_cols=89  Identities=20%  Similarity=0.153  Sum_probs=77.7

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC--------CCCCcCCCCCCCCCCCCC----------C----C-CCCCCCCCCCCc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN--------NANGVDLNRNFPDQFDSS----------S----E-RREQPLNVKKLE   60 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~--------N~~GVDLNRNFp~~w~~~----------~----~-~~~y~G~~p~SE   60 (96)
                      ..|+|+++...+.+   ..|+++|.        +|.||||||||+.+|+..          +    . ++.|+|+.||||
T Consensus        90 ~vNPDGy~~s~~~~---r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~S~~Pcse~Y~G~~pfSE  166 (332)
T cd06228          90 LVNPDGRAHDQTAN---SCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVASTDPASETFHGTAAFSE  166 (332)
T ss_pred             eecCcchhheeccc---hhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCCCCCCCccccCCCCCCcc
Confidence            46899999987754   56899886        789999999999999731          1    1 379999999999


Q ss_pred             HHHHHHHHHHHhCC-ceEEEEeccCCceEEeeCCCC
Q psy17408         61 PETLAMISFIKNNP-FVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        61 pEt~Av~~~~~~~~-~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      |||+||++++++.+ +.++|++||++++|+|||+++
T Consensus       167 PET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~  202 (332)
T cd06228         167 PETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDD  202 (332)
T ss_pred             HHHHHHHHHHhccCCeEEEEEeccCCceEEecccCC
Confidence            99999999999986 999999999999999999986

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=3.2e-26  Score=180.38  Aligned_cols=91  Identities=36%  Similarity=0.561  Sum_probs=75.6

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCC-------CCCCCCCCC------CCCCcHHHHHHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSS-------SERREQPLN------VKKLEPETLAMISFI   70 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~-------~~~~~y~G~------~p~SEpEt~Av~~~~   70 (96)
                      -.|+|+++.+.+.++...+|+++|.||+|||||||||+.|...       +.+ ...+|      .+.|||||+||++|+
T Consensus       104 ~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~-~~~~p~p~~~~~~~sepEt~Av~~~~  182 (395)
T cd03867         104 SMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGAR-TDHIPIPDSYWFGKVAPETKAVMKWM  182 (395)
T ss_pred             ccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhccccc-ccCCCCccccccCccCHHHHHHHHHH
Confidence            3589999999887765567999999999999999999998641       111 11111      346999999999999


Q ss_pred             HhCCceEEEEeccCCceEEeeCCCC
Q psy17408         71 KNNPFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        71 ~~~~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++|+++++||||+++++||||++
T Consensus       183 ~~~~~~l~~s~Hs~~~~~~yP~~~t  207 (395)
T cd03867         183 RSIPFVLSASLHGGDLVVSYPYDFS  207 (395)
T ss_pred             hhCCceEEEEccCcceeEEcccccc
Confidence            9999999999999999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.

>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E

Probab=99.93  E-value=4.7e-26  Score=174.16  Aligned_cols=89  Identities=20%  Similarity=0.225  Sum_probs=77.3

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      -.|+|+++...+.+   ..|+++|.     +|.|||||||||..|+..+.     ++.|+|+.|+|||||+||++|+.++
T Consensus       105 ~~NPDG~~~~~~~~---~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~sEpEt~av~~~~~~~  181 (304)
T cd06248         105 VVNPDGFVYTQTSD---RLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSETYRGESPGDAPEAKALAAFLNKL  181 (304)
T ss_pred             eecCchhhhhccch---hhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhc
Confidence            46899998877755   45888884     57999999999999985431     3789999999999999999999986


Q ss_pred             ----CceEEEEeccCCceEEeeCCCC
Q psy17408         74 ----PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ----~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                          +|+++|++||++++|+|||+++
T Consensus       182 ~~~~~~~~~l~~Hs~~~~i~~P~~~~  207 (304)
T cd06248         182 AEGQGIVGYIDWHSYSQLILYPYGYS  207 (304)
T ss_pred             cccCceEEEEEeccCcceEEecCcCC
Confidence                5999999999999999999986

Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,

>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins

Probab=99.93  E-value=1.1e-25  Score=171.99  Aligned_cols=88  Identities=22%  Similarity=0.269  Sum_probs=74.6

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC---------CCCCcCCCCCCCCCCCCCC-----C-CCCCCCCCCCCcHHHHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN---------NANGVDLNRNFPDQFDSSS-----E-RREQPLNVKKLEPETLAMIS   68 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~---------N~~GVDLNRNFp~~w~~~~-----~-~~~y~G~~p~SEpEt~Av~~   68 (96)
                      ..|+|+++...++    ..|+++|.         |+.|||||||||..|+..+     . .+.|+|+.|+|||||+||++
T Consensus        93 ~~NPDG~~~~~~~----~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~p~SEpEt~Av~~  168 (293)
T cd06226          93 IVNPDGRKIAEQG----LSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETYRGPAPGSEPETAALED  168 (293)
T ss_pred             cccCCcceeeccC----cceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCcCCCCCCCcHHHHHHHH
Confidence            3689999988764    34677763         4589999999999997542     1 37899999999999999999


Q ss_pred             HHHhCC----------------ceEEEEeccCCceEEeeCCCC
Q psy17408         69 FIKNNP----------------FVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        69 ~~~~~~----------------~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      |+.++.                |.++|++||++++|+|||+++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~  211 (293)
T cd06226         169 YIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWT  211 (293)
T ss_pred             HHHhccccccccccccccccccceEEEEeccCCCeEeecCcCC
Confidence            999975                889999999999999999975

This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.

>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.92  E-value=1.1e-25  Score=175.59  Aligned_cols=85  Identities=54%  Similarity=0.917  Sum_probs=77.1

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      ..|+|+++...+++| ...|+++|.||+|||||||||++|+....      +.|+|||||+||++|+++++|++++++|+
T Consensus       103 ~~NPDG~~~~~~~~~-~~~~~~~R~n~~GvDLNRnf~~~~~~~~~------~~~~sepEt~av~~~~~~~~~~l~~~lH~  175 (372)
T cd03868         103 SMNPDGFERSQEGDC-SCGGYGGRENANNVDLNRNFPDQFEGKLQ------RLSERQPETVAMMKWIRSNPFVLSGNLHG  175 (372)
T ss_pred             eeCCchHHhhcccCc-cccCCCccCCCCCccCCCCCCcccCCcCC------CCCCCCHHHHHHHHHHhhCCcEEEEEccC
Confidence            468999999999887 45689999999999999999999986432      68899999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      |+++++||||++
T Consensus       176 ~~~~~~yP~~~~  187 (372)
T cd03868         176 GSVVASYPYDDS  187 (372)
T ss_pred             ccEEEecccccc
Confidence            999999999975

4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p

>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.92  E-value=2.9e-25  Score=168.72  Aligned_cols=91  Identities=20%  Similarity=0.191  Sum_probs=78.7

Q ss_pred             ccCCCCceeeecCCccCCCccCCC-------CCCCCcCCCCCCCCCCCCC--C----C-CCCCCCCCCCCcHHHHHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGR-------NNANGVDLNRNFPDQFDSS--S----E-RREQPLNVKKLEPETLAMISF   69 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R-------~N~~GVDLNRNFp~~w~~~--~----~-~~~y~G~~p~SEpEt~Av~~~   69 (96)
                      ..|+|+++...++ .....|+++|       .|+.|||||||||.+|+..  +    . .+.|+|+.|+|||||+||++|
T Consensus       105 ~~NPDG~~~~~~~-~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y~G~~p~sepEt~av~~~  183 (295)
T cd03859         105 VVNPDGYEYDETT-GGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSNDPSSETYRGPSAFSEPETQAIRDF  183 (295)
T ss_pred             eeCCCcceEEeec-cCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCCCCCCCccCCCCCchHHHHHHHHH
Confidence            3689999999885 2345688776       4789999999999999863  2    1 379999999999999999999


Q ss_pred             HHhC-CceEEEEeccCCceEEeeCCCC
Q psy17408         70 IKNN-PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        70 ~~~~-~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +.+. +|+++|++||++++|+|||+++
T Consensus       184 ~~~~~~~~~~l~~Hs~g~~i~~P~~~~  210 (295)
T cd03859         184 VESHKNIKTALNYHTYSNLWLYPYGYQ  210 (295)
T ss_pred             HHhCCCeEEEEEeecCCceEEeCCcCC
Confidence            9999 8999999999999999999975

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.

>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.92  E-value=1.5e-25  Score=176.02  Aligned_cols=80  Identities=51%  Similarity=0.800  Sum_probs=72.5

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      -.|||+++.+.++++.   |+++|.|++|||||||||++|...         ...+||||+||++|+++++|+++++|||
T Consensus       108 ~~NPDG~e~~~~~~~~---~~~~R~n~~GVDLNRNfp~~~~~~---------~~~~EpEt~Av~~~~~~~~f~l~~~lHs  175 (375)
T cd03863         108 SMNPDGYEKSQEGDRG---GTVGRNNSNNYDLNRNFPDQFFQV---------TDPPQPETLAVMSWLKSYPFVLSANLHG  175 (375)
T ss_pred             ccCCchHHheecCCcc---cccccccCCCcccccCCccccccC---------CCCCcHHHHHHHHHHhhCCceEEEEecC
Confidence            3689999999998864   799999999999999999999742         3457999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      |+++++||||++
T Consensus       176 g~~~~~yPy~~~  187 (375)
T cd03863         176 GSLVVNYPFDDD  187 (375)
T ss_pred             CCEEEEccCcCC
Confidence            999999999975

4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac

>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.91  E-value=5.7e-25  Score=172.02  Aligned_cols=80  Identities=33%  Similarity=0.509  Sum_probs=72.0

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      -.|||+++.+.+++|..   ..+|.||+|||||||||+.|         .|+.|+|||||+||++|+++.+|+++++|||
T Consensus       104 ~~NPDG~e~~~~~~~~~---~~~r~na~GvDLNRNf~~~~---------~g~~~~sepEt~Av~~~~~~~~f~l~~~lH~  171 (363)
T cd06245         104 SLNPDGREKAQEKQCTS---KEGHTNAHGKDLDTDFTSNA---------SNMSADVQPETKAIIDNLISKDFTLSVALDG  171 (363)
T ss_pred             ccCCchHHHeecCCCcc---cCCCCCcccccCCCCCCccc---------CCCCCCCcHHHHHHHHHHHhCCceEEEEEcC
Confidence            35899999999988653   46789999999999999754         4678999999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      |+++++||||++
T Consensus       172 ~~~~~~yPy~~~  183 (363)
T cd06245         172 GSVVATYPYDKP  183 (363)
T ss_pred             CcEEEEecCCCC
Confidence            999999999986

4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a

>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3

Probab=99.91  E-value=4.5e-25  Score=174.79  Aligned_cols=93  Identities=41%  Similarity=0.608  Sum_probs=75.5

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCC------CC-C----CCCCCCC---CCCCcHHHHHHHHH
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDS------SS-E----RREQPLN---VKKLEPETLAMISF   69 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~------~~-~----~~~y~G~---~p~SEpEt~Av~~~   69 (96)
                      -.|||+++.+.++.++...|+++|.|++|||||||||+++..      .+ .    ...+.++   ....||||+|||+|
T Consensus       108 ~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pEt~Avm~w  187 (402)
T cd03865         108 SLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAVIHW  187 (402)
T ss_pred             eeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCccccccccccccccccCCChHHHHHHHH
Confidence            468999999988777777899999999999999999986321      11 1    1122222   23689999999999


Q ss_pred             HHhCCceEEEEeccCCceEEeeCCCCC
Q psy17408         70 IKNNPFVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        70 ~~~~~~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      +++.+|+|+++||+|+.|++||||.++
T Consensus       188 ~~~~~FvlsanlHgG~lva~YP~D~~~  214 (402)
T cd03865         188 IMDIPFVLSANLHGGDLVANYPYDETR  214 (402)
T ss_pred             HHhCCcEEEEEccCccEEEECCCCCCC
Confidence            999999999999999999999999763

4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe

>smart00631 Zn_pept Zn_pept

Probab=99.91  E-value=3.9e-24  Score=160.71  Aligned_cols=89  Identities=30%  Similarity=0.381  Sum_probs=80.0

Q ss_pred             ccCCCCceeeecCCccCCCccCCCC---CCCCcCCCCCCCCCCCCCCC--CCCCCCCCCCCcHHHHHHHHHHHhC-CceE
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRN---NANGVDLNRNFPDQFDSSSE--RREQPLNVKKLEPETLAMISFIKNN-PFVL   77 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~---N~~GVDLNRNFp~~w~~~~~--~~~y~G~~p~SEpEt~Av~~~~~~~-~~~l   77 (96)
                      -.|+|+++...+++   ..|+++|.   |++|||||||||..|+....  .+.|+|+.|+|||||+||++++.+. ++.+
T Consensus       100 ~~NPDG~~~~~~~~---~~wr~~r~~~~~~~GvDLNRnf~~~w~~~~~p~~~~y~G~~~~sepEt~ai~~~~~~~~~~~~  176 (277)
T smart00631      100 VLNPDGYEYTHTGD---RLWRKNRSPNSNCRGVDLNRNFPFHWGKTGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFVL  176 (277)
T ss_pred             eecCchhhheeccc---ccccCCCCCCCCCcCcccCCCCCCCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCCeeE
Confidence            46899999888776   35899998   99999999999999987433  4799999999999999999999999 8999


Q ss_pred             EEEeccCCceEEeeCCCC
Q psy17408         78 SGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        78 ~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++|+++++++|||+++
T Consensus       177 ~id~Hs~~~~i~~p~~~~  194 (277)
T smart00631      177 YIDLHSYSQLILYPYGYT  194 (277)
T ss_pred             EEEeccCCcEEEecCcCC
Confidence            999999999999999875

>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.91  E-value=1.9e-24  Score=168.32  Aligned_cols=85  Identities=51%  Similarity=0.795  Sum_probs=77.9

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      -.|+|+++...++++   .|+++|.|++|||||||||..|...+.    +|+.|+|||||+||++|+++++|++++++|+
T Consensus       104 ~~NPDG~~~~~~~~~---~w~~~R~n~~GvDLNRnf~~~~~~~~~----~G~~~~sepEt~al~~~~~~~~~~~~i~~Hs  176 (374)
T cd03858         104 SMNPDGYEKAAEGDC---GGLTGRYNANGVDLNRNFPDLFFTNYR----SSDNGPRQPETKAVMNWIKSIPFVLSANLHG  176 (374)
T ss_pred             ccCCchhhhhcccCC---cccccCCCCcceecccCCCcccccccc----cCCCcccCHHHHHHHHHHhhCCceEEEEccC
Confidence            368999999888874   589999999999999999999986544    6999999999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      ++++++|||+++
T Consensus       177 ~~~~~~yp~~~~  188 (374)
T cd03858         177 GALVANYPYDDS  188 (374)
T ss_pred             CceEEEcccccC
Confidence            999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr

>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3

Probab=99.91  E-value=3.6e-24  Score=159.74  Aligned_cols=91  Identities=24%  Similarity=0.301  Sum_probs=75.0

Q ss_pred             ccCCCCceeeecCCccC-------CCccC-------CCCCCCCcCCCCCCCCCCCCCC-----C-CCCCCCCCCCCcHHH
Q psy17408          4 YCDCKSNWLPYEGSCNS-------LARFV-------GRNNANGVDLNRNFPDQFDSSS-----E-RREQPLNVKKLEPET   63 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~-------~~w~~-------~R~N~~GVDLNRNFp~~w~~~~-----~-~~~y~G~~p~SEpEt   63 (96)
                      -.|+|+++...++....       ..|++       +|.||+|||||||||..|...+     . +..|+|+.|+|||||
T Consensus        72 ~~NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEt  151 (255)
T cd06229          72 MVNPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPET  151 (255)
T ss_pred             CccCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhH
Confidence            46899999887753221       12222       3678999999999999997542     1 379999999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408         64 LAMISFIKNNPFVLSGNLHGGAIVASYPFDD   94 (96)
Q Consensus        64 ~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~   94 (96)
                      +||++|++++++.++|++|+++++|+|||+.
T Consensus       152 ral~~~~~~~~~~~~i~~Hs~g~~i~~~~~~  182 (255)
T cd06229         152 IALAELTRENRFRAVLAYHSQGEEIYWGYGG  182 (255)
T ss_pred             HHHHHHHHhCCCeEEEEecCCCCeEEecCCC
Confidence            9999999999999999999999999999975

4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.

