Psyllid ID: psy17490

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN
Secondary Structure (PSIPRED)
ccccccHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHcccEEEEEccccHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mqeeqkvddfyrdgqilvtggtgfMGKLLIDKLLRSFPDIGAIYIMVrdkkgsspeERVKNMLNSVN
Flexible Loop (DISEMBL)
mqeeqkvddfyrdgqilvtGGTGFMGKLLIDKLLRSFPDIGAIYIMVrdkkgsspeervknmlnsvn
Low Complexity Region (SEG)
MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN
Disordered region (IsUnstruct)
********DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR*******************
Disordered Region (DISOPRED)
*****KV**FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV*
Disordered Region (DISEMBL)
MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN
Disordered Region (DISPRO)
****QKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
Q7ZXF5	515	Fatty acyl-CoA reductase	N/A	N/A	0.865	0.112	0.5	1e-12
Q922J9	515	Fatty acyl-CoA reductase	yes	N/A	0.880	0.114	0.474	2e-12
Q66H50	515	Fatty acyl-CoA reductase	yes	N/A	0.865	0.112	0.465	4e-12
Q5R834	515	Fatty acyl-CoA reductase	yes	N/A	0.865	0.112	0.448	7e-12
Q8WVX9	515	Fatty acyl-CoA reductase	yes	N/A	0.865	0.112	0.448	7e-12
Q5ZM72	515	Fatty acyl-CoA reductase	no	N/A	0.835	0.108	0.464	2e-11
Q7TNT2	515	Fatty acyl-CoA reductase	no	N/A	0.835	0.108	0.517	5e-11
A1ZAI3	620	Putative fatty acyl-CoA r	yes	N/A	0.850	0.091	0.473	7e-11
Q0P5J1	515	Fatty acyl-CoA reductase	no	N/A	0.835	0.108	0.5	7e-11
A1ZAI5	625	Putative fatty acyl-CoA r	no	N/A	0.880	0.094	0.457	9e-11

>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/58 (50%), Positives = 43/58 (74%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
          + +FY+   +L+TG TGFMGK+L++KLLRS P+  A+Y++VR K G  P ERV  M++
Sbjct: 4  IPEFYQGKNVLITGATGFMGKVLLEKLLRSCPNTKAVYVLVRHKAGQKPRERVAEMMS 61

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.
Xenopus laevis (taxid: 8355)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2

>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/59 (47%), Positives = 46/59 (77%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S
Sbjct: 4  IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSS 62

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/58 (46%), Positives = 45/58 (77%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
          + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4  IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILS 61

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 45/58 (77%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
          + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4  IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 45/58 (77%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
          + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct: 4  IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 42/56 (75%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62
          + ++Y    +L+TG TGFMGK+L++KLLRS P + A+Y++VR K G +PE R++ +
Sbjct: 4  IPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIEEI 59

Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 41/56 (73%)

Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          FY +  IL+TG TGF+GK+L++KL R+ P +  IYI+VR K G + +ERV  +LNS
Sbjct: 7  FYSNKSILITGATGFLGKVLMEKLFRTSPHLKVIYILVRPKSGQTLQERVFQILNS 62

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|A1ZAI3|FACR2_DROME Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster GN=CG8303 PE=2 SV=2

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 7   VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML 63
           + +F+    I VTGGTGF+G +LI+ LL + PDIG IY++VR K+   P ER++ +L
Sbjct: 116 IPEFFAHKNIFVTGGTGFLGTVLIEALLDTHPDIGTIYVLVRGKRKFDPNERIRRLL 172

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 42/56 (75%)

Query: 10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          FY    IL+TG TGFMGK+L++KL R+ PD+  +YI+VR K+G + ++RV  +L+S
Sbjct: 7  FYGGKSILITGATGFMGKVLMEKLFRTSPDLKVVYILVRPKQGQTLQQRVFQILDS 62

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1

 Score = 65.5 bits (158), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 41/59 (69%)

Query: 7   VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
           +  FY    + +TGGTGFMGK+L++KLLRS P+I  IY+++R K+G     R+  +LN+
Sbjct: 119 IAQFYAGRSVFITGGTGFMGKVLVEKLLRSCPEIRNIYLLIRPKRGQEVSARLTELLNA 177

Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: n

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
307176727	606	Fatty acyl-CoA reductase 1 [Camponotus f	0.940	0.103	0.571	2e-14
332026208	223	Putative fatty acyl-CoA reductase [Acrom	0.880	0.264	0.593	1e-13
270008787	511	hypothetical protein TcasGA2_TC015381 [T	0.955	0.125	0.515	3e-13
91084219	491	PREDICTED: similar to GA11521-PA [Tribol	0.955	0.130	0.515	3e-13
322787692	469	hypothetical protein SINV_12809 [Solenop	0.925	0.132	0.548	7e-13
157107635	520	hypothetical protein AaeL_AAEL014866 [Ae	0.880	0.113	0.508	2e-12
157109488	520	hypothetical protein AaeL_AAEL005306 [Ae	0.880	0.113	0.508	2e-12
156541926	545	PREDICTED: putative fatty acyl-CoA reduc	0.985	0.121	0.513	2e-12
270008642	516	hypothetical protein TcasGA2_TC015188 [T	0.910	0.118	0.508	3e-12
91084633	522	PREDICTED: similar to conserved hypothet	0.910	0.116	0.508	3e-12

>gi|307176727|gb|EFN66142.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 49/63 (77%)

Query: 3   EEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62
           E   V DFYRD  I +TGGTGFMGK+L++KLLRS PDI  IY+++R KKG + +ER++ +
Sbjct: 98  EYTSVKDFYRDRSIFITGGTGFMGKVLVEKLLRSCPDIKNIYLLMRPKKGQNVQERLQEL 157

Query: 63  LNS 65
           LN+
Sbjct: 158 LNA 160

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332026208|gb|EGI66350.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior]

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 44/59 (74%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          + DFY D  I +TGGTGF+GK+LI+KLLRS PDI  IY+M+R +K  SPE R+  ML S
Sbjct: 11 IQDFYADTTIFITGGTGFLGKMLIEKLLRSCPDISMIYVMIRSQKDKSPENRLDEMLES 69

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008787|gb|EFA05235.1| hypothetical protein TcasGA2_TC015381 [Tribolium castaneum]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/64 (51%), Positives = 48/64 (75%)

Query: 1  MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
          M  +  V +FY++  IL+TG TGFMGK+LI+KLLRS P +  IY++VR KKG  P ER++
Sbjct: 1  MSNKSAVAEFYKNRHILITGATGFMGKVLIEKLLRSCPQLSTIYLLVRPKKGKKPNERLE 60

Query: 61 NMLN 64
          +++N
Sbjct: 61 DIIN 64

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91084219|ref|XP_968755.1| PREDICTED: similar to GA11521-PA [Tribolium castaneum]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/64 (51%), Positives = 48/64 (75%)

Query: 1  MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
          M  +  V +FY++  IL+TG TGFMGK+LI+KLLRS P +  IY++VR KKG  P ER++
Sbjct: 1  MSNKSAVAEFYKNRHILITGATGFMGKVLIEKLLRSCPQLSTIYLLVRPKKGKKPNERLE 60

Query: 61 NMLN 64
          +++N
Sbjct: 61 DIIN 64

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787692|gb|EFZ13704.1| hypothetical protein SINV_12809 [Solenopsis invicta]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/62 (54%), Positives = 46/62 (74%)

Query: 3  EEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM 62
          E   V DFYRD  I +TG TGFMGK+L++KLLRS PDI  IY+++R KK  + +ER++ +
Sbjct: 7  EYTSVKDFYRDRSIFITGATGFMGKVLVEKLLRSCPDIKNIYLLMRPKKSQNVQERLQEL 66

Query: 63 LN 64
          LN
Sbjct: 67 LN 68

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107635|ref|XP_001649869.1| hypothetical protein AaeL_AAEL014866 [Aedes aegypti] gi|108868671|gb|EAT32896.1| AAEL014866-PA [Aedes aegypti]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 47/59 (79%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          V +FY   ++ +TGGTGFMGK+LI+KLLRS PD+G +++++R K+G +PE RV+ + N+
Sbjct: 21 VPEFYTGAEVFLTGGTGFMGKVLIEKLLRSCPDVGRVFVLMRCKQGKTPETRVRELTNN 79

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157109488|ref|XP_001650694.1| hypothetical protein AaeL_AAEL005306 [Aedes aegypti] gi|108879024|gb|EAT43249.1| AAEL005306-PA [Aedes aegypti]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 47/59 (79%)

Query: 7  VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          V +FY   ++ +TGGTGFMGK+LI+KLLRS PD+G +++++R K+G +PE RV+ + N+
Sbjct: 21 VPEFYTGAEVFLTGGTGFMGKVLIEKLLRSCPDVGRVFVLMRCKQGKTPETRVRELTNN 79

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156541926|ref|XP_001600309.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 8/74 (10%)

Query: 1  MQEEQ--------KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG 52
          M++EQ        +V  FY    ILVTGG+GF+GKLLI+KLLRS P +G +Y+M+R KKG
Sbjct: 21 MKDEQPNLDSGVSEVTRFYAGLNILVTGGSGFLGKLLIEKLLRSCPKVGKLYLMMRAKKG 80

Query: 53 SSPEERVKNMLNSV 66
           SPE R K   + V
Sbjct: 81 KSPEHRFKEHFDDV 94

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008642|gb|EFA05090.1| hypothetical protein TcasGA2_TC015188 [Tribolium castaneum]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 46/61 (75%)

Query: 2  QEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          +E+ ++ +FY++  +LVTG TGF+GKLL++KLLR+ PD+G IYI+VR KKG     RV  
Sbjct: 22 REKSQIAEFYKEKNVLVTGATGFLGKLLVEKLLRACPDLGTIYILVRPKKGEDEHSRVDK 81

Query: 62 M 62
          +
Sbjct: 82 L 82

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91084633|ref|XP_974667.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/61 (50%), Positives = 46/61 (75%)

Query: 2  QEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          +E+ ++ +FY++  +LVTG TGF+GKLL++KLLR+ PD+G IYI+VR KKG     RV  
Sbjct: 22 REKSQIAEFYKEKNVLVTGATGFLGKLLVEKLLRACPDLGTIYILVRPKKGEDEHSRVDK 81

Query: 62 M 62
          +
Sbjct: 82 L 82

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
UNIPROTKB|E1C6H7	511	FAR2 "Uncharacterized protein"	0.850	0.111	0.578	1.3e-12
ZFIN|ZDB-GENE-060503-367	515	si:dkey-97m3.1 "si:dkey-97m3.1	0.850	0.110	0.526	4.7e-12
MGI|MGI:1914670	515	Far1 "fatty acyl CoA reductase	0.880	0.114	0.474	1e-11
UNIPROTKB|E9PNW8	335	FAR1 "Fatty acyl-CoA reductase	0.865	0.173	0.448	1e-11
RGD|1306647	515	Far1 "fatty acyl CoA reductase	0.865	0.112	0.465	2.1e-11
UNIPROTKB|Q66H50	515	Far1 "Fatty acyl-CoA reductase	0.865	0.112	0.465	2.1e-11
UNIPROTKB|Q8WVX9	515	FAR1 "Fatty acyl-CoA reductase	0.865	0.112	0.448	2.7e-11
UNIPROTKB|E2R4R9	514	FAR1 "Uncharacterized protein"	0.865	0.112	0.431	4.4e-11
UNIPROTKB|A5PJQ0	515	FAR1 "Uncharacterized protein"	0.865	0.112	0.431	4.4e-11
ZFIN|ZDB-GENE-040426-2908	464	far1 "fatty acyl CoA reductase	0.865	0.125	0.465	4.7e-11

UNIPROTKB|E1C6H7 FAR2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 176 (67.0 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML 63
             V  +Y    +L+TG TGFMGK+L++KLLRS PD+ A+YI+VR K G S +ERV NML
Sbjct:     4 VSAYYNGKTVLITGATGFMGKVLVEKLLRSSPDVKAVYILVRPKAGQSMQERVANML 60

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)]

 Score = 171 (65.3 bits), Expect = 4.7e-12, P = 4.7e-12
 Identities = 30/57 (52%), Positives = 44/57 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNML 63
             + ++Y    +L+TG TGFMGK+L++KLLRS PD+ A+YI+VR K G S  ERV++M+
Sbjct:     4 ISEWYAGKNVLITGATGFMGKVLVEKLLRSCPDVNALYILVRPKAGQSMSERVQDMM 60

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)]

 Score = 168 (64.2 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 28/59 (47%), Positives = 46/59 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+S
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSS 62

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO;IDA

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=ISO

GO:0010025 "wax biosynthetic process" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=ISO

UNIPROTKB|E9PNW8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 164 (62.8 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 26/58 (44%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 165 (63.1 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 27/58 (46%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILS 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=IEA;ISO

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISO

GO:0010025 "wax biosynthetic process" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA;ISO

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA;ISO

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA;ISO

UNIPROTKB|Q66H50 Far1 "Fatty acyl-CoA reductase 1" [Rattus norvegicus (taxid:10116)]

 Score = 165 (63.1 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 27/58 (46%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    IL+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct:     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILS 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)]

 Score = 164 (62.8 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 26/58 (44%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +L+
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLS 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IDA

GO:0008611 "ether lipid biosynthetic process" evidence=IMP;TAS

GO:0005777 "peroxisome" evidence=IDA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 162 (62.1 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 25/58 (43%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +++
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVIS 61

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 162 (62.1 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 25/58 (43%), Positives = 45/58 (77%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    +L+TG TGF+GK+L++KLLRS P + ++Y++VR K G +P+ERV+ +++
Sbjct:     4 IPEYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVIS 61

GO:0050062 "long-chain-fatty-acyl-CoA reductase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0035336 "long-chain fatty-acyl-CoA metabolic process" evidence=IEA

GO:0010025 "wax biosynthetic process" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2908 far1 "fatty acyl CoA reductase 1" [Danio rerio (taxid:7955)]

 Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 27/58 (46%), Positives = 43/58 (74%)

Query:     7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
             + ++Y    +L+TG TGFMGK+L++KLLRS P + A Y++VR K G +P+ R+ +M+N
Sbjct:     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMIN 61

GO:0000166 "nucleotide binding" evidence=IEA

GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	67
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	7e-21
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	9e-14
PLN02503	605	PLN02503, PLN02503, fatty acyl-CoA reductase 2	1e-13
PLN02996	491	PLN02996, PLN02996, fatty acyl-CoA reductase	5e-08
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-07
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-06
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	6e-06
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	2e-05
cd08946	200	cd08946, SDR_e, extended (e) SDRs	8e-05
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	6e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	7e-04
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	8e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.002
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	0.002
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.002
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	0.003
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.003
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	0.004
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	0.004
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	0.004

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 82.3 bits (204), Expect = 7e-21
 Identities = 28/50 (56%), Positives = 40/50 (80%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
          +L+TG TGF+GK+L++KLLRS PDIG IY+++R K G S EER++ +L  
Sbjct: 3  VLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKD 52

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 62.2 bits (152), Expect = 9e-14
 Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)

Query: 18 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          +TG TGF+GK+L++KLLRS P++  IY +VR K G S  ER++ 
Sbjct: 1  LTGATGFLGKVLLEKLLRSTPEV-KIYCLVRAKDGESALERLRQ 43

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2

 Score = 63.0 bits (153), Expect = 1e-13
 Identities = 25/61 (40%), Positives = 41/61 (67%)

Query: 1   MQEEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
           M +   + +F R    L+TG TGF+ K+LI+K+LR+ PD+G IY++++ K   +  ER+K
Sbjct: 107 MADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLK 166

Query: 61  N 61
           N
Sbjct: 167 N 167

Length = 605

>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase

 Score = 47.0 bits (112), Expect = 5e-08
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query: 3  EEQKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          EE     F  +  ILVTG TGF+ K+ ++K+LR  P++  +Y+++R     S  +R+ +
Sbjct: 1  EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHD 59

Length = 491

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
           +L+TG TGF+G  L+ +LL+   ++  IY +VR K   +  ER+ + L  
Sbjct: 1  TVLLTGATGFLGAYLLRELLKR-KNVSKIYCLVRAKDEEAALERLIDNLKE 50

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
           VTGGTGF+G+ L+ +LL    +   ++++VR 
Sbjct: 4  FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRR 35

Length = 657

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 41.2 bits (97), Expect = 6e-06
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV 59
          + VTGGTGF+G+ L+ +LL    +   + ++VR +      ER+
Sbjct: 1  VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVRSESLGEAHERI 41

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
           +L+TG TGF+G  L+++LLR       +  +VR        ER++  L S
Sbjct: 1  TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRS 50

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 37.7 bits (88), Expect = 8e-05
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDI 40
          ILVTGG GF+G  L+ +LL    ++
Sbjct: 1  ILVTGGAGFIGSHLVRRLLERGHEV 25

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 35.4 bits (82), Expect = 6e-04
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE 56
          ILVTG  G +G+LL  +L  S P +  +  + R +   SP 
Sbjct: 1  ILVTGAAGGLGRLLARRLAAS-PRVIGVDGLDRRRPPGSPP 40

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 35.3 bits (82), Expect = 7e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYI 45
          ILVTGGTGF+G  L+ +LL+   ++  +  
Sbjct: 1  ILVTGGTGFIGSHLVRRLLQEGYEVIVLGR 30

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 35.1 bits (81), Expect = 8e-04
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48
          +L+TG TGF+G  L+ +LL        +  +VR
Sbjct: 3  VLLTGATGFLGAYLLLELLDRSD--AKVICLVR 33

Length = 382

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS 54
          IL+TGGTG +G+ L  +L +       + I+ R    +S
Sbjct: 1  ILITGGTGLIGRALTARLRKGGHQ---VTILTRRPPKAS 36

Length = 297

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 33.7 bits (77), Expect = 0.002
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
          ILVTG TGF+G  ++ +LL    +   +   VR+ +
Sbjct: 3  ILVTGATGFVGGAVVRELLARGHE---VRAAVRNPE 35

Length = 275

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 33.8 bits (77), Expect = 0.002
 Identities = 12/20 (60%), Positives = 16/20 (80%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          ILVTGG GF+G  L+++LL 
Sbjct: 3  ILVTGGAGFIGSHLVERLLA 22

Length = 314

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
          ILVTG TG +G  +++ LL     + A+   VR+
Sbjct: 1  ILVTGATGKLGTAVVELLLAKVASVVAL---VRN 31

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE--ERVKNMLNSVN 67
          IL+TGGTGF+G+ L  +L +   +   + I+ R     +    E  K       
Sbjct: 1  ILITGGTGFIGRALTQRLTKRGHE---VTILTRSPPPGANTKWEGYKPWAGEDA 51

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 13/20 (65%), Positives = 16/20 (80%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          ILVTGG GF+G  L+D+LL 
Sbjct: 2  ILVTGGAGFIGSHLVDRLLE 21

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 33.2 bits (76), Expect = 0.004
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERV 59
          +LVTGG+GF G+ L+ +LL    + G  Y+   D   + P E +
Sbjct: 2  VLVTGGSGFFGERLVKQLL----ERGGTYVRSFDI--APPGEAL 39

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          IL+TGG GF+G  L D+LL 
Sbjct: 3  ILITGGAGFLGSHLCDRLLE 22

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
PLN02996	491	fatty acyl-CoA reductase	99.38
PLN02503	605	fatty acyl-CoA reductase 2	99.34
KOG1221|consensus	467		99.31
KOG1502|consensus	327		99.24
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.05
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.03
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.02
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.01
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.0
PLN02427	386	UDP-apiose/xylose synthase	98.96
CHL00194	317	ycf39 Ycf39; Provisional	98.96
PLN02572	442	UDP-sulfoquinovose synthase	98.95
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.93
PLN02206	442	UDP-glucuronate decarboxylase	98.93
PLN00198	338	anthocyanidin reductase; Provisional	98.92
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	98.92
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.92
PLN02583	297	cinnamoyl-CoA reductase	98.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	98.89
PLN02650	351	dihydroflavonol-4-reductase	98.89
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.89
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.87
PLN02653	340	GDP-mannose 4,6-dehydratase	98.87
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.86
PLN02214	342	cinnamoyl-CoA reductase	98.85
KOG1429|consensus	350		98.84
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.83
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.83
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.82
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.8
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.8
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.79
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.78
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.78
PLN02240	352	UDP-glucose 4-epimerase	98.77
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.75
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.75
PLN02686	367	cinnamoyl-CoA reductase	98.75
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.74
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.72
PLN02260	668	probable rhamnose biosynthetic enzyme	98.72
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.72
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.71
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.71
PRK06194	287	hypothetical protein; Provisional	98.71
PLN02778	298	3,5-epimerase/4-reductase	98.71
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.7
PRK05717	255	oxidoreductase; Validated	98.69
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.69
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.69
PRK12828	239	short chain dehydrogenase; Provisional	98.69
PRK09135	249	pteridine reductase; Provisional	98.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.68
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.68
PRK07806	248	short chain dehydrogenase; Provisional	98.68
PRK07201	657	short chain dehydrogenase; Provisional	98.68
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.68
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.68
PRK12320	699	hypothetical protein; Provisional	98.67
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.67
PRK09186	256	flagellin modification protein A; Provisional	98.66
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.66
PRK12829	264	short chain dehydrogenase; Provisional	98.65
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.65
PRK07774	250	short chain dehydrogenase; Provisional	98.64
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.64
PRK07890	258	short chain dehydrogenase; Provisional	98.64
PRK06057	255	short chain dehydrogenase; Provisional	98.63
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.63
PRK06179	270	short chain dehydrogenase; Provisional	98.62
PRK06180	277	short chain dehydrogenase; Provisional	98.62
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.62
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.61
PLN00016	378	RNA-binding protein; Provisional	98.61
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.61
PRK06914	280	short chain dehydrogenase; Provisional	98.61
PRK08628	258	short chain dehydrogenase; Provisional	98.6
PRK06523	260	short chain dehydrogenase; Provisional	98.6
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.59
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.59
PRK07576	264	short chain dehydrogenase; Provisional	98.59
PRK06138	252	short chain dehydrogenase; Provisional	98.59
PRK07814	263	short chain dehydrogenase; Provisional	98.59
PRK12367	245	short chain dehydrogenase; Provisional	98.58
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.58
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.57
PRK06196	315	oxidoreductase; Provisional	98.57
PRK06398	258	aldose dehydrogenase; Validated	98.57
PRK12827	249	short chain dehydrogenase; Provisional	98.57
PRK08703	239	short chain dehydrogenase; Provisional	98.56
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.56
PRK08264	238	short chain dehydrogenase; Validated	98.56
PRK07856	252	short chain dehydrogenase; Provisional	98.56
PRK05875	276	short chain dehydrogenase; Provisional	98.55
PRK07067	257	sorbitol dehydrogenase; Provisional	98.55
PRK07577	234	short chain dehydrogenase; Provisional	98.55
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.55
PRK06197	306	short chain dehydrogenase; Provisional	98.55
PRK07063	260	short chain dehydrogenase; Provisional	98.55
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.55
PRK07326	237	short chain dehydrogenase; Provisional	98.54
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.54
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.54
PRK08278	273	short chain dehydrogenase; Provisional	98.54
PRK06841	255	short chain dehydrogenase; Provisional	98.54
PRK06182	273	short chain dehydrogenase; Validated	98.54
PLN03209	576	translocon at the inner envelope of chloroplast su	98.53
PRK07102	243	short chain dehydrogenase; Provisional	98.53
PRK06482	276	short chain dehydrogenase; Provisional	98.53
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.53
PRK06500	249	short chain dehydrogenase; Provisional	98.53
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.53
PRK08226	263	short chain dehydrogenase; Provisional	98.53
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.53
PRK06949	258	short chain dehydrogenase; Provisional	98.53
PRK09072	263	short chain dehydrogenase; Provisional	98.53
PRK12939	250	short chain dehydrogenase; Provisional	98.52
PRK06172	253	short chain dehydrogenase; Provisional	98.52
PRK05854	313	short chain dehydrogenase; Provisional	98.52
PRK05866	293	short chain dehydrogenase; Provisional	98.52
PRK07023	243	short chain dehydrogenase; Provisional	98.52
PRK08263	275	short chain dehydrogenase; Provisional	98.51
PRK07825	273	short chain dehydrogenase; Provisional	98.51
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.51
PRK07035	252	short chain dehydrogenase; Provisional	98.51
PRK06114	254	short chain dehydrogenase; Provisional	98.5
PRK08265	261	short chain dehydrogenase; Provisional	98.5
PRK06128	300	oxidoreductase; Provisional	98.5
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.5
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.5
PRK10538	248	malonic semialdehyde reductase; Provisional	98.5
PLN02253	280	xanthoxin dehydrogenase	98.5
PRK09291	257	short chain dehydrogenase; Provisional	98.49
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.49
PRK06701	290	short chain dehydrogenase; Provisional	98.49
PRK05867	253	short chain dehydrogenase; Provisional	98.49
PRK07478	254	short chain dehydrogenase; Provisional	98.49
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.49
PRK05993	277	short chain dehydrogenase; Provisional	98.49
PRK07062	265	short chain dehydrogenase; Provisional	98.48
PRK07060	245	short chain dehydrogenase; Provisional	98.48
PRK06101	240	short chain dehydrogenase; Provisional	98.48
PRK08589	272	short chain dehydrogenase; Validated	98.47
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.47
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.47
PRK05876	275	short chain dehydrogenase; Provisional	98.47
PRK08177	225	short chain dehydrogenase; Provisional	98.47
PRK07904	253	short chain dehydrogenase; Provisional	98.46
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.46
PRK08267	260	short chain dehydrogenase; Provisional	98.46
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.46
PRK07454	241	short chain dehydrogenase; Provisional	98.46
KOG1371|consensus	343		98.45
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.45
PRK08251	248	short chain dehydrogenase; Provisional	98.45
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.44
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.44
PRK05693	274	short chain dehydrogenase; Provisional	98.44
PRK06924	251	short chain dehydrogenase; Provisional	98.44
PRK07985	294	oxidoreductase; Provisional	98.44
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.43
PRK07074	257	short chain dehydrogenase; Provisional	98.43
PRK08643	256	acetoin reductase; Validated	98.43
PRK07024	257	short chain dehydrogenase; Provisional	98.43
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.43
PRK12746	254	short chain dehydrogenase; Provisional	98.43
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.42
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.42
PRK08339	263	short chain dehydrogenase; Provisional	98.42
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.42
COG2910	211	Putative NADH-flavin reductase [General function p	98.41
PRK12747	252	short chain dehydrogenase; Provisional	98.41
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.41
PRK08017	256	oxidoreductase; Provisional	98.41
PRK12742	237	oxidoreductase; Provisional	98.41
PRK07775	274	short chain dehydrogenase; Provisional	98.41
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.41
PRK12937	245	short chain dehydrogenase; Provisional	98.4
PRK06181	263	short chain dehydrogenase; Provisional	98.4
PRK06483	236	dihydromonapterin reductase; Provisional	98.39
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.39
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	98.38
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.38
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.37
PRK05865	854	hypothetical protein; Provisional	98.37
PRK06198	260	short chain dehydrogenase; Provisional	98.36
PRK12744	257	short chain dehydrogenase; Provisional	98.36
PRK09242	257	tropinone reductase; Provisional	98.35
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.35
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.35
PRK08219	227	short chain dehydrogenase; Provisional	98.35
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.35
PRK05872	296	short chain dehydrogenase; Provisional	98.34
PRK09134	258	short chain dehydrogenase; Provisional	98.34
PRK07109	334	short chain dehydrogenase; Provisional	98.34
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.34
PLN02780	320	ketoreductase/ oxidoreductase	98.34
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.34
PRK05650	270	short chain dehydrogenase; Provisional	98.33
PRK07097	265	gluconate 5-dehydrogenase; Provisional	98.33
KOG1430|consensus	361		98.32
PRK06139	330	short chain dehydrogenase; Provisional	98.32
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.32
PRK07677	252	short chain dehydrogenase; Provisional	98.31
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.31
PRK12743	256	oxidoreductase; Provisional	98.31
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.3
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.3
PRK06953	222	short chain dehydrogenase; Provisional	98.29
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.27
KOG1205|consensus	282		98.24
PRK08303	305	short chain dehydrogenase; Provisional	98.24
PRK05884	223	short chain dehydrogenase; Provisional	98.24
PRK07832	272	short chain dehydrogenase; Provisional	98.24
PLN02260	668	probable rhamnose biosynthetic enzyme	98.23
PRK06125	259	short chain dehydrogenase; Provisional	98.23
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.23
PRK07791	286	short chain dehydrogenase; Provisional	98.23
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.23
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.22
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.22
PRK07201	657	short chain dehydrogenase; Provisional	98.22
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.22
PRK07069	251	short chain dehydrogenase; Validated	98.21
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.21
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.21
PRK09620	229	hypothetical protein; Provisional	98.2
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.2
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.2
KOG1431|consensus	315		98.19
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.19
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.19
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.18
PRK05855	582	short chain dehydrogenase; Validated	98.18
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.18
PRK06123	248	short chain dehydrogenase; Provisional	98.16
PRK07831	262	short chain dehydrogenase; Provisional	98.16
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.15
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.14
PRK06720	169	hypothetical protein; Provisional	98.14
PRK08862	227	short chain dehydrogenase; Provisional	98.13
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.13
PRK08324	681	short chain dehydrogenase; Validated	98.13
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.13
PRK14982	340	acyl-ACP reductase; Provisional	98.12
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.11
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.1
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.1
PRK07578	199	short chain dehydrogenase; Provisional	98.08
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.08
PRK06484	520	short chain dehydrogenase; Validated	98.08
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.07
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.07
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.06
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.05
PRK08309	177	short chain dehydrogenase; Provisional	98.04
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.04
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.04
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.04
PRK06484	520	short chain dehydrogenase; Validated	98.03
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.02
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.02
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.01
COG1028	251	FabG Dehydrogenases with different specificities (	97.98
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.96
PRK07041	230	short chain dehydrogenase; Provisional	97.94
PRK05599	246	hypothetical protein; Provisional	97.91
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.91
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.9
KOG1201|consensus	300		97.89
KOG0725|consensus	270		97.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	97.85
KOG4169|consensus	261		97.81
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	97.81
KOG1208|consensus	314		97.79
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.79
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.74
PRK06940	275	short chain dehydrogenase; Provisional	97.72
KOG1014|consensus	312		97.62
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.62
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.59
KOG4039|consensus	238		97.59
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.58
KOG1203|consensus	411		97.57
KOG0747|consensus	331		97.55
PRK05086	312	malate dehydrogenase; Provisional	97.5
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.47
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	97.46
PLN00015	308	protochlorophyllide reductase	97.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.42
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.4
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.38
KOG1611|consensus	249		97.37
KOG1207|consensus	245		97.35
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.31
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	97.28
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.28
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.27
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.22
KOG1372|consensus	376		97.21
KOG2865|consensus	391		97.19
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.1
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.05
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.03
PTZ00325	321	malate dehydrogenase; Provisional	97.03
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.01
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.99
PRK08655	437	prephenate dehydrogenase; Provisional	96.94
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.92
PLN00106	323	malate dehydrogenase	96.91
KOG1200|consensus	256		96.89
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.88
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.85
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.84
PLN02383	344	aspartate semialdehyde dehydrogenase	96.83
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.8
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.79
PRK06849	389	hypothetical protein; Provisional	96.77
KOG1478|consensus	341		96.77
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.76
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.74
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.73
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.72
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.68
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.65
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.58
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.55
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.52
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.49
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.48
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.46
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.46
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.45
PRK09496	453	trkA potassium transporter peripheral membrane com	96.44
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.44
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.42
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.41
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.39
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.33
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.33
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.3
PRK06444	197	prephenate dehydrogenase; Provisional	96.3
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.27
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.25
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.24
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.22
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.22
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.21
PRK05442	326	malate dehydrogenase; Provisional	96.19
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.17
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.17
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.15
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.15
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.13
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.1
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.09
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
KOG1209|consensus	289		96.09
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.05
KOG1210|consensus	331		96.0
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.0
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.0
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.99
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.98
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.97
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.95
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.95
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.93
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.93
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.91
PLN02256	304	arogenate dehydrogenase	95.87
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.86
PRK08818	370	prephenate dehydrogenase; Provisional	95.84
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.83
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	95.78
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	95.77
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	95.66
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.61
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	95.58
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.57
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.54
KOG1198|consensus	347		95.53
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.51
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.5
PRK07417	279	arogenate dehydrogenase; Reviewed	95.49
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.44
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.43
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.42
PTZ00117	319	malate dehydrogenase; Provisional	95.42
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.41
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.41
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.41
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.4
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	95.36
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	95.36
PRK00711	416	D-amino acid dehydrogenase small subunit; Validate	95.36
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.35
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	95.32
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.31
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.3
PRK13243	333	glyoxylate reductase; Reviewed	95.29
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.27
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.26
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.26
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.25
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.24
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.24
KOG1199|consensus	260		95.23
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.21
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.21
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.19
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.17
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.17
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.13
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.13
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.13
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.13
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.12
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.1
PRK06223	307	malate dehydrogenase; Reviewed	95.09
PRK09496	453	trkA potassium transporter peripheral membrane com	95.09
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.07
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.07
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.07
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.05
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.01
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.01
TIGR00243	389	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	95.0
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.96
PLN00112	444	malate dehydrogenase (NADP); Provisional	94.95
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.94
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.91
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	94.84
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	94.83
KOG0023|consensus	360		94.83
PRK08328	231	hypothetical protein; Provisional	94.78
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.77
PRK12480	330	D-lactate dehydrogenase; Provisional	94.76
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.75
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	94.72
PLN02602	350	lactate dehydrogenase	94.71
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	94.71
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	94.69
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.66
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	94.65
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.62
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.56
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	94.56
TIGR00036	266	dapB dihydrodipicolinate reductase.	94.54
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.52
PLN02712	667	arogenate dehydrogenase	94.47
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	94.46
PRK08223	287	hypothetical protein; Validated	94.39
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.38
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	94.36
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.36
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.33
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	94.32
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.32
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.31
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	94.3
PLN00203	519	glutamyl-tRNA reductase	94.29
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	94.28
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.27
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.25
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.22
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.22
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.22
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.21
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.2
PRK14031	444	glutamate dehydrogenase; Provisional	94.19
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	94.16
KOG1610|consensus	322		94.15
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	94.15
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.15
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.14
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.08
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	94.04
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.04
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.04
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.02
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.0
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	93.99
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.99
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	93.97
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	93.96
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	93.95
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	93.92
PLN02928	347	oxidoreductase family protein	93.92
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.91
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	93.91
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.9
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	93.89
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.89

>PLN02996 fatty acyl-CoA reductase

Probab=99.38  E-value=3.3e-12  Score=83.07  Aligned_cols=56  Identities=32%  Similarity=0.697  Sum_probs=48.6

Q ss_pred             cchhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490          5 QKVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK   60 (67)
Q Consensus         5 ~~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~   60 (67)
                      ..+.+++++++|+|||||||+|+++++.|+...++..+|+++.|........+++.
T Consensus         3 ~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~   58 (491)
T PLN02996          3 GSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLH   58 (491)
T ss_pred             ccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHH
Confidence            35678999999999999999999999999987666779999999888777777764

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.34  E-value=4.5e-12  Score=84.25  Aligned_cols=55  Identities=42%  Similarity=0.854  Sum_probs=47.9

Q ss_pred             chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490          6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK   60 (67)
Q Consensus         6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~   60 (67)
                      .+.+++++++|+|||||||+|+++++.|++..++..+|+++.|.+....+.+++.
T Consensus       112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~  166 (605)
T PLN02503        112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLK  166 (605)
T ss_pred             chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHH
Confidence            4567899999999999999999999999987666679999999887777777774

>KOG1221|consensus

Probab=99.31  E-value=1.1e-11  Score=80.32  Aligned_cols=60  Identities=47%  Similarity=0.927  Sum_probs=54.9

Q ss_pred             chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhc
Q psy17490          6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS   65 (67)
Q Consensus         6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~   65 (67)
                      +..+++++++|+|||||||+|+-+++.|++..|+..+|+++.|.+...++.+|+..++.+
T Consensus         5 ~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~   64 (467)
T KOG1221|consen    5 DIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD   64 (467)
T ss_pred             cHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh
Confidence            467899999999999999999999999999988888999999999999999998887665

>KOG1502|consensus

Probab=99.24  E-value=2.1e-11  Score=76.14  Aligned_cols=46  Identities=26%  Similarity=0.444  Sum_probs=38.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK   60 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~   60 (67)
                      .+++++||||+||||+|+++.|+++   |+.|+...|++.+....+.+.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~r---GY~V~gtVR~~~~~k~~~~L~   50 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSR---GYTVRGTVRDPEDEKKTEHLR   50 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhC---CCEEEEEEcCcchhhhHHHHH
Confidence            5689999999999999999999998   799999999988644433333

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.05  E-value=4.5e-10  Score=70.00  Aligned_cols=37  Identities=24%  Similarity=0.300  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+|+||||+||||++++++|+++   +++|++++|..
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~---g~~V~~~d~~~   49 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFL---NQTVIGLDNFS   49 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            56789999999999999999999997   57999999854

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.03  E-value=5.2e-10  Score=70.92  Aligned_cols=49  Identities=27%  Similarity=0.517  Sum_probs=42.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      +++++||||||+|++++.+|+.+.+  .+|+|++|..+++.+.+|+++.+.
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~   49 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFD   49 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhh
Confidence            4799999999999999999999743  599999999887778888877654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.02  E-value=7.3e-10  Score=68.90  Aligned_cols=39  Identities=36%  Similarity=0.475  Sum_probs=34.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+|+||||+||||+++++.|++.   +++|++++|+..
T Consensus         1 ~~~~k~ilItGatG~IG~~l~~~L~~~---G~~V~~~~r~~~   39 (349)
T TIGR02622         1 FWQGKKVLVTGHTGFKGSWLSLWLLEL---GAEVYGYSLDPP   39 (349)
T ss_pred             CcCCCEEEEECCCChhHHHHHHHHHHC---CCEEEEEeCCCc
Confidence            367899999999999999999999997   689999998765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.01  E-value=1.1e-09  Score=67.00  Aligned_cols=37  Identities=27%  Similarity=0.430  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+||||+||||++++++|+++   +++|++++|+..
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~---g~~V~~~~r~~~   39 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQR---GYTVKATVRDPN   39 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHC---CCEEEEEEcCCC
Confidence            4689999999999999999999997   689999998754

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.00  E-value=5.5e-10  Score=66.96  Aligned_cols=44  Identities=45%  Similarity=0.807  Sum_probs=33.3

Q ss_pred             EEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHH
Q psy17490         18 VTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNM   62 (67)
Q Consensus        18 itGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~   62 (67)
                      |||||||+|++++.+|+++.+.. +|+|+.|..+.....+++.+.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~   44 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDA   44 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhh
Confidence            79999999999999999985333 999999987655566666544

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=98.96  E-value=1.4e-09  Score=68.51  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=33.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.|+|+||||+||||+++++.|+++.  +++|++++|..
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~--g~~V~~l~r~~   49 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTET--PHKVLALDVYN   49 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcC--CCEEEEEecCc
Confidence            4566899999999999999999999962  47899998764

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.96  E-value=1.1e-09  Score=67.49  Aligned_cols=35  Identities=26%  Similarity=0.437  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|||||||+|++++++|+++   +++|++++|+.+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~---g~~V~~l~R~~~   35 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDE---GYQVRCLVRNLR   35 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC---CCeEEEEEcChH
Confidence            57999999999999999999997   689999999753

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.95  E-value=1.4e-09  Score=70.14  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=32.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ..+++++|+||||+||||++++++|+++   +++|+++++
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~---G~~V~~~d~   79 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKR---GYEVAIVDN   79 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEec
Confidence            4467889999999999999999999997   688999875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.93  E-value=1.9e-09  Score=72.16  Aligned_cols=41  Identities=29%  Similarity=0.486  Sum_probs=35.0

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|+|+||||+||||++++++|+++  .+++|++++|...
T Consensus       311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~--~g~~V~~l~r~~~  351 (660)
T PRK08125        311 SAKRRTRVLILGVNGFIGNHLTERLLRD--DNYEVYGLDIGSD  351 (660)
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHhC--CCcEEEEEeCCch
Confidence            3567899999999999999999999985  2589999998653

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.93  E-value=1.8e-09  Score=69.74  Aligned_cols=35  Identities=29%  Similarity=0.588  Sum_probs=31.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|+|+||||+||||++++++|+++   +++|++++|.
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~---G~~V~~ld~~  152 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMAR---GDSVIVVDNF  152 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHC---cCEEEEEeCC
Confidence            5689999999999999999999997   6899998875

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.92  E-value=2.5e-09  Score=66.12  Aligned_cols=38  Identities=39%  Similarity=0.505  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|+||||+||||++++++|++.   +++|+++.|+..
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~---g~~V~~~~r~~~   44 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQK---GYAVNTTVRDPE   44 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHC---CCEEEEEECCCC
Confidence            45789999999999999999999997   678988888754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=98.92  E-value=2.3e-09  Score=66.53  Aligned_cols=35  Identities=29%  Similarity=0.264  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||+||||+++++.|++.   +++|++++|.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~   35 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEK---GYEVHGLIRRSS   35 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHC---CCEEEEEecCCc
Confidence            57999999999999999999997   689999998753

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.92  E-value=2.3e-09  Score=69.12  Aligned_cols=35  Identities=34%  Similarity=0.535  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .|+|+||||+||||++++++|++.   +++|++++|..
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~---G~~V~~ldr~~  154 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGR---GDEVIVIDNFF  154 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            478999999999999999999997   68999999853

>PLN02583 cinnamoyl-CoA reductase

Probab=98.91  E-value=4.5e-09  Score=64.33  Aligned_cols=35  Identities=20%  Similarity=0.359  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+||||++++++|+++   +++|++++|+.
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~---G~~V~~~~R~~   40 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSR---GYTVHAAVQKN   40 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEEcCc
Confidence            578999999999999999999997   68999999864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=98.89  E-value=5.8e-09  Score=64.09  Aligned_cols=37  Identities=24%  Similarity=0.353  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+||||+||||++++++|+++   +++|+++.|+..
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   40 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLR---GYTVKATVRDLT   40 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCCc
Confidence            4689999999999999999999997   688998888755

>PLN02650 dihydroflavonol-4-reductase

Probab=98.89  E-value=5e-09  Score=65.16  Aligned_cols=37  Identities=32%  Similarity=0.525  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++|+||||+||||++++++|++.   +++|++++|+..
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~---G~~V~~~~r~~~   40 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLER---GYTVRATVRDPA   40 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHC---CCEEEEEEcCcc
Confidence            3568999999999999999999997   689999988754

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.89  E-value=4.2e-09  Score=66.40  Aligned_cols=36  Identities=22%  Similarity=0.233  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|+||||+||||+++++.|+++   +++|++++|..
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~---G~~V~~v~r~~   55 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAE---GHYIIASDWKK   55 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhC---CCEEEEEEecc
Confidence            5789999999999999999999997   68999999854

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.87  E-value=8.1e-09  Score=63.31  Aligned_cols=33  Identities=24%  Similarity=0.152  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+||||||+||||++++++|++.   + +|++++|..
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~---g-~V~~~~~~~   33 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPL---G-NLIALDVHS   33 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhcc---C-CEEEecccc
Confidence            57999999999999999999987   4 688888864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.87  E-value=4.6e-09  Score=65.03  Aligned_cols=38  Identities=26%  Similarity=0.204  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++||||+||||++++++|+++   +++|++++|.+.
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~---G~~V~~~~r~~~   41 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSK---GYEVHGIIRRSS   41 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEecccc
Confidence            45789999999999999999999997   679999988643

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.86  E-value=5.6e-09  Score=63.30  Aligned_cols=34  Identities=38%  Similarity=0.642  Sum_probs=31.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+||||+||||+++++.|+++   +++|+.++|...
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~---g~~V~~~~r~~~   35 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAA---GHDVRGLDRLRD   35 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhC---CCeEEEEeCCCc
Confidence            4999999999999999999997   789999998654

>PLN02214 cinnamoyl-CoA reductase

Probab=98.85  E-value=6.2e-09  Score=64.91  Aligned_cols=38  Identities=21%  Similarity=0.296  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|+||||+||||+++++.|+++   +++|++++|+.+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~   45 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLER---GYTVKGTVRNPD   45 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCch
Confidence            46789999999999999999999997   689999998754

>KOG1429|consensus

Probab=98.84  E-value=7.2e-09  Score=64.29  Aligned_cols=37  Identities=32%  Similarity=0.530  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++|+||||.||||+||++.|+..   +++|+++|--.
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~e---gh~VIa~Dn~f   61 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTE---GHEVIALDNYF   61 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhc---CCeEEEEeccc
Confidence            45689999999999999999999997   69999998643

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.83  E-value=6.5e-09  Score=63.90  Aligned_cols=37  Identities=35%  Similarity=0.659  Sum_probs=30.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +|+|||||||+|++++++|++++. ..+|++++|+.+.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~-~~~V~~l~R~~~~   37 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRST-QAKVICLVRAASE   37 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCC-CCEEEEEEccCCH
Confidence            489999999999999999999721 1579999997653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.83  E-value=7.1e-09  Score=64.58  Aligned_cols=37  Identities=32%  Similarity=0.493  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+|+|+||||+||||++++++|+++   +++|++++|+.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~---G~~V~~~~r~~   44 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQR---GYTVHATLRDP   44 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            35789999999999999999999997   67899888864

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.82  E-value=1.4e-08  Score=61.29  Aligned_cols=47  Identities=21%  Similarity=0.403  Sum_probs=36.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      +|+||||+||+|++++++|+++   +++|++++|...+....+.+.+.++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~---g~~v~~~~r~~~d~~~~~~~~~~~~   47 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPE---GRVVVALTSSQLDLTDPEALERLLR   47 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhc---CCEEEEeCCcccCCCCHHHHHHHHH
Confidence            4899999999999999999997   6899999997554444455554443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.80  E-value=1.2e-08  Score=62.63  Aligned_cols=37  Identities=30%  Similarity=0.400  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+||||+++++.|+++   +++|++++|+..
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~---G~~V~~~~r~~~   40 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFR---GYTINATVRDPK   40 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEEcCCc
Confidence            3689999999999999999999997   678988888754

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.80  E-value=1.1e-08  Score=63.61  Aligned_cols=35  Identities=26%  Similarity=0.436  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|++..  +++|++++|+.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~--~~~V~~~~r~~   36 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETT--DWEVYGMDMQT   36 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCC--CCeEEEEeCcH
Confidence            579999999999999999999852  47899998853

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.79  E-value=7.1e-09  Score=63.83  Aligned_cols=34  Identities=35%  Similarity=0.620  Sum_probs=31.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      |+|||||||||++++..|.+.   +|+|++++|++..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~---gh~v~iltR~~~~   34 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKG---GHQVTILTRRPPK   34 (297)
T ss_pred             CeEeccccchhHHHHHHHHhC---CCeEEEEEcCCcc
Confidence            689999999999999999997   7999999998763

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.78  E-value=1e-08  Score=61.69  Aligned_cols=34  Identities=38%  Similarity=0.716  Sum_probs=30.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      |+||||+||||+++++.|+++   +++|++++|++..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKD---GHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHc---CCEEEEEeCCCCC
Confidence            689999999999999999997   6899999997654

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.78  E-value=1.4e-08  Score=62.98  Aligned_cols=40  Identities=40%  Similarity=0.719  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+||||++++++|++++ .+++|++++|+..
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g-~~~~V~~~~r~~~   41 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENY-NPKKIIIYSRDEL   41 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhC-CCcEEEEEcCChh
Confidence            467899999999999999999999872 1268888888643

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02240 UDP-glucose 4-epimerase

Probab=98.77  E-value=1.9e-08  Score=62.29  Aligned_cols=37  Identities=27%  Similarity=0.388  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++|+||||+||+|++++++|+++   +++|++++|..
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~~~~   39 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLA---GYKVVVIDNLD   39 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            45689999999999999999999997   58999998753

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.75  E-value=1.8e-08  Score=57.39  Aligned_cols=33  Identities=42%  Similarity=0.659  Sum_probs=30.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||++|++++++|+++   +++|+++.|++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~---~~~V~~~~R~~~   33 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRR---GHEVTALVRSPS   33 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT---TSEEEEEESSGG
T ss_pred             eEEECCCChHHHHHHHHHHHC---CCEEEEEecCch
Confidence            789999999999999999998   589999999865

...

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.75  E-value=2.4e-08  Score=58.39  Aligned_cols=33  Identities=36%  Similarity=0.721  Sum_probs=29.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+||||+||||++++++|+++   ++.|+.+.|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~---g~~v~~~~~~~~   33 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKK---GHEVIVLSRSSN   33 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT---TTEEEEEESCST
T ss_pred             EEEEccCCHHHHHHHHHHHHc---CCcccccccccc
Confidence            799999999999999999998   678888888765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02686 cinnamoyl-CoA reductase

Probab=98.75  E-value=2e-08  Score=63.27  Aligned_cols=37  Identities=32%  Similarity=0.515  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++++|+||||+||||+++++.|+++   +++|+++.|+.
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~---G~~V~~~~r~~   87 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRH---GYSVRIAVDTQ   87 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68998887764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.74  E-value=2.3e-08  Score=63.64  Aligned_cols=38  Identities=32%  Similarity=0.597  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|+||||+||||++++++|+++   +++|++++|+..
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~---G~~V~~l~R~~~   95 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRR---GYNVVAVAREKS   95 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEEechh
Confidence            45679999999999999999999997   689999999764

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.72  E-value=1.9e-08  Score=59.98  Aligned_cols=35  Identities=37%  Similarity=0.561  Sum_probs=32.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||||++|++++++|+.+   +++|.++.|++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~---~~~v~~~~r~~~   35 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLAR---GHEVRAAVRNPE   35 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhC---CCEEEEEEeCHH
Confidence            47999999999999999999998   789999999865

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.72  E-value=2.8e-08  Score=66.52  Aligned_cols=39  Identities=28%  Similarity=0.585  Sum_probs=33.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++.|+|+||||+||||+++++.|++..+ +++|++++|.
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~-~~~V~~~d~~   41 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYP-DYKIVVLDKL   41 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCC-CCEEEEEeCC
Confidence            46789999999999999999999998632 3689888874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.72  E-value=2.3e-08  Score=59.59  Aligned_cols=38  Identities=13%  Similarity=0.183  Sum_probs=33.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||++++++|+++   +++|++++|++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~---G~~v~~~~r~~   42 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAE---GARVVLVDRSE   42 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCch
Confidence            367889999999999999999999997   67899998864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.71  E-value=2.3e-08  Score=60.56  Aligned_cols=34  Identities=26%  Similarity=0.341  Sum_probs=30.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+||||||++|++++++|+++   +++|++++|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~---g~~V~~~~R~~~   34 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAA---SVPFLVASRSSS   34 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhC---CCcEEEEeCCCc
Confidence            4899999999999999999997   689999999865

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.71  E-value=2.7e-08  Score=58.92  Aligned_cols=38  Identities=18%  Similarity=0.172  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|++|++++++|+++   +++|++++|++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~---g~~v~~~~r~~~   39 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKE---GAKVVIADLNDE   39 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            45789999999999999999999997   689999999754

>PRK06194 hypothetical protein; Provisional

Probab=98.71  E-value=3.1e-08  Score=59.85  Aligned_cols=38  Identities=8%  Similarity=0.005  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+..
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~---G~~V~~~~r~~~   41 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAAL---GMKLVLADVQQD   41 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            45689999999999999999999997   678999988643

>PLN02778 3,5-epimerase/4-reductase

Probab=98.71  E-value=3.6e-08  Score=60.65  Aligned_cols=32  Identities=22%  Similarity=0.139  Sum_probs=27.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .|+|+||||+||||+++++.|+++   +++|+...
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~---g~~V~~~~   40 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQ---GIDFHYGS   40 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC---CCEEEEec
Confidence            478999999999999999999997   57776543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.70  E-value=3e-08  Score=61.79  Aligned_cols=33  Identities=27%  Similarity=0.550  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+||||||+||||+|.+.+|++.   +++|+++|.-
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~---G~~vvV~DNL   33 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKT---GHEVVVLDNL   33 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHC---CCeEEEEecC
Confidence            57999999999999999999997   7899999874

>PRK05717 oxidoreductase; Validated

Probab=98.69  E-value=3.3e-08  Score=58.94  Aligned_cols=39  Identities=18%  Similarity=0.048  Sum_probs=34.0

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~---g~~v~~~~~~~   44 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAE---GWQVVLADLDR   44 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHc---CCEEEEEcCCH
Confidence            3467899999999999999999999997   67898888764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.69  E-value=4.7e-08  Score=59.92  Aligned_cols=48  Identities=27%  Similarity=0.380  Sum_probs=38.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      |+||||||+|++|+++.+.|.++   ++.|+.+.|..-+....+.+..++.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~---~~~v~~~~r~~~dl~d~~~~~~~~~   48 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKER---GYEVIATSRSDLDLTDPEAVAKLLE   48 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTT---SEEEEEESTTCS-TTSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhC---CCEEEEeCchhcCCCCHHHHHHHHH
Confidence            68999999999999999999986   5789998887666555566655544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.69  E-value=3.9e-08  Score=58.07  Aligned_cols=38  Identities=13%  Similarity=0.235  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|++|.+++++|+++   +++|++++|++.
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~---G~~V~~~~r~~~   40 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAE---GARVVVTDRNEE   40 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999987   678999999864

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.69  E-value=6.2e-08  Score=56.68  Aligned_cols=38  Identities=18%  Similarity=0.249  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~---G~~v~~~~r~~~   42 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAAR---GARVALIGRGAA   42 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHC---CCeEEEEeCChH
Confidence            56789999999999999999999987   678999999653

>PRK09135 pteridine reductase; Provisional

Probab=98.69  E-value=7.7e-08  Score=56.68  Aligned_cols=37  Identities=19%  Similarity=0.166  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++||||+|+||++++++|++.   +++|++++|+.
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~---g~~v~~~~r~~   40 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAA---GYRVAIHYHRS   40 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            34678999999999999999999997   68999998864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.68  E-value=3.8e-08  Score=58.87  Aligned_cols=38  Identities=32%  Similarity=0.424  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|+||||+|++|++++++|++.   +++|+++.|+++
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~---g~~V~~~~R~~~   52 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAK---GFAVKAGVRDVD   52 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhC---CCEEEEEecCHH
Confidence            45689999999999999999999997   689999988643

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.68  E-value=4.6e-08  Score=60.29  Aligned_cols=33  Identities=30%  Similarity=0.479  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+++||||+||||+++++.|+++   +++|++++|.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~~~   33 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQN---GHDVVILDNL   33 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHC---CCeEEEEecC
Confidence            57999999999999999999997   6889988764

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.68  E-value=5e-08  Score=57.74  Aligned_cols=37  Identities=22%  Similarity=0.175  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~---G~~V~~~~r~~   40 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGA---GAHVVVNYRQK   40 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            45689999999999999999999987   67899888864

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.68  E-value=3.3e-08  Score=65.59  Aligned_cols=36  Identities=36%  Similarity=0.696  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|++. ..+++|++++|+.
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~-~~g~~V~~l~R~~   36 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDR-RREATVHVLVRRQ   36 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhc-CCCCEEEEEECcc
Confidence            47999999999999999999952 1268999999964

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.68  E-value=1.1e-07  Score=55.76  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|++|+++++.|++.   +++|+++.|+..
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~---G~~v~~~~~~~~   40 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQ---GANVVINYASSE   40 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            46789999999999999999999997   678888887643

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.68  E-value=4.5e-08  Score=57.73  Aligned_cols=38  Identities=16%  Similarity=0.157  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|++|.+++++|+++   +++|++++|+..
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~---g~~V~~~~r~~~   41 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAAD---GAEVIVVDICGD   41 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            45789999999999999999999997   679999999743

>PRK12320 hypothetical protein; Provisional

Probab=98.67  E-value=3.9e-08  Score=66.67  Aligned_cols=34  Identities=26%  Similarity=0.338  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|.+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~---G~~Vi~ldr~~   34 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAA---GHTVSGIAQHP   34 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEeCCh
Confidence            47999999999999999999997   68999999854

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.67  E-value=4.3e-08  Score=59.81  Aligned_cols=35  Identities=34%  Similarity=0.590  Sum_probs=31.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+||+|+++++.|++.   +++|++++|++.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~---g~~V~~~~r~~~   35 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQ---GEEVRVLVRPTS   35 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHC---CCEEEEEEecCc
Confidence            47999999999999999999987   589999999754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK09186 flagellin modification protein A; Provisional

Probab=98.66  E-value=8.8e-08  Score=56.86  Aligned_cols=38  Identities=29%  Similarity=0.522  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~---g~~v~~~~r~~~   39 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEA---GGIVIAADIDKE   39 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecChH
Confidence            56789999999999999999999997   678998888654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.66  E-value=9.5e-08  Score=56.79  Aligned_cols=38  Identities=24%  Similarity=0.248  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++.
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~---G~~v~~~~r~~~   42 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARA---GAAVAIADLNQD   42 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCChH
Confidence            45789999999999999999999997   678999988763

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.65  E-value=5.5e-08  Score=57.88  Aligned_cols=40  Identities=15%  Similarity=0.233  Sum_probs=34.9

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~---g~~V~~~~r~~~   46 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEA---GARVHVCDVSEA   46 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            3467899999999999999999999987   678999998653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.65  E-value=7.4e-08  Score=58.85  Aligned_cols=31  Identities=32%  Similarity=0.537  Sum_probs=25.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+||||+||||++++++|++.   +++++++.|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~---g~~~v~~~~~   32 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDK---GITDILVVDN   32 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhC---CCceEEEecC
Confidence            799999999999999999997   5655555544

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.64  E-value=6.2e-08  Score=57.32  Aligned_cols=38  Identities=21%  Similarity=0.367  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|++.   +++|++++|+..
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~vi~~~r~~~   41 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALARE---GASVVVADINAE   41 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999997   689999998753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.64  E-value=6.7e-08  Score=56.68  Aligned_cols=37  Identities=19%  Similarity=0.262  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++||||+|++|.+++++|+++   +++|++++|++.
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~---g~~v~~~~r~~~   40 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAAD---GAKVVIYDSNEE   40 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            4578999999999999999999987   678999998754

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.64  E-value=6.2e-08  Score=57.56  Aligned_cols=38  Identities=16%  Similarity=0.247  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~---G~~V~~~~r~~~   40 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARA---GADVVLAARTAE   40 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            56789999999999999999999997   679999998653

