Psyllid ID: psy17485

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MSPYLVSQPDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQNPQSFAQSVQVSRTRSPSPSLYRSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP
Secondary Structure (PSIPRED)
ccccccccccccccccHHcccccccccHHHHHHHHHHHcEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccHHHcccccccccHHHHHHHHcccEEEccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccHHccHHHHHHHHHHHHHHHHcHcHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
mspylvsqpdglstdrfwnvtldldsipVNFALLQLVGVKvskregdsSLMQLKEEFRTYESLRREHDAQIVEIATEAglriapdqwssllygdasrKSHMQSIIDKlqnpqsfaqsvqvsrtrspspslyrsvepavlrpvctvqgsnptsctlsrpmQRKLIGLINCQILEDEGRGRAMRAArsigpqskartphrtsigERAVTelnlqhqnpqQLSANLWAAVRARGCQFLGP
Flexible Loop (DISEMBL)
mspylvsqpdglsTDRFWNVTLDLDSIPVNFALLQLVGVKvskregdsslmqLKEEFRTYESLRREHDAQIVEIATeaglriapdqWSSLLYGDASRKSHMQSIIDKLQNPQSFAQsvqvsrtrspspslyrsvepavlrpvctvqgsnptsctlsrpmqrkLIGLINCQILEDEGRGRAMRAarsigpqskartphrtSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP
Low Complexity Region (SEG)
MSPYLVSQPDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQNPQSFAQSVQVSRTRSPSPSLYRSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP
Disordered region (IsUnstruct)
************STDRFWNVTLDLDSIPVNFALLQLVGVKVS****************TY**LRREHDAQIVEIATEAGLRIAPDQWSSLLYG*******************************************AVLRPVCTVQG****SCTLSRPMQRKLIGLINCQILE***********************************************ANLWAAVRARGCQF***
Disordered Region (DISOPRED)
**PYL**QPDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSK*E******QLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQN*********************RSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLG*
Disordered Region (DISEMBL)
********PDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQNP********************RSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEG**********************TSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP
Disordered Region (DISPRO)
*SPYLVSQPDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQNPQSFAQSVQVSRTRSPSPSLYRSVEPAVLRPVC*********CTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLG*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSPYLVSQPDGLSTDRFWNVTLDLDSIPVNFALLQLVGVKVSKREGDSSxxxxxxxxxxxxxxxxxxxxxIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDKLQNPQSFAQSVQVSRTRSPSPSLYRSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q6NUC6	1114	Probable E3 ubiquitin-pro	N/A	N/A	0.270	0.057	0.851	7e-34
Q4VGL6	1130	Probable E3 ubiquitin-pro	yes	N/A	0.270	0.056	0.851	8e-34
Q5TC82	1133	Probable E3 ubiquitin-pro	yes	N/A	0.270	0.056	0.851	8e-34
Q9HBD1	1191	RING finger and CCCH-type	no	N/A	0.278	0.055	0.812	2e-32
P0C090	1187	RING finger and CCCH-type	no	N/A	0.278	0.055	0.812	2e-32
O45962	952	Regulation of longevity b	no	N/A	0.278	0.069	0.737	1e-28

>sp|Q6NUC6|RC3H1_XENLA Probable E3 ubiquitin-protein ligase Roquin OS=Xenopus laevis GN=rc3h1 PE=2 SV=1

 Score =  144 bits (362), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 74/81 (91%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S K
Sbjct: 257 FKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHK 316

Query: 99  SHMQSIIDKLQNPQSFAQSVQ 119
           SHMQSIIDKLQ P SFAQSVQ
Sbjct: 317 SHMQSIIDKLQTPASFAQSVQ 337

Xenopus laevis (taxid: 8355)

>sp|Q4VGL6|RC3H1_MOUSE Probable E3 ubiquitin-protein ligase Roquin OS=Mus musculus GN=Rc3h1 PE=1 SV=1

 Score =  144 bits (362), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 74/81 (91%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S K
Sbjct: 255 FKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHK 314

Query: 99  SHMQSIIDKLQNPQSFAQSVQ 119
           SHMQSIIDKLQ P SFAQSVQ
Sbjct: 315 SHMQSIIDKLQTPASFAQSVQ 335

Represses ICOS function, an essential costimulatory receptor for follicular T-cells. May act as an ubiquitin ligase that regulates ubiquitin-dependent control of AU-rich mRNAs by AUF1/HNRPD and HUR/ELAVL1. Plays a central role in the prevention of production of autoantibodies by repressing follicular helper T-cells and germinal centers.