>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily

Probab=99.90  E-value=6.8e-24  Score=160.86  Aligned_cols=89  Identities=21%  Similarity=0.181  Sum_probs=76.7

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCC-----CCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNN-----ANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N-----~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      -.|+|+++...+++   ..|+++|.+     ++|||||||||..|...+.     .+.|+|+.|+|||||+||++++++.
T Consensus        98 ~~NPDG~~~~~~~~---~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G~~~~sepEt~al~~~~~~~  174 (294)
T cd03860          98 VANPDGYEYTHTTD---RLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAGPSAFSEPETRAVRDFLLSL  174 (294)
T ss_pred             eecCCchhhhcccc---chhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhc
Confidence            35889998876654   458888864     7899999999999986422     3789999999999999999999998


Q ss_pred             --CceEEEEeccCCceEEeeCCCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                        +|+++|++|+++++|+|||+++
T Consensus       175 ~~~~~~~ld~Hs~~~~i~~P~~~~  198 (294)
T cd03860         175 RGRIKAYLSLHSYGQLILYPWGYT  198 (294)
T ss_pred             cccEEEEEEeccCCceEEcCCCCC
Confidence              7999999999999999999874

CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the

>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.90  E-value=4.8e-24  Score=167.35  Aligned_cols=79  Identities=47%  Similarity=0.769  Sum_probs=69.9

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      -.|||+++... .+|   .|+++|.|++|||||||||+.|...         ...|||||+||++|+++.+|+++++||+
T Consensus       107 ~~NPDG~e~~~-~~~---~~~~~R~N~~GvDLNRnf~~~w~~~---------~~~sepEt~al~~~~~~~~~~l~~~~H~  173 (376)
T cd03866         107 SMNPDGFEASK-PDC---YYSVGRYNKNGYDLNRNFPDAFEEN---------NEQRQPETRAVMEWLKSETFVLSANLHG  173 (376)
T ss_pred             ccCCchhhhcc-ccc---ccccccccCCCcccCcCchhhhccC---------CCCCcHHHHHHHHHHHhcCcEEEEEccC
Confidence            46899999983 443   4799999999999999999999853         2349999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      |+++++||||++
T Consensus       174 ~~~~~~YP~~~~  185 (376)
T cd03866         174 GALVASYPYDNG  185 (376)
T ss_pred             CceEEeccccCC
Confidence            999999999985

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont

>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.90  E-value=1.6e-23  Score=163.99  Aligned_cols=64  Identities=27%  Similarity=0.357  Sum_probs=59.0

Q ss_pred             CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-CceEEEEeccCCceEEeeCCCC
Q psy17408         31 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        31 ~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~-~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      .|||||||||..|.+.+ .++|+|+.|+|||||+||++|+.++ ++.++|++||+|++|+|||+++
T Consensus       208 ~GvDlNRNf~~~W~~~~-~~~y~G~~p~SEpEt~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~~  272 (360)
T cd06905         208 EGLDFNRNFPHDWRPEG-EQYGAGPFPFSEPETRAVVEFWTDHPNINGFISYHTYSGVILRPYSDK  272 (360)
T ss_pred             cCCCcccCcCCCCCCCC-CcCCCCCCCCChHHHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCCC
Confidence            59999999999998653 4689999999999999999999987 5899999999999999999986

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification

Probab=99.86  E-value=1.5e-22  Score=150.82  Aligned_cols=88  Identities=30%  Similarity=0.325  Sum_probs=72.1

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCC-----CCCCCCCCCCCCcHHHHHHHHHHHhCCceEEE
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSS-----ERREQPLNVKKLEPETLAMISFIKNNPFVLSG   79 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~-----~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~i   79 (96)
                      -|+|++++....+   ..|+++|.|++|||||||||..|+..+     ....|+|+.|+|||||+||++++++.++++++
T Consensus        97 ~NPDG~~~~~~~~---~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepEt~al~~~~~~~~~~~~i  173 (279)
T PF00246_consen   97 VNPDGYEYGTSGD---RGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPETRALRNLIQDWNPDFFI  173 (279)
T ss_dssp             SSHHHHHHHHHT----TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHHHHHHHHHHHHTTEEEEE
T ss_pred             ecccceeeeeecc---cccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhHHHHHHHHHhhcceeEEE
Confidence            3667777776644   458999999999999999999996542     13789999999999999999999999999999


Q ss_pred             EeccCCceEEeeCCCC
Q psy17408         80 NLHGGAIVASYPFDDS   95 (96)
Q Consensus        80 s~Hsg~~~i~yPy~~s   95 (96)
                      ++|++++.++|||+++
T Consensus       174 d~H~~~~~~~~p~~~~  189 (279)
T PF00246_consen  174 DFHSGGNAILYPYGYS  189 (279)
T ss_dssp             EEEESSSEEEESESSS
T ss_pred             eccccccceeeecccc
Confidence            9999999999999864

; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....

>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.86  E-value=1.1e-21  Score=148.88  Aligned_cols=75  Identities=25%  Similarity=0.326  Sum_probs=64.6

Q ss_pred             CCccCCCCCCCCcCCCCCCCCCCCC--------CC--C-CCCCCCCC-CCCcHHHHHHHHHHHhC----CceEEEEeccC
Q psy17408         21 LARFVGRNNANGVDLNRNFPDQFDS--------SS--E-RREQPLNV-KKLEPETLAMISFIKNN----PFVLSGNLHGG   84 (96)
Q Consensus        21 ~~w~~~R~N~~GVDLNRNFp~~w~~--------~~--~-~~~y~G~~-p~SEpEt~Av~~~~~~~----~~~l~is~Hsg   84 (96)
                      |.|+++|.|++|||||||||..|..        ..  . ...|.|+. |+|||||+||++++++.    +++++|++|||
T Consensus        80 G~~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~ld~HSg  159 (273)
T cd03862          80 GMALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIALDCHSG  159 (273)
T ss_pred             HHHhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEEEEECCC
Confidence            4689999999999999999998752        11  1 26899986 99999999999999985    69999999996


Q ss_pred             ---CceEEeeCCCC
Q psy17408         85 ---AIVASYPFDDS   95 (96)
Q Consensus        85 ---~~~i~yPy~~s   95 (96)
                         +++|+|||+++
T Consensus       160 ~G~~~~i~~Pyg~~  173 (273)
T cd03862         160 FGLVDRIWFPYAYT  173 (273)
T ss_pred             CCccCEEEcCCcCC
Confidence               48999999986

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>KOG2649|consensus

Probab=99.84  E-value=1.9e-21  Score=156.20  Aligned_cols=89  Identities=46%  Similarity=0.737  Sum_probs=75.5

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCC---------CC-CCCCCCCCCCcHHHHHHHHHHHhCC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSS---------ER-REQPLNVKKLEPETLAMISFIKNNP   74 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~---------~~-~~y~G~~p~SEpEt~Av~~~~~~~~   74 (96)
                      -++|++|+|.++++.   |..+|+|++|||||||||++.+.-.         .+ ..+.-+....+|||+||++|+++.+
T Consensus       172 mNPDGyE~a~~~~~~---~~~GR~Nang~DLNrnFPd~~~~~~~~~~~~~~n~~l~~~~~~~~~~~pEt~Avm~W~~~~p  248 (500)
T KOG2649|consen  172 MNPDGYEIAKRGDRG---WATGRNNANGVDLNRNFPDQFRLVYFIVTFDLLNSHLIMFNDDLNLRQPETIAVMKWLRDIP  248 (500)
T ss_pred             cCcchhhhhhccccc---ceecccCccccchhccCcccccceeeeeeecccccccccccccccccCccHHHHHHHHhhcc
Confidence            479999999997754   7999999999999999999854321         01 1255567789999999999999999


Q ss_pred             ceEEEEeccCCceEEeeCCCCC
Q psy17408         75 FVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        75 ~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                      |+|+++||+|..+++||||.++
T Consensus       249 FvLSAnLHGG~lvanYPfD~~~  270 (500)
T KOG2649|consen  249 FVLSANLHGGALVANYPFDDTE  270 (500)
T ss_pred             eeeeccccCCceEEEccccCCc
Confidence            9999999999999999999763

>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins

Probab=99.74  E-value=4.7e-18  Score=121.18  Aligned_cols=68  Identities=32%  Similarity=0.299  Sum_probs=60.5

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCC--CCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSE--RREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPF   92 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~--~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy   92 (96)
                      ++|.|++|||||||||..|.....  +..|+|+.++|||||++|++++++.++.++|++|++...+.++.
T Consensus        49 ~~R~n~~gvDLNRnFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~  118 (178)
T cd06904          49 ATRCNANGVDLNRNFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDG  118 (178)
T ss_pred             CcccCCCCcChhhcCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCC
Confidence            678899999999999999976543  36899999999999999999999999999999999998887653

MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.

>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity

Probab=99.67  E-value=1.4e-16  Score=113.08  Aligned_cols=61  Identities=43%  Similarity=0.617  Sum_probs=56.2

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      .+|.|.+|||||||||..|..          .+++|||+++|++++++.++++++++|++++.++|||+++
T Consensus        56 ~~R~n~~g~DlNR~f~~~~~~----------~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~  116 (196)
T cd00596          56 NWRKNANGVDLNRNFPGLWGK----------GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHS  116 (196)
T ss_pred             eEEeCCCCcCccCCCCCcccC----------CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCC
Confidence            578899999999999987763          4789999999999999999999999999999999999875

Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring

>PRK10602 murein peptide amidase A; Provisional

Probab=99.67  E-value=8.4e-17  Score=120.20  Aligned_cols=61  Identities=34%  Similarity=0.395  Sum_probs=51.9

Q ss_pred             cCCCCCCCCcCCCCCCCC-CCCCCC---------CC---CCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408         24 FVGRNNANGVDLNRNFPD-QFDSSS---------ER---REQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~-~w~~~~---------~~---~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      ..+|.||+|||||||||. .|...+         .+   ..|+|+.|+|||||+|+++|+.++.+..++++|+.
T Consensus        86 ~~~R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~~~~~~~~s~HsP  159 (237)
T PRK10602         86 LGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRLQPAWVVSFHDP  159 (237)
T ss_pred             cccccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHHcCCCEEEEeecc
Confidence            346889999999999997 675321         22   47999999999999999999999988999999993

>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins

Probab=99.64  E-value=4.4e-16  Score=116.41  Aligned_cols=63  Identities=27%  Similarity=0.337  Sum_probs=53.6

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-----CceEEE
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-----PFVLSG   79 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~-----~~~l~i   79 (96)
                      .|||++++.           .+|.|++||||||||+                ++|||||+||++++++.     ++.++|
T Consensus       100 ~NPDG~~~~-----------~wR~N~~GvDLNRnw~----------------~~sepEt~a~~~~~~~~~~~~~~~~~~i  152 (244)
T cd06237         100 MNPDGVDLG-----------HWRHNANGIDLNRDWS----------------NFNQPETRAIRDYLVRLVKEGGKIVFAL  152 (244)
T ss_pred             eCcchhhcC-----------CccCCCCCcCCCCCCC----------------CCCCHHHHHHHHHHHHHhccCCCEEEEE
Confidence            467776641           3588999999999985                57999999999999863     799999


Q ss_pred             EeccCCceEEeeCCC
Q psy17408         80 NLHGGAIVASYPFDD   94 (96)
Q Consensus        80 s~Hsg~~~i~yPy~~   94 (96)
                      ++|++++.++|||++
T Consensus       153 d~Hs~~~~i~~~~~~  167 (244)
T cd06237         153 DFHSTWHDVFYTMPE  167 (244)
T ss_pred             EeccCCcceEecCCC
Confidence            999999999999864

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins

Probab=99.58  E-value=3e-15  Score=113.12  Aligned_cols=58  Identities=19%  Similarity=0.229  Sum_probs=52.3

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CceEEEEeccCCceE-EeeCCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVA-SYPFDDS   95 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~------~~~l~is~Hsg~~~i-~yPy~~s   95 (96)
                      ..|.|+.||||||||+             ++.|++||||+||++++++.      +++++|++|++++++ +|||+++
T Consensus       101 n~R~~~~G~DLNR~w~-------------~p~~~~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~  165 (261)
T cd06908         101 NYRCSLMGHDLNRHWH-------------DPSPWAHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYGNT  165 (261)
T ss_pred             CCcCcCcCcCCCCCCC-------------CCCcccChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeecccc
Confidence            4689999999999996             36789999999999999874      699999999999999 8999975

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins

Probab=99.58  E-value=2.1e-15  Score=114.07  Aligned_cols=54  Identities=24%  Similarity=0.374  Sum_probs=48.5

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD   94 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~   94 (96)
                      .+|.||+||||||||+             ++.++|||||++|+++|++.+++++|++|+++++   ||.+
T Consensus       114 ~~R~n~~GvDLNRnw~-------------~p~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f  167 (263)
T cd06234         114 HLRTNAAGANLNREWA-------------EPSAERSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNF  167 (263)
T ss_pred             CCccCCCCCCCCCCCC-------------CCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccE
Confidence            3588999999999996             3578999999999999999999999999999997   6664

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.45  E-value=1.3e-13  Score=104.37  Aligned_cols=55  Identities=25%  Similarity=0.336  Sum_probs=48.8

Q ss_pred             CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-----CceEEEEeccCC---ceEEeeCC
Q psy17408         26 GRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGA---IVASYPFD   93 (96)
Q Consensus        26 ~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~-----~~~l~is~Hsg~---~~i~yPy~   93 (96)
                      +|.|+.||||||||+             ++.+++||||++|.+++.+.     ++++++++|+++   ++++|-+.
T Consensus       112 ~R~n~~G~DLNR~~~-------------~p~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~yG~~  174 (269)
T cd03856         112 YRCSLSGVDLNRQWQ-------------NPSPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFMYGCS  174 (269)
T ss_pred             CcCCCCCCCcCCCCC-------------CCCCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCCccCceEeecCC
Confidence            588999999999996             46899999999999999986     799999999999   77875544

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M

>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.40  E-value=5.7e-13  Score=101.17  Aligned_cols=54  Identities=20%  Similarity=0.145  Sum_probs=48.8

Q ss_pred             CccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCC---ceEEee
Q psy17408         22 ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA---IVASYP   91 (96)
Q Consensus        22 ~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~---~~i~yP   91 (96)
                      .|-.+|.||.||||||||.                ++|||||++|++++.+.++++++++|+++   .++++|
T Consensus       130 ~wp~~R~n~~g~DLNRD~~----------------~~s~pEtra~~~~~~~~~p~~~~D~H~~g~~~~~~~~P  186 (271)
T cd06238         130 PWPGGRTNHYWFDLNRDWL----------------PLTQPESRGRLAAYHEWRPNVVVDFHEMGTNSTYFFAP  186 (271)
T ss_pred             CCccccccccCcccccccc----------------cccCHHHHHHHHHHHhcCCeEEEEeccCCCccceEEeC
Confidence            5667899999999999995                57999999999999999999999999987   677878

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.35  E-value=1.5e-12  Score=97.84  Aligned_cols=58  Identities=33%  Similarity=0.424  Sum_probs=49.5

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC----CceEEEEeccCCceE-EeeCCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAIVA-SYPFDDS   95 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~----~~~l~is~Hsg~~~i-~yPy~~s   95 (96)
                      ..|.|++||||||||..             +.+++|||++++.+++++.    ++++++++|+++... .|+|+..
T Consensus       103 ~~R~n~~GvDLNR~w~~-------------p~~~~~PE~~~~~~~i~~~~~~~~~~~~iDlH~~s~~~~~F~yg~~  165 (258)
T cd06235         103 NYRCSLSGIDLNRQWKN-------------PDKKLHPEIYHVKQLIKKLSQERNIALFIDLHGHSRKKNSFMYGCS  165 (258)
T ss_pred             CCcCCCCCCCcCCCCCC-------------CCcccCcHHHHHHHHHHHHhccCCceEEEecccccccCCeeeecCC
Confidence            46999999999999974             4579999999999999986    899999999999763 4677653

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc

>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.32  E-value=2.3e-12  Score=95.98  Aligned_cols=51  Identities=33%  Similarity=0.397  Sum_probs=45.5

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFD   93 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~   93 (96)
                      .+|.|++||||||||+.                .+|||++++++++.+.++.++++||+++.+  |..+
T Consensus        91 ~~R~N~~GvDLNRdf~~----------------~s~PEtr~l~~~~~~~~pd~~iDlH~~~~~--y~~~  141 (231)
T cd06239          91 YTRVNANGVDLNRDAQD----------------LSQPESRLLRDVYDGFQPDFCFNLHDQRTI--YGVE  141 (231)
T ss_pred             cccCCCcCCcCCCCCCC----------------CChHHHHHHHHHHHhcCCEEEEEECCCCCc--cCCC
Confidence            57899999999999973                589999999999999999999999999997  5443

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.29  E-value=6.4e-12  Score=95.61  Aligned_cols=51  Identities=35%  Similarity=0.358  Sum_probs=44.7

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCC-ceEEee
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA-IVASYP   91 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~-~~i~yP   91 (96)
                      .+|.|++||||||||..                .++|||++|++++.+.++++++++|++. ..+..|
T Consensus       126 ~~R~Na~G~DLNRD~~~----------------~sqpEt~av~~~~~~w~P~~~~dlHg~~~~~~~~P  177 (268)
T cd06244         126 GTRENANGFDLNRDNSF----------------QTQPETQAIVALIAEWNPASFLDLHGYVEGFLIEP  177 (268)
T ss_pred             eeecCCCccccCCCCCc----------------ccCHHHHHHHHHHHHhCCeEEEEeCCCCCceEEcC
Confidence            47999999999999953                5999999999999999999999999988 444446

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.20  E-value=2.7e-11  Score=90.41  Aligned_cols=45  Identities=27%  Similarity=0.293  Sum_probs=41.4