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.63  E-value=7e-08  Score=57.54  Aligned_cols=38  Identities=16%  Similarity=0.156  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|+..
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~---G~~v~~~~r~~~   42 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAE---GATVVVGDIDPE   42 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            67889999999999999999999997   689999988643

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.63  E-value=7.9e-08  Score=57.22  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|++.
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~---G~~V~~~~r~~~   45 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQA---GAEVILNGRDPA   45 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            57899999999999999999999997   678999988753

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.62  E-value=8.8e-08  Score=57.44  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~---g~~V~~~~r~~~   39 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARA---GYRVFGTSRNPA   39 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            4578999999999999999999997   689999999743

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.62  E-value=7.1e-08  Score=58.30  Aligned_cols=37  Identities=22%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~~   39 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAA---GHRVVGTVRSEA   39 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhC---cCEEEEEeCCHH
Confidence            3578999999999999999999987   689999998643

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.62  E-value=8.4e-08  Score=56.77  Aligned_cols=37  Identities=22%  Similarity=0.125  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|+.
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~vi~~~r~~   39 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEA---GADIVGAGRSE   39 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCch
Confidence            56899999999999999999999997   67999998864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.61  E-value=9.7e-08  Score=56.42  Aligned_cols=38  Identities=18%  Similarity=0.336  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +.+|++++|+..
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~---g~~v~~~~r~~~   38 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEE---GAKVAVFDLNRE   38 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCHH
Confidence            35789999999999999999999997   678999888653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN00016 RNA-binding protein; Provisional

Probab=98.61  E-value=5.9e-08  Score=61.19  Aligned_cols=36  Identities=25%  Similarity=0.563  Sum_probs=32.7

Q ss_pred             CCeEEEE----cCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVT----GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilit----Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+||    ||+||||++++++|+++   +++|++++|+..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~---G~~V~~l~R~~~   91 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKA---GHEVTLFTRGKE   91 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHC---CCEEEEEecCCc
Confidence            4689999    99999999999999997   689999999764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.61  E-value=1.7e-07  Score=57.49  Aligned_cols=39  Identities=21%  Similarity=0.280  Sum_probs=35.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...+++++|||||+.||..+++.|.++   +++|+++.|+.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~---g~~liLvaR~~~   41 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARR---GYNLILVARRED   41 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCcHH
Confidence            356789999999999999999999998   789999999865

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.61  E-value=8.7e-08  Score=57.73  Aligned_cols=37  Identities=19%  Similarity=0.190  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++||||+|++|+++++.|+++   +++|++++|+++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~---G~~V~~~~r~~~   38 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKK---GYLVIATMRNPE   38 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence            4578999999999999999999997   689999988754

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1e-07  Score=56.74  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +.+|++++|+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~---G~~v~~~~r~~~   42 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEE---GAIPVIFGRSAP   42 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHc---CCcEEEEcCChh
Confidence            66889999999999999999999997   678888888765

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.60  E-value=9.8e-08  Score=56.90  Aligned_cols=38  Identities=26%  Similarity=0.351  Sum_probs=33.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|.+.   +++|++++|+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~r~~   43 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEA---GARVVTTARSR   43 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHC---CCEEEEEeCCh
Confidence            367899999999999999999999987   67899999864

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.59  E-value=1.2e-07  Score=56.24  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=35.7

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...+++++++||||+|+||.+++++|++.   +.+|++++|+..
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~---G~~Vi~~~r~~~   47 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARH---GATVILLGRTEE   47 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHC---CCcEEEEeCCHH
Confidence            34678899999999999999999999997   579999998753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.59  E-value=2.1e-07  Score=54.56  Aligned_cols=37  Identities=22%  Similarity=0.279  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|++|++++++|+++   +++|+++.|+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~---g~~v~~~~~~~   40 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARA---GADVVVHYRSD   40 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCC
Confidence            34579999999999999999999997   67887766654

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.59  E-value=1.4e-07  Score=56.69  Aligned_cols=38  Identities=16%  Similarity=0.307  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|++.   +++|++++|+++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~---G~~V~~~~r~~~   44 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARA---GANVAVASRSQE   44 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999987   688999998743

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.59  E-value=9.3e-08  Score=56.55  Aligned_cols=38  Identities=18%  Similarity=0.228  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|+.+
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~~   40 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFARE---GARVVVADRDAE   40 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHC---CCeEEEecCCHH
Confidence            46789999999999999999999997   678999988743

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.59  E-value=1.2e-07  Score=56.88  Aligned_cols=38  Identities=18%  Similarity=0.217  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +.+|++++|+++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~---G~~Vi~~~r~~~   45 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEA---GADVLIAARTES   45 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999997   679999998753

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.58  E-value=1.6e-07  Score=56.44  Aligned_cols=39  Identities=21%  Similarity=0.320  Sum_probs=34.6

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|+++   +.+|++++|++
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~---G~~Vi~~~r~~   48 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAK---GAKVIGLTHSK   48 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEECCc
Confidence            4567899999999999999999999997   67999988875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.58  E-value=5.9e-08  Score=59.50  Aligned_cols=34  Identities=35%  Similarity=0.599  Sum_probs=29.0

Q ss_pred             EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |||||+||+|++++++|+++.+ .++|.++++.+.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~   34 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPP   34 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccc
Confidence            6999999999999999999832 368999988654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.57  E-value=1.2e-07  Score=56.77  Aligned_cols=37  Identities=19%  Similarity=0.471  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+.
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~   39 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAE---GARVAVLDKSA   39 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   68999998864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06196 oxidoreductase; Provisional

Probab=98.57  E-value=1.5e-07  Score=57.94  Aligned_cols=38  Identities=18%  Similarity=0.205  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|+..
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~---G~~Vv~~~R~~~   61 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQA---GAHVIVPARRPD   61 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999997   689999998753

>PRK06398 aldose dehydrogenase; Validated

Probab=98.57  E-value=1.8e-07  Score=56.08  Aligned_cols=38  Identities=21%  Similarity=0.328  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+..
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~---G~~Vi~~~r~~~   41 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEE---GSNVINFDIKEP   41 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCcc
Confidence            56789999999999999999999997   689999998653

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.57  E-value=3.1e-07  Score=54.10  Aligned_cols=36  Identities=19%  Similarity=0.409  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~---g~~v~~~~~~   39 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAAD---GADVIVLDIH   39 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEcCc
Confidence            45789999999999999999999997   6788887764

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.56  E-value=1.5e-07  Score=55.54  Aligned_cols=38  Identities=24%  Similarity=0.373  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|++|++++++|+++   +++|++++|++.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~---g~~V~~~~r~~~   41 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAA---GATVILVARHQK   41 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEEeCChH
Confidence            56789999999999999999999997   678999998764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.56  E-value=1.9e-07  Score=55.75  Aligned_cols=38  Identities=21%  Similarity=0.286  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|++.   +++|++++|+.+
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~---G~~V~~~~r~~~   47 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEA---GARVVLSARKAE   47 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            46789999999999999999999987   678999988643

>PRK08264 short chain dehydrogenase; Validated

Probab=98.56  E-value=1.6e-07  Score=55.30  Aligned_cols=38  Identities=26%  Similarity=0.493  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      +++++++||||+|++|+++++.|+++   +. +|++++|+..
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~---G~~~V~~~~r~~~   42 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLAR---GAAKVYAAARDPE   42 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CcccEEEEecChh
Confidence            45789999999999999999999987   56 8999998654

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.56  E-value=1.6e-07  Score=55.86  Aligned_cols=37  Identities=24%  Similarity=0.303  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~---g~~v~~~~r~~   40 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAA---GATVVVCGRRA   40 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            56899999999999999999999997   67899998865

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.55  E-value=1.6e-07  Score=56.44  Aligned_cols=38  Identities=32%  Similarity=0.448  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~---G~~V~~~~r~~~   42 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAA---GAAVMIVGRNPD   42 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            56789999999999999999999997   679999998643

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.55  E-value=1.4e-07  Score=56.19  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||.++++.|+++   +++|++++|+..
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~   41 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAE---GARVVIADIKPA   41 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEcCCHH
Confidence            45789999999999999999999997   689999988654

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.55  E-value=2.2e-07  Score=54.54  Aligned_cols=37  Identities=24%  Similarity=0.186  Sum_probs=32.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++||||+|+||++++++|+++   +++|++++|+..
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~---G~~v~~~~r~~~   38 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANL---GHQVIGIARSAI   38 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            4678999999999999999999987   689999998654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.55  E-value=2.1e-07  Score=55.39  Aligned_cols=38  Identities=18%  Similarity=0.151  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~---G~~v~~~~r~~~   46 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGA---GAHVLVNGRNAA   46 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc---CCeEEEEeCCHH
Confidence            67899999999999999999999987   679999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=98.55  E-value=1.6e-07  Score=57.47  Aligned_cols=38  Identities=18%  Similarity=0.142  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|+..
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~---G~~vi~~~r~~~   51 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAK---GAHVVLAVRNLD   51 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999997   678999888643

>PRK07063 short chain dehydrogenase; Provisional

Probab=98.55  E-value=2.3e-07  Score=55.35  Aligned_cols=38  Identities=21%  Similarity=0.197  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~---G~~vv~~~r~~~   42 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFARE---GAAVALADLDAA   42 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999997   678999988643

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.55  E-value=2.1e-07  Score=57.84  Aligned_cols=32  Identities=28%  Similarity=0.691  Sum_probs=26.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r   48 (67)
                      ++|+||||+||||+++++.|+++   ++. +.+++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~---g~~~v~~~~~   34 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINE---TSDAVVVVDK   34 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHc---CCCEEEEEec
Confidence            57999999999999999999997   444 444454

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.54  E-value=1.7e-07  Score=55.09  Aligned_cols=38  Identities=29%  Similarity=0.383  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|++|++++++|+++   +.+|++++|++.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~---g~~V~~~~r~~~   41 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAE---GYKVAITARDQK   41 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEeeCCHH
Confidence            34689999999999999999999987   578999998753

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.54  E-value=1.5e-07  Score=55.69  Aligned_cols=36  Identities=17%  Similarity=0.114  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|++|++++++|+++   +++|++++|++.
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~---g~~v~~~~r~~~   36 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAA---GANVVVNDLGEA   36 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            368999999999999999999997   678999999753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.54  E-value=1.9e-07  Score=55.10  Aligned_cols=38  Identities=16%  Similarity=0.236  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|++.
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~---G~~Vi~~~r~~~   42 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKE---GVNVGLLARTEE   42 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            45789999999999999999999987   679999998753

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.54  E-value=2.3e-07  Score=56.09  Aligned_cols=38  Identities=16%  Similarity=0.233  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +.+|++++|+..
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   41 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARD---GANIVIAAKTAE   41 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecccc
Confidence            46789999999999999999999987   679999998754

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.54  E-value=1.9e-07  Score=55.48  Aligned_cols=38  Identities=16%  Similarity=0.269  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+..
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~---G~~Vi~~~r~~~   50 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAK---GARVALLDRSED   50 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999987   678999988643

>PRK06182 short chain dehydrogenase; Validated

Probab=98.54  E-value=2e-07  Score=56.15  Aligned_cols=37  Identities=24%  Similarity=0.247  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||++++++|++.   +++|++++|+.+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~~   38 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQ---GYTVYGAARRVD   38 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            4679999999999999999999987   689999998743

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.53  E-value=2e-07  Score=62.18  Aligned_cols=39  Identities=23%  Similarity=0.245  Sum_probs=34.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...+++++||||+|+||++++++|++.   +++|++++|+..
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~---G~~Vval~Rn~e  115 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSAQ  115 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            346789999999999999999999997   689999999754

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.53  E-value=1.9e-07  Score=55.28  Aligned_cols=35  Identities=20%  Similarity=0.357  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|+||.++++.|++.   +++|++++|+++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~---G~~Vi~~~r~~~   36 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAA---GARLYLAARDVE   36 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhc---CCEEEEEeCCHH
Confidence            58999999999999999999987   679999999754

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.2e-07  Score=55.90  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||++++++|+++   +++|++++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~---g~~v~~~~r~~   36 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLAR---GDRVAATVRRP   36 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57999999999999999999997   67899988864

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.53  E-value=2.1e-07  Score=54.68  Aligned_cols=38  Identities=13%  Similarity=0.188  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|++.   +.+|++++|++.
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~---G~~V~~~~r~~~   40 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKE---GAQVCINSRNEN   40 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            45789999999999999999999987   679999998653

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.1e-07  Score=54.94  Aligned_cols=37  Identities=27%  Similarity=0.310  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~---g~~v~~~~r~~   40 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAE---GARVAITGRDP   40 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCCH
Confidence            45789999999999999999999997   57898888863

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.53  E-value=1.8e-07  Score=58.38  Aligned_cols=34  Identities=35%  Similarity=0.674  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |++|||||+||||++++++++...++ .+|+++++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~Dk   34 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDK   34 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEec
Confidence            57999999999999999999998665 57888887

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.53  E-value=1.6e-07  Score=56.04  Aligned_cols=37  Identities=14%  Similarity=0.150  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~---G~~Vv~~~r~~   40 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARH---GANLILLDISP   40 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEecCCH
Confidence            45789999999999999999999997   67899998874

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.53  E-value=1.9e-07  Score=62.01  Aligned_cols=45  Identities=27%  Similarity=0.406  Sum_probs=39.0

Q ss_pred             chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490          6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus         6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+..++++|+|+||||+|-||+.+|+++++.+  ..+|++++|++.+
T Consensus       243 ~i~~~~~gK~vLVTGagGSiGsel~~qil~~~--p~~i~l~~~~E~~  287 (588)
T COG1086         243 LIGAMLTGKTVLVTGGGGSIGSELCRQILKFN--PKEIILFSRDEYK  287 (588)
T ss_pred             HHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcC--CCEEEEecCchHH
Confidence            45567899999999999999999999999984  4689999998653

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.6e-07  Score=54.88  Aligned_cols=38  Identities=18%  Similarity=0.230  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++++|+++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~---G~~Vi~~~r~~~   44 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQA---GAKVVLASRRVE   44 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999987   578999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.53  E-value=2.5e-07  Score=55.33  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|+++   +++|++++|++.
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~---G~~V~~~~r~~~   40 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAA---GARLLLVGRNAE   40 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            35789999999999999999999997   689999998743

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.52  E-value=2e-07  Score=55.03  Aligned_cols=38  Identities=16%  Similarity=0.122  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~---G~~v~~~~r~~~   42 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEA---GATVAFNDGLAA   42 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            56789999999999999999999997   678988888643

>PRK06172 short chain dehydrogenase; Provisional

Probab=98.52  E-value=1.9e-07  Score=55.50  Aligned_cols=38  Identities=24%  Similarity=0.318  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +.+|++++|+++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~---G~~v~~~~r~~~   42 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFARE---GAKVVVADRDAA   42 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            56789999999999999999999987   678999998754

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.52  E-value=2.9e-07  Score=56.88  Aligned_cols=38  Identities=21%  Similarity=0.299  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+++||.++++.|+++   +.+|+++.|+.+
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~---G~~Vil~~R~~~   49 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAA---GAEVILPVRNRA   49 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57899999999999999999999997   689999998754

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.52  E-value=2.7e-07  Score=56.54  Aligned_cols=38  Identities=18%  Similarity=0.340  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|++.   +++|++++|+.+
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~---G~~Vi~~~R~~~   75 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARR---GATVVAVARRED   75 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999987   689999999753

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.52  E-value=2.4e-07  Score=54.80  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|+||++++++|++.   +++|++++|+..
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~---G~~v~~~~r~~~   36 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQP---GIAVLGVARSRH   36 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhC---CCEEEEEecCcc
Confidence            57999999999999999999987   678999888643

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.51  E-value=2.6e-07  Score=55.76  Aligned_cols=36  Identities=17%  Similarity=0.250  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||++++++|+++   +++|++++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~---g~~V~~~~r~~~   38 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALER---GDRVVATARDTA   38 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            578999999999999999999987   678999998743

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.51  E-value=2.3e-07  Score=55.78  Aligned_cols=38  Identities=21%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~---G~~v~~~~r~~~   40 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAAL---GARVAIGDLDEA   40 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            45689999999999999999999987   678988888643

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.51  E-value=2.5e-07  Score=55.20  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||.++++.|++.   +++|++++|+
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~   48 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKA---GADIIITTHG   48 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56899999999999999999999997   6889988886

>PRK07035 short chain dehydrogenase; Provisional

Probab=98.51  E-value=3.1e-07  Score=54.55  Aligned_cols=38  Identities=18%  Similarity=0.215  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|++.   +++|++++|+..
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~---G~~Vi~~~r~~~   43 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQ---GAHVIVSSRKLD   43 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999997   679999998643

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.50  E-value=6.9e-07  Score=53.30  Aligned_cols=38  Identities=13%  Similarity=0.114  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.+
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~---G~~v~~~~r~~~   43 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQA---GADVALFDLRTD   43 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            56889999999999999999999997   679999998653

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.50  E-value=2.6e-07  Score=55.40  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   41 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAA---GARVAIVDIDAD   41 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999997   679999998753

>PRK06128 oxidoreductase; Provisional

Probab=98.50  E-value=4.1e-07  Score=55.69  Aligned_cols=37  Identities=16%  Similarity=0.169  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++..++.
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~---G~~V~i~~~~~   89 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFARE---GADIALNYLPE   89 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHc---CCEEEEEeCCc
Confidence            56789999999999999999999997   67887776653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.50  E-value=2.9e-07  Score=55.08  Aligned_cols=37  Identities=22%  Similarity=0.434  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~   40 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAE---GARVAVLERSA   40 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   67899999864

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.50  E-value=4.1e-07  Score=54.47  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|+++++++.
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~---G~~v~~~~~~~~   44 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLAN---GANVVNADIHGG   44 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            56889999999999999999999997   688988888653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.50  E-value=2.7e-07  Score=54.90  Aligned_cols=35  Identities=20%  Similarity=0.287  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|++|.++++.|+++   +++|++++|++.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~   35 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQ---GHKVIATGRRQE   35 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            57999999999999999999987   679999998753

>PLN02253 xanthoxin dehydrogenase

Probab=98.50  E-value=3.3e-07  Score=55.26  Aligned_cols=38  Identities=18%  Similarity=0.204  Sum_probs=33.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||++++++|++.   +++|++++|..
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~---G~~v~~~~~~~   52 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKH---GAKVCIVDLQD   52 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            356789999999999999999999997   68999988764

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.49  E-value=3.3e-07  Score=54.43  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+|+||++++++|++.   +++|++++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~---G~~v~~~~r~~   36 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARK---GHNVIAGVQIA   36 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            358999999999999999999997   67999998864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.49  E-value=3.4e-07  Score=54.36  Aligned_cols=34  Identities=26%  Similarity=0.139  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||++++++|+++   +.+|++++|..
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~---g~~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAA---GFDLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecCc
Confidence            67999999999999999999997   57899988864

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.49  E-value=7.2e-07  Score=54.55  Aligned_cols=39  Identities=21%  Similarity=0.264  Sum_probs=33.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||.+++++|++.   +.+|++++|+..
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~---G~~V~l~~r~~~   81 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKE---GADIAIVYLDEH   81 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            456789999999999999999999997   678988888653

>PRK05867 short chain dehydrogenase; Provisional

Probab=98.49  E-value=2.5e-07  Score=55.06  Aligned_cols=38  Identities=18%  Similarity=0.228  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+..
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   44 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEA---GAQVAIAARHLD   44 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            56889999999999999999999997   678999888643

>PRK07478 short chain dehydrogenase; Provisional

Probab=98.49  E-value=2.7e-07  Score=54.92  Aligned_cols=38  Identities=13%  Similarity=0.218  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|++.   +++|++++|+++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~---G~~v~~~~r~~~   41 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFARE---GAKVVVGARRQA   41 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999997   678999998754

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.49  E-value=3.5e-07  Score=56.43  Aligned_cols=38  Identities=18%  Similarity=0.277  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++++||||+|+||.++++.|+++   +++|++++|+..
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~---G~~V~~~~r~~~   41 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKR---GWHVIMACRNLK   41 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            35789999999999999999999997   678999988643

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.49  E-value=2.8e-07  Score=55.76  Aligned_cols=36  Identities=19%  Similarity=0.264  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|.+.   +++|++++|+++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~---G~~Vi~~~r~~~   39 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSD---GWRVFATCRKEE   39 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            568999999999999999999987   689999998753

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.48  E-value=3.1e-07  Score=54.97  Aligned_cols=38  Identities=26%  Similarity=0.371  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+++
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~---G~~V~~~~r~~~   43 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEA---GASVAICGRDEE   43 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            56889999999999999999999997   678999999754

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.48  E-value=4.2e-07  Score=53.56  Aligned_cols=37  Identities=19%  Similarity=0.294  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|++|+++++.|+++   +++|++++|++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~---g~~V~~~~r~~   43 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQR---GARVVAAARNA   43 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   67899999865

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.48  E-value=3.7e-07  Score=54.11  Aligned_cols=34  Identities=24%  Similarity=0.251  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||.+++++|+++   +++|++++|++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~---G~~V~~~~r~~   35 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQ---GWQVIACGRNQ   35 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhC---CCEEEEEECCH
Confidence            57999999999999999999997   67899999864

>PRK08589 short chain dehydrogenase; Validated

Probab=98.47  E-value=4.1e-07  Score=54.91  Aligned_cols=36  Identities=11%  Similarity=0.075  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+++||+++++.|++.   +++|++++|+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~---G~~vi~~~r~   39 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQE---GAYVLAVDIA   39 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCc
Confidence            46789999999999999999999997   6899999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.47  E-value=3.1e-07  Score=54.63  Aligned_cols=38  Identities=26%  Similarity=0.211  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||.+++++|+++   +++|++.+|+..
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~---G~~vvl~~r~~~   44 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEY---GAEIIINDITAE   44 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcCCHH
Confidence            46889999999999999999999997   679999888743

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.47  E-value=4e-07  Score=53.93  Aligned_cols=37  Identities=11%  Similarity=0.106  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~---G~~v~~~~~~~   42 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEA---GAKVIGFDQAF   42 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEecch
Confidence            56789999999999999999999997   67899988865

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.47  E-value=4.1e-07  Score=55.23  Aligned_cols=38  Identities=18%  Similarity=0.208  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++.+|+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~---G~~Vv~~~r~~~   41 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARR---GARVVLGDVDKP   41 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999997   678988888643

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.47  E-value=5.1e-07  Score=53.00  Aligned_cols=36  Identities=25%  Similarity=0.297  Sum_probs=32.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ++++||||+|++|++++++|++.   +++|++++|++..
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~~   37 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLER---GWQVTATVRGPQQ   37 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhC---CCEEEEEeCCCcc
Confidence            57999999999999999999987   6799999998653

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.46  E-value=4.9e-07  Score=54.23  Aligned_cols=38  Identities=18%  Similarity=0.327  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||++++++|+++.  +.+|++++|+++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~g--g~~V~~~~r~~~   44 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNA--PARVVLAALPDD   44 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcC--CCeEEEEeCCcc
Confidence            46789999999999999999999972  379999999765

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.46  E-value=4.6e-07  Score=53.22  Aligned_cols=38  Identities=18%  Similarity=0.303  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+..
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~---G~~v~~~~r~~~   40 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQ---GAQVYGVDKQDK   40 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            56789999999999999999999987   678999888643

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.46  E-value=3.4e-07  Score=54.64  Aligned_cols=35  Identities=11%  Similarity=0.032  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|+||++++++|+++   +.+|++++|+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~---G~~V~~~~r~~~   36 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAE---GWRVGAYDINEA   36 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            57999999999999999999997   679999988654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.46  E-value=4.8e-07  Score=53.53  Aligned_cols=36  Identities=17%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|++..|+
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~---g~~v~~~~~~   39 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKE---GSLVVVNAKK   39 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            35689999999999999999999987   5777776654

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.46  E-value=3.9e-07  Score=53.80  Aligned_cols=37  Identities=16%  Similarity=0.200  Sum_probs=32.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|++|+.++++|+++   +.+|++++|++.
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~---G~~V~~~~r~~~   41 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKA---GWDLALVARSQD   41 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            4578999999999999999999997   679999999753

>KOG1371|consensus

Probab=98.45  E-value=4.3e-07  Score=57.05  Aligned_cols=49  Identities=27%  Similarity=0.405  Sum_probs=36.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC-CCCCChHHHHHHHhh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD-KKGSSPEERVKNMLN   64 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~-~~~~~~~~~~~~~~~   64 (67)
                      .++||||||+||||+|.+-+|++.   ++.|.++|.= ........+++.+..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~---gy~v~~vDNl~n~~~~sl~r~~~l~~   51 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKR---GYGVVIVDNLNNSYLESLKRVRQLLG   51 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhC---CCcEEEEecccccchhHHHHHHHhcC
Confidence            468999999999999999999998   6788888863 222344555555543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.45  E-value=4.8e-07  Score=53.55  Aligned_cols=36  Identities=19%  Similarity=0.333  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +++|++..++
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~---G~~vv~~~~~   38 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFARE---GARVVVNYHQ   38 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHC---CCeEEEEcCC
Confidence            45689999999999999999999987   5777776543

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.45  E-value=4.6e-07  Score=53.61  Aligned_cols=36  Identities=17%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||++++++|+++   +.+|++++|++.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~---g~~v~~~~r~~~   37 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAK---GRDLALCARRTD   37 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            568999999999999999999987   578999888753

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.44  E-value=3.7e-07  Score=53.68  Aligned_cols=38  Identities=18%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~~~   51 (67)
                      +.+++++||||+|+||.++++.|++.   +++|+++ +|++.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~---g~~v~~~~~r~~~   41 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKE---GAKVVIAYDINEE   41 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCCCHH
Confidence            45679999999999999999999987   5788887 77643

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.44  E-value=3.1e-07  Score=57.00  Aligned_cols=33  Identities=27%  Similarity=0.576  Sum_probs=26.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|+||||+||||+++++.|++.+  ...|+.+++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g--~~~v~~~~~   33 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNT--QDSVVNVDK   33 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhC--CCeEEEecC
Confidence            479999999999999999999972  224555554

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.44  E-value=4.4e-07  Score=54.65  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|+||+++++.|++.   +++|++++|+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~   35 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAA---GYEVWATARKA   35 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57999999999999999999987   68999999864

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.44  E-value=5.2e-07  Score=53.46  Aligned_cols=34  Identities=18%  Similarity=0.343  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||++++++|+++   +++|++++|.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~---g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEK---GTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhc---CCEEEEEeCCc
Confidence            57999999999999999999997   57899999875

>PRK07985 oxidoreductase; Provisional

Probab=98.44  E-value=8.9e-07  Score=54.25  Aligned_cols=37  Identities=24%  Similarity=0.245  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.++++.|+++   +++|++..|+.
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~---G~~Vi~~~~~~   83 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYARE---GADVAISYLPV   83 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEecCCc
Confidence            56789999999999999999999997   67888877653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.43  E-value=3.1e-07  Score=55.92  Aligned_cols=32  Identities=34%  Similarity=0.524  Sum_probs=27.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      |+||||+||||+++++.|++.   ++ .|++++|..
T Consensus         1 ilItGatG~iG~~l~~~L~~~---g~~~v~~~~~~~   33 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNER---GITDILVVDNLR   33 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHc---CCceEEEEecCC
Confidence            689999999999999999997   45 688887654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.43  E-value=4.8e-07  Score=53.87  Aligned_cols=36  Identities=25%  Similarity=0.352  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~---g~~v~~~~r~~~   37 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAA---GDRVLALDIDAA   37 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            468999999999999999999987   678999998643

>PRK08643 acetoin reductase; Validated

Probab=98.43  E-value=4.6e-07  Score=53.91  Aligned_cols=36  Identities=19%  Similarity=0.183  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||.++++.|+++   +.+|++++|+.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~---G~~v~~~~r~~~   37 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVED---GFKVAIVDYNEE   37 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            578999999999999999999987   678999988753

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.43  E-value=6.1e-07  Score=53.60  Aligned_cols=35  Identities=17%  Similarity=0.311  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++++||||+|+||+++++.|++.   +.+|++++|++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~---G~~v~~~~r~~   36 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQ---GATLGLVARRT   36 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            368999999999999999999987   67899999864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.43  E-value=5.4e-07  Score=53.70  Aligned_cols=36  Identities=22%  Similarity=0.478  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||.++++.|.+.   +++|+++.++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~---G~~v~~~~~~   40 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLRE---GAKVAVLYNS   40 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56789999999999999999999997   6788877664

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.43  E-value=6.1e-07  Score=53.26  Aligned_cols=36  Identities=22%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|.++ .|+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~---G~~v~i~~~r~   40 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLAND---GALVAIHYGRN   40 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            45689999999999999999999997   5777664 454

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.42  E-value=5.2e-07  Score=53.08  Aligned_cols=37  Identities=19%  Similarity=0.169  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +..|++.+|+.
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~---g~~v~~~~~~~   40 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQ---GAIVGLHGTRV   40 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            35789999999999999999999997   56777776653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.42  E-value=5.6e-07  Score=53.61  Aligned_cols=36  Identities=17%  Similarity=0.200  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||.++++.|++.   +++|++++|+..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~---g~~vi~~~r~~~   37 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEE---GYRVAVADINSE   37 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            468999999999999999999997   678999988653

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.42  E-value=6.5e-07  Score=53.93  Aligned_cols=38  Identities=13%  Similarity=0.160  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|.||+++++.|++.   +++|++++|+..
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~---G~~V~~~~r~~~   43 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARA---GADVILLSRNEE   43 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999997   679999998643

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.42  E-value=5.1e-07  Score=58.12  Aligned_cols=38  Identities=18%  Similarity=0.411  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|.++   +.+|++++|+++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~---G~~Vi~l~r~~~  213 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQ---GAKVVALTSNSD  213 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999987   679999988643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.41  E-value=4.8e-07  Score=53.25  Aligned_cols=38  Identities=18%  Similarity=0.322  Sum_probs=34.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   54 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~   54 (67)
                      |+|.|+||+|.+|++++++.+++   +|+|+++.|+++...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~R---GHeVTAivRn~~K~~   38 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKR---GHEVTAIVRNASKLA   38 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhC---CCeeEEEEeChHhcc
Confidence            68999999999999999999998   799999999877543

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.41  E-value=6.7e-07  Score=53.15  Aligned_cols=35  Identities=20%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||+|+||.++++.|++.   +++|++..+
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~---G~~v~~~~~   36 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYG   36 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCeEEEEcC
Confidence            46789999999999999999999987   678877653

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.41  E-value=6.8e-07  Score=53.88  Aligned_cols=37  Identities=24%  Similarity=0.486  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~---G~~V~~~~r~~   44 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARA---GAKVAILDRNQ   44 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999987   67899999864

>PRK08017 oxidoreductase; Provisional

Probab=98.41  E-value=6.1e-07  Score=53.25  Aligned_cols=35  Identities=20%  Similarity=0.159  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|+||.++++.|+++   +++|++++|+.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~---g~~v~~~~r~~~   37 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRR---GYRVLAACRKPD   37 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57999999999999999999987   578999888754

>PRK12742 oxidoreductase; Provisional

Probab=98.41  E-value=7.4e-07  Score=52.35  Aligned_cols=36  Identities=14%  Similarity=0.361  Sum_probs=30.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|+++.++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~---G~~v~~~~~~   39 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTD---GANVRFTYAG   39 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCC
Confidence            46789999999999999999999997   5678776653

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.41  E-value=7.7e-07  Score=53.79  Aligned_cols=37  Identities=16%  Similarity=0.055  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...++++||||+|+||++++++|+++   +++|++++|+.
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~---G~~V~~~~r~~   44 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAA---GFPVALGARRV   44 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            34578999999999999999999987   67888888864

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.41  E-value=4.4e-07  Score=55.02  Aligned_cols=34  Identities=32%  Similarity=0.660  Sum_probs=27.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +|+||||+||||++++++|++.++ ..+|++++|.
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~-~~~v~~~~~~   34 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHP-DAEVIVLDKL   34 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCC-CCEEEEecCC
Confidence            489999999999999999998721 2578888763

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.40  E-value=6.7e-07  Score=52.68  Aligned_cols=36  Identities=17%  Similarity=0.161  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +++|+++.|+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~---g~~v~~~~~~   38 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAAD---GFAVAVNYAG   38 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCC
Confidence            46789999999999999999999997   5677776664

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.40  E-value=6.5e-07  Score=53.45  Aligned_cols=36  Identities=19%  Similarity=0.387  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||.++++.|++.   +++|++++|++.
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~---g~~Vi~~~r~~~   36 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARA---GAQLVLAARNET   36 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            357999999999999999999987   578999998743

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.39  E-value=8.5e-07  Score=52.26  Aligned_cols=36  Identities=25%  Similarity=0.261  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   37 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQ---GQPVIVSYRTHY   37 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCch
Confidence            468999999999999999999987   679999998754

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.39  E-value=7.5e-07  Score=53.09  Aligned_cols=37  Identities=11%  Similarity=0.110  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.++++.|.++   +.+|++++|+.
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~---G~~vv~~~r~~   45 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATA---GASVVVSDINA   45 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCH
Confidence            56899999999999999999999997   67888888764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.38  E-value=8.7e-07  Score=53.08  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+++||+++++.|++.   +.+|+++.|+
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~---G~~v~~~~~~   41 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQS---GVNIAFTYNS   41 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCC
Confidence            67899999999999999999999997   6788777654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.38  E-value=8e-07  Score=53.11  Aligned_cols=37  Identities=14%  Similarity=0.054  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||++.||+++++.|++.   +.+|++++|+.
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~---G~~vv~~~~~~   42 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKA---GADIVGVGVAE   42 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEecCch
Confidence            56889999999999999999999997   67888887753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.37  E-value=1.7e-06  Score=51.14  Aligned_cols=36  Identities=22%  Similarity=0.250  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +.+|+++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~---g~~v~~~~~~   39 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQE---GAKVVINYNS   39 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEcCC
Confidence            45789999999999999999999987   5777765543

>PRK05865 hypothetical protein; Provisional

Probab=98.37  E-value=7.4e-07  Score=61.69  Aligned_cols=34  Identities=29%  Similarity=0.447  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|+++   +++|++++|+.
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~---G~~Vv~l~R~~   34 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQ---GHEVVGIARHR   34 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCc
Confidence            57999999999999999999997   68999999863

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.36  E-value=6.5e-07  Score=53.29  Aligned_cols=38  Identities=26%  Similarity=0.295  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +.+ |++++|++.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~---G~~~V~~~~r~~~   42 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAER---GAAGLVICGRNAE   42 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHC---CCCeEEEEcCCHH
Confidence            57889999999999999999999987   566 889888643

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.36  E-value=1.7e-06  Score=51.65  Aligned_cols=36  Identities=17%  Similarity=0.291  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||.++++.|++.   +.+|+++.++
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~---G~~vv~i~~~   41 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQ---GAKAVAIHYN   41 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHC---CCcEEEEecC
Confidence            46789999999999999999999987   5676676654

>PRK09242 tropinone reductase; Provisional

Probab=98.35  E-value=1.2e-06  Score=52.16  Aligned_cols=38  Identities=21%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|.||+++++.|.+.   +++|++++|+.+
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~---G~~v~~~~r~~~   44 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGL---GADVLIVARDAD   44 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            56899999999999999999999997   678999998653

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.35  E-value=2.1e-06  Score=51.34  Aligned_cols=37  Identities=16%  Similarity=0.329  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||.++++.|+++   ++.|++..|+.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~---G~~vvi~~~~~   41 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKE---KAKVVINYRSD   41 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            57899999999999999999999997   57787777743

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.35  E-value=8.8e-07  Score=52.40  Aligned_cols=36  Identities=25%  Similarity=0.281  Sum_probs=29.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEE-EEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~-~~r~   49 (67)
                      +.+++++||||+|+||++++++|++.   +++|++ ..|+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~---g~~v~~~~~r~   38 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEE---GYDIAVNYARS   38 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            35679999999999999999999997   567665 3554

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.35  E-value=1.2e-06  Score=51.10  Aligned_cols=35  Identities=17%  Similarity=0.248  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+++||||+|++|+++++.|+++    ++|++++|+..
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~----~~V~~~~r~~~   37 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT----HTLLLGGRPAE   37 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh----CCEEEEeCCHH
Confidence            468999999999999999999875    57999998753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.35  E-value=2.5e-06  Score=52.52  Aligned_cols=38  Identities=16%  Similarity=0.043  Sum_probs=33.3

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++++||||+|+||++++++|+++   +.+|++.++.
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~---Ga~Vv~~~~~   45 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARL---GATVVVNDVA   45 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCC
Confidence            3467899999999999999999999997   6788888775

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.34  E-value=1.3e-06  Score=53.44  Aligned_cols=38  Identities=16%  Similarity=0.186  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|.||.++++.|.+.   +++|++++|+..
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   44 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHAR---GAKLALVDLEEA   44 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57889999999999999999999987   678999998643

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.34  E-value=1.4e-06  Score=52.06  Aligned_cols=36  Identities=17%  Similarity=0.100  Sum_probs=30.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++||||+|+||+++++.|++.   +++|+++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~---g~~v~~~~~~   42 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAH---GFDVAVHYNR   42 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            35679999999999999999999987   5788776664

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.34  E-value=1.3e-06  Score=54.52  Aligned_cols=38  Identities=13%  Similarity=0.288  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~---G~~Vvl~~R~~~   43 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARR---GAKVVLLARGEE   43 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999997   678999998743

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.34  E-value=1.2e-06  Score=51.63  Aligned_cols=37  Identities=19%  Similarity=0.378  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|||++|+||..+++.|++.   +++|++++|++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~---G~~vi~~~r~~   39 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQK---GAKLALIDLNQ   39 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   57899988865

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.34  E-value=6.9e-07  Score=55.55  Aligned_cols=37  Identities=27%  Similarity=0.227  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++.++||||+|+||++++++|+++   +.+|++++|+++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~---G~~Vil~~R~~~   88 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARK---GLNLVLVARNPD   88 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence            4789999999999999999999997   678999999754

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.34  E-value=8.8e-07  Score=55.02  Aligned_cols=34  Identities=35%  Similarity=0.530  Sum_probs=28.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ||||||+|.||+.++++|++..  ..+|++++|++.
T Consensus         1 VLVTGa~GSIGseL~rql~~~~--p~~lil~d~~E~   34 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYG--PKKLILFDRDEN   34 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HH
T ss_pred             CEEEccccHHHHHHHHHHHhcC--CCeEEEeCCChh
Confidence            7999999999999999999974  358999999754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.33  E-value=1.6e-06  Score=52.13  Aligned_cols=35  Identities=11%  Similarity=0.232  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|+||++++++|+++   +.+|++++|+..
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~---g~~V~~~~r~~~   35 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWARE---GWRLALADVNEE   35 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            47999999999999999999997   678998888643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=98.33  E-value=1.2e-06  Score=52.55  Aligned_cols=38  Identities=13%  Similarity=0.135  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.+++++|++.   +++|++++|++.
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~---G~~vv~~~~~~~   45 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKA---GATIVFNDINQE   45 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            46789999999999999999999987   678888887653

>KOG1430|consensus

Probab=98.32  E-value=1.3e-06  Score=55.63  Aligned_cols=39  Identities=31%  Similarity=0.511  Sum_probs=32.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +..+++||||+||+|+|++++|++..+ ..+|++++..+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~-~~~irv~D~~~~   41 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENEL-KLEIRVVDKTPT   41 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhccc-ccEEEEeccCcc
Confidence            345899999999999999999999743 368999998764

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.32  E-value=1.3e-06  Score=54.57  Aligned_cols=38  Identities=16%  Similarity=0.352  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~---G~~Vvl~~R~~~   42 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARR---GARLVLAARDEE   42 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999997   678999998653

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.32  E-value=1.3e-06  Score=62.01  Aligned_cols=47  Identities=28%  Similarity=0.462  Sum_probs=36.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCCCCChHHHH
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKGSSPEERV   59 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~~~~~~~~~   59 (67)
                      .++|+||||+||+|++++++|+++.. ...+|+++.|.........++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l 1018 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERL 1018 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHH
Confidence            47899999999999999999998631 236899999976544444443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.31  E-value=1.6e-06  Score=51.63  Aligned_cols=36  Identities=25%  Similarity=0.445  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|+++   +.+|++++|+..
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~---G~~Vi~~~r~~~   36 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEE---GANVVITGRTKE   36 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            478999999999999999999997   678999988753

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.31  E-value=1.3e-06  Score=53.13  Aligned_cols=32  Identities=34%  Similarity=0.596  Sum_probs=27.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +|+||||+|+||+++++.|+++   +++|++++|.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~---g~~V~~~~~~   32 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLES---GHEVVVLDNL   32 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhC---CCeEEEEeCC
Confidence            4899999999999999999997   5788887653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK12743 oxidoreductase; Provisional

Probab=98.31  E-value=3e-06  Score=50.57  Aligned_cols=34  Identities=21%  Similarity=0.005  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++||||+|+||.++++.|++.   +++|+++.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~---G~~V~~~~~~   35 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQ---GFDIGITWHS   35 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCC
Confidence            468999999999999999999997   6788877654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.30  E-value=1.1e-06  Score=53.35  Aligned_cols=45  Identities=16%  Similarity=0.246  Sum_probs=30.2

Q ss_pred             EEEcCCChHHHHHHHHHHhhCCCcceEEEEEe-CCCCCChHHHHHHHhh
Q psy17490         17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-DKKGSSPEERVKNMLN   64 (67)
Q Consensus        17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r-~~~~~~~~~~~~~~~~   64 (67)
                      +||||+||||+++++.|++.   ++.|+++.+ ...+......+..+++
T Consensus         1 lItGa~GfiG~~l~~~L~~~---g~~v~~~~~~~~~Dl~~~~~l~~~~~   46 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEAL---GFTNLVLRTHKELDLTRQADVEAFFA   46 (306)
T ss_pred             CcccCCCcccHHHHHHHHhC---CCcEEEeeccccCCCCCHHHHHHHHh
Confidence            69999999999999999987   555555443 3333334444544443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.30  E-value=1.8e-06  Score=50.99  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=29.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++++++|||++|+||++++++|++.   +++|++..+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~---G~~vv~~~~   35 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKD---GFKVVAGCG   35 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHc---CCEEEEEcC
Confidence            5689999999999999999999997   577776543

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.29  E-value=1.4e-06  Score=51.03  Aligned_cols=35  Identities=14%  Similarity=0.241  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|+||++++++|++.   +.+|++++|++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~---G~~v~~~~r~~~   36 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRAD---GWRVIATARDAA   36 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhC---CCEEEEEECCHH
Confidence            57999999999999999999986   678999988743

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.27  E-value=1.9e-06  Score=51.52  Aligned_cols=35  Identities=23%  Similarity=0.289  Sum_probs=31.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|.||+.++++|+++   +++|++++|++.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~---G~~V~~~~r~~~   35 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKK---GARVVISSRNEE   35 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            57999999999999999999997   678999988753

>KOG1205|consensus

Probab=98.24  E-value=3e-06  Score=52.46  Aligned_cols=41  Identities=17%  Similarity=0.281  Sum_probs=35.2

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+.+|.++||||+..||.+++.+|.++   +.+++.+.|...
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~---G~~l~lvar~~r   47 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKR---GAKLVLVARRAR   47 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhC---CCceEEeehhhh
Confidence            34578999999999999999999999998   677777777654

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.24  E-value=2.8e-06  Score=52.55  Aligned_cols=37  Identities=24%  Similarity=0.266  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||++.||.++++.|++.   +.+|++++|+.
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~---G~~Vv~~~r~~   42 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAA---GATVYVTGRST   42 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeccc
Confidence            57899999999999999999999997   67899999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.24  E-value=2.7e-06  Score=50.21  Aligned_cols=34  Identities=18%  Similarity=0.313  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|.||+++++.|.++   +++|++++|+.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~---g~~v~~~~r~~   34 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRND---GHKVTLVGARR   34 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46999999999999999999987   67899998864

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.24  E-value=2.4e-06  Score=51.43  Aligned_cols=34  Identities=21%  Similarity=0.314  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||.++++.|+++   +.+|++++|++
T Consensus         1 k~vlItGas~giG~~la~~la~~---G~~vv~~~r~~   34 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQ---GAELFLTDRDA   34 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            47999999999999999999987   57888888864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.23  E-value=3.1e-06  Score=56.89  Aligned_cols=28  Identities=29%  Similarity=0.279  Sum_probs=24.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAI   43 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v   43 (67)
                      .|+||||||+||||+++++.|.++   +++|
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~---g~~v  407 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQ---GIAY  407 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhC---CCeE
Confidence            478999999999999999999886   4666

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.23  E-value=2.9e-06  Score=50.68  Aligned_cols=38  Identities=16%  Similarity=0.268  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|||++|.+|.++++.|++.   +.+|++++|++.
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~---G~~V~~~~r~~~   42 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAE---GCHLHLVARDAD   42 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            46789999999999999999999997   579999998753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.23  E-value=3.2e-06  Score=49.74  Aligned_cols=34  Identities=21%  Similarity=0.137  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||+++++.|.+.   +.+|++++|+.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~---g~~vi~~~r~~   36 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLND---GYRVIATYFSG   36 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHc---CCEEEEEeCCc
Confidence            57999999999999999999987   57899998874

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.23  E-value=3.3e-06  Score=51.54  Aligned_cols=37  Identities=14%  Similarity=0.108  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||++.||.++++.|++.   +.+|++++|+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~---G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAE---GARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeeCCc
Confidence            57899999999999999999999997   67888887754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.23  E-value=3.1e-06  Score=50.50  Aligned_cols=36  Identities=17%  Similarity=-0.021  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|||++|.||.+++++|.+.   +++|+.+++.
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~---G~~vv~~~~~   43 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEA---GCDIVGINIV   43 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEecCc
Confidence            66889999999999999999999997   6788877664

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.22  E-value=6.4e-06  Score=50.08  Aligned_cols=38  Identities=16%  Similarity=0.265  Sum_probs=34.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|.++||||+..||.++++.|.+.   |++|++..|+.+
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~---G~~vvl~aRR~d   41 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEA---GAKVVLAARREE   41 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEeccHH
Confidence            45689999999999999999999998   789999999854

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.22  E-value=2.8e-06  Score=57.50  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|+..
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~---Ga~Vvi~~r~~~  449 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAE---GAHVVLADLNLE  449 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence            56789999999999999999999997   679999998743

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.22  E-value=3.1e-06  Score=56.32  Aligned_cols=38  Identities=16%  Similarity=0.337  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||.++++.|+++   +++|++++|+++
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~---G~~V~~~~r~~~  406 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEA---GATVFLVARNGE  406 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            55789999999999999999999997   679999998753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.22  E-value=3.2e-06  Score=49.64  Aligned_cols=33  Identities=24%  Similarity=0.270  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++++||||+|+||+++++.|++.   +++|+++.|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~   33 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKD---GYRVAANCGP   33 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            57899999999999999999987   6788888873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07069 short chain dehydrogenase; Validated

Probab=98.21  E-value=5.9e-06  Score=48.82  Aligned_cols=32  Identities=13%  Similarity=0.395  Sum_probs=29.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++||||+|+||.++++.|+++   +++|++++|+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~---G~~v~~~~r~   32 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQ---GAKVFLTDIN   32 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            3899999999999999999987   6799999987

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.21  E-value=3.5e-06  Score=49.79  Aligned_cols=32  Identities=41%  Similarity=0.555  Sum_probs=29.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||+|.+|+.+++.|++.   +++|.++.|+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~---~~~V~~l~R~~   32 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSA---GFSVRALVRDP   32 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHT---TGCEEEEESSS
T ss_pred             CEEECCccHHHHHHHHHHHhC---CCCcEEEEecc
Confidence            799999999999999999995   68999999986

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.21  E-value=3.2e-06  Score=50.61  Aligned_cols=36  Identities=8%  Similarity=0.032  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++|+++||||+  +.||..+++.|++.   +.+|++.+|+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~---G~~Vi~~~r~   42 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQ---GATVIYTYQN   42 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEecCc
Confidence            678999999999  79999999999997   6889888876

>PRK09620 hypothetical protein; Provisional

Probab=98.20  E-value=4.1e-06  Score=50.40  Aligned_cols=36  Identities=17%  Similarity=0.437  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCC----------------ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGT----------------GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~----------------G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++|+||+|.                ||+|++++++|+.+   |++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~---Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISK---GAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHC---CCeEEEEeCC
Confidence            368899999886                99999999999998   6899988863

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.20  E-value=1e-05  Score=45.18  Aligned_cols=34  Identities=24%  Similarity=0.423  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+++||||++.||..++++|+++  ....|+++.|+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~   34 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARR--GARVVILTSRS   34 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeec
Confidence            57999999999999999999998  24578888887

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.20  E-value=6.5e-06  Score=49.50  Aligned_cols=37  Identities=8%  Similarity=0.012  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  +.||.++++.|++.   +.+|++.+|+.
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~---G~~v~~~~r~~   43 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNA---GAKLVFTYAGE   43 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEecCcc
Confidence            467899999997  89999999999997   67898887753

>KOG1431|consensus

Probab=98.19  E-value=8.5e-06  Score=49.75  Aligned_cols=53  Identities=21%  Similarity=0.276  Sum_probs=40.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhcC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV   66 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~   66 (67)
                      ++|+|||++|.+|+++.+.+.++..+..+.........+.......+.+|...
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESE   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhcc
Confidence            68999999999999999999998654456666666655566667777777643

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.19  E-value=7.2e-06  Score=48.51  Aligned_cols=32  Identities=16%  Similarity=0.050  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++++||||+|+||.++++.|++.   +.+|+++.+
T Consensus         3 k~ilItGas~giG~~la~~l~~~---g~~v~~~~~   34 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAAR---GWSVGINYA   34 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHC---CCEEEEEeC
Confidence            58999999999999999999997   567766554

>TIGR02415 23BDH acetoin reductases

Probab=98.19  E-value=4.3e-06  Score=49.55  Aligned_cols=34  Identities=26%  Similarity=0.293  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++||||+|+||.+++++|++.   +.+|+++.|+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~---G~~v~~~~r~~   34 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKD---GFAVAVADLNE   34 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            47999999999999999999987   67898888864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.18  E-value=5.2e-06  Score=49.85  Aligned_cols=37  Identities=8%  Similarity=-0.093  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  +.||.++++.|+++   +.+|++.+|+.
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~---G~~v~l~~r~~   46 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRAL---GAELAVTYLND   46 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCh
Confidence            578999999998  59999999999997   67898888864

>PRK05855 short chain dehydrogenase; Validated

Probab=98.18  E-value=4.5e-06  Score=54.34  Aligned_cols=38  Identities=16%  Similarity=0.164  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|.++   +++|++++|+.+
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~---G~~v~~~~r~~~  350 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFARE---GAEVVASDIDEA  350 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999999999999999999987   678999998753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.18  E-value=8e-06  Score=48.10  Aligned_cols=31  Identities=23%  Similarity=0.173  Sum_probs=26.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      ++++||||+|+||++++++|+++   +++|+++.
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~---g~~v~~~~   32 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQE---GYTVAVNY   32 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHC---CCEEEEEe
Confidence            47999999999999999999987   57777643

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.16  E-value=5.1e-06  Score=49.07  Aligned_cols=34  Identities=12%  Similarity=0.012  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++||||+|+||.+++++|+++   ++.|++..++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~---G~~vv~~~~~   35 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAER---GYAVCLNYLR   35 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHC---CCeEEEecCC
Confidence            357999999999999999999997   5677666543

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.16  E-value=4.4e-06  Score=49.98  Aligned_cols=39  Identities=18%  Similarity=0.221  Sum_probs=33.1

Q ss_pred             hccCCeEEEEcCCC-hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G-~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+| .||.++++.|+++   +.+|++.+|+..
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~---G~~V~~~~~~~~   53 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEE---GARVVISDIHER   53 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            45678999999997 6999999999987   678888887643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.15  E-value=4e-06  Score=49.07  Aligned_cols=32  Identities=28%  Similarity=0.362  Sum_probs=28.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|||++|+||++++++|+++   +++|++++|+.
T Consensus         1 vlItG~~g~iG~~la~~l~~~---G~~v~~~~r~~   32 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKE---GAKVIITYRSS   32 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            589999999999999999997   67899998865

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.14  E-value=8.3e-06  Score=49.01  Aligned_cols=33  Identities=15%  Similarity=0.120  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..++||||+|+||.++++.|++.   +.+|+++.|+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~---G~~V~~~~~~   34 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQE---GYRVVLHYHR   34 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhC---CCeEEEEcCC
Confidence            46899999999999999999997   6788887654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06720 hypothetical protein; Provisional

Probab=98.14  E-value=8.1e-06  Score=46.94  Aligned_cols=38  Identities=18%  Similarity=0.143  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++.++||||++.||..++..|.+.   +.+|++.+|+.+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~---G~~V~l~~r~~~   51 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQ---GAKVIVTDIDQE   51 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            57889999999999999999999987   678999888643

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.13  E-value=8.6e-06  Score=48.37  Aligned_cols=38  Identities=16%  Similarity=0.291  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||++.||..+++.|.+.   +.+|++++|+.+
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~---G~~V~~~~r~~~   40 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARL---GATLILCDQDQS   40 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            46789999999999999999999997   678999888654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.13  E-value=1.9e-05  Score=43.76  Aligned_cols=36  Identities=28%  Similarity=0.350  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|++|.+++++|++++  .+.|+++.|++.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g--~~~v~~~~r~~~   36 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERG--ARHLVLLSRSGP   36 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhh--CCeEEEEeCCCC
Confidence            468999999999999999999872  246788888654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08324 short chain dehydrogenase; Validated

Probab=98.13  E-value=5.3e-06  Score=56.09  Aligned_cols=38  Identities=24%  Similarity=0.285  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||.++++.|++.   +.+|++++|+..
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~---Ga~Vvl~~r~~~  457 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAE---GACVVLADLDEE  457 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHC---cCEEEEEeCCHH
Confidence            46789999999999999999999987   678999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.13  E-value=1.5e-05  Score=47.96  Aligned_cols=37  Identities=16%  Similarity=0.048  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  +.||.++++.|++.   +.+|++..|+.
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~---G~~v~~~~~~~   42 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAA---GAELGITYLPD   42 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHC---CCEEEEEecCc
Confidence            467899999986  79999999999997   67888776653

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.12  E-value=6.8e-06  Score=52.03  Aligned_cols=41  Identities=17%  Similarity=0.285  Sum_probs=33.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|++|+.++++|..+. ...+++++.|+..
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~  192 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQE  192 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHH
Confidence            3678999999999999999999998641 2358888888643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.11  E-value=5.5e-06  Score=50.26  Aligned_cols=37  Identities=8%  Similarity=0.052  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++.++||||++  .||+.+++.|++.   +.+|++.+|+.
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~---Ga~V~~~~r~~   43 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQ---GAELAFTYQGE   43 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhC---CCEEEEecCch
Confidence            5688999999997  9999999999997   68898888753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.10  E-value=6.6e-06  Score=49.06  Aligned_cols=36  Identities=19%  Similarity=0.171  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|  .||.+++++|+++   +++|++++|+
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~---G~~vi~~~r~   40 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAK---GIDIFFTYWS   40 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHc---CCcEEEEcCC
Confidence            4568899999996  6999999999997   5789999887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.10  E-value=8e-06  Score=52.51  Aligned_cols=38  Identities=18%  Similarity=0.135  Sum_probs=32.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||..+++.|.++   +.+|++++++.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~---Ga~vi~~~~~~  244 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARD---GAHVVCLDVPA  244 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            356789999999999999999999987   67899988753

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.08  E-value=2.1e-05  Score=45.34  Aligned_cols=33  Identities=24%  Similarity=0.448  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|.||.+++++|.++    .+|++++|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~----~~vi~~~r~~   33 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR----HEVITAGRSS   33 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc----CcEEEEecCC
Confidence            47999999999999999999875    5788888865

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.08  E-value=1.6e-05  Score=43.31  Aligned_cols=35  Identities=23%  Similarity=0.590  Sum_probs=28.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|.|.||+|++|+.+++.|.+. |....+.+++++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~h-p~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEH-PDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHT-STEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcC-CCccEEEeeeecc
Confidence            5899999999999999999995 5655566666665

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06484 short chain dehydrogenase; Validated

Probab=98.08  E-value=9.2e-06  Score=52.86  Aligned_cols=38  Identities=21%  Similarity=0.329  Sum_probs=33.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...+++++||||+|.||.++++.|+++   +++|++++|+.
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~---G~~V~~~~r~~  303 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAA---GDRLLIIDRDA  303 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            346789999999999999999999997   67999999864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.07  E-value=1.3e-05  Score=47.13  Aligned_cols=35  Identities=31%  Similarity=0.620  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+++||||+|+||++++++|+++.. ...|....|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~-~~~v~~~~~~   35 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYP-DATVHATYRH   35 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCC-CCEEEEEccC
Confidence            5799999999999999999999732 2356555554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.07  E-value=1.1e-05  Score=49.86  Aligned_cols=36  Identities=17%  Similarity=0.207  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      +++++||||++.||.++++.|+++   + ++|++++|+..
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~---G~~~V~l~~r~~~   39 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAAT---GEWHVIMACRDFL   39 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHc---CCCEEEEEeCCHH
Confidence            568999999999999999999997   6 78999888643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.06  E-value=1.2e-05  Score=47.35  Aligned_cols=32  Identities=22%  Similarity=0.315  Sum_probs=28.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++||||+|+||.++++.|+++   +.+|++++|..
T Consensus         1 vlItGas~giG~~~a~~l~~~---G~~v~~~~~~~   32 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAAD---GFEICVHYHSG   32 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            589999999999999999987   67888887753

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.05  E-value=8.2e-06  Score=49.11  Aligned_cols=36  Identities=11%  Similarity=0.014  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||  ++.||+++++.|+++   +.+|++..|.
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~---G~~v~~~~~~   41 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQ---GAELAFTYVV   41 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCc
Confidence            57889999997  679999999999997   6788887664

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.04  E-value=1.2e-05  Score=46.71  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+||+|. +++.|.++   +++|++++|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~---G~~V~v~~R~~   33 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEK---GFHVSVIARRE   33 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHC---cCEEEEEECCH
Confidence            57999999998876 99999997   68999988864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.04  E-value=1.2e-05  Score=48.72  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||++  .||+++++.|+++   +++|++.+|+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~---G~~vil~~r~   41 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQN   41 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHC---CCEEEEEecc
Confidence            5688999999985  8999999999997   6788888775