Mus musculus (taxid: 10090)

>sp|Q5TC82|RC3H1_HUMAN Probable E3 ubiquitin-protein ligase Roquin OS=Homo sapiens GN=RC3H1 PE=1 SV=1

 Score =  143 bits (361), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/81 (85%), Positives = 74/81 (91%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S K
Sbjct: 255 FKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHK 314

Query: 99  SHMQSIIDKLQNPQSFAQSVQ 119
           SHMQSIIDKLQ P SFAQSVQ
Sbjct: 315 SHMQSIIDKLQTPASFAQSVQ 335

Represses ICOS function, an essential costimulatory receptor for follicular T-cells. May act as an ubiquitin ligase that regulates ubiquitin-dependent control of AU-rich mRNAs by AUF1/HNRPD and HUR/ELAVL1.

Homo sapiens (taxid: 9606)

>sp|Q9HBD1|RC3H2_HUMAN RING finger and CCCH-type zinc finger domain-containing protein 2 OS=Homo sapiens GN=RC3H2 PE=1 SV=2

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 75/80 (93%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
           KV+KR+ DSSLMQLKEEFR+YE+LRREHDAQIV IA EAGLRI+P+QWSSLLYGD + KS
Sbjct: 253 KVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKS 312

Query: 100 HMQSIIDKLQNPQSFAQSVQ 119
           HMQSIIDKLQ+P+SFA+SVQ
Sbjct: 313 HMQSIIDKLQSPESFAKSVQ 332

Homo sapiens (taxid: 9606)

>sp|P0C090|RC3H2_MOUSE RING finger and CCCH-type zinc finger domain-containing protein 2 OS=Mus musculus GN=Rc3h2 PE=2 SV=1

 Score =  139 bits (349), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/80 (81%), Positives = 75/80 (93%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
           KV+KR+ DSSLMQLKEEFR+YE+LRREHDAQIV IA EAGLRI+P+QWSSLLYGD + KS
Sbjct: 253 KVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKS 312

Query: 100 HMQSIIDKLQNPQSFAQSVQ 119
           HMQSIIDKLQ+P+SFA+SVQ
Sbjct: 313 HMQSIIDKLQSPESFAKSVQ 332

Mus musculus (taxid: 10090)

>sp|O45962|RLE1_CAEEL Regulation of longevity by E3 ubiquitin-protein ligase OS=Caenorhabditis elegans GN=rle-1 PE=1 SV=4

 Score =  126 bits (316), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 69/80 (86%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
            V KR+G+SSLMQLKEEFRTYESLRREHD+QIV+IA E+GLRI PDQWS+LLY D S +S
Sbjct: 251 NVLKRDGESSLMQLKEEFRTYESLRREHDSQIVQIAFESGLRIGPDQWSALLYADQSHRS 310

Query: 100 HMQSIIDKLQNPQSFAQSVQ 119
           HMQSIIDKLQ+  S+ Q V+
Sbjct: 311 HMQSIIDKLQSKNSYQQGVE 330

E3 ubiquitin-protein ligase. Regulates the activity of daf-16 and is thereby involved in regulating aging and stress resistance.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
380019305	914	PREDICTED: roquin-like [Apis florea]	0.632	0.164	0.553	3e-38
328790387	909	PREDICTED: roquin isoform 2 [Apis mellif	0.632	0.165	0.553	3e-38
340715688	911	PREDICTED: RING finger and CCCH-type zin	0.632	0.164	0.540	1e-37
350417892	911	PREDICTED: roquin-like [Bombus impatiens	0.632	0.164	0.540	1e-37
383853048	916	PREDICTED: RING finger and CCCH-type zin	0.632	0.163	0.540	2e-37
345484383	921	PREDICTED: RING finger and CCCH-type zin	0.413	0.106	0.772	2e-36
307185948	991	Roquin [Camponotus floridanus]	0.413	0.098	0.762	5e-36
332022378	1028	Roquin [Acromyrmex echinatior]	0.409	0.094	0.77	5e-36
307204934	954	Roquin [Harpegnathos saltator]	0.409	0.101	0.77	6e-36
270012321	443	hypothetical protein TcasGA2_TC006458 [T	0.278	0.148	0.912	4e-35