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      +.+|.|+.||||||||+.                ++||||++|++++.+.++.+++++|++
T Consensus        86 ~~~R~n~~g~DlNRd~~~----------------~~~pEt~al~~~~~~~~p~~~iDlHe~  130 (236)
T cd06243          86 ADTRSNADGIDINRDHLL----------------LNTPEAQALASVLRDYRPDVVVDAHEY  130 (236)
T ss_pred             cCCcCCCCCcccCCCCCC----------------CCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence            357999999999999963                689999999999999999999999999

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.15  E-value=3.8e-11  Score=90.78  Aligned_cols=55  Identities=25%  Similarity=0.248  Sum_probs=47.8

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCCC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ..+|.|++||||||||+.                .++|||+|+++++.+.++.++|++|+.+.. .|+|+.+
T Consensus       117 ~~~R~na~g~DLNRdf~~----------------~~~pEtra~~~~~~~~~p~~~iD~H~~~g~-~~~yd~t  171 (266)
T cd06241         117 YGWRGNARNLNLNRDFIK----------------LDAPEMRAFAKLFNKWNPDLFIDNHVTDGA-DYQYDLT  171 (266)
T ss_pred             cCceecccceecCCCCcc----------------cCCHHHHHHHHHHHHhCCCEEEEeccCCCc-Cceeeec
Confidence            468999999999999973                479999999999999999999999988764 6777653

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins

Probab=99.15  E-value=5.7e-11  Score=91.74  Aligned_cols=58  Identities=22%  Similarity=0.307  Sum_probs=49.8

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC----CceEEEEeccCCceEE-eeCCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAIVAS-YPFDDS   95 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~----~~~l~is~Hsg~~~i~-yPy~~s   95 (96)
                      ..|.|+.|+||||+|             .++.|++|||+.||.++++..    +++++|+||+.++... |+|+.+
T Consensus       126 ~~R~~~~G~DLNR~y-------------~~p~~~~~Pei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~  188 (304)
T cd06236         126 HYRTDTRGVNLNRVY-------------LNPDPELHPSIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNA  188 (304)
T ss_pred             ccccCCcCCCcCcCC-------------CCCCcccCHHHHHHHHHHHHhhccCCceEEEEecccccccceEeeecC
Confidence            348899999999986             357899999999999999863    5999999999999876 888754

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.15  E-value=7.8e-11  Score=86.75  Aligned_cols=51  Identities=35%  Similarity=0.412  Sum_probs=44.1

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC--CceEEe
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG--AIVASY   90 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg--~~~i~y   90 (96)
                      +.+|.|++|+||||+|+.                .++|||+++.+++.+.++.+++++|++  +....|
T Consensus        87 ~~~R~n~~g~DLNRd~~~----------------~~~pEt~~~~~~~~~~~p~~~iDlH~~~~g~~~~~  139 (226)
T cd03857          87 LFTRENANGLDLNRDFLK----------------LTQPETRAVREVFIEWKPQFFIDLHEYGFGAVSFY  139 (226)
T ss_pred             hccccCCCcccCCCCCCC----------------cCCHHHHHHHHHHHHcCCeEEEEcCCCCCcceecC
Confidence            348999999999999974                489999999999999999999999999  544444

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.02  E-value=6.5e-10  Score=82.94  Aligned_cols=47  Identities=30%  Similarity=0.502  Sum_probs=42.5

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CceEEEEeccCC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGA   85 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~--~~~l~is~Hsg~   85 (96)
                      ..+|.|++|+|||||||.               +.++||++++++++.+.  ++.++|+||+++
T Consensus        92 ~~~R~n~~g~DLNR~F~~---------------~~~~~E~~al~~~~~~~~~~~~~~IDLH~~~  140 (236)
T cd06231          92 AITRWNRNGIDPNRSFRS---------------ESPSPEVRLLMEWLRRLGAAFDLHIDLHEDT  140 (236)
T ss_pred             cCccCCCCCccccCCCCC---------------CCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Confidence            478999999999999975               35789999999999987  799999999998

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins

Probab=98.98  E-value=9.2e-10  Score=83.55  Aligned_cols=58  Identities=24%  Similarity=0.336  Sum_probs=46.2

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----CCceEEEEeccCCceEE-eeCCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN----NPFVLSGNLHGGAIVAS-YPFDDS   95 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~----~~~~l~is~Hsg~~~i~-yPy~~s   95 (96)
                      ..|.++.|+||||||..             +.+.+.||+.++.++++.    .+++++++|||.+++.+ |||+++
T Consensus       104 ~~R~~~~G~DLNR~w~~-------------p~~~~~P~i~~~k~li~~l~~~~~i~~ylDlHghs~~~~~F~yG~~  166 (261)
T cd06907         104 NYRCSLAGRDLNRNYKT-------------PLKDSFPTIWYTKNMVKRLLEEREVILYCDLHGHSRKNNVFMYGCE  166 (261)
T ss_pred             CCcCCCcCCCCCcCCCC-------------CCcccCchHHHHHHHHHHHHhcCCeEEEEEeccchhccceEeecCC
Confidence            45889999999999975             236688997666665444    46999999999999955 999864

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N

>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.98  E-value=7.4e-10  Score=83.87  Aligned_cols=48  Identities=19%  Similarity=0.151  Sum_probs=43.6

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCce
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIV   87 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~   87 (96)
                      +.+|.|++|+||||||.                ++++|||+++++++.+..+.+++++|++++.
T Consensus       109 ~~~R~na~g~DlNRD~~----------------~~~~pEtra~~~~~~~~~P~v~iD~He~~~~  156 (268)
T cd06242         109 YFQRTLATGYDPNRDHT----------------KLARQQTRDIKEAFSKFNPHIAIDAHEYGAF  156 (268)
T ss_pred             hccccCCcCcccCCCCC----------------cccCHHHHHHHHHHHHhCCcEEEEeccCCcc
Confidence            45699999999999994                4689999999999999999999999999886

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=98.48  E-value=3.6e-07  Score=70.06  Aligned_cols=50  Identities=22%  Similarity=0.359  Sum_probs=39.1

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHH---HHHHHHHHHhC--CceEEEEeccCCce
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE---TLAMISFIKNN--PFVLSGNLHGGAIV   87 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpE---t~Av~~~~~~~--~~~l~is~Hsg~~~   87 (96)
                      ..|.|..|+||||||..             +.|...||   +++|++++.+.  ++++++++||++..
T Consensus       110 n~Rc~~~G~DLNR~w~~-------------p~~~~~P~i~~~k~l~~~l~~~~~~~~~yiDlHghs~~  164 (278)
T cd06906         110 NHRCSLSGEDLNRQWQS-------------PNPELHPTIYHTKGLLQYLAAIKRSPLVYCDYHGHSRK  164 (278)
T ss_pred             ccccCCCCCCCCCCCCC-------------CCcccChHHHHHHHHHHHHHHhCCCceEEEeecccccc
Confidence            46778899999999863             35556676   67777888753  58899999999876

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna

>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=97.49  E-value=0.00018  Score=55.36  Aligned_cols=20  Identities=55%  Similarity=0.702  Sum_probs=17.1

Q ss_pred             CccCCCCCCCCcCCCCCCCC
Q psy17408         22 ARFVGRNNANGVDLNRNFPD   41 (96)
Q Consensus        22 ~w~~~R~N~~GVDLNRNFp~   41 (96)
                      .....|.|.+||||||||-+
T Consensus       101 f~~~~R~nedgvDLNRnf~d  120 (283)
T cd06233         101 FAHLRRVNENNVDLNRNFLD  120 (283)
T ss_pred             HhhcccCCCCCCChhhcccc
Confidence            34688899999999999965

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=97.43  E-value=0.00029  Score=53.89  Aligned_cols=43  Identities=16%  Similarity=-0.002  Sum_probs=38.0

Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCC
Q psy17408         27 RNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA   85 (96)
Q Consensus        27 R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~   85 (96)
                      +.+..|+||||+|=                ..+.||++++++++.+..+.+.+++|..|
T Consensus       137 ~~~y~g~DlNRD~~----------------~~~~~et~~~~~~~~~w~P~v~~D~He~g  179 (273)
T cd06240         137 YGKYVGHDNNRDGY----------------MNQQETTNNSRKLFLEWHPQIMYDLHQSG  179 (273)
T ss_pred             cCccCCcCCCcccc----------------hhcCHHHHHHHHHHHhcCCcEEEEcccCC
Confidence            56778999999982                36899999999999999999999999774

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function

Probab=97.43  E-value=0.00039  Score=54.71  Aligned_cols=34  Identities=15%  Similarity=-0.037  Sum_probs=22.9

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhC----CceEEEEeccCCc
Q psy17408         51 EQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAI   86 (96)
Q Consensus        51 ~y~G~~p~SEpEt~Av~~~~~~~----~~~l~is~Hsg~~   86 (96)
                      +|.|..|  +.-++.|..+++++    .-++.|.+|+|..
T Consensus       183 fYGG~~p--~wS~~~L~~il~~~~~~~~~v~~iDlHTGlG  220 (341)
T PF10994_consen  183 FYGGTEP--EWSNRTLREILREHLAGAERVAWIDLHTGLG  220 (341)
T ss_pred             ccCCCCc--cHHHHHHHHHHHHHhhcCcEEEEEEeCCCCC
Confidence            5777443  33455566666654    5788999999876

>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=96.90  E-value=0.0013  Score=49.83  Aligned_cols=49  Identities=27%  Similarity=0.374  Sum_probs=30.7

Q ss_pred             CCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh---CCceEEEEeccCC-ceEEeeC
Q psy17408         29 NANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN---NPFVLSGNLHGGA-IVASYPF   92 (96)
Q Consensus        29 N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~---~~~~l~is~Hsg~-~~i~yPy   92 (96)
                      ...|.||||+||-...             .|  +++.++.++.+   ...+..|+||+++ ...+.|+
T Consensus        73 ~~d~~dlNR~fpg~~~-------------g~--~~~r~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~  125 (288)
T cd06254          73 PEDGKNLNRVFPGDKD-------------GT--LTERIAYFLTEEVIDKADFLIDLHSGDGNEQLRPY  125 (288)
T ss_pred             CCCCCchhhcCCCCCC-------------CC--HHHHHHHHHHHHHHhhCcEEEECCCCCCccccCce
Confidence            4589999999985321             13  34444444433   2578899999986 3344444

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=96.71  E-value=0.0017  Score=49.27  Aligned_cols=49  Identities=27%  Similarity=0.233  Sum_probs=30.4

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH--HHHHHHHHhCCceEEEEeccCCc
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET--LAMISFIKNNPFVLSGNLHGGAI   86 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt--~Av~~~~~~~~~~l~is~Hsg~~   86 (96)
                      ...|.+..|.||||+||-..             ..+..|.  .++.+.+.. ..++.|+||+++.
T Consensus        69 ~~~R~~~d~~dlNR~fpg~~-------------~g~~~~~~a~~i~~~~~~-~~d~~iDlHs~~~  119 (287)
T cd06251          69 NQSRYLPDRRDLNRSFPGSK-------------NGSLASRIAHLFFTEILS-HADYGIDLHTGAI  119 (287)
T ss_pred             hccccCCCccCHhhcCCCCC-------------CCCHHHHHHHHHHHHHHh-hCCEEEEcCCCCC
Confidence            45677778999999998421             1122222  233332322 3889999999973

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases

Probab=96.56  E-value=0.0049  Score=48.50  Aligned_cols=27  Identities=7%  Similarity=-0.057  Sum_probs=18.3

Q ss_pred             HHHHHHh--CCceEEEEeccCCceEEeeC
Q psy17408         66 MISFIKN--NPFVLSGNLHGGAIVASYPF   92 (96)
Q Consensus        66 v~~~~~~--~~~~l~is~Hsg~~~i~yPy   92 (96)
                      +...+.+  ...++.|.||+++..+-|.|
T Consensus       149 la~~l~~~~~~aD~~IDLHsg~~~~~~vy  177 (359)
T cd06250         149 LRLTLQRLALDADIVLDLHCDDEAVLHLY  177 (359)
T ss_pred             HHHHHHHHhhcCCEEEECCCCCccCceEE
Confidence            5554443  36889999999988654433

This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding

>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3

Probab=96.51  E-value=0.0046  Score=45.89  Aligned_cols=50  Identities=20%  Similarity=0.083  Sum_probs=32.2

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCc
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAI   86 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~   86 (96)
                      ...|.+.  +||||+||-.-.          ....++.+.++|.+.+... ..+.|.+|++..
T Consensus        48 ~~~R~~~--~DLNR~fpg~~~----------~~~~~~~~a~~l~~~i~~~-~d~~iDlH~~~~   97 (252)
T cd06230          48 AGQRYLD--RDLNRIFPGDPD----------SGTYEDRLAAELCPELEGL-ADAVLDLHSTSS   97 (252)
T ss_pred             hCCCCCC--cCCCCCCCCCCC----------CCCHHHHHHHHHHHHHhhh-ccEEEECCCCCC
Confidence            4566666  999999984211          0122444455565555442 789999999985

5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=95.97  E-value=0.016  Score=44.21  Aligned_cols=52  Identities=21%  Similarity=0.234  Sum_probs=32.2

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCce
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIV   87 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~   87 (96)
                      ...|.++ .++||||.||-.  .         ....+|..+.++.+-+. ....+.|.||+++.-
T Consensus        73 ~~~R~~p~d~~dlNR~fpg~--~---------~g~~~~r~A~~~~~~~~-~~~d~~iDlHs~~~~  125 (293)
T cd06255          73 ARTRMSPFDELDLNRTFPGN--P---------NGMVTQQMAHALFEEVR-GVADYLVDLHTMTTI  125 (293)
T ss_pred             hhcccCCCCCCCcccCCCCC--C---------CCCHHHHHHHHHHHHHH-hcCCEEEECCCCCCC
Confidence            4567776 899999999841  0         01223333444433332 256899999999764

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=95.44  E-value=0.026  Score=43.49  Aligned_cols=48  Identities=23%  Similarity=0.262  Sum_probs=30.7

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh---CCceEEEEeccCCc
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN---NPFVLSGNLHGGAI   86 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~---~~~~l~is~Hsg~~   86 (96)
                      ...|.++ .|.||||.||-..              ..+. ++.+..++.+   ...++.|.||+++.
T Consensus        83 ~~~R~~p~D~~DLNR~Fpg~~--------------~gs~-~~riA~~i~~~l~~~aD~~iDLHt~~~  134 (316)
T cd06252          83 AGTRTSPIDGGNLNRVFPGDP--------------DGTV-TEMIAHYLTTELLPRADYVIDLHSGGR  134 (316)
T ss_pred             hccccCCCCCCcHHhhCCCCC--------------CCCH-HHHHHHHHHHhhhhcCcEEEEccCCCC
Confidence            4567665 6899999998521              1222 3444444443   26789999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=95.27  E-value=0.03  Score=42.43  Aligned_cols=26  Identities=27%  Similarity=0.137  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHhCCceEEEEeccCCc
Q psy17408         61 PETLAMISFIKNNPFVLSGNLHGGAI   86 (96)
Q Consensus        61 pEt~Av~~~~~~~~~~l~is~Hsg~~   86 (96)
                      .|++++++++.+..+.+-|++|++-.
T Consensus       120 ~Es~~~~~~~~~~~~~~hiDlHeyp~  145 (240)
T cd06232         120 GEREARHQALAKSGAQLHVNLHGYPA  145 (240)
T ss_pred             hHHHHHHHHHHhhCCcEEEECCCCCc
Confidence            89999999999999999999998753

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>TIGR02994 ectoine_eutE ectoine utilization protein EutE

Probab=95.16  E-value=0.049  Score=42.42  Aligned_cols=49  Identities=18%  Similarity=0.230  Sum_probs=32.7

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh---CCceEEEEeccCCce
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN---NPFVLSGNLHGGAIV   87 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~---~~~~l~is~Hsg~~~   87 (96)
                      ...|.+. .|.||||.||-              .+..+. |+.|+..+.+   ...++.|.||+++..
T Consensus        96 ~~~r~~p~d~~nlNR~fPG--------------~~~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~~  148 (325)
T TIGR02994        96 AGTRTSPIDRGNLNRSFPG--------------RPDGTV-TEKIADYFQRHLLPLADIVLDFHSGGKT  148 (325)
T ss_pred             hhCCCCCCCCCccCCCCCC--------------CCCCCH-HHHHHHHHHHhHHhhCCEEEECCCCCcc
Confidence            4556554 79999999984              122222 5556555543   258899999999873

Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.

>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3

Probab=94.93  E-value=0.016  Score=43.26  Aligned_cols=58  Identities=26%  Similarity=0.203  Sum_probs=36.7

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CceEEEEeccCCce
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIV   87 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~---~~~l~is~Hsg~~~   87 (96)
                      ...|... .|.||||.||-.-...      ....+....+|+.+...+.+.   +.++.|.||+++.-
T Consensus        51 ~~~R~~~~d~~dLNR~Fpg~~~~~------~~~~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~  112 (292)
T PF04952_consen   51 QGTRFVPIDGRDLNRCFPGDALGS------SLQEDYEATETERIAHALFEEILPDADYVIDLHSGSSS  112 (292)
T ss_dssp             HTSSSSTTTSSBGGGSTTHHHHCH------CTTHHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESST
T ss_pred             hccccCCCCCCCHHHhCCCCcccc------ccccccchhHHHHHHHHHhhhhhccceEEEEeccCCCC
Confidence            3456665 8999999998421110      000111225677788877753   58999999998753

5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....