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.04  E-value=1.3e-05  Score=49.58  Aligned_cols=47  Identities=21%  Similarity=0.244  Sum_probs=36.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      |+|||||++|.+|..|++.|. .   ..+|+.++|..-+....+.+..++.
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~---~~~v~a~~~~~~Ditd~~~v~~~i~   47 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-G---EFEVIATDRAELDITDPDAVLEVIR   47 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-C---CceEEeccCccccccChHHHHHHHH
Confidence            459999999999999999987 2   3689999998766665555555544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.04  E-value=1e-05  Score=49.25  Aligned_cols=37  Identities=5%  Similarity=0.024  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||+  +.||+.+++.|++.   +.+|++.+|+.
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~---G~~Vil~~r~~   41 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQ---GAELAFTYLNE   41 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEecCH
Confidence            467899999997  79999999999997   67898888863

>PRK06484 short chain dehydrogenase; Validated

Probab=98.03  E-value=1e-05  Score=52.67  Aligned_cols=38  Identities=21%  Similarity=0.363  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++||||++.||.++++.|.++   +++|++++|+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~---G~~V~~~~r~~~   40 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARA---GDQVVVADRNVE   40 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            35789999999999999999999997   689999988644

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.02  E-value=1.8e-05  Score=47.50  Aligned_cols=37  Identities=14%  Similarity=0.064  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||  ++.||.++++.|+++   +.+|++.+|+.
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~---G~~v~l~~r~~   43 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQ---GAEVVLTGFGR   43 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHC---CCEEEEecCcc
Confidence            56789999999  899999999999997   67899888753

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.02  E-value=1.1e-05  Score=48.57  Aligned_cols=36  Identities=8%  Similarity=0.093  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++++.++||||++  .||.++++.|.++   +.+|++.+|+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~---G~~v~~~~r~   43 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKH---GAELWFTYQS   43 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHc---CCEEEEEeCc
Confidence            5678999999997  8999999999987   6788887775

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.01  E-value=1.1e-05  Score=48.95  Aligned_cols=38  Identities=5%  Similarity=-0.044  Sum_probs=32.3

Q ss_pred             hhccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++++||||+  +.||.++++.|+++   +.+|++..|+
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~---G~~V~l~~r~   45 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAA---GAELAFTYQG   45 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCc
Confidence            34678899999997  89999999999997   6788887765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=97.98  E-value=2.2e-05  Score=46.48  Aligned_cols=38  Identities=21%  Similarity=0.312  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||++.||..+++.|.++   +..|+++.+...
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~---G~~v~~~~~~~~   40 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALARE---GARVVVAARRSE   40 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCeEEEEcCCCc
Confidence            46789999999999999999999976   678887777654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.96  E-value=2.1e-05  Score=47.11  Aligned_cols=35  Identities=17%  Similarity=0.245  Sum_probs=29.9

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||+|  .||.+++++|++.   +.+|++..|
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~---G~~vi~~~~   40 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEA---GADIFFTYW   40 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHC---CCeEEEEec
Confidence            6789999999995  8999999999997   578877654

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.94  E-value=1.4e-05  Score=46.78  Aligned_cols=31  Identities=26%  Similarity=0.354  Sum_probs=28.0

Q ss_pred             EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         17 LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        17 litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +||||+|++|++++++|+++   +.+|++++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~---G~~v~~~~r~~   31 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAE---GARVTIASRSR   31 (230)
T ss_pred             CeecCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            59999999999999999997   67899999874

>PRK05599 hypothetical protein; Provisional

Probab=97.91  E-value=3.3e-05  Score=46.11  Aligned_cols=34  Identities=21%  Similarity=0.227  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||++.||..++++|. +   +.+|++++|+.+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~---g~~Vil~~r~~~   34 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-H---GEDVVLAARRPE   34 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-C---CCEEEEEeCCHH
Confidence            579999999999999999987 4   478999888654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.91  E-value=3.6e-05  Score=44.75  Aligned_cols=38  Identities=26%  Similarity=0.339  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+||+|.+|+.+++.|.+.   +++|++++|+..
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~---g~~V~l~~R~~~   63 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLARE---GARVVLVGRDLE   63 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            46789999999999999999999886   578999988743

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.90  E-value=2.8e-05  Score=46.86  Aligned_cols=36  Identities=14%  Similarity=0.061  Sum_probs=30.5

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||  ++.||.++++.|++.   +++|++.+|.
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~---G~~v~~~~~~   41 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKRE---GAELAFTYVG   41 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHC---CCeEEEEccc
Confidence            56789999996  679999999999997   6788887654

>KOG1201|consensus

Probab=97.89  E-value=7.9e-05  Score=46.51  Aligned_cols=39  Identities=18%  Similarity=0.280  Sum_probs=33.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++.++||||.+.+|+.++.+++++   +..+.+.|.+..
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~r---g~~~vl~Din~~   73 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKR---GAKLVLWDINKQ   73 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHh---CCeEEEEecccc
Confidence            366889999999999999999999998   567888887655

>KOG0725|consensus

Probab=97.88  E-value=3.1e-05  Score=47.55  Aligned_cols=39  Identities=26%  Similarity=0.272  Sum_probs=35.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|.++||||+..||++++..|.+.   +.+|++.+|+.+
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~---Ga~v~i~~r~~~   43 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKA---GAKVVITGRSEE   43 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            477899999999999999999999998   789999999765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=97.85  E-value=0.00012  Score=42.22  Aligned_cols=45  Identities=22%  Similarity=0.338  Sum_probs=33.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC-CCCChHHHHHH
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKN   61 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~-~~~~~~~~~~~   61 (67)
                      +++||||.|.+|..++++|..+.  ..+|+++.|+. ........+..
T Consensus         2 tylitGG~gglg~~la~~La~~~--~~~~il~~r~~~~~~~~~~~i~~   47 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERG--ARRLILLGRSGAPSAEAEAAIRE   47 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcC--CCEEEEeccCCCccHHHHHHHHH
Confidence            68999999999999999999983  45899999983 33333333333

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4169|consensus

Probab=97.81  E-value=2.8e-05  Score=47.26  Aligned_cols=51  Identities=18%  Similarity=0.244  Sum_probs=38.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      +++|++++||+.|.||..+.++|+..   +..+.+++-+.++.+...+++++..
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~k---gik~~~i~~~~En~~a~akL~ai~p   53 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEK---GIKVLVIDDSEENPEAIAKLQAINP   53 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHc---CchheeehhhhhCHHHHHHHhccCC
Confidence            57999999999999999999999998   4566666655555555555555543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=97.81  E-value=3.9e-05  Score=45.88  Aligned_cols=37  Identities=19%  Similarity=0.348  Sum_probs=29.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~~~   51 (67)
                      .++||||++.||.+++++|.+.. ..+.+|++++|+..
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~   39 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDE   39 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHH
Confidence            58999999999999999998721 02578999988743

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1208|consensus

Probab=97.79  E-value=6.8e-05  Score=47.07  Aligned_cols=38  Identities=21%  Similarity=0.195  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|||||..||.+.++.|..+   +.+|+...|+..
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~---Ga~Vv~~~R~~~   70 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALR---GAHVVLACRNEE   70 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhC---CCEEEEEeCCHH
Confidence            45689999999999999999999998   689999999863

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.79  E-value=6e-05  Score=45.34  Aligned_cols=38  Identities=26%  Similarity=0.400  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+-+||||||+..||..+++.|++.   +.+|++..|+..
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~el---gN~VIi~gR~e~   40 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLEL---GNTVIICGRNEE   40 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHh---CCEEEEecCcHH
Confidence            45679999999999999999999998   689999888743

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.78  E-value=8e-05  Score=46.39  Aligned_cols=36  Identities=14%  Similarity=0.054  Sum_probs=31.3

Q ss_pred             hccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++|+++||||  +..||.++++.|.+.   |.+|++ .|.
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~---Ga~Vv~-~~~   43 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAA---GAEILV-GTW   43 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHC---CCEEEE-EeC
Confidence            378999999999  799999999999997   678877 553

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.74  E-value=6.9e-05  Score=48.38  Aligned_cols=38  Identities=21%  Similarity=0.257  Sum_probs=33.6

Q ss_pred             hccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||                +|.+|.++++.|..+   |.+|++++++.
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~---Ga~V~~v~~~~  238 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR---GADVTLVSGPV  238 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC---CCEEEEeCCCc
Confidence            367899999999                999999999999998   78999988753

>PRK06940 short chain dehydrogenase; Provisional

Probab=97.72  E-value=8.9e-05  Score=44.99  Aligned_cols=34  Identities=12%  Similarity=0.255  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|||| |+||+++++.|. .   +++|++++|+..
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~---G~~Vv~~~r~~~   35 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-A---GKKVLLADYNEE   35 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-C---CCEEEEEeCCHH
Confidence            357899998 699999999985 4   579999998643

>KOG1014|consensus

Probab=97.62  E-value=0.00013  Score=45.78  Aligned_cols=36  Identities=22%  Similarity=0.263  Sum_probs=32.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +-.+|||||..||+..+++|.++   |.+|++++|.++.
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkr---G~nvvLIsRt~~K   85 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKR---GFNVVLISRTQEK   85 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHc---CCEEEEEeCCHHH
Confidence            66899999999999999999998   7899999998763

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.62  E-value=0.00018  Score=45.27  Aligned_cols=38  Identities=16%  Similarity=0.151  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCC----CcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~----~~~~v~~~~r~~~   51 (67)
                      .+|+||||+|++|++++..|+...-    .+.+|+++++++.
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~   44 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA   44 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence            4799999999999999999988521    1248999998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.59  E-value=0.00017  Score=43.36  Aligned_cols=27  Identities=19%  Similarity=0.399  Sum_probs=24.1

Q ss_pred             cCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         20 GGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        20 Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++||+|.+++++|+++   |++|++++|+
T Consensus        23 ~SSG~iG~aLA~~L~~~---G~~V~li~r~   49 (229)
T PRK06732         23 HSTGQLGKIIAETFLAA---GHEVTLVTTK   49 (229)
T ss_pred             ccchHHHHHHHHHHHhC---CCEEEEEECc
Confidence            67899999999999997   6899999875

>KOG4039|consensus

Probab=97.59  E-value=0.00016  Score=42.89  Aligned_cols=39  Identities=23%  Similarity=0.465  Sum_probs=34.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|..+|.||||..|+-++++++++ +...+|+++.|++
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~   54 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRE   54 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEecc
Confidence            56789999999999999999999997 5668999999974

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.58  E-value=0.0003  Score=44.33  Aligned_cols=37  Identities=16%  Similarity=0.319  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|.||+|++|+.+++.|.++.-...++..+.+..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            5899999999999999999988521123667776653

>KOG1203|consensus

Probab=97.57  E-value=0.00011  Score=47.66  Aligned_cols=38  Identities=29%  Similarity=0.491  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+...|+|.||+|.+|+.+++.|+++   +..|.++.|+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkr---gf~vra~VRd~~  114 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKR---GFSVRALVRDEQ  114 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHC---CCeeeeeccChh
Confidence            45568999999999999999999998   689999999865

>KOG0747|consensus

Probab=97.55  E-value=0.00011  Score=45.91  Aligned_cols=35  Identities=31%  Similarity=0.727  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      -++++||||+||||++.+..+...+|+. +++.++.
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~-~~v~idk   40 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDY-KFVNLDK   40 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCC-cEEEEee
Confidence            3789999999999999999999987764 5555554

>PRK05086 malate dehydrogenase; Provisional

Probab=97.50  E-value=0.00038  Score=43.59  Aligned_cols=38  Identities=18%  Similarity=0.180  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|+||+|.+|++++..+....+.++.++++++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            58999999999999999988663334578888888643

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.47  E-value=0.0003  Score=41.76  Aligned_cols=35  Identities=40%  Similarity=0.386  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+||+|.+|+.+...|.+.   +++|++.+|+++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~---G~~V~v~~r~~~   35 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKA---GNKIIIGSRDLE   35 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhC---CCEEEEEEcCHH
Confidence            47999999999999999999987   589998888754

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.46  E-value=0.0003  Score=44.22  Aligned_cols=36  Identities=28%  Similarity=0.226  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+.||||=||.-|++|.+.|++.   |+.|+.+.|+.+
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLek---GY~VhGi~Rrss   37 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEK---GYEVHGIKRRSS   37 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhc---CcEEEEEeeccc
Confidence            478999999999999999999998   789999998744

>PLN00015 protochlorophyllide reductase

Probab=97.44  E-value=0.00021  Score=44.03  Aligned_cols=31  Identities=19%  Similarity=0.234  Sum_probs=27.5

Q ss_pred             EEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCC
Q psy17490         17 LVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDK   50 (67)
Q Consensus        17 litGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~   50 (67)
                      +||||++.||.+++++|+++   + ++|++.+|+.
T Consensus         1 lITGas~GIG~aia~~l~~~---G~~~V~~~~r~~   32 (308)
T PLN00015          1 IITGASSGLGLATAKALAET---GKWHVVMACRDF   32 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHC---CCCEEEEEeCCH
Confidence            59999999999999999997   6 7898888864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.42  E-value=0.00035  Score=42.81  Aligned_cols=34  Identities=21%  Similarity=0.241  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|+||||. |+.+++.|.+.   +++|++..+...
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~---g~~v~~s~~t~~   34 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQ---GIEILVTVTTSE   34 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhC---CCeEEEEEccCC
Confidence            57999999999 99999999987   688888888654

This enzyme was found to be a monomer by gel filtration.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.40  E-value=0.00083  Score=37.61  Aligned_cols=37  Identities=16%  Similarity=0.206  Sum_probs=32.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|++|.+|++++..|... +-+.+++++++++.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~   37 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINED   37 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcc
Confidence            57999999999999999999987 44578999999854

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.38  E-value=0.00043  Score=44.53  Aligned_cols=37  Identities=27%  Similarity=0.427  Sum_probs=30.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..++|.|.||||++|..+++.|.++ | ..+|..+.+..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~h-P-~~el~~l~s~~   73 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANH-P-DFEITVMTADR   73 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhC-C-CCeEEEEEChh
Confidence            3468999999999999999999887 3 35888877653

>KOG1611|consensus

Probab=97.37  E-value=0.00049  Score=41.87  Aligned_cols=38  Identities=26%  Similarity=0.421  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++||||+..||--++++|++. ++...++...|+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e   40 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPE   40 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChH
Confidence            356999999999999999999986 33334444445454

>KOG1207|consensus

Probab=97.35  E-value=0.00036  Score=41.35  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=36.2

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++.++.+++||+.-.||+.++..|.+.   +.+|+++.|.+.
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~a---GA~ViAvaR~~a   42 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKA---GAQVIAVARNEA   42 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhc---CCEEEEEecCHH
Confidence            34567899999999999999999999998   789999999865

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.31  E-value=0.0013  Score=36.40  Aligned_cols=39  Identities=21%  Similarity=0.239  Sum_probs=32.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++|.|+ |..|+.++..|...  +..+|+++.|+..
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~--g~~~i~i~nRt~~   47 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAAL--GAKEITIVNRTPE   47 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHT--TSSEEEEEESSHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHc--CCCEEEEEECCHH
Confidence            467899999997 77899999999997  3457999999743

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.28  E-value=0.00075  Score=41.97  Aligned_cols=35  Identities=11%  Similarity=0.004  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++|+++||||.  ..||+++++.|.++   |.+|++.++
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~---Ga~Vvv~~~   42 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEA---GATILVGTW   42 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHC---CCEEEEEec
Confidence            578999999995  89999999999998   688888654

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.28  E-value=0.0011  Score=41.10  Aligned_cols=37  Identities=14%  Similarity=0.054  Sum_probs=30.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|| |.+|++++..|...+  ..+|++++|+.
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G--~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDG--AKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCc
Confidence            45789999999 799999999998872  34699999975

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.27  E-value=0.001  Score=42.16  Aligned_cols=35  Identities=26%  Similarity=0.378  Sum_probs=25.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++|.|+||||++|..+++.|.++.-...++..+..
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s   39 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS   39 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence            58999999999999999999964211235545543

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.22  E-value=0.001  Score=42.18  Aligned_cols=34  Identities=18%  Similarity=0.297  Sum_probs=27.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|+|+||+|++|+.+++.|.+. |. .++..+.++
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~-p~-~el~~~~~s   37 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANH-PW-FEVTALAAS   37 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEcC
Confidence            58999999999999999999875 33 377776444

>KOG1372|consensus

Probab=97.21  E-value=0.0011  Score=41.31  Aligned_cols=49  Identities=22%  Similarity=0.251  Sum_probs=40.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhcC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV   66 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~   66 (67)
                      +..||||-+|-=|+++++.|+..   +++|+.+.|+.+. -...+++.+..+|
T Consensus        29 kvALITGItGQDGSYLaEfLL~K---gYeVHGiiRRsSs-FNT~RIeHlY~nP   77 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSK---GYEVHGIIRRSSS-FNTARIEHLYSNP   77 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhC---CceeeEEEeeccc-cchhhhhhhhcCc
Confidence            47899999999999999999997   7899999987652 2346777777665

>KOG2865|consensus

Probab=97.19  E-value=0.00079  Score=42.56  Aligned_cols=37  Identities=27%  Similarity=0.432  Sum_probs=30.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+-.+-|.|||||+|++++++|.+.   +.+|++--|..+
T Consensus        60 sGiVaTVFGAtGFlGryvvnklak~---GSQviiPyR~d~   96 (391)
T KOG2865|consen   60 SGIVATVFGATGFLGRYVVNKLAKM---GSQVIIPYRGDE   96 (391)
T ss_pred             cceEEEEecccccccHHHHHHHhhc---CCeEEEeccCCc
Confidence            3445778899999999999999997   688888777543

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.10  E-value=0.002  Score=40.77  Aligned_cols=33  Identities=24%  Similarity=0.447  Sum_probs=26.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++|+|.||+|++|+.+++.|.+. |. .++..+.+
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~-p~-~elv~v~~   35 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNH-PE-VEIVAVTS   35 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEEC
Confidence            58999999999999999999876 33 46655554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.05  E-value=0.0011  Score=42.91  Aligned_cols=35  Identities=37%  Similarity=0.520  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|.|+ |+||+.++..|.++. + .+|++.+|+.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~-d-~~V~iAdRs~~   36 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNG-D-GEVTIADRSKE   36 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCC-C-ceEEEEeCCHH
Confidence            57999998 999999999999973 2 79999999854

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.03  E-value=0.0023  Score=40.01  Aligned_cols=36  Identities=19%  Similarity=0.250  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|+|++|++|..++..++..+ ...+|+++++.+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g-~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKED-VVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEECcc
Confidence            579999999999999999999872 224799999854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.03  E-value=0.0021  Score=40.62  Aligned_cols=39  Identities=18%  Similarity=0.192  Sum_probs=31.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+.++|.|+|++|.||+.+...|... ....++.++|+.
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~-~~~~elvL~Di~   43 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQN-PHVSELSLYDIV   43 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcC-CCCCEEEEEecC
Confidence            355679999999999999999988854 234689999984

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.01  E-value=0.0025  Score=40.41  Aligned_cols=33  Identities=24%  Similarity=0.498  Sum_probs=25.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEE-EEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIY-IMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~-~~~r   48 (67)
                      ++|.|.||||++|..+++.|.+. |. .++. ++++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~h-P~-~el~~l~~s   34 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNH-PE-VEITYLVSS   34 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CC-ceEEEEecc
Confidence            47999999999999999999876 44 4666 4343

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.99  E-value=0.003  Score=40.15  Aligned_cols=37  Identities=30%  Similarity=0.600  Sum_probs=28.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhh-CCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~-~~~~~~v~~~~r~   49 (67)
                      +..+|.|.||||++|..+++.|.++ .|. .++..+...
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~-~~l~~laS~   40 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPV-GELYALASE   40 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCc-eEEEEEEcc
Confidence            4568999999999999999998884 233 466655543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.94  E-value=0.002  Score=42.09  Aligned_cols=35  Identities=31%  Similarity=0.338  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+||+|.+|..++..|.+.   ++.|++.+|++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~---G~~V~v~~r~~~   35 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEK---GFEVIVTGRDPK   35 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHC---CCEEEEEECChH
Confidence            47999999999999999999887   578999998754

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.92  E-value=0.003  Score=38.81  Aligned_cols=38  Identities=26%  Similarity=0.332  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|...+  ..+|++++|+..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~~  158 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTVE  158 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence            45788999987 999999999999872  368999999754

>PLN00106 malate dehydrogenase

Probab=96.91  E-value=0.004  Score=39.38  Aligned_cols=37  Identities=16%  Similarity=0.176  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+|.|+|++|.||+.+...|..+ +-..++.+++..+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~-~~~~el~L~Di~~   54 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMN-PLVSELHLYDIAN   54 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCCCEEEEEecCC
Confidence            358999999999999999998865 2346899999866

>KOG1200|consensus

Probab=96.89  E-value=0.004  Score=37.55  Aligned_cols=41  Identities=17%  Similarity=0.163  Sum_probs=35.0

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+..+..+||||+..||+++++.|.+.   +.+|.+.+++..
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~---Garv~v~dl~~~   49 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKK---GARVAVADLDSA   49 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhc---CcEEEEeecchh
Confidence            44566788999999999999999999997   789999888654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.88  E-value=0.0028  Score=41.00  Aligned_cols=37  Identities=19%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||                +|.+|..+++.+..+   |.+|+++.++.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~---Ga~V~~~~g~~  235 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR---GADVTLITGPV  235 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence            67899999998                468999999999998   78998887653

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.85  E-value=0.0033  Score=39.85  Aligned_cols=35  Identities=20%  Similarity=0.381  Sum_probs=24.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +|+|.||+|++|..+++.|.++.-...++..+.+.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~   35 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASD   35 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEecc
Confidence            47899999999999999988741112344444454

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.84  E-value=0.004  Score=36.74  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=31.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++|+|. |-+|+++++.|.+.   +++|++.++++
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~---G~~Vvv~D~~~   61 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEE---GAKLIVADINE   61 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            367899999988 68999999999987   68999887764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.83  E-value=0.006  Score=38.85  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=25.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .++|.|.||+|++|..+++.|.++.-...++..+.
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~la   41 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLA   41 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEE
Confidence            46899999999999999999887421123454444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.80  E-value=0.0045  Score=35.78  Aligned_cols=37  Identities=19%  Similarity=0.315  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+.+++|.-+++.|.+.   +.+|+++.|..
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~---g~~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNR---NATVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhC---CCEEEEEECCc
Confidence            67899999999888999999999987   45788888864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.79  E-value=0.0034  Score=48.33  Aligned_cols=37  Identities=22%  Similarity=0.150  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++++++||||++.||..++++|.++.  +.+|++++|+
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~--ga~viL~gRs 2031 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQC--QAHFILAGRS 2031 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhc--CCEEEEEeCC
Confidence            357899999999999999999999872  4689999997

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06849 hypothetical protein; Provisional

Probab=96.77  E-value=0.0046  Score=39.42  Aligned_cols=37  Identities=14%  Similarity=0.055  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.|+|||||+...+|-.+++.|.+.   |++|++++..+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~---G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNA---GHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            4689999999999999999999997   789999887653

>KOG1478|consensus

Probab=96.77  E-value=0.0069  Score=37.86  Aligned_cols=24  Identities=25%  Similarity=0.322  Sum_probs=22.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSF   37 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~   37 (67)
                      |.++|||++..+|-.++..|++..
T Consensus         4 KvalITGanSglGl~i~~RLl~~~   27 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAED   27 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhcc
Confidence            579999999999999999999974

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.76  E-value=0.0037  Score=40.39  Aligned_cols=36  Identities=17%  Similarity=0.193  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|+.+ +|..+++.|++.   ++.|++.++..
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~---G~~V~~~d~~~   38 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKL---GAKVILTDEKE   38 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHC---CCEEEEEeCCc
Confidence            4678999999888 999999999998   78999998864

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.74  E-value=0.0035  Score=40.12  Aligned_cols=35  Identities=26%  Similarity=0.414  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|.|.||.|.+|..++..|.+.   ++.|++.+|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~---G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLS---GYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHC---CCeEEEeCCCc
Confidence            368999999999999999999997   68899999864

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.73  E-value=0.0046  Score=39.11  Aligned_cols=31  Identities=23%  Similarity=0.391  Sum_probs=24.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   46 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~   46 (67)
                      ++|.|+|++|++|+++++.|.++ +. .+|..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~-~~-~~l~~v   31 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKH-PY-FELAKV   31 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-CC-ceEEEE
Confidence            37999999999999999988775 33 356555

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.72  E-value=0.007  Score=33.11  Aligned_cols=36  Identities=22%  Similarity=0.429  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|.|.|++|-.|+.+++.+.+. ++..-+-+++|++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence            47999999999999999999995 3333455566665

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.68  E-value=0.0059  Score=36.11  Aligned_cols=35  Identities=17%  Similarity=0.309  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|| |-+|...++.|++.   +.+|+++++.
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~---ga~V~VIs~~   42 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKY---GAHIVVISPE   42 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEcCC
Confidence            67899999988 88999999999997   5789888754

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.65  E-value=0.0063  Score=33.78  Aligned_cols=38  Identities=18%  Similarity=0.221  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++|+|+ |.+|..+++.|.+..  ++.|++.+|++.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~~   54 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTLE   54 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCHH
Confidence            45789999987 999999999998862  368999888754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.58  E-value=0.0051  Score=38.21  Aligned_cols=34  Identities=18%  Similarity=0.341  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+| .|++|..++..|+..   +++|++.+|++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~---G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARA---GHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHC---CCeeEEEeCCHH
Confidence            4789998 999999999999997   689999999754

>cd00704 MDH Malate dehydrogenase

Probab=96.55  E-value=0.0098  Score=37.55  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=28.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~   50 (67)
                      +|.|+||+|.+|+.++..|...+ -..     +++++++++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~-~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGE-LFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCC-ccCCCCceEEEEEecCC
Confidence            68999999999999999888752 112     589999876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.52  E-value=0.015  Score=37.90  Aligned_cols=34  Identities=12%  Similarity=0.107  Sum_probs=28.1

Q ss_pred             cCCeEEEEcCCChHHHH--HHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~--l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+|++||||+++.+|.+  +++.| ..   +..++++++.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~---GA~Vi~v~~~   75 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GA---GADTLGVFFE   75 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-Hc---CCeEEEEecC
Confidence            45899999999999999  78888 65   6777777753

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.49  E-value=0.01  Score=36.00  Aligned_cols=40  Identities=20%  Similarity=0.272  Sum_probs=32.6

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +..+++++|+|.|+ |.+|+.+++.|...+  ..+++++|.+.
T Consensus        27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~   66 (245)
T PRK05690         27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDT   66 (245)
T ss_pred             HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCE
Confidence            34567789999988 889999999999973  56899888753

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.48  E-value=0.0079  Score=35.43  Aligned_cols=39  Identities=21%  Similarity=0.409  Sum_probs=32.3

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++.+|+|.|..| +|.++++.|...  +..+++++|.+
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~--GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLA--GIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHc--CCCEEEEEECC
Confidence            4456778999998887 999999999997  35789998875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.46  E-value=0.0096  Score=38.45  Aligned_cols=37  Identities=16%  Similarity=0.131  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+.| +|...++.|++.   +..|++.++...
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~---G~~V~~~d~~~~   39 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKL---GANVTVNDGKPF   39 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHC---CCEEEEEcCCCc
Confidence            4678999999988 999999998887   689999887643

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.46  E-value=0.0043  Score=36.00  Aligned_cols=33  Identities=21%  Similarity=0.318  Sum_probs=27.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|.|.|+ |.+|+.++..++..   +++|+++++++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARA---GYEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHT---TSEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhC---CCcEEEEECChH
Confidence            4788887 99999999999997   789999999765

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.45  E-value=0.011  Score=37.30  Aligned_cols=35  Identities=20%  Similarity=0.177  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|+|++|.+|+.++..|..+ +-..++.+++.+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~-~~~~elvLiDi~   35 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLN-PLVSELALYDIV   35 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-CCCcEEEEEecC
Confidence            47999999999999999988775 233588888876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.44  E-value=0.0064  Score=39.19  Aligned_cols=34  Identities=21%  Similarity=0.390  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++|.|+ |.+|+++++.|.++   ++.|+++++++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~---g~~v~vid~~~~   34 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGE---NNDVTVIDTDEE   34 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCcEEEEECCHH
Confidence            57899987 99999999999887   578999988654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.44  E-value=0.0077  Score=38.32  Aligned_cols=34  Identities=26%  Similarity=0.365  Sum_probs=25.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+ |++|+.+++.|.+.. ...+|++.+|+..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~-~~~~v~va~r~~~   34 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRG-PFEEVTVADRNPE   34 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTT-CE-EEEEEESSHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCC-CCCcEEEEECCHH
Confidence            789999 999999999999973 2228999999754

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.42  E-value=0.02  Score=36.23  Aligned_cols=36  Identities=19%  Similarity=0.268  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~   50 (67)
                      .+|.|+|++|.+|+.++..|+... -..     +++++|..+
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGE-LFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCC-cccCCCccEEEEEecCC
Confidence            479999999999999999988762 234     799999865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.41  E-value=0.0087  Score=40.03  Aligned_cols=36  Identities=22%  Similarity=0.154  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|+ |.+|+.++..|.+.   +.+|++++|+.
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~---G~~V~i~nR~~  412 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEK---GARVVIANRTY  412 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            45789999999 79999999999997   45899888863

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.39  E-value=0.0093  Score=37.65  Aligned_cols=38  Identities=18%  Similarity=0.279  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~~   51 (67)
                      .++|.|+|++|.+|..++..|+... -..     ++.++|..+.
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~-~~~~~~~~el~L~Di~~~   44 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGE-MFGPDQPVILQLLELPQA   44 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcc-ccCCCCceEEEEEecCCc
Confidence            3589999999999999999988752 224     7899998543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.011  Score=36.75  Aligned_cols=36  Identities=19%  Similarity=0.279  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|++|.+|+.++..|+..   +..|++..|.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~---gatVtv~~~~  192 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNA---NATVTICHSR  192 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhC---CCEEEEEeCC
Confidence            67899999999999999999999887   4588887773

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.33  E-value=0.013  Score=37.28  Aligned_cols=40  Identities=28%  Similarity=0.498  Sum_probs=32.5

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.++.++|+|.|+ |.+|++++..|...+  ..+|+++|.+.
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~   58 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDY   58 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCc
Confidence            34567788999977 889999999999973  45899999863

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.33  E-value=0.011  Score=31.31  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=29.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|+ |-+|.+=++.|++.   +.+|++++..
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~---gA~v~vis~~   39 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEA---GAKVTVISPE   39 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCC---TBEEEEEESS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEECCc
Confidence            56889999988 88999999999997   5799998876

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.30  E-value=0.014  Score=35.74  Aligned_cols=36  Identities=19%  Similarity=0.278  Sum_probs=30.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++|+|+ |.+|+.++..|.+.   +.+|++.+|+..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~---g~~v~v~~R~~~  151 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKA---DCNVIIANRTVS  151 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            4678999998 79999999999986   468999888753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.30  E-value=0.0095  Score=35.30  Aligned_cols=28  Identities=21%  Similarity=0.309  Sum_probs=24.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIY   44 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~   44 (67)
                      +++.|.||+|-+|++++..|.+.   ++.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~---g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDN---GLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhC---CCEEE
Confidence            47999999999999999999886   56665

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.27  E-value=0.013  Score=36.34  Aligned_cols=36  Identities=11%  Similarity=0.101  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~---G~~Vi~~~~~~  186 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLK---GCYVVGSAGSD  186 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999999877766   56788777653

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.25  E-value=0.014  Score=35.57  Aligned_cols=36  Identities=22%  Similarity=0.245  Sum_probs=30.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|..+++.+...   +..|+++++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~---g~~v~~~~~~~  197 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKAL---GARVIAVTRSP  197 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEeCCH
Confidence            4678999999999999999998886   56888887754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.24  E-value=0.013  Score=34.56  Aligned_cols=39  Identities=28%  Similarity=0.424  Sum_probs=31.9

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++.+++++|+|.|+.| +|.++++.|...+  ..+++++|.+
T Consensus        16 Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d   54 (197)
T cd01492          16 QKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDR   54 (197)
T ss_pred             HHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECC
Confidence            4457788999998666 9999999999973  5789998875

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.22  E-value=0.014  Score=36.26  Aligned_cols=37  Identities=14%  Similarity=0.222  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|+|. |.+|+.+++.|...   +.+|++.+|++.
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~---G~~V~v~~R~~~  185 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSAL---GARVFVGARSSA  185 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56789999988 77999999999987   568999998754

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.22  E-value=0.022  Score=34.21  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+..++|+|-+|+.+...|...   +++|++-+|+.+
T Consensus         2 ~~~~i~GtGniG~alA~~~a~a---g~eV~igs~r~~   35 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKA---GHEVIIGSSRGP   35 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhC---CCeEEEecCCCh
Confidence            4567789999999999999998   689988876654

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.21  E-value=0.015  Score=36.69  Aligned_cols=34  Identities=18%  Similarity=0.388  Sum_probs=26.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+|.|.||+|++|..+++.|.++ |.. ++..+..+
T Consensus         3 ~~VaIvGAtGy~G~eLlrlL~~h-p~~-~l~~~~s~   36 (313)
T PRK11863          3 PKVFIDGEAGTTGLQIRERLAGR-SDI-ELLSIPEA   36 (313)
T ss_pred             cEEEEECCCCHHHHHHHHHHhcC-CCe-EEEEEecC
Confidence            47999999999999999998887 433 55555443

>PRK05442 malate dehydrogenase; Provisional

Probab=96.19  E-value=0.017  Score=36.57  Aligned_cols=37  Identities=19%  Similarity=0.280  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-----eEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-----AIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-----~v~~~~r~~   50 (67)
                      .++|.|+|++|.+|+.++..|.... -..     ++.++|..+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~~~~~~el~LiDi~~   45 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGD-MLGKDQPVILQLLEIPP   45 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhh-hcCCCCccEEEEEecCC
Confidence            4689999999999999999887742 123     789998854

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.17  E-value=0.019  Score=36.79  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=25.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc--ceEEEEEe
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI--GAIYIMVR   48 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~--~~v~~~~r   48 (67)
                      ..+|.|.||||++|+.+++.|.+. +..  .++..+..
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h-~~f~v~~l~~~aS   41 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKE-TKFNIAEVTLLSS   41 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHC-CCCCcccEEEEEC
Confidence            468999999999999999998854 222  23555544

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.17  E-value=0.023  Score=34.67  Aligned_cols=36  Identities=25%  Similarity=0.392  Sum_probs=26.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|.|+|++|.+|+.+++.+.+. ++..-+.++++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~   37 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPG   37 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence            57999999999999999888764 3333344455554

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.15  E-value=0.013  Score=37.09  Aligned_cols=31  Identities=19%  Similarity=0.441  Sum_probs=25.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      +|.|.||+||.|..+++.|... |.. ++..+.
T Consensus         3 ~v~IvGasGy~G~el~rlL~~H-P~~-el~~l~   33 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGR-DDI-ELLSIA   33 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCC-CCe-EEEEEe
Confidence            6899999999999999999997 554 444443

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.15  E-value=0.043  Score=34.52  Aligned_cols=38  Identities=16%  Similarity=0.295  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|.|+|+ |.+|..++..|+.. +-..++.+++++.+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~-~~~~el~L~D~~~~   42 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQ-GIADELVIIDINKE   42 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCCc
Confidence            3568999998 99999999998876 23358999998655

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.13  E-value=0.019  Score=36.67  Aligned_cols=36  Identities=19%  Similarity=0.344  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.||||.+|+.+++.|.++.+....+.++...
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~   37 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASA   37 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecc
Confidence            579999999999999999999965555555555543

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.10  E-value=0.025  Score=31.54  Aligned_cols=34  Identities=24%  Similarity=0.400  Sum_probs=27.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |.|.|+||-||+..++-+.+. |+-.+|+.++-..
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~-~d~f~v~~Lsa~~   34 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKH-PDKFEVVALSAGS   34 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHC-TTTEEEEEEEESS
T ss_pred             CEEEcCCcHHHHHHHHHHHhC-CCceEEEEEEcCC
Confidence            579999999999999998876 4456888887653

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.016  Score=36.43  Aligned_cols=38  Identities=16%  Similarity=0.283  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|.|.|.+|.+|+-++..|+++   ++.|++..+...
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~---gatVtv~~~~t~  194 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQA---HCSVTVVHSRST  194 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEECCCCC
Confidence            67899999999999999999999997   689998866543

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.09  E-value=0.012  Score=37.78  Aligned_cols=35  Identities=20%  Similarity=0.465  Sum_probs=27.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++.|.||+||.|..|++.|..+ |+. +++..+.+.
T Consensus         3 ~kV~IvGasGYtG~EL~rlL~~H-p~v-e~~~~ss~~   37 (349)
T COG0002           3 IKVGIVGASGYTGLELLRLLAGH-PDV-ELILISSRE   37 (349)
T ss_pred             ceEEEEcCCCCcHHHHHHHHhcC-CCe-EEEEeechh
Confidence            58999999999999999999997 554 455555433

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.019  Score=36.06  Aligned_cols=37  Identities=22%  Similarity=0.327  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE-eCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~-r~~   50 (67)
                      +++++|+|.|.++.+|+-++..|+++   ++.|++.. |.+
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~---g~tVtv~~~rT~  193 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAA---NATVTIAHSRTR  193 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhC---CCEEEEECCCCC
Confidence            67899999999999999999999987   67888884 543

>KOG1209|consensus

Probab=96.09  E-value=0.018  Score=35.26  Aligned_cols=36  Identities=25%  Similarity=0.397  Sum_probs=30.2

Q ss_pred             CCeEEEEc-CCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTG-GTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitG-a~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.|+||| +.|.||.+++++|.+.   |+.|++.+|+-+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~---G~~V~AtaR~~e   43 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARN---GYLVYATARRLE   43 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhC---CeEEEEEccccc
Confidence            46788886 6789999999999997   789999998754

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.05  E-value=0.023  Score=35.54  Aligned_cols=37  Identities=16%  Similarity=0.275  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|+++.+|+-+...|+..   +..|+++.+..
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~---gatVtv~~s~t  192 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQK---NASVTILHSRS  192 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHC---CCeEEEEeCCc
Confidence            67899999999999999999999987   57888877653

>KOG1210|consensus

Probab=96.00  E-value=0.0093  Score=37.86  Aligned_cols=36  Identities=31%  Similarity=0.354  Sum_probs=32.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+++|||++..+|..++..+..+   ++.|+++.|+...
T Consensus        34 ~hi~itggS~glgl~la~e~~~~---ga~Vti~ar~~~k   69 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKRE---GADVTITARSGKK   69 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHc---cCceEEEeccHHH
Confidence            48999999999999999999997   7899999998653

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.00  E-value=0.026  Score=33.25  Aligned_cols=40  Identities=23%  Similarity=0.302  Sum_probs=32.3

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +..+++++|+|.| .|.+|+++++.|...+  ..+++++|.+.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d~   55 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDDH   55 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCCE
Confidence            4557788999997 6778999999999973  46899998863

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.00  E-value=0.017  Score=36.68  Aligned_cols=40  Identities=30%  Similarity=0.478  Sum_probs=32.4

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+++++|+|.|+ |.+|+++++.|...+  ..+++++|++.
T Consensus        19 Q~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~   58 (338)
T PRK12475         19 QRKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDY   58 (338)
T ss_pred             HHhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCc
Confidence            44577889999986 668999999999972  45899999864

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.00  E-value=0.029  Score=32.94  Aligned_cols=37  Identities=19%  Similarity=0.353  Sum_probs=26.4

Q ss_pred             ccCCeEEEEc----------------CCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTG----------------GTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitG----------------a~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+                ++|..|.++++++..+   |++|+++..+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~---Ga~V~li~g~~   53 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARR---GAEVTLIHGPS   53 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHT---T-EEEEEE-TT
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHC---CCEEEEEecCc
Confidence            3567777774                4799999999999998   78999988763

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.99  E-value=0.037  Score=31.90  Aligned_cols=38  Identities=18%  Similarity=0.139  Sum_probs=31.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++++.|. |.|-||+.+++.+...   +.+|+..+|...
T Consensus        33 ~l~g~tvgIi-G~G~IG~~vA~~l~~f---G~~V~~~d~~~~   70 (178)
T PF02826_consen   33 ELRGKTVGII-GYGRIGRAVARRLKAF---GMRVIGYDRSPK   70 (178)
T ss_dssp             -STTSEEEEE-STSHHHHHHHHHHHHT---T-EEEEEESSCH
T ss_pred             ccCCCEEEEE-EEcCCcCeEeeeeecC---CceeEEecccCC
Confidence            3568899999 5599999999999987   679999999765

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.98  E-value=0.021  Score=36.03  Aligned_cols=35  Identities=20%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|.|+|++|.+|+.++..|... .-+.++.++|.++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~-~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQ-PYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhC-CCCcEEEEecCCC
Confidence            4889999999999999988776 3346899998865

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.97  E-value=0.038  Score=28.22  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=29.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +.+++++|.|+ |.+|+.++..+.+..  +.+|++.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~--~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEG--GKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcC
Confidence            56789999999 999999999999872  467888777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.95  E-value=0.024  Score=34.67  Aligned_cols=36  Identities=14%  Similarity=0.118  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.||+|.+|..+++.+...   +.+|+++++++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~---G~~vi~~~~s~  178 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIK---GCKVIGCAGSD  178 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999998887776   56788777653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.95  E-value=0.062  Score=35.17  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=29.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+ |.+|..++..|.++   +.+|+++++.+
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~---G~~V~~~d~~~   49 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLEL---GARVTVVDDGD   49 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            56788999986 88999999888876   67899988654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.93  E-value=0.025  Score=33.47  Aligned_cols=40  Identities=20%  Similarity=0.259  Sum_probs=32.0

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+.++.++|+|.|+ |.+|+.++..|...+  ..+|+++|.+
T Consensus        15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D   54 (200)
T TIGR02354        15 IVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFD   54 (200)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCC
Confidence            345577889999977 668999999999972  4579999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.93  E-value=0.021  Score=34.96  Aligned_cols=34  Identities=21%  Similarity=0.301  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|.|+ |-+|..+...|.+.   +++|++++|+++
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~---g~~V~~~~r~~~   34 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQA---GHDVTLVARRGA   34 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECChH
Confidence            46889986 99999999999886   689999998643

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.91  E-value=0.028  Score=34.64  Aligned_cols=36  Identities=8%  Similarity=0.047  Sum_probs=28.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~---G~~Vi~~~~s~  173 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLK---GCKVVGAAGSD  173 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4678999999999999998877665   56788777653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN02256 arogenate dehydrogenase

Probab=95.87  E-value=0.025  Score=35.42  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.++|.|.| .|.+|..++..|.+.   +.+|+++++++
T Consensus        34 ~~~~kI~IIG-~G~mG~slA~~L~~~---G~~V~~~d~~~   69 (304)
T PLN02256         34 SRKLKIGIVG-FGNFGQFLAKTFVKQ---GHTVLATSRSD   69 (304)
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhC---CCEEEEEECcc
Confidence            4567899998 799999999999876   46898888874

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.86  E-value=0.02  Score=35.41  Aligned_cols=34  Identities=15%  Similarity=0.052  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      .+++|+||+|.+|...++.+...   +. +|+++++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~---G~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLL---GCSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHc---CCCEEEEEcCCH
Confidence            79999999999999999877765   55 788877653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.84  E-value=0.049  Score=35.19  Aligned_cols=37  Identities=14%  Similarity=0.080  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...+|.|.|.+|.+|.++.+.|.+..  +.+|+.+++..
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~--~~~V~g~D~~d   39 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRM--QLEVIGHDPAD   39 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcC--CCEEEEEcCCc
Confidence            45689999999999999999998752  56899988753

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.83  E-value=0.041  Score=29.62  Aligned_cols=33  Identities=24%  Similarity=0.534  Sum_probs=25.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      ++.|+|++|.+|..+++.+.+. ++ .++..+ +++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~-~~-~~l~av~~~~   34 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEH-PD-FEVVALAASA   34 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcC-CC-ceEEEEEech
Confidence            4789999999999999998885 23 456665 443

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=95.78  E-value=0.024  Score=35.72  Aligned_cols=33  Identities=21%  Similarity=0.243  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +.++||+||+|.+|...++.+...   +..+++...
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~---G~~~v~~~~  175 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKAL---GATVVAVVS  175 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHc---CCcEEEEec
Confidence            689999999999999999988887   434444443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=95.77  E-value=0.027  Score=35.62  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=28.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCC----cceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~----~~~v~~~~r~~~   51 (67)
                      +|.|+|++|.+|+.++..|....-.    -.+++++|+.+.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            4899999999999999998874210    116889998544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=95.66  E-value=0.036  Score=35.35  Aligned_cols=32  Identities=22%  Similarity=0.267  Sum_probs=27.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+| .|++|..++.+|.+.   +.+|++++|..
T Consensus         3 ~vvIIG-aG~~G~~~A~~La~~---g~~V~vle~~~   34 (410)
T PRK12409          3 HIAVIG-AGITGVTTAYALAQR---GYQVTVFDRHR   34 (410)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHC---CCeEEEEeCCC
Confidence            678885 599999999999997   68999999874

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.61  E-value=0.022  Score=35.04  Aligned_cols=34  Identities=18%  Similarity=0.199  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |.+|..++..|++.   +++|++.++++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~---G~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVS---GFQTTLVDIKQE   35 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhC---CCcEEEEeCCHH
Confidence            46888877 99999999999987   689999998765

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=95.58  E-value=0.041  Score=33.08  Aligned_cols=37  Identities=16%  Similarity=0.241  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++|+|++|.+|..+++.+...   +.+|+++++++
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~  179 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWA---GARVIATASSA  179 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            35789999999999999999888776   46788887743

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.57  E-value=0.067  Score=33.36  Aligned_cols=37  Identities=11%  Similarity=0.254  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ++|.|.|+ |.+|+.++..|+..+ -.++|++++++++.
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g-~~~ei~l~D~~~~~   37 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQG-IADELVLIDINEEK   37 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcch
Confidence            36889986 999999999998862 12589999997653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.54  E-value=0.035  Score=34.89  Aligned_cols=36  Identities=11%  Similarity=0.105  Sum_probs=28.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|.+|...++.+...   +.+|+++++++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~---G~~Vi~~~~~~  193 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLH---GCYVVGSAGSS  193 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence            4678999999999999998877766   56787776543

>KOG1198|consensus

Probab=95.53  E-value=0.039  Score=35.26  Aligned_cols=26  Identities=27%  Similarity=0.417  Sum_probs=22.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      -+++.+||.||+|.+|++.++-+...
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~  181 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHA  181 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhc
Confidence            45679999999999999999887776

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.51  E-value=0.04  Score=34.46  Aligned_cols=38  Identities=29%  Similarity=0.449  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|+|.|+ |-+|..+++.|...  ....|++++|++.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~--g~~~V~v~~r~~~  213 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAK--GVAEITIANRTYE  213 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHc--CCCEEEEEeCCHH
Confidence            46889999987 99999999999874  2468999998754

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.50  E-value=0.048  Score=32.63  Aligned_cols=39  Identities=21%  Similarity=0.379  Sum_probs=31.1

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++.+++++|+|.| .|.+|+++++.|...+  ..+++++|.+
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D   54 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDD   54 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCC
Confidence            4557778999996 6778999999999973  5688888764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.49  E-value=0.032  Score=34.21  Aligned_cols=34  Identities=24%  Similarity=0.231  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|.| .|.+|..++..|.+.   +++|++.++++.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~---g~~V~~~d~~~~   34 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSL---GHTVYGVSRRES   34 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            3688886 899999999999887   578999998643

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.44  E-value=0.033  Score=34.47  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ++|.|.|+ |.+|..++..++..   ++.|++.+++++.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~---G~~V~l~d~~~~~   40 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARA---GVDVLVFETTEEL   40 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhC---CCEEEEEECCHHH
Confidence            47889976 99999999999987   7899999998764

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.43  E-value=0.11  Score=32.75  Aligned_cols=36  Identities=14%  Similarity=0.132  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|+ |.+|..++..|+.. +-..++.+++.+++
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~-~~~~el~LiD~~~~   39 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAK-GLADELVLVDVVED   39 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcc
Confidence            47999996 99999999988876 34468999998764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.42  E-value=0.036  Score=31.21  Aligned_cols=37  Identities=24%  Similarity=0.328  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|.+.-+|+-++..|.++   +..|++..+..
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~---gatV~~~~~~t   62 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRD---GATVYSCDWKT   62 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEeCCCC
Confidence            67899999999999999999999986   57888876543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.42  E-value=0.076  Score=33.43  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+.++|.|+|| |.+|..+...+....  ..+|.+++.+++.
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~   41 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGV   41 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCcc
Confidence            35678999997 999999988877762  2579999987653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.41  E-value=0.051  Score=33.88  Aligned_cols=37  Identities=22%  Similarity=0.201  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|. |.+|+.++..|...   +.+|++.+|++.
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~---Ga~V~v~~r~~~  186 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKAL---GANVTVGARKSA  186 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            45789999986 78999999999887   569999998753

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.41  E-value=0.051  Score=33.97  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|.|+ |.+|..++..|+..+ -..+|.++++++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g-~~~ev~l~D~~~~   36 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRG-LASEIVLVDINKA   36 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CCCEEEEEECCch
Confidence            47899998 999999999988862 2368999998764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.41  E-value=0.035  Score=33.32  Aligned_cols=34  Identities=21%  Similarity=0.404  Sum_probs=27.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++|.| .|-+|..+++.|.+.   ++.|+++++++.
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~---g~~Vv~Id~d~~   34 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEE---GHNVVLIDRDEE   34 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhC---CCceEEEEcCHH
Confidence            4566665 566699999999997   789999998754

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.40  E-value=0.056  Score=33.61  Aligned_cols=38  Identities=13%  Similarity=0.219  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++|.|+ |..+++++..|.+.  +..+|++++|...
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~--g~~~i~i~nR~~~  162 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTH--GVQKLQVADLDTS  162 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHC--CCCEEEEEcCCHH
Confidence            44678999987 77899999999986  2468999999754

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=95.36  E-value=0.058  Score=32.37  Aligned_cols=36  Identities=14%  Similarity=0.134  Sum_probs=29.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++.+++|+|++|.+|..+++.+...   +.+|++++++
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~---g~~v~~~~~~  173 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKAL---GARVIATAGS  173 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHc---CCEEEEEcCC
Confidence            35679999999999999999988886   5678877765

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=95.36  E-value=0.026  Score=33.38  Aligned_cols=29  Identities=14%  Similarity=0.268  Sum_probs=25.5

Q ss_pred             cCC--ChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         20 GGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        20 Ga~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |++  +.||..+++.|++.   +++|++.+|+..
T Consensus         1 g~~~s~GiG~aia~~l~~~---Ga~V~~~~~~~~   31 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEE---GANVILTDRNEE   31 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHT---TEEEEEEESSHH
T ss_pred             CCCCCCChHHHHHHHHHHC---CCEEEEEeCChH
Confidence            555  99999999999998   789999999865

...