>gi|380019305|ref|XP_003693550.1| PREDICTED: roquin-like [Apis florea]

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 106/159 (66%), Gaps = 9/159 (5%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD S K
Sbjct: 254 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTSHK 313

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP-----AVLRPVCTVQGSNP 150
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P     A + P    +    
Sbjct: 314 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLAAIDPSPETEPPTL 373

Query: 151 TSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGP 189
             C  +    R ++  +  + ++  G  +A     +IGP
Sbjct: 374 AECRAALEAVRTVVAAL-VEFIQQHGNRKAQDCTHNIGP 411

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790387|ref|XP_624874.2| PREDICTED: roquin isoform 2 [Apis mellifera]

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 106/159 (66%), Gaps = 9/159 (5%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD S K
Sbjct: 254 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTSHK 313

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP-----AVLRPVCTVQGSNP 150
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P     A + P    +    
Sbjct: 314 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLAAIDPSPETEPPTL 373

Query: 151 TSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGP 189
             C  +    R ++  +  + ++  G  +A     +IGP
Sbjct: 374 AECRAALEAVRTVVAAL-VEFIQQHGNRKAQDGTHNIGP 411

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715688|ref|XP_003396341.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing protein 2-like [Bombus terrestris]

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/159 (54%), Positives = 105/159 (66%), Gaps = 9/159 (5%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD S K
Sbjct: 254 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTSHK 313

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP-----AVLRPVCTVQGSNP 150
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P     A + P    +    
Sbjct: 314 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLAAIDPSPETEPPTL 373

Query: 151 TSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGP 189
             C  +    R ++  +  + ++  G  +      ++GP
Sbjct: 374 AECRAALEAVRTVVAAL-VEFIQQHGNRKTQDGTHNVGP 411

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417892|ref|XP_003491631.1| PREDICTED: roquin-like [Bombus impatiens]

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/159 (54%), Positives = 105/159 (66%), Gaps = 9/159 (5%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD S K
Sbjct: 254 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTSHK 313

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP-----AVLRPVCTVQGSNP 150
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P     A + P    +    
Sbjct: 314 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLAAIDPSPETEPPTL 373

Query: 151 TSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGP 189
             C  +    R ++  +  + ++  G  +      ++GP
Sbjct: 374 AECRAALEAVRTVVAAL-VEFIQQHGNRKTQDGTHNVGP 411

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853048|ref|XP_003702036.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing protein 2-like [Megachile rotundata]

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/159 (54%), Positives = 105/159 (66%), Gaps = 9/159 (5%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKR+GDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD S K
Sbjct: 254 FKVSKRDGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTSHK 313

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP-----AVLRPVCTVQGSNP 150
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P     A + P    +    
Sbjct: 314 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRPQLELLAAIDPSPETEPPTL 373

Query: 151 TSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGP 189
             C  +    R ++  +  + ++  G  +      S+GP
Sbjct: 374 AECRAALEAVRTVVAAL-VEFIQQHGNRKTQDGTHSVGP 411

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484383|ref|XP_001603217.2| PREDICTED: RING finger and CCCH-type zinc finger domain-containing protein 2-like isoform 1 [Nasonia vitripennis] gi|345484385|ref|XP_003425020.1| PREDICTED: RING finger and CCCH-type zinc finger domain-containing protein 2-like isoform 2 [Nasonia vitripennis]

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/101 (77%), Positives = 85/101 (84%), Gaps = 3/101 (2%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD   K
Sbjct: 255 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTGHK 314

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P    S+ P
Sbjct: 315 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSSLRP 355

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185948|gb|EFN71750.1| Roquin [Camponotus floridanus]

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/101 (76%), Positives = 85/101 (84%), Gaps = 3/101 (2%)

Query: 39  VKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRK 98
            KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD + K
Sbjct: 258 FKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTAHK 317

Query: 99  SHMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
           SHMQSIIDKLQ PQSFAQSVQ   ++  R+P P     + P
Sbjct: 318 SHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSGLRP 358