>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=94.80  E-value=0.063  Score=41.14  Aligned_cols=48  Identities=23%  Similarity=0.221  Sum_probs=29.3

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh--CCceEEEEeccCCc
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN--NPFVLSGNLHGGAI   86 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~--~~~~l~is~Hsg~~   86 (96)
                      ...|.++ .|.||||.||-.-              ..+ .++.++..+.+  ...++.|.||+++.
T Consensus        74 ~~~R~~p~d~~dlNR~Fpg~~--------------~g~-~~~riA~~~~~~~~~~d~~iDLHsg~~  124 (298)
T cd06253          74 LGTRFWPTDNSDINRMFPGDP--------------QGE-TTQRIAAAVFEDVKGADYCIDLHSSNI  124 (298)
T ss_pred             HhhCcCCCCCCcccccCCCCC--------------CCc-HHHHHHHHHHHHhcCCCEEEEccCCCc
Confidence            3566554 6999999998411              111 23334333333  35789999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases

Probab=93.15  E-value=0.31  Score=37.35  Aligned_cols=47  Identities=19%  Similarity=0.101  Sum_probs=26.7

Q ss_pred             CcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CceEEEEeccC
Q psy17408         32 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGG   84 (96)
Q Consensus        32 GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~---~~~l~is~Hsg   84 (96)
                      ..||||-||-.....      ++.....+...+.+.+.+...   +..+.|.||++
T Consensus        55 d~DLNR~Fpg~~~~~------~~~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHst  104 (282)
T cd06909          55 DTDLNRCFTLENLSN------SELLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNT  104 (282)
T ss_pred             CCCCCCCCCCCccCC------CCCCCHHHHHHHHHHHHHhhccCCCceEEEECCCC
Confidence            589999998643221      011111223344454544432   47899999995

ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>PRK02259 aspartoacylase; Provisional

Probab=92.86  E-value=0.33  Score=36.96  Aligned_cols=44  Identities=23%  Similarity=0.254  Sum_probs=25.5

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHH---HHHHHHHh---CCceEEEEeccCC
Q psy17408         33 VDLNRNFPDQFDSSSERREQPLNVKKLEPETL---AMISFIKN---NPFVLSGNLHGGA   85 (96)
Q Consensus        33 VDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~---Av~~~~~~---~~~~l~is~Hsg~   85 (96)
                      .||||.||-.....         ...+..|.+   .+.+.+..   .+.++.|.||+++
T Consensus        58 ~DLNR~Fpg~~~~~---------~~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttt  107 (288)
T PRK02259         58 RDLNRSFRLDLLQN---------PDLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTT  107 (288)
T ss_pred             ccCCCCCCCccccC---------CCCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCC
Confidence            79999998532210         111334443   44444421   2578999999964

>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]

Probab=92.77  E-value=0.069  Score=42.50  Aligned_cols=16  Identities=75%  Similarity=0.956  Sum_probs=14.5

Q ss_pred             CCCCCCCcCCCCCCCC
Q psy17408         26 GRNNANGVDLNRNFPD   41 (96)
Q Consensus        26 ~R~N~~GVDLNRNFp~   41 (96)
                      .|.|++|+||||+|+.
T Consensus       207 lr~na~~~dLnr~~~~  222 (374)
T COG2866         207 LRTNANGVDLNRNFIA  222 (374)
T ss_pred             cccccCccchhhhccC
Confidence            4999999999999965

>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=92.68  E-value=0.26  Score=37.18  Aligned_cols=50  Identities=16%  Similarity=-0.017  Sum_probs=28.4

Q ss_pred             CcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh-CCceEEEEeccCCceEEeeC
Q psy17408         32 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN-NPFVLSGNLHGGAIVASYPF   92 (96)
Q Consensus        32 GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~-~~~~l~is~Hsg~~~i~yPy   92 (96)
                      +.||||.||-.+..        |+.  ...|.+.-..+..- ...++.|.||+++.. .+|+
T Consensus        60 ~~dLNR~Fpg~~~~--------g~~--~~~e~~~A~~l~~~i~~aD~~iDLHt~~~~-~~p~  110 (272)
T cd06910          60 DEDMNRVWSPDVLD--------GPR--DSIELRRARELRPVIDTADYLLDLHSMQWP-SPPL  110 (272)
T ss_pred             CCCcCCCCCCcccC--------CCc--ccHHHHHHHHHHHHHhhCCEEEECCCCCCC-CCCE
Confidence            68999999853321        111  13454443232211 146689999999873 4554

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=92.60  E-value=0.24  Score=38.75  Aligned_cols=49  Identities=16%  Similarity=0.185  Sum_probs=31.5

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      ...|....|.||||-||-...            ...+...+.|.+.+.+....+.|.+|++
T Consensus        82 ~~~R~~~d~~DLNR~Fpg~~~------------s~e~r~A~~l~~~l~~~~~d~~IDLHst  130 (327)
T cd06256          82 AGVRRLDGQPDYNRCWPGPYD------------DPEGRLAEEVLELLADERPEASIDIHNN  130 (327)
T ss_pred             hCcccCCCCCCccCCCCCCCC------------CHHHHHHHHHHHHHHhcCCcEEEECCCC
Confidence            355666678999999984111            1233335556666655556789999976

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>KOG3641|consensus

Probab=92.35  E-value=0.15  Score=43.19  Aligned_cols=51  Identities=24%  Similarity=0.244  Sum_probs=38.5

Q ss_pred             CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CceEEEEeccCCceEE
Q psy17408         26 GRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVAS   89 (96)
Q Consensus        26 ~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~------~~~l~is~Hsg~~~i~   89 (96)
                      -|-.-.|.||||-|-.             +.+.+.|+..++.+.++..      ...+++.+|+-++.++
T Consensus       488 yRCSL~G~DLNR~w~t-------------ps~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n  544 (650)
T KOG3641|consen  488 YRCSLMGLDLNRMWST-------------PSPASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVN  544 (650)
T ss_pred             ceeccccchhhhhcCC-------------CCcccchhHHhHHHHHhhhhcccccCceEeecccccccccc
Confidence            3556689999999865             4556888877777666652      3788999999999864

>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3

Probab=90.74  E-value=0.66  Score=35.98  Aligned_cols=52  Identities=23%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCcHH-HHH----HHHHHHhC---CceEEEEeccC---C---ceEEeeCC
Q psy17408         33 VDLNRNFPDQFDSSSERREQPLNVKKLEPE-TLA----MISFIKNN---PFVLSGNLHGG---A---IVASYPFD   93 (96)
Q Consensus        33 VDLNRNFp~~w~~~~~~~~y~G~~p~SEpE-t~A----v~~~~~~~---~~~l~is~Hsg---~---~~i~yPy~   93 (96)
                      .||||-||-....         ....+|.+ .+.    +..++...   .....+.||+.   +   .++++|+.
T Consensus        99 ~DLNR~FpG~~~~---------~~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta~~~s~~~~f~~~p~~  164 (322)
T cd03855          99 ENLNRLFSGRHQK---------DEPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTAIRGSKHEKFAVYPFL  164 (322)
T ss_pred             CCccCCCCCCccc---------CCCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCCCCCccCCceeecccc
Confidence            5999999843221         01123332 122    33344443   57889999995   4   56777764

5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.

>COG3608 Predicted deacylase [General function prediction only]

Probab=87.50  E-value=1  Score=35.60  Aligned_cols=51  Identities=24%  Similarity=0.241  Sum_probs=32.7

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CceEEEEeccCCceEE
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIVAS   89 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~---~~~l~is~Hsg~~~i~   89 (96)
                      ..+|.+. .+.++||+||-   .          .-.|  =|.++.++++++   .-++.+.||+++.-..
T Consensus        97 ~~~R~~p~d~~N~NR~fPg---~----------~dgs--~t~ria~~l~r~L~~~aD~VlDlHsg~~~~~  151 (331)
T COG3608          97 AQGRFSPGDDTNLNRAFPG---R----------PDGS--ATERIADRLKRLLLPLADIVLDLHSGGEGLD  151 (331)
T ss_pred             hhcccCCCCCCcccccCCC---C----------CCCC--HHHHHHHHHHHhhhcccCEEEEccCCCCccc
Confidence            3556555 78999999992   0          0012  245556666443   3678999999987643

>PRK05324 succinylglutamate desuccinylase; Provisional

Probab=82.67  E-value=4.3  Score=31.70  Aligned_cols=54  Identities=22%  Similarity=0.198  Sum_probs=29.5

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH---HHHHH----HHHh--CCceEEEEeccC---C---ceEE
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET---LAMIS----FIKN--NPFVLSGNLHGG---A---IVAS   89 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt---~Av~~----~~~~--~~~~l~is~Hsg---~---~~i~   89 (96)
                      ..|..  ..||||-||-.+.+.          + +.+|.   +.|.+    ++..  ...++.+.||+.   +   ..++
T Consensus        98 ~~R~v--d~DLNR~FpG~~~~~----------~-~~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta~~gs~~~~f~~  164 (329)
T PRK05324         98 GKRYL--DEDLNRLFGGRHQQF----------P-GSDEARRAAELEQAVEDFFAAGAERVRWHYDLHTAIRGSKHEQFAV  164 (329)
T ss_pred             CcccC--CCCcccCCCCCcCCC----------C-CcHHHHHHHHHHHHHHHHhcccCccceEEEECCCCCccccCCceee
Confidence            44443  469999999644321          1 11144   33333    3322  136789999984   3   4456


Q ss_pred             ee
Q psy17408         90 YP   91 (96)
Q Consensus        90 yP   91 (96)
                      +|
T Consensus       165 ~p  166 (329)
T PRK05324        165 LP  166 (329)
T ss_pred             ee
Confidence            66

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	96
3mn8_A	435	Structure Of Drosophila Melanogaster Carboxypeptida		3e-19
1qmu_A	380	Duck Carboxypeptidase D Domain Ii Length = 380		8e-17
2nsm_A	439	Crystal Structure Of The Human Carboxypeptidase N (		1e-15
1uwy_A	426	Crystal Structure Of Human Carboxypeptidase M Lengt		2e-14

>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D Isoform 1b Short Length = 435

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 12  LPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK 71
           L  EG+C SL  +VGR NA  +DLNR+FPD+ + S   +   L  +  +PET A++++I 
Sbjct: 150 LSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQ---LRAQSRQPETAALVNWIV 206
Query: 72  NNPFVLSGNLHGGAIVASYPFDDS 95
           + PFVLS N HGGA+VASYP+D+S
Sbjct: 207 SKPFVLSANFHGGAVVASYPYDNS 230

>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii Length = 380

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 9/72 (12%)
Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           VGRNN+N  DLNRNFPDQF   ++           +PETLA++S++K  PFVLS NLHGG
Sbjct: 130 VGRNNSNNYDLNRNFPDQFFQVTD---------PPQPETLAVMSWLKTYPFVLSANLHGG 180
Query: 85  AIVASYPFDDSK 96
           ++V +YPFDD +
Sbjct: 181 SLVVNYPFDDDE 192

>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N (kininase I) Catalytic Domain Length = 439

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Query: 19  NSLARFVGRNNANGVDLNRNFPD---------QFDSSSERREQPLNVK-KLEPETLAMIS 68
           N     VGRNNANGVDLNRNFPD         ++   +     P N K ++EPET A+I 
Sbjct: 124 NKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIR 183
Query: 69  FIKNNPFVLSGNLHGGAIVASYPFDDS 95
           ++ +  FVLS NLHGGA+VA+YP+D S
Sbjct: 184 WMHSFNFVLSANLHGGAVVANYPYDKS 210

>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M Length = 426

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 9/70 (12%)
Query: 25  VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG 84
           +GR N N  DLNRNFPD F+ ++  R+         PET+A++ ++K   FVLS NLHGG
Sbjct: 125 IGRENYNQYDLNRNFPDAFEYNNVSRQ---------PETVAVMKWLKTETFVLSANLHGG 175
Query: 85  AIVASYPFDD 94
           A+VASYPFD+
Sbjct: 176 ALVASYPFDN 185

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	96
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	2e-20
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	3e-20
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	3e-17
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	5e-16
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	8e-12
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	9e-08
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	6e-06
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	3e-04
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	5e-04
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	8e-04

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435

 Score = 82.7 bits (204), Expect = 2e-20
 Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 3/83 (3%)

Query: 14  YEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN 73
            EG+C SL  +VGR NA  +DLNR+FPD+ + S   + +  +    +PET A++++I + 
Sbjct: 152 QEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSR---QPETAALVNWIVSK 208

Query: 74  PFVLSGNLHGGAIVASYPFDDSK 96
           PFVLS N HGGA+VASYP+D+S 
Sbjct: 209 PFVLSANFHGGAVVASYPYDNSL 231

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 10/92 (10%)

Query: 14  YEGSCNSLARFVGRNNANGVDLNRNFPDQFDS-------SSERREQPL---NVKKLEPET 63
                N     VGRNNANGVDLNRNFPD                  PL      ++EPET
Sbjct: 119 AAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPET 178

Query: 64  LAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 95
            A+I ++ +  FVLS NLHGGA+VA+YP+D S
Sbjct: 179 RAVIRWMHSFNFVLSANLHGGAVVANYPYDKS 210

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380

 Score = 73.7 bits (181), Expect = 3e-17
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 10/83 (12%)

Query: 14  YEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN 73
                +      GRNN+N  DLNRNFPDQF   ++  +         PETLA++S++K  
Sbjct: 120 KSQEGDRGGTV-GRNNSNNYDLNRNFPDQFFQVTDPPQ---------PETLAVMSWLKTY 169

Query: 74  PFVLSGNLHGGAIVASYPFDDSK 96
           PFVLS NLHGG++V +YPFDD +
Sbjct: 170 PFVLSANLHGGSLVVNYPFDDDE 192

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426

 Score = 70.4 bits (172), Expect = 5e-16
 Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 9/70 (12%)

Query: 26  GRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA 85
           GR N N  DLNRNFPD F+ ++  R+         PET+A++ ++K   FVLS NLHGGA
Sbjct: 126 GRENYNQYDLNRNFPDAFEYNNVSRQ---------PETVAVMKWLKTETFVLSANLHGGA 176

Query: 86  IVASYPFDDS 95
           +VASYPFD+ 
Sbjct: 177 LVASYPFDNG 186

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score = 58.1 bits (141), Expect = 8e-12
 Identities = 21/103 (20%), Positives = 32/103 (31%), Gaps = 24/103 (23%)

Query: 14  YEGSCNSLARFVGRNNAN----GVDLNRNFPDQFDSS--------SE--RREQPLNVKKL 59
                    R   + N+     G DLNRN+  ++           SE  R     +    
Sbjct: 120 ISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFS---- 175

Query: 60  EPETLAMISFIKN------NPFVLSGNLHGGAIVASYPFDDSK 96
            PET AM  FI +               H  + +  YP+  + 
Sbjct: 176 APETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTY 218

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Length = 388

 Score = 47.1 bits (111), Expect = 9e-08
 Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 13/69 (18%)

Query: 27  RNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAI 86
           R NA G DLNR + +                +  PE   +   +K +   L  ++HG   
Sbjct: 231 RTNAAGQDLNRAWLEPS-------------AERSPEVWFVQQEMKRHGVDLFLDIHGDEE 277

Query: 87  VASYPFDDS 95
           +        
Sbjct: 278 IPHVFAAGC 286

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Length = 403

 Score = 41.7 bits (97), Expect = 6e-06
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 13/69 (18%)

Query: 27  RNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAI 86
           R NA G +LNR + +                +  PE L +   I      L  ++HG   
Sbjct: 245 RTNAAGANLNREWMEPD-------------AERSPEVLVVRDAIHAIGCDLFFDIHGDED 291

Query: 87  VASYPFDDS 95
           +       S
Sbjct: 292 LPYVFAAGS 300

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A Length = 401

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 14/74 (18%)

Query: 32  GVDLNRNFPDQF-------DSSSE--RREQPLNVKKLEPETLAMISFIKNN-PFVLSGNL 81
           GVD NRN+   F       +  S+        +    E E  +++ FIK++        L
Sbjct: 232 GVDPNRNWDAGFGGPGASSNPCSDSYHGPSANS----EVEVKSIVDFIKSHGKVKAFIIL 287

Query: 82  HGGAIVASYPFDDS 95
           H  + +  +P+   
Sbjct: 288 HSYSQLLMFPYGYK 301

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1 Length = 433

 Score = 36.4 bits (84), Expect = 5e-04
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 12/50 (24%)

Query: 32  GVDLNRNFPDQF------DSSSE--RREQPLNVKKLEPETLAMISFIKNN 73
           GVDLNRNF   +         S+        +    EPE+  +   I  +
Sbjct: 250 GVDLNRNFGMNWGTASSSSVCSDTFHGRSAFS----EPESSVIRDIIAEH 295

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1 Length = 303

 Score = 35.8 bits (83), Expect = 8e-04
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 13/54 (24%)