>PRK00711 D-amino acid dehydrogenase small subunit; Validated

Probab=95.36  E-value=0.054  Score=34.47  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=27.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |.|+|.| .|++|..++.+|.++   +.+|.++++..
T Consensus         1 ~~v~IVG-~Gi~Gls~A~~l~~~---g~~V~vle~~~   33 (416)
T PRK00711          1 MRVVVLG-SGVIGVTSAWYLAQA---GHEVTVIDRQP   33 (416)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            3577885 599999999999887   67999999964

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.35  E-value=0.035  Score=33.90  Aligned_cols=35  Identities=29%  Similarity=0.360  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++|.|++|.+|..+++.+...   +.+|+++++.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~---g~~v~~~~~~~  181 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKL---GYEVVASTGKA  181 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC---CCeEEEEecCH
Confidence            568999999999999998887776   56788877654

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=95.32  E-value=0.051  Score=35.13  Aligned_cols=35  Identities=14%  Similarity=0.201  Sum_probs=25.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhh-CCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~-~~~~~~v~~~~r   48 (67)
                      ++|.|.||||.+|+.+++.|.+. +=...+++.++.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss   36 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFST   36 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEc
Confidence            46899999999999999998843 212234555544

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.31  E-value=0.024  Score=36.60  Aligned_cols=34  Identities=15%  Similarity=0.305  Sum_probs=25.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc--ceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI--GAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~--~~v~~~~r   48 (67)
                      ++|.|.||||++|+.+++.+++.. ..  .++..++.
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~-~f~~~~l~~~ss   37 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEEN-DFDLIEPVFFST   37 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCC-CCCcCcEEEecc
Confidence            478999999999999999777753 22  23555554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.30  E-value=0.056  Score=35.18  Aligned_cols=38  Identities=34%  Similarity=0.586  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|+ |-+|..+++.|...  +..+|++++|+..
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~--G~~~V~v~~rs~~  215 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRK--GVGKILIANRTYE  215 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHC--CCCEEEEEeCCHH
Confidence            56789999987 99999999999886  2368999998754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.29  E-value=0.061  Score=34.07  Aligned_cols=38  Identities=18%  Similarity=0.075  Sum_probs=31.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++++.|.|- |-||+.+++.+...   +.+|++.+|.+.
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~---G~~V~~~d~~~~  184 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGF---GMRILYYSRTRK  184 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHC---CCEEEEECCCCC
Confidence            367899999976 99999999999886   578999888643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.27  E-value=0.07  Score=29.47  Aligned_cols=33  Identities=30%  Similarity=0.399  Sum_probs=26.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|.|. |.+|+++++.|...+  ..+++++|.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~G--v~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSG--VGKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCC--CCEEEEEcCCC
Confidence            4778875 889999999999973  45898888753

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.26  E-value=0.048  Score=34.85  Aligned_cols=40  Identities=25%  Similarity=0.339  Sum_probs=32.2

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +..+++.+|+|.|+ |.+|+.+++.|...  +..+++++|.+.
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~--Gvg~i~lvD~D~   62 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGA--GVGHITIIDDDT   62 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHc--CCCeEEEEeCCE
Confidence            44577889999976 77899999999987  356899988864

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.26  E-value=0.069  Score=33.05  Aligned_cols=38  Identities=18%  Similarity=0.141  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|.|+ |..|+.++..|.+.+  ..+|+++.|+.+
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~~  160 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNPD  160 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCHH
Confidence            45788999976 777999999999872  468999999754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.25  E-value=0.087  Score=32.81  Aligned_cols=38  Identities=11%  Similarity=0.148  Sum_probs=29.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++|.|+ |..+++++..|...  ...+|++++|++.
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~--g~~~i~i~nRt~~  159 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIE--GLKEIKLFNRRDE  159 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC--CCCEEEEEeCCcc
Confidence            45688999987 55599999988876  2468999999754

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.24  E-value=0.073  Score=33.77  Aligned_cols=36  Identities=19%  Similarity=0.142  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|| |.||+.++..|+.+. -+.++++++..+.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~-~~~el~LiDi~~~   36 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQG-LGSELVLIDINEE   36 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhccc-ccceEEEEEcccc
Confidence            47999999 999999999996652 3348999998743

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.24  E-value=0.07  Score=33.09  Aligned_cols=38  Identities=18%  Similarity=0.157  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++|.|+ |..|++++..|...+  ..+|++++|+..
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~~  162 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDPA  162 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCHH
Confidence            45678999976 668999999999872  458999999754

>KOG1199|consensus

Probab=95.23  E-value=0.069  Score=31.87  Aligned_cols=40  Identities=20%  Similarity=0.250  Sum_probs=34.4

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...++...+|||+...+|+...+.|.++   +..|.+++-+.+
T Consensus         5 rs~kglvalvtggasglg~ataerlakq---gasv~lldlp~s   44 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQ---GASVALLDLPQS   44 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhc---CceEEEEeCCcc
Confidence            3467788999999999999999999998   678888887655

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.21  E-value=0.066  Score=32.60  Aligned_cols=37  Identities=22%  Similarity=0.120  Sum_probs=29.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKKG   52 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~~   52 (67)
                      |.|+||.|.+|..++..|+.... ...+|+++|.++..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~   38 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEK   38 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCccc
Confidence            47899999999999999988621 23689999987653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.21  E-value=0.043  Score=33.83  Aligned_cols=34  Identities=18%  Similarity=0.240  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.| .|.+|..++..|+..   +++|++.++++.
T Consensus         5 ~~V~vIG-~G~mG~~iA~~l~~~---G~~V~~~d~~~~   38 (295)
T PLN02545          5 KKVGVVG-AGQMGSGIAQLAAAA---GMDVWLLDSDPA   38 (295)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence            5788885 599999999999987   689999998764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.19  E-value=0.065  Score=35.52  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=29.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|+ |.+|+.++..|.+.   +.+|++.+|+.
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~---G~~V~i~~R~~  365 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARA---GAELLIFNRTK  365 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            45689999995 89999999999987   46888888764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.17  E-value=0.065  Score=35.24  Aligned_cols=37  Identities=19%  Similarity=0.139  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|. |.+|+.++..+...   +.+|++.++++.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~---Ga~ViV~d~dp~  246 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGL---GARVIVTEVDPI  246 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEcCCch
Confidence            47889999985 89999999999887   568999888754

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.17  E-value=0.071  Score=32.16  Aligned_cols=36  Identities=14%  Similarity=0.164  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+++|+|++|.+|..+++.+...   +.++++++++.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~---g~~v~~~~~~~  179 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAA---GATVIATTRTS  179 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence            4678999999999999999988776   56788877653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.13  E-value=0.11  Score=32.56  Aligned_cols=34  Identities=26%  Similarity=0.265  Sum_probs=27.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~---G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLR---GFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCeEEEEecC
Confidence            5678999985 99999999776665   4588888874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.13  E-value=0.057  Score=32.17  Aligned_cols=39  Identities=21%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ...++..+|+|.|+ |.+|+.+++.|...+  ..+++++|.+
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~G--vg~i~lvD~D   61 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSG--VGNLKLVDFD   61 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence            34567788999974 778999999999973  5689998886

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.13  E-value=0.074  Score=34.62  Aligned_cols=35  Identities=26%  Similarity=0.412  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.|+||.||...++-+.+. ++..+|.++.-+
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~-p~~f~VvaLaa~   36 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRN-PDRFRVVALSAG   36 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhC-ccccEEEEEEcC
Confidence            58999999999999999887764 444688888743

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.13  E-value=0.087  Score=26.99  Aligned_cols=36  Identities=31%  Similarity=0.344  Sum_probs=26.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~~~   51 (67)
                      +|.++ |+|-+|..+++.|++.+...++|+.. +|+++
T Consensus         1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~   37 (96)
T PF03807_consen    1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPE   37 (96)
T ss_dssp             EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHH
T ss_pred             CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHH
Confidence            46667 89999999999999982112788865 67643

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.12  E-value=0.055  Score=31.83  Aligned_cols=36  Identities=19%  Similarity=0.244  Sum_probs=29.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.+++|+|+.+ +|..+++.+...   +.+|+++++++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~---g~~v~~~~~~~  168 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAA---GARVIVTDRSD  168 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHc---CCeEEEEcCCH
Confidence            3467899999999 999999887776   57888887764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.10  E-value=0.051  Score=33.44  Aligned_cols=35  Identities=14%  Similarity=0.041  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|.|.|+ |.+|..++..|+..   +++|++.+++++
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~---G~~V~l~d~~~~   38 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALA---GYDVLLNDVSAD   38 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            467888865 99999999999987   689999998754

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.09  E-value=0.081  Score=32.80  Aligned_cols=35  Identities=17%  Similarity=0.095  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|+ |.+|..++..+.... -+ +|++++++++
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~-~~-ev~L~D~~~~   37 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKE-LG-DVVLFDIVEG   37 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-Ce-EEEEEECCCc
Confidence            58999998 999999999988762 13 8999999655

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.09  E-value=0.068  Score=34.51  Aligned_cols=36  Identities=22%  Similarity=0.390  Sum_probs=30.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++++|.|+ |.+|+.+++.|.+.   ++.|+++++++.
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~---~~~v~vid~~~~  265 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKE---GYSVKLIERDPE  265 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            3568999988 99999999998886   578999988754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.07  E-value=0.11  Score=28.50  Aligned_cols=34  Identities=29%  Similarity=0.495  Sum_probs=26.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++|+|.| .|.+|+.+++.|...+  ..+++++|.+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~G--v~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSG--VGKITLVDDD   35 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHT--TSEEEEEESS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhC--CCceeecCCc
Confidence            46788885 5667999999999983  5689998874

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.07  E-value=0.039  Score=34.51  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|.++.+|+-+...|+.+   +..|++....
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVt~~hs~  191 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQA---GATVTICHSK  191 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEecCC
Confidence            67899999999999999999999887   5678765443

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.07  E-value=0.045  Score=33.53  Aligned_cols=34  Identities=18%  Similarity=0.119  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |.+|..++..++..   +++|+++++++.
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~---g~~V~~~d~~~~   37 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVA---GYDVVMVDISDA   37 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHC---CCceEEEeCCHH
Confidence            46888865 99999999999987   578999988755

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.05  E-value=0.086  Score=31.71  Aligned_cols=37  Identities=19%  Similarity=0.307  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~   50 (67)
                      +++++++|.|| |..|+.++..|.+.  +..  +|++++|+.
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~--G~~~~~i~ivdr~g   61 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAA--GAKPENIVVVDSKG   61 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHc--CcCcceEEEEeCCC
Confidence            67789999988 88899999999886  245  899999983

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.01  E-value=0.13  Score=32.26  Aligned_cols=33  Identities=18%  Similarity=0.328  Sum_probs=29.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   46 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~   46 (67)
                      +.+++++|.|.+|.+|+-+...|+++   ++.|++.
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~---gatVtv~  188 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDK---NATVTLT  188 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHC---CCEEEEE
Confidence            67899999999999999999999987   5788776

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.01  E-value=0.097  Score=32.54  Aligned_cols=38  Identities=29%  Similarity=0.472  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|.|.|++|-.|+.+++.+.+. ++..-+-+++|.++
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCc
Confidence            358999999999999999998886 44445666777654

>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Probab=95.00  E-value=0.072  Score=34.73  Aligned_cols=36  Identities=31%  Similarity=0.452  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|.|.|+||.||...++-+.+. ++..+|.+++-..
T Consensus         2 k~i~IlGsTGSIG~qtL~Vi~~~-~~~f~v~~Laa~~   37 (389)
T TIGR00243         2 KQIVILGSTGSIGKSTLDVVRHN-PDHFQVVALSAGK   37 (389)
T ss_pred             ceEEEEecChHHHHHHHHHHHhC-ccccEEEEEEcCC
Confidence            57999999999999999887664 4446888887643

1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.96  E-value=0.1  Score=30.10  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=27.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++|+++|.|.+..+|+-+...|.++   +..|+.....
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~---~atVt~~h~~   69 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNK---GATVTICHSK   69 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHT---T-EEEEE-TT
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhC---CCeEEeccCC
Confidence            67899999999999999999999987   5677775544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=94.95  E-value=0.19  Score=33.31  Aligned_cols=40  Identities=23%  Similarity=0.209  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhC------CCcceEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSF------PDIGAIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~------~~~~~v~~~~r~~~~   52 (67)
                      .-+|.|+|++|.+|.+++..|+...      +-..+++.++++.+.
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~  145 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQA  145 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcch
Confidence            3589999999999999999988751      122478888887663

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.94  E-value=0.071  Score=32.65  Aligned_cols=37  Identities=14%  Similarity=0.089  Sum_probs=29.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++.+++|.|++|-+|..+++.+...   +.+|+++++++
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~---g~~v~~~~~~~  174 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLA---GCHVIGTCSSD  174 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHc---CCeEEEEeCcH
Confidence            35678999999999999988877775   46788877653

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.91  E-value=0.076  Score=32.69  Aligned_cols=34  Identities=15%  Similarity=0.122  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.| +|.+|..++..|...   +++|+++++++.
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~   37 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFH---GFDVTIYDISDE   37 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence            5788996 499999999999886   689999998754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=94.84  E-value=0.096  Score=31.54  Aligned_cols=36  Identities=14%  Similarity=0.214  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+|++|.+|..+++.+...   +.+|+++.+++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~  174 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAF---GARVFTTAGSD  174 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999988877776   56888877653

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=94.83  E-value=0.076  Score=32.81  Aligned_cols=34  Identities=29%  Similarity=0.309  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|.| .|.+|..++..|.+.   ++.|++++|++.
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~---g~~V~~~~r~~~   35 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARN---GHDVTLWARDPE   35 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence            4788997 599999999999986   678999998643

>KOG0023|consensus

Probab=94.83  E-value=0.12  Score=33.24  Aligned_cols=36  Identities=11%  Similarity=0.131  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++.+.|+|+.| +|+--++.....   +.+|+++++...
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAM---G~rV~vis~~~~  216 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAM---GMRVTVISTSSK  216 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHh---CcEEEEEeCCch
Confidence            578999999999 999888887776   789999999863

>PRK08328 hypothetical protein; Provisional

Probab=94.78  E-value=0.1  Score=31.41  Aligned_cols=39  Identities=18%  Similarity=0.283  Sum_probs=30.1

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++.+|+|.|+ |.+|+++++.|...+  ..+++++|.+.
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~G--vg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAG--VGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCc
Confidence            4466778999854 567999999999973  56898888654

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.77  E-value=0.12  Score=32.12  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=30.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|.|. |.|.+|+.+...|.+.   +++|++.+|+..
T Consensus         3 ~~m~I~ii-G~G~~G~~lA~~l~~~---G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAIL-GAGAWGSTLAGLASAN---GHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEE-CccHHHHHHHHHHHHC---CCEEEEEeCCCC
Confidence            45789888 6699999999999987   689999998754

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.76  E-value=0.11  Score=32.95  Aligned_cols=38  Identities=13%  Similarity=0.036  Sum_probs=31.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++++.|.| .|.+|+.+++.|...   +.+|++.+|.+.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~---G~~V~~~d~~~~  180 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGF---GATITAYDAYPN  180 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEeCChh
Confidence            35778999985 699999999999876   689999998754

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.75  E-value=0.11  Score=31.58  Aligned_cols=40  Identities=18%  Similarity=0.305  Sum_probs=31.3

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+++.+|+|.| .|.+|+.+++.|...+  ..+++++|.+.
T Consensus        19 q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~   58 (240)
T TIGR02355        19 QEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDT   58 (240)
T ss_pred             HHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCc
Confidence            4457778898885 5667999999999973  56899988864

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=94.72  E-value=0.094  Score=32.07  Aligned_cols=36  Identities=8%  Similarity=0.078  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|.+|..+++.+...   +.+|+++++++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~---G~~vi~~~~~~  180 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLL---GARVVGIAGSD  180 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4678999999999999998888776   56788877643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PLN02602 lactate dehydrogenase

Probab=94.71  E-value=0.23  Score=31.89  Aligned_cols=36  Identities=14%  Similarity=0.222  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|+ |.+|+.++..++.. +-..++.+++.+++
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~-~l~~el~LiDi~~~   73 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQ-DLADELALVDVNPD   73 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCCCc
Confidence            58999996 99999999998876 33458999998764

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.71  E-value=0.083  Score=32.55  Aligned_cols=34  Identities=24%  Similarity=0.270  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.| +|.+|..++..|+..   +++|+++++++.
T Consensus         4 ~~I~ViG-aG~mG~~iA~~la~~---G~~V~l~d~~~~   37 (291)
T PRK06035          4 KVIGVVG-SGVMGQGIAQVFART---GYDVTIVDVSEE   37 (291)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhc---CCeEEEEeCCHH
Confidence            5788885 599999999999987   679999998765

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=94.69  E-value=0.11  Score=31.57  Aligned_cols=37  Identities=14%  Similarity=0.064  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.+++|+|+++.+|..+++.+...   +.+|+++++++
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~---g~~v~~~~~~~  201 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLF---GATVIATAGSE  201 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            34678999999999999999988886   56788777653

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.66  E-value=0.1  Score=34.13  Aligned_cols=38  Identities=21%  Similarity=0.313  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|+ |-.|+.++..|...+  ...|++..|...
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g--~~~I~V~nRt~~  216 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALA--PKQIMLANRTIE  216 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEECCCHH
Confidence            56789999988 888999999998862  358999999754

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.65  E-value=0.067  Score=34.06  Aligned_cols=35  Identities=20%  Similarity=0.148  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+|.| ||||-+|+.+++.|-++.-...+++++...
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~   38 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE   38 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence            47899 999999999999888764333456665543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.067  Score=33.50  Aligned_cols=37  Identities=16%  Similarity=0.152  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|.|.+..+|+-+...|+.+   +..|++..+..
T Consensus       157 l~Gk~vvViGrs~iVG~Pla~lL~~~---~atVtv~hs~T  193 (285)
T PRK10792        157 TYGLNAVVVGASNIVGRPMSLELLLA---GCTVTVCHRFT  193 (285)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHC---CCeEEEEECCC
Confidence            67899999999999999999999886   46888776543

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.62  E-value=0.068  Score=33.43  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|.+..+|+-+...|+++   +..|++..+..
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~---~ATVt~chs~T  192 (282)
T PRK14180        156 TEGAYAVVVGASNVVGKPVSQLLLNA---KATVTTCHRFT  192 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEEcCCC
Confidence            67899999999999999999999886   46777765443

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.56  E-value=0.093  Score=30.64  Aligned_cols=33  Identities=24%  Similarity=0.246  Sum_probs=25.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|. |.||+|.-++..|.+.   |++|+.++.++
T Consensus         1 M~I~Vi-GlGyvGl~~A~~lA~~---G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVI-GLGYVGLPLAAALAEK---GHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHT---TSEEEEE-S-H
T ss_pred             CEEEEE-CCCcchHHHHHHHHhC---CCEEEEEeCCh
Confidence            578888 8999999999999998   79999999864

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=94.56  E-value=0.21  Score=31.39  Aligned_cols=35  Identities=17%  Similarity=0.342  Sum_probs=28.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|.|.|+ |.+|..++..|+.. +-..++.+++..++
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~-~~~~elvL~Di~~~   35 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALAL-GLFSEIVLIDVNEG   35 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCcc
Confidence            4789998 99999999998885 33468999998655

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=94.54  E-value=0.15  Score=31.37  Aligned_cols=35  Identities=26%  Similarity=0.395  Sum_probs=26.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.|++|.+|+.+++.+.+. ++..-+-+++|.
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~-~~~elvav~d~~   36 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAA-EGLQLVAAFERH   36 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence            47999999999999999998875 344344455644

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.52  E-value=0.084  Score=32.14  Aligned_cols=35  Identities=29%  Similarity=0.438  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++|.|++|.+|..+++.+...   +.+|+++++++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~---g~~v~~~~~~~  181 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKL---GYTVVALTGKE  181 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            358999999999999998877665   45788877754

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN02712 arogenate dehydrogenase

Probab=94.47  E-value=0.12  Score=35.70  Aligned_cols=36  Identities=17%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++++|.|+| .|.+|..+++.|.+.   +++|++.+|+.
T Consensus       367 ~~~~kIgIIG-lG~mG~slA~~L~~~---G~~V~~~dr~~  402 (667)
T PLN02712        367 GSKLKIAIVG-FGNFGQFLAKTMVKQ---GHTVLAYSRSD  402 (667)
T ss_pred             CCCCEEEEEe-cCHHHHHHHHHHHHC---cCEEEEEECCh
Confidence            4568999998 899999999999886   57899988874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=94.46  E-value=0.073  Score=33.20  Aligned_cols=37  Identities=16%  Similarity=0.221  Sum_probs=28.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...+  ..+|+++++++.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G--~~~Vi~~~~~~~  205 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLG--AAEIVCADVSPR  205 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC--CcEEEEEeCCHH
Confidence            4678999986 999999998877761  236888887643

>PRK08223 hypothetical protein; Validated

Probab=94.39  E-value=0.1  Score=32.75  Aligned_cols=40  Identities=25%  Similarity=0.278  Sum_probs=31.4

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+++.+|+|.|+ |.+|+.++++|...+  ..+++++|.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aG--VG~i~lvD~D~   61 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLG--IGKFTIADFDV   61 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhC--CCeEEEEeCCC
Confidence            44577888999965 556999999999983  56898888764

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.38  E-value=0.07  Score=33.36  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=28.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|+ |.+|...++.+...   +.+|+++++++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~---G~~vi~~~~~~  200 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAM---GAAVVAIDIDP  200 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCeEEEEcCCH
Confidence            3678999999 99999998887776   45788877653

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.084  Score=33.13  Aligned_cols=37  Identities=14%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|.|.+..+|+-+...|+.+   +..|++.....
T Consensus       162 l~Gk~vvViGrs~iVGkPla~lL~~~---~atVtv~hs~T  198 (287)
T PRK14176        162 IEGKNAVIVGHSNVVGKPMAAMLLNR---NATVSVCHVFT  198 (287)
T ss_pred             CCCCEEEEECCCcccHHHHHHHHHHC---CCEEEEEeccC
Confidence            57899999999999999999999886   46777766543

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.36  E-value=0.14  Score=31.35  Aligned_cols=38  Identities=21%  Similarity=0.209  Sum_probs=28.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~~   50 (67)
                      ..|+|.++| .|-+|..++..|++.+ -..++|++.+|++
T Consensus         2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~   40 (279)
T PRK07679          2 SIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN   40 (279)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence            346899996 9999999999999862 0126788888754

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.36  E-value=0.15  Score=31.07  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+|++|.+|..+++.+...   +.+|+++++++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~---g~~v~~~~~~~  177 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAA---GATVVGAAGGP  177 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4678999999999999998887776   56788877643

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.33  E-value=0.075  Score=33.28  Aligned_cols=37  Identities=14%  Similarity=0.164  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|.|.+..+|+-+...|+++   +..|++.....
T Consensus       157 l~Gk~vvViGrS~iVGkPla~lL~~~---~atVt~chs~T  193 (284)
T PRK14177        157 VTGKNAVVVGRSPILGKPMAMLLTEM---NATVTLCHSKT  193 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHC---CCEEEEeCCCC
Confidence            67899999999999999999999986   46777765443

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=94.32  E-value=0.14  Score=32.78  Aligned_cols=38  Identities=16%  Similarity=0.128  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|+ |=+|..++++|.+.+  ..+|++..|...
T Consensus       172 l~~k~vLvIGa-Gem~~l~a~~L~~~g--~~~i~v~nRt~~  209 (338)
T PRK00676        172 SKKASLLFIGY-SEINRKVAYYLQRQG--YSRITFCSRQQL  209 (338)
T ss_pred             ccCCEEEEEcc-cHHHHHHHHHHHHcC--CCEEEEEcCCcc
Confidence            67889999988 999999999999972  368999998754

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.32  E-value=0.079  Score=33.22  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=30.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|.+..+|+=+...|+++   +..|++.-+.
T Consensus       153 l~Gk~vvViGrS~iVGkPla~lL~~~---~aTVtichs~  188 (287)
T PRK14173        153 LAGKEVVVVGRSNIVGKPLAALLLRE---DATVTLAHSK  188 (287)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEeCCC
Confidence            67899999999999999999999886   4677765544

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.31  E-value=0.14  Score=31.73  Aligned_cols=34  Identities=15%  Similarity=0.174  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |.+|..++..|+..   +++|+++++++.
T Consensus         5 ~~I~vIGa-G~mG~~iA~~l~~~---g~~V~~~d~~~~   38 (311)
T PRK06130          5 QNLAIIGA-GTMGSGIAALFARK---GLQVVLIDVMEG   38 (311)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            57888855 99999999999986   578999988654

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=94.30  E-value=0.18  Score=31.36  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=29.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..|+|+|. |.|-+|..+...|.+.   +++|+++.|++
T Consensus         4 ~~m~I~Ii-G~GaiG~~lA~~L~~~---g~~V~~~~r~~   38 (313)
T PRK06249          4 ETPRIGII-GTGAIGGFYGAMLARA---GFDVHFLLRSD   38 (313)
T ss_pred             cCcEEEEE-CCCHHHHHHHHHHHHC---CCeEEEEEeCC
Confidence            34689999 6788999999999886   68999999964

>PLN00203 glutamyl-tRNA reductase

Probab=94.29  E-value=0.13  Score=34.68  Aligned_cols=38  Identities=29%  Similarity=0.489  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|+|.|+ |-+|..+++.|...+  ..+|+++.|+..
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G--~~~V~V~nRs~e  301 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKG--CTKMVVVNRSEE  301 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCC--CCeEEEEeCCHH
Confidence            55789999988 999999999998862  357999988754

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=94.28  E-value=0.11  Score=32.48  Aligned_cols=36  Identities=19%  Similarity=0.192  Sum_probs=26.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|.|+ |.+|...++.+...   +.+|+++++++.
T Consensus       165 ~g~~VlV~G~-g~iG~~a~~~a~~~---G~~vi~~~~~~~  200 (329)
T TIGR02822       165 PGGRLGLYGF-GGSAHLTAQVALAQ---GATVHVMTRGAA  200 (329)
T ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHC---CCeEEEEeCChH
Confidence            4678999997 88998877665554   457888877654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.27  E-value=0.13  Score=31.93  Aligned_cols=38  Identities=34%  Similarity=0.517  Sum_probs=30.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++.+|+|. |.|.+|+++++.|...+  ..++++++.+.
T Consensus        27 kL~~s~VlVv-G~GGVGs~vae~Lar~G--Vg~itLiD~D~   64 (268)
T PRK15116         27 LFADAHICVV-GIGGVGSWAAEALARTG--IGAITLIDMDD   64 (268)
T ss_pred             HhcCCCEEEE-CcCHHHHHHHHHHHHcC--CCEEEEEeCCE
Confidence            4667889888 55778999999999972  47899988753

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.25  E-value=0.16  Score=30.74  Aligned_cols=36  Identities=17%  Similarity=0.207  Sum_probs=29.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|.+|..+++.+...   +.+|+++++++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~---g~~v~~~~~~~  177 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKAL---GATVTATTRSP  177 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999998888776   56788777653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.22  E-value=0.16  Score=31.91  Aligned_cols=34  Identities=15%  Similarity=0.327  Sum_probs=29.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      +.+++++|.|++..+|+-+...|+++   +..|+++.
T Consensus       155 l~Gk~vvVvGrs~~VG~Pla~lL~~~---gAtVtv~h  188 (285)
T PRK14191        155 IKGKDVVIIGASNIVGKPLAMLMLNA---GASVSVCH  188 (285)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHC---CCEEEEEe
Confidence            67899999999999999999999987   56777754

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.22  E-value=0.11  Score=33.79  Aligned_cols=34  Identities=15%  Similarity=0.183  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|. |.|++|..++..|.+.   +++|+++++++.
T Consensus         4 ~kI~VI-GlG~~G~~~A~~La~~---G~~V~~~D~~~~   37 (415)
T PRK11064          4 ETISVI-GLGYIGLPTAAAFASR---QKQVIGVDINQH   37 (415)
T ss_pred             cEEEEE-CcchhhHHHHHHHHhC---CCEEEEEeCCHH
Confidence            578888 5699999999999997   689999998754

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.22  E-value=0.19  Score=31.74  Aligned_cols=39  Identities=15%  Similarity=0.258  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+.++|.|+| +|.+|..++..++...  ...|++++.+++.
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~g--l~~i~LvDi~~~~   42 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKN--LGDVVLFDIVKNI   42 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCC--CCeEEEEeCCCch
Confidence            4557899999 5999999998877752  2469999987764

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.21  E-value=0.089  Score=32.87  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|.+..+|+-+...|+++   +..|++....
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~---~AtVt~chs~  191 (278)
T PRK14172        156 IEGKEVVVIGRSNIVGKPVAQLLLNE---NATVTICHSK  191 (278)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCCC
Confidence            67899999999999999999999886   4677776544

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.20  E-value=0.13  Score=31.12  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=30.9

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++.+|+|.| .|.+|+++++.|...+  ..+++++|.+.
T Consensus         6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~   45 (231)
T cd00755           6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDV   45 (231)
T ss_pred             HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCE
Confidence            3446677898885 5678999999999973  56899888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14031 glutamate dehydrogenase; Provisional

Probab=94.19  E-value=0.17  Score=33.59  Aligned_cols=34  Identities=24%  Similarity=0.355  Sum_probs=28.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++|.|. |-+|.+.++.|.+.   +.+|++++=
T Consensus       226 l~g~rVaVQGf-GNVG~~aA~~L~e~---GAkVVaVSD  259 (444)
T PRK14031        226 LKGKVCLVSGS-GNVAQYTAEKVLEL---GGKVVTMSD  259 (444)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEEC
Confidence            67899999977 99999999999997   678887543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=94.16  E-value=0.076  Score=31.94  Aligned_cols=26  Identities=19%  Similarity=0.447  Sum_probs=22.7

Q ss_pred             cCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         20 GGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        20 Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .++|++|.++++.|+++   |++|+++++
T Consensus        22 ~SSGgIG~AIA~~la~~---Ga~Vvlv~~   47 (227)
T TIGR02114        22 HSTGHLGKIITETFLSA---GHEVTLVTT   47 (227)
T ss_pred             CcccHHHHHHHHHHHHC---CCEEEEEcC
Confidence            45899999999999998   789988875

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1610|consensus

Probab=94.15  E-value=0.13  Score=32.77  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ..++.|+|||.....|..++.+|.+.   +..|++---
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~---Gf~V~Agcl   61 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKK---GFRVFAGCL   61 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhc---CCEEEEEee
Confidence            45678999999999999999999998   678877553

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=94.15  E-value=0.16  Score=33.83  Aligned_cols=35  Identities=23%  Similarity=0.346  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.|+||-||...++-+.+. ++..+|.++.-.
T Consensus        58 KkI~ILGSTGSIGtqtLdVI~~~-pd~f~vvaLaag   92 (454)
T PLN02696         58 KPISLLGSTGSIGTQTLDIVAEN-PDKFKVVALAAG   92 (454)
T ss_pred             cEEEEecCCcHhhHHHHHHHHhC-ccccEEEEEECC
Confidence            68999999999999999987775 444677777654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.15  E-value=0.14  Score=32.45  Aligned_cols=35  Identities=11%  Similarity=0.060  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -++|.|.| +|.+|+.++..++..   |++|++.++++.
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~a---G~~V~l~D~~~~   41 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAH---GLDVVAWDPAPG   41 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence            35788885 599999999999997   789999998764

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.14  E-value=0.13  Score=31.27  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=28.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++|.|++|.+|..+++.+...   +..++++++.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~---G~~v~~~~~~  173 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAAR---GINVINLVRR  173 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHC---CCeEEEEecC
Confidence            4678999999999999999887776   5677777654

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.08  E-value=0.17  Score=32.99  Aligned_cols=38  Identities=26%  Similarity=0.388  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.|+ |-+|..++..|...+  ..+|++.+|++.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G--~~~V~v~~r~~~  217 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKG--VRKITVANRTLE  217 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCC--CCeEEEEeCCHH
Confidence            56789999976 999999999998762  347889888754

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=94.04  E-value=0.21  Score=29.83  Aligned_cols=36  Identities=11%  Similarity=0.171  Sum_probs=28.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++.+++|.|++|.+|..+++.+...   +.+|++++++
T Consensus       143 ~~~~~vlv~g~~g~~g~~~~~~a~~~---g~~v~~~~~~  178 (309)
T cd05289         143 KAGQTVLIHGAAGGVGSFAVQLAKAR---GARVIATASA  178 (309)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHc---CCEEEEEecc
Confidence            35678999999999999998887776   5677777654

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.04  E-value=0.17  Score=30.43  Aligned_cols=36  Identities=14%  Similarity=0.134  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+|++|-+|..+++.+...   +..|++++++.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~  174 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKAL---GARVIAAASSE  174 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHh---CCEEEEEeCCH
Confidence            4678999999999999998887776   56788777653

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.04  E-value=0.27  Score=30.75  Aligned_cols=37  Identities=16%  Similarity=0.263  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++|.||.| .+++++..|++.+  ..+|+++.|..+
T Consensus       125 ~~~~vlilGAGG-AarAv~~aL~~~g--~~~i~V~NRt~~  161 (283)
T COG0169         125 TGKRVLILGAGG-AARAVAFALAEAG--AKRITVVNRTRE  161 (283)
T ss_pred             CCCEEEEECCcH-HHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence            468899997655 5999999999982  468999999765

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.02  E-value=0.13  Score=31.35  Aligned_cols=37  Identities=14%  Similarity=0.062  Sum_probs=29.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.+++|.|++|.+|..+++.+...   +..|++++++.
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~---g~~v~~~~~~~  173 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLL---GFKTINVVRRD  173 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHC---CCeEEEEecCh
Confidence            34678999999999999998888876   56777777654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.00  E-value=0.093  Score=32.87  Aligned_cols=35  Identities=17%  Similarity=0.245  Sum_probs=30.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++|.|.+..+|+-+...|+++   +..|++...
T Consensus       156 l~Gk~vvViGrS~iVG~Pla~lL~~~---~atVt~chs  190 (284)
T PRK14190        156 ISGKHVVVVGRSNIVGKPVGQLLLNE---NATVTYCHS  190 (284)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHC---CCEEEEEeC
Confidence            67899999999999999999999886   467777643

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=93.99  E-value=0.2  Score=31.23  Aligned_cols=34  Identities=26%  Similarity=0.346  Sum_probs=25.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|. |.|.+|+++.+.|.+.   ++.+.++.++..
T Consensus         4 ~~v~Iv-G~GliG~s~a~~l~~~---g~~v~i~g~d~~   37 (279)
T COG0287           4 MKVGIV-GLGLMGGSLARALKEA---GLVVRIIGRDRS   37 (279)
T ss_pred             cEEEEE-CCchHHHHHHHHHHHc---CCeEEEEeecCc
Confidence            345554 5999999999999997   567766666554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.99  E-value=0.24  Score=28.08  Aligned_cols=33  Identities=21%  Similarity=0.194  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|.+.|- |-.|+.+++.|++.   +++|++.+|++
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~---g~~v~~~d~~~   34 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKA---GYEVTVYDRSP   34 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHT---TTEEEEEESSH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhc---CCeEEeeccch
Confidence            46888865 99999999999987   68999999875

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.97  E-value=0.13  Score=31.07  Aligned_cols=36  Identities=19%  Similarity=0.296  Sum_probs=30.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|.+|..+++.+...   +.+|+.+++.+
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~---g~~v~~~~~~~  167 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALA---GAHVVAVVGSP  167 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4789999999999999999888876   56788887654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=93.96  E-value=0.3  Score=24.29  Aligned_cols=33  Identities=24%  Similarity=0.411  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ++|. |.|++|-.++..|.+.   +.+|+++.|.+.-
T Consensus         2 vvVi-GgG~ig~E~A~~l~~~---g~~vtli~~~~~~   34 (80)
T PF00070_consen    2 VVVI-GGGFIGIELAEALAEL---GKEVTLIERSDRL   34 (80)
T ss_dssp             EEEE-SSSHHHHHHHHHHHHT---TSEEEEEESSSSS
T ss_pred             EEEE-CcCHHHHHHHHHHHHh---CcEEEEEeccchh
Confidence            4444 7799999999999997   5799999997653

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=93.95  E-value=0.19  Score=30.71  Aligned_cols=36  Identities=28%  Similarity=0.340  Sum_probs=28.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|-+|..+++.....   +.+|++++.++
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~---G~~vi~~~~~~  181 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARL---GYEVVASTGRP  181 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEeCCH
Confidence            3568999999999999998877776   56777776543

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05295 MDH_like Malate dehydrogenase-like

Probab=93.92  E-value=0.3  Score=32.50  Aligned_cols=37  Identities=16%  Similarity=0.036  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhh---CCCc-ceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRS---FPDI-GAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~---~~~~-~~v~~~~r~   49 (67)
                      .-+|+||||+|.||.+++..+..-   +++- -.+++++.+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~  163 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSP  163 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCC
Confidence            357999999999999999998872   1111 245666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02928 oxidoreductase family protein

Probab=93.92  E-value=0.2  Score=32.00  Aligned_cols=36  Identities=17%  Similarity=0.118  Sum_probs=30.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.++++.|.|- |-||+.+++.+...   +.+|++.+|.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~af---G~~V~~~dr~  191 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPF---GVKLLATRRS  191 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhC---CCEEEEECCC
Confidence            367889999965 99999999999887   6799999886

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.91  E-value=0.11  Score=32.81  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++|.|.+..+|+-+...|+++   +..|++.-.
T Consensus       156 l~Gk~vvVIGrS~iVGkPla~lL~~~---~atVtv~hs  190 (297)
T PRK14186        156 IAGKKAVVVGRSILVGKPLALMLLAA---NATVTIAHS  190 (297)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHC---CCEEEEeCC
Confidence            67899999999999999999999886   467766643

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=93.91  E-value=0.14  Score=32.91  Aligned_cols=38  Identities=11%  Similarity=0.127  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      -.+++++|+|+. .+|..-++.+...   +.+|++++|+++.
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~---ga~Via~~~~~~K  202 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAM---GAEVIAITRSEEK  202 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHc---CCeEEEEeCChHH
Confidence            347899999888 7899888888777   5899999998763

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.90  E-value=0.16  Score=32.65  Aligned_cols=38  Identities=21%  Similarity=0.266  Sum_probs=30.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++|+|.|+ |.+|++++..|...+  ..++++++++
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d  168 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHD  168 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCC
Confidence            3467788999955 778999999999973  5689999886

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=93.89  E-value=0.12  Score=34.52  Aligned_cols=34  Identities=15%  Similarity=0.190  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |..|..++..++..   ++.|++.+++++
T Consensus         8 ~~V~VIGa-G~MG~gIA~~la~a---G~~V~l~D~~~e   41 (507)
T PRK08268          8 ATVAVIGA-GAMGAGIAQVAAQA---GHTVLLYDARAG   41 (507)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence            57999977 99999999999987   789999999865

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.89  E-value=0.19  Score=30.07  Aligned_cols=36  Identities=19%  Similarity=0.122  Sum_probs=28.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++.+++|.|++|.+|..+++.+...   +..|++++++
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~---g~~v~~~~~~  170 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKAL---GATVIGTVSS  170 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEcCC
Confidence            35678999999999999998877776   5677777654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	67
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	4e-13
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-04
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-04
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-04
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	5e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	6e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-04
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	8e-04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	9e-04

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 60.7 bits (147), Expect = 4e-13
 Identities = 16/50 (32%), Positives = 28/50 (56%)

Query: 16  ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS 65
           +L+TG TGF+G+ L+ +LLR     G +  +VR +       R++   +S
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDS 125

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 9  DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
          +   +  IL+TGGTG  GK  + K+L +  +   I +  RD+ 
Sbjct: 17 NMLDNQTILITGGTGSFGKCFVRKVLDTT-NAKKIIVYSRDEL 58

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 10/57 (17%)

Query: 16  ILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKGS-----SPEERVKNMLNSV 66
           + +TG  G +G+ L  +L       G  +  +VR +         P     ++L+  
Sbjct: 150 VAITGSRGLVGRALTAQLQTG----GHEVIQLVRKEPKPGKRFWDPLNPASDLLDGA 202

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
          I++TG TG +G  + ++ + +   I   +I VR+
Sbjct: 3  IMLTGATGHLGTHITNQAIAN--HIDHFHIGVRN 34

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
          +LVTG +G  G+++  KL            +VR 
Sbjct: 7  VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRS 39

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 5/36 (13%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFP--DIGAIYIMVRD 49
          I +TG TG +G  +I+ L+++ P   I A   +VR+
Sbjct: 2  IAITGATGQLGHYVIESLMKTVPASQIVA---IVRN 34

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 35.6 bits (82), Expect = 3e-04
 Identities = 6/33 (18%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR 48
          + + G +G  G++L+ ++L        + ++ R
Sbjct: 21 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGR 52

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPD 39
          ILVTG +G +G  L+  L   +  
Sbjct: 2  ILVTGSSGQIGTELVPYLAEKYGK 25

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 35.3 bits (81), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 16 ILVTGGTGFMGKLLIDKLLRS-FPDIGAIYIMVRDKKGSSPE 56
          +L+ GGTG++GK +++  +    P     Y++ R +  S+ +
Sbjct: 7  VLIVGGTGYIGKRIVNASISLGHP----TYVLFRPEVVSNID 44

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 34.9 bits (80), Expect = 5e-04
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK 60
          IL+ G TG++G+ +    L         +++VR+   SS  E+ +
Sbjct: 7  ILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQ 48

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 34.9 bits (80), Expect = 6e-04
 Identities = 5/20 (25%), Positives = 10/20 (50%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          I + G TG  G  ++++   
Sbjct: 3  IGIIGATGRAGSRILEEAKN 22

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 6/46 (13%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFP--DIGAIYIMVRD-KKGSSPEER 58
          I VTG TG +G L+I  LL+  P   I AI   VR+ +K S+  ++
Sbjct: 3  IAVTGATGQLGGLVIQHLLKKVPASQIIAI---VRNVEKASTLADQ 45

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDI 40
          +LVTG  G +G+++ ++L      +
Sbjct: 6  LLVTGAAGQLGRVMRERLAPMAEIL 30

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 5/20 (25%), Positives = 7/20 (35%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
            V G TG +G      +  
Sbjct: 16 YAVLGATGLLGHHAARAIRA 35

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 34.2 bits (78), Expect = 9e-04
 Identities = 7/20 (35%), Positives = 10/20 (50%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          I V G TG  G  ++ +  R
Sbjct: 3  IAVLGATGRAGSAIVAEARR 22

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.29
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.1
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.08
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.08
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.07
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.07
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.07
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.06
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.04
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.04
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.04
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.03
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.01
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.01
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.01
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.0
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.99
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.99
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	98.99
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.99
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	98.99
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	98.99
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.98
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.97
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	98.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	98.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	98.95
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	98.95
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	98.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.95
4f6c_A	427	AUSA reductase domain protein; thioester reductase	98.94
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	98.94
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	98.93
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.93
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	98.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.91
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	98.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	98.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.9
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	98.9
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.89
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	98.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	98.88
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.88
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.87
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	98.87
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	98.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.87
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.86
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.86
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.85
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.85
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.85
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.85
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.84
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	98.83
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	98.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	98.82
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.82
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.82
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.81
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.81
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.81
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.81
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	98.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	98.8
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.8
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	98.8
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.8
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.8
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	98.8
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.79
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.79
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.79
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.79
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.78
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.78
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.78
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.78
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.78
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.77
1xq6_A	253	Unknown protein; structural genomics, protein stru	98.77
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.77
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.77
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.77
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.76
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.76
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.76
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.76
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.76
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.75
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.75
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.75
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.75
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.75
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.75
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.75
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.75
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.75
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.75
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	98.75
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.74
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.74
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.74
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.74
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.74
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.74
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.74
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.74
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.73
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.73
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.73
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.73
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.73
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.73
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.73
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.72
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.72
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.72
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.72
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.72
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.72
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.72
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.72
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.72
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.72
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.72
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.72
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.71
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.71
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.71
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.71
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.71
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.7
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.7
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.7
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.7
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.7
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.7
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.7
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.7
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.7
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.7
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.69
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.69
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.69
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.69
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.69
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.69
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.69
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.69
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.68
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.68
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.68
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.68
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.68
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.67
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.67
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.67
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.67
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.67
1spx_A	278	Short-chain reductase family member (5L265); paral	98.67
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.67
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.67
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.67
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.67
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.67
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.66
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.66
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.66
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.66
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.66
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.66
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.66
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.66
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.65
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.65
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.65
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.65
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	98.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.65
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.65
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.65
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.65
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.65
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.65
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.64
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.64
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.64
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.64
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.64
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.64
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.64
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.63
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.63
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.63
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.63
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.62
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.62
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.62
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.62
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.62
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.62
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.61
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.61
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.61
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.61
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.61
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.61
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.61
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.61
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.61
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.6
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.6
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.6
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.6
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.6
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.6
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.6
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.6
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.6
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.6
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.6
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.6
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.59
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.59
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.58
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.58
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.58
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.58
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.57
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.57
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.57
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.57
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.56
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.56
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.56
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.56
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.56
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.55
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.55
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.55
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.55
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.54
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.54
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.53
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.51
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.5
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	98.5
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.5
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.49
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.49
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	98.49
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.48
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.47
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.46
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.46
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.45
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.45
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.45
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.44
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.44
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.43
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.42
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.4
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.39
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.39
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.38
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.38
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.36
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.35
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.35
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.34
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.32
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.27
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.26
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.26
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.24
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.23
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.22
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.2
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.19
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.13
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	97.99
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.92
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.91
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.91
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.89
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.88
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.85
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.84
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.82
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.81
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.79
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.79
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.78
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.74
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.71
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.71
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.7
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	97.64
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	97.6
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	97.59
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.56
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.54
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.53
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.5
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	97.49
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.45
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.45
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.44
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.42
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.4
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.37
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.35
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.34
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.32
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.31
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.31
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.31
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.3
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.29
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.27
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.27
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.26
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.26
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.23
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.2
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.11
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.1
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.1
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.08
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.08
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.06
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.05
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.04
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.04
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.02
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.01
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.01
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.0
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.99
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.98
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.96
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.94
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.9
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.9
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.89
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.89
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.88
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.86
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.86
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	96.8
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.8
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.78
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.78
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.78
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.75
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.74
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.73
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.73
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.72
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.71
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.71
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.71
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.68
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.67
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.66
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.63
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.62
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.62
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.62
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.58
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.58
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	96.57
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.57
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	96.54
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.53
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.53
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.52
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.51
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.5
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.5
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.5
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.46
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.46
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.45
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.45
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.44
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.43
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.36
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.35
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.34
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.32
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.31
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.3
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.28
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.28
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.27
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.27
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.26
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.26
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.25
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.24
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.23
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.23
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.23
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.21
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.21
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.2
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.18
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	96.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.13
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.12
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.11
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.1
4a5l_A	314	Thioredoxin reductase; oxidoreductase, redox metab	96.1
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.09
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.08
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.08
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.07
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.07
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.07
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.06
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.04
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.04
4gcm_A	312	TRXR, thioredoxin reductase; FAD/NAD-linked reduct	96.03
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.03
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.02
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.01
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.01
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.0
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.98
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.96
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.96
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.95
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.9
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.88
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.87
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.87
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.87
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.85
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.84
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.84
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.83
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.82
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	95.82
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	95.82
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	95.81
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.81
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.8
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.79
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.78
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.74
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	95.73
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.72
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.72
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.71
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.7
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	95.7
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.7
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.69
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.68
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.67
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.66
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.65
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.64
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.64
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.64
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.63
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.62
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	95.62
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	95.6
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	95.59

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.29  E-value=4.5e-12  Score=75.85  Aligned_cols=36  Identities=31%  Similarity=0.443  Sum_probs=32.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      |+|+|||||||||++++++|+++   +++|++++|++..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~---G~~V~~l~R~~~~   36 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNAR---GHEVTLVSRKPGP   36 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCCCc
Confidence            68999999999999999999998   7999999997653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.10  E-value=1.3e-10  Score=67.56  Aligned_cols=39  Identities=23%  Similarity=0.457  Sum_probs=33.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+|+||||+|+||++++++|+++   +++|++++|++.
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~---G~~V~~~~R~~~   56 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNK---GHEPVAMVRNEE   56 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhC---CCeEEEEECChH
Confidence            467899999999999999999999997   689999999865

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.08  E-value=2e-10  Score=69.21  Aligned_cols=42  Identities=21%  Similarity=0.294  Sum_probs=36.5

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++..+++++|+||||+||||++++++|+++   +++|++++|+..
T Consensus         5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   46 (342)
T 1y1p_A            5 NAVLPEGSLVLVTGANGFVASHVVEQLLEH---GYKVRGTARSAS   46 (342)
T ss_dssp             TCSSCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             cccCCCCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            445677899999999999999999999997   689999999643

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.08  E-value=2.2e-10  Score=70.08  Aligned_cols=39  Identities=23%  Similarity=0.416  Sum_probs=34.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHh--hCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLR--SFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~--~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+|+||||+||||+++++.|++  .   +++|++++|...
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~---g~~V~~~~r~~~   47 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHP---KAKVVVLDKFRS   47 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCT---TSEEEEEECCCC
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCC---CCeEEEEECCCc
Confidence            35688999999999999999999999  5   689999998654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.07  E-value=4.5e-10  Score=68.19  Aligned_cols=39  Identities=26%  Similarity=0.403  Sum_probs=35.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+|+||||+||||+++++.|+++   +++|++++|...
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   60 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKL---NQVVIGLDNFST   60 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCCC
Confidence            356789999999999999999999997   689999999765

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.07  E-value=4e-10  Score=68.12  Aligned_cols=37  Identities=38%  Similarity=0.529  Sum_probs=33.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +|+|+||||+||||+++++.|+++   +++|++++|+...
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~---G~~V~~~~r~~~~   45 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQK---GYAVNTTVRDPDN   45 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHT---TCEEEEEESCTTC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHC---CCEEEEEEcCcch
Confidence            678999999999999999999997   6899998887653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.07  E-value=3.4e-10  Score=67.26  Aligned_cols=49  Identities=18%  Similarity=0.208  Sum_probs=39.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      -++|+||||+||||+++++.|+++   +++|++++|+..+....+.+...++
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~Dl~d~~~~~~~~~   60 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGK---NVEVIPTDVQDLDITNVLAVNKFFN   60 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTS---SEEEEEECTTTCCTTCHHHHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHHhC---CCeEEeccCccCCCCCHHHHHHHHH
Confidence            478999999999999999999997   6899999998665555555555543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.06  E-value=3.5e-10  Score=68.89  Aligned_cols=41  Identities=24%  Similarity=0.265  Sum_probs=36.1

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ..+++|+|+||||+||||++++++|++.   +++|++++|++..
T Consensus         5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~   45 (357)
T 1rkx_A            5 SFWQGKRVFVTGHTGFKGGWLSLWLQTM---GATVKGYSLTAPT   45 (357)
T ss_dssp             HHHTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCSS
T ss_pred             hhhCCCEEEEECCCchHHHHHHHHHHhC---CCeEEEEeCCCcc
Confidence            4567899999999999999999999997   6899999997643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.06  E-value=2.8e-10  Score=68.95  Aligned_cols=41  Identities=27%  Similarity=0.318  Sum_probs=36.0

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+..+++|+|+||||+||||++++++|+++   +++|++++|..
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~---g~~V~~~~r~~   54 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQ---GHEILVIDNFA   54 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGG---TCEEEEEECCS
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCC
Confidence            345678899999999999999999999997   68999999954

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.04  E-value=2.7e-10  Score=68.09  Aligned_cols=38  Identities=29%  Similarity=0.432  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|+||||+||||++++++|++.   +++|++++|+..
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   42 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVAS---GEEVTVLDDLRV   42 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHT---TCCEEEECCCSS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHC---CCEEEEEecCCc
Confidence            34689999999999999999999997   689999999765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.04  E-value=2.7e-10  Score=69.07  Aligned_cols=39  Identities=21%  Similarity=0.170  Sum_probs=31.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++|+|+||||+||||+++++.|+++   +++|++++|.+.
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~---G~~V~~~~r~~~   54 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQ---GRTVRGFDLRPS   54 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHT---TCCEEEEESSCC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhC---CCEEEEEeCCCC
Confidence            356789999999999999999999997   689999999764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.04  E-value=3.4e-10  Score=68.22  Aligned_cols=38  Identities=26%  Similarity=0.223  Sum_probs=33.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ++|+|+||||+||||+++++.|+++   +++|++++|++..
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~---G~~V~~~~r~~~~   39 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEK---GYEVYGADRRSGE   39 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEECSCCST
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEECCCcc
Confidence            4689999999999999999999997   6899999997653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.04  E-value=3.8e-10  Score=71.79  Aligned_cols=50  Identities=30%  Similarity=0.527  Sum_probs=39.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHH
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVK   60 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~   60 (67)
                      .++|+|+||||+||||++++++|++..+.+++|++++|++.......++.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~  120 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLE  120 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHH
Confidence            45789999999999999999999997432479999999876433334443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.03  E-value=4.4e-10  Score=64.19  Aligned_cols=35  Identities=20%  Similarity=0.278  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|++.
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~   35 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNR---GHEVTAIVRNAG   35 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCSH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhC---CCEEEEEEcCch
Confidence            57999999999999999999997   689999999753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.01  E-value=4.3e-10  Score=66.68  Aligned_cols=48  Identities=21%  Similarity=0.339  Sum_probs=39.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|...+....+.+.+.++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~D~~d~~~~~~~~~   53 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPE---EYDIYPFDKKLLDITNISQVQQVVQ   53 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTT---TEEEEEECTTTSCTTCHHHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhC---CCEEEEecccccCCCCHHHHHHHHH
Confidence            38999999999999999999997   6899999997766555555555554

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.01  E-value=9e-10  Score=66.55  Aligned_cols=38  Identities=32%  Similarity=0.408  Sum_probs=33.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+|+|+||||+||||+++++.|+++   +++|++++|....
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~---G~~V~~~~r~~~~   41 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAH---GYDVVIADNLVNS   41 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHT---TCEEEEECCCSSS
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHC---CCcEEEEecCCcc
Confidence            4679999999999999999999997   6899999997654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.01  E-value=7.6e-10  Score=67.36  Aligned_cols=38  Identities=24%  Similarity=0.295  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+|+||||+||||+++++.|++.   +++|++++|...
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   62 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKL---DQKVVGLDNFAT   62 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCCc
Confidence            56789999999999999999999997   689999999754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.00  E-value=4.4e-10  Score=67.96  Aligned_cols=37  Identities=32%  Similarity=0.530  Sum_probs=32.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+||||+||||++++++|+++   +++|++++|+..
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~---G~~V~~~~r~~~   40 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLER---GYTVRATVRDPT   40 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHC---CCEEEEEECCcc
Confidence            5689999999999999999999997   689999998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.00  E-value=8.8e-10  Score=67.41  Aligned_cols=39  Identities=21%  Similarity=0.411  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+|+|+||||+||||+++++.|+++  .+++|++++|++.
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~   60 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILET--TDWEVFGMDMQTD   60 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHH--SSCEEEEEESCCT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhC--CCCEEEEEeCChh
Confidence            45689999999999999999999997  2579999999764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.00  E-value=1.2e-09  Score=63.32  Aligned_cols=39  Identities=18%  Similarity=0.390  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~~~   52 (67)
                      +++|+++||||+|+||++++++|+++   ++  +|++++|++..
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~---G~~~~V~~~~r~~~~   56 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQ---GLFSKVTLIGRRKLT   56 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHH---TCCSEEEEEESSCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcC---CCCCEEEEEEcCCCC
Confidence            56789999999999999999999998   67  99999998653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.99  E-value=4.3e-10  Score=64.73  Aligned_cols=36  Identities=25%  Similarity=0.448  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+|+||||+||||+++++.|+++   +++|++++|++.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   39 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNR---GFEVTAVVRHPE   39 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTT---TCEEEEECSCGG
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHC---CCEEEEEEcCcc
Confidence            368999999999999999999997   689999999754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.99  E-value=7.4e-10  Score=63.56  Aligned_cols=34  Identities=29%  Similarity=0.382  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|+++   +++|++++|++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~   34 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRR---GHEVLAVVRDP   34 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHC---CCEEEEEEecc
Confidence            57999999999999999999998   68999999974

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=98.99  E-value=8e-10  Score=66.99  Aligned_cols=40  Identities=15%  Similarity=0.109  Sum_probs=32.8

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++|+|+||||+||||++++++|+++   +++|++++|+..
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   56 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLER---GDKVVGIDNFAT   56 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHC---CCEEEEEECCCc
Confidence            3467789999999999999999999997   689999999643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.99  E-value=1e-09  Score=66.77  Aligned_cols=38  Identities=29%  Similarity=0.607  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +..++|+|||||||+|+++++.|++.   +++|++++|++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~---g~~V~~l~R~~~   45 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDA---HRPTYILARPGP   45 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHT---TCCEEEEECSSC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHC---CCCEEEEECCCC
Confidence            34578999999999999999999997   589999999863

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=98.99  E-value=5.2e-10  Score=64.35  Aligned_cols=35  Identities=31%  Similarity=0.422  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|++.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~---g~~V~~~~R~~~   35 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTT---DYQIYAGARKVE   35 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTS---SCEEEEEESSGG
T ss_pred             CeEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCcc
Confidence            57999999999999999999997   689999999754

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=98.99  E-value=6.3e-10  Score=66.68  Aligned_cols=35  Identities=40%  Similarity=0.723  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe-CC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR-DK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r-~~   50 (67)
                      +++|+||||+||||+++++.|+++   +++|++++| ++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~---G~~V~~~~r~~~   36 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLEN---GYSVNTTIRADP   36 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT---TCEEEEECCCC-
T ss_pred             CCEEEEECChhHHHHHHHHHHHHC---CCEEEEEEeCCc
Confidence            478999999999999999999997   689999888 54

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.98  E-value=2.1e-09  Score=64.48  Aligned_cols=34  Identities=32%  Similarity=0.572  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~   36 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKND---GNTPIILTRSI   36 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC---CCEEEEEeCCC
Confidence            68999999999999999999997   68999999983

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.97  E-value=9.8e-10  Score=66.24  Aligned_cols=38  Identities=29%  Similarity=0.195  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -.+++|+||||+||||+++++.|+++   +++|++++|++.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   49 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEK---GYRVHGLVARRS   49 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCCS
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCCc
Confidence            34689999999999999999999997   689999999765

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.97  E-value=1.2e-09  Score=65.88  Aligned_cols=37  Identities=16%  Similarity=0.235  Sum_probs=33.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..|+|+||||+||||++++++|+++   +++|++++|++.
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   48 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAA---GHDLVLIHRPSS   48 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECTTS
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEecChH
Confidence            3468999999999999999999997   689999999764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.97  E-value=9.5e-10  Score=65.75  Aligned_cols=35  Identities=34%  Similarity=0.527  Sum_probs=31.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||+++++.|+++   +++|++++|.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   35 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVEL---GYEVVVVDNLSS   35 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEECCCSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhC---CCEEEEEeCCCC
Confidence            57999999999999999999997   689999998654

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=98.97  E-value=1.1e-09  Score=66.38  Aligned_cols=39  Identities=31%  Similarity=0.410  Sum_probs=32.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++|+||||+||||++++++|++.   +++|++++|...
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   62 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMD---GHEVTVVDNFFT   62 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHC---CCEEEEEeCCCc
Confidence            356789999999999999999999997   689999998643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=98.97  E-value=1.1e-09  Score=61.94  Aligned_cols=36  Identities=22%  Similarity=0.325  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+|+||++++++|+++   +++|++++|++.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~---g~~V~~~~r~~~   38 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQA---GYEVTVLVRDSS   38 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCGG
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC---CCeEEEEEeChh
Confidence            378999999999999999999997   689999999753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=98.95  E-value=1.6e-09  Score=66.70  Aligned_cols=39  Identities=23%  Similarity=0.422  Sum_probs=34.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      .+++|+|+||||+||||++++++|+++   + ++|++++|...
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~   68 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLEL---GVNQVHVVDNLLS   68 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHT---TCSEEEEECCCTT
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHc---CCceEEEEECCCC
Confidence            356789999999999999999999997   6 89999999754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=98.95  E-value=1.3e-09  Score=65.30  Aligned_cols=38  Identities=26%  Similarity=0.415  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++|+||||+||||+++++.|+++   +++|++++|++.
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~---G~~V~~~~r~~~   47 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQ---NVEVFGTSRNNE   47 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCTT
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHC---CCEEEEEecCCc
Confidence            45679999999999999999999997   689999999754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=98.95  E-value=1.2e-09  Score=67.35  Aligned_cols=37  Identities=19%  Similarity=0.262  Sum_probs=30.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..++++|+||||+||||++++++|+++   +++|++++|.
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~---G~~V~~~~r~   44 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKK---NYEVCIVDNL   44 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhC---CCeEEEEEec
Confidence            456789999999999999999999997   6899999874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.95  E-value=1.3e-09  Score=65.88  Aligned_cols=38  Identities=16%  Similarity=0.357  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCc-------ceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDI-------GAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~-------~~v~~~~r~~~   51 (67)
                      +++|+|+||||+||||++++++|+++   +       ++|++++|...
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~---g~~~~r~~~~V~~~~r~~~   56 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKD---GSLGGKPVEKFTLIDVFQP   56 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHH---CEETTEEEEEEEEEESSCC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhc---CCcccCCCceEEEEEccCC
Confidence            57889999999999999999999998   5       68999998753

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.95  E-value=1.5e-09  Score=69.56  Aligned_cols=36  Identities=22%  Similarity=0.384  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||+++++.|++.   +++|++++|++.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~---G~~V~~l~R~~~  182 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTG---GHEVIQLVRKEP  182 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCCC
Confidence            689999999999999999999997   689999999865

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=98.94  E-value=9.5e-10  Score=68.69  Aligned_cols=37  Identities=38%  Similarity=0.626  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+||||+||||++++++|++.   +++|++++|++.
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~R~~~  104 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGY---SHRIYCFIRADN  104 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTT---EEEEEEEEECSS
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcC---CCEEEEEECCCC
Confidence            3568999999999999999999776   789999999876

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=98.94  E-value=1.9e-09  Score=64.06  Aligned_cols=33  Identities=27%  Similarity=0.334  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||+++++.|+ +   +++|++++|++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~---g~~V~~~~r~~   33 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-P---VGNLIALDVHS   33 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-T---TSEEEEECTTC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-c---CCeEEEecccc
Confidence            579999999999999999999 6   58999999976

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=98.93  E-value=1.2e-09  Score=65.46  Aligned_cols=36  Identities=19%  Similarity=0.275  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||++++++|+++   +++|++++|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   37 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQN---NWHAVGCGFRRA   37 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTT---TCEEEEEC----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhC---CCeEEEEccCCC
Confidence            478999999999999999999997   689999998643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.93  E-value=1.2e-09  Score=66.34  Aligned_cols=36  Identities=25%  Similarity=0.357  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc-----ceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-----GAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-----~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||++++++|+++   +     ++|++++|++.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~---g~~~~~~~V~~~~r~~~   41 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLA---DTPGGPWKVYGVARRTR   41 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTST---TCTTCSEEEEEEESSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC---CCCCCceEEEEEeCCCC
Confidence            468999999999999999999987   5     79999999754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.92  E-value=2.4e-09  Score=64.84  Aligned_cols=39  Identities=31%  Similarity=0.442  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|+|+||||+||||++++++|++++.. ..|++++|..
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-~~v~~~~~~~   60 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYET-YKIINFDALT   60 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTT-EEEEEEECCC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCC-cEEEEEeccc
Confidence            45789999999999999999999998321 5788888754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.91  E-value=1.7e-09  Score=64.10  Aligned_cols=36  Identities=19%  Similarity=0.329  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+|+||+++++.|++.   +++|++++|++.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~---G~~V~~~~r~~~   38 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPM---AEILRLADLSPL   38 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGG---EEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhc---CCEEEEEecCCc
Confidence            468999999999999999999997   789999999764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=98.91  E-value=2.2e-09  Score=65.79  Aligned_cols=44  Identities=32%  Similarity=0.576  Sum_probs=35.4

Q ss_pred             chhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          6 KVDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         6 ~~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+..++++|+|+||||+||||++++++|++.. +.++|++++|++
T Consensus        14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~-g~~~V~~~~r~~   57 (344)
T 2gn4_A           14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTT-NAKKIIVYSRDE   57 (344)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHHC-CCSEEEEEESCH
T ss_pred             cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhC-CCCEEEEEECCh
Confidence            34566888999999999999999999999971 123899999964

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=98.91  E-value=2.9e-09  Score=65.65  Aligned_cols=37  Identities=19%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|+||||+||||++++++|+++   +++|++++|++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   64 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHE---GHYVIASDWKKN   64 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHC---CCeEEEEECCCc
Confidence            4579999999999999999999997   689999999754

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.90  E-value=2.7e-09  Score=62.28  Aligned_cols=41  Identities=17%  Similarity=0.228  Sum_probs=36.2

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+..+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~---G~~V~~~~r~~   48 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAH---GASVVLLGRTE   48 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEecCH
Confidence            345578999999999999999999999997   68999999874

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.90  E-value=2.7e-09  Score=64.36  Aligned_cols=37  Identities=30%  Similarity=0.460  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+||||+||||++++++|+++++ +++|++++|..
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~-~~~V~~~~r~~   39 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHP-DWEVINIDKLG   39 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCT-TCEEEEEECCC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCC-CCEEEEEecCc
Confidence            57899999999999999999999721 27899999864

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=98.90  E-value=1.8e-09  Score=65.81  Aligned_cols=38  Identities=29%  Similarity=0.447  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      +++|+|+||||+||||++++++|++.   + ++|++++|...
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~   82 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDK---GITDILVVDNLKD   82 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHT---TCCCEEEEECCSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCcEEEEEecCCC
Confidence            45688999999999999999999997   5 78999998654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.89  E-value=3.2e-09  Score=65.08  Aligned_cols=33  Identities=33%  Similarity=0.548  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~   49 (67)
                      |+|+||||+||||++++++|+++   ++ +|++++|+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~---g~~~v~~~d~~   34 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTST---TDHHIFEVHRQ   34 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHH---CCCEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC---CCCEEEEECCC
Confidence            58999999999999999999998   56 89999985