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022378|gb|EGI62690.1| Roquin [Acromyrmex echinatior]

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 85/100 (85%), Gaps = 3/100 (3%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
           KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD + KS
Sbjct: 307 KVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTAHKS 366

Query: 100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
           HMQSIIDKLQ PQSFAQSVQ   ++  R+P P     + P
Sbjct: 367 HMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSGLRP 406

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204934|gb|EFN83473.1| Roquin [Harpegnathos saltator]

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 85/100 (85%), Gaps = 3/100 (3%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
           KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD + KS
Sbjct: 257 KVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTAHKS 316

Query: 100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
           HMQSIIDKLQ PQSFAQSVQ   ++  R+P P     + P
Sbjct: 317 HMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQLSGLRP 356

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270012321|gb|EFA08769.1| hypothetical protein TcasGA2_TC006458 [Tribolium castaneum]

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/80 (91%), Positives = 77/80 (96%)

Query: 40  KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
           KVSKREGDSSLMQLKEEFRTYE+LRREHDAQIV+IATEAGLRIAPDQWS+LLYGD + KS
Sbjct: 254 KVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPDQWSALLYGDTAHKS 313

Query: 100 HMQSIIDKLQNPQSFAQSVQ 119
           HMQSIIDKLQ PQSFAQSVQ
Sbjct: 314 HMQSIIDKLQTPQSFAQSVQ 333

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
UNIPROTKB|F1NZ02	1183	RC3H2 "Uncharacterized protein	0.337	0.067	0.812	5.9e-34
FB|FBgn0036621	819	roq "roquin" [Drosophila melan	0.582	0.168	0.570	3.2e-32
UNIPROTKB|Q5TC82	1133	RC3H1 "Probable E3 ubiquitin-p	0.409	0.085	0.72	1.2e-31
UNIPROTKB|I3L965	199	I3L965 "Uncharacterized protei	0.358	0.427	0.62	2.3e-31
MGI|MGI:2685397	1130	Rc3h1 "RING CCCH (C3H) domains	0.409	0.085	0.72	9.2e-31
RGD|1563512	1130	Rc3h1 "ring finger and CCCH-ty	0.409	0.085	0.72	9.2e-31
UNIPROTKB|E2RGN7	1132	RC3H1 "Uncharacterized protein	0.409	0.085	0.72	9.3e-31
UNIPROTKB|E1BZI9	1132	RC3H1 "Uncharacterized protein	0.409	0.085	0.72	9.3e-31
UNIPROTKB|F1S727	1133	RC3H1 "Uncharacterized protein	0.409	0.085	0.72	9.3e-31
UNIPROTKB|J9P406	442	J9P406 "Uncharacterized protei	0.337	0.180	0.812	2.3e-30

UNIPROTKB|F1NZ02 RC3H2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 335 (123.0 bits), Expect = 5.9e-34, Sum P(2) = 5.9e-34
 Identities = 65/80 (81%), Positives = 75/80 (93%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFR+YE+LRREHDAQIV IA EAGLRI+P+QWSSLLYGD + KS
Sbjct:   245 KVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKS 304

Query:   100 HMQSIIDKLQNPQSFAQSVQ 119
             HMQSIIDKLQ+P+SFA+SVQ
Sbjct:   305 HMQSIIDKLQSPESFAKSVQ 324

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0036621 roq "roquin" [Drosophila melanogaster (taxid:7227)]

 Score = 362 (132.5 bits), Expect = 3.2e-32, P = 3.2e-32
 Identities = 85/149 (57%), Positives = 104/149 (69%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KVSKRE DSSLMQLKEEFRTY++LRREHDAQIV+IATEAGLRIAP+QWSSLLYGD   KS
Sbjct:   254 KVSKREADSSLMQLKEEFRTYDALRREHDAQIVQIATEAGLRIAPEQWSSLLYGDVMHKS 313

Query:   100 HMQSIIDKLQNPQSFAQSVQ-----VSRTRSPSP--SLYRSVEP-AVLRPVCTVQGSNPT 151
             HMQSIIDKLQ P SFAQSVQ     + RT  P+   SL+  ++  A + P   V   +  
Sbjct:   314 HMQSIIDKLQTPSSFAQSVQELVIALQRTSDPAKLSSLHHHLKYLANIDPCAEVAPWSVL 373