Query: 32  GVDLNRNFPDQF-------DSSSE--RREQPLNVKKLEPETLAMISFIKNNPFV 76
           GVD NRN+   F       +  S+        +    E E  +++ FIK++  V
Sbjct: 134 GVDPNRNWDAGFGGPGASSNPCSDSYHGPSANS----EVEVKSIVDFIKSHGKV 183

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	96
3v38_A	326	Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Th	99.94
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	99.93
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	99.91
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	99.88
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	99.88
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	99.88
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	99.88
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	99.88
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	99.87
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	99.87
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	99.87
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	99.85
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	99.85
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	99.85
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	99.85
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	99.83
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	99.83
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	99.81
4axv_A	243	MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}	99.68
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	99.49
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	99.46
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	99.46
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	99.45
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	99.41
3fmc_A	368	Putative succinylglutamate desuccinylase / aspart;	98.75
2qj8_A	332	MLR6093 protein; structural genomics, joint center	98.3
3cdx_A	354	Succinylglutamatedesuccinylase/aspartoacylase; str	98.14
3na6_A	331	Succinylglutamate desuccinylase/aspartoacylase; st	97.09
1yw6_A	335	Succinylglutamate desuccinylase; alpha-beta protei	96.44
2gu2_A	312	ASPA protein; aspartoacylase family, aminoacylase-	95.16
2bco_A	350	Succinylglutamate desuccinylase; NESG, VPR14, stru	94.84
1yw4_A	341	Succinylglutamate desuccinylase; alpha-beta protei	94.32
3nh4_A	327	Aspartoacylase-2; mercapturates, hydrolase; 2.00A	89.96

>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A

Probab=99.94  E-value=3.5e-27  Score=180.48  Aligned_cols=90  Identities=19%  Similarity=0.185  Sum_probs=75.6

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCC-C----C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSS-S----E-RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~-~----~-~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++...+.+. ..+|+++|.     +|.|||||||||++|+.. +    . ++.|+|+.|+|||||+||++|++++
T Consensus       111 ~NPDG~~~~~~~~~-~r~WRknR~~~~~~~~~GvDLNRNf~~~w~~~~g~s~~pc~~~Y~G~~p~sEpEt~av~~~i~~~  189 (326)
T 3v38_A          111 INPDGGEYDISSGS-YKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSR  189 (326)
T ss_dssp             SCHHHHHHHHTTSS-CCCCCSCSCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred             ecCChhhccccCCc-cccccccCCCCCCCCcCccccccCCCcccccCCCCCCCCCccccCCCCCCccHHHHHHHHHHHhh
Confidence            46777777665432 257999986     488999999999999742 1    2 3799999999999999999999986


Q ss_pred             ------CceEEEEeccCCceEEeeCCCC
Q psy17408         74 ------PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ------~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                            +|+++|++||++++|+|||+++
T Consensus       190 ~~~~~~~~~~~i~~Hs~~~~il~Pyg~~  217 (326)
T 3v38_A          190 VVGGKQQIKTLITFHTYSELILYPYGYT  217 (326)
T ss_dssp             EETTEECEEEEEEEEESSSEEEESCSSC
T ss_pred             ccccccCeEEEEEecCCCCEEEecCCCC
Confidence                  7999999999999999999986

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*

Probab=99.93  E-value=9.2e-27  Score=182.53  Aligned_cols=89  Identities=19%  Similarity=0.249  Sum_probs=78.4

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCC-CCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPD-QFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~-~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++.+.+++   .+|+++|.     ||+|||||||||+ +|+..+.     ++.|+|+.|+|||||+||++|++++
T Consensus       201 ~NPDG~~~~~~~~---r~wrknR~~~~~~n~~GvDLNRNf~~~~w~~~g~s~~pc~~~y~G~~p~sepEt~al~~~i~~~  277 (401)
T 3dgv_A          201 VNVDGYDYTWKKD---RMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLRRN  277 (401)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred             eccchhhheeccC---cceeecccCCCCCCCCCCChhhcCCccccccccCCCCCcccccCCCCcCcCHHHHHHHHHHHHh
Confidence            4788888887776   45899994     9999999999999 9976432     3799999999999999999999998


Q ss_pred             --CceEEEEeccCCceEEeeCCCCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFDDSK   96 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~~s~   96 (96)
                        +|+++|++||++++|+|||+++.
T Consensus       278 ~~~~~~~i~lHs~~~~i~yPy~~~~  302 (401)
T 3dgv_A          278 IKHIKAYISMHSYSQKIVFPYSYSR  302 (401)
T ss_dssp             TTTEEEEEEEEESSCEEEESCSSSS
T ss_pred             CcCceEEEEEecCCCEEEeCCCCCC
Confidence              79999999999999999999863

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}

Probab=99.91  E-value=5.5e-25  Score=173.40  Aligned_cols=89  Identities=47%  Similarity=0.855  Sum_probs=74.2

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      .|+|+++.+.++++....|+.+|.|++|||||||||++|...+   .+.|+.|+|||||+||++|+++++|+++++|||+
T Consensus       143 ~NPDG~~~~~~~~r~~~~~~~~R~n~~GvDLNRnf~~~w~~~~---~~~g~~~~sepEt~al~~~~~~~~~~~~idlHs~  219 (435)
T 3mn8_A          143 MNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSH---VHQLRAQSRQPETAALVNWIVSKPFVLSANFHGG  219 (435)
T ss_dssp             SCHHHHHTSCTTCSSCCGGGTTTSCTTCCCGGGCSCCTTC-----------CCCSCHHHHHHHHHHTTSCCCEEEEEECS
T ss_pred             cCCChhhhhccCccccCCCCCCCccccCCCcccCCCcccCccc---ccCCCCccchHHHHHHHHHHhhcCCEEEEEEeCC
Confidence            5789999998888775555668999999999999999998653   2467789999999999999999999999999999


Q ss_pred             CceEEeeCCCCC
Q psy17408         85 AIVASYPFDDSK   96 (96)
Q Consensus        85 ~~~i~yPy~~s~   96 (96)
                      +++++|||++++
T Consensus       220 ~~~~~yPy~~~~  231 (435)
T 3mn8_A          220 AVVASYPYDNSL  231 (435)
T ss_dssp             SCEEEESCSCCS
T ss_pred             CeEEEcCCCCCc
Confidence            999999999863

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A

Probab=99.88  E-value=2.4e-23  Score=157.85  Aligned_cols=90  Identities=19%  Similarity=0.186  Sum_probs=74.2

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCC-C----C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSS-S----E-RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~-~----~-~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++.+.+.++ ...|+++|.     +|.|||||||||..|... +    . ++.|+|+.|+|||||+||++|+++.
T Consensus       111 ~NPDG~~~~~~~~~-~r~wR~nr~~~~~~~~~GvDLNRnf~~~w~~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~  189 (323)
T 3prt_A          111 INPDGGEYDISSGS-YKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSR  189 (323)
T ss_dssp             SCHHHHHHHHTTSS-CCCCCSCSCCCTTCSCCCCCGGGCSSTTTTSSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred             ecCchheeeeccCC-ccccccCCCCCCCCcccccccccCCCcccCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHHh
Confidence            46777777655322 246888875     278999999999999752 2    1 3799999999999999999999998


Q ss_pred             ------CceEEEEeccCCceEEeeCCCC
Q psy17408         74 ------PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ------~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                            +++++|+||+++++++|||+++
T Consensus       190 ~~~~~~~~~~~idlHs~~~~~~ypy~~~  217 (323)
T 3prt_A          190 VVGGKQQIKTLITFHTYSELILYPYSYT  217 (323)
T ss_dssp             EETTEECEEEEEEEEESSSEEEESCCSC
T ss_pred             hhccccCeEEEEEccCCCceEEecCCCC
Confidence                  7999999999999999999975

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A

Probab=99.88  E-value=3.1e-23  Score=161.82  Aligned_cols=88  Identities=20%  Similarity=0.208  Sum_probs=76.4

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   ..|+++|.     ||.|||||||||..|...+.     ++.|+|+.|+|||||+||++|+++. 
T Consensus       203 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~  279 (402)
T 1kwm_A          203 LNIDGYIYTWTKS---RFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAESEKETKALADFIRNKL  279 (402)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCCCSSCCCCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTT
T ss_pred             eCCcchhhccccc---ceeeccCCCCCCCCCcCcccccCCccccCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhhc
Confidence            4677777777665   34888886     69999999999999986532     3799999999999999999999998 


Q ss_pred             -CceEEEEeccCCceEEeeCCCC
Q psy17408         74 -PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 -~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                       ++++++++|+++++++|||+++
T Consensus       280 ~~~~~~idlHs~~~~~~~Py~~~  302 (402)
T 1kwm_A          280 SSIKAYLTIHSYSQMMIYPYSYA  302 (402)
T ss_dssp             TTEEEEEEEEESSCEEEESCSSS
T ss_pred             cCeeEEEEEeCCCCEEEeCCCCC
Confidence             8999999999999999999975

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1

Probab=99.88  E-value=2.4e-23  Score=156.37  Aligned_cols=88  Identities=18%  Similarity=0.165  Sum_probs=75.8

Q ss_pred             cCCCCceeeecCCccCCCccCCCC------CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN------NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~------N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++.+.+++   ..|+++|.      |+.|||||||||..|...+.     ++.|+|+.|+|||||+||++|+++.
T Consensus       104 ~NPDG~~~~~~~~---~~wr~~r~~~~~~~~~~GvDLNRnfp~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~  180 (303)
T 1dtd_A          104 TNPDGYVFSQTKN---RMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSH  180 (303)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTTCSCBCCCGGGCSSSSTTCTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHH
T ss_pred             ccCccceeeeccc---cccccCCCCCCCCCCCcCcccCCCCCCcCccCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhC
Confidence            4677777776665   35788875      89999999999999986432     3789999999999999999999998


Q ss_pred             -CceEEEEeccCCceEEeeCCCC
Q psy17408         74 -PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 -~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                       +++++++||+++++++|||+++
T Consensus       181 ~~~~~~idlHs~~~~~~~Py~~~  203 (303)
T 1dtd_A          181 GKVKAFIILHSYSQLLMFPYGYK  203 (303)
T ss_dssp             CCEEEEEEEEESSCEEEESCSSC
T ss_pred             CCeEEEEEeeCCCCeEEeCCCCC
Confidence             8999999999999999999874

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...

Probab=99.88  E-value=3e-23  Score=155.85  Aligned_cols=88  Identities=20%  Similarity=0.240  Sum_probs=75.8

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   ..|+++|.     |+.|||||||||..|...+.     ++.|+|+.|+|||||+||++|+++. 
T Consensus       108 ~NPDG~~~~~~~~---~~wrk~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~~  184 (306)
T 1z5r_A          108 LNIDGYIYTWTKN---RMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRNNL  184 (306)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTT
T ss_pred             eCCchhhheeccc---cccccCCCCCCCCCccCCccCCCCCCCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhc
Confidence            4677777777665   34788874     79999999999999986432     3789999999999999999999998 


Q ss_pred             -CceEEEEeccCCceEEeeCCCC
Q psy17408         74 -PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 -~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                       ++++++++|+++++++|||+++
T Consensus       185 ~~~~~~idlHs~~~~~~~Py~~~  207 (306)
T 1z5r_A          185 SSIKAYLTIHSYSQMILYPYSYD  207 (306)
T ss_dssp             TTEEEEEEEEESSSEEEESCSSS
T ss_pred             cCeEEEEEEeCCCCeEEeCCCCC
Confidence             8999999999999999999874

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A

Probab=99.88  E-value=2.2e-23  Score=162.68  Aligned_cols=88  Identities=18%  Similarity=0.165  Sum_probs=75.8

Q ss_pred             cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   ..|+++|     .||.|||||||||..|...+.     ++.|+|+.|+|||||+||++|+++. 
T Consensus       203 ~NPDG~~~~~~~~---r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~  279 (401)
T 1aye_A          203 TNPDGYVFSQTKN---RMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHG  279 (401)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             EcCCCceeccccc---ceeccCCCCCCCCcccccccccCCccccccCCCCCCCCccccCCCCCCcCHHHHHHHHHHHccC
Confidence            4677777766654   4588887     489999999999999985432     3789999999999999999999998 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++++++|+++++++|||+++
T Consensus       280 ~~~~~idlHs~~~~~~~Py~~~  301 (401)
T 1aye_A          280 KVKAFIILHSYSQLLMFPYGYK  301 (401)
T ss_dssp             CEEEEEEEEESSCEEEESCSSS
T ss_pred             CEEEEEEEcCCCCEEEeCCCCC
Confidence            8999999999999999999975

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1

Probab=99.87  E-value=3.7e-23  Score=155.70  Aligned_cols=88  Identities=17%  Similarity=0.136  Sum_probs=75.7

Q ss_pred             cCCCCceeeecCCccCCCccCCC--------CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHH
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGR--------NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIK   71 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R--------~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~   71 (96)
                      .|+|+++...++++   .|+++|        .|+.|||||||||+.|...+.     ++.|+|+.|+|||||+||++|++
T Consensus       104 ~NPDG~~~~~~~~~---~wr~~R~~~~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~al~~~~~  180 (312)
T 2c1c_A          104 VNPDGYKYTFTNER---FWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVVRDILH  180 (312)
T ss_dssp             SCHHHHHHHHHTCT---TCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHH
T ss_pred             ccCccceeeecccc---cccccCCCCCCCccccccCCCcccCCCcCCCCCCCCCCCCccccCCCCCCCCHHHHHHHHHHH
Confidence            46777777766653   478888        469999999999999986432     37899999999999999999999


Q ss_pred             hC--CceEEEEeccCCceEEeeCCCC
Q psy17408         72 NN--PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        72 ~~--~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +.  +++++++||+++++++|||+++
T Consensus       181 ~~~~~~~~~idlHs~~~~~~~P~~~~  206 (312)
T 2c1c_A          181 EHLARMALYLTMHSFGSMILYPWGHD  206 (312)
T ss_dssp             HHGGGEEEEEEEEESSSEEEESCTTT
T ss_pred             hccCCeeEEEEEecCCCeEEeCCCCC
Confidence            98  8999999999999999999974

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...

Probab=99.87  E-value=4.4e-23  Score=155.36  Aligned_cols=88  Identities=18%  Similarity=0.214  Sum_probs=74.5

Q ss_pred             cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...++++   .|+++|     .|+.|||||||||..|...+.     ++.|+|+.|+|||||+||++|++.. 
T Consensus       111 ~NPDG~~~~~~~~r---~wrk~r~~~~~~n~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~al~~~~~~~~  187 (307)
T 1m4l_A          111 TNPDGFAFTHSQNR---LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHG  187 (307)
T ss_dssp             SCHHHHHHHHHTCT---TCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             ccCccceeeecCCc---ceecCCCCCCCCcccCCCCCCCCCccCcCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhCC
Confidence            46777777666643   478876     489999999999999985432     3789999999999999999999776 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +++++++||+++++++|||+++
T Consensus       188 ~~~~~idlH~~~~~~~~P~~~~  209 (307)
T 1m4l_A          188 NFKAFLSIHSYSQLLLYPYGYT  209 (307)
T ss_dssp             CEEEEEEEEESSCEEEESCSSC
T ss_pred             CeEEEEEEecCCCEEEeCCCCC
Confidence            6999999999999999999875

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A

Probab=99.87  E-value=9e-23  Score=153.23  Aligned_cols=88  Identities=19%  Similarity=0.241  Sum_probs=74.6

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCC-CCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPD-QFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~-~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++...+++   ..|+++|.     |+.|||||||||. .|...+.     ++.|+|+.|+|||||+||++|+++.
T Consensus       109 ~NPDG~~~~~~~~---~~wr~~R~~~~~~~~~GvDLNRnf~~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~  185 (309)
T 3d4u_A          109 VNVDGYDYTWKKD---RMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVADFLRRN  185 (309)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred             eccchhheeeccc---ceeecCCCCCCCCCCcCccccCCCChhhcCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhc
Confidence            4666666665554   35888886     5999999999999 9975432     3799999999999999999999998


Q ss_pred             --CceEEEEeccCCceEEeeCCCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                        ++++++++|+++++++|||+++
T Consensus       186 ~~~~~~~idlH~~~~~~~~Py~~~  209 (309)
T 3d4u_A          186 IKHIKAYISMHSYSQKIVFPYSYS  209 (309)
T ss_dssp             TTTEEEEEEEEESSSEEEESCSSC
T ss_pred             ccceEEEEEEeCCCcEEEeCCCCC
Confidence              6999999999999999999874

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*

Probab=99.85  E-value=2.1e-22  Score=151.35  Aligned_cols=88  Identities=19%  Similarity=0.191  Sum_probs=73.8

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   ..|+++|.     |+.|||||||||..|...+.     ++.|+|+.|+|||||+||++|++.. 
T Consensus       110 ~NPDG~~~~~~~~---r~wr~~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~sepEt~a~~~~~~~~~  186 (308)
T 2bo9_A          110 ANPDGYVYTQTQN---RLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG  186 (308)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             ccCccceeeeccc---cceecCCCCCCCCCccCCcCCCCCccccCCCCCCCCCCccccCCCCCCCCHHHHHHHHHHHhCC
Confidence            4677777766654   34788886     49999999999999985432     3799999999999999999999554 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++++++|+++++++|||+++
T Consensus       187 ~~~~~idlHs~~~~~~~P~~~~  208 (308)
T 2bo9_A          187 NFKGFIDLHSYSQLLMYPYGYS  208 (308)
T ss_dssp             CEEEEEEEEESSSEEEESCSSC
T ss_pred             CeEEEEEEecCCcEEEeCCCCC
Confidence            5999999999999999999975