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=98.88  E-value=3.7e-09  Score=65.04  Aligned_cols=36  Identities=25%  Similarity=0.458  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-hhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~-~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||++++++|+ +.   +++|++++|...
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~---g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDT---NHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC---CCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhC---CCEEEEEecCCc
Confidence            4689999999999999999999 76   689999998754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=98.88  E-value=4.8e-09  Score=62.90  Aligned_cols=49  Identities=10%  Similarity=0.255  Sum_probs=36.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC-CCChHHHHHHHhh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNMLN   64 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~-~~~~~~~~~~~~~   64 (67)
                      +|+|+||||+||||++++++|++.   +++|++++|+.. +....+.+..+++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~---g~~v~~~~r~~~~D~~d~~~~~~~~~   52 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQR---GDVELVLRTRDELNLLDSRAVHDFFA   52 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC---TTEEEECCCTTTCCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhC---CCeEEEEecCccCCccCHHHHHHHHH
Confidence            578999999999999999999997   678888887643 2233444544443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.88  E-value=1.2e-09  Score=69.74  Aligned_cols=37  Identities=38%  Similarity=0.627  Sum_probs=32.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .++|+||||+||||++++++|++.   +++|++++|++..
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~---g~~V~~l~R~~~~  186 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGY---SHRIYCFIRADNE  186 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTT---EEEEEEEEESSSH
T ss_pred             CCeEEEECCccchHHHHHHHHHhc---CCEEEEEECCCCh
Confidence            478999999999999999999765   7899999998763

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.87  E-value=3.7e-09  Score=61.43  Aligned_cols=37  Identities=22%  Similarity=0.256  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|++
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~---G~~V~~~~r~~   41 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHAS---GAKVVAVTRTN   41 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.87  E-value=8.2e-09  Score=60.23  Aligned_cols=36  Identities=17%  Similarity=0.226  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~---G~~V~~~~r~   40 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARA---GAKVGLHGRK   40 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEECCC
Confidence            57889999999999999999999997   6899999998

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=98.87  E-value=3.6e-09  Score=64.05  Aligned_cols=36  Identities=25%  Similarity=0.383  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||++++++|++.   +++|++++|...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   37 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEA---GYLPVVIDNFHN   37 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHT---TCCEEEEECSSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEecCCc
Confidence            368999999999999999999997   689999998643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=98.87  E-value=3.9e-09  Score=63.48  Aligned_cols=35  Identities=23%  Similarity=0.469  Sum_probs=31.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||++++++|+++   +++|++++|...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   36 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDE---GLSVVVVDNLQT   36 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhC---CCEEEEEeCCCc
Confidence            58999999999999999999997   689999998643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.87  E-value=4.9e-09  Score=62.56  Aligned_cols=36  Identities=25%  Similarity=0.380  Sum_probs=32.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      .|+|+||||+|++|+++++.|+++   + ++|++++|++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~---g~~~V~~~~R~~~   41 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLED---GTFKVRVVTRNPR   41 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH---CSSEEEEEESCTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhc---CCceEEEEEcCCC
Confidence            478999999999999999999997   5 79999999865

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.87  E-value=2.8e-09  Score=63.61  Aligned_cols=35  Identities=26%  Similarity=0.525  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+||||+|++|+++++.|+++   +++|++++|++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~   36 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKA---GNPTYALVRKT   36 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHH---TCCEEEEECCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhC---CCcEEEEECCC
Confidence            468999999999999999999998   58999999986

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.86  E-value=3.7e-09  Score=69.59  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=33.0

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...+++|+|+||||+||||++++++|+++   +++|++++|...
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~---G~~V~~~~r~~~   46 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIEN---GYDCVVADNLSN   46 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCCc
Confidence            34467889999999999999999999997   689999998754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.86  E-value=3.1e-09  Score=64.79  Aligned_cols=35  Identities=29%  Similarity=0.227  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||++++++|+++   +++|++++|++.
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   36 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEK---GYEVHGIKRRAS   36 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEECC---
T ss_pred             CEEEEECCCChHHHHHHHHHHHC---CCEEEEEECCCc
Confidence            68999999999999999999997   689999998754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.86  E-value=4.3e-09  Score=64.60  Aligned_cols=35  Identities=29%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||+||||+++++.|++.   +++|++++|+..
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~---g~~V~~~~r~~~   63 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGK---GYEVHGLIRRSS   63 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHC---CCEEEEEecCCc
Confidence            48999999999999999999997   689999999754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.86  E-value=5e-09  Score=60.88  Aligned_cols=35  Identities=23%  Similarity=0.257  Sum_probs=31.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~---g~~V~~~~r~~~   36 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARA---GHTVIGIDRGQA   36 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEeCChh
Confidence            47999999999999999999997   689999999764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.85  E-value=5.2e-09  Score=61.76  Aligned_cols=37  Identities=22%  Similarity=0.254  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   46 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKA---GATVAIADLDV   46 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.85  E-value=4.2e-09  Score=63.54  Aligned_cols=33  Identities=27%  Similarity=0.418  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+|+||||+||||+++++.|++.   +++|++++|.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~r~   34 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQ---GIDLIVFDNL   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhC---CCEEEEEeCC
Confidence            57999999999999999999997   6899999985

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.85  E-value=7.7e-09  Score=60.42  Aligned_cols=38  Identities=16%  Similarity=0.145  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   42 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRAR---NWWVASIDVVEN   42 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC---CCEEEEEeCChh
Confidence            56789999999999999999999997   689999999754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.85  E-value=1.2e-08  Score=59.87  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|+..
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~---G~~V~~~~r~~~   49 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAA---GANVAVIYRSAA   49 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHT---TEEEEEEESSCT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCcch
Confidence            56789999999999999999999997   689999999654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.84  E-value=6e-09  Score=60.80  Aligned_cols=37  Identities=11%  Similarity=0.110  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~   45 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATA---GASVVVSDINA   45 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            67899999999999999999999997   68999999864

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.84  E-value=4.1e-09  Score=60.02  Aligned_cols=37  Identities=24%  Similarity=0.470  Sum_probs=32.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~~~   52 (67)
                      +|+|+||||+|+||++++++|+++   ++  +|++++|++..
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~---g~~~~V~~~~r~~~~   43 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSE---PTLAKVIAPARKALA   43 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHC---TTCCEEECCBSSCCC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhC---CCCCeEEEEeCCCcc
Confidence            578999999999999999999997   45  99999997653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=98.83  E-value=4.9e-09  Score=62.78  Aligned_cols=33  Identities=30%  Similarity=0.539  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+|+||||+||||++++++|+++   +++|++++|.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~---G~~V~~~~r~   33 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLAR---GLEVAVLDNL   33 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT---TCEEEEECCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC---CCEEEEEECC
Confidence            47999999999999999999997   6899999884

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=98.83  E-value=6e-09  Score=62.82  Aligned_cols=36  Identities=31%  Similarity=0.529  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||++++++|+++  .+++|++++|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r~~~   36 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSD   36 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHS--TTCEEEEEESCCG
T ss_pred             CeEEEECCCcHHHHHHHHHHHHh--CCCEEEEEeCCcc
Confidence            57999999999999999999986  2479999999653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.82  E-value=6.9e-09  Score=63.57  Aligned_cols=35  Identities=31%  Similarity=0.283  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||+||||+++++.|+++   +++|++++|++.
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEK---GYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCcc
Confidence            58999999999999999999997   689999999754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.82  E-value=9.4e-09  Score=59.83  Aligned_cols=37  Identities=16%  Similarity=0.370  Sum_probs=33.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~---G~~V~~~~r~~~   38 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKN---GYTVLNIDLSAN   38 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHT---TEEEEEEESSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEecCcc
Confidence            4678999999999999999999997   689999999764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.82  E-value=4.8e-09  Score=62.71  Aligned_cols=36  Identities=25%  Similarity=0.624  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+||||+|++|+++++.|+++   +++|++++|+..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~   39 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISL---GHPTYVLFRPEV   39 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT---TCCEEEECCSCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC---CCcEEEEECCCc
Confidence            468999999999999999999997   589999999864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.81  E-value=4.7e-09  Score=61.09  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      .|+|+||||+|+||+++++.|++.   + ++|++++|+++
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~---G~~~V~~~~R~~~   59 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADK---QTIKQTLFARQPA   59 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC---TTEEEEEEESSGG
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhC---CCceEEEEEcChh
Confidence            468999999999999999999997   6 79999999754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.81  E-value=4.9e-09  Score=62.53  Aligned_cols=36  Identities=25%  Similarity=0.539  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+||||+|++|+++++.|+++   +++|++++|+..
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~l~R~~~   39 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDL---GHPTFLLVREST   39 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT---TCCEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhC---CCCEEEEECCcc
Confidence            468999999999999999999997   589999999864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.81  E-value=7e-09  Score=60.86  Aligned_cols=37  Identities=22%  Similarity=0.226  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~---G~~V~~~~r~~   41 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGE---GATVAACDLDR   41 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            56789999999999999999999997   68999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.81  E-value=7.4e-09  Score=61.21  Aligned_cols=38  Identities=18%  Similarity=0.225  Sum_probs=34.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLK---GAKVALVDWNL   41 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHC---CCEEEEEECCH
Confidence            367889999999999999999999997   68999999864

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.81  E-value=1e-08  Score=59.84  Aligned_cols=37  Identities=16%  Similarity=0.160  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~---G~~V~~~~r~~   45 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAAS---GARLILIDREA   45 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57889999999999999999999997   68999999874

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=98.81  E-value=7.9e-09  Score=61.32  Aligned_cols=36  Identities=22%  Similarity=0.260  Sum_probs=31.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|+||| +||||+++++.|+++   +++|++++|+++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~---g~~V~~~~r~~~   37 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQ---GHEVTGLRRSAQ   37 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHT---TCCEEEEECTTS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            357899999 599999999999997   689999999754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=98.80  E-value=1.1e-08  Score=61.78  Aligned_cols=34  Identities=29%  Similarity=0.441  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|+++   +++|++++|..
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~---G~~V~~~~~~~   34 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQN---GHDVIILDNLC   34 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---CCEEEEEecCC
Confidence            47999999999999999999997   68999998743

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.80  E-value=4.7e-09  Score=62.31  Aligned_cols=36  Identities=28%  Similarity=0.488  Sum_probs=31.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||+++++.|++.  .+++|++++|++.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~--~g~~V~~~~R~~~   36 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIAN--HIDHFHIGVRNVE   36 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHT--TCTTEEEEESSGG
T ss_pred             CEEEEEcCCchHHHHHHHHHhhC--CCCcEEEEECCHH
Confidence            57999999999999999998875  2579999999754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=98.80  E-value=1.2e-08  Score=59.96  Aligned_cols=43  Identities=21%  Similarity=0.213  Sum_probs=34.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+++++++||||+|+||++++++|++.+..+++|++++|+...
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~   60 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ   60 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTS
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhh
Confidence            4678899999999999999999999972111799999998654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.80  E-value=5.9e-09  Score=62.66  Aligned_cols=35  Identities=29%  Similarity=0.562  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .|+|+||||+|++|+++++.|+++   +++|++++|++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~   38 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSF---SHPTFIYARPL   38 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHT---TCCEEEEECCC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhC---CCcEEEEECCc
Confidence            468999999999999999999997   68999999986

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.80  E-value=9.7e-09  Score=60.45  Aligned_cols=40  Identities=23%  Similarity=0.271  Sum_probs=34.6

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +..+++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~   53 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQE---GAEVTICARNE   53 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            34578899999999999999999999997   68999999874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.80  E-value=2.4e-08  Score=58.56  Aligned_cols=38  Identities=13%  Similarity=0.192  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~---G~~V~~~~r~~~   47 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQ---GASAVLLDLPNS   47 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECTTS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCcH
Confidence            57889999999999999999999997   689999999764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=98.80  E-value=7e-09  Score=61.87  Aligned_cols=38  Identities=24%  Similarity=0.341  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+|+||||+||||++++++|+++. .+++|++++|++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r~~~   39 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLY-GTENVIASDIRKL   39 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEESCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEcCCCc
Confidence            3689999999999999999999861 2478999999754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.79  E-value=1.3e-08  Score=60.00  Aligned_cols=38  Identities=18%  Similarity=0.306  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   41 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFARE---GALVALCDLRPE   41 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            46789999999999999999999997   689999999765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.79  E-value=1.3e-08  Score=58.88  Aligned_cols=36  Identities=19%  Similarity=0.214  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||++++++|+++   +++|++++|++.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~~   37 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKAR---GYRVVVLDLRRE   37 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEESSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEccCcc
Confidence            578999999999999999999998   689999998754

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.79  E-value=8.7e-09  Score=63.40  Aligned_cols=37  Identities=27%  Similarity=0.214  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..|+|+||||+||||+++++.|+++   +++|++++|+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~   40 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAV---GHHVRAQVHSLK   40 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT---TCCEEEEESCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEECCCC
Confidence            3578999999999999999999997   689999999765

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.79  E-value=2.2e-08  Score=56.80  Aligned_cols=33  Identities=21%  Similarity=0.368  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|+||++++++|+ +   +++|++++|++
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~---g~~V~~~~r~~   36 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-K---KAEVITAGRHS   36 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-T---TSEEEEEESSS
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-C---CCeEEEEecCc
Confidence            489999999999999999999 7   68999999975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.78  E-value=1.1e-08  Score=60.47  Aligned_cols=38  Identities=18%  Similarity=0.278  Sum_probs=34.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   47 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAE---GAKLSLVDVSS   47 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            367899999999999999999999997   68999999874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.78  E-value=1.2e-08  Score=59.70  Aligned_cols=37  Identities=22%  Similarity=0.274  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~---G~~V~~~~r~~   47 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEA---GARVIIADLDE   47 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57889999999999999999999997   68999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.78  E-value=1.7e-08  Score=58.04  Aligned_cols=35  Identities=26%  Similarity=0.275  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-hhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~-~~~~~~~~v~~~~r~~~   51 (67)
                      ++++||||+|+||+++++.|+ +.   +++|++++|++.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~---g~~V~~~~r~~~   41 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYT---DMHITLYGRQLK   41 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHC---CCEEEEEESSHH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcC---CceEEEEecCcc
Confidence            469999999999999999999 65   689999999754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.78  E-value=1.4e-08  Score=59.69  Aligned_cols=37  Identities=19%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVE---GADIAIADLVP   41 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCCc
Confidence            56889999999999999999999997   68999999976

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.78  E-value=3e-08  Score=58.94  Aligned_cols=40  Identities=15%  Similarity=0.120  Sum_probs=35.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   46 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARA---GARVVLADLPET   46 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECTTS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            3467899999999999999999999997   689999999765

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.78  E-value=1.4e-08  Score=59.10  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~---G~~V~~~~r~~   41 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHAT---GARVVAVSRTQ   41 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.77  E-value=1.8e-08  Score=59.76  Aligned_cols=38  Identities=16%  Similarity=0.300  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   43 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDE---GSKVIDLSIHDP   43 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEecCcc
Confidence            56889999999999999999999997   689999998753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=98.77  E-value=1.6e-08  Score=58.53  Aligned_cols=38  Identities=29%  Similarity=0.315  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++|+||||+|+||++++++|+++. .+++|++++|++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r~~   40 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVRSA   40 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEESCH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEcCC
Confidence            46799999999999999999999972 247999999964

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.77  E-value=9.5e-09  Score=60.83  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|||| ||||++++++|+++   +++|++++|++.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~---g~~V~~~~r~~~   39 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQ---GWRIIGTSRNPD   39 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGG---TCEEEEEESCGG
T ss_pred             CcEEEECC-cHHHHHHHHHHHHC---CCEEEEEEcChh
Confidence            68999998 99999999999998   689999999764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.77  E-value=8.5e-09  Score=61.97  Aligned_cols=35  Identities=29%  Similarity=0.621  Sum_probs=32.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||+|++|+++++.|+++   +++|++++|++.
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~---g~~V~~l~R~~~   46 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKL---GHPTYVFTRPNS   46 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHT---TCCEEEEECTTC
T ss_pred             CeEEEECCCchHHHHHHHHHHHC---CCcEEEEECCCC
Confidence            47999999999999999999997   689999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.77  E-value=1.8e-08  Score=59.93  Aligned_cols=38  Identities=26%  Similarity=0.287  Sum_probs=34.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~---G~~V~~~~r~~   66 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQ---GLKVVGCARTV   66 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEECCh
Confidence            367899999999999999999999997   68999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.76  E-value=1.6e-08  Score=59.40  Aligned_cols=38  Identities=21%  Similarity=0.207  Sum_probs=34.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   41 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAE---GAAVAIAARRV   41 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            367889999999999999999999997   68999999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.76  E-value=1.8e-08  Score=59.30  Aligned_cols=38  Identities=13%  Similarity=0.162  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+..
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   42 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQE---GATVLGLDLKPP   42 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            57899999999999999999999998   689999999765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.76  E-value=1.3e-08  Score=60.59  Aligned_cols=41  Identities=27%  Similarity=0.387  Sum_probs=35.4

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +..+++|+++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   49 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRY---GAKVVSVSLDEK   49 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCC-
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            45578999999999999999999999997   689999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.76  E-value=1.6e-08  Score=61.45  Aligned_cols=35  Identities=23%  Similarity=0.551  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||+++++.|++.  .+++|++++|..
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~--~g~~V~~~~r~~   35 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLT   35 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCC
T ss_pred             CEEEEECCCchHhHHHHHHHHhc--CCCeEEEEecCC
Confidence            47999999999999999999996  247999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.76  E-value=1.3e-08  Score=59.21  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~---G~~V~~~~r~~   41 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASA---GSTVIITGTSG   41 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            56789999999999999999999997   68999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.75  E-value=1.8e-08  Score=59.33  Aligned_cols=41  Identities=24%  Similarity=0.354  Sum_probs=36.1

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...+++++++||||+|+||+++++.|++.   +.+|++++|+.+
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   47 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARY---GATVILLGRNEE   47 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            34578999999999999999999999997   689999998743

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.75  E-value=1.7e-08  Score=60.43  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=34.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~---G~~V~~~~r~~   52 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLEL---GSNVVIASRKL   52 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            467899999999999999999999997   68999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.75  E-value=1.5e-08  Score=60.37  Aligned_cols=37  Identities=11%  Similarity=0.223  Sum_probs=32.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++++||||+|+||+++++.|+++   +++|++++|+
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~   49 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEE---GHPLLLLARR   49 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHT---TCCEEEEESC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECC
Confidence            356789999999999999999999998   6899999986

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.75  E-value=1.8e-08  Score=60.30  Aligned_cols=38  Identities=21%  Similarity=0.190  Sum_probs=34.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~---G~~V~~~~r~~   60 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSL---GAQCVIASRKM   60 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            367889999999999999999999997   68999999874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.75  E-value=2.1e-08  Score=59.48  Aligned_cols=38  Identities=16%  Similarity=0.158  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   63 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDR---NYRVVATSRSIK   63 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            56789999999999999999999998   689999999754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.75  E-value=1.7e-08  Score=59.51  Aligned_cols=37  Identities=19%  Similarity=0.260  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   42 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVRE---GATVAIADIDI   42 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57889999999999999999999998   68999999864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.75  E-value=1.6e-08  Score=59.81  Aligned_cols=37  Identities=16%  Similarity=0.114  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAE---GAKVVFGDILD   41 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.75  E-value=2e-08  Score=59.00  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   50 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAAD---GHKVAVTHRGSG   50 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            367889999999999999999999997   689999999754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.75  E-value=1.5e-08  Score=66.53  Aligned_cols=40  Identities=30%  Similarity=0.499  Sum_probs=33.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+|+||||+||||++++++|+++  .+++|++++|+..
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~--~g~~V~~~~r~~~  351 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSD  351 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHS--SSEEEEEEESCCT
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhc--CCCEEEEEEcCch
Confidence            356789999999999999999999986  2479999999754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.75  E-value=1.9e-08  Score=60.07  Aligned_cols=39  Identities=18%  Similarity=0.356  Sum_probs=34.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~---G~~V~~~~r~~   62 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKM---GAHVVVTARSK   62 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            3467899999999999999999999997   68999999874

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.75  E-value=1.2e-08  Score=60.73  Aligned_cols=34  Identities=32%  Similarity=0.511  Sum_probs=30.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      +|+||||+||||++++++|+++   + ++|++++|.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~---g~~~V~~~~r~~~   35 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDK---GITDILVVDNLKD   35 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTT---TCCCEEEEECCSS
T ss_pred             CEEEEcCccHHHHHHHHHHHHC---CCcEEEEEccCCC
Confidence            4899999999999999999997   5 78999998754

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=98.75  E-value=4.1e-09  Score=62.10  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=31.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+||||+||||++++++|++.   +++|++++|++.
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~   37 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTL---AHEVRLSDIVDL   37 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGT---EEEEEECCSSCC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhC---CCEEEEEeCCCc
Confidence            47999999999999999999997   689999999764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.74  E-value=2.3e-08  Score=58.76  Aligned_cols=38  Identities=11%  Similarity=0.057  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r~~~   42 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEA---GAKVTGFDQAFT   42 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCchh
Confidence            56789999999999999999999997   689999998753

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.74  E-value=1.2e-08  Score=59.11  Aligned_cols=37  Identities=27%  Similarity=0.417  Sum_probs=33.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCc--ceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDI--GAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~--~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||+++++.|+++   +  ++|++++|+..
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~---g~~~~V~~~~r~~~   40 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKD---KNIRHIIATARDVE   40 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTC---TTCCEEEEEESSGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhc---CCCcEEEEEecCHH
Confidence            4679999999999999999999997   6  79999999754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.74  E-value=2.6e-08  Score=58.58  Aligned_cols=37  Identities=19%  Similarity=0.223  Sum_probs=33.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++++||||+|+||+++++.|+++   +++|++++|+...
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~---G~~V~~~~r~~~~   58 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSK---SWNTISIDFRENP   58 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCccc
Confidence            578999999999999999999997   6899999998653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.74  E-value=2.3e-08  Score=59.71  Aligned_cols=39  Identities=18%  Similarity=0.192  Sum_probs=35.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|++..
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~~   69 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGA---GAHVILHGVKPGS   69 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCHHH
Confidence            67899999999999999999999998   6899999997653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.74  E-value=2.9e-08  Score=59.67  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   82 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKE---GANIAIAYLDEE   82 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            57889999999999999999999997   689999998753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.74  E-value=3e-08  Score=58.49  Aligned_cols=38  Identities=16%  Similarity=0.282  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+.+
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   42 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAE---GFTVFAGRRNGE   42 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999998   689999999755

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.74  E-value=1.2e-08  Score=60.68  Aligned_cols=38  Identities=16%  Similarity=0.182  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||++++++|+++   +++|++++|+..
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~~   40 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAA---GDTVIGTARRTE   40 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            35789999999999999999999997   689999999754

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.74  E-value=1.5e-08  Score=59.47  Aligned_cols=35  Identities=14%  Similarity=0.262  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||+|+||++++++|++.   +++|++++|
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~---G~~V~~~~r   39 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATE---KAKVVVNYR   39 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEcC
Confidence            57889999999999999999999997   689999998

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.74  E-value=1.6e-08  Score=59.21  Aligned_cols=36  Identities=31%  Similarity=0.386  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHh-hCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~-~~~~~~~v~~~~r~~   50 (67)
                      ++++++||||+|+||+++++.|++ .   +++|++++|+.
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~---g~~V~~~~r~~   39 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLF---SGDVVLTARDV   39 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS---SSEEEEEESSH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhc---CCeEEEEeCCh
Confidence            578999999999999999999999 6   67999999864

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.73  E-value=1.7e-08  Score=59.40  Aligned_cols=38  Identities=24%  Similarity=0.183  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r~~~   39 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARA---GANIVLNGFGDP   39 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            46789999999999999999999997   689999988754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.73  E-value=2.2e-08  Score=59.05  Aligned_cols=37  Identities=14%  Similarity=0.240  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKE---GAHIVLVARQV   41 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            56789999999999999999999997   68999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.73  E-value=2.2e-08  Score=59.02  Aligned_cols=37  Identities=24%  Similarity=0.388  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r~~   43 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASL---GASVYTCSRNQ   43 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.73  E-value=1.6e-08  Score=58.91  Aligned_cols=37  Identities=22%  Similarity=0.273  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~---G~~V~~~~r~~   40 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEE---GAKVMITGRHS   40 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.73  E-value=3.3e-08  Score=58.47  Aligned_cols=39  Identities=21%  Similarity=0.223  Sum_probs=33.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   56 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADA---GDKVAITYRSGE   56 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            356789999999999999999999997   689999999754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.73  E-value=5.7e-08  Score=57.86  Aligned_cols=37  Identities=14%  Similarity=-0.006  Sum_probs=33.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~---G~~V~~~~r~   48 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAE---GADIIACDIC   48 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEecc
Confidence            467899999999999999999999998   6899999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.73  E-value=2.3e-08  Score=59.03  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=33.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~---G~~V~~~~r~~   50 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRY---GAKVVIADIAD   50 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCh
Confidence            357889999999999999999999997   68999998864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.73  E-value=2.3e-08  Score=59.37  Aligned_cols=38  Identities=13%  Similarity=0.005  Sum_probs=34.5

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++++||||+|+||+++++.|+++   +++|++++|+
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~   46 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAAD---GADIIAVDLC   46 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEecc
Confidence            3477899999999999999999999997   6899999986

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.72  E-value=2.4e-08  Score=59.81  Aligned_cols=37  Identities=22%  Similarity=0.436  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~---G~~V~~~~r~~   50 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARR---GATVIMAVRDT   50 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEECCH
Confidence            57899999999999999999999997   68999999874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.72  E-value=9.3e-09  Score=60.81  Aligned_cols=37  Identities=38%  Similarity=0.553  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+||||+||||+++++.|+++. .+++|++++|++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r~~~   37 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVRNVE   37 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEESCTT
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEcCHH
Confidence            479999999999999999999851 2579999999754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.72  E-value=2e-08  Score=59.30  Aligned_cols=39  Identities=13%  Similarity=0.262  Sum_probs=34.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   47 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKA---GASVVVTDLKSE   47 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHH---TCEEEEEESSHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            467899999999999999999999998   689999998643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.72  E-value=1.9e-08  Score=59.68  Aligned_cols=38  Identities=16%  Similarity=0.191  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+..
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~~   69 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQA---GADVAIWYNSHP   69 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHH---TCEEEEEESSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57889999999999999999999998   689999999765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.72  E-value=1.9e-08  Score=59.21  Aligned_cols=38  Identities=18%  Similarity=0.205  Sum_probs=34.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   48 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQD---GAHVVVSSRKQ   48 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            367899999999999999999999997   68999999874

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.72  E-value=2.4e-08  Score=60.40  Aligned_cols=36  Identities=22%  Similarity=0.433  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|+++. .+++|++++|..
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r~~   40 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDKLT   40 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeCCC
Confidence            689999999999999999999972 247999999864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.72  E-value=2.4e-08  Score=59.52  Aligned_cols=39  Identities=28%  Similarity=0.402  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   46 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAA---GASVMIVGRNPD   46 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            467899999999999999999999997   689999998643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.72  E-value=2.4e-08  Score=59.29  Aligned_cols=37  Identities=19%  Similarity=0.307  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +.+|++++|+.
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~---G~~V~~~~r~~   63 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASM---GLKVWINYRSN   63 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            56889999999999999999999997   68999999854

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.72  E-value=2.5e-08  Score=59.19  Aligned_cols=37  Identities=16%  Similarity=0.211  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~   65 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKL---KSKLVLWDINK   65 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEEcCH
Confidence            66789999999999999999999997   68999999864

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.72  E-value=1.6e-08  Score=59.30  Aligned_cols=33  Identities=21%  Similarity=0.245  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+||||++++++|++    +++|++++|++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~----g~~V~~~~r~~   33 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE----RHEVIKVYNSS   33 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT----TSCEEEEESSS
T ss_pred             CEEEEECCCChhHHHHHHHHhc----CCeEEEecCCC
Confidence            4799999999999999999994    37899999975

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.72  E-value=2.2e-08  Score=60.95  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+..
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~---G~~Vv~~~r~~~   43 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQ---GCKVAIADIRQD   43 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999997   689999999754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.72  E-value=1.7e-08  Score=59.92  Aligned_cols=38  Identities=24%  Similarity=0.276  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+..
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   62 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEH---GHRVIISYRTEH   62 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHT---TCCEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            56789999999999999999999997   689999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.72  E-value=2.5e-08  Score=58.90  Aligned_cols=37  Identities=24%  Similarity=0.285  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEE---GTAIALLDMNR   41 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57889999999999999999999997   68999999864

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.71  E-value=2.5e-08  Score=59.28  Aligned_cols=38  Identities=24%  Similarity=0.230  Sum_probs=34.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   55 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNL   55 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            467899999999999999999999997   68999999874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.71  E-value=1.7e-08  Score=58.98  Aligned_cols=39  Identities=15%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~   48 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKL---GSKVIISGSNE   48 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            3467899999999999999999999997   68999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.71  E-value=2e-08  Score=59.13  Aligned_cols=37  Identities=24%  Similarity=0.394  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~---G~~V~~~~r~~   48 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGF---GAVIHTCARNE   48 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.71  E-value=1.9e-08  Score=59.60  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=31.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~---G~~V~~~~r   43 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQ---GFRVVVHYR   43 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeC
Confidence            357889999999999999999999997   689999998

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.71  E-value=4.1e-08  Score=58.69  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.+
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   67 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEA---GAQVAVAARHSD   67 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            67899999999999999999999997   689999999754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.71  E-value=2.4e-08  Score=59.63  Aligned_cols=40  Identities=25%  Similarity=0.229  Sum_probs=31.6

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.++++++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~   58 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAAR---GIAVYGCARDA   58 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            34567889999999999999999999997   68999999864

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.70  E-value=3e-08  Score=58.44  Aligned_cols=37  Identities=19%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   41 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARN---GARLLLFSRNR   41 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.70  E-value=2e-08  Score=59.24  Aligned_cols=38  Identities=18%  Similarity=0.101  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   39 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQ---GADIVLNGFGDA   39 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEECCSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHc---CCEEEEEeCCcc
Confidence            46789999999999999999999997   689999998754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.70  E-value=3.4e-08  Score=59.59  Aligned_cols=36  Identities=31%  Similarity=0.647  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhh-CCCc---ceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRS-FPDI---GAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~-~~~~---~~v~~~~r~~   50 (67)
                      |+|+||||+||||++++++|+++ .+ +   ++|++++|..
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~-g~~~~~V~~~~r~~   40 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYP-DVPADEVIVLDSLT   40 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCT-TSCCSEEEEEECCC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcC-CCCceEEEEEECCC
Confidence            57999999999999999999984 21 4   7899999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.70  E-value=3.2e-08  Score=59.76  Aligned_cols=38  Identities=24%  Similarity=0.368  Sum_probs=34.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++++|+..
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   76 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARA---GANVAVAARSPR   76 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999998   689999999754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.70  E-value=3.1e-08  Score=58.08  Aligned_cols=38  Identities=13%  Similarity=0.158  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++ |++++|+..
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~---G~~~v~~~~r~~~   41 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKR---NLKNFVILDRVEN   41 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---CCSEEEEEESSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC---CCcEEEEEecCch
Confidence            56789999999999999999999997   565 888888753

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.70  E-value=2.1e-08  Score=58.97  Aligned_cols=36  Identities=17%  Similarity=0.111  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|.
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~---G~~v~~~~r~   54 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRR---GASVVVNYGS   54 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCC
Confidence            56789999999999999999999997   6899999883

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.70  E-value=2.4e-08  Score=59.56  Aligned_cols=39  Identities=21%  Similarity=0.199  Sum_probs=33.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~---G~~V~~~~r~~~   47 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSN---GIMVVLTCRDVT   47 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            467899999999999999999999997   689999999753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.70  E-value=2.3e-08  Score=59.03  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=34.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   40 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKE---GARVVITGRTK   40 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            467899999999999999999999997   68999999874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.70  E-value=3.3e-08  Score=57.87  Aligned_cols=38  Identities=21%  Similarity=0.315  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.+
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~---G~~V~~~~r~~~   44 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALARE---GAAVVVADINAE   44 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            57899999999999999999999998   689999998643

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.70  E-value=2.6e-08  Score=58.33  Aligned_cols=37  Identities=11%  Similarity=0.066  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   40 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFARE---GAKVIATDINE   40 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            56789999999999999999999997   68999999864

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.69  E-value=3.5e-08  Score=58.15  Aligned_cols=37  Identities=11%  Similarity=0.142  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   39 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAA---GARVVLADVLD   39 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.69  E-value=3.2e-08  Score=58.16  Aligned_cols=38  Identities=18%  Similarity=0.183  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~---G~~V~~~~r~~~   44 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAER---GAKVIGTATSES   44 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57899999999999999999999997   689999998743

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.69  E-value=3e-08  Score=58.72  Aligned_cols=40  Identities=13%  Similarity=0.220  Sum_probs=35.1

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...+++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   45 (264)
T 3ucx_A            6 GGLLTDKVVVISGVGPALGTTLARRCAEQ---GADLVLAARTV   45 (264)
T ss_dssp             -CTTTTCEEEEESCCTTHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCcCCcEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCH
Confidence            34578899999999999999999999997   68999999864

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=98.69  E-value=3e-08  Score=58.09  Aligned_cols=37  Identities=16%  Similarity=0.100  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+|+++||||+|+||+++++.|+++   +++|+++++..
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~---G~~V~~~~~~~   38 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEE---GYNVAVNYAGS   38 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            45789999999999999999999998   68898888753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.69  E-value=3.3e-08  Score=57.16  Aligned_cols=50  Identities=22%  Similarity=0.226  Sum_probs=38.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC-CCChHHHHHHHh
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK-GSSPEERVKNML   63 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~-~~~~~~~~~~~~   63 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.. +....+.+++++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~~~D~~~~~~v~~~~   54 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESE---HTIVHVASRQTGLDISDEKSVYHYF   54 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCST---TEEEEEESGGGTCCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEecCCcccCCCCHHHHHHHH
Confidence            46789999999999999999999987   689999998753 333344444443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.69  E-value=3.6e-08  Score=57.82  Aligned_cols=37  Identities=14%  Similarity=0.275  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r~~   39 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKE---GARLVACDIEE   39 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   68999999864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.69  E-value=2.7e-08  Score=57.88  Aligned_cols=36  Identities=22%  Similarity=0.155  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE-eC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~-r~   49 (67)
                      +++++++||||+|+||++++++|+++   +++|++++ |+
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~---G~~V~~~~~r~   39 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNM---GANIVLNGSPA   39 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEECTT
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCcC
Confidence            46789999999999999999999997   67899884 44

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.69  E-value=2.8e-08  Score=58.69  Aligned_cols=38  Identities=21%  Similarity=0.221  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+..
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~---G~~V~~~~r~~~   64 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSL---GARVVLTARDVE   64 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999997   688999998753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.68  E-value=3.9e-08  Score=57.24  Aligned_cols=35  Identities=14%  Similarity=0.132  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+|+||++++++|+++   +++|++++|++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~---G~~V~~~~r~~   36 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLAR---GDRVAALDLSA   36 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            578999999999999999999997   68999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.68  E-value=2.8e-08  Score=58.92  Aligned_cols=38  Identities=16%  Similarity=0.278  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+++||+++++.|+++   +.+|++++|...
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   46 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALE---SVNLVLHYHQAK   46 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTS---SCEEEEEESCGG
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEecCcc
Confidence            67899999999999999999999997   689999887543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.68  E-value=4.2e-08  Score=57.41  Aligned_cols=35  Identities=14%  Similarity=0.016  Sum_probs=31.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|+||+++++.|+++   +++|++++|++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~~   36 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAA---GHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCch
Confidence            57999999999999999999997   689999999764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.68  E-value=3.3e-08  Score=57.72  Aligned_cols=38  Identities=16%  Similarity=0.121  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|++.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~---G~~v~~~~r~~~   40 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASK---GATVVGTATSQA   40 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            46789999999999999999999997   689999998743

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.68  E-value=3.9e-08  Score=57.47  Aligned_cols=37  Identities=27%  Similarity=0.319  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++||||+|+||+++++.|+++   +++|++++|+.+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~---G~~V~~~~r~~~   38 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVER---GHQVSMMGRRYQ   38 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            3678999999999999999999997   689999999743

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.67  E-value=3.1e-08  Score=59.03  Aligned_cols=38  Identities=26%  Similarity=0.308  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++||||+|+||+++++.|++.   +.+|++++|+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   39 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVA---GAKILLGARRQA   39 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            46789999999999999999999997   689999998743

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.67  E-value=2.3e-08  Score=58.86  Aligned_cols=37  Identities=22%  Similarity=0.228  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r~~   40 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGE---GAKVAFSDINE   40 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999998864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.67  E-value=4.2e-08  Score=58.27  Aligned_cols=36  Identities=28%  Similarity=0.235  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~~~   43 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEE---GADIILFDIC   43 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC---CCeEEEEccc
Confidence            67899999999999999999999998   6899999986

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.67  E-value=4.3e-08  Score=57.74  Aligned_cols=38  Identities=18%  Similarity=0.329  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++++|+..
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   42 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATD---GYRVVLIARSKQ   42 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHH---TCEEEEEESCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56889999999999999999999998   689999998753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.67  E-value=1.1e-07  Score=56.58  Aligned_cols=37  Identities=11%  Similarity=0.026  Sum_probs=33.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++++++||||+|+||+++++.|+++   +.+|++++|.
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~---G~~V~~~~r~   44 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAE---GADIIAVDIA   44 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHc---CCEEEEEecc
Confidence            467899999999999999999999998   6899999884

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.67  E-value=3e-08  Score=58.80  Aligned_cols=37  Identities=16%  Similarity=0.242  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   40 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFARE---GAKVTITGRHA   40 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   68999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.67  E-value=2.9e-08  Score=59.05  Aligned_cols=38  Identities=21%  Similarity=0.290  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~---G~~V~~~~r~~~   63 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAA---GARVAVADRAVA   63 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEECSSCCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56889999999999999999999997   689999998754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.67  E-value=4.7e-08  Score=56.67  Aligned_cols=36  Identities=19%  Similarity=0.184  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||++++++|+++   +++|++++|+.+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   37 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARD---GYALALGARSVD   37 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            578999999999999999999997   688999998743

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.67  E-value=2.7e-08  Score=59.60  Aligned_cols=39  Identities=23%  Similarity=0.132  Sum_probs=32.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|++.   +++|++++|+.+
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   68 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAE---GYSVVITGRRPD   68 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            357899999999999999999999997   689999998753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.67  E-value=4.5e-08  Score=58.37  Aligned_cols=37  Identities=22%  Similarity=0.256  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   56 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKE---GLRVFVCARGE   56 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.67  E-value=4.5e-08  Score=58.08  Aligned_cols=37  Identities=24%  Similarity=0.374  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~---G~~V~~~~r~~   40 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFARE---GASLVAVDREE   40 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999864

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.66  E-value=4.6e-08  Score=58.32  Aligned_cols=39  Identities=23%  Similarity=0.294  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++++||||+|+||+++++.|+++   +.+|++++|+..
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   62 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRH---GCHTVIASRSLP   62 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESCHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            467899999999999999999999997   679999998743

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.66  E-value=4.2e-08  Score=58.35  Aligned_cols=37  Identities=19%  Similarity=0.318  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~---G~~Vi~~~r~~   64 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHAD---GLGVVIADLAA   64 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            67889999999999999999999997   68999999864

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.66  E-value=3.7e-08  Score=57.01  Aligned_cols=35  Identities=26%  Similarity=0.344  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~---G~~V~~~~r~~   39 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAK---GYRVGLMARDE   39 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            578999999999999999999997   68999999864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.66  E-value=4.9e-08  Score=58.02  Aligned_cols=37  Identities=24%  Similarity=0.419  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   55 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGL---GARVYTCSRNE   55 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.66  E-value=4.9e-08  Score=57.36  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~---G~~V~~~~r~~   43 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKG---GAKVVIVDRDK   43 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            56889999999999999999999998   68999999874

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.66  E-value=7.9e-08  Score=57.33  Aligned_cols=39  Identities=18%  Similarity=0.042  Sum_probs=34.8

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~---G~~V~~~~~~~   45 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQE---GADIIAVDICK   45 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeccc
Confidence            3467899999999999999999999998   68999999873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.66  E-value=5.3e-08  Score=56.78  Aligned_cols=36  Identities=25%  Similarity=0.393  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+++||||+|+||+++++.|+++   +++|++++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~---G~~V~~~~r~~~   37 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVAR---GYRVAIASRNPE   37 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            578999999999999999999997   689999999753

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.65  E-value=5.2e-08  Score=57.53  Aligned_cols=37  Identities=24%  Similarity=0.435  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||+|+||+++++.|+++   +++|++++|++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~---G~~V~~~~r~~   42 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEG---GAEVLLTGRNE   42 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            67899999999999999999999998   68999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.65  E-value=5.2e-08  Score=58.27  Aligned_cols=37  Identities=14%  Similarity=0.216  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~---G~~V~~~~r~~   61 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKN---GAYVVVADVNE   61 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.65  E-value=5e-08  Score=58.87  Aligned_cols=38  Identities=18%  Similarity=0.256  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||++++++|+++   +++|++++|+.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~---G~~V~~~~r~~~   66 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARR---GARLVLSDVDQP   66 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            56789999999999999999999998   689999998743

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.65  E-value=2.5e-08  Score=59.51  Aligned_cols=36  Identities=17%  Similarity=0.196  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|.
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~   64 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARA---GAHVLAWGRT   64 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCH
Confidence            56889999999999999999999997   6899998865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=98.65  E-value=6e-08  Score=57.74  Aligned_cols=38  Identities=13%  Similarity=0.195  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||+|+||+++++.|+++   +.+|++++|+..
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~~   41 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARD---GANVAIAAKSAV   41 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCCS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHC---CCEEEEEeccch
Confidence            56899999999999999999999998   689999999765

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.65  E-value=5.4e-08  Score=57.90  Aligned_cols=37  Identities=24%  Similarity=0.392  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   43 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNS---GARVVICDKDE   43 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57889999999999999999999997   68999999864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.65  E-value=3.9e-08  Score=58.21  Aligned_cols=38  Identities=21%  Similarity=0.316  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.+
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   45 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARA---GANVAVAGRSTA   45 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57899999999999999999999997   689999998743

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.65  E-value=5.5e-08  Score=57.89  Aligned_cols=37  Identities=27%  Similarity=0.282  Sum_probs=33.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~---G~~V~~~~r~~   44 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEA---GADIAICDRCE   44 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHC---CCeEEEEeCCc
Confidence            67899999999999999999999998   68999999964

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.65  E-value=4.5e-08  Score=58.44  Aligned_cols=37  Identities=30%  Similarity=0.494  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~---G~~V~~~~r~~   63 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEA---GARVFICARDA   63 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999998864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.65  E-value=4.3e-08  Score=58.61  Aligned_cols=37  Identities=19%  Similarity=0.216  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~---G~~V~~~~r~~   57 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQT---GYRVVIHYHNS   57 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHH---TCEEEEEESSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCeEEEEeCCc
Confidence            67889999999999999999999998   68999999975

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.65  E-value=3.2e-08  Score=58.36  Aligned_cols=37  Identities=11%  Similarity=0.073  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCCh--HHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~--iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+  ||+++++.|+++   +.+|++++|+.
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~   43 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEA---GARLIFTYAGE   43 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSG
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEecCch
Confidence            57899999999988  999999999997   68999998874

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.64  E-value=3.8e-08  Score=58.03  Aligned_cols=36  Identities=31%  Similarity=0.569  Sum_probs=30.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+||||+||||+++++.|+++ ..+++|++++|++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~-~~g~~V~~~~r~~~   36 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKT-VPASQIVAIVRNPA   36 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTT-SCGGGEEEEESCTT
T ss_pred             CEEEEcCCchHHHHHHHHHHhh-CCCceEEEEEcChH
Confidence            4899999999999999999985 12579999999765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.64  E-value=6.2e-08  Score=58.02  Aligned_cols=38  Identities=11%  Similarity=0.334  Sum_probs=34.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   44 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAAD---GANVALVAKSAE   44 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTT---TCEEEEEESCCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECChh
Confidence            57899999999999999999999997   689999999865

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.64  E-value=4.7e-08  Score=57.42  Aligned_cols=37  Identities=19%  Similarity=0.222  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~---G~~V~~~~r~~   40 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAAD---GATVIVSDINA   40 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            67899999999999999999999998   68999998864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.64  E-value=3.8e-08  Score=58.66  Aligned_cols=38  Identities=16%  Similarity=0.148  Sum_probs=34.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~   62 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARR---GAMVIGTATTE   62 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            367889999999999999999999998   68999999864

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.64  E-value=4.2e-08  Score=58.45  Aligned_cols=37  Identities=14%  Similarity=0.258  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   40 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQE---GANVTITGRSS   40 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56789999999999999999999997   68999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.64  E-value=4.6e-08  Score=57.66  Aligned_cols=37  Identities=22%  Similarity=0.276  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   39 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKA---GATVYITGRHL   39 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46789999999999999999999997   68999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.64  E-value=4.5e-08  Score=58.37  Aligned_cols=37  Identities=19%  Similarity=0.156  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   63 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRR---GCKVIVNYANS   63 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            56889999999999999999999997   68999999875

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.63  E-value=9.7e-08  Score=56.56  Aligned_cols=26  Identities=35%  Similarity=0.678  Sum_probs=24.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      +++|+|+||||+||||++++++|+++
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~   29 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADG   29 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhc
Confidence            56789999999999999999999997

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.63  E-value=9.5e-08  Score=56.91  Aligned_cols=41  Identities=24%  Similarity=0.362  Sum_probs=36.9

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+++||||++.||+.+++.|.+.   +.+|++.+|+.+
T Consensus         6 ~dlf~GK~alVTGas~GIG~aia~~la~~---Ga~Vv~~~~~~~   46 (242)
T 4b79_A            6 HDIYAGQQVLVTGGSSGIGAAIAMQFAEL---GAEVVALGLDAD   46 (242)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSTT
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            34578999999999999999999999998   789999999764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.63  E-value=5.4e-08  Score=58.08  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|++
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~   78 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKS---VSHVICISRTQ   78 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTT---SSEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence            45789999999999999999999997   67899888763

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.63  E-value=6.3e-08  Score=57.93  Aligned_cols=36  Identities=25%  Similarity=0.062  Sum_probs=32.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~~~   62 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAAS---GFDIAITGIG   62 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESC
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHC---CCeEEEEeCC
Confidence            56789999999999999999999997   6899999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.62  E-value=5e-08  Score=57.12  Aligned_cols=35  Identities=17%  Similarity=0.227  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~---G~~V~~~~r   36 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQ---GANVVVNYA   36 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeC
Confidence            46789999999999999999999997   689999988

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.62  E-value=7.7e-08  Score=57.57  Aligned_cols=36  Identities=17%  Similarity=0.144  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +.+++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~---G~~V~~~~r~   58 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKA---GANIVLNGFG   58 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEECCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56789999999999999999999998   6899999884

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.62  E-value=5.3e-08  Score=57.73  Aligned_cols=38  Identities=26%  Similarity=0.337  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.+
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   45 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAE---GANVLINGRREE   45 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            67899999999999999999999997   689999998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.62  E-value=6.4e-08  Score=56.24  Aligned_cols=35  Identities=17%  Similarity=0.291  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-------eEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-------AIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-------~v~~~~r~~   50 (67)
                      +++++||||+|+||++++++|++.   ++       +|++++|++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~---G~~~~~~~~~V~~~~r~~   43 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARA---ARHHPDFEPVLVLSSRTA   43 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHH---TTTCTTCCEEEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHh---cCcccccceEEEEEeCCH
Confidence            578999999999999999999998   56       899998864

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.62  E-value=1.7e-07  Score=55.33  Aligned_cols=36  Identities=11%  Similarity=0.236  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|+++++.
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~---G~~V~~~~~~   41 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQE---GANVVLTYNG   41 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCC
Confidence            57899999999999999999999998   6888888554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.61  E-value=4.6e-08  Score=58.31  Aligned_cols=37  Identities=24%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~---G~~V~~~~r~~   60 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVA---GARILINGTDP   60 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEECCSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            67899999999999999999999997   68999988864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.61  E-value=5.6e-08  Score=58.60  Aligned_cols=37  Identities=14%  Similarity=0.280  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~---G~~V~~~~r~~   60 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKE---GAQVTITGRNE   60 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999997   68999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.61  E-value=5.7e-08  Score=57.61  Aligned_cols=38  Identities=18%  Similarity=0.200  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.+
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~   55 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAA---GARLVLSGRDVS   55 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            56899999999999999999999997   689999998643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.61  E-value=7.9e-08  Score=56.58  Aligned_cols=37  Identities=24%  Similarity=0.333  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   43 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDA---GAQVVVLDIRG   43 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHH---TCEEEEEESSC
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCch
Confidence            57889999999999999999999998   68999999853

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.61  E-value=6.3e-08  Score=57.59  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~---G~~V~~~~r~~   61 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQ---GAIVGLHGTRE   61 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            56889999999999999999999998   68999998864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.61  E-value=8.4e-08  Score=57.34  Aligned_cols=37  Identities=19%  Similarity=0.418  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~   39 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAE---GARVAVLDKSA   39 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCCH
Confidence            56889999999999999999999998   68999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.61  E-value=6.4e-08  Score=58.45  Aligned_cols=42  Identities=17%  Similarity=0.239  Sum_probs=35.9

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |.+.+++|+++||||++.||+.+++.|++.   |.+|++.+|+.+
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~---Ga~V~i~~r~~~   64 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAE---GARVFITGRRKD   64 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            344578999999999999999999999998   789999998743

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.61  E-value=7.7e-08  Score=56.62  Aligned_cols=36  Identities=25%  Similarity=0.266  Sum_probs=32.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++||||+|+||+++++.|+++   +++|++++|+.
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~---G~~v~~~~~~~   41 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAK---GYSVTVTYHSD   41 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHC---CCEEEEEcCCC
Confidence            4678999999999999999999997   68999987764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.61  E-value=5.6e-08  Score=58.17  Aligned_cols=37  Identities=16%  Similarity=0.095  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~---G~~V~~~~r~~   63 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADE---GCHVLCADIDG   63 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            67899999999999999999999998   68999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.61  E-value=6.2e-08  Score=57.04  Aligned_cols=36  Identities=22%  Similarity=0.204  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|++.   +++|++++|+..
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   37 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAAD---GFDIAVADLPQQ   37 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECGGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            578999999999999999999998   689999998754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.60  E-value=7.5e-08  Score=56.89  Aligned_cols=37  Identities=16%  Similarity=0.144  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  |+||+++++.|+++   +++|++++|++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~   45 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQND   45 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESST
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEcCcH
Confidence            567899999999  99999999999997   68999999976

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.60  E-value=8.4e-08  Score=57.01  Aligned_cols=38  Identities=5%  Similarity=0.038  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+  |+||+++++.|+++   +++|++++|+..
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~---G~~V~~~~r~~~   43 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQ---GATLAFTYLNES   43 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTT---TCEEEEEESSTT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            467899999999  99999999999997   689999999864

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.60  E-value=4e-08  Score=58.85  Aligned_cols=31  Identities=42%  Similarity=0.705  Sum_probs=25.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|+||||+||||+++++.|+++   + .++++++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~---g-~~v~~~~   32 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSES---N-EIVVIDN   32 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTT---S-CEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhC---C-CEEEEEc
Confidence            47999999999999999999997   4 4455554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.60  E-value=8.9e-08  Score=56.69  Aligned_cols=38  Identities=26%  Similarity=0.396  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+.+
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~---G~~V~~~~r~~~   43 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEA---GAAVAFCARDGE   43 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57899999999999999999999997   689999998743

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.60  E-value=9.2e-08  Score=57.53  Aligned_cols=43  Identities=16%  Similarity=0.181  Sum_probs=34.5

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++++++||||+|+||+++++.|++.+.....|++.+|+.+
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~   71 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLE   71 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHH
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHH
Confidence            3477899999999999999999999997211128999888743

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.60  E-value=6.5e-08  Score=56.69  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=30.8

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +...++++++||||+|+||++++++|+++   +.+|+++++.
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~---G~~v~~~~~~   46 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKD---GFRVVAGCGP   46 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHT---TEEEEEEECT
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            45577899999999999999999999998   6788888843

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.60  E-value=8.2e-08  Score=56.98  Aligned_cols=39  Identities=18%  Similarity=0.091  Sum_probs=33.8

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++++||||+|+||+++++.|++.   +++|++++++.
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~---G~~V~~~~~~~   52 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRL---GAKVVVNYANS   52 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            3467899999999999999999999997   68898877653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.60  E-value=8.1e-08  Score=57.16  Aligned_cols=36  Identities=19%  Similarity=0.209  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|.
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~---G~~V~~~~~~   61 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAA---GAKVAVNYAS   61 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56889999999999999999999998   6899888884

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.60  E-value=5.7e-08  Score=57.35  Aligned_cols=37  Identities=19%  Similarity=0.192  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  |+||+++++.|+++   +++|++++|++
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~   44 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEA---GAEVALSYQAE   44 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHH---TCEEEEEESCG
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            568899999999  99999999999998   68999999875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.60  E-value=6.7e-08  Score=57.80  Aligned_cols=36  Identities=25%  Similarity=0.347  Sum_probs=30.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+||||+||||++++++|+++. .+++|++++|+..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r~~~   36 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKY-GKKNVIASDIVQR   36 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHH-CGGGEEEEESSCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhc-CCCEEEEecCCCc
Confidence            48999999999999999999861 2478999988653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.60  E-value=1.2e-07  Score=55.39  Aligned_cols=37  Identities=19%  Similarity=0.283  Sum_probs=32.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++++++++||||+|+||+++++.|++.   +.+|+++.++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~---G~~v~~~~~~   40 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLAND---GALVAIHYGN   40 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCC
Confidence            467899999999999999999999997   6788876544

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.60  E-value=9.7e-08  Score=56.58  Aligned_cols=38  Identities=21%  Similarity=0.269  Sum_probs=31.7

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++++++++||||+|+||+++++.|++.   +.+|++++++
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~---G~~v~~~~~~   58 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDA---GMAVAVSHSE   58 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTT---TCEEEEEECS
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCC
Confidence            3567889999999999999999999997   6889888854

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.59  E-value=4.7e-08  Score=57.51  Aligned_cols=40  Identities=15%  Similarity=0.070  Sum_probs=35.2

Q ss_pred             hhhccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...+++++++||||+  |+||+++++.|+++   +.+|++++|+.
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~---G~~V~~~~r~~   50 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE---GAELAFTYVGD   50 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSG
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc---CCCEEEEecch
Confidence            345778999999998  99999999999997   68999999874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.59  E-value=5.1e-08  Score=58.42  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++|+.
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~---G~~V~~~~r~~   42 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFARE---GAKVVVTARNG   42 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEECCSCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            57899999999999999999999997   68999998864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.58  E-value=1e-07  Score=56.04  Aligned_cols=35  Identities=26%  Similarity=0.216  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+|+||+++++.|++.   +++|++++|++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~   36 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKD---GFAVAIADYND   36 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            478999999999999999999997   68999999864

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.58  E-value=1.4e-07  Score=57.61  Aligned_cols=38  Identities=26%  Similarity=0.369  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|+||+++++.|++.   +++|++.+|+..
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~---G~~V~~~~r~~~   40 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGA---GHRVYASMRDIV   40 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEecCccc
Confidence            35789999999999999999999997   689999988743

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.58  E-value=2e-07  Score=55.46  Aligned_cols=36  Identities=17%  Similarity=0.142  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++.+++
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~---G~~Vv~~~~~   60 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASD---GFTVVINYAG   60 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHH---TCEEEEEESS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEcCC
Confidence            46789999999999999999999998   6788887554

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.58  E-value=1.9e-07  Score=56.68  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=33.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~---G~~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAE---GARVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCc
Confidence            57889999999999999999999998   6899999886

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.57  E-value=1.1e-07  Score=58.68  Aligned_cols=39  Identities=18%  Similarity=0.240  Sum_probs=35.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++++++||||+|+||.++++.|+++   +.+|++++|+...
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~---Ga~Vvl~~r~~~~   81 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKD---GANIVIAAKTAQP   81 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESCCSC
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHC---CCEEEEEECChhh
Confidence            67899999999999999999999997   6899999997653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.57  E-value=1.1e-07  Score=56.32  Aligned_cols=36  Identities=19%  Similarity=0.144  Sum_probs=30.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +.++++++||||+|+||++++++|++.   +.+|+++.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~---G~~V~~~~~   58 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQ---GWRVGVNYA   58 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcC
Confidence            456789999999999999999999998   678877643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.57  E-value=8.4e-08  Score=57.26  Aligned_cols=37  Identities=16%  Similarity=0.074  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++||||+|+||+++++.|+++   +.+|++++|+.
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~   62 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGA---GYGVALAGRRL   62 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            56789999999999999999999998   68999999864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.57  E-value=1.1e-07  Score=57.29  Aligned_cols=38  Identities=18%  Similarity=0.047  Sum_probs=34.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+++||+++++.|++.   +.+|++++|++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~~~~   62 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLARE---GADIIAIDVCK   62 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeccc
Confidence            467899999999999999999999998   68999999873

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.56  E-value=8.4e-08  Score=56.45  Aligned_cols=40  Identities=18%  Similarity=0.249  Sum_probs=33.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++....+++|++++|+.
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~   43 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE   43 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCH
Confidence            5678999999999999999999998200168999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.56  E-value=1.4e-07  Score=56.20  Aligned_cols=37  Identities=19%  Similarity=0.251  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++++.
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~---G~~V~~~~~~~   65 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALE---GAAVALTYVNA   65 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCC
Confidence            56889999999999999999999997   68888887653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.56  E-value=1.7e-07  Score=56.11  Aligned_cols=39  Identities=21%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++|+++||||++.||+++++.|.+.   +.+|++.+|+.+.
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~---Ga~Vv~~~r~~~~   43 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEE---RAIPVVFARHAPD   43 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCccc
Confidence            78999999999999999999999997   6899999998663