Query:   152 SCTLSRPMQRKLIGLINCQILEDEGRGRA 180
             +  L   ++  ++GL+N   L+  G  +A
Sbjct:   374 AEALDA-VRHSVVGLVN--FLQHHGVRKA 399

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5TC82 RC3H1 "Probable E3 ubiquitin-protein ligase Roquin" [Homo sapiens (taxid:9606)]

 Score = 351 (128.6 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=TAS

GO:0010494 "cytoplasmic stress granule" evidence=ISS

GO:0050856 "regulation of T cell receptor signaling pathway" evidence=ISS

GO:0002634 "regulation of germinal center formation" evidence=ISS

GO:0045623 "negative regulation of T-helper cell differentiation" evidence=ISS

GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS

GO:0003730 "mRNA 3'-UTR binding" evidence=ISS

GO:0046007 "negative regulation of activated T cell proliferation" evidence=ISS

GO:0043488 "regulation of mRNA stability" evidence=ISS

GO:0033962 "cytoplasmic mRNA processing body assembly" evidence=ISS

GO:0030889 "negative regulation of B cell proliferation" evidence=ISS

GO:0010608 "posttranscriptional regulation of gene expression" evidence=ISS

GO:0002635 "negative regulation of germinal center formation" evidence=ISS

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=ISS

UNIPROTKB|I3L965 I3L965 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 280 (103.6 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 62/100 (62%), Positives = 73/100 (73%)

Query:   139 LRPVCTVQG-SNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSIGPQSKARTPH 197
             L+P+   +G ++     LSRPMQRKL+ L+NCQ++E+EGR RAMRAARS+G         
Sbjct:   109 LKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLG--------- 159

Query:   198 RTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP 237
                  ER VTEL LQHQNPQQLSANLWAAVRARGCQFLGP
Sbjct:   160 -----ERTVTELILQHQNPQQLSANLWAAVRARGCQFLGP 194

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:2685397 Rc3h1 "RING CCCH (C3H) domains 1" [Mus musculus (taxid:10090)]

 Score = 351 (128.6 bits), Expect = 9.2e-31, P = 9.2e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=IMP

GO:0002634 "regulation of germinal center formation" evidence=IMP

GO:0002635 "negative regulation of germinal center formation" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0003730 "mRNA 3'-UTR binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IDA

GO:0010608 "posttranscriptional regulation of gene expression" evidence=IMP

GO:0016874 "ligase activity" evidence=IEA

GO:0030889 "negative regulation of B cell proliferation" evidence=IMP

GO:0033962 "cytoplasmic mRNA processing body assembly" evidence=IMP

GO:0043488 "regulation of mRNA stability" evidence=IMP

GO:0045623 "negative regulation of T-helper cell differentiation" evidence=IMP

GO:0046007 "negative regulation of activated T cell proliferation" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0050856 "regulation of T cell receptor signaling pathway" evidence=IMP

RGD|1563512 Rc3h1 "ring finger and CCCH-type domains 1" [Rattus norvegicus (taxid:10116)]

 Score = 351 (128.6 bits), Expect = 9.2e-31, P = 9.2e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=ISO

GO:0002634 "regulation of germinal center formation" evidence=ISO

GO:0002635 "negative regulation of germinal center formation" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003730 "mRNA 3'-UTR binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=ISO

GO:0010608 "posttranscriptional regulation of gene expression" evidence=ISO

GO:0030889 "negative regulation of B cell proliferation" evidence=ISO

GO:0033962 "cytoplasmic mRNA processing body assembly" evidence=ISO

GO:0043488 "regulation of mRNA stability" evidence=ISO

GO:0045623 "negative regulation of T-helper cell differentiation" evidence=ISO

GO:0046007 "negative regulation of activated T cell proliferation" evidence=ISO

GO:0050856 "regulation of T cell receptor signaling pathway" evidence=ISO

UNIPROTKB|E2RGN7 RC3H1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 351 (128.6 bits), Expect = 9.3e-31, P = 9.3e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E1BZI9 RC3H1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 9.3e-31, P = 9.3e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=IEA