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1

Probab=99.85  E-value=2.8e-22  Score=156.47  Aligned_cols=88  Identities=19%  Similarity=0.191  Sum_probs=74.2

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   ..|+++|.     ||.|||||||||..|...+.     ++.|+|+.|+|||||+||++|++.. 
T Consensus       206 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~pc~e~y~G~~~~sepEt~al~~~~~~~~  282 (404)
T 2boa_A          206 ANPDGYVYTQTQN---RLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG  282 (404)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTSSCBCCCGGGCSSSSTTCTTCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             ecCcchhhccccc---ceeecCCCCCCCCCCccccccCCCCccccCCCCCCCCCccccCCCCCCCCHHHHHHHHHHHcCC
Confidence            4677777766654   35888886     69999999999999985432     3799999999999999999999544 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++++++|+++++++|||+++
T Consensus       283 ~~~~~idlHs~~~~~l~Py~~~  304 (404)
T 2boa_A          283 NFKGFIDLHSYSQLLMYPYGYS  304 (404)
T ss_dssp             CEEEEEEEEESSCEEEESCSSC
T ss_pred             CEEEEEEEeCCCCEEEeccCCC
Confidence            4999999999999999999976

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A

Probab=99.85  E-value=4.1e-23  Score=161.41  Aligned_cols=88  Identities=18%  Similarity=0.172  Sum_probs=0.0

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-----CCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-----NANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-----N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++...+++   .+|+++|.     ||.|||||||||..|...+.     ++.|+|+.|+|||||+||++|++.. 
T Consensus       206 ~NPDG~~~~~~~~---r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~pc~~~y~G~~~~sepEt~al~~~~~~~~  282 (403)
T 1pca_A          206 TNPNGFAFTHSDN---RLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNSEVEVKSITDFVKNNG  282 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ecCCcceecccCc---cceeccCCCCCCCcccCcccccCCccccccCCCCCCCcccccCCCCCCCcHHHHHHHHHHHhcC
Confidence            5788888876664   35888774     79999999999999985432     3799999999999999999999666 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++++++|+++++++|||+++
T Consensus       283 ~~~~~idlHs~~~~~~yPy~~~  304 (403)
T 1pca_A          283 NIKAFISIHSYSQLLLYPYGYK  304 (403)
T ss_dssp             ----------------------
T ss_pred             CeEEEEEEcCCCCeEEeCCCCC
Confidence            5999999999999999999875

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1

Probab=99.85  E-value=6.8e-22  Score=155.69  Aligned_cols=86  Identities=21%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             cCCCCceeeecCCccCCCccCCCC-------CCCCcCCCCCCCCCCCCCC---C-CCCCCCCCCCCcHHHHHHHHHHHhC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRN-------NANGVDLNRNFPDQFDSSS---E-RREQPLNVKKLEPETLAMISFIKNN   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~-------N~~GVDLNRNFp~~w~~~~---~-~~~y~G~~p~SEpEt~Av~~~~~~~   73 (96)
                      .|+|+++...+++   ..|+++|.       ||.|||||||||+.|...+   . ++.|+|+.|+|||||+||++|+.+.
T Consensus       219 ~NPDG~~~~~~~~---r~wrk~R~~~~~~~~~~~GvDLNRnf~~~w~~~Gs~~pc~e~y~G~~~~sepEt~al~~~~~~~  295 (433)
T 1jqg_A          219 ANPDGYVHTFGGD---RYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSVIRDIIAEH  295 (433)
T ss_dssp             SCHHHHHHHHSSC---TTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHT
T ss_pred             ecCccchhcccCc---cccccCCCCCCCCCCCCcCcccccCCccccCCCCCCCCcccccCCCCCCccHHHHHHHHHHHHh
Confidence            4677777776664   45899987       4999999999999998543   2 3789999999999999999999998


Q ss_pred             --CceEEEEeccCCceEEeeCC
Q psy17408         74 --PFVLSGNLHGGAIVASYPFD   93 (96)
Q Consensus        74 --~~~l~is~Hsg~~~i~yPy~   93 (96)
                        ++++++++|+++++++|||+
T Consensus       296 ~~~~~~~idlHs~~~~~~~Py~  317 (433)
T 1jqg_A          296 RNRMALYLDIHSFGSMILYGYG  317 (433)
T ss_dssp             TTTEEEEEEEEESSSEEEESCT
T ss_pred             cCCeEEEEEEcCCCCEEEeCCC
Confidence              89999999999999999998

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*

Probab=99.83  E-value=2.2e-21  Score=149.63  Aligned_cols=79  Identities=52%  Similarity=0.817  Sum_probs=70.0

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      .|+|+++...++++   .|+++|.|+.|||||||||..|...         ...|||||+||++|+++.+++++++||++
T Consensus       113 ~NPDG~~~~~~~~~---~w~k~R~n~~GvDLNRnf~~~~~~~---------~~~sepEt~a~~~~~~~~~~~~~idlH~~  180 (380)
T 1h8l_A          113 MNPDGYEKSQEGDR---GGTVGRNNSNNYDLNRNFPDQFFQV---------TDPPQPETLAVMSWLKTYPFVLSANLHGG  180 (380)
T ss_dssp             SCHHHHHTCCTTCS---SCCTTTSCTTSCCGGGCSCCSSSCC---------CSCCCHHHHHHHHHHHHSCEEEEEEEECS
T ss_pred             cCCccceecccCCC---CccCCCCCCCCCcccCCCccccccc---------CCCCChHHHHHHHHHHhCCceEEEEEecC
Confidence            47788888877764   5899999999999999999999742         23499999999999999999999999999


Q ss_pred             CceEEeeCCCC
Q psy17408         85 AIVASYPFDDS   95 (96)
Q Consensus        85 ~~~i~yPy~~s   95 (96)
                      +++++|||+++
T Consensus       181 ~~~~~~py~~~  191 (380)
T 1h8l_A          181 SLVVNYPFDDD  191 (380)
T ss_dssp             EEEEEESCSCC
T ss_pred             CEEEEecCCCC
Confidence            99999999975

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}

Probab=99.83  E-value=5.2e-22  Score=155.88  Aligned_cols=88  Identities=45%  Similarity=0.683  Sum_probs=71.1

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCC----CCCC-----CC---C-CCCCCCCCCCCcHHHHHHHHHHH
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPD----QFDS-----SS---E-RREQPLNVKKLEPETLAMISFIK   71 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~----~w~~-----~~---~-~~~y~G~~p~SEpEt~Av~~~~~   71 (96)
                      .|+|+++.+..+.....+|+++|.|++|||||||||+    .|..     ..   . ++.|.|+   |||||+||++|++
T Consensus       110 ~NPDG~~~~~~~~~~~~~wr~~R~n~~GvDLNRnf~~~~~~~w~~~~~g~~~~~~p~~~~y~g~---sepEt~al~~~~~  186 (439)
T 2nsm_A          110 MNPDGYEVAAAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQ---VEPETRAVIRWMH  186 (439)
T ss_dssp             SCHHHHHHHHHTTTTCCTTTTTCSCTTSCCGGGCSCCCHHHHHHHHHHCCCCSCCCCCTTHHHH---SCHHHHHHHHHHH
T ss_pred             cCCChHHhhcccCCccCcccCCccCCCCCcccccCcccchhhccccccCCcccCCCCccccCCC---CCHHHHHHHHHHH
Confidence            4778887765543344679999999999999999999    4421     10   1 2455553   9999999999999


Q ss_pred             hCCceEEEEeccCCceEEeeCCCC
Q psy17408         72 NNPFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        72 ~~~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +++|++++++|+++++++|||+++
T Consensus       187 ~~~~~~~idlHs~~~~~~yPy~~~  210 (439)
T 2nsm_A          187 SFNFVLSANLHGGAVVANYPYDKS  210 (439)
T ss_dssp             HSCEEEEEEEECSEEEEEESCCSC
T ss_pred             hCCcEEEEEcccCCEEEEecCCCC
Confidence            999999999999999999999985

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1

Probab=99.81  E-value=9.3e-21  Score=148.57  Aligned_cols=79  Identities=47%  Similarity=0.753  Sum_probs=70.6

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      .|+|+++.+.++++.   |+.+|.|+.|||||||||..|..         ..|++||||+||++|+++.++++++++|++
T Consensus       108 ~NPDG~~~~~~~~~~---w~~~R~n~~GvDLNRnf~~~w~~---------~~~~sepEt~al~~~~~~~~~~~~idlHs~  175 (426)
T 1uwy_A          108 MNPDGFEAVKKPDCY---YSIGRENYNQYDLNRNFPDAFEY---------NNVSRQPETVAVMKWLKTETFVLSANLHGG  175 (426)
T ss_dssp             SCHHHHHHCSSCCSS---CCSCSSCTTSCCTTSCSCCSSSC---------CCCCCCHHHHHHHHHHHHSCEEECCEEECS
T ss_pred             eccchhheeeccCcc---cCCCCCCCcCCCCCCCCCCCCCc---------CCccccHHHHHHHHHHhccCeEEEEEEcCC
Confidence            478888888777643   78999999999999999999963         257899999999999999999999999999


Q ss_pred             CceEEeeCCCC
Q psy17408         85 AIVASYPFDDS   95 (96)
Q Consensus        85 ~~~i~yPy~~s   95 (96)
                      +++++|||+++
T Consensus       176 ~~~~~~Py~~~  186 (426)
T 1uwy_A          176 ALVASYPFDNG  186 (426)
T ss_dssp             EEEEEESCSSC
T ss_pred             CeEEEccCCCC
Confidence            99999999986

>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}

Probab=99.68  E-value=3e-17  Score=119.53  Aligned_cols=71  Identities=31%  Similarity=0.406  Sum_probs=61.3

Q ss_pred             cCCCCCCCCcCCCCCCCCC-CCCC---------C---CCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEe
Q psy17408         24 FVGRNNANGVDLNRNFPDQ-FDSS---------S---ERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASY   90 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~-w~~~---------~---~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~y   90 (96)
                      +..|.|++|||||||||.. |...         .   .+..|+|+.|+|||||+||++++.+.++.+++++|++++++.|
T Consensus        92 ~~~r~~~~g~dlNR~fp~~~~~~~~~~~~~~~~~~~~~~~~y~G~~~~sePEt~Al~~~i~~~~~~~~islHs~~~~i~~  171 (243)
T 4axv_A           92 LGTRANANQVDLNRAFPTQNWTEHGTVYRWSSHTPVRDVKVKTGDKEQLEPEVDALISLIELRRPKFVVSFHEPLAFVDD  171 (243)
T ss_dssp             TTCSSCTTSBCGGGCSCCTTCCSCCEEECSSTTCSSCCEEEBCCBTTBCCHHHHHHHHHHHHHCCSCEEEEECSSCEEEC
T ss_pred             hccccCCCCCChhhcCCCCCccccccccccccCCCCCChhhcCCCCCcCCHHHHHHHHHHHhhCCcEEEEecCCcccccC
Confidence            5689999999999999975 3221         1   1257999999999999999999999999999999999999999


Q ss_pred             eCCC
Q psy17408         91 PFDD   94 (96)
Q Consensus        91 Py~~   94 (96)
                      |++.
T Consensus       172 p~~~  175 (243)
T 4axv_A          172 PAHS  175 (243)
T ss_dssp             SSSC
T ss_pred             Ccch
Confidence            9864

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*

Probab=99.49  E-value=3.3e-15  Score=111.53  Aligned_cols=61  Identities=16%  Similarity=0.049  Sum_probs=45.8

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH-------HHHHHHHHhCCceEEEEeccC-CceEEeeCCCC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET-------LAMISFIKNNPFVLSGNLHGG-AIVASYPFDDS   95 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt-------~Av~~~~~~~~~~l~is~Hsg-~~~i~yPy~~s   95 (96)
                      +++|.|+.|||||||||..|           +.|+|||||       +|+++|+++.++++++++|++ +....|+|+++
T Consensus       116 ~~~R~n~~gvDLNRnf~~~~-----------~~~~sepEt~~l~~~~~a~~~~~~~~~~~~~id~H~~~~~~g~y~~~~~  184 (275)
T 3b2y_A          116 AGHRFNRFGENPNRGFTLEN-----------GKPTPNEHTSLEGKLLLEHAQLLCAASRDGILTCHEDVLMNETYVYSFE  184 (275)
T ss_dssp             TTSSSCTTSCCTTSCCCC--------------------CCCHHHHHHHTTHHHHHHHTTTEEEEEEEETTCSSBEEEEEC
T ss_pred             cCccCCCCCCccCcCCCCCC-----------CCCCCCCCccccchHHHHHHHHHHhcCCcEEEECCCCCcCCeEEecCCC
Confidence            56788999999999999987           357899999       999999999999999999998 55556777654

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}

Probab=99.46  E-value=1.4e-14  Score=107.23  Aligned_cols=65  Identities=17%  Similarity=0.016  Sum_probs=52.8

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh---CCceEEEEeccC---CceEEeeCCCC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN---NPFVLSGNLHGG---AIVASYPFDDS   95 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~---~~~~l~is~Hsg---~~~i~yPy~~s   95 (96)
                      +.+|.|+.|||||||||..|...       |..+.+||||+|+++|++.   .+++++++||++   .+.++|||+++
T Consensus       115 ~~~R~n~~g~DlNR~f~~~~~~~-------~~~~~~~pE~~a~~~~~~~~~~~~~~~~idlHs~~~~~~~~~~~~~~~  185 (275)
T 2qvp_A          115 KGHRFNELGENPNRGFFIENGKA-------KPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYTFEPS  185 (275)
T ss_dssp             HTCSSCTTSCCTTSCCEEETTEE-------ECCTTCCHHHHHHHHTHHHHHHHTTTCEEEEEEETTCSSBEEEEECSS
T ss_pred             cccccCCCCccCCCCCCcccccC-------CCCCCCcHHHHHHHHHHHHhccCCceEEEEecCCCCCCCeEEecCCCC
Confidence            45789999999999999877621       2334589999999999643   579999999998   58899999865

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}

Probab=99.46  E-value=2e-14  Score=112.35  Aligned_cols=54  Identities=24%  Similarity=0.301  Sum_probs=49.1

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD   94 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~   94 (96)
                      .+|.|+.|||||||||             |+.|+|||||+||++++++.+++++|++|++++   +||++
T Consensus       234 ~~R~n~~GvDLNRnf~-------------g~~~~sepEt~a~~~~l~~~~~~~~iDlHs~~~---~p~~f  287 (395)
T 3l2n_A          234 HLRTNAVGANLNREWQ-------------TPSLERSPEVYYVVNKMHETGVDLFYDVHGDEG---LPYVF  287 (395)
T ss_dssp             CSSCCTTSCCGGGCSS-------------SCCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSBE
T ss_pred             ccccccCCCCcccccC-------------CCCcCCCHHHHHHHHHHHhCCCcEEEEeccCCC---CCceE
Confidence            3689999999999998             467899999999999999999999999999999   48875

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}

Probab=99.45  E-value=2.5e-14  Score=112.09  Aligned_cols=54  Identities=28%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD   94 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~   94 (96)
                      .+|.|+.|||||||||             |+.|+|||||+||++++++.++++++++|++++   +||++
T Consensus       243 ~~R~n~~GvDLNRnf~-------------~~~~~sepEt~al~~~~~~~~~~~~iDlHs~~~---~P~~f  296 (403)
T 3k2k_A          243 NLRTNAAGANLNREWM-------------EPDAERSPEVLVVRDAIHAIGCDLFFDIHGDED---LPYVF  296 (403)
T ss_dssp             CSSCCTTSCCGGGCSS-------------SCCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CCSBE
T ss_pred             ccccCCCCCCcccccc-------------cCCcCCCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCcc
Confidence            4689999999999998             367899999999999999999999999999999   58875

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*

Probab=99.41  E-value=9.7e-14  Score=108.06  Aligned_cols=54  Identities=28%  Similarity=0.283  Sum_probs=49.3

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccCCceEEeeCCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD   94 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg~~~i~yPy~~   94 (96)
                      .+|.|+.|||||||||.             +.+++||||+||++++++.++++++++|++++   +||++
T Consensus       229 ~~R~n~~GvDLNRnf~~-------------~~~~s~pEt~al~~~~~~~~~~~~iDlHs~~~---~p~~~  282 (388)
T 4a37_A          229 NLRTNAAGQDLNRAWLE-------------PSAERSPEVWFVQQEMKRHGVDLFLDIHGDEE---IPHVF  282 (388)
T ss_dssp             CSSCCTTSCCGGGCSSS-------------CCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSCE
T ss_pred             CCcccCCCcCCCCCCCC-------------CCcccCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCeE
Confidence            36899999999999984             57889999999999999999999999999999   68875

>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*

Probab=98.75  E-value=2.3e-09  Score=82.87  Aligned_cols=69  Identities=17%  Similarity=0.125  Sum_probs=53.9