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.56  E-value=8.6e-08  Score=56.69  Aligned_cols=36  Identities=28%  Similarity=0.199  Sum_probs=30.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      .++++++||||+|+||+++++.|+++   +++|+++ +|+
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~---G~~vv~~~~r~   38 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAEN---GYNIVINYARS   38 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            35789999999999999999999997   6788876 554

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.56  E-value=7.1e-08  Score=55.92  Aligned_cols=34  Identities=21%  Similarity=0.199  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      +++++||||+|+||++++++|+++   +++|+++ +|+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~---G~~v~~~~~r~   35 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAED---GFALAIHYGQN   35 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTT---TCEEEEEESSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            368999999999999999999997   6788887 665

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.55  E-value=1.5e-07  Score=56.43  Aligned_cols=37  Identities=16%  Similarity=0.089  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +.+|++++|+.
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~r~~   62 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAAD---GVTVGALGRTR   62 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            45789999999999999999999998   68999999874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.55  E-value=2.4e-07  Score=55.18  Aligned_cols=37  Identities=14%  Similarity=0.107  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCCh--HHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~--iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+  ||+++++.|+++   +++|++++|+.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~   62 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHRE---GAELAFTYVGQ   62 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHT---TCEEEEEECTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHc---CCEEEEeeCch
Confidence            56789999999977  999999999997   68999999976

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.55  E-value=8.5e-08  Score=55.64  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      +++++||||+|+||++++++|+++   +++|+++ +|+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~---G~~v~~~~~r~   35 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKA---GCKVLVNYARS   35 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHC---CCEEEEEcCCC
Confidence            478999999999999999999997   6788885 565

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.55  E-value=1.2e-07  Score=57.06  Aligned_cols=36  Identities=25%  Similarity=0.260  Sum_probs=32.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~---G~~V~~~~~~   82 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYARE---GADVAINYLP   82 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEECCG
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56889999999999999999999998   6889888876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.54  E-value=8.8e-08  Score=57.16  Aligned_cols=37  Identities=11%  Similarity=0.078  Sum_probs=33.6

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+  |+||+++++.|++.   +++|++++|+.
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~   57 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHRE---GAQLAFTYATP   57 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHT---TCEEEEEESSG
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            567899999999  99999999999997   68999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.54  E-value=1.3e-07  Score=57.41  Aligned_cols=36  Identities=14%  Similarity=0.078  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +.+|++++|+
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~---G~~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQD---GADIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHC---CCeEEEEecc
Confidence            56889999999999999999999998   6899999876

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.53  E-value=1.2e-07  Score=54.95  Aligned_cols=34  Identities=24%  Similarity=0.263  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|+||+++++.|++.   +.+|++++|+.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~---G~~V~~~~r~~   35 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAE---GKATYLTGRSE   35 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHT---TCCEEEEESCH
T ss_pred             CEEEEecCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57999999999999999999997   67899999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.51  E-value=1.7e-07  Score=55.40  Aligned_cols=36  Identities=19%  Similarity=0.174  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +.+++++||||+|+||++++++|+++   +.+|+++.+.
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~---G~~v~i~~~r   59 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAAD---GFNIGVHYHR   59 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCC
Confidence            56789999999999999999999998   6788776644

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.50  E-value=2.4e-07  Score=55.44  Aligned_cols=38  Identities=21%  Similarity=0.268  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|.+.   +.+|++.+|+..
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~---Ga~V~~~~r~~~   46 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLEL---GAQVLTTARARP   46 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHc---CCEEEEEECCch
Confidence            68999999999999999999999998   789999999654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=98.50  E-value=1.7e-07  Score=56.20  Aligned_cols=37  Identities=22%  Similarity=0.184  Sum_probs=32.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE-eCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~-r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++ |+.
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~---G~~V~~~~~r~~   44 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAE---GYAVCLHYHRSA   44 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEcCCCH
Confidence            56889999999999999999999997   68999999 764

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.50  E-value=2.1e-07  Score=54.37  Aligned_cols=38  Identities=24%  Similarity=0.338  Sum_probs=32.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||+|+||+++++.|++.  .++.|++.+|++.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~--~g~~v~~~~~~~~   40 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQN--KNHTVINIDIQQS   40 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTS--TTEEEEEEESSCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhc--CCcEEEEeccccc
Confidence            5678999999999999999999983  2678988888765

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.49  E-value=1.6e-07  Score=56.51  Aligned_cols=38  Identities=3%  Similarity=-0.024  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+|  +||+++++.|+++   +.+|++++|+..
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~   67 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSET   67 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            5788999999997  9999999999998   689999999753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.49  E-value=2e-07  Score=55.21  Aligned_cols=37  Identities=14%  Similarity=0.083  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||  +|+||+++++.|++.   +++|++++|+.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~---G~~V~~~~r~~   43 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQ---GAQLVLTGFDR   43 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHT---TCEEEEEECSC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHC---CCEEEEEecCh
Confidence            56889999999  999999999999997   68999999875

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=98.49  E-value=1.9e-07  Score=57.04  Aligned_cols=37  Identities=22%  Similarity=0.184  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE-eCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV-RDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~-r~~   50 (67)
                      +++++++||||+|+||+++++.|++.   +++|++++ |+.
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~---G~~Vv~~~~r~~   81 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAE---GYAVCLHYHRSA   81 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEcCCCH
Confidence            56789999999999999999999997   68999998 754

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.48  E-value=9.1e-08  Score=56.29  Aligned_cols=35  Identities=17%  Similarity=-0.010  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+++||||+|+||+++++.|+++   +++|++++|+..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~   36 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEA---GHTVACHDESFK   36 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHT---TCEEEECCGGGG
T ss_pred             eEEEEeCCCchHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            57999999999999999999997   689999999754

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.47  E-value=3e-07  Score=55.00  Aligned_cols=38  Identities=13%  Similarity=0.206  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|.+.   +.+|++.+|+++
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~---Ga~Vv~~~~~~~   42 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALN---DSIVVAVELLED   42 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCHH
Confidence            78999999999999999999999997   689999998753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.46  E-value=2.8e-07  Score=54.61  Aligned_cols=38  Identities=8%  Similarity=0.051  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||+|  .||.++++.|.+.   |.+|++.+|++.
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~   43 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKER   43 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            6799999999876  8999999999998   789999999754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.46  E-value=1.7e-07  Score=56.08  Aligned_cols=38  Identities=16%  Similarity=0.097  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|.+.   |.+|++.+|+++
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~---Ga~Vvi~~~~~~   44 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAA---GARVILNDIRAT   44 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEECCSCHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            68999999999999999999999998   789999988643

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.45  E-value=2e-07  Score=54.82  Aligned_cols=34  Identities=21%  Similarity=0.284  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|+||+++++.|++.   +++|++++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~   34 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQ---GHKVIATGRRQ   34 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            57999999999999999999997   68999999864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.45  E-value=2e-07  Score=55.67  Aligned_cols=36  Identities=14%  Similarity=0.229  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++ ++++||||+|+||+++++.|++.   +++|++++|++
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~---G~~V~~~~r~~   55 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEA---GWSLVLTGRRE   55 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            44 78999999999999999999997   68999999864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.45  E-value=3.5e-07  Score=55.04  Aligned_cols=38  Identities=5%  Similarity=0.001  Sum_probs=33.7

Q ss_pred             hccCCeEEEEcCCCh--HHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGF--MGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~--iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|+  ||+++++.|++.   +.+|++++|+.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~---G~~V~~~~r~~   67 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREA---GAELAFTYQGD   67 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHT---TCEEEEEECSH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            367899999999988  999999999998   68899998873

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.44  E-value=3.1e-07  Score=53.60  Aligned_cols=36  Identities=31%  Similarity=0.441  Sum_probs=29.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|+||+++++.|++    +..|++++|++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~----g~~v~~~~r~~   38 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR----DHIVYALGRNP   38 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT----TSEEEEEESCH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC----CCeEEEEeCCH
Confidence            4678999999999999999999976    36899998864

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.44  E-value=2e-07  Score=56.94  Aligned_cols=38  Identities=16%  Similarity=0.172  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCC----CcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~----~~~~v~~~~r~~   50 (67)
                      .++|+||||+||||++++..|+.++.    ...+|+++++.+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            46899999999999999999988621    013899998763

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.43  E-value=3.3e-07  Score=54.03  Aligned_cols=38  Identities=18%  Similarity=0.222  Sum_probs=33.5

Q ss_pred             ccCCeEEEEcCCC-hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G-~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+| .||++++++|+++   +++|++++|+..
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~---G~~V~~~~r~~~   58 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHER   58 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHC---CCEEEEecCCHH
Confidence            6789999999998 5999999999998   689999998743

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.42  E-value=1.9e-07  Score=54.67  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-E--eCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-V--RDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~--r~~   50 (67)
                      +|+++||||+|+||+++++.|+++   +++|+++ +  |++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~~~~r~~   38 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQD---GYTVVCHDASFADA   38 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHT---TCEEEECCGGGGSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHC---CCEEEEecCCcCCH
Confidence            468999999999999999999997   6899998 5  764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.40  E-value=3.3e-07  Score=55.90  Aligned_cols=36  Identities=17%  Similarity=0.207  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|+||+++++.|+++   +++|++.++.
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~---Ga~Vv~~~~~   42 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAER---GALVVVNDLG   42 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEcCC
Confidence            57899999999999999999999997   6899987663

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.39  E-value=6.7e-07  Score=52.64  Aligned_cols=38  Identities=18%  Similarity=0.142  Sum_probs=34.1

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++||||+  ++||.+++++|++.   +.+|++++|+..
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~---G~~v~~~~~~~~   57 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEM---GAAVAITYASRA   57 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHT---SCEEEECBSSSS
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHC---CCeEEEEeCCcc
Confidence            678999999999  89999999999997   689999888754

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.39  E-value=2.4e-07  Score=56.58  Aligned_cols=36  Identities=17%  Similarity=0.202  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||||+|+||+++++.|++.   +++|++++|...
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~---G~~v~~v~r~~~   37 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASD---PSQSFKVYATLR   37 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTC---TTCCEEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC---CCceEEEEeecC
Confidence            578999999999999999999997   567777777543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.38  E-value=8.1e-07  Score=57.02  Aligned_cols=38  Identities=32%  Similarity=0.436  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      -.+++++||||+|+||.+++++|+++   +. .|++++|+..
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~---G~~~vvl~~R~~~  262 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARR---GAPHLLLVSRSGP  262 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHH---TCSEEEEEESSGG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHc---CCCEEEEEcCCCC
Confidence            35689999999999999999999998   45 5999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.38  E-value=3.5e-07  Score=51.79  Aligned_cols=32  Identities=25%  Similarity=0.362  Sum_probs=28.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++||||+|+||++++++|+++     +|++++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~   32 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRA   32 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCH
Confidence            57999999999999999999884     788988864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.36  E-value=8.8e-07  Score=52.78  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~---Ga~V~~~~~~~   36 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEA---GDKVCFIDIDE   36 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            478999999999999999999998   78999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.35  E-value=8.3e-07  Score=53.13  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCC--ChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGT--GFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~--G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||+  |+||+++++.|++.   +++|++++|
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~---G~~V~~~~r   42 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAA---GAEILVGTW   42 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHT---TCEEEEEEE
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHC---CCeEEEeec
Confidence            578899999999  99999999999997   678998875

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.35  E-value=1.6e-06  Score=56.10  Aligned_cols=38  Identities=26%  Similarity=0.463  Sum_probs=32.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      -.+++++||||+|+||.+++++|.+.   +. .|++++|+..
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~---G~~~vvl~~R~~~  295 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAE---GAERLVLTSRRGP  295 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHT---TCSEEEEEESSGG
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhC---CCcEEEEEecCCc
Confidence            34689999999999999999999887   45 6888898764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.34  E-value=9.2e-07  Score=52.82  Aligned_cols=38  Identities=18%  Similarity=0.196  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|.+.   +.+|++.+|+..
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~---Ga~Vvi~~r~~~   44 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAA---GAEVVCAARRAP   44 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHc---CCEEEEEeCCcH
Confidence            68999999999999999999999998   789999998754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.32  E-value=1.2e-06  Score=45.50  Aligned_cols=34  Identities=24%  Similarity=0.284  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~   50 (67)
                      +++|+|+|+ |++|+.+++.|.+.   + ++|++++|++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~---g~~~v~~~~r~~   39 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTS---SNYSVTVADHDL   39 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHC---SSEEEEEEESCH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhC---CCceEEEEeCCH
Confidence            468999999 99999999999997   5 7899999864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.27  E-value=1.9e-06  Score=51.75  Aligned_cols=37  Identities=19%  Similarity=0.170  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||+|++|++++..|++.   +.+|++++|+.
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~---G~~V~i~~R~~  153 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGE---GAEVVLCGRKL  153 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEECCH
Confidence            56789999999999999999999997   56799999874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.26  E-value=2.7e-06  Score=54.98  Aligned_cols=37  Identities=30%  Similarity=0.460  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~~   52 (67)
                      +++++||||+|+||.+++++|.++   +. .|++++|+..+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~---Ga~~vvl~~R~~~~  276 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQ---GAAHLVLTSRRGAD  276 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHT---TCSEEEEEESSGGG
T ss_pred             CCEEEEECCCCchHHHHHHHHHHC---CCcEEEEEeCCCCC
Confidence            379999999999999999999987   45 78888887543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.26  E-value=1.6e-06  Score=52.49  Aligned_cols=36  Identities=14%  Similarity=0.086  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||  +++||+++++.|++.   +.+|++++|+
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~---G~~Vv~~~r~   44 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASA---GARVALGTWP   44 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTT---TCEEEEEECH
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHC---CCEEEEEecc
Confidence            57899999999  899999999999997   6889998763

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.24  E-value=9.8e-07  Score=56.26  Aligned_cols=38  Identities=16%  Similarity=0.153  Sum_probs=33.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++++||||+|.||.++++.|.++   +.+|++++|+.
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~---Ga~Vvl~~r~~  247 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARD---GATVVAIDVDG  247 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEECGG
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            357899999999999999999999997   67899998864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.23  E-value=2e-06  Score=51.99  Aligned_cols=36  Identities=14%  Similarity=0.084  Sum_probs=32.0

Q ss_pred             ccCCeEEEEcC--CChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGG--TGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa--~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||  +++||+++++.|++.   +.+|++++|+
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~---G~~Vv~~~r~   44 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAA---GARVLVGTWP   44 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHT---TCEEEEEECH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHC---CCEEEEEecc
Confidence            56889999999  899999999999997   6789998763

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.22  E-value=2.2e-06  Score=50.39  Aligned_cols=37  Identities=30%  Similarity=0.348  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+++||||+|+||+++++.|++.+ .+..|++.+|+.
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g-~~~~v~~~~r~~   38 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLD-KDTVVYGVARSE   38 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHC-SSCEEEEEESCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcC-CCeEEEEecCCH
Confidence            4789999999999999999999972 135788888864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.20  E-value=2.8e-06  Score=55.85  Aligned_cols=36  Identities=14%  Similarity=0.066  Sum_probs=31.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+++++++||||+|+||+++++.|+++   +.+|++++|
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~---Ga~Vv~~~r   51 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAER---GAKVVVNDL   51 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEC--
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeC
Confidence            367899999999999999999999998   689999887

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.19  E-value=4.2e-06  Score=49.67  Aligned_cols=37  Identities=30%  Similarity=0.534  Sum_probs=32.8

Q ss_pred             cCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++++||||                +|.+|.++++.++.+   |++|+++.|+..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~---Ga~V~lv~~~~~   54 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA---GYEVCLITTKRA   54 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT---TCEEEEEECTTS
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            5789999999                999999999999998   789999998643

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.13  E-value=6.3e-06  Score=48.74  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=33.0

Q ss_pred             ccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||                +|.+|.++++.|.++   |.+|++++++.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~---Ga~V~l~~~~~   58 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR---GANVTLVSGPV   58 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT---TCEEEEEECSC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC---CCEEEEEECCc
Confidence            67899999999                699999999999998   78999888753

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=97.99  E-value=1e-05  Score=52.45  Aligned_cols=37  Identities=22%  Similarity=0.260  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEE-EeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIM-VRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~-~r~~   50 (67)
                      -.+++++||||+|.||.+++++|.++   +.. |+++ +|+.
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~---G~~~vvl~~~R~~  287 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARD---GAGHLLLHTTPSG  287 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHH---TCCEEEEEECCCC
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHc---CCCEEEEEeCCCC
Confidence            45789999999999999999999998   454 6666 7774

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.92  E-value=2.6e-05  Score=41.42  Aligned_cols=34  Identities=26%  Similarity=0.261  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+|+|+ |++|+.+++.|.+.   +++|+++++++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~---g~~v~~~d~~~   37 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEK---GHDIVLIDIDK   37 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCH
Confidence            478999987 99999999999987   57899998864

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.91  E-value=1.6e-05  Score=48.78  Aligned_cols=38  Identities=11%  Similarity=0.065  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+|+||+||+|..++..|+.+. ..++|+++++++.
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g-~~~ev~l~Di~~~   45 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNP-LVSVLHLYDVVNA   45 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCT-TEEEEEEEESSSH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEeCCCc
Confidence            4689999999999999999988762 2378999887653

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.91  E-value=2.5e-05  Score=42.83  Aligned_cols=41  Identities=15%  Similarity=0.246  Sum_probs=31.9

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++....+++++|+|+ |.+|..+++.|...   +.+|++++|++.
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~---g~~V~vid~~~~   53 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSS---GHSVVVVDKNEY   53 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCGG
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            455567789999986 99999999999887   579999998653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.89  E-value=3.8e-05  Score=48.98  Aligned_cols=38  Identities=16%  Similarity=0.002  Sum_probs=33.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHh-hCCCcceEEEEEeCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~-~~~~~~~v~~~~r~~~~   52 (67)
                      .+|+++||||++.||.+++..|.. .   |.+|++++|+...
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~---GA~Vv~~~r~~~~   98 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGF---GADTLGVFFEKPG   98 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHH---CCEEEEEECCCCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhC---CCEEEEEeCCchh
Confidence            368999999999999999999999 8   6899999987553

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.88  E-value=1.7e-05  Score=42.73  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=29.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..++++|+|+ |.+|+++++.|.+.   +++|+++++++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~---g~~V~~id~~~   39 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAA---GKKVLAVDKSK   39 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHT---TCCEEEEESCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEECCH
Confidence            3468999998 99999999999987   68999999864

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.85  E-value=3.5e-05  Score=43.93  Aligned_cols=35  Identities=29%  Similarity=0.312  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|+||+|++|+.++..|.+.   +++|++++|+++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~---g~~V~~~~r~~~   35 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATL---GHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESSHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            47999999999999999999987   578999998743

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.84  E-value=2.3e-05  Score=41.77  Aligned_cols=35  Identities=20%  Similarity=0.276  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++++|+|+ |.+|+.+++.|.+.   +++|+++++++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~---g~~v~~~d~~~   39 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRM---GHEVLAVDINE   39 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHT---TCCCEEEESCH
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4567999998 99999999999987   56888888753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.82  E-value=3.6e-05  Score=43.49  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|++++|++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~---G~~V~~~~~~~   73 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMI---GARIYTTAGSD   73 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHH---TCEEEEEESSH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4689999999999999999998887   57899888763

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.81  E-value=5.5e-05  Score=48.07  Aligned_cols=39  Identities=13%  Similarity=0.005  Sum_probs=33.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHh-hCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLR-SFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~-~~~~~~~v~~~~r~~~~   52 (67)
                      ..+|+++||||++.||.+++..|.+ .   +.+|++++|+...
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~---GA~Vv~~~~~~~~   84 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGC---GADTLGVFFERPG   84 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHH---CCEEEEEECCCCC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhc---CCEEEEEeCCchh
Confidence            3468999999999999999999999 8   6899988886543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.79  E-value=4.2e-05  Score=46.52  Aligned_cols=35  Identities=11%  Similarity=0.035  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++++++||||++  .||.++++.|++.   +.+|++.+|+
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~---G~~Vv~~~~~   37 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKR---NVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHT---TCEEEEEECH
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHC---CCEEEEEecC
Confidence            367899999875  9999999999997   6888866643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.79  E-value=2.9e-05  Score=47.66  Aligned_cols=37  Identities=14%  Similarity=0.087  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCC----CcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~----~~~~v~~~~r~   49 (67)
                      .++|+||||+||+|++++..|+...-    ...+|.++++.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            46899999999999999999988621    01378888876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.78  E-value=2.7e-05  Score=51.19  Aligned_cols=37  Identities=16%  Similarity=0.277  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++||||++.||+.+++.|.++   +.+|++.+|..
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~---Ga~Vv~~~~~~   42 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKL---GAKVVVNDLGG   42 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHc---CCEEEEEeCCc
Confidence            57899999999999999999999998   68999888754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.74  E-value=3.9e-05  Score=50.48  Aligned_cols=36  Identities=17%  Similarity=0.181  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||++.||+.+++.|.+.   +.+|++.++.
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~---Ga~Vv~~~~~  355 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKY---GAKVVVNDFK  355 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHC---CCEEEEEeCc
Confidence            56789999999999999999999998   6889888763

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.71  E-value=8.2e-05  Score=40.62  Aligned_cols=34  Identities=12%  Similarity=0.115  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++++|+|+ |.+|+++++.|.+.   +++|+++++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~---g~~V~vid~~~   36 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQR---GQNVTVISNLP   36 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHT---TCCEEEEECCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHC---CCCEEEEECCC
Confidence            457999986 99999999999987   68999999863

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.71  E-value=7.2e-05  Score=47.55  Aligned_cols=39  Identities=8%  Similarity=0.026  Sum_probs=33.4

Q ss_pred             ccCCeEEEEcCCChHHHH--HHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKL--LIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~--l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ..+|+++||||++.||.+  ++..|.+.   +.+|++++|+...
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~---Ga~Vi~~~r~~~~   98 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGP---EAHTIGVSYETGA   98 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSS---CCEEEEEECCCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhC---CCEEEEEecCcch
Confidence            567899999999999999  99888876   6899999987543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.70  E-value=7.5e-05  Score=45.54  Aligned_cols=34  Identities=15%  Similarity=0.199  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++|+||||+||+|++++..|+... ...++.++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~-~~~el~L~Di   34 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGR   34 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCC-CCCEEEEEcC
Confidence            479999999999999999998862 2346888887

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=97.64  E-value=0.00014  Score=49.17  Aligned_cols=38  Identities=29%  Similarity=0.461  Sum_probs=32.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHH-hhCCCcc-eEEEEEeCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLL-RSFPDIG-AIYIMVRDKKG   52 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~-~~~~~~~-~v~~~~r~~~~   52 (67)
                      .+++++||||+|.||..++++|. ++   +. .|++++|+...
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~---Ga~~vvl~~R~~~~  568 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIER---GVRNLVLVSRRGPA  568 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTS---SCCEEEEEESSGGG
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHc---CCcEEEEeccCccc
Confidence            47899999999999999999998 55   44 68899998543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=97.60  E-value=0.00012  Score=53.53  Aligned_cols=36  Identities=17%  Similarity=0.315  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCCh-HHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~-iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++||||+|. ||.++++.|++.   +.+|+++++.
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~---GA~VVl~~~R  686 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSG---GAKVIVTTSR  686 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHC---CCEEEEEecC
Confidence            56789999999999 999999999997   6788888644

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=97.59  E-value=9e-05  Score=53.50  Aligned_cols=37  Identities=22%  Similarity=0.386  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCCh-HHHHHHHHHHhhCCCcceEEEEE-eCC
Q psy17490         11 YRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMV-RDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~-iG~~l~~~l~~~~~~~~~v~~~~-r~~   50 (67)
                      +++++++||||++. ||.++++.|++.   +.+|++++ |+.
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~---GA~VVL~~~R~~  512 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQG---GAKVVVTTSRFS  512 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHH---TCEEEEEESSCS
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHC---cCEEEEEeCCCH
Confidence            56789999999998 999999999998   67888874 543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.56  E-value=0.00013  Score=46.59  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++|+|+| +|++|+++++.|++.   +.+|++.+|+.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~---G~~V~v~~R~~   36 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDS---GIKVTVACRTL   36 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTT---TCEEEEEESSH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhC---cCEEEEEECCH
Confidence            357899997 899999999999976   57899998863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.54  E-value=0.00023  Score=43.42  Aligned_cols=37  Identities=11%  Similarity=0.076  Sum_probs=31.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++|+|++|.+|..+++.+...   +.+|++++|++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~---Ga~V~~~~~~~~  205 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAM---GYRVLGIDGGEG  205 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECSTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC---CCcEEEEcCCHH
Confidence            4689999999999999999998876   578999988654

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.53  E-value=0.00017  Score=43.79  Aligned_cols=34  Identities=12%  Similarity=0.054  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++|+||||+|++|..++..|+... ...++.++++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~-~~~el~L~Di   34 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRD-IADEVVFVDI   34 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CCSEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-CCCEEEEEcC
Confidence            579999999999999999988862 2346888887

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.50  E-value=0.00024  Score=43.09  Aligned_cols=36  Identities=11%  Similarity=0.067  Sum_probs=31.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~---G~~V~~~~~~~  180 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLK---GCKVVGAAGSD  180 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999998886   56899988763

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=97.49  E-value=0.00019  Score=52.46  Aligned_cols=35  Identities=20%  Similarity=0.403  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCCh-HHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         11 YRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        11 ~~~~~ilitGa~G~-iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +++++++||||++. ||.++++.|++.   +.+|+++++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~---GA~Vvl~~~  708 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQG---GAKVVVTTS  708 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHT---TCEEEEEES
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHC---CCEEEEEec
Confidence            56889999999998 999999999997   678888853

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.45  E-value=0.00022  Score=53.98  Aligned_cols=38  Identities=16%  Similarity=0.195  Sum_probs=34.7

Q ss_pred             ccCCeEEEEcCCCh-HHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGF-MGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~-iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++. ||..+++.|++.   |.+|++.+|+..
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~---GA~Vvi~~r~~~ 2172 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDG---GATVIATTSRLD 2172 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHT---TCEEEEEESCCS
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            78999999999999 999999999998   789999998754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.45  E-value=0.00022  Score=44.01  Aligned_cols=34  Identities=24%  Similarity=0.357  Sum_probs=27.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.|+|+|.|| |++|+.+++.|.+.    +.|.+.+++.
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~~~----~~v~~~~~~~   48 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLKDE----FDVYIGDVNN   48 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTT----SEEEEEESCH
T ss_pred             CccEEEEECC-CHHHHHHHHHHhcC----CCeEEEEcCH
Confidence            4578999998 99999999998764    5788888753

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.44  E-value=0.00023  Score=43.53  Aligned_cols=36  Identities=22%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|+||+|++|..++..|+.. +-.++|.++++++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~-~~~~ev~L~Di~~   36 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAH   36 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSS
T ss_pred             CEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEeCCc
Confidence            47999999999999999998875 2236899999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.42  E-value=0.00027  Score=42.71  Aligned_cols=36  Identities=17%  Similarity=0.059  Sum_probs=31.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~---G~~V~~~~~~~  175 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKAL---GAKLIGTVGTA  175 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHH---TCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4689999999999999999999887   57899988864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.40  E-value=0.00015  Score=41.65  Aligned_cols=34  Identities=18%  Similarity=0.352  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|+|+ |.+|+++++.|.+.   ++.|+++++++.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~---g~~v~vid~~~~   34 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSR---KYGVVIINKDRE   34 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHT---TCCEEEEESCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            57999996 99999999999987   679999998643

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.37  E-value=0.00038  Score=41.51  Aligned_cols=37  Identities=24%  Similarity=0.164  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|++.   +.+|++.+|+.+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~---G~~V~v~~R~~~  153 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSL---DCAVTITNRTVS  153 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHc---CCEEEEEECCHH
Confidence            46789999998 78999999999997   578999988743

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.35  E-value=0.00029  Score=42.74  Aligned_cols=36  Identities=14%  Similarity=0.186  Sum_probs=31.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~---G~~Vi~~~~~~  180 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHL---GATVIGTVSTE  180 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999998886   57899998864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.34  E-value=0.0004  Score=42.20  Aligned_cols=36  Identities=14%  Similarity=0.077  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~---G~~V~~~~~~~  190 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMM---GCYVVGSAGSK  190 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999988876   56899988763

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=0.00054  Score=42.04  Aligned_cols=36  Identities=17%  Similarity=0.044  Sum_probs=31.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~---Ga~Vi~~~~~~  205 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAY---GLKILGTAGTE  205 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHC---CCEEEEEeCCh
Confidence            4679999999999999999998876   56899988764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.31  E-value=0.00056  Score=51.04  Aligned_cols=38  Identities=21%  Similarity=0.202  Sum_probs=32.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEeCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKG   52 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r~~~~   52 (67)
                      .+++++||||+|.||..+++.|.++   +.+ |++++|+...
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~---Ga~~vvl~~R~~~~ 1921 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLR---GAQKLVLTSRSGIR 1921 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT---TCCEEEEECSSCCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHC---CCCEEEEEeCCCcc
Confidence            5789999999999999999999997   554 8888887653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.31  E-value=0.00045  Score=41.90  Aligned_cols=36  Identities=8%  Similarity=0.099  Sum_probs=31.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~  184 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLK---GCRVVGIAGGA  184 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4689999999999999999888876   57999998764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.31  E-value=0.00037  Score=43.27  Aligned_cols=41  Identities=7%  Similarity=0.161  Sum_probs=33.3

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++.+++|.|+|++|++|+.++..++..+ ...+|.++|...
T Consensus         4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g-~~~evvLiDi~~   44 (343)
T 3fi9_A            4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMR-LTPNLCLYDPFA   44 (343)
T ss_dssp             CCSCSSEEEEETTTSHHHHHHHHHHHHTT-CCSCEEEECSCH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhcC-CCCEEEEEeCCc
Confidence            45677899999999999999999888863 225899998753

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.30  E-value=0.00082  Score=41.33  Aligned_cols=37  Identities=14%  Similarity=0.108  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|+ |.+|+.++..|.+.+  ..+|++++|++
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~G--a~~V~i~nR~~  188 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDG--VKEISIFNRKD  188 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSS
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCC--CCEEEEEECCC
Confidence            56889999997 899999999999872  24899999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.29  E-value=0.00032  Score=42.01  Aligned_cols=37  Identities=11%  Similarity=0.116  Sum_probs=31.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|++|.+|...++.+...   +.+|+++++++.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~---Ga~Vi~~~~~~~  161 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAM---GLRVLAAASRPE  161 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            4679999999999999999988776   568999998654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.27  E-value=0.00052  Score=42.08  Aligned_cols=36  Identities=11%  Similarity=0.091  Sum_probs=31.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|..+++.+...   +.+|+++++++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~---Ga~Vi~~~~~~  197 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMA---GAIPLVTAGSQ  197 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999999998886   57899988764

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.27  E-value=0.00085  Score=41.79  Aligned_cols=37  Identities=24%  Similarity=0.418  Sum_probs=28.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++.++|.|.||+|++|+.+++.|.++ +. .++..+.+.
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~-p~-~elvai~~~   50 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANH-PH-FQVTLMTAD   50 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTC-SS-EEEEEEBCS
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcC-CC-cEEEEEeCc
Confidence            34468999999999999999999886 33 366666543

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.26  E-value=0.00035  Score=42.69  Aligned_cols=37  Identities=19%  Similarity=0.207  Sum_probs=31.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~---Ga~Vi~~~~~~~  195 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGM---GAKVIAVVNRTA  195 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            4679999999999999999988876   578999988654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.26  E-value=0.00039  Score=44.65  Aligned_cols=38  Identities=21%  Similarity=0.255  Sum_probs=30.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+|+|+ |++|+.++..|++..  +.+|++.+|+.
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~--g~~V~v~~R~~   57 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAAND--DINVTVACRTL   57 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTST--TEEEEEEESSH
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCC--CCeEEEEECCH
Confidence            356789999997 999999999999862  35899999864

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.25  E-value=0.00049  Score=42.86  Aligned_cols=35  Identities=23%  Similarity=0.378  Sum_probs=27.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCC----cceEEEEEe
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPD----IGAIYIMVR   48 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~----~~~v~~~~r   48 (67)
                      .++|.|.||+|++|+.+++.|+++ +.    ..+|+.+.+
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~s   47 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALTA   47 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEEC
Confidence            368999999999999999999876 20    136677654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.23  E-value=0.00058  Score=41.78  Aligned_cols=36  Identities=11%  Similarity=0.014  Sum_probs=31.1

Q ss_pred             cC--CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         12 RD--GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        12 ~~--~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      .+  ++++|+||+|.+|..+++.+...   +. +|+++++++
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~---Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFL---GCSRVVGICGTH  196 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHT---TCSEEEEEESCH
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHC---CCCeEEEEeCCH
Confidence            46  89999999999999999998876   56 899988863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.20  E-value=0.0007  Score=41.21  Aligned_cols=37  Identities=19%  Similarity=0.204  Sum_probs=32.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|++|.+|...++.+...   +.+|+++++++.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~~  180 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQIL---NFRLIAVTRNNK  180 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESSST
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            4679999999999999999888877   579999998765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.11  E-value=0.00083  Score=40.91  Aligned_cols=36  Identities=8%  Similarity=-0.045  Sum_probs=31.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+|++|.+|..+++.+...   +.+|+++++++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~---G~~Vi~~~~~~  201 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLF---GARVIATAGSE  201 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999998876   56899988864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.10  E-value=0.0009  Score=42.05  Aligned_cols=36  Identities=19%  Similarity=0.352  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      ++|+|+|| |++|+.+++.|.+.. .. ..|++.+|+..
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~   38 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLS   38 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHH
Confidence            47999999 999999999999862 22 48889888743

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.10  E-value=0.00098  Score=41.28  Aligned_cols=34  Identities=15%  Similarity=0.300  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.||+|++|+.+++.|.++ +. .+++.+.+.
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~-p~-~elv~v~s~   38 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSH-PY-LEVKQVTSR   38 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTC-TT-EEEEEEBCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEECc
Confidence            58999999999999999999876 33 366666553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.08  E-value=0.0008  Score=40.16  Aligned_cols=37  Identities=22%  Similarity=0.234  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|++.   +.+|++.+|+.+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~---G~~v~v~~R~~~  153 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQA---QQNIVLANRTFS  153 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHT---TCEEEEEESSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            46789999998 78999999999997   579999999753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.08  E-value=0.0013  Score=40.74  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|..+++.+...   +.+|++++|++.
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~---Ga~V~~~d~~~~  200 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGM---GAQVTILDVNHK  200 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence            56789999999 99999999999887   579999998743

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.06  E-value=0.0011  Score=39.42  Aligned_cols=34  Identities=18%  Similarity=0.219  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|.|.|++|.+|..++..|.+.   +++|++.+|++
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~---g~~V~~~~r~~   45 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDS---AHHLAAIEIAP   45 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHS---SSEEEEECCSH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEECCH
Confidence            58999999999999999999987   57899888864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.05  E-value=0.0012  Score=39.95  Aligned_cols=36  Identities=17%  Similarity=0.043  Sum_probs=31.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~  175 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKAL---GAKLIGTVSSP  175 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESSH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999998887   56899988764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.04  E-value=0.0012  Score=40.03  Aligned_cols=36  Identities=14%  Similarity=0.143  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~~~~~  183 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMK---GAHTIAVASTD  183 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            4679999999999999999988876   56899988853

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.04  E-value=0.0012  Score=40.41  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=31.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~---Ga~Vi~~~~~~  202 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAF---GAEVYATAGST  202 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999999999999998876   57899998764

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.02  E-value=0.0016  Score=40.30  Aligned_cols=34  Identities=21%  Similarity=0.262  Sum_probs=25.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      ++|+|.||+|++|+.+++.|.++.-...+++.+.
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            5799999999999999999985421123555554

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.01  E-value=0.0013  Score=40.79  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=27.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.||+|++|+.+++.|.++ +. .+|..+.++
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~-p~-~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADH-PM-FELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTC-SS-EEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcC-CC-CEEEEEEcc
Confidence            48999999999999999998876 33 478777653

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.01  E-value=0.00099  Score=41.00  Aligned_cols=36  Identities=14%  Similarity=0.181  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~---Ga~Vi~~~~~~  198 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKA---KCHVIGTCSSD  198 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhC---CCEEEEEECCH
Confidence            4679999999999999999988876   56899988763

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.00  E-value=0.0011  Score=35.65  Aligned_cols=34  Identities=29%  Similarity=0.397  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|.|. |.+|..+++.|.+.   ++.|+++++++.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~---g~~v~vid~~~~   41 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLAS---DIPLVVIETSRT   41 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHT---TCCEEEEESCHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence            46888886 99999999999987   689999998753

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.99  E-value=0.0017  Score=39.78  Aligned_cols=37  Identities=19%  Similarity=0.207  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|+||+|.+|..++..|..+.+-..++.+++..+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~   37 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC
Confidence            5799999999999999988877522346899999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.98  E-value=0.0015  Score=40.14  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++|+|+ |.+|...++.+...   +.+|+++++++
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~Vi~~~~~~  214 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTY---GLEVWMANRRE  214 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHH---TCEEEEEESSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEeCCc
Confidence            889999999 99999999998887   56999999875

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.96  E-value=0.0015  Score=37.67  Aligned_cols=34  Identities=18%  Similarity=0.224  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|.|+| +|.+|+.++..|.+.   +++|++.+|++
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~---g~~V~~~~r~~   61 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGS---GFKVVVGSRNP   61 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHT---TCCEEEEESSH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHC---CCEEEEEeCCH
Confidence            46899998 899999999999987   57899988864

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.94  E-value=0.00057  Score=42.22  Aligned_cols=37  Identities=19%  Similarity=0.235  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcce-----EEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGA-----IYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-----v~~~~r~~   50 (67)
                      .++|+||||+|+||++++..|+... -..+     +.+++..+
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~-~~~e~~~~~l~L~Di~~   44 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGS-VFGKDQPIILVLLDITP   44 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTT-TTCTTCCEEEEEECCGG
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCC-CccccCCCEEEEEeCCC
Confidence            3689999999999999999998752 1123     88888753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.90  E-value=0.0015  Score=39.17  Aligned_cols=36  Identities=19%  Similarity=0.226  Sum_probs=30.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+. .+|+.++..|++.   + +|++.+|+.+
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~---G-~V~v~~r~~~  161 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKD---N-NIIIANRTVE  161 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSS---S-EEEEECSSHH
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHC---C-CEEEEECCHH
Confidence            467899999985 9999999999987   6 8999888643

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.90  E-value=0.001  Score=43.04  Aligned_cols=36  Identities=22%  Similarity=0.194  Sum_probs=27.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|+|| |.+|+.++..|.+.   +.+|++++|+.
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~---G~~V~i~~R~~  397 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEK---GAKVVIANRTY  397 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHH---CC-CEEEESSH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            46788999999 69999999999998   45888888874

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.89  E-value=0.0029  Score=39.03  Aligned_cols=34  Identities=18%  Similarity=0.441  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~   47 (67)
                      .++|.|.||+|++|+.+++.|.++. |. .+++.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~-~elv~i~   37 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPV-DELFLLA   37 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCE-EEEEEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCC-EEEEEEE
Confidence            3589999999999999999988862 32 4666665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.89  E-value=0.0025  Score=39.14  Aligned_cols=38  Identities=16%  Similarity=0.163  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |..|+.++..|.+.+  ..+|++..|+++
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G--~~~v~v~nRt~~  183 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEG--IKEIKLFNRKDD  183 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSST
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEECCCc
Confidence            46789999997 889999999999872  348999999843

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.88  E-value=0.0015  Score=39.48  Aligned_cols=34  Identities=24%  Similarity=0.342  Sum_probs=29.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+||+|.+|...++.+...   +.+|+++++++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~  186 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKR---GYDVVASTGNRE  186 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHH---TCCEEEEESSSS
T ss_pred             eEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            7999999999999999988877   568999888754

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.86  E-value=0.0024  Score=38.60  Aligned_cols=38  Identities=13%  Similarity=0.173  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|.+.+  ..+|++++|+.+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G--~~~v~i~~R~~~  162 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHG--VQKLQVADLDTS  162 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTT--CSEEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEECCHH
Confidence            56889999998 899999999999972  347999998754

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.86  E-value=0.0026  Score=39.45  Aligned_cols=34  Identities=24%  Similarity=0.402  Sum_probs=26.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.|.||+|++|..+++.|.+. |+ .++..+..+
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~-p~-~el~~l~s~   38 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRH-PH-MNITALTVS   38 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC-TT-EEEEEEEEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhC-CC-CcEEEEEec
Confidence            58999999999999999988875 44 366665543

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=96.80  E-value=0.0029  Score=37.24  Aligned_cols=34  Identities=24%  Similarity=0.278  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|.|+ |.+|..++..|.+.   +++|++++|++.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~---g~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQ---GHEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhC---CCCEEEEEcCcc
Confidence            47899987 99999999999987   679999998764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.80  E-value=0.0018  Score=38.97  Aligned_cols=35  Identities=31%  Similarity=0.385  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.||.|.+|..++..|.+.   +++|++++|++.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~---G~~V~~~~~~~~   56 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRAS---GYPISILDREDW   56 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTT---TCCEEEECTTCG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhC---CCeEEEEECCcc
Confidence            47999999999999999999887   578999888653

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.78  E-value=0.0022  Score=40.02  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+|.|.||||++|..+++.|.++ |.. ++..+..+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~   41 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGK   41 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEES
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECc
Confidence            458999999999999999977765 443 66655543

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.78  E-value=0.0022  Score=40.02  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+|.|.||||++|..+++.|.++ |.. ++..+..+
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~h-P~~-el~~l~S~   41 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNH-PYI-KPAYLAGK   41 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTC-SSE-EEEEEEES
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhC-CCc-eEEEEECc
Confidence            458999999999999999977765 443 66655543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.78  E-value=0.0016  Score=39.71  Aligned_cols=36  Identities=19%  Similarity=0.208  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|+||+|.+|...++.+...   +.+|+++++++.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~~~~~~  200 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEE---GFRPIVTVRRDE  200 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHH---TCEEEEEESCGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            378999999999999999988887   568999987654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.75  E-value=0.0036  Score=38.58  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=32.4

Q ss_pred             ccCCe-EEEE-cCC-----------------ChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQ-ILVT-GGT-----------------GFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~-ilit-Ga~-----------------G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++ |+|| |+|                 |-.|.+++++++.+   |+.|+.+.++..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~---Ga~V~lv~g~~s   90 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAA---GYGVLFLYRARS   90 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHT---TCEEEEEEETTS
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHC---CCEEEEEecCCC
Confidence            56777 9998 666                 99999999999998   789999998644

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.74  E-value=0.0039  Score=37.60  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|.|+ |..|+.++..|.+.   +.+|++.+|+.+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~---G~~v~V~nRt~~  152 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQ---GLQVSVLNRSSR  152 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            789999986 89999999999997   479999999866

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.73  E-value=0.0024  Score=38.54  Aligned_cols=37  Identities=30%  Similarity=0.550  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|.|+|++|.+|+.+++.+.+. ++..-|-+++|+.
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~   43 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG   43 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence            468999999999999999999885 3433344467764

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.73  E-value=0.0038  Score=37.68  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|.+.+  ..+|++.+|+.+
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G--~~~v~v~~R~~~  161 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQ--PASITVTNRTFA  161 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTC--CSEEEEEESSHH
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcC--CCeEEEEECCHH
Confidence            46789999997 789999999999871  258999999754

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.72  E-value=0.0035  Score=38.21  Aligned_cols=36  Identities=11%  Similarity=0.114  Sum_probs=30.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~---Ga~Vi~~~~~~  185 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAY---GLRVITTASRN  185 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEECCSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            5789999999999999999988876   56899988754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.71  E-value=0.0039  Score=38.21  Aligned_cols=36  Identities=14%  Similarity=0.146  Sum_probs=30.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|+++++++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~---Ga~Vi~~~~~~~  214 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAM---GAETYVISRSSR  214 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEESSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEcCCHH
Confidence            4679999999 99999999988776   568999998765

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.71  E-value=0.0037  Score=35.83  Aligned_cols=36  Identities=14%  Similarity=0.180  Sum_probs=29.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...++|.|.| .|.+|..++..|.+.   +++|++.+|++
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~---g~~V~~~~~~~   52 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIA---GHEVTYYGSKD   52 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECTTC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            4567899998 799999999999987   57899998865

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.71  E-value=0.001  Score=38.43  Aligned_cols=35  Identities=9%  Similarity=0.035  Sum_probs=28.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++++|.|+ |.+|+.+++.|.+.   ++ |+++++++.
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~---g~-v~vid~~~~   42 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGS---EV-FVLAEDENV   42 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTS---EE-EEEESCGGG
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhC---Ce-EEEEECCHH
Confidence            3467999987 99999999999886   67 888887654

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.68  E-value=0.0045  Score=38.82  Aligned_cols=33  Identities=33%  Similarity=0.451  Sum_probs=24.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~   47 (67)
                      ++|.|.||||++|..+++.|.++. | ..++..+.
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p-~~el~~~a   36 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLP-IDKIRYLA   36 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCC-EEEEEEEE
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCC-cEEEEEEE
Confidence            479999999999999999877751 2 23555554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.67  E-value=0.0032  Score=39.65  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=30.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -.+.+++|+||+|.+|...++.+...   +.+|+++++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~---Ga~vi~~~~~~  255 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNG---GGIPVAVVSSA  255 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            34679999999999999999888876   57888887653

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.66  E-value=0.0014  Score=35.36  Aligned_cols=35  Identities=14%  Similarity=0.236  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++|.|+ |.+|+.+++.|...   +.+|++.+|++.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~---g~~v~v~~r~~~   55 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYP---QYKVTVAGRNID   55 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTT---TCEEEEEESCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEcCCHH
Confidence            789999996 99999999998875   456888888743

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.63  E-value=0.0018  Score=39.07  Aligned_cols=34  Identities=26%  Similarity=0.309  Sum_probs=29.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+|++|.+|...++.+...   +.+|+++++++.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~---Ga~vi~~~~~~~  185 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKR---GYTVEASTGKAA  185 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            7999999999999999888776   568999888754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.62  E-value=0.0045  Score=37.22  Aligned_cols=38  Identities=21%  Similarity=0.233  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|.+.+  ..+|++.+|+.+
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G--~~~v~i~~R~~~  155 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAG--PSELVIANRDMA  155 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTC--CSEEEEECSCHH
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence            46789999997 789999999999972  258999988753

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.62  E-value=0.0036  Score=38.74  Aligned_cols=33  Identities=18%  Similarity=0.357  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .++|.|.||+|++|+.+++.|.+. |. .+|..+.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~-p~-~elvai~   36 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKH-PY-LELVKVS   36 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTC-SS-EEEEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhC-CC-cEEEEEe
Confidence            358999999999999999998876 43 4676664

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.62  E-value=0.0042  Score=37.60  Aligned_cols=36  Identities=25%  Similarity=0.230  Sum_probs=30.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      +++++++|+|+ |.+|+.++..|.+.   +. +|++.+|+.
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~---G~~~V~v~nR~~  175 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLST---AAERIDMANRTV  175 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTT---TCSEEEEECSSH
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHC---CCCEEEEEeCCH
Confidence            46789999997 78999999999987   44 899999874

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.58  E-value=0.0036  Score=34.81  Aligned_cols=37  Identities=19%  Similarity=0.174  Sum_probs=29.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++|+| .|.+|..+++.|.+..  +++|+++++++
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~--g~~V~vid~~~   73 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARY--GKISLGIEIRE   73 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHH--CSCEEEEESCH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhcc--CCeEEEEECCH
Confidence            3456899998 5999999999998751  36899998864

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.58  E-value=0.0015  Score=39.42  Aligned_cols=38  Identities=21%  Similarity=0.278  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.++..|.+.+  ..+|++.+|+.+
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G--~~~v~v~~R~~~  152 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIV--RPTLTVANRTMS  152 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTC--CSCCEEECSCGG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCHH
Confidence            46789999997 888999999999872  238999999754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=96.57  E-value=0.0087  Score=38.08  Aligned_cols=38  Identities=16%  Similarity=-0.069  Sum_probs=30.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHH-hhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~-~~~~~~~~v~~~~r~~~   51 (67)
                      ..+|++|||||+..+|.+....|. ..   +..++.+.+...
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~---GA~vi~v~~~~~   86 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGY---GAATIGVSFEKA   86 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHH---CCEEEEEECCCC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhC---CCCEEEEecCCc
Confidence            346899999999999999988887 44   567887777543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.57  E-value=0.0059  Score=38.06  Aligned_cols=37  Identities=11%  Similarity=0.074  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|+|+ |-+|..+++.+...   +.+|++.+|++.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~---Ga~V~~~d~~~~  202 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGM---GATVTVLDINID  202 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence            56789999998 99999999999887   568999998643

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=96.54  E-value=0.0095  Score=37.20  Aligned_cols=33  Identities=24%  Similarity=0.373  Sum_probs=27.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+|.|.||||++|..+++.|.++ |. .+|..+..
T Consensus        14 ~~V~IvGAtG~vG~ellrlL~~h-P~-~el~~l~S   46 (351)
T 1vkn_A           14 IRAGIIGATGYTGLELVRLLKNH-PE-AKITYLSS   46 (351)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHC-TT-EEEEEEEC
T ss_pred             eEEEEECCCCHHHHHHHHHHHcC-CC-cEEEEEeC
Confidence            47999999999999999999987 44 46666654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.53  E-value=0.0065  Score=37.61  Aligned_cols=37  Identities=16%  Similarity=0.316  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |.+|+.+++.+...   +.+|++++|++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~---Ga~V~v~dr~~~  201 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGL---GAQVQIFDINVE  201 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEeCCHH
Confidence            45689999999 99999999999887   568999998753

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.53  E-value=0.0072  Score=37.58  Aligned_cols=33  Identities=24%  Similarity=0.322  Sum_probs=25.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~   47 (67)
                      ++|.|.||||++|..+++.|.++. |. .++..+.
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~-~el~~~~   35 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPA-SAVRFFA   35 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCE-EEEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCc-eEEEEEE
Confidence            579999999999999999877752 22 3555554

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.52  E-value=0.0018  Score=38.95  Aligned_cols=37  Identities=22%  Similarity=0.280  Sum_probs=28.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEE-EEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIY-IMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~-~~~r~~   50 (67)
                      +.++|.|+|++|.+|+.+++.+.+. + +.++. ++++++
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~-~-~~elva~~d~~~   41 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALAL-E-GVQLGAALEREG   41 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHS-T-TEECCCEECCTT
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhC-C-CCEEEEEEecCc
Confidence            3468999999999999999998875 2 35665 455543

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.51  E-value=0.0052  Score=37.25  Aligned_cols=34  Identities=18%  Similarity=0.034  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .|+|.|.|+ |.+|..++..|.+.   +++|++++|++
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~---g~~V~~~~r~~   37 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALK---GQSVLAWDIDA   37 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhC---CCEEEEEeCCH
Confidence            368999986 99999999999886   57899998864

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.50  E-value=0.0067  Score=38.23  Aligned_cols=33  Identities=27%  Similarity=0.287  Sum_probs=25.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   46 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~   46 (67)
                      +..+|.|.||||++|..+++.|.++ |. .+|..+
T Consensus        18 ~~~kVaIvGAtG~vG~ell~lL~~h-p~-~el~~l   50 (381)
T 3hsk_A           18 SVKKAGVLGATGSVGQRFILLLSKH-PE-FEIHAL   50 (381)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTC-SS-EEEEEE
T ss_pred             CccEEEEECCCChHHHHHHHHHHcC-CC-ceEEEe
Confidence            3457999999999999999987775 43 366554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.50  E-value=0.0064  Score=37.44  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=28.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~---Ga~Vi~~~~  216 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAW---DAHVTAVCS  216 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEeC
Confidence            4679999999999999999888776   568888774

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.50  E-value=0.0037  Score=37.54  Aligned_cols=36  Identities=14%  Similarity=0.165  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .++|.|+| .|.+|..++..|.+.   +++|++.+|++..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~---G~~V~~~dr~~~~   50 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEW---PGGVTVYDIRIEA   50 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTS---TTCEEEECSSTTT
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHC---CCeEEEEeCCHHH
Confidence            46799996 799999999999987   6899999998763

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.46  E-value=0.0028  Score=38.13  Aligned_cols=34  Identities=18%  Similarity=0.234  Sum_probs=29.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+||+|.+|...++.+...   +.+|+++++++.
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~---Ga~Vi~~~~~~~  182 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKL---GYQVAAVSGRES  182 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCGG
T ss_pred             eEEEECCCcHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            4999999999999999888876   568999988654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.46  E-value=0.0073  Score=36.82  Aligned_cols=34  Identities=21%  Similarity=0.374  Sum_probs=28.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++|+||+|.+|...++.+...   +.+|+++ ++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~---Ga~Vi~~-~~  183 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALAR---GARVFAT-AR  183 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEE-EC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEE-eC
Confidence            4679999999999999999988876   5688887 54

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.45  E-value=0.0062  Score=36.65  Aligned_cols=34  Identities=21%  Similarity=0.120  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~   50 (67)
                      .++|.|+|+ |.+|..++..|...   ++  +|++++|++
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~---g~~~~V~l~d~~~   42 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQR---GIAREIVLEDIAK   42 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCCSEEEEECSSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCCh
Confidence            468999998 99999999999886   45  899999874

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.45  E-value=0.0079  Score=35.16  Aligned_cols=38  Identities=29%  Similarity=0.419  Sum_probs=30.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+..++|.|+ |.|.+|..++..|.+.   +++|++.+|+++
T Consensus        16 ~~~~~kIgiI-G~G~mG~alA~~L~~~---G~~V~~~~r~~~   53 (245)
T 3dtt_A           16 YFQGMKIAVL-GTGTVGRTMAGALADL---GHEVTIGTRDPK   53 (245)
T ss_dssp             ---CCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             ccCCCeEEEE-CCCHHHHHHHHHHHHC---CCEEEEEeCChh
Confidence            4567899999 5999999999999997   689999998754

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.44  E-value=0.0019  Score=40.86  Aligned_cols=36  Identities=17%  Similarity=0.215  Sum_probs=29.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+|+|+||+|.+|...++.+...   +.+|+++++++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~~~~  263 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAG---GANPICVVSSP  263 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHc---CCeEEEEECCH
Confidence            4678999999999999999888776   56888887643

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.43  E-value=0.0073  Score=36.65  Aligned_cols=35  Identities=14%  Similarity=0.125  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      .++|.|+|+ |.+|..++..|+..   +. .|+++++++.
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~---g~~~V~l~D~~~~   39 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKD---NLADVVLFDIAEG   39 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH---TCCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCceEEEEeCCch
Confidence            468999998 99999999999987   45 7999998754

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.36  E-value=0.0093  Score=36.55  Aligned_cols=37  Identities=11%  Similarity=0.153  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|.|.|. |.+|+.+++.+...   +.+|++.+|++.
T Consensus       153 l~g~~vgIIG~-G~iG~~iA~~l~~~---G~~V~~~d~~~~  189 (330)
T 2gcg_A          153 LTQSTVGIIGL-GRIGQAIARRLKPF---GVQRFLYTGRQP  189 (330)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGG---TCCEEEEESSSC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHC---CCEEEEECCCCc
Confidence            56789999976 99999999999887   678999998754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.35  E-value=0.0089  Score=36.54  Aligned_cols=37  Identities=19%  Similarity=0.121  Sum_probs=30.3

Q ss_pred             cC-CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RD-GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~-~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+ .+|+|+||+|.+|...++.+...   +.++++++++.+
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~  203 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLL---NFNSISVIRDRP  203 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHH---TCEEEEEECCCT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHC---CCEEEEEecCcc
Confidence            46 89999999999999999888776   567888876544

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.34  E-value=0.0026  Score=36.66  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEE-EEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYI-MVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~-~~r~~~   51 (67)
                      .++|.|.| +|.+|..++..|.+.   +++|++ .+|+++
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~---g~~V~~v~~r~~~   58 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAA---QIPAIIANSRGPA   58 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHT---TCCEEEECTTCGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhC---CCEEEEEECCCHH
Confidence            46899998 899999999999987   578887 777654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.32  E-value=0.0076  Score=35.75  Aligned_cols=33  Identities=21%  Similarity=0.183  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.|+ |.+|..++..|.+.   +++|++++|++
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~---g~~V~~~~r~~   36 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQG---GNDVTLIDQWP   36 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhC---CCcEEEEECCH
Confidence            58999985 99999999999987   67999998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.31  E-value=0.011  Score=35.97  Aligned_cols=37  Identities=16%  Similarity=0.127  Sum_probs=30.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+|++|.+|..+++.+....  +.+|+++++++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~--Ga~Vi~~~~~~  206 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVS--GATIIGVDVRE  206 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHT--CCEEEEEESSH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcC--CCeEEEEcCCH
Confidence            46799999999999999999888751  35898888764

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.30  E-value=0.0096  Score=36.56  Aligned_cols=35  Identities=11%  Similarity=0.047  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      .++|.|+|| |.+|..++..|...   ++ .|.+++++++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~---g~~~V~L~D~~~~   44 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALR---ELADVVLYDVVKG   44 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHH---TCCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCCeEEEEECChh
Confidence            468999998 99999999999887   44 7999998754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.28  E-value=0.0073  Score=36.71  Aligned_cols=35  Identities=9%  Similarity=-0.013  Sum_probs=29.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+|+ |.+|...++.+...   +.+|+++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~---Ga~Vi~~~~~~  198 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAM---GLNVVAVDIGD  198 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            4679999999 77999999988876   56899988753

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.28  E-value=0.0097  Score=35.72  Aligned_cols=35  Identities=17%  Similarity=0.243  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|++++ ++.
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~---Ga~Vi~~~-~~~  176 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNA---GYVVDLVS-ASL  176 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEC-SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEE-Chh
Confidence            4679999999 99999999988877   56899888 543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.27  E-value=0.012  Score=35.45  Aligned_cols=36  Identities=17%  Similarity=0.165  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|.|+ |-+|+.+++.+...   +.+|++.+|++
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~---G~~V~~~d~~~  190 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAAL---GANVKVGARSS  190 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            56889999985 99999999999887   57999999875

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.27  E-value=0.011  Score=32.11  Aligned_cols=39  Identities=13%  Similarity=0.156  Sum_probs=29.1

Q ss_pred             hhccCCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++.++|.|.|++   |.+|..++++|++.   +++|+.++++.
T Consensus        10 ~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~---G~~V~~vnp~~   51 (138)
T 1y81_A           10 NSKEFRKIALVGASKNPAKYGNIILKDLLSK---GFEVLPVNPNY   51 (138)
T ss_dssp             ----CCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTTC
T ss_pred             cccCCCeEEEEeecCCCCCHHHHHHHHHHHC---CCEEEEeCCCC
Confidence            45667899999997   88999999999886   56777776643