GO:0002635 "negative regulation of germinal center formation" evidence=IEA

GO:0003730 "mRNA 3'-UTR binding" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IEA

GO:0030889 "negative regulation of B cell proliferation" evidence=IEA

GO:0033962 "cytoplasmic mRNA processing body assembly" evidence=IEA

GO:0043488 "regulation of mRNA stability" evidence=IEA

GO:0045623 "negative regulation of T-helper cell differentiation" evidence=IEA

GO:0046007 "negative regulation of activated T cell proliferation" evidence=IEA

GO:0050856 "regulation of T cell receptor signaling pathway" evidence=IEA

UNIPROTKB|F1S727 RC3H1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 351 (128.6 bits), Expect = 9.3e-31, P = 9.3e-31
 Identities = 72/100 (72%), Positives = 82/100 (82%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFRTYE+LRREHD+QIV+IA EAGLRIAPDQWSSLLYGD S KS
Sbjct:   256 KVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKS 315

Query:   100 HMQSIIDKLQNPQSFAQSVQ---VSRTRSPSPSLYRSVEP 136
             HMQSIIDKLQ P SFAQSVQ   ++  R+  P+    + P
Sbjct:   316 HMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRP 355

GO:0050856 "regulation of T cell receptor signaling pathway" evidence=IEA

GO:0046007 "negative regulation of activated T cell proliferation" evidence=IEA

GO:0045623 "negative regulation of T-helper cell differentiation" evidence=IEA

GO:0043488 "regulation of mRNA stability" evidence=IEA

GO:0033962 "cytoplasmic mRNA processing body assembly" evidence=IEA

GO:0030889 "negative regulation of B cell proliferation" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IEA

GO:0003730 "mRNA 3'-UTR binding" evidence=IEA

GO:0002635 "negative regulation of germinal center formation" evidence=IEA

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9P406 J9P406 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 65/80 (81%), Positives = 75/80 (93%)

Query:    40 KVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKS 99
             KV+KR+ DSSLMQLKEEFR+YE+LRREHDAQIV IA EAGLRI+P+QWSSLLYGD + KS
Sbjct:   253 KVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKS 312

Query:   100 HMQSIIDKLQNPQSFAQSVQ 119
             HMQSIIDKLQ+P+SFA+SVQ
Sbjct:   313 HMQSIIDKLQSPESFAKSVQ 332

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
KOG3161|consensus	861		100.0
KOG3161|consensus	861		100.0

>KOG3161|consensus

Probab=100.00  E-value=2.9e-47  Score=370.34  Aligned_cols=156  Identities=53%  Similarity=0.712  Sum_probs=150.6

Q ss_pred             hHHHHHHHHhccccccCCCCchhhhHHHHHHhHHHHhhhhhhHHHHHhhhhccccCcccchhhhcCCccccchhhhHHHh
Q psy17485         28 PVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDK  107 (237)
Q Consensus        28 pVnqaLlQlscf~V~krd~~ssLmqlkee~r~Ye~lRrehDaqiV~iA~EsgLri~peQwS~llyGd~~~~s~mqsIiDK  107 (237)
                      |++++||+++|+  .|||.++++|++|||+|+|+.||++||+||++||+|+|++|+||||++++|||        +||||
T Consensus        40 ~c~~~lyn~scp--~~~De~~~~~~~~e~p~n~alL~~~~d~~~~~~a~~~g~~ispe~~~~~qlg~--------~~I~k  109 (861)
T KOG3161|consen   40 HCVQLLYNASCP--TKRDEDSSLMQLKEEPRNYALLRREHDAQIVHIAMEAGLRISPEQWSSLQLGD--------SIIDK  109 (861)
T ss_pred             HHHHhHhhccCC--CCccccchhcChhhcchhHHHHHhhcchhhhhcccCCcccCCHHHHHHHHHHH--------HHHHH
Confidence            588999999999  89999999999999999999999999999999999999999999999999998        99999