Q ss_pred             CccCCCCCC-CCcCCCCCCCCCCCC----------CC--------------C-CCCCCCCCCCCcHHHHHHHHHHHhC--
Q psy17408         22 ARFVGRNNA-NGVDLNRNFPDQFDS----------SS--------------E-RREQPLNVKKLEPETLAMISFIKNN--   73 (96)
Q Consensus        22 ~w~~~R~N~-~GVDLNRNFp~~w~~----------~~--------------~-~~~y~G~~p~SEpEt~Av~~~~~~~--   73 (96)
                      +|..+|.++ .|+|||||||.....          ..              . ...++  .|+|++|+++++..+.+.  
T Consensus        86 ~~~~~R~~~~d~~DLNR~Fpg~~~~ia~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~l~~l~~  163 (368)
T 3fmc_A           86 EFTLGRFDPITGVNWNREYLDHGFNIEVWYQEHSHLDDDTLITAFRATLVEECARRLN--NPWGVTTGHRLAVTLQSMAH  163 (368)
T ss_dssp             TEECCSBCTTTCCBGGGCCCCCCSCHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT--CTTCCCHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCCCCCCCCCCCccccchhhhhccCCchhhhHHHHHHHHHHHHHhhhc--cccCccHHHHHHHHHHHHhc
Confidence            477889887 999999999987541          10              0 12333  689999999999999875  


Q ss_pred             CceEEEEeccCCceEEeeC
Q psy17408         74 PFVLSGNLHGGAIVASYPF   92 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy   92 (96)
                      +.+++|+||+++..+.+.|
T Consensus       164 ~aD~~iDLHs~~~~~~~~~  182 (368)
T 3fmc_A          164 RADIVLDLHTGPKSCKHLY  182 (368)
T ss_dssp             TCSEEEEEEEESEECEEEE
T ss_pred             cCCEEEEeccCCccccccc
Confidence            6899999999999877665

>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}

Probab=98.30  E-value=8.8e-07  Score=66.88  Aligned_cols=56  Identities=20%  Similarity=0.081  Sum_probs=40.4

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CceEEEEeccCCc-eEEeeCC
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAI-VASYPFD   93 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~--~~~l~is~Hsg~~-~i~yPy~   93 (96)
                      ...|.|+ .|+|||||||..              +..++|.+....+++..  +++++|+||+++. +.++||.
T Consensus        94 ~~~R~~~~~~~DLNR~f~~~--------------~~g~~e~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~  153 (332)
T 2qj8_A           94 AWTRNTPIDGKNLNRVFPGR--------------SDGSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSI  153 (332)
T ss_dssp             HTCSSCTTTCCCTTTTTTCC--------------TTSCHHHHHHHHHHHHTGGGCSEEEEEEEEETTEEECSEE
T ss_pred             hCcCCCccCCCcccccCCCC--------------CCCCHHHHHHHHHHHhhhhcCCEEEECCCCCCcCCcCcEE
Confidence            3578785 999999999852              22467877776666654  5889999999973 4555553

>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}

Probab=98.14  E-value=2.6e-06  Score=65.01  Aligned_cols=55  Identities=18%  Similarity=0.114  Sum_probs=36.0

Q ss_pred             CCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CceEEEEeccCCceEEe-eCC
Q psy17408         25 VGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAIVASY-PFD   93 (96)
Q Consensus        25 ~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~--~~~l~is~Hsg~~~i~y-Py~   93 (96)
                      ..|.|+ .|+|||||||...              ..++|.+....+++..  ++.+.|+||++++...| ||.
T Consensus       103 ~~R~~~~~~~DLNR~f~~~~--------------~g~~~~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~  161 (354)
T 3cdx_A          103 DTRLSPVDGRDINRCFPGDP--------------RGTFSQMLAHFLDSVILPMADISVDMHTAGHSYDSTPST  161 (354)
T ss_dssp             TCSSCTTTCCCGGGSTTCCT--------------TSCHHHHHHHHHHHTTGGGCSEEEEECCCTTTEEECSEE
T ss_pred             hCCCCCCCCccccccCCCCC--------------CCCHHHHHHHHHHHHHHhcCCEEEEcCCCCCccccCCEE
Confidence            467776 8999999998632              1244444333333332  68899999999876544 553

>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}

Probab=97.09  E-value=0.00084  Score=50.81  Aligned_cols=48  Identities=19%  Similarity=0.314  Sum_probs=31.4

Q ss_pred             cCCCCCC-CCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-hC--CceEEEEeccCCc
Q psy17408         24 FVGRNNA-NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIK-NN--PFVLSGNLHGGAI   86 (96)
Q Consensus        24 ~~~R~N~-~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~-~~--~~~l~is~Hsg~~   86 (96)
                      ...|.|+ .|+||||+||....             .+..|  .++..+. ..  +..+.|.||+++.
T Consensus        98 ~~~R~~~~~~~DLNR~Fp~~~~-------------g~~~~--~~a~~~~~~~~~~~d~~iDLH~~~~  149 (331)
T 3na6_A           98 ASARTSPIDRGNLNRAFPGRPD-------------GTVTQ--KIADYFQRTLLPMADVAVDFHSGGK  149 (331)
T ss_dssp             TTSSSCTTTCCCGGGCTTCCTT-------------SCHHH--HHHHHHHHTTGGGCSEEEECCCCCT
T ss_pred             hCcccCCCCCCchHhhCCCCCC-------------CCHHH--HHHHHHHHhhhhcCCEEEEcCCCCC
Confidence            4568888 99999999986321             12223  3333333 22  4789999999875

>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7

Probab=96.44  E-value=0.0043  Score=46.86  Aligned_cols=51  Identities=16%  Similarity=0.150  Sum_probs=30.3

Q ss_pred             cCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHh------CCceEEEEeccCC
Q psy17408         24 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP-ETLAMISFIKN------NPFVLSGNLHGGA   85 (96)
Q Consensus        24 ~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEp-Et~Av~~~~~~------~~~~l~is~Hsg~   85 (96)
                      ...|.+  ++||||+||..+...         ...+|. ++++|.+++.+      ....+.|+||++.
T Consensus        98 ~~~R~~--~~DLNR~Fpg~~~~~---------~~~~e~~rA~~l~~~~~~~~~~~~~~~d~~iDlHs~~  155 (335)
T 1yw6_A           98 QGKRYC--HSDMNRMFGGRWQLF---------AESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAI  155 (335)
T ss_dssp             SCCC-----CCSTTSSSSSSCCS---------SCCHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCS
T ss_pred             hCCCCC--CCCcccccCCccccC---------CCChHHHHHHHHHHHHHHHhhcccccceEEEECCCCC
Confidence            345655  689999999654321         011232 35666665554      3578999999874

>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A

Probab=95.16  E-value=0.0065  Score=45.51  Aligned_cols=51  Identities=22%  Similarity=0.092  Sum_probs=32.1

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-------CceEEEEeccC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-------PFVLSGNLHGG   84 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~-------~~~l~is~Hsg   84 (96)
                      ..|.  .++||||.||....+.  +     ....+.+|.+....+++..       +..+.|+||++
T Consensus        60 ~~R~--~~~DLNR~Fpg~~~g~--~-----~~~~~~~e~r~A~~l~~~~~~~~~~~~~d~~iDLHs~  117 (312)
T 2gu2_A           60 CTRY--IDCDLNRVFDLENLSK--E-----MSEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNT  117 (312)
T ss_dssp             TSSC--SSSCGGGCCSHHHHTC--C-----CCTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred             CCCC--cCCCcccCCCCcccCC--c-----cccCCCHHHHHHHHHHHHHhhhccCcCceEEEECCCC
Confidence            3454  7999999998532111  0     0112377776665555542       67899999996

>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A

Probab=94.84  E-value=0.03  Score=42.51  Aligned_cols=46  Identities=20%  Similarity=0.099  Sum_probs=27.4

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHH------HHHHHHhC--CceEE-EEeccCC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLA------MISFIKNN--PFVLS-GNLHGGA   85 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~A------v~~~~~~~--~~~l~-is~Hsg~   85 (96)
                      ..|.+  ++||||.||..+.         |    +.+|++.      ++..+.+.  +..+. |.+|++.
T Consensus       104 ~~R~~--~~DLNR~Fpg~~~---------g----~~~~~~Ra~~l~~~a~~~~~~~~~~d~~~iDLHt~~  158 (350)
T 2bco_A          104 HTRFL--EENLNRLFDEKEH---------E----PTKELAIADTLKLLVRDFYQDTEPKTRWHLDLHCAI  158 (350)
T ss_dssp             TSSCS--SSCGGGCSSSSCC---------C----CCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEES
T ss_pred             CCccC--CCCCCCCCCCCCC---------C----CchHHHHHHHHHHHHHHHHhccCCCcEEEEECccCC
Confidence            44555  9999999996432         1    2445553      33333332  34566 8999764

>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7

Probab=94.32  E-value=0.027  Score=42.62  Aligned_cols=49  Identities=20%  Similarity=0.180  Sum_probs=31.4

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHH---HHHHHHHHHh-----CCceEEEEeccCCc
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE---TLAMISFIKN-----NPFVLSGNLHGGAI   86 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpE---t~Av~~~~~~-----~~~~l~is~Hsg~~   86 (96)
                      ..|.  .++||||.||......           .+.+|   .+++...+.+     .+..+.|.||++..
T Consensus        97 ~~R~--~~~DlNR~Fpg~~~g~-----------~~~~e~~rA~~l~~~~~~~~~~~~~~d~~iDLH~~~~  153 (341)
T 1yw4_A           97 GVRY--GNYDMNRLFNGAHARH-----------PELPESVRAAELETLAAEFFAGARARKLHYDLHTAIR  153 (341)
T ss_dssp             TSSC--SSSCGGGSTTTGGGGC-----------TTCHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEEESS
T ss_pred             cCCC--CcCCcCcCCCcccccC-----------CCCHHHHHHHHHHHHHHHhcccCCCCcEEEECCCCCc
Confidence            3455  6899999999643221           11445   5556665553     26788999998753

>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*

Probab=89.96  E-value=0.2  Score=38.07  Aligned_cols=50  Identities=22%  Similarity=0.113  Sum_probs=28.8

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHhC-------CceEEEEeccC
Q psy17408         25 VGRNNANGVDLNRNFPDQFDSSSERREQPLNVK-KLEPETLAMISFIKNN-------PFVLSGNLHGG   84 (96)
Q Consensus        25 ~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p-~SEpEt~Av~~~~~~~-------~~~l~is~Hsg   84 (96)
                      ..|..  ..||||.||-.....        +.+ ....|.+.-..+.+..       ...+.|.||++
T Consensus        70 ~~R~~--~~DLNR~Fpg~~~~~--------~~~~~~s~e~r~A~~l~~~l~p~~~~~~~d~~iDLHs~  127 (327)
T 3nh4_A           70 CCRYL--DRDLNRSCTLTFLGS--------TATPDDPYEVKRARELNQLLGPKGTGQAFDFTLDLHNT  127 (327)
T ss_dssp             TSSCS--SSCGGGCCSHHHHTS--------CCCTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred             cCCCC--CCCcccCCCCccccc--------cCcCCCCHHHHHHHHHHHHhhhccCCcCCcEEEECcCC
Confidence            44554  589999998643221        011 1235654433333332       47899999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	96
d1uwya2	296	c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d	1e-09
d1jqga1	317	c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton boll	4e-09
d2c1ca1	312	c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earwor	1e-08
d1m4la_	307	c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus)	5e-08
d1ayea1	307	c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo	1e-07
d2bo9a1	305	c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo	1e-07
d1h8la2	301	c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d	1e-07
d1obra_	323	c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce	6e-06
d1z5ra1	304	c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus sc	1e-05

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-09
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 9/70 (12%)

Query: 26  GRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGA 85
           GR N N  DLNRNFPD F+ ++  R+          ET+A++ ++K   FVLS NLHGGA
Sbjct: 126 GRENYNQYDLNRNFPDAFEYNNVSRQP---------ETVAVMKWLKTETFVLSANLHGGA 176

Query: 86  IVASYPFDDS 95
           +VASYPFD+ 
Sbjct: 177 LVASYPFDNG 186

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]} Length = 317

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

 Score = 49.8 bits (118), Expect = 4e-09
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 6/89 (6%)

Query: 13  PYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK----KLEPETLAMIS 68
                 N    ++  N   GVDLNRNF   + ++S                EPE+  +  
Sbjct: 122 DRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSVIRD 181

Query: 69  FIKNN--PFVLSGNLHGGAIVASYPFDDS 95
            I  +     L  ++H    +  Y + + 
Sbjct: 182 IIAEHRNRMALYLDIHSFGSMILYGYGNG 210

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Length = 312

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 7/93 (7%)

Query: 10  NWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK-----LEPETL 64
               +     S           G D NRNF   ++S         ++        E ET 
Sbjct: 114 TNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETR 173

Query: 65  AMISFIKNNP--FVLSGNLHGGAIVASYPFDDS 95
            +   +  +     L   +H    +  YP+   
Sbjct: 174 VVRDILHEHLARMALYLTMHSFGSMILYPWGHD 206

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.3 bits (109), Expect = 5e-08
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 23  RFVGRNNANGVDLNRNFPDQFD-----SSSERREQPLNVKKLEPETLAMISFIKNN-PFV 76
                +   GVD NRN+   F      SS             E E  +++ F+K++  F 
Sbjct: 131 SVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHGNFK 190

Query: 77  LSGNLHGGAIVASYPFDDSK 96
              ++H  + +  YP+  + 
Sbjct: 191 AFLSIHSYSQLLLYPYGYTT 210

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-07
 Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 6/98 (6%)

Query: 5   CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSER-----REQPLNVKKL 59
            D                  V  +   GVD NRN+   F                     
Sbjct: 111 PDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANS 170

Query: 60  EPETLAMISFIKNNP-FVLSGNLHGGAIVASYPFDDSK 96
           E E  +++ FIK++        LH  + +  +P+    
Sbjct: 171 EVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKC 208

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 1e-07
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 26  GRNNANGVDLNRNFPDQFD-----SSSERREQPLNVKKLEPETLAMISFIKNNP-FVLSG 79
             ++  G D NRN+   F       +             E E  +++ FI+ +  F    
Sbjct: 132 PGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFI 191

Query: 80  NLHGGAIVASYPFDDS 95
           +LH  + +  YP+  S
Sbjct: 192 DLHSYSQLLMYPYGYS 207

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score = 45.3 bits (106), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 9/68 (13%)

Query: 28  NNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIV 87
           NN+N  DLNRNFPDQF   ++  +          ETLA++S++K  PFVLS NLHGG++V
Sbjct: 133 NNSNNYDLNRNFPDQFFQVTDPPQP---------ETLAVMSWLKTYPFVLSANLHGGSLV 183

Query: 88  ASYPFDDS 95
            +YPFDD 
Sbjct: 184 VNYPFDDD 191

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

 Score = 40.6 bits (94), Expect = 6e-06
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 12/86 (13%)

Query: 23  RFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV------KKLEPETLAMISFIKN---- 72
           +    ++  G DLNRN+  ++         P +           PET AM  FI +    
Sbjct: 133 QPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVG 192

Query: 73  --NPFVLSGNLHGGAIVASYPFDDSK 96
                      H  + +  YP+  + 
Sbjct: 193 GKQQIKTLITFHTYSELILYPYGYTY 218

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Length = 304

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 39.8 bits (92), Expect = 1e-05
 Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 7/76 (9%)

Query: 27  RNNANGVDLNRNFPDQFD-----SSSERREQPLNVKKLEPETLAMISFIKNNP--FVLSG 79
                G D NRNF   +      +         +  + E ET A+  FI+NN        
Sbjct: 130 GTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRNNLSSIKAYL 189

Query: 80  NLHGGAIVASYPFDDS 95
            +H  + +  YP+   
Sbjct: 190 TIHSYSQMILYPYSYD 205

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	96
d1jqga1	317	Carboxypeptidase A {Cotton bollworm (Helicoverpa a	99.9
d1obra_	323	Carboxypeptidase T {Thermoactinomyces vulgaris [Ta	99.9
d1m4la_	307	Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]	99.89
d1ayea1	307	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	99.89
d1uwya2	296	Carboxypeptidase M, catalytic domain {Human (Homo	99.89
d2c1ca1	312	Carboxypeptidase B {Corn earworm (Helicoverpa zea)	99.88
d1z5ra1	304	Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]	99.86
d1h8la2	301	Carboxypeptidase D, catalytic domain {Crested duck	99.86
d2bo9a1	305	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	99.82
d1yw4a1	331	Succinylglutamate desuccinylase AstE {Chromobacter	87.0
d1yw6a1	322	Succinylglutamate desuccinylase AstE {Escherichia	83.14

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

Probab=99.90  E-value=7.7e-25  Score=164.86  Aligned_cols=89  Identities=21%  Similarity=0.235  Sum_probs=74.6