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.26  E-value=0.0099  Score=36.26  Aligned_cols=37  Identities=11%  Similarity=0.259  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+++.+|+.++..|+..   +..|++..+..
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~---gAtVtv~h~~t  194 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNA---GATVSVCHIKT  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHT---TCEEEEECTTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCc
Confidence            67899999999999999999999987   56888877654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.26  E-value=0.0065  Score=35.89  Aligned_cols=38  Identities=21%  Similarity=0.309  Sum_probs=31.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++++|+|.|+ |.+|+++++.|...+  ..+|++++++.
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~   65 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDT   65 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCB
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCC
Confidence            356789999985 778999999999982  45899999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.25  E-value=0.0073  Score=36.79  Aligned_cols=36  Identities=14%  Similarity=0.285  Sum_probs=29.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|+++++++.
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~---Ga~Vi~~~~~~~  211 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAM---GAEVSVFARNEH  211 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHT---TCEEEEECSSST
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            4679999997 99999999888776   568999888765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.24  E-value=0.0067  Score=36.95  Aligned_cols=35  Identities=23%  Similarity=0.263  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      .+.+++|+|+ |.+|...++.+...   +. +|+++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~~Vi~~~~~~  202 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKAS---GAYPVIVSEPSD  202 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHT---TCCSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCH
Confidence            5789999999 99999999988876   55 899988763

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.23  E-value=0.0083  Score=37.67  Aligned_cols=33  Identities=12%  Similarity=0.158  Sum_probs=23.7

Q ss_pred             CeEEEEcCCChHHHHHHH-HHHhhCCC-cceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLID-KLLRSFPD-IGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~-~l~~~~~~-~~~v~~~~   47 (67)
                      ++|.|.||||++|..+++ .|.++ |- ..++..++
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~h-p~~~~~l~~~s   35 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEER-DFDLIEPVFFS   35 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTT-GGGGSEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcC-CCCceEEEEEe
Confidence            478999999999999999 55554 31 13555554

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.23  E-value=0.012  Score=35.77  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|+ |.+|..++..|... +.+++|+++++++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~-~~g~~V~l~D~~~~   36 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEK-QLARELVLLDVVEG   36 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC-CCCCEEEEEeCChh
Confidence            47999998 99999999998875 22579999999764

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.23  E-value=0.0069  Score=39.38  Aligned_cols=36  Identities=17%  Similarity=0.065  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|+|+. .||+.+++.|...   |.+|++.++++
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~---GA~Viv~D~~~  298 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQA---GARVIVTEIDP  298 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHC---CCEEEEEcCCH
Confidence            678999999976 9999999999987   67898887764

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.21  E-value=0.012  Score=36.31  Aligned_cols=37  Identities=14%  Similarity=0.128  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      ++.++|.|+|+ |.+|..++..|+..   +. +|+++++++.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~---~~~~v~L~Di~~~   42 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLK---ELGDVVLFDIAEG   42 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHT---TCCEEEEECSSSS
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhC---CCCeEEEEeCCch
Confidence            45678999998 99999999998886   34 8999998765

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.21  E-value=0.0088  Score=32.69  Aligned_cols=42  Identities=10%  Similarity=0.055  Sum_probs=33.5

Q ss_pred             chhhhcc-CCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          6 KVDDFYR-DGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         6 ~~~~~~~-~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+..++. .++|.|.|++   |-+|..+++.|++.   +++|+.++...
T Consensus         5 ~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~---G~~v~~vnp~~   50 (145)
T 2duw_A            5 DIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQ---GYHVIPVSPKV   50 (145)
T ss_dssp             SHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHH---TCCEEEECSSS
T ss_pred             HHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHC---CCEEEEeCCcc
Confidence            4556665 7889999998   88999999999987   46787776654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.20  E-value=0.0068  Score=35.53  Aligned_cols=36  Identities=22%  Similarity=0.299  Sum_probs=29.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r~~   50 (67)
                      +.+++|.|.|+ |.+|..++..|.+.   +++ |.+.+|++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~---g~~~v~~~~~~~   44 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRK---GFRIVQVYSRTE   44 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHH---TCCEEEEECSSH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHC---CCeEEEEEeCCH
Confidence            34578999986 99999999999987   456 78888764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.18  E-value=0.011  Score=35.18  Aligned_cols=35  Identities=14%  Similarity=0.034  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|.|.|+ |.+|+.++..|...   +++|++.++++.
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~---G~~V~l~d~~~~   38 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFH---GFAVTAYDINTD   38 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCeEEEEeCCHH
Confidence            468999965 99999999999987   689999998754

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=96.17  E-value=0.0097  Score=34.71  Aligned_cols=38  Identities=18%  Similarity=0.177  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~   51 (67)
                      .++|.|.|+ |.+|..++..|.+... ..++|++.+|++.
T Consensus         4 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~   42 (262)
T 2rcy_A            4 NIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKK   42 (262)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence            467999987 9999999999998720 0168999988764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.16  E-value=0.011  Score=37.15  Aligned_cols=37  Identities=30%  Similarity=0.415  Sum_probs=31.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      ..+++++|.|+ |.+|+.+++.+...   +. +|++.+|.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~---G~~~V~v~~r~~~  202 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDR---GVRAVLVANRTYE  202 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHH---CCSEEEEECSSHH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHC---CCCEEEEEeCCHH
Confidence            56889999998 99999999999987   44 8999988743

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.13  E-value=0.011  Score=35.56  Aligned_cols=36  Identities=17%  Similarity=0.246  Sum_probs=29.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      -.+.+++|+||+|.+|...++.+...   +.+|++++++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~---Ga~vi~~~~~  186 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQK---GTTVITTASK  186 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEECH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHc---CCEEEEEecc
Confidence            34679999999999999999988776   5688877643

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.12  E-value=0.0088  Score=36.84  Aligned_cols=23  Identities=26%  Similarity=0.437  Sum_probs=20.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      ++|.|.||+|++|+.+++.|.++
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~   23 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEAR   23 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC
Confidence            46899999999999999999854

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.11  E-value=0.011  Score=35.78  Aligned_cols=33  Identities=24%  Similarity=0.329  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~   50 (67)
                      ++|.|+|+ |.+|..++..|...   ++  +|+++++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~---g~~~eV~L~D~~~   35 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLR---GSCSELVLVDRDE   35 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCCH
Confidence            47999998 99999999998886   34  899999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.10  E-value=0.0048  Score=39.49  Aligned_cols=36  Identities=25%  Similarity=0.410  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..|+|+|.|+ |-+|+++++.|...   ++.|+++++++.
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~---~~~v~vId~d~~   37 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGE---NNDITIVDKDGD   37 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCST---TEEEEEEESCHH
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence            3578888866 88899999999886   689999998743

>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*

Probab=96.10  E-value=0.042  Score=32.34  Aligned_cols=40  Identities=18%  Similarity=0.177  Sum_probs=32.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   54 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~   54 (67)
                      .++++++|.| .|++|-.++..|.+.   +.+|+++.|......
T Consensus       150 ~~~~~vvViG-gG~ig~e~A~~l~~~---G~~Vt~v~~~~~~~~  189 (314)
T 4a5l_A          150 FRNKVLMVVG-GGDAAMEEALHLTKY---GSKVIILHRRDAFRA  189 (314)
T ss_dssp             GTTSEEEEEC-SSHHHHHHHHHHTTT---SSEEEEECSSSSCCS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHh---CCeeeeecccccccc
Confidence            4578888886 599999999999887   689999988655433

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.09  E-value=0.012  Score=36.60  Aligned_cols=37  Identities=19%  Similarity=0.277  Sum_probs=30.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++.++|.|+| .|.+|..++..|.+.   +++|++.+|++
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~---G~~V~v~dr~~   55 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKG---GHECVVYDLNV   55 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhC---CCEEEEEeCCH
Confidence            45678999996 799999999999997   68999999874

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.08  E-value=0.011  Score=32.09  Aligned_cols=41  Identities=10%  Similarity=0.035  Sum_probs=32.9

Q ss_pred             chhhhc-cCCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          6 KVDDFY-RDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         6 ~~~~~~-~~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+..++ +.++|.|.|++   |-+|..++++|++.   +++|+.++..
T Consensus         5 ~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~---G~~v~~vnp~   49 (140)
T 1iuk_A            5 ELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQ---GYRVLPVNPR   49 (140)
T ss_dssp             HHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHT---TCEEEEECGG
T ss_pred             HHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHC---CCEEEEeCCC
Confidence            456667 67899999998   88999999999887   5677776554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.08  E-value=0.013  Score=36.11  Aligned_cols=36  Identities=11%  Similarity=0.103  Sum_probs=29.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|+++++++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~Vi~~~~~~~  222 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAF---GSKVTVISTSPS  222 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            5789999996 99999999988776   568998887643

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.07  E-value=0.016  Score=35.63  Aligned_cols=37  Identities=19%  Similarity=0.184  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|.| .|.+|+.+++.+...   +.+|++.+|++.
T Consensus       148 l~g~~vgIIG-~G~iG~~iA~~l~~~---G~~V~~~d~~~~  184 (334)
T 2dbq_A          148 VYGKTIGIIG-LGRIGQAIAKRAKGF---NMRILYYSRTRK  184 (334)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhC---CCEEEEECCCcc
Confidence            5678999997 599999999999886   679999998765

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.07  E-value=0.011  Score=37.06  Aligned_cols=36  Identities=14%  Similarity=0.252  Sum_probs=25.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~   49 (67)
                      ++|.|.||+|++|+.+++.++...+ ..-.++.+..+
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~   38 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence            4799999999999999995555421 12356666553

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.07  E-value=0.013  Score=34.57  Aligned_cols=33  Identities=27%  Similarity=0.292  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.| .|.+|..++..|.+.   +++|++.+|++
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~---g~~V~~~~~~~   33 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRR---GHYLIGVSRQQ   33 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            4788998 799999999999987   57899888764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.06  E-value=0.011  Score=35.11  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|.| .|.+|..++..|.+.   +++|++.+|++.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~---G~~V~~~dr~~~   35 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKA---GCSVTIWNRSPE   35 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSSGG
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHC---CCeEEEEcCCHH
Confidence            5788996 599999999999997   689999998765

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.04  E-value=0.015  Score=35.36  Aligned_cols=37  Identities=14%  Similarity=0.235  Sum_probs=32.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+++++|.|+++.+|+.++..|+..   +..|++..+..
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~---gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNR---NYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHT---TCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHC---CCeEEEEeCCc
Confidence            78999999999999999999999997   57888887654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.04  E-value=0.017  Score=35.34  Aligned_cols=36  Identities=14%  Similarity=0.118  Sum_probs=28.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+|+|+||+|-+|...++.+...   +.+++++.+..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAAL---GLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHH---TCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHc---CCEEEEEecCc
Confidence            4679999999999999999888776   56677666543

>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}

Probab=96.03  E-value=0.042  Score=32.51  Aligned_cols=38  Identities=18%  Similarity=0.224  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      ..+++++|.|| |++|-.++..|.+.   +.+|+++.|.+.-
T Consensus       143 ~~~k~vvViGg-G~ig~E~A~~l~~~---g~~Vtlv~~~~~~  180 (312)
T 4gcm_A          143 FKNKRLFVIGG-GDSAVEEGTFLTKF---ADKVTIVHRRDEL  180 (312)
T ss_dssp             GTTCEEEEECC-SHHHHHHHHHHTTT---CSEEEEECSSSSC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhc---CCEEEEEeccccc
Confidence            45789999974 99999999998886   6799999887543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.03  E-value=0.0092  Score=36.35  Aligned_cols=38  Identities=29%  Similarity=0.464  Sum_probs=28.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ...+|.|.|++|.+|+.+++.+.+. ++..-|-+++|++
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~   57 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKG   57 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCC
Confidence            3458999999999999999998875 4443455556754

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.02  E-value=0.013  Score=36.89  Aligned_cols=34  Identities=12%  Similarity=0.123  Sum_probs=24.4

Q ss_pred             CCeEEEEcCCChHHHHHHH-HHHhhCCC-cceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLID-KLLRSFPD-IGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~-~l~~~~~~-~~~v~~~~   47 (67)
                      .++|.|.||||++|..+++ .|.++ |- ..++..++
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~h-p~~~~~l~~~s   39 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEG-DFDLIEPVFFS   39 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-GGGGSEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhC-CCCceEEEEEe
Confidence            3589999999999999999 55554 31 13555554

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.01  E-value=0.015  Score=35.16  Aligned_cols=38  Identities=21%  Similarity=0.439  Sum_probs=30.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|+|+ |..|+.++..|.+.+  ..+|++++|..+
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G--~~~v~v~nRt~~  157 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNF--AKDIYVVTRNPE  157 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTT--CSEEEEEESCHH
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEEeCCHH
Confidence            45789999987 677999999999872  348999998753

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.01  E-value=0.014  Score=35.79  Aligned_cols=37  Identities=14%  Similarity=0.256  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+++.+|+.++..|+..   +..|+++.|..
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~---gAtVtv~~~~T  199 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKE---NATVTIVHSGT  199 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHT---TCEEEEECTTS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHC---CCeEEEEeCCC
Confidence            67899999999999999999999997   57888887643

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.00  E-value=0.013  Score=35.63  Aligned_cols=33  Identities=24%  Similarity=0.122  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~   50 (67)
                      |+|.|+|+ |.+|..++..|+..   +.  +|+++++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~---g~~~~V~l~D~~~   35 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMK---GFAREMVLIDVDK   35 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHH---TCCSEEEEECSSH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCCCeEEEEeCCh
Confidence            47999998 99999999999887   45  899999874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.98  E-value=0.014  Score=34.74  Aligned_cols=36  Identities=25%  Similarity=0.425  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+ |.+|+.++..|.+.   +.+|++.+|++
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~---g~~V~v~~r~~  162 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKE---GAKVFLWNRTK  162 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHH---TCEEEEECSSH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHc---CCEEEEEECCH
Confidence            45789999985 88999999999997   35898888864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.96  E-value=0.02  Score=34.33  Aligned_cols=37  Identities=16%  Similarity=0.226  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++++|.| .|-+|+.+++.+...   +.+|++.+|.+.
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~---G~~V~~~dr~~~  189 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAAL---GAKVKVGARESD  189 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhC---CCEEEEEECCHH
Confidence            5688999998 599999999999887   568999998753

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.96  E-value=0.011  Score=35.91  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=29.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~   50 (67)
                      .+.+++|+|+ |.+|...++.+...   +. +|+++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~---Ga~~Vi~~~~~~  199 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRAS---GAGPILVSDPNP  199 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHT---TCCSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCCEEEEECCCH
Confidence            5789999999 99999999888776   55 899988753

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.95  E-value=0.015  Score=35.52  Aligned_cols=34  Identities=21%  Similarity=0.204  Sum_probs=27.6

Q ss_pred             CeEEEEcCCChHHHHH-HHHH-HhhCCCcce-EEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLL-IDKL-LRSFPDIGA-IYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l-~~~l-~~~~~~~~~-v~~~~r~~~   51 (67)
                      .+|+|+|+ |.+|... ++.+ ...   +.+ |+++++++.
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~---Ga~~Vi~~~~~~~  210 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDK---GYENLYCLGRRDR  210 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTT---CCCEEEEEECCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHc---CCcEEEEEeCCcc
Confidence            89999999 9999999 8776 554   444 999988754

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.90  E-value=0.018  Score=35.00  Aligned_cols=34  Identities=21%  Similarity=0.223  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      ++|.|+|| |.+|..++..++..   +. .|.++++++.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~---g~~~v~L~Di~~~   37 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAK---ELGDIVLLDIVEG   37 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCSEEEEECSSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC---CCCeEEEEeCCcc
Confidence            58999999 99999999998886   33 6888888754

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.88  E-value=0.016  Score=34.66  Aligned_cols=34  Identities=18%  Similarity=0.332  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |.+|..++..|...   +++|++++|++.
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~---G~~V~~~d~~~~   49 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAAT---GHTVVLVDQTED   49 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            57999987 99999999999987   689999998754

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.87  E-value=0.02  Score=34.97  Aligned_cols=37  Identities=16%  Similarity=0.184  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+++.+|+.+...|+..   +..|++..+..
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~---gAtVtv~hs~T  195 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLG---GCTVTVTHRFT  195 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHT---TCEEEEECTTC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHC---CCeEEEEeCCC
Confidence            67899999999999999999999987   56888876643

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.87  E-value=0.019  Score=35.00  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|+++.+|+.++..|+..   +..|++..+.
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~---gAtVtv~hs~  194 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNA---KATVTTCHRF  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHT---TCEEEEECTT
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHC---CCeEEEEeCC
Confidence            67899999999999999999999987   5688887654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.87  E-value=0.018  Score=36.02  Aligned_cols=36  Identities=19%  Similarity=0.113  Sum_probs=30.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++++++|.|+ |-+|+++++.|.+.   +.+|++.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~---GakVvv~D~~  205 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTE---GAKLVVTDVN  205 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHC---CCEEEEEcCC
Confidence            367899999986 89999999999997   6788887765

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.85  E-value=0.013  Score=35.64  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|+ |.+|..++..|.... ...+|.++++++.
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~-~~~~v~L~D~~~~   36 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAED   36 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEECChH
Confidence            57999999 999999999988872 2238999998754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.84  E-value=0.013  Score=36.98  Aligned_cols=33  Identities=15%  Similarity=0.131  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.| .|++|..++..|.+.   +++|++++|++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~---G~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSAR---GHEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            4788997 799999999999997   68999998864

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.84  E-value=0.019  Score=34.96  Aligned_cols=34  Identities=32%  Similarity=0.421  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc--eEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG--AIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~--~v~~~~r~~~   51 (67)
                      ++|.|+| .|.+|..++..|.+.   ++  +|++.+|++.
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~---G~~~~V~~~dr~~~   69 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRS---GFKGKIYGYDINPE   69 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHT---TCCSEEEEECSCHH
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhC---CCCCEEEEEECCHH
Confidence            6899998 899999999999997   45  8999988753

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.83  E-value=0.019  Score=33.47  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~   50 (67)
                      |+|.|.| .|.+|..++..|.+.   + ++|++.+|++
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~---g~~~v~~~~r~~   34 (263)
T 1yqg_A            1 MNVYFLG-GGNMAAAVAGGLVKQ---GGYRIYIANRGA   34 (263)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHH---CSCEEEEECSSH
T ss_pred             CEEEEEC-chHHHHHHHHHHHHC---CCCeEEEECCCH
Confidence            4788998 599999999999987   5 7899988864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.82  E-value=0.015  Score=35.92  Aligned_cols=36  Identities=14%  Similarity=0.095  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |-+|...++.+...   +.+|+++++++.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~---Ga~Vi~~~~~~~  229 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAM---GAHVVAFTTSEA  229 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            4678999998 88999999887776   567999887654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=95.82  E-value=0.014  Score=35.97  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+||+|.+|...++.+....  +.+|+++++++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~~  207 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRT--DLTVIATASRP  207 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCCH
Confidence            46789999999999999988876532  46899988754

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=95.82  E-value=0.017  Score=34.75  Aligned_cols=31  Identities=23%  Similarity=0.221  Sum_probs=27.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|.|.|+ |.+|..++..|.+.   +++|++++|
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~---g~~V~~~~r   31 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDN---GNEVRIWGT   31 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHH---CCEEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhC---CCeEEEEEc
Confidence            47889975 99999999999987   689999988

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=95.81  E-value=0.015  Score=35.28  Aligned_cols=41  Identities=12%  Similarity=0.119  Sum_probs=29.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~~   51 (67)
                      +++.|+|.|+|+ |.+|..++..|.+.+. ..++|++.+|++.
T Consensus        19 ~~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~   60 (322)
T 2izz_A           19 YFQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMD   60 (322)
T ss_dssp             ---CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence            345578999985 9999999999998620 0168999888753

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.81  E-value=0.018  Score=34.03  Aligned_cols=38  Identities=24%  Similarity=0.290  Sum_probs=30.6

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+++++|+|.|+.| +|+++++.|...+  ..+++++|++
T Consensus        24 ~~l~~~~VlvvG~Gg-lG~~va~~La~~G--vg~i~lvD~d   61 (251)
T 1zud_1           24 QKLLDSQVLIIGLGG-LGTPAALYLAGAG--VGTLVLADDD   61 (251)
T ss_dssp             HHHHTCEEEEECCST-THHHHHHHHHHTT--CSEEEEECCC
T ss_pred             HHHhcCcEEEEccCH-HHHHHHHHHHHcC--CCeEEEEeCC
Confidence            346778999998755 8999999999973  4688988775

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.80  E-value=0.025  Score=34.81  Aligned_cols=38  Identities=21%  Similarity=0.317  Sum_probs=32.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++++.|.| .|.+|+.+++.+...   +.+|++.+|++.
T Consensus       143 ~l~g~~vgIIG-~G~iG~~vA~~l~~~---G~~V~~~d~~~~  180 (333)
T 2d0i_A          143 SLYGKKVGILG-MGAIGKAIARRLIPF---GVKLYYWSRHRK  180 (333)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHGGG---TCEEEEECSSCC
T ss_pred             CCCcCEEEEEc-cCHHHHHHHHHHHHC---CCEEEEECCCcc
Confidence            36688999997 599999999999887   679999998765

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.79  E-value=0.025  Score=34.71  Aligned_cols=36  Identities=14%  Similarity=0.164  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|+ |.+|..++..++... -..+|+++++++.
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~-~~~el~l~D~~~~   36 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQD-VAKEVVMVDIKDG   36 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CSSEEEEECSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCchH
Confidence            57999996 999999999998873 2358999999765

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.78  E-value=0.017  Score=35.65  Aligned_cols=37  Identities=14%  Similarity=0.170  Sum_probs=32.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.+++++|.|++..+|+.++..|+..   +..|++++|+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~---gAtVtv~nR~  210 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLAND---GATVYSVDVN  210 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTT---SCEEEEECSS
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHC---CCEEEEEeCc
Confidence            467899999999999999999999987   5689888775

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.74  E-value=0.018  Score=34.16  Aligned_cols=34  Identities=26%  Similarity=0.252  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|.|.| .|.+|..++..|.+.   +++|++.+|++
T Consensus         4 ~~~i~iiG-~G~~G~~~a~~l~~~---g~~V~~~~~~~   37 (301)
T 3cky_A            4 SIKIGFIG-LGAMGKPMAINLLKE---GVTVYAFDLME   37 (301)
T ss_dssp             CCEEEEEC-CCTTHHHHHHHHHHT---TCEEEEECSSH
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHC---CCeEEEEeCCH
Confidence            46899997 699999999999886   57899888864

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=95.73  E-value=0.021  Score=31.05  Aligned_cols=39  Identities=13%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             hhhhcc-CCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490          7 VDDFYR-DGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus         7 ~~~~~~-~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +..+++ .++|.|.|++   |.+|..++++|++.   +++|+.++.
T Consensus        15 l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~---G~~v~~Vnp   57 (144)
T 2d59_A           15 IREILTRYKKIALVGASPKPERDANIVMKYLLEH---GYDVYPVNP   57 (144)
T ss_dssp             HHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECT
T ss_pred             HHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHC---CCEEEEECC
Confidence            456675 7899999998   89999999999886   467766643

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.72  E-value=0.027  Score=34.60  Aligned_cols=37  Identities=16%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++|.|+|+ |.+|..++..|+... -+ +|+++++++.
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~-~~-~v~l~Di~~~   40 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQ-LG-DVVLFDIAQG   40 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CC-EEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-Cc-eEEEEeCChH
Confidence            4578999995 999999999988862 12 8999998765

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.72  E-value=0.031  Score=33.18  Aligned_cols=33  Identities=12%  Similarity=0.142  Sum_probs=25.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++|.|.|++|.+|+.+++.+.+. + +.++..+..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~-~-~~elva~~d   33 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAA-D-DLTLSAELD   33 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHC-T-TCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC-C-CCEEEEEEc
Confidence            47999999999999999998765 2 356665443

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.71  E-value=0.018  Score=34.18  Aligned_cols=33  Identities=24%  Similarity=0.349  Sum_probs=28.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.| .|.+|..++..|...   +++|++.+|++
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~---g~~V~~~~~~~   38 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKA---GYSLVVSDRNP   38 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             ceEEEEC-chHHHHHHHHHHHhC---CCEEEEEeCCH
Confidence            5899998 799999999999986   57899888864

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.70  E-value=0.023  Score=34.67  Aligned_cols=40  Identities=13%  Similarity=0.189  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   54 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~   54 (67)
                      .++|.|+|+ |++|..++..|+... ...+|.++|.++....
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~-~~~ev~L~Di~~~~~~   46 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAI   46 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCChHHHH
Confidence            468999998 999999999988862 2348999998765433

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=95.70  E-value=0.031  Score=33.14  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=25.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEE-EEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIY-IMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~-~~~r~~   50 (67)
                      ++|.|+|+ |.+|+.+++.+.+. ++  ++. ++++++
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~~-~~--eLva~~d~~~   37 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEEK-GH--EIVGVIENTP   37 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT-TC--EEEEEECSSC
T ss_pred             eEEEEECc-CHHHHHHHHHHHhC-CC--EEEEEEecCc
Confidence            68999999 99999999999886 23  444 466654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.70  E-value=0.014  Score=36.97  Aligned_cols=35  Identities=20%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+|+|. |-+|+.+++.|.+.   +..|+++++++.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~---g~~vvvId~d~~   38 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSS---GVKMVVLDHDPD   38 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHT---TCCEEEEECCHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHC---CCCEEEEECCHH
Confidence            457899986 88999999999987   689999998754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.69  E-value=0.028  Score=34.67  Aligned_cols=37  Identities=16%  Similarity=0.113  Sum_probs=29.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++|.|+|+ |.+|..++..|+... -..+|+++++++
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~-~~~el~l~D~~~   44 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQG-IAQEIGIVDIFK   44 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEeCCh
Confidence            3578999996 999999999998873 234899998853

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.68  E-value=0.02  Score=34.51  Aligned_cols=36  Identities=22%  Similarity=0.217  Sum_probs=30.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++|.|.| .|.+|..++..|.+.   +++|++.+|++.
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~---G~~V~~~dr~~~   55 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKN---GFKVTVWNRTLS   55 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSSGG
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHC---CCeEEEEeCCHH
Confidence            346899995 799999999999997   689999998765

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.67  E-value=0.029  Score=34.36  Aligned_cols=35  Identities=14%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      .++|.|+|| |.+|..++..|...   +. .|.++++++.
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~---g~~~v~L~Di~~~   39 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQK---NLGDVVLFDIVKN   39 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCCeEEEEeCCHH
Confidence            358999998 99999999998886   33 6888888754

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.66  E-value=0.028  Score=34.85  Aligned_cols=40  Identities=25%  Similarity=0.395  Sum_probs=32.7

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++++|+|.|+ |.+|+.+++.|...+  ..++++++++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~  152 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQ  152 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCB
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCc
Confidence            44567889999987 678999999999983  56899999864

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.65  E-value=0.012  Score=35.00  Aligned_cols=34  Identities=21%  Similarity=0.238  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.| .|.+|..+...|.+.   +++|++.+|++.
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~---G~~V~~~dr~~~   35 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRA---GFDVTVWNRNPA   35 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHH---TCCEEEECSSGG
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHC---CCeEEEEcCCHH
Confidence            4688886 799999999999998   689999999765

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.64  E-value=0.034  Score=34.00  Aligned_cols=36  Identities=11%  Similarity=-0.001  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |-+|...++.+...   +.+|+++++++.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~---Ga~Vi~~~~~~~  215 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAM---GHHVTVISSSNK  215 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEESSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEeCChH
Confidence            5779999995 99999999988776   568999888654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.64  E-value=0.056  Score=31.70  Aligned_cols=35  Identities=26%  Similarity=0.423  Sum_probs=30.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +++++++|.|| |-+|..-++.|++.   +..|++++..
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~---GA~VtVvap~   63 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQE---GAAITVVAPT   63 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGG---CCCEEEECSS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEECCC
Confidence            67889999986 78999999999998   6789988765

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.64  E-value=0.039  Score=33.50  Aligned_cols=34  Identities=12%  Similarity=-0.040  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      ++|.|+| .|.+|..++..|.+.   + ++|++.+|++.
T Consensus        25 m~IgvIG-~G~mG~~lA~~L~~~---G~~~V~~~dr~~~   59 (317)
T 4ezb_A           25 TTIAFIG-FGEAAQSIAGGLGGR---NAARLAAYDLRFN   59 (317)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTT---TCSEEEEECGGGG
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHc---CCCeEEEEeCCCc
Confidence            5799997 799999999999997   6 89999999863

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.63  E-value=0.026  Score=34.56  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=28.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      ++|.|+|| |.+|..++..|...   +. .|+++++++.
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~---g~~~V~L~Di~~~   49 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQK---DLGDVYMFDIIEG   49 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCCEEEEECSSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhC---CCCeEEEEECCHH
Confidence            58999998 99999999888886   44 7999998754

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.62  E-value=0.031  Score=34.41  Aligned_cols=34  Identities=18%  Similarity=0.054  Sum_probs=28.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      ..+.+|+|+||+|.+|...++.+...   +.+|+++.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~---Ga~Vi~~~  196 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLS---GYIPIATC  196 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHC---CCEEEEEe
Confidence            35678999999999999999888776   56787765

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=95.62  E-value=0.016  Score=35.53  Aligned_cols=36  Identities=19%  Similarity=-0.006  Sum_probs=29.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      .+.+++|+|+ |.+|...++.+...   +. +|+++++++.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~---Ga~~Vi~~~~~~~  226 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVA---GASRIIGVDINKD  226 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHH---TCSEEEEECSCGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCCeEEEEcCCHH
Confidence            4678999996 99999999888776   45 7888887654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=95.60  E-value=0.032  Score=33.98  Aligned_cols=35  Identities=17%  Similarity=0.144  Sum_probs=28.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+|+ |.+|...++.+...   +.+|+++++++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~---Ga~Vi~~~~~~  202 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAY---GAFVVCTARSP  202 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc---CCEEEEEcCCH
Confidence            4679999997 99999999887766   56788887753

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=95.59  E-value=0.032  Score=34.24  Aligned_cols=35  Identities=11%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|+| +|.+|...++.+...   +.+|+++++++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~---Ga~Vi~~~~~~  223 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKAT---GAEVIVTSSSR  223 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHc---CCEEEEEecCc
Confidence            467899999 899999999888776   56899988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	67
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	6e-06
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	7e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	3e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-05
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-05
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-04
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	1e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-04
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-04
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	4e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	4e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	5e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	6e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.003

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.6 bits (93), Expect = 2e-06
 Identities = 13/59 (22%), Positives = 21/59 (35%)

Query: 9  DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
           F++  ++ VTG TGF G  L   L      +    +            RV + + S  
Sbjct: 4  SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEI 62

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.8 bits (91), Expect = 4e-06
 Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK 51
          +LVTG +G  G+++  KL            +VR  +
Sbjct: 6  VLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQ 40

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.4 bits (90), Expect = 6e-06
 Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPE 56
          +L+ GGTG++GK +++  +         Y++ R +  S+ +
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNID 43

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.0 bits (89), Expect = 7e-06
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          IL+ G TG++G+ +    L         +++VR+   SS  E+ + 
Sbjct: 6  ILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNSEKAQL 48

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 37.5 bits (85), Expect = 3e-05
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          +LVTG  GF+   ++++LL 
Sbjct: 14 VLVTGANGFVASHVVEQLLE 33

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.6 bits (85), Expect = 3e-05
 Identities = 9/52 (17%), Positives = 20/52 (38%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
          ++V GG G+ G      L +   ++  +  +VR              + S++
Sbjct: 4  VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIH 55

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (85), Expect = 3e-05
 Identities = 7/35 (20%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
          + + G +G  G++L+ ++L        + ++ R K
Sbjct: 17 VFILGASGETGRVLLKEILEQ-GLFSKVTLIGRRK 50

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 37.3 bits (85), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 5/43 (11%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVRDKKGSSPEE 57
          I V G TG  G  LI          G  +   V   KG   EE
Sbjct: 6  IAVVGATGRQGASLIRVAAAV----GHHVRAQVHSLKGLIAEE 44

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 37.1 bits (85), Expect = 4e-05
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLL-RSFPDIGAIYIMVRDK 50
          +LVTGG GF+G   + +LL  ++PD+ A  ++V D 
Sbjct: 3  LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.9 bits (84), Expect = 4e-05
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK-KGSSPEERVKNMLNS 65
          I+VTGG GF+G   +  +  + PD   +++ V DK   +  +  ++ +L  
Sbjct: 5  IIVTGGAGFIGSNFVHYVYNNHPD---VHVTVLDKLTYAGNKANLEAILGD 52

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.3 bits (82), Expect = 6e-05
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK 50
          +L+ G TG  G+ L+D++L   P +  +    R  
Sbjct: 5  VLLAGATGLTGEHLLDRILSE-PTLAKVIAPARKA 38

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (80), Expect = 1e-04
 Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKN 61
          +L+ G  GF+G  L ++LLR         +   D    +    + +
Sbjct: 3  VLILGVNGFIGNHLTERLLRE----DHYEVYGLDIGSDAISRFLNH 44

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (80), Expect = 1e-04
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD 49
          I + G TG  G   + + +++  +   + ++VRD
Sbjct: 6  IAIFGATGQTGLTTLAQAVQAGYE---VTVLVRD 36

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.8 bits (81), Expect = 1e-04
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS 53
          +LVTGG G++G   + +L+ +  D      +      S
Sbjct: 4  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS 41

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.7 bits (81), Expect = 1e-04
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEER 58
           L+TG  GF+G  L++ LL+    +  +       + +  E R
Sbjct: 19 WLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR 61

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 35.4 bits (79), Expect = 1e-04
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          I+VTGG GF+G  ++  L  
Sbjct: 2  IIVTGGAGFIGSNIVKALND 21

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
          IL+TGG GF+G  L DKL+    ++  +     D   +  +  V++ +   N
Sbjct: 4  ILITGGAGFVGSHLTDKLMMDGHEVTVV-----DNFFTGRKRNVEHWIGHEN 50

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 34.8 bits (78), Expect = 2e-04
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          +LV GG G++G   +  LLR
Sbjct: 5  VLVCGGAGYIGSHFVRALLR 24

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 34.6 bits (78), Expect = 3e-04
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN 64
          +LVTGG+G++G     +LL++  D+  +  +   K+   P        +
Sbjct: 3  VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH 51

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (77), Expect = 3e-04
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
          +LVTGG G++G   + +LL +      I       +G          +  + 
Sbjct: 5  VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT 56

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 34.2 bits (77), Expect = 3e-04
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 8  DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEE 57
          D++   G +LVTGGTG +G  +   L R     GA ++++  + G   + 
Sbjct: 4  DEWKPTGTVLVTGGTGGVGGQIARWLARR----GAPHLLLVSRSGPDADG 49

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 34.1 bits (77), Expect = 4e-04
 Identities = 4/20 (20%), Positives = 10/20 (50%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          + + G  G +G  +  +L +
Sbjct: 5  VFIAGHRGMVGSAIRRQLEQ 24

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 34.1 bits (76), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIG 41
          IL+ G TG +G  L   L      I 
Sbjct: 3  ILLFGKTGQVGWELQRSLAPVGNLIA 28

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 34.0 bits (77), Expect = 5e-04
 Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSVN 67
          IL+TGG GF+G  ++  ++++  D     + +     +   E + ++  S  
Sbjct: 3  ILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNLESLSDISESNR 51

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 33.9 bits (76), Expect = 5e-04
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          +L+TGG GF+G  L    L 
Sbjct: 3  LLITGGCGFLGSNLASFALS 22

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.8 bits (76), Expect = 6e-04
 Identities = 6/20 (30%), Positives = 10/20 (50%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          I +TG  GF+   +  +L  
Sbjct: 18 ISITGAGGFIASHIARRLKH 37

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 33.3 bits (74), Expect = 0.001
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
          IL+TG  G +G+ +  +L  
Sbjct: 4  ILITGANGQLGREIQKQLKG 23

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 32.7 bits (73), Expect = 0.001
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
           L+TG TG  G  L + LL 
Sbjct: 4  ALITGITGQDGSYLTEFLLG 23

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 32.7 bits (73), Expect = 0.001
 Identities = 10/20 (50%), Positives = 10/20 (50%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
           LVTG TG  G  L   LL 
Sbjct: 3  ALVTGITGQDGAYLAKLLLE 22

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.5 bits (70), Expect = 0.003
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 16 ILVTGGTGFMGKLLIDKLLR 35
           L+TG TG  G  L + LL 
Sbjct: 4  ALITGITGQDGSYLAEFLLE 23

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	67
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.38
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.28
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.26
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.24
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.21
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.2
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.18
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.17
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.16
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.16
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.16
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.15
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.13
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.12
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.11
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.11
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.1
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.09
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.08
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.08
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.06
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.04
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.04
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.04
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.03
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.02
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.93
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.89
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.82
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.81
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.8
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.79
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.78
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.76
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.74
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.7
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.69
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.69
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.66
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.66
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.66
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.65
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.65
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.64
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.64
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.62
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.62
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.61
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.61
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.61
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.61
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.61
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.61
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.61
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	98.6
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.59
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.59
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.59
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.58
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.58
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.58
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.57
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.57
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.57
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.56
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.56
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.56
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.56
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.56
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.55
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.52
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.51
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.51
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.51
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.49
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.49
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.48
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.47
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.45
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.44
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.4
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.39
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.35
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.34
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.28
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.27
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.22
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.22
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.13
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.13
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	98.09
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.02
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.97
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.93
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.91
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.9
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.9
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.89
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.89
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.87
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.82
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.78
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.76
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.76
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.74
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.65
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.53
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.5
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.47
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.43
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.43
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.4
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.4
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.3
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.28
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.25
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.23
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.22
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.21
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.21
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.2
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.15
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.11
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.1
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.09
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.09
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.07
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.06
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.97
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.95
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	96.92
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.91
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.9
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.89
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.89
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.81
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.8
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.74
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.69
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.66
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.65
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	96.57
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.57
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.55
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.53
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.53
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.48
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.41
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	96.38
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.37
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.35
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.35
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.35
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.34
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	96.31
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.29
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.27
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.26
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.24
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.24
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.2
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.15
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	96.15
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.15
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.15
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.12
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.08
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.07
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.04
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.03
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.92
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.89
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.84
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	95.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	95.81
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.8
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.77
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.76
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.73
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.72
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.71
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.7
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.68
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.67
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.66
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.65
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.55
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.55
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.54
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.53
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.51
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.43
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.42
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.36
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.35
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.35
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.34
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.33
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.32
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.23
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.21
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.19
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.17
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.17
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.16
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.15
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.1
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.08
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.0
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.0
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.96
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.92
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.88
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.87
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.72
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.7
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.69
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.63
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.53
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	94.51
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.51
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.4
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	94.38
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.31
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.11
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.05
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	94.02
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.02
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.95
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.93
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.9
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.89
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.86
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.79
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	93.71
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.69
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.58
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.57
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.45
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.42
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.11
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.08
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.97
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.68
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.15
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.13
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.07
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.66
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.62
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.55
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.45
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.43
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.43
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.36
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	91.23
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.01
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.79
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	90.62
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.61
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.57
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.34
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.19
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	90.04
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.0
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.65
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.61
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.51
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.31
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	89.08
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.04
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.01
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.63
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	88.42
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.41
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	88.24
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.0
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	87.97
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	87.72
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	87.38
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.33
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.02
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.82
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.17
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	85.98
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.92
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.54
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.28
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	84.28
d1sbza_	186	Probable aromatic acid decarboxylase Pad1 {Escheri	84.02
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	83.84
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.81
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.62
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	82.43
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.3
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	82.08
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.01
d2i3ba1	189	Cancer-related NTPase, C1orf57 {Human (Homo sapien	81.79
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	81.24
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.08
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.83
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	80.74
d1m8pa3	183	ATP sulfurylase C-terminal domain {Fungus (Penicil	80.69

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.38  E-value=3.7e-13  Score=80.28  Aligned_cols=42  Identities=24%  Similarity=0.276  Sum_probs=37.7

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .+++++|+||||||+||||++++++|++.   +++|++++|..+.
T Consensus         3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~---g~~V~~~~r~~~~   44 (356)
T d1rkxa_           3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTM---GATVKGYSLTAPT   44 (356)
T ss_dssp             HHHHTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCSS
T ss_pred             hhhhCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCCCc
Confidence            35789999999999999999999999998   6899999997653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.28  E-value=2.9e-12  Score=74.08  Aligned_cols=48  Identities=19%  Similarity=0.210  Sum_probs=39.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLN   64 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~   64 (67)
                      |+|||||||||||++++++|.++   +++|++++|++.+......++++++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~---g~~Vi~~~r~~~D~~d~~~~~~~l~   49 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGK---NVEVIPTDVQDLDITNVLAVNKFFN   49 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTS---SEEEEEECTTTCCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC---CCEEEEeechhccCCCHHHHHHHHH
Confidence            68999999999999999999987   7899999998765555555555543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.26  E-value=5.3e-12  Score=75.70  Aligned_cols=38  Identities=18%  Similarity=0.224  Sum_probs=33.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|+||||||+||||++++++|+++   +++|+++++...
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~---g~~V~~~d~~~~   50 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHE---GHYVIASDWKKN   50 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHC---cCEEEEEeCCCc
Confidence            47899999999999999999999997   689999987543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.24  E-value=7.7e-12  Score=72.14  Aligned_cols=40  Identities=28%  Similarity=0.518  Sum_probs=34.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCCh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSP   55 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~   55 (67)
                      .|+|||||||||||++++++|++.   +++|++++|++.....
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~---G~~V~~l~R~~~~~~~   42 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDL---GHPTFLLVRESTASSN   42 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT---TCCEEEECCCCCTTTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEECCCccccc
Confidence            468999999999999999999997   6899999998765443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.21  E-value=1.3e-11  Score=72.63  Aligned_cols=35  Identities=31%  Similarity=0.245  Sum_probs=32.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+||||||+||||++++++|+++   +++|++++|..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~---g~~V~~~~r~~~   35 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEK---GYRVHGLVARRS   35 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCCC
Confidence            58999999999999999999997   689999999754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.1e-11  Score=69.91  Aligned_cols=41  Identities=17%  Similarity=0.380  Sum_probs=34.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++++|+|||||||||++++++|++.+ ..++|++++|++..
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~   52 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLT   52 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhh
Confidence            457899999999999999999999983 23589999997654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.18  E-value=1.8e-11  Score=72.47  Aligned_cols=34  Identities=29%  Similarity=0.259  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |++||||||||||++|+++|++.   +++|++++|..
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~---g~~V~~~~r~~   35 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGK---GYEVHGLIRRS   35 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHC---cCEEEEEECCC
Confidence            68999999999999999999998   79999999854

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.8e-11  Score=72.69  Aligned_cols=35  Identities=31%  Similarity=0.327  Sum_probs=31.3

Q ss_pred             CeE-EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQI-LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~i-litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+| |||||+||||++++++|++.   +++|++++|..+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~---g~~V~~i~r~~~   36 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEK---GYEVHGIVRRSS   36 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCCS
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHC---cCEEEEEECCCc
Confidence            467 99999999999999999997   789999999643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.16  E-value=2.2e-11  Score=72.79  Aligned_cols=38  Identities=24%  Similarity=0.355  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -++++||||||+||||++++++|+++   +++|++++|+..
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~---G~~V~~~vR~~~   46 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEH---GYKVRGTARSAS   46 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHC---cCEEEEEeCCch
Confidence            35899999999999999999999998   689999998643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.16  E-value=2.7e-11  Score=70.34  Aligned_cols=39  Identities=26%  Similarity=0.574  Sum_probs=34.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   54 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~   54 (67)
                      .++|||||||||||++++++|+++   +++|++++|++....
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~---G~~V~~~~R~~~~~~   41 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISL---GHPTYVLFRPEVVSN   41 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHT---TCCEEEECCSCCSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC---CCEEEEEECCCcccc
Confidence            457999999999999999999997   689999999866443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.16  E-value=7.6e-11  Score=70.25  Aligned_cols=34  Identities=29%  Similarity=0.441  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+||||||+||||+++++.|++.   +++|++++|..
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~---g~~V~~~d~~~   34 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQN---GHDVIILDNLC   34 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---cCEEEEEECCC
Confidence            68999999999999999999998   68999998743

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.15  E-value=1.5e-11  Score=73.26  Aligned_cols=37  Identities=24%  Similarity=0.302  Sum_probs=32.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.|+|||||||||||++++++|++.   +++|++++|..
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~---g~~V~~~d~~~   50 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKL---DQKVVGLDNFA   50 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHC---cCEEEEEECCC
Confidence            44679999999999999999999998   68999999744

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.3e-11  Score=67.37  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=33.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++|+||||||++|++++++|+++   +++|++++|++.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~---g~~V~~~~R~~~   38 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQA---GYEVTVLVRDSS   38 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---cCEEEEEEcChh
Confidence            3578999999999999999999998   689999999654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=1.5e-10  Score=69.03  Aligned_cols=35  Identities=23%  Similarity=0.351  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |.||||||+||||++++++|++.   +++|+++++...
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~---g~~V~~~d~~~~   36 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIEN---GYDCVVADNLSN   36 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECCSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC---cCeEEEEECCCC
Confidence            57999999999999999999997   689999986433

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.11  E-value=4.2e-11  Score=72.44  Aligned_cols=32  Identities=22%  Similarity=0.359  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      ||+||||||+||||++++++|++.   +++|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~---g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKK---NYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHC---cCEEEEEe
Confidence            689999999999999999999997   68999986

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.11  E-value=5.3e-11  Score=71.07  Aligned_cols=37  Identities=27%  Similarity=0.214  Sum_probs=33.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.|+|+|||||||||++++++|+++   +++|+++.|+++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~---G~~V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAV---GHHVRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHT---TCCEEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhC---CCeEEEEECCcc
Confidence            4578999999999999999999997   689999999765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.10  E-value=2e-10  Score=67.44  Aligned_cols=31  Identities=29%  Similarity=0.483  Sum_probs=28.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +||||||+||||++++++|+++   +++|+++++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~---g~~V~~id~   32 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQ---GIDLIVFDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT---TCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHC---cCEEEEEEC
Confidence            6999999999999999999998   689999875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.09  E-value=5e-11  Score=71.71  Aligned_cols=34  Identities=29%  Similarity=0.232  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |.+|||||+||||++++++|++.   +++|++++|..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~---g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEK---GYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC---cCEEEEEECCC
Confidence            67899999999999999999997   68999999854

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=6.6e-11  Score=70.45  Aligned_cols=32  Identities=28%  Similarity=0.466  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++||||||+||||++|+++|++.   +++|+++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~---g~~V~~ld~   34 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEA---GYLPVVIDN   34 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHT---TCCEEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHC---cCEEEEEEC
Confidence            58999999999999999999997   689999975

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.08  E-value=9.4e-11  Score=70.75  Aligned_cols=34  Identities=29%  Similarity=0.569  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .|+||||||+||||++++++|++..  +++|+++|+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~--~~~V~~~D~   35 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDS   35 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhC--CCEEEEEec
Confidence            5799999999999999999999852  689999985

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.5e-10  Score=68.50  Aligned_cols=33  Identities=36%  Similarity=0.582  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+|+||||+||||++++++|++.   +++|+++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~---g~~V~~~d~~   34 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMD---GHEVTVVDNF   34 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC---cCEEEEEeCC
Confidence            68999999999999999999997   6899999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=1.6e-10  Score=67.88  Aligned_cols=49  Identities=10%  Similarity=0.238  Sum_probs=34.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC-CCCCChHHHHHHHhh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD-KKGSSPEERVKNMLN   64 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~-~~~~~~~~~~~~~~~   64 (67)
                      .|+|||||||||||++|+++|++.   ++.++++++. .-+......+.+++.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~---g~~vi~~~~~~~~~~~~~~~~~~~~~   51 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQR---GDVELVLRTRDELNLLDSRAVHDFFA   51 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTC---TTEEEECCCTTTCCTTCHHHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC---cCEEEEecCchhccccCHHHHHHHHh
Confidence            368999999999999999999997   5666666543 333334455555543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.04  E-value=1.1e-10  Score=69.57  Aligned_cols=32  Identities=28%  Similarity=0.527  Sum_probs=26.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .|+|||||||||||++++++|++.   ++.|.++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~---g~~v~v~~   33 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNN---HPDVHVTV   33 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHH---CTTCEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHC---CCCeEEEE
Confidence            579999999999999999999998   45444433

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.04  E-value=1.4e-10  Score=65.20  Aligned_cols=38  Identities=24%  Similarity=0.482  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+|+|||||||||++++++|++++ ...+|+++.|++.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~-~~~~v~~~~r~~~   39 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEP-TLAKVIAPARKAL   39 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCT-TCCEEECCBSSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEEEeCCch
Confidence            4799999999999999999999972 2237888888654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.03  E-value=1.6e-10  Score=68.62  Aligned_cols=34  Identities=29%  Similarity=0.465  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+||||||+||||++++++|++++  ..+|+++++.
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g--~~~V~~ld~~   34 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDIG   34 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEESC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence            689999999999999999999872  2489999874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.02  E-value=1.3e-10  Score=70.05  Aligned_cols=32  Identities=25%  Similarity=0.636  Sum_probs=27.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcce-EEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGA-IYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~-v~~~~r   48 (67)
                      |+||||||+||||++|+++|++.   +++ |+++++
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~---g~~vv~~~d~   33 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKN---TQDTVVNIDK   33 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHH---CSCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHC---CCCEEEEEeC
Confidence            68999999999999999999998   454 555654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.93  E-value=5.4e-10  Score=64.47  Aligned_cols=33  Identities=24%  Similarity=0.175  Sum_probs=26.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+||||||+||||++++++|.+.   ++ ++.+++..
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~---g~-~v~~~~~~   33 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPV---GN-LIALDVHS   33 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTT---SE-EEEECTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhC---CC-EEEEECCC
Confidence            68999999999999999999886   44 55555543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.89  E-value=1.1e-09  Score=60.95  Aligned_cols=37  Identities=27%  Similarity=0.296  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++||||||+||||+++++.|++++.. ..|+.+.|++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~-v~v~~~~R~~   39 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSA   39 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTT-CEEEEEESCH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCc-EEEEEEcCCH
Confidence            358999999999999999999997321 2566677754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.89  E-value=8.7e-10  Score=63.71  Aligned_cols=31  Identities=35%  Similarity=0.609  Sum_probs=26.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ||||||+||||++++++|++++  .++|+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g--~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKG--ITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTT--CCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCC--CCeEEEEEC
Confidence            8999999999999999999972  247888874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.82  E-value=4e-10  Score=66.62  Aligned_cols=35  Identities=29%  Similarity=0.552  Sum_probs=27.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCC---cceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPD---IGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~---~~~v~~~~r   48 (67)
                      |+|+||||+||||++++++|++.+..   ..+|+.++.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~   38 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS   38 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeC
Confidence            68999999999999999999997321   135666654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4.3e-09  Score=61.42  Aligned_cols=41  Identities=17%  Similarity=0.343  Sum_probs=36.9

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++||+++||||++.||+++++.|++.   |.+|++++|+.+
T Consensus         9 ~~~L~GK~alITGassGIG~aiA~~la~~---G~~Vil~~r~~~   49 (269)
T d1xu9a_           9 PEMLQGKKVIVTGASKGIGREMAYHLAKM---GAHVVVTARSKE   49 (269)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             ccccCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            45689999999999999999999999998   689999999754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.2e-08  Score=58.63  Aligned_cols=39  Identities=13%  Similarity=0.164  Sum_probs=35.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++||.++||||++.||.+++++|++.   |++|++++|+.+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~---G~~V~~~~r~~~   40 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQ---GASAVLLDLPNS   40 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEECTTS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCChH
Confidence            378999999999999999999999998   789999999865

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.79  E-value=1e-08  Score=59.62  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=35.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+..
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~---Ga~V~i~~r~~~   44 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAA---GANVAVIYRSAA   44 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHT---TEEEEEEESSCT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            78999999999999999999999998   789999999865

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.78  E-value=4.9e-09  Score=61.54  Aligned_cols=40  Identities=20%  Similarity=0.204  Sum_probs=36.2

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++||+++||||++.||+++++.|++.   |.+|++.+|+..
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~---Ga~Vii~~r~~~   60 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSL---GAQCVIASRKMD   60 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCHH
Confidence            3588999999999999999999999998   789999999754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.76  E-value=5.8e-09  Score=58.33  Aligned_cols=39  Identities=18%  Similarity=0.141  Sum_probs=35.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||+|.||+.+++.|++.   +.+|++++|+.+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~---G~~V~~~~r~~~   58 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGE---GAEVVLCGRKLD   58 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhh---ccchhhcccchH
Confidence            478999999999999999999999998   689999999864

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.74  E-value=9.2e-09  Score=59.82  Aligned_cols=39  Identities=8%  Similarity=0.166  Sum_probs=35.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++|+++||||++.||..++++|++.   +.+|++++|+.++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~---G~~vii~~r~~~~   41 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKR---NLKNFVILDRVEN   41 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---CCSEEEEEESSCC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHC---CCEEEEEECCccc
Confidence            68999999999999999999999998   6788888887654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.70  E-value=1.3e-08  Score=58.65  Aligned_cols=39  Identities=21%  Similarity=0.279  Sum_probs=35.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||++.||+++++.|++.   +.+|++.+|+..
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   42 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAAD---GHKVAVTHRGSG   42 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCcc
Confidence            478999999999999999999999998   789999999754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.69  E-value=2.2e-08  Score=58.03  Aligned_cols=39  Identities=8%  Similarity=0.110  Sum_probs=34.8

Q ss_pred             hccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+++||||+|  .||.++++.|++.   |.+|++.+|++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~---Ga~V~i~~r~~~   42 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQ---GATLAFTYLNES   42 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTT---TCEEEEEESSTT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH
Confidence            47899999999887  7999999999997   789999999743

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.69  E-value=1.9e-08  Score=58.64  Aligned_cols=42  Identities=17%  Similarity=0.106  Sum_probs=36.5

Q ss_pred             hhhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          7 VDDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         7 ~~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+..+++|+++||||++.||+++++.|++.   +.+|++.+|+..
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~---Ga~Vvi~~~~~~   53 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRR---GCKVIVNYANST   53 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEeCCch
Confidence            344588999999999999999999999998   789999888643

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1.5e-08  Score=58.55  Aligned_cols=38  Identities=21%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++||||++.||+++++.|++.   +++|++.+|++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~---G~~V~~~~r~~   41 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHAT---GARVVAVSRTQ   41 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCH
Confidence            378999999999999999999999998   78999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.66  E-value=1.8e-08  Score=58.47  Aligned_cols=39  Identities=15%  Similarity=0.075  Sum_probs=34.0

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++|+++||||++.||+++++.|++.   +++|++..++.
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~---G~~Vvi~~~~~   40 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRR---GASVVVNYGSS   40 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEcCCC
Confidence            3578999999999999999999999998   68888776653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.66  E-value=2.8e-08  Score=57.56  Aligned_cols=39  Identities=18%  Similarity=0.315  Sum_probs=35.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~---G~~V~~~~~~~~   40 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFARE---GALVALCDLRPE   40 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            478999999999999999999999998   689999999754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.66  E-value=2.3e-08  Score=58.34  Aligned_cols=38  Identities=16%  Similarity=0.284  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+..
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~---G~~Vv~~~r~~~   42 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATE---KAKVVVNYRSKE   42 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcH
Confidence            78999999999999999999999998   689999998753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.65  E-value=2.3e-08  Score=58.17  Aligned_cols=38  Identities=26%  Similarity=0.436  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|++.
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~---G~~V~i~~r~~~   41 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGL---GARVYTCSRNEK   41 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            68999999999999999999999998   689999999753

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.65  E-value=1.8e-08  Score=58.46  Aligned_cols=38  Identities=24%  Similarity=0.280  Sum_probs=34.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|+++   +.+|++.+|+.+
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~---Ga~V~i~~r~~~   40 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEA---GCSVVVASRNLE   40 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            67999999999999999999999998   789999998754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.64  E-value=2.9e-08  Score=56.94  Aligned_cols=37  Identities=24%  Similarity=0.351  Sum_probs=34.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +++|++.+|++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~---Ga~V~~~~r~~   38 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQE---GAEVTICARNE   38 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            57899999999999999999999998   78999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.64  E-value=1.9e-08  Score=58.42  Aligned_cols=38  Identities=18%  Similarity=0.119  Sum_probs=34.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++|+++||||++.||+++++.|++.   +.+|++.+|+.
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~---Ga~V~~~~r~~   38 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQ---GADIVLNGFGD   38 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEECCSC
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEeCCc
Confidence            368999999999999999999999998   68999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.62  E-value=4.1e-08  Score=57.21  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=34.8

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++||||++.||+.+++.|+++   +.+|++.+|+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~---Ga~V~i~~r~~   40 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRY---GAKVVIADIAD   40 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            478999999999999999999999998   68999999864

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.62  E-value=4.9e-08  Score=55.32  Aligned_cols=36  Identities=19%  Similarity=0.214  Sum_probs=33.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+++||||++.||+++++.|++.   |++|++.+|+++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~---Ga~V~i~~~~~~   36 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKAR---GYRVVVLDLRRE   36 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEESSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCcc
Confidence            478999999999999999999998   789999998765

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.61  E-value=5.1e-08  Score=56.67  Aligned_cols=39  Identities=23%  Similarity=0.253  Sum_probs=35.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   40 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEE---GTAIALLDMNRE   40 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            368999999999999999999999998   789999998743

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.61  E-value=2.4e-08  Score=57.96  Aligned_cols=37  Identities=16%  Similarity=0.219  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+.
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~---Ga~V~~~~r~~   39 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVRE---GARVAIADINL   39 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHT---TEEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            68999999999999999999999998   78999999864

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.61  E-value=4.2e-08  Score=56.36  Aligned_cols=39  Identities=21%  Similarity=0.265  Sum_probs=34.6

Q ss_pred             hccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+++||||++  .||+++++.|++.   +.+|++.+|++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~---G~~V~i~~~~~~   42 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQNDK   42 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            47899999999998  7999999999997   789999998744

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.61  E-value=5.2e-08  Score=55.77  Aligned_cols=37  Identities=16%  Similarity=0.185  Sum_probs=32.9

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|+||||++.||+++++.|++.   +.+|+++++...
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~---G~~V~~~~~~~~   37 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRAR---NWWVASIDVVEN   37 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCcc
Confidence            4789999999999999999999997   689999888643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=3e-08  Score=58.78  Aligned_cols=41  Identities=24%  Similarity=0.368  Sum_probs=36.6