Q ss_pred             hcCchhHHHHHHHHhhcCCCCCcccccCccccccccccCCCCCCCCCCChhHHHHHHHHhhhhhccccchhHHHHHHHhc
Q psy17485        108 LQNPQSFAQSVQVSRTRSPSPSLYRSVEPAVLRPVCTVQGSNPTSCTLSRPMQRKLIGLINCQILEDEGRGRAMRAARSI  187 (237)
Q Consensus       108 lqs~~Sf~q~v~el~~~~~~~alYRSlEpa~l~p~~~~~g~~~~~~~lsrpmqrKlv~L~~cql~e~eGr~ra~raar~~  187 (237)
                      |+++.+|+                              .|++..+..|+||||||+++|+||||.|.+||.++++|||. 
T Consensus       110 l~~~~~s~------------------------------~~~~~~~~~l~Rt~~rk~l~ll~~ql~e~~gr~~~l~a~r~-  158 (861)
T KOG3161|consen  110 LQSPESSA------------------------------KSVQELTIVLQRTGDRKNLNLLRPQLEELAGRDPNLDAVRP-  158 (861)
T ss_pred             Hhchhhhh------------------------------hcccccceeeeccccHHHHHHhhhHHHHhhCcccchhhhcc-
Confidence            99999997                              45556788999999999999999999999999999999997 


Q ss_pred             CCCCCCCCCCccchhHHHHHHHHHhccChhhHHHHHHHHHHhhcccccCC
Q psy17485        188 GPQSKARTPHRTSIGERAVTELNLQHQNPQQLSANLWAAVRARGCQFLGP  237 (237)
Q Consensus       188 ~~~~~~~~~~~~slgER~~~Elil~hqn~qqls~~LwaavRargCQflGP  237 (237)
                                   ++||+++|+||+|||+++||++||+||||||||||||
T Consensus       159 -------------~~Er~~~e~Il~~q~~~~lss~lw~avRarGcqflgP  195 (861)
T KOG3161|consen  159 -------------TWERLENEMILVKQVVHGLSSFLWNAVRARGCQFLGP  195 (861)
T ss_pred             -------------HHHHHHHHHHhhccchhHHHHHHHHHHHhcccccCCc
Confidence                         9999999999999999999999999999999999998

>KOG3161|consensus

Probab=100.00  E-value=1.2e-38  Score=310.45  Aligned_cols=110  Identities=55%  Similarity=0.693  Sum_probs=103.2

Q ss_pred             hHHHHHHHHhccccccCCCCchhhhHHHHHHhHHHHhhhhhhHHHHHhhhhccccCcccchhhhcCCccccchhhhHHHh
Q psy17485         28 PVNFALLQLVGVKVSKREGDSSLMQLKEEFRTYESLRREHDAQIVEIATEAGLRIAPDQWSSLLYGDASRKSHMQSIIDK  107 (237)
Q Consensus        28 pVnqaLlQlscf~V~krd~~ssLmqlkee~r~Ye~lRrehDaqiV~iA~EsgLri~peQwS~llyGd~~~~s~mqsIiDK  107 (237)
                      ||||+||||+||+|.||+++||||||||||||||+||||||+||||||+|+||||.|||||++||||..|||||||||||
T Consensus       242 hvVqllyrascf~V~kr~~~SslmqlkeefrTy~tlrrehdtqiVqiA~esglri~p~qwsslLyad~~hkshmqsiidk  321 (861)
T KOG3161|consen  242 HVVQLLYRASCFGVNKRVTTSSLMQLKEEFRTYTTLRREHDTQIVQIAEESGLRIIPRQWSSLLYADETHKSHMQSIIDK  321 (861)
T ss_pred             HHHHHHHHhhhhccccccchhhHHHHHHHhhhhhhhcccccchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhhh
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCchhHHHHHHHHhh------cCCCCCcccccCcc
Q psy17485        108 LQNPQSFAQSVQVSRT------RSPSPSLYRSVEPA  137 (237)
Q Consensus       108 lqs~~Sf~q~v~el~~------~~~~~alYRSlEpa  137 (237)
                      ||++.||+|+|+||+.      .+.+++...+++++
T Consensus       322 lq~~~s~aqsV~El~i~~~~~t~~s~~a~~s~l~~~  357 (861)
T KOG3161|consen  322 LQAAGSSAQSVTELKIGSPPKTPVSNVAATSALPSN  357 (861)
T ss_pred             hcCCCchhhhHHHHHhcCCCCCcccchhhccccccc
Confidence            9999999999999994      35566666665553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00