Q ss_pred             ccCCCCceeeecCCccCCCccCCC-------CCCCCcCCCCCCCCCCCCCC---C-CCCCCCCCCCCcHHHHHHHHHHHh
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGR-------NNANGVDLNRNFPDQFDSSS---E-RREQPLNVKKLEPETLAMISFIKN   72 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R-------~N~~GVDLNRNFp~~w~~~~---~-~~~y~G~~p~SEpEt~Av~~~~~~   72 (96)
                      ..|+|+++...++++.   |+++|       .||+|||||||||..|+...   . .+.|+|+.|+|||||+||++++.+
T Consensus       109 ~~NPDG~~~~~~~~~~---~~knr~~~~~~~~~~~GVDLNRN~~~~w~~~~~~~p~~~~y~G~~p~SEpEt~al~~~~~~  185 (317)
T d1jqga1         109 VANPDGYVHTFGGDRY---WRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSVIRDIIAE  185 (317)
T ss_dssp             CSCHHHHHHHHSSCTT---CCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHH
T ss_pred             eEcchhceeeeccccc---cccCCCCCCCCCCcccCCccccCCCCCCCcccCCCCCccccCCCCccccHHHHHHHHHHHH
Confidence            3578888888777643   56554       46789999999999997542   2 378999999999999999999998


Q ss_pred             CC--ceEEEEeccCCceEEeeCCCC
Q psy17408         73 NP--FVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        73 ~~--~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++  |++++++||++++++|||+++
T Consensus       186 ~~~~i~~~vd~Hs~g~~i~yP~~~~  210 (317)
T d1jqga1         186 HRNRMALYLDIHSFGSMILYGYGNG  210 (317)
T ss_dssp             TTTTEEEEEEEEESSSEEEESCTTS
T ss_pred             hccceEEEEeeccCCceEEecCCCC
Confidence            74  888999999999999999875

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

Probab=99.90  E-value=1.7e-24  Score=162.39  Aligned_cols=91  Identities=19%  Similarity=0.183  Sum_probs=77.4

Q ss_pred             ccCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCC----C--CCCCCCCCCCCcHHHHHHHHHHHh
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSS----E--RREQPLNVKKLEPETLAMISFIKN   72 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~----~--~~~y~G~~p~SEpEt~Av~~~~~~   72 (96)
                      -+|+|+++++.+..+. ..|+++|     .++.|||||||||..|+..+    .  ++.|+|+.|+|||||+||++|+.+
T Consensus       110 ~~NPDG~~~~~~~~~~-~~~rknr~~~~~~~~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~~~SEPEt~a~~~~~~~  188 (323)
T d1obra_         110 NINPDGGEYDISSGSY-KSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINS  188 (323)
T ss_dssp             CSCHHHHHHTTTTSSC-CCCCSCCCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHT
T ss_pred             eechHHHhhhhccccc-ccccccccccCCCCccCcccccCCCccCCCCCCCCCCCCccccCCCCccchhHHHHHHHHHHH
Confidence            3678888888877654 4677776     46679999999999997542    1  379999999999999999999998


Q ss_pred             C------CceEEEEeccCCceEEeeCCCC
Q psy17408         73 N------PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        73 ~------~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +      +|.+++++||++++++|||+++
T Consensus       189 ~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~  217 (323)
T d1obra_         189 RVVGGKQQIKTLITFHTYSELILYPYGYT  217 (323)
T ss_dssp             TBCSSSBCEEEEEEEEESSSEEEESCCSC
T ss_pred             hccccccceeeEEEeccCCceEeecCcCC
Confidence            6      6999999999999999999875

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=1.5e-24  Score=162.27  Aligned_cols=88  Identities=18%  Similarity=0.214  Sum_probs=74.6

Q ss_pred             cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|+++++..+++   .|+++|     .||+|||||||||..|+..+.     .+.|+|+.|+|||||+||++|++++ 
T Consensus       111 ~NPDG~~~~~~~~~---~~rk~r~~~~~~~~~GvDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~sePEtral~~~l~~~~  187 (307)
T d1m4la_         111 TNPDGFAFTHSQNR---LWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVKSIVDFVKDHG  187 (307)
T ss_dssp             SCHHHHHHHHHTCT---TCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             cccccceeeecccc---ccccCCCCCCCCcccccccccCCCcCCccCCCCCCCCccCCCCCcccchHHHHHHHHHHHhcc
Confidence            47888888776653   366665     478899999999999976532     3789999999999999999999887 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +|++++++||++++++|||+++
T Consensus       188 ~~~~~i~~Hs~~~~i~~P~~~~  209 (307)
T d1m4la_         188 NFKAFLSIHSYSQLLLYPYGYT  209 (307)
T ss_dssp             CEEEEEEEEESSCEEEESCSSC
T ss_pred             ceeEEEEecCCCceEEecCCCC
Confidence            6999999999999999999975

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-24  Score=161.21  Aligned_cols=88  Identities=18%  Similarity=0.180  Sum_probs=74.9

Q ss_pred             cCCCCceeeecCCccCCCccCCCCC-----CCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNN-----ANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N-----~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|||+++++.+.++   .|+++|.+     |.|||||||||..|+..+.     .+.|+|+.|+|||||+||++|++++ 
T Consensus       109 ~NPDG~~~~~~~~~---~~r~~r~~~~~~~~~GVDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~sepEt~al~~~i~~~~  185 (307)
T d1ayea1         109 TNPDGYVFSQTKNR---MWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSIVDFIKSHG  185 (307)
T ss_dssp             SCHHHHHHHHHTCT---TCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             eccchhhheecccc---ccccCCcCCCCCcccccCcccCCCccCCCCCCCCCCCccccCCCCCCcHHHHHHHHHHHHhcC
Confidence            57888888877654   36777765     5699999999999986532     3689999999999999999999886 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++++++++||++++++|||+++
T Consensus       186 ~~~~~i~~Hs~~~~i~~P~~~~  207 (307)
T d1ayea1         186 KVKAFIILHSYSQLLMFPYGYK  207 (307)
T ss_dssp             CEEEEEEEEESSCEEEESCSSS
T ss_pred             ceEEEEEecCCCcEEEecCCCC
Confidence            6999999999999999999875

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.3e-24  Score=159.69  Aligned_cols=79  Identities=47%  Similarity=0.761  Sum_probs=71.2

Q ss_pred             cCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEeccC
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGG   84 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hsg   84 (96)
                      .|+|+++.+.++++.   |+++|.|++|||||||||..|.         |+.|+|||||+||++|+++++|++++++||+
T Consensus       108 ~NPDG~~~~~~~~~~---~~~~r~n~~GvDlNRNf~~~~~---------g~~~~sepEt~av~~~~~~~~~~~~i~~Hs~  175 (296)
T d1uwya2         108 MNPDGFEAVKKPDCY---YSIGRENYNQYDLNRNFPDAFE---------YNNVSRQPETVAVMKWLKTETFVLSANLHGG  175 (296)
T ss_dssp             SCHHHHHHCSSCCSS---CCSCSSCTTSCCTTSCSCCSSS---------CCCCCCCHHHHHHHHHHHHSCEEECCEEECS
T ss_pred             ecCchHhhccccccc---ccCccCCCccccCccccccccC---------CCccccHHHHHHHHHHHHhCCceEEEEecCC
Confidence            477888887777655   6899999999999999999875         5689999999999999999999999999999


Q ss_pred             CceEEeeCCCC
Q psy17408         85 AIVASYPFDDS   95 (96)
Q Consensus        85 ~~~i~yPy~~s   95 (96)
                      +++++|||+++
T Consensus       176 ~~~i~yP~~~~  186 (296)
T d1uwya2         176 ALVASYPFDNG  186 (296)
T ss_dssp             EEEEEESCSSC
T ss_pred             CeeEecCCCCC
Confidence            99999999975

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

Probab=99.88  E-value=5.8e-24  Score=159.62  Aligned_cols=88  Identities=17%  Similarity=0.149  Sum_probs=74.0

Q ss_pred             cCCCCceeeecCCccCCCccCCCCC--------CCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHH
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNN--------ANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIK   71 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N--------~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~   71 (96)
                      .|+|+++...+..+   .|+++|.+        |.|||||||||..|+..+.     .+.|+|+.|+|||||+||++|++
T Consensus       104 ~NPDG~~~~~~~~~---~~rk~r~~~~~~~~~~~~GvDlNRNf~~~w~~~~~s~~p~~~~y~G~~p~SepEt~av~~~~~  180 (312)
T d2c1ca1         104 VNPDGYKYTFTNER---FWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVVRDILH  180 (312)
T ss_dssp             SCHHHHHHHHHTCT---TCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHH
T ss_pred             eccchhhhhhhccc---ccccCCCCCCCCccccccccccccCCCCCcCCCCCCCCCCccccCCCCcccChHHHHHHHHHH
Confidence            47788877777654   36777753        5699999999999986532     37899999999999999999999


Q ss_pred             hC--CceEEEEeccCCceEEeeCCCC
Q psy17408         72 NN--PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        72 ~~--~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      ++  +|+++|++||++++++|||+++
T Consensus       181 ~~~~~i~~~l~~Hs~g~~i~~P~~~~  206 (312)
T d2c1ca1         181 EHLARMALYLTMHSFGSMILYPWGHD  206 (312)
T ss_dssp             HHGGGEEEEEEEEESSSEEEESCTTT
T ss_pred             hcccceeEEEEecCCCceEEecccCC
Confidence            86  5889999999999999999975

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.86  E-value=5.3e-23  Score=153.71  Aligned_cols=88  Identities=20%  Similarity=0.240  Sum_probs=74.4

Q ss_pred             cCCCCceeeecCCccCCCccCCCCC-----CCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGRNN-----ANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R~N-----~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      .|+|++++..+.+   ..|+++|.+     |.|||||||||..|...+.     .+.|+|+.|+|||||+||++|++++ 
T Consensus       106 ~NPDG~~~~~~~~---~~~rk~~~~~~~~~~~GvDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~SepEt~al~~~~~~~~  182 (304)
T d1z5ra1         106 LNIDGYIYTWTKN---RMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALADFIRNNL  182 (304)
T ss_dssp             SCHHHHHHHHHTC---TTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTT
T ss_pred             eccccchheeecc---ccccccCCCCCCCccccCCcccccCCCCCcCCCCCCCcccccCCCCccchHHHHHHHHHHHhcc
Confidence            4778888777765   347777764     4699999999999986532     3789999999999999999999986 


Q ss_pred             -CceEEEEeccCCceEEeeCCCC
Q psy17408         74 -PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 -~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                       +|+++|++|+++++++|||+++
T Consensus       183 ~~~~~~i~~Hs~g~~i~yP~~~~  205 (304)
T d1z5ra1         183 SSIKAYLTIHSYSQMILYPYSYD  205 (304)
T ss_dssp             TTEEEEEEEEESSSEEEESCSSS
T ss_pred             cccceEEecCCCCceEEecccCC
Confidence             5899999999999999999975

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=99.86  E-value=1.3e-22  Score=150.47  Aligned_cols=80  Identities=51%  Similarity=0.786  Sum_probs=71.3

Q ss_pred             ccCCCCceeeecCCccCCCccCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCceEEEEecc
Q psy17408          4 YCDCKSNWLPYEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG   83 (96)
Q Consensus         4 ~~~~~~~~~a~~~~~~~~~w~~~R~N~~GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~~~~~l~is~Hs   83 (96)
                      .+|+|+++...++++.   |..+|.|++|||||||||..|.         |+.++|||||+||++|+++++|++++++||
T Consensus       112 ~~NPDG~~~~~~~~~~---~~~~~~n~~gvDlNRnf~~~~~---------g~~~~sepEt~a~~~~~~~~~~~~~~~~Hs  179 (301)
T d1h8la2         112 SMNPDGYEKSQEGDRG---GTVGRNNSNNYDLNRNFPDQFF---------QVTDPPQPETLAVMSWLKTYPFVLSANLHG  179 (301)
T ss_dssp             CSCHHHHHTCCTTCSS---CCTTTSCTTSCCGGGCSCCSSS---------CCCSCCCHHHHHHHHHHHHSCEEEEEEEEC
T ss_pred             eeCCCHHHhccccccc---ccccCCCCccccCccccccccC---------CCCcccHHHHHHHHHHHhhcCceEEEEccC
Confidence            3678888877777644   6899999999999999999886         457899999999999999999999999999


Q ss_pred             CCceEEeeCCCC
Q psy17408         84 GAIVASYPFDDS   95 (96)
Q Consensus        84 g~~~i~yPy~~s   95 (96)
                      ++++++|||+++
T Consensus       180 ~~~~i~yP~~~~  191 (301)
T d1h8la2         180 GSLVVNYPFDDD  191 (301)
T ss_dssp             SEEEEEESCSCC
T ss_pred             CCcEEecCccCC
Confidence            999999999865

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.2e-21  Score=143.31  Aligned_cols=88  Identities=19%  Similarity=0.184  Sum_probs=73.2

Q ss_pred             cCCCCceeeecCCccCCCccCCC-----CCCCCcCCCCCCCCCCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHhC-
Q psy17408          5 CDCKSNWLPYEGSCNSLARFVGR-----NNANGVDLNRNFPDQFDSSSE-----RREQPLNVKKLEPETLAMISFIKNN-   73 (96)
Q Consensus         5 ~~~~~~~~a~~~~~~~~~w~~~R-----~N~~GVDLNRNFp~~w~~~~~-----~~~y~G~~p~SEpEt~Av~~~~~~~-   73 (96)
                      -|+|++.+..++.+.   |+++|     .|+.|||||||||..|.....     .+.|+|+.|+|||||+||++|++++ 
T Consensus       109 ~NPDG~~~~~~~~~~---~r~~~~~~~~~~~~GvDlNRn~~~~~~~~~~~~~p~~~~~~G~~~~sepEt~a~~~~~~~~~  185 (305)
T d2bo9a1         109 ANPDGYVYTQTQNRL---WRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVDFIQKHG  185 (305)
T ss_dssp             SCHHHHHHHHHTCTT---CCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCTTSTTBCCSSTTCSHHHHHHHHHHHHHC
T ss_pred             ccCchhhheeccccc---cccCCCCCCCCCccccccccccCccCCCCCCCCCCccccccCccccccHHHHHHHHHHhcCC
Confidence            367777777766543   45554     467899999999999986532     4799999999999999999999986 


Q ss_pred             CceEEEEeccCCceEEeeCCCC
Q psy17408         74 PFVLSGNLHGGAIVASYPFDDS   95 (96)
Q Consensus        74 ~~~l~is~Hsg~~~i~yPy~~s   95 (96)
                      +|.+++++||++++++|||+++
T Consensus       186 ~~~~~i~~Hs~~~~i~~p~~~~  207 (305)
T d2bo9a1         186 NFKGFIDLHSYSQLLMYPYGYS  207 (305)
T ss_dssp             CEEEEEEEEESSSEEEESCSSC
T ss_pred             ceeEEEEEecCCceEEecCCCC
Confidence            6999999999999999999875

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Chromobacterium violaceum [TaxId: 536]

Probab=87.00  E-value=0.17  Score=36.47  Aligned_cols=54  Identities=20%  Similarity=0.202  Sum_probs=30.2

Q ss_pred             CcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----C-CceEEEEeccC------CceEEeeCC
Q psy17408         32 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN----N-PFVLSGNLHGG------AIVASYPFD   93 (96)
Q Consensus        32 GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt~Av~~~~~~----~-~~~l~is~Hsg------~~~i~yPy~   93 (96)
                      -.||||-||-....        ++....+...+.|...+..    . ...+.|+|||.      .+++++|+-
T Consensus       101 d~DLNR~f~g~~~~--------~~~~~e~~rA~eL~~~v~~f~~~~~~~d~~lDLHS~~~~s~~~~f~~~p~~  165 (331)
T d1yw4a1         101 NYDMNRLFNGAHAR--------HPELPESVRAAELETLAAEFFAGARARKLHYDLHTAIRGSVFEKFAIYPFL  165 (331)
T ss_dssp             SSCGGGSTTTGGGG--------CTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEEESSCBSSSSEEEECCC
T ss_pred             CCcccccCCCcccc--------CcCCHHHHHHHHHHHHHHHHhccccccCEEEEccCCCCCCcCCceEEeccc
Confidence            45999999853321        1111112233344444433    2 46788999986      356788864

>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Escherichia coli [TaxId: 562]

Probab=83.14  E-value=0.68  Score=32.43  Aligned_cols=43  Identities=19%  Similarity=0.195  Sum_probs=23.8

Q ss_pred             CcCCCCCCCCCCCCCCCCCCCCCCCCCCcHHH---HHHHHHH----HhC--CceEEEEeccCC
Q psy17408         32 GVDLNRNFPDQFDSSSERREQPLNVKKLEPET---LAMISFI----KNN--PFVLSGNLHGGA   85 (96)
Q Consensus        32 GVDLNRNFp~~w~~~~~~~~y~G~~p~SEpEt---~Av~~~~----~~~--~~~l~is~Hsg~   85 (96)
                      -.||||-||-....         .  ...+|.   +.+...+    .+.  ...+.|.||+.+
T Consensus        99 d~DLNR~Fpg~~~~---------~--~~s~e~~rA~~l~~~~~~~~~~~~~~~d~~lDLHs~~  150 (322)
T d1yw6a1          99 HSDMNRMFGGRWQL---------F--AESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAI  150 (322)
T ss_dssp             -CCSTTSSSSSSCC---------S--SCCHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCS
T ss_pred             CCCHhhcCCCCcCC---------C--cCCHHHHHHHHHHHHHHHHHhcccccceEEEECCCCC
Confidence            46999999853321         1  122332   2333333    332  478899999874