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +..+++|+++||||++.||+++++.|++.   +.+|++.+|+.+
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~---Ga~Vvi~~r~~~   47 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLEL---GSNVVIASRKLE   47 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            34689999999999999999999999998   789999999743

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=4.6e-08  Score=56.84  Aligned_cols=39  Identities=26%  Similarity=0.270  Sum_probs=35.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||++.||.++++.|+++   |.+|++.+|++.
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~---G~~Vv~~~r~~~   45 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQ---GLKVVGCARTVG   45 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            388999999999999999999999998   789999998743

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.61  E-value=3.4e-08  Score=57.21  Aligned_cols=38  Identities=21%  Similarity=0.238  Sum_probs=34.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~---Ga~V~~~~r~~   40 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEE---GAKVMITGRHS   40 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            478999999999999999999999998   78999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.61  E-value=3.2e-08  Score=57.58  Aligned_cols=38  Identities=26%  Similarity=0.406  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   43 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASL---GASVYTCSRNQK   43 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            67999999999999999999999998   689999998643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.60  E-value=6.4e-08  Score=55.66  Aligned_cols=41  Identities=22%  Similarity=0.285  Sum_probs=34.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGS   53 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~   53 (67)
                      .|+|+||||++.||.++++.|++....+++|++.+|+++..
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~   42 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA   42 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            36899999999999999999986433478999999987644

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=4.8e-08  Score=56.34  Aligned_cols=37  Identities=22%  Similarity=0.256  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +++|++.+|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~---Ga~V~~~~r~~   39 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHAS---GAKVVAVTRTN   39 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            68999999999999999999999998   78999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.59  E-value=4.9e-08  Score=56.25  Aligned_cols=38  Identities=24%  Similarity=0.388  Sum_probs=34.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|+++   +++|++.+|+..
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~---G~~V~~~~r~~~   40 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFARE---GASLVAVDREER   40 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            68999999999999999999999998   789999998743

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.59  E-value=5.7e-08  Score=56.15  Aligned_cols=39  Identities=18%  Similarity=0.223  Sum_probs=35.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||++.||+++++.|++.   +.+|++.+|++.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~---Ga~V~~~~~~~~   40 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVE---GADIAIADLVPA   40 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCch
Confidence            378999999999999999999999997   689999998754

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.58  E-value=4.9e-08  Score=57.16  Aligned_cols=37  Identities=19%  Similarity=0.493  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~---Ga~V~i~~r~~   39 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAE---GAKVAVLDKSA   39 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            68999999999999999999999998   68999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.58  E-value=5.3e-08  Score=56.17  Aligned_cols=37  Identities=14%  Similarity=0.275  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~---G~~V~~~~r~~   39 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKE---GARLVACDIEE   39 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            67999999999999999999999998   68999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.58  E-value=3.5e-08  Score=57.63  Aligned_cols=38  Identities=13%  Similarity=0.262  Sum_probs=34.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~---Ga~V~l~~r~~~   40 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQE---GANVTITGRSSE   40 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            78999999999999999999999998   689999999753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=4.5e-08  Score=56.52  Aligned_cols=37  Identities=11%  Similarity=0.066  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|+++   +++|++.+|++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~---G~~Vi~~~r~~   40 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFARE---GAKVIATDINE   40 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEeCCH
Confidence            78999999999999999999999998   78999999874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.57  E-value=5.9e-08  Score=56.17  Aligned_cols=37  Identities=16%  Similarity=0.114  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~---G~~V~~~~r~~   40 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAE---GAKVVFGDILD   40 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            68999999999999999999999998   68999999975

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=6.2e-08  Score=56.07  Aligned_cols=39  Identities=15%  Similarity=0.181  Sum_probs=35.4

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++||+++||||++.||++++++|+++   |.+|++.+|+++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~---G~~V~l~~r~~~   42 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKL---KSKLVLWDINKH   42 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            378999999999999999999999998   789999999754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=4.5e-08  Score=56.84  Aligned_cols=38  Identities=11%  Similarity=0.112  Sum_probs=34.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   46 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATA---GASVVVSDINAD   46 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            78999999999999999999999997   789999998643

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.56  E-value=6.4e-08  Score=56.28  Aligned_cols=37  Identities=11%  Similarity=0.142  Sum_probs=34.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++|+++||||++.||+++++.|+++   +.+|++.+|+.
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~---Ga~V~~~~r~~   39 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAA---GARVVLADVLD   39 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            68999999999999999999999998   68999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.56  E-value=3.5e-08  Score=57.46  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|++.   +.+|++.+|++.
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~---Ga~V~~~~r~~~   43 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGF---GAVIHTCARNEY   43 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            58999999999999999999999998   689999998743

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.56  E-value=4.4e-08  Score=56.75  Aligned_cols=38  Identities=24%  Similarity=0.331  Sum_probs=34.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|.++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~---Ga~V~~~~r~~~   45 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKS---VSHVICISRTQK   45 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTT---SSEEEEEESSHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEECCHH
Confidence            67899999999999999999999997   789999998643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=6.7e-08  Score=56.06  Aligned_cols=38  Identities=24%  Similarity=0.354  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++||||++.||+++++.|++.   +.+|++.+|++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~---Ga~V~i~~r~~   40 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNS---GARVVICDKDE   40 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            478999999999999999999999998   68999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=5.6e-08  Score=56.08  Aligned_cols=38  Identities=16%  Similarity=0.237  Sum_probs=34.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~---G~~Vv~~~r~~~   39 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAAR---GAKVIGTATSEN   39 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEeCCHH
Confidence            57999999999999999999999998   789999998753

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.52  E-value=6.6e-08  Score=56.56  Aligned_cols=38  Identities=13%  Similarity=0.277  Sum_probs=34.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   39 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKE---GAQVTITGRNED   39 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            67999999999999999999999998   689999998743

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.51  E-value=7.2e-08  Score=56.03  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=34.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|.++||||++.||+++++.|++.   |.+|++.+|+.+
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~---Ga~V~~~~r~~~   40 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFARE---GAKVTITGRHAE   40 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            68999999999999999999999998   789999999753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.51  E-value=1e-07  Score=55.35  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=34.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||++.||+.+++.|++.   +.+|++.+|+.+
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~---Ga~V~i~~r~~~   39 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAE---GAKLSLVDVSSE   39 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            67999999999999999999999998   789999998753

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.51  E-value=1.3e-07  Score=53.97  Aligned_cols=36  Identities=17%  Similarity=0.382  Sum_probs=32.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+|+||||++.||+++++.|++.   +++|++++|++.
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~---G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKN---GYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT---TEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCch
Confidence            357899999999999999999997   789999999754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.49  E-value=6.5e-08  Score=56.09  Aligned_cols=38  Identities=21%  Similarity=0.194  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+++||||++.||+++++.|+++   +.+|++.+|++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~---Ga~V~~~~~~~   40 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGE---GAKVAFSDINE   40 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            478999999999999999999999998   68999998864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.49  E-value=9.8e-08  Score=55.02  Aligned_cols=38  Identities=18%  Similarity=0.223  Sum_probs=33.3

Q ss_pred             ccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+++||||+|  .||+++++.|++.   |.+|++.+|++.
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~---Ga~V~i~~~~~~   45 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEA---GAEVALSYQAER   45 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEeCcHH
Confidence            6899999999987  7999999999998   689988887643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.4e-07  Score=54.51  Aligned_cols=37  Identities=19%  Similarity=0.237  Sum_probs=33.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +||+++||||++.||+++++.|++.   +.+|++.+|+.+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~---Ga~V~i~~r~~~   38 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLK---GAKVALVDWNLE   38 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            6899999999999999999999998   689999999743

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.47  E-value=1.6e-07  Score=53.61  Aligned_cols=35  Identities=14%  Similarity=0.016  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |.|+||||++.||+++++.|++.   |++|++++|+..
T Consensus         2 kVvlITGas~GIG~aiA~~la~~---Ga~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAA---GHQIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECChH
Confidence            57899999999999999999998   789999998754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.45  E-value=1.4e-07  Score=50.98  Aligned_cols=35  Identities=29%  Similarity=0.312  Sum_probs=32.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+||+|.+|+.+++.|.+.   +++|.+.+|+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~---G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATL---GHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTT---TCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            67999999999999999999998   799999999764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.44  E-value=3e-07  Score=52.84  Aligned_cols=40  Identities=30%  Similarity=0.446  Sum_probs=32.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCCCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKKGSS   54 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~~~~   54 (67)
                      .+.+++||||+|.||..++++|.++   +. .|+++.|+..+.+
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~---Ga~~vvl~~R~~~~~~   48 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARR---GAPHLLLVSRSGPDAD   48 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHH---TCSEEEEEESSGGGST
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHC---CCCEEEEEeCCccCHH
Confidence            4679999999999999999999998   44 6888888754333

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.40  E-value=1.4e-07  Score=55.95  Aligned_cols=39  Identities=15%  Similarity=0.159  Sum_probs=34.7

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|+++||||++.||+.+++.|+++   |.+|++.+|+.+
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~---Ga~Vvi~d~~~~   42 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAER---GALVVVNDLGGD   42 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECCCBC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHc---CCEEEEEeCCch
Confidence            378999999999999999999999998   689999887643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.39  E-value=2.5e-07  Score=53.49  Aligned_cols=36  Identities=22%  Similarity=0.292  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|.++||||++.||+++++.|++.   +.+|++.+|+++
T Consensus         2 gKValITGas~GIG~aia~~la~~---Ga~V~i~~r~~~   37 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKE---GLRVFVCARGEE   37 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            688999999999999999999998   689999999743

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.35  E-value=2.5e-07  Score=53.12  Aligned_cols=39  Identities=28%  Similarity=0.439  Sum_probs=31.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..|+|+||||++.||.+++++|++++ ....|++.+|+.+
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G-~~~~Vi~~~R~~~   40 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDK-NIRHIIATARDVE   40 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCT-TCCEEEEEESSGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCC-CCCEEEEEeCCHH
Confidence            35899999999999999999999972 1136888888754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=3.5e-07  Score=52.75  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=35.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -+++|.++||||++.||+++++.|.+....|++|++.+|+.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~   44 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSES   44 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHH
Confidence            367899999999999999999999863234789999999754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.28  E-value=5.9e-07  Score=52.23  Aligned_cols=37  Identities=14%  Similarity=0.047  Sum_probs=33.0

Q ss_pred             hccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++|+++||||+|  .||..+++.|++.   |.+|++.+|+
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~---Ga~Vvi~~~~   43 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAA---GAEILVGTWV   43 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHT---TCEEEEEEEH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEeCc
Confidence            37899999999887  8999999999998   7899888875

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.27  E-value=8.3e-07  Score=50.91  Aligned_cols=39  Identities=13%  Similarity=0.060  Sum_probs=33.1

Q ss_pred             hccCCeEEEEcCCC--hHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         10 FYRDGQILVTGGTG--FMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        10 ~~~~~~ilitGa~G--~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+++||||+|  .||.++++.|.+.   |.+|++.+|+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~---Ga~Vil~~~~~~   43 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQ---GAQLVLTGFDRL   43 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHT---TCEEEEEECSCH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHc---CCEEEEEeCChH
Confidence            47899999999764  5999999999997   689999888643

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.22  E-value=9.6e-07  Score=50.96  Aligned_cols=35  Identities=26%  Similarity=0.208  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |.++||||++.||+++++.|+++   +.+|++.+|+++
T Consensus         2 KValITGas~GIG~aia~~la~~---Ga~V~~~~r~~~   36 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKD---GFAVAIADYNDA   36 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            45799999999999999999998   689999999753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.22  E-value=1.2e-06  Score=47.15  Aligned_cols=35  Identities=23%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+|+|.|| |++|+++++.|.+.   +++|++++|+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~---g~~V~v~dr~~~   36 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDS---GIKVTVACRTLE   36 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTT---TCEEEEEESCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhC---CCEEEEEECChH
Confidence            578999987 99999999999987   689999999754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.13  E-value=2e-06  Score=49.09  Aligned_cols=34  Identities=18%  Similarity=0.276  Sum_probs=31.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++||||++.||+++++.|++.   |.+|++.+|+.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~---G~~Vvi~~r~~~   36 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQ---GFRVVVHYRHSE   36 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHC---CCEEEEEECCch
Confidence            5799999999999999999998   789999998754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.5e-06  Score=50.46  Aligned_cols=37  Identities=32%  Similarity=0.521  Sum_probs=31.1

Q ss_pred             CCeE-EEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQI-LVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~i-litGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +|+| +||||++.||..+++.|+++.  +..|++.+|+.+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~--g~~Vi~~~r~~~   39 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVT   39 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhC--CCEEEEEECCHH
Confidence            4555 899999999999999999862  579999999754

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.09  E-value=1.7e-06  Score=42.30  Aligned_cols=38  Identities=24%  Similarity=0.312  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++.+++|+||+|.+|...++.+...   +.+|++++++++
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~---G~~Vi~~t~s~~   67 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKL---GYQVVAVSGRES   67 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCGG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHc---CCeEEEEECCHH
Confidence            35678999999999999999987776   678999988765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.02  E-value=4.1e-06  Score=48.10  Aligned_cols=33  Identities=18%  Similarity=0.182  Sum_probs=28.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..++||||++.||+++++.|++.   +.+|++.+++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~---Ga~V~i~~~~   34 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKA---GCKVLVNYAR   34 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHT---TCEEEEEESS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            36899999999999999999998   6788876654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3.5e-06  Score=49.33  Aligned_cols=31  Identities=19%  Similarity=0.237  Sum_probs=24.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      |.++||||++.||+++++.|.+.   +.+|+.+.
T Consensus         3 kVvlITGassGIG~a~A~~la~~---Ga~v~~v~   33 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASD---PSQSFKVY   33 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTC---TTCCEEEE
T ss_pred             CEEEEccCCCHHHHHHHHHHHHC---CCCeEEEE
Confidence            56789999999999999999997   44444433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.93  E-value=8e-06  Score=42.72  Aligned_cols=34  Identities=26%  Similarity=0.265  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|.|+ |.+|+++++.|.+.   ++.|++++++++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~---g~~v~vid~d~~   34 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEK---GHDIVLIDIDKD   34 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC---CCCcceecCChh
Confidence            68999998 99999999999987   689999998754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.91  E-value=3e-06  Score=48.77  Aligned_cols=34  Identities=18%  Similarity=-0.014  Sum_probs=30.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++||||++.||+.+++.|.+.   +++|++.+|+.+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~---Ga~V~i~~r~~~   35 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEA---GHTVACHDESFK   35 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHT---TCEEEECCGGGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHC---CCEEEEEECCHH
Confidence            6899999999999999999998   789999998754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.90  E-value=1.4e-05  Score=44.15  Aligned_cols=34  Identities=26%  Similarity=0.529  Sum_probs=27.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      +..+|.|.|||||+|..+++.|.++ |.. ++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~H-P~~-ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANH-PQF-RIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTC-SSE-EEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhC-CCc-eEEEEe
Confidence            3458999999999999999999987 544 555554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.90  E-value=1e-05  Score=46.51  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=29.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++||||++.||+++++.|++.   |.+|++.+++..
T Consensus         4 VAlITGas~GIG~aiA~~la~~---Ga~V~i~~~~~~   37 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAE---GYAVCLHYHRSA   37 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHT---TCEEEEEESSCH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHc---CCEEEEEeCCCH
Confidence            4799999999999999999998   788988877643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=1.6e-05  Score=42.76  Aligned_cols=37  Identities=14%  Similarity=0.258  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~~   50 (67)
                      ++|.|.||||++|+.+++.|+++.+ ...+++++.++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            4799999999999999998887521 134677776654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.89  E-value=1.2e-05  Score=44.59  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=25.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      ++|.|.||||++|..+++.|.++ |.. +|..+.
T Consensus         2 ikVaIvGATGyvG~eLirlL~~H-P~~-ei~~l~   33 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNH-PEA-KITYLS   33 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHC-TTE-EEEEEE
T ss_pred             eEEEEECCCcHHHHHHHHHHHhC-CCc-eEEEee
Confidence            47999999999999999998876 554 554444

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.87  E-value=1.4e-05  Score=45.75  Aligned_cols=34  Identities=18%  Similarity=0.296  Sum_probs=28.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcce-------EEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGA-------IYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~-------v~~~~r~~~   51 (67)
                      .++||||++.||+++++.|.++   |.+       |+..+|+..
T Consensus         3 VvlITGas~GIG~aia~~la~~---G~~~~~~~~~v~~~~r~~~   43 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARA---ARHHPDFEPVLVLSSRTAA   43 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHH---TTTCTTCCEEEEEEESCHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHh---CccccccCcEEEEEeCCHH
Confidence            5899999999999999999998   444       777777643

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=2.1e-05  Score=41.88  Aligned_cols=34  Identities=24%  Similarity=0.278  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+|.|+ |.+|+.+...|.+.   +++|++++|.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~---G~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQ---GHEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHC---CCceEEEEcCHH
Confidence            68999988 99999999999997   789999999765

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.78  E-value=3.8e-05  Score=42.09  Aligned_cols=31  Identities=26%  Similarity=0.536  Sum_probs=24.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM   46 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~   46 (67)
                      ++|.|.|||||+|..+++.|..+ |.. +|..+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~H-P~~-ei~~l   32 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRH-PHM-TITAL   32 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC-TTE-EEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhC-CCC-ceEee
Confidence            48999999999999999998886 444 44433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.76  E-value=2.2e-05  Score=41.74  Aligned_cols=36  Identities=31%  Similarity=0.339  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++|.|+||.|.+|+.+++.|.+.   +++|++.+|++.
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~---G~~V~~~d~~~~   44 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRAS---GYPISILDREDW   44 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTT---TCCEEEECTTCG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHc---CCCcEecccccc
Confidence            468999999999999999999997   789999998754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.76  E-value=4.3e-05  Score=40.83  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~   49 (67)
                      .++|.|.||||++|+.+++.|.++. |. .++..+..+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~-~~l~~~~s~   38 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPL-HRLHLLASA   38 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCC-SCEEEEECT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCc-eEEEEEeec
Confidence            4689999999999999999986532 33 366665543

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.74  E-value=4.1e-05  Score=41.27  Aligned_cols=36  Identities=14%  Similarity=0.296  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCC-CcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFP-DIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~-~~~~v~~~~r~   49 (67)
                      |+|.|.|||||+|+.+++.|++... ...++..++.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            5799999999999999999886421 12356655543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.65  E-value=3.8e-05  Score=41.87  Aligned_cols=36  Identities=25%  Similarity=0.388  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+|||+||+|.+|...++.....   +.+|+..+++++
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~---Ga~Viat~~s~~   59 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKR---GYDVVASTGNRE   59 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHH---TCCEEEEESSSS
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHc---CCceEEEecCHH
Confidence            457999999999999999988887   679999998765

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.53  E-value=8.2e-05  Score=39.97  Aligned_cols=34  Identities=29%  Similarity=0.372  Sum_probs=25.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +|.|.|||||+|..+++.|.++.-...++..++.
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s   36 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS   36 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence            6999999999999999988776201345555543

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.50  E-value=8.7e-05  Score=39.73  Aligned_cols=37  Identities=16%  Similarity=0.316  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+||+|.+|+.++..++.+ +-..++.++++++.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~-~l~~el~L~D~~~~   37 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKE-PFMKDLVLIGREHS   37 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTC-TTCCEEEEEECGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhC-Ccccccccccchhh
Confidence            57999999999999999988876 23368999998753

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00016  Score=38.63  Aligned_cols=37  Identities=19%  Similarity=0.207  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|+|++|.+|++++..|..+.+...++.+++..+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            5899999999999999988765533457899998753

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=6.8e-05  Score=41.23  Aligned_cols=37  Identities=27%  Similarity=0.345  Sum_probs=31.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++.+|||+||+|.+|...++.....   +.+|++..+++.
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~---Ga~Viat~~s~~   67 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKR---GYTVEASTGKAA   67 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCTT
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHc---CCceEEecCchH
Confidence            3568999999999999999988776   678988888765

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=6.3e-05  Score=41.34  Aligned_cols=36  Identities=25%  Similarity=0.344  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.+++|+||+|.+|...++.....   +.+|++++++++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~---Ga~Via~~~~~~   67 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKL---GYQVVAVSGRES   67 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHT---TCCEEEEESCGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHc---CCCeEEEecchh
Confidence            348999999999999999998887   689999998765

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.40  E-value=0.00011  Score=39.82  Aligned_cols=38  Identities=11%  Similarity=0.097  Sum_probs=31.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -++.+|+|+||+|-+|...++.+...   +.+|++++++++
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~---G~~vi~~~~~~~   63 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAM---GLRVLAAASRPE   63 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEEeccccchhhhhhhhccc---cccccccccccc
Confidence            35778999999999999999987776   578999888754

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.0002  Score=35.25  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=31.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|+|+|.|. |-.|..+++.|.++   +.+|++.+.+..
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~---g~~v~~~D~~~~   39 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLAR---GVTPRVMDTRMT   39 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHT---TCCCEEEESSSS
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHC---CCEEEEeeCCcC
Confidence            67899999987 77899999999998   689999998554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.30  E-value=0.00024  Score=37.95  Aligned_cols=33  Identities=27%  Similarity=0.261  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.|. |.+|+.+++.|.+.   +++|++.+|++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~---g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRR---GHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHC---CCEEEEEECCc
Confidence            57889955 99999999999887   68999998874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00028  Score=38.03  Aligned_cols=36  Identities=17%  Similarity=0.044  Sum_probs=30.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+|+|+||+|.+|...++.+...   +.+|+++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~---G~~vi~~~~~~   63 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAY---GLKILGTAGTE   63 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCEEEEEecccccccccccccccc---Ccccccccccc
Confidence            5678999999999999999988776   57888888754

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.25  E-value=0.00031  Score=38.10  Aligned_cols=37  Identities=11%  Similarity=0.047  Sum_probs=31.8

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -++.+++|+||+|.+|...++.....   +.+|+++++++
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~---Ga~vi~~~~~~   64 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLK---GCKVVGAAGSD   64 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHT---TCEEEEEESSH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHcc---CCEEEEeCCCH
Confidence            34789999999999999999988876   67999998764

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00011  Score=39.72  Aligned_cols=37  Identities=16%  Similarity=0.071  Sum_probs=31.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|+|+||+|.+|...++.+...   +.+|+++++++.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~---Ga~Vi~~~~s~~   64 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKAL---GAKLIGTVGTAQ   64 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHH---TCEEEEEESSHH
T ss_pred             CCCEEEEEccccccchHHHHHHHHh---CCeEeecccchH
Confidence            3679999999999999999998877   578999988753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.22  E-value=0.00032  Score=37.09  Aligned_cols=36  Identities=28%  Similarity=0.415  Sum_probs=31.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++++++|.|| |.+|..-++.|++.   +.+|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~---GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPT---GCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGG---TCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHC---CCEEEEEeCC
Confidence            378999999998 88999999999998   6799998754

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.21  E-value=0.00029  Score=41.51  Aligned_cols=35  Identities=14%  Similarity=0.116  Sum_probs=29.5

Q ss_pred             cCCeEEEEc--CCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         12 RDGQILVTG--GTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        12 ~~~~ilitG--a~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|.+||||  ++..||..+++.|.+.   |.+|++..+.
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~---GA~V~i~~~~   37 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKR---NVKIIFGIWP   37 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHT---TCEEEEEECG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHc---CCEEEEEeCc
Confidence            367899999  5679999999999997   7888887664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.21  E-value=0.00039  Score=37.05  Aligned_cols=39  Identities=13%  Similarity=0.091  Sum_probs=31.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.++|.|.|+ |.+|..++..|+.+. -..+|+++|+++.
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~-~~~elvL~D~~~~   41 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQG-IAEEFVIVDVVKD   41 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEeecccc
Confidence            34678999995 999999999999973 2368999998753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.00075  Score=36.74  Aligned_cols=39  Identities=10%  Similarity=0.054  Sum_probs=32.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      +++++++|.|+ |..|+.++..|.+..  ...|+++.|.++.
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g--~~~i~i~nR~~~~   54 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDEF   54 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTT
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcC--CceEeeeccchHH
Confidence            56789999988 677999999999973  5689999998663

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.15  E-value=0.00033  Score=37.53  Aligned_cols=34  Identities=18%  Similarity=0.034  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|.|+|+ |-+|..++..|.++   +++|++++|++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~---G~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALK---GQSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHC---CCEEEEEECCH
Confidence            478999987 99999999999997   78999999964

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.11  E-value=0.00024  Score=36.68  Aligned_cols=33  Identities=21%  Similarity=0.243  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+++|.|+ |-+|+++++.|.+.   +++|++++.++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~---g~~vvvid~d~   33 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRM---GHEVLAVDINE   33 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT---TCCCEEEESCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC---CCeEEEecCcH
Confidence            46778865 89999999999997   68999998764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.10  E-value=0.0014  Score=35.19  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .|+|.|.|+||-||...++-+.+. ++..+|..++-...
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~lsa~~N   39 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERN-LDRYQVIALTANRN   39 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT-GGGEEEEEEEESSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC-CCCcEEEEEEeCCC
Confidence            478999999999999999987774 44568888876543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.09  E-value=0.00052  Score=36.93  Aligned_cols=36  Identities=17%  Similarity=0.185  Sum_probs=30.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+++|+||+|.+|...++.+...   +.+++++++++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~---g~~vi~~~~~~   60 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMI---GARIYTTAGSD   60 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHH---TCEEEEEESSH
T ss_pred             CCCEEEEECCCCCcccccchhhccc---cccceeeeccc
Confidence            4679999999999999999988887   57888887753

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.09  E-value=0.00072  Score=36.21  Aligned_cols=37  Identities=14%  Similarity=0.106  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -.+.+++|.|+ |.+|...++.+...   +.+|+++++++.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~---G~~vi~~~~~~~   62 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAM---GAETYVISRSSR   62 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHH---TCEEEEEESSST
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhc---cccccccccchh
Confidence            34679999986 99999988877776   568999998765

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.07  E-value=0.0008  Score=35.43  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|| |.+|+.++..++.. +-..++.++|.++.
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~-~l~~el~L~Di~~~   36 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEK-QLARELVLLDVVEG   36 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT-TCCSEEEEECSSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhC-CCCceEEEeccccc
Confidence            57999996 99999999888886 33468999998765

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.06  E-value=0.00072  Score=35.94  Aligned_cols=35  Identities=23%  Similarity=0.281  Sum_probs=28.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|.|+||+|.+|++++..|..+ +-..++.+++.++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~-~~~~elvLiDi~~   36 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAH   36 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSS
T ss_pred             eEEEECCCChHHHHHHHHHHhC-CccceEEEEeccc
Confidence            7999999999999999888775 3346899998753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00055  Score=37.80  Aligned_cols=34  Identities=18%  Similarity=0.332  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|| |.+|+.++..++..   |++|++++++++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~---G~~V~l~D~~~~   38 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAAT---GHTVVLVDQTED   38 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSCHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhC---CCcEEEEECChH
Confidence            68999988 99999999999997   789999999764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.95  E-value=0.00069  Score=35.99  Aligned_cols=34  Identities=12%  Similarity=0.095  Sum_probs=28.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +|.|+||+|.+|+.++..++.+ +-..++.+++.+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~-~l~~el~L~Di~   35 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALR-DIADEVVFVDIP   35 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHT-TCCSEEEEECCG
T ss_pred             eEEEECCCCcHHHHHHHHHHhC-CCCCEEEEEecC
Confidence            7899999999999999999886 344688888864

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.92  E-value=0.0038  Score=32.48  Aligned_cols=55  Identities=18%  Similarity=0.220  Sum_probs=37.7

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhcC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNSV   66 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~   66 (67)
                      .++++++.++|.|+ |--+-.-+.+|.+.   ..+|+++.|.+.-......++++...+
T Consensus        29 a~~frgk~V~VvGg-GdsA~e~A~~L~~~---a~~V~li~r~~~~ra~~~~~~~l~~~~   83 (130)
T d1vdca2          29 APIFRNKPLAVIGG-GDSAMEEANFLTKY---GSKVYIIHRRDAFRASKIMQQRALSNP   83 (130)
T ss_dssp             SGGGTTSEEEEECC-SHHHHHHHHHHTTT---SSEEEEECSSSSCCSCHHHHHHHHTCT
T ss_pred             hHHhCCCEEEEEcC-chHHHHHHHHHhCC---CCcEEEEEeccccccchhhhhccccCC
Confidence            35899999999998 55555666666664   479999998765444444555555444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.91  E-value=0.00046  Score=37.84  Aligned_cols=39  Identities=21%  Similarity=0.247  Sum_probs=27.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCC----CcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFP----DIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~----~~~~v~~~~r~~   50 (67)
                      +..+|.|+||+|.||.+++..|+...-    ..-.+++++.+.
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~   65 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER   65 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc
Confidence            345799999999999999999887421    112555555543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.90  E-value=0.0012  Score=35.40  Aligned_cols=37  Identities=30%  Similarity=0.446  Sum_probs=31.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++++|.|+ |-+|+.+++.|...+  ..+|++..|..
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g--~~~i~v~nRt~   58 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRG--VRAVLVANRTY   58 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHC--CSEEEEECSSH
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcC--CcEEEEEcCcH
Confidence            57889999998 999999999999972  35788888874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.89  E-value=0.00099  Score=35.40  Aligned_cols=38  Identities=18%  Similarity=0.345  Sum_probs=30.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++|.|+|+ |.+|+.++..++... -..++.++|+.++
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~-l~~el~L~Di~~~   42 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQG-IADEIVLIDANES   42 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEeeccc
Confidence            3568999997 999999999998873 3468999998654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.89  E-value=0.00038  Score=37.20  Aligned_cols=25  Identities=24%  Similarity=0.371  Sum_probs=22.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      +.++|.|+||+|++|++++..|...
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~   27 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAG   27 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhc
Confidence            3468999999999999999998875

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.81  E-value=0.0021  Score=33.90  Aligned_cols=39  Identities=13%  Similarity=0.216  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSS   54 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~   54 (67)
                      ++|.|+|+ |.+|+.++..++.. +-..++.++|+.++...
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~-~l~~el~L~D~~~~~~~   40 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALR-QTANELVLIDVFKEKAI   40 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHT-TCSSEEEEECCC---CC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeccCCccc
Confidence            36889997 99999999998886 34568999998876433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.80  E-value=0.0018  Score=34.55  Aligned_cols=37  Identities=14%  Similarity=0.145  Sum_probs=29.2

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++|.|+|+ |.+|+.++..+....  ..++++++.++.
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~   42 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKG   42 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccc
Confidence            4578999997 999999988777662  458989887764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0025  Score=34.18  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+||.||...++-+.+. |+..+|..++-...
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~-~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHN-PEHFRVVALVAGKN   38 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHC-TTTEEEEEEEESSC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhC-CCCcEEEEEEecCc
Confidence            57999999999999999988775 55568888876543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.69  E-value=0.0016  Score=34.46  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|+ |.+|..++..++.+. ...++.+++.+++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~   36 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAED   36 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccc
Confidence            68999996 999999999888863 3468999987654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.66  E-value=0.00073  Score=37.05  Aligned_cols=34  Identities=21%  Similarity=0.175  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|.|+ |.+|+.++..++..   |++|++++++++
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~---G~~V~l~D~~~~   38 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASK---GTPILMKDINEH   38 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHT---TCCEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhC---CCeEEEEECCHH
Confidence            57999988 99999999999987   789999999754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.65  E-value=0.0023  Score=34.36  Aligned_cols=37  Identities=24%  Similarity=0.164  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|+|.|+ |..+++++..|.+.   +.+|+++.|+.+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~---g~~i~I~nRt~~   52 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSL---DCAVTITNRTVS   52 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEECSSHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhccc---ceEEEeccchHH
Confidence            56889999986 77799999999887   347999988754

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.012  Score=30.15  Aligned_cols=54  Identities=11%  Similarity=0.149  Sum_probs=35.7

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCCCChHHHHHHHhhc
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKGSSPEERVKNMLNS   65 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~~~~~~~~~~~~~~   65 (67)
                      ..++++++++|.|+ |-.+-.-+..|.+.   ..+|+++.|.+........++++...
T Consensus        25 ~~~~~gk~V~VvGg-G~sA~~~A~~L~~~---a~~V~li~r~~~~~~~~~~~~~~~~~   78 (126)
T d1fl2a2          25 GPLFKGKRVAVIGG-GNSGVEAAIDLAGI---VEHVTLLEFAPEMKADQVLQDKLRSL   78 (126)
T ss_dssp             GGGGBTCEEEEECC-SHHHHHHHHHHHTT---BSEEEEECSSSSCCSCHHHHHHHHTC
T ss_pred             hhhcCCceEEEEeC-CHHHHHHHHhhhcc---CCceEEEecccccccccccccccccc
Confidence            35689999999997 55455555566664   57999999876544444444444443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.57  E-value=0.0018  Score=34.83  Aligned_cols=37  Identities=24%  Similarity=0.409  Sum_probs=30.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|+|.|+ |..+++++..|.+.+  ..+|+++.|+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g--~~~I~I~nR~~~   52 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSG--FEKLKIYARNVK   52 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTT--CCCEEEECSCHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCC--CCEEEEecccHH
Confidence            5788999977 777999999999872  358999988754

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.55  E-value=0.0026  Score=33.75  Aligned_cols=36  Identities=14%  Similarity=0.129  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|+ |.+|..++..|+.+. -..++.+++.++.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~   37 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQG-VADDYVFIDANEA   37 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcC-CCceEEEEecccc
Confidence            68999995 999999999998873 2358989887644

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.53  E-value=0.00055  Score=36.54  Aligned_cols=24  Identities=25%  Similarity=0.321  Sum_probs=21.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      .++|.|+||+|.+|++++..|+..
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~   26 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNG   26 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHH
Confidence            468999999999999999998764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.0024  Score=34.40  Aligned_cols=39  Identities=18%  Similarity=0.133  Sum_probs=30.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++..+|.|+|+ |.+|..++..|... +-..++.++|++++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~-~l~~elvL~D~~~~   55 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLK-GLADELALVDADTD   55 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTT-TSCSEEEEECSCHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhc-CCCCEEEEEeCCch
Confidence            44567999996 99999999988886 33468999987643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.48  E-value=0.0022  Score=33.73  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.++|+ |-+|+++++.|++..  .++|++.+|+++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~--~~~i~v~~r~~~   35 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQG--GYRIYIANRGAE   35 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHC--SCEEEEECSSHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCC--CCcEEEEeCChh
Confidence            57888865 999999999999873  379999988753

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.41  E-value=0.0034  Score=33.74  Aligned_cols=37  Identities=8%  Similarity=0.131  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|+|+|+ |-+|...++.+...+  ..+|+++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~G--a~~Vi~~~~~~~   64 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLG--AENVIVIAGSPN   64 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTT--BSEEEEEESCHH
T ss_pred             CCCEEEEECC-Cccchhheecccccc--cccccccccccc
Confidence            4679999986 899999999888762  248999988643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.38  E-value=0.0083  Score=30.19  Aligned_cols=38  Identities=21%  Similarity=0.368  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|.|| |++|-.++..|......+.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468899977 99999999887766444568999988653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.37  E-value=0.0047  Score=32.68  Aligned_cols=36  Identities=33%  Similarity=0.469  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|+|.| .|.+|..+++.|.+.+.. .+|+..+++++
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~-~~I~~~D~~~~   37 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFK-GKIYGYDINPE   37 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCC-SEEEEECSCHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCC-eEEEEEECChH
Confidence            4699996 699999999999887322 37888888643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.35  E-value=0.01  Score=32.10  Aligned_cols=37  Identities=19%  Similarity=0.152  Sum_probs=29.5

Q ss_pred             cCCeEEE-EcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILV-TGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ili-tGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++| +||+|.+|...++.....   +.+|+++.|.++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~---Ga~vI~~v~~~~   65 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLL---NFNSISVIRDRP   65 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHH---TCEEEEEECCCT
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhc---CCeEEEEEeccc
Confidence            3456666 699999999999988887   578888887655

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.35  E-value=0.0071  Score=30.81  Aligned_cols=35  Identities=14%  Similarity=0.264  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|.++   +.+|+++.+.+.
T Consensus        30 ~~~vvII-GgG~iG~E~A~~l~~~---g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIV-GGGVIGLELAATARTA---GVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CCeEEEE-CcchhHHHHHHHhhcc---cceEEEEeeccc
Confidence            5677776 6799999999999987   689999998764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.35  E-value=0.0019  Score=34.31  Aligned_cols=37  Identities=16%  Similarity=0.127  Sum_probs=30.4

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|++|-+|...++.+....  ...|++.++++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g--~~~V~~~~~~~   63 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVS--GATIIGVDVRE   63 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHT--CCEEEEEESSH
T ss_pred             CCCEEEEEeccccceeeeeecccccc--cccccccccch
Confidence            46789999999999999999888772  35888888764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.0033  Score=33.42  Aligned_cols=37  Identities=14%  Similarity=0.056  Sum_probs=28.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -.+.+|+|.|+ |.+|...++.+...   +.+++++++++.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~---Ga~~i~~~~~~~   65 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAM---GAHVVAFTTSEA   65 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESSGG
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcc---cccchhhccchh
Confidence            34678999986 88999999887766   567778887654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=96.31  E-value=0.0071  Score=31.37  Aligned_cols=36  Identities=14%  Similarity=0.199  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+|. |.|++|-.++..|.+..++ .+|+++.+.+
T Consensus         2 gkrivIv-GgG~~G~e~A~~l~~~~~~-~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVV-GGGTGGATAAKYIKLADPS-IEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHHHCTT-SEEEEECSCS
T ss_pred             CCcEEEE-CccHHHHHHHHHHHHcCCC-CcEEEEECCC
Confidence            6889888 5699999999999998543 3888888765

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.29  E-value=0.0055  Score=32.09  Aligned_cols=36  Identities=25%  Similarity=0.125  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|+|+ |.+|+.++..++.+. -..++.++|.++.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~Di~~~   36 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKK   36 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEecccc
Confidence            57999996 999999998888863 3468999988753

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.27  E-value=0.0058  Score=32.69  Aligned_cols=37  Identities=24%  Similarity=0.319  Sum_probs=24.5

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~~   50 (67)
                      +..++.|.| +|.+|+.++..+++..|.. +++++ +|+.
T Consensus         3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~-el~avas~~~   40 (157)
T d1nvmb1           3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYL-EMGAMVGIDA   40 (157)
T ss_dssp             SCEEEEEEC-CSHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence            345899999 9999997655555554443 56555 4554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.26  E-value=0.003  Score=35.54  Aligned_cols=38  Identities=21%  Similarity=0.359  Sum_probs=31.4

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +.+++++|+|.| .|.+|++++..|...+  ..+++++|.+
T Consensus        26 ~kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D   63 (247)
T d1jw9b_          26 EALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFD   63 (247)
T ss_dssp             HHHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCC
T ss_pred             HHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCc
Confidence            456778999997 6778999999999983  5789998864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.24  E-value=0.0038  Score=34.27  Aligned_cols=32  Identities=16%  Similarity=0.134  Sum_probs=28.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+|.|. |.||+|..++..|.+.   +++|+++|.+
T Consensus         1 MkI~Vi-GlG~vGl~~a~~la~~---g~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIF-GLGYVGAVCAGCLSAR---GHEVIGVDVS   32 (202)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHT---TCEEEEECSC
T ss_pred             CEEEEE-CCCHhHHHHHHHHHhC---CCcEEEEeCC
Confidence            578888 8999999999999987   7899999875

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.24  E-value=0.0063  Score=31.93  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+|+ |.+|..++..|....  ..++.+++..++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~   36 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEG   36 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccc
Confidence            47899996 999999998887762  457888887654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.20  E-value=0.0052  Score=32.41  Aligned_cols=36  Identities=11%  Similarity=0.036  Sum_probs=28.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -.+.+++|.|+ |-+|...++.+...   +.+|+++++++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~---G~~Vi~~~~~~   61 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAM---GLHVAAIDIDD   61 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHc---CCccceecchh
Confidence            34678999876 99999988877665   57899998864

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.15  E-value=0.0052  Score=32.44  Aligned_cols=36  Identities=19%  Similarity=0.114  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+|.|+|+ |.+|++++..++.+. -..++.+++.++.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~-l~~ElvL~D~~~~   37 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKE   37 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccc
Confidence            36899996 999999999998863 3468999988754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=96.15  E-value=0.004  Score=34.16  Aligned_cols=33  Identities=18%  Similarity=0.248  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+|+|| |..|-..+..|.++   +++|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~---G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSR---GTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTT---TCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhC---CCCEEEEecCC
Confidence            57899977 99999999999887   68999998753

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.15  E-value=0.023  Score=28.25  Aligned_cols=37  Identities=22%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|.|+ |-+|..-++.|++.   +..|++++....
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~---ga~v~v~~~~~~   46 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEA---GARLTVNALTFI   46 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHT---TBEEEEEESSCC
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHC---CCeEEEEeccCC
Confidence            67899999954 67999999999998   678888876543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.15  E-value=0.011  Score=30.11  Aligned_cols=36  Identities=11%  Similarity=0.278  Sum_probs=29.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++|. |.|++|..++..|.+.   +.+|+++.+.+.
T Consensus        29 ~~k~vvVi-GgG~iG~E~A~~l~~~---g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVI-GSGYIGIEAAEAFAKA---GKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CCCEEEEE-CChHHHHHHHHHhhcc---ceEEEEEEecCc
Confidence            35678777 6799999999999997   689999988653

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.12  E-value=0.0048  Score=33.24  Aligned_cols=37  Identities=22%  Similarity=0.234  Sum_probs=29.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++++|.|+ |..++.++..|.+.   +.+|+++.|+.+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~---~~~i~I~nR~~~   52 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQA---QQNIVLANRTFS   52 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHT---TCEEEEEESSHH
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHccc---CceeeeccchHH
Confidence            56789999866 66699999998875   468999999854

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.08  E-value=0.0066  Score=32.09  Aligned_cols=36  Identities=17%  Similarity=0.125  Sum_probs=28.6

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.+++|+| +|.+|...++.+...   +.+|+++++++
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~---Ga~vi~v~~~~   60 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAY---GAFVVCTARSP   60 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEEESCH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhh---cccccccchHH
Confidence            3467899996 799999998877665   56899998864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.07  E-value=0.0069  Score=31.41  Aligned_cols=23  Identities=17%  Similarity=0.193  Sum_probs=19.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhh
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      |+|.|.|++|-.|+.+.+.+.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~   23 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEK   23 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHhcC
Confidence            57999999999999988877665

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.04  E-value=0.011  Score=29.52  Aligned_cols=34  Identities=18%  Similarity=0.219  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|. |.|++|-.++..|.+.   +.+|+++.|.+.
T Consensus        23 ~~v~Ii-GgG~ig~E~A~~l~~~---G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVI-GGGYIGIELGTAYANF---GTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CeEEEE-CCCccceeeeeeeccc---ccEEEEEEecce
Confidence            677777 5699999999999997   689999998754

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.012  Score=33.11  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=31.3

Q ss_pred             ccCCeEEEEcC----------------CChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGG----------------TGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa----------------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +++++||||+|                ||..|.++++++..+   |+.|+++..+.
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~---Ga~V~li~g~~   56 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR---GANVTLVSGPV   56 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT---TCEEEEEECSC
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHc---CCchhhhhccc
Confidence            67888888854                799999999999998   78999987643

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.92  E-value=0.01  Score=31.93  Aligned_cols=39  Identities=15%  Similarity=0.099  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ....+|.|+|+ |.+|+.++..+..++ -..++.++|++++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~-l~~ElvLiD~~~~   56 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKS-LADELALVDVLED   56 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSCHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcC-CCcEEEEEEeccc
Confidence            44568999996 999999999998873 3468999988643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.89  E-value=0.012  Score=29.92  Aligned_cols=35  Identities=11%  Similarity=0.161  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|.+.   +.+|+++.+.+.
T Consensus        23 p~~~vIi-G~G~ig~E~A~~l~~l---G~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTII-GGGIIGLEMGSVYSRL---GSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             CCeEEEE-CCCchHHHHHHHHHhh---CcceeEEEeccc
Confidence            3678887 5699999999999997   789999998653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.84  E-value=0.0058  Score=32.34  Aligned_cols=34  Identities=24%  Similarity=0.350  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.+. |.|.+|+.+++.|++.   +++|++.+|+++
T Consensus         1 MkIgiI-GlG~MG~~~A~~L~~~---G~~V~~~d~~~~   34 (161)
T d1vpda2           1 MKVGFI-GLGIMGKPMSKNLLKA---GYSLVVSDRNPE   34 (161)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHT---TCEEEEECSCHH
T ss_pred             CEEEEE-ehhHHHHHHHHHHHHC---CCeEEEEeCCcc
Confidence            568788 5699999999999997   789999998753

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=95.82  E-value=0.037  Score=28.20  Aligned_cols=40  Identities=23%  Similarity=0.232  Sum_probs=31.8

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKKG   52 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~~   52 (67)
                      .++++++++|.|+ |-.+-..+..|.+.   ..+|+++.|.+..
T Consensus        23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~---a~~V~li~r~~~~   62 (126)
T d1trba2          23 FFYRNQKVAVIGG-GNTAVEEALYLSNI---ASEVHLIHRRDGF   62 (126)
T ss_dssp             GGGTTSEEEEECS-SHHHHHHHHHHTTT---SSEEEEECSSSSC
T ss_pred             HHhCCCEEEEECC-CHHHHHHHHHHhhc---CCcEEEEeecccc
Confidence            4679999999988 77777777777765   5799999997653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.81  E-value=0.014  Score=30.92  Aligned_cols=35  Identities=17%  Similarity=0.517  Sum_probs=27.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+|.|.|+ |.+|+.++..+...  ...++.++++.+.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~--~l~el~L~Di~~~   38 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQK--NLGDVVLFDIVKN   38 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHT--TCCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhC--CCCeEEEEeccCC
Confidence            57999995 99999999766665  2468999998764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.80  E-value=0.0038  Score=38.29  Aligned_cols=39  Identities=26%  Similarity=0.310  Sum_probs=31.1

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+++++|+|.|+.| +|..+++.|...+  ..+|+++|.+.
T Consensus        33 ~~l~~~kVlvvG~Gg-lG~ei~k~L~~~G--vg~i~lvD~D~   71 (426)
T d1yovb1          33 FLLDTCKVLVIGAGG-LGCELLKNLALSG--FRQIHVIDMDT   71 (426)
T ss_dssp             HHHHHCCEEEECSST-THHHHHHHHHTTT--CCCEEEECCCB
T ss_pred             HHHhcCeEEEECCCH-HHHHHHHHHHHcC--CCeEEEEECCC
Confidence            446678999998855 8999999999873  56888888753

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0053  Score=33.26  Aligned_cols=34  Identities=15%  Similarity=0.051  Sum_probs=25.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+|+|+||+|.+|...++.+....  ...|+..+.+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~G--a~~vi~~~~~   65 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLG--CSRVVGICGT   65 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTT--CSEEEEEESS
T ss_pred             CEEEEECCCchhhHHHHHHHHHcC--Ccceecccch
Confidence            679999999999999999887761  2355555543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.76  E-value=0.006  Score=32.52  Aligned_cols=37  Identities=19%  Similarity=0.068  Sum_probs=29.1

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|.|+ |.+|...+..+...  .+.+|+++++++.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~--g~~~Vi~~~~~~~   64 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAA--GAARIIGVDINKD   64 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGG
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHc--CCceEEeecCcHH
Confidence            4678999999 55888888888886  2468999888764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.73  E-value=0.017  Score=29.18  Aligned_cols=35  Identities=23%  Similarity=0.411  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|.+.   +.+|+++.|.+.
T Consensus        32 ~~~vvIi-GgG~iG~E~A~~l~~~---g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIII-GGGFIGLELAGNLAEA---GYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEE-ECSHHHHHHHHHHHHT---TCEEEEECSSSC
T ss_pred             CCcEEEE-CCcHHHHHHHHHhhcc---cceEEEEecccc
Confidence            3567776 6799999999999987   689999998754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.72  E-value=0.011  Score=30.88  Aligned_cols=34  Identities=12%  Similarity=0.098  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|. |.|.+|+.+++.|+++   +++|++.++.+.
T Consensus         1 MkIgiI-G~G~mG~~ia~~l~~~---g~~v~~~~~~~~   34 (152)
T d1i36a2           1 LRVGFI-GFGEVAQTLASRLRSR---GVEVVTSLEGRS   34 (152)
T ss_dssp             CEEEEE-SCSHHHHHHHHHHHHT---TCEEEECCTTCC
T ss_pred             CEEEEE-cHHHHHHHHHHHHHHC---CCeEEEEcCchh
Confidence            578888 5699999999999997   678888776554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.0043  Score=33.40  Aligned_cols=36  Identities=22%  Similarity=0.336  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+|+|.|++|-.|+.+++.+.+. ++..-+-+++|.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~   39 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALERE   39 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecc
Confidence            358999999999999999999886 233333445554

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.70  E-value=0.015  Score=30.38  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=24.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      +|.|.|++|-.|+.+++.+.+. ++..-+-.+++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~d~~   34 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAELDAG   34 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEECTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC
Confidence            5899999999999999988775 333334445543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.68  E-value=0.0089  Score=32.17  Aligned_cols=37  Identities=19%  Similarity=0.086  Sum_probs=30.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|+|.|+ |.+|...++.+...  ...+|++++++++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~--G~~~Vi~vd~~~~   65 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSA--GASRIIGIDLNKD   65 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHT--TCSEEEEECSCGG
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHc--CCceEEEecCcHH
Confidence            4678999975 99999999998886  2368999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.67  E-value=0.017  Score=28.98  Aligned_cols=34  Identities=15%  Similarity=0.132  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|. |.|++|-.++..|.+.   +.+|+++.|.+.
T Consensus        22 ~~vvIi-GgG~ig~E~A~~l~~~---G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVV-GAGYIGVELGGVINGL---GAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             CEEEEE-CCChhhHHHHHHhhcc---ccEEEEEeecch
Confidence            567776 6799999999999887   689999998753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.66  E-value=0.022  Score=28.65  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|+||-.++..|.+.   +.+|+++.+.+.
T Consensus        22 p~~i~Ii-G~G~ig~E~A~~l~~~---G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVI-GAGVIGLELGSVWARL---GAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSSS
T ss_pred             CCeEEEE-CCChHHHHHHHHHHHc---CCceEEEEeecc
Confidence            3678888 5699999999999997   789999998654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.65  E-value=0.018  Score=29.59  Aligned_cols=36  Identities=14%  Similarity=0.368  Sum_probs=30.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++++|. |+|++|-.++..|.+.   +.+|+++.+.+.
T Consensus        34 ~~k~v~VI-GgG~iG~E~A~~l~~~---g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVI-GGGYIGLEVAATAIKA---NMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             cCCEEEEE-CCchHHHHHHHHHHhh---Ccceeeeeeccc
Confidence            35788888 6799999999999997   689999998654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.55  E-value=0.017  Score=33.50  Aligned_cols=35  Identities=23%  Similarity=0.430  Sum_probs=29.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|+|. |+|+.|...+..|.+.   +++|.++.++.
T Consensus         1 k~KKI~II-GaG~sGL~aA~~L~k~---G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIV-GAGFSGAVIGRQLAEK---GHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEE-CCSHHHHHHHHHHHTT---TCEEEEEESSS
T ss_pred             CCCEEEEE-CCcHHHHHHHHHHHhC---CCCEEEEECCC
Confidence            46788888 5799999999998886   68999998764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.55  E-value=0.02  Score=29.04  Aligned_cols=33  Identities=24%  Similarity=0.256  Sum_probs=27.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++++|. |.|+||-.++..|.+.   +.+|+++.|++
T Consensus        21 ~~vvII-GgG~iG~E~A~~l~~l---G~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVV-GASYVALECAGFLAGI---GLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEE-CCSHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred             CeEEEE-CCCccHHHHHHHHhhc---CCeEEEEEech
Confidence            467777 6799999999999998   67899998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.54  E-value=0.012  Score=31.49  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=28.5

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|.|+ |..++.++..|.+.    .+|+++.|+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~----~~i~I~nR~~~   51 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKD----NNIIIANRTVE   51 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSS----SEEEEECSSHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHccc----cceeeehhhhh
Confidence            67899999966 55799999888653    48999999754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.53  E-value=0.019  Score=28.96  Aligned_cols=35  Identities=26%  Similarity=0.424  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|...   +.+|+++.|.+.
T Consensus        22 p~~v~Ii-GgG~iG~E~A~~l~~~---g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIV-GSGYIAVELINVIKRL---GIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHTT---TCEEEEECSSSS
T ss_pred             CCEEEEE-CCchHHHHHHHHHHhc---cccceeeehhcc
Confidence            4678777 5699999999999887   689999998653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.51  E-value=0.017  Score=32.06  Aligned_cols=36  Identities=19%  Similarity=0.196  Sum_probs=30.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++++++.|-| -|-+|+++++.|.+.   |.+|++.+.+
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~---Gakvvv~d~d   59 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEA---GAQLLVADTD   59 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHC---CCEEEEecch
Confidence            36789999885 899999999999997   6888877654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.43  E-value=0.025  Score=28.20  Aligned_cols=34  Identities=15%  Similarity=0.258  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|. |.|++|-.++..|.+.   +.+|+++.+.+.
T Consensus        22 ~~vvIi-GgG~~G~E~A~~l~~~---g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVV-GGGYIGLELGIAYRKL---GAQVSVVEARER   55 (115)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred             CeEEEE-CCCHHHHHHHHHHhhc---ccceEEEeeecc
Confidence            567666 6799999999999998   689999988654

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.42  E-value=0.017  Score=29.83  Aligned_cols=39  Identities=21%  Similarity=0.277  Sum_probs=31.1

Q ss_pred             hhccCCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490          9 DFYRDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus         9 ~~~~~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++.++|.|.|++   +..|..+++.|.+..  ..+|+.+...
T Consensus         4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVnP~   45 (129)
T d2csua1           4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK   45 (129)
T ss_dssp             TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS
T ss_pred             HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEeccC
Confidence            46788999999998   899999999987642  2588887654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.024  Score=28.71  Aligned_cols=34  Identities=21%  Similarity=0.391  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++++|. |.|++|-.++..|...   +.+|+++.|.+.
T Consensus        23 k~vvIv-GgG~iG~E~A~~l~~~---G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIV-GAGYIAVEMAGILSAL---GSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             CEEEEE-cCCccHHHHHHHHhcC---CcEEEEEeeccc
Confidence            678887 5689999999999997   689999999753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.35  E-value=0.01  Score=31.69  Aligned_cols=34  Identities=21%  Similarity=0.170  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|-|+ |.|.+|..+++.|++.   +++|++.+|+++
T Consensus         2 MkIGvI-GlG~MG~~ma~~L~~~---G~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVV-GLGVMGANLALNIAEK---GFKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSHH
T ss_pred             CEEEEE-eehHHHHHHHHHHHHC---CCeEEEEECCHH
Confidence            567777 7899999999999997   689999998654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.35  E-value=0.026  Score=30.56  Aligned_cols=34  Identities=26%  Similarity=0.338  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|+|+ |.|..|-..+..|.++   +++|++++|..
T Consensus         6 ~~kVvVI-GaGiaGl~~A~~L~~~---G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVL-GSGVIGLSSALILARK---GYSVHILARDL   39 (268)
T ss_dssp             SCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEEESSC
T ss_pred             CCcEEEE-CccHHHHHHHHHHHHC---CCCEEEEeCCC
Confidence            4578888 5699999999999997   68999999854

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.34  E-value=0.031  Score=27.83  Aligned_cols=36  Identities=11%  Similarity=0.012  Sum_probs=29.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+++++|. |.|++|-.++..|...   +.+|+++.|.+.
T Consensus        21 ~~~~vvVv-GgG~ig~E~A~~l~~~---g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVV-GGSKTAVEYGCFFNAT---GRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSCT
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHhc---chhheEeeccch
Confidence            35778776 6799999999999887   679999998654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.33  E-value=0.01  Score=31.79  Aligned_cols=38  Identities=18%  Similarity=-0.054  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -.+.+++|.|+ |.+|...++.+....  ..+|+++++++.
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G--~~~Vi~~d~~~~   63 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAG--ASRIIGVGTHKD   63 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSCGG
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcC--CceeeccCChHH
Confidence            34678999985 999999999988872  358999888654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.32  E-value=0.014  Score=31.41  Aligned_cols=33  Identities=21%  Similarity=0.202  Sum_probs=27.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.|+ |-.|..++..|.+.   +++|++..|..
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~---g~~V~l~~r~~   33 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDN---GNEVRIWGTEF   33 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHH---CCEEEEECCGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHC---CCEEEEEEecc
Confidence            67888865 88899999999987   68999988753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.23  E-value=0.021  Score=28.90  Aligned_cols=35  Identities=14%  Similarity=0.219  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|.+.   +.+|+++.|.+.
T Consensus        25 p~~~vii-G~G~iglE~A~~~~~~---G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVI-GAGYIGLEMGSVWGRI---GSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEES-CCSHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred             CCeEEEE-ccchHHHHHHHHHHhc---CCeEEEEEEccc
Confidence            3577777 5799999999999998   689999998764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.21  E-value=0.019  Score=30.10  Aligned_cols=34  Identities=21%  Similarity=0.214  Sum_probs=28.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.+. |+|-+|+.+++.|++.   +++|++.+|+++
T Consensus         1 MkIg~I-G~G~mG~al~~~l~~~---~~~i~v~~r~~~   34 (152)
T d2ahra2           1 MKIGII-GVGKMASAIIKGLKQT---PHELIISGSSLE   34 (152)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHTTS---SCEEEEECSSHH
T ss_pred             CEEEEE-eccHHHHHHHHHHHhC---CCeEEEEcChHH
Confidence            467777 7899999999999986   579999888643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.022  Score=30.05  Aligned_cols=36  Identities=14%  Similarity=0.110  Sum_probs=28.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|+ |.+|...++.+...+  ..+|+++++++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G--~~~Vi~~d~~~   61 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMG--AAQVVVTDLSA   61 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEESCH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcC--CceEEeccCCH
Confidence            4678999976 999999998887762  34799988764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.026  Score=29.30  Aligned_cols=33  Identities=12%  Similarity=0.124  Sum_probs=26.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++|.|. |-+|.++++.|.+.   +..|++++.+++
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~---~~~v~vId~d~~   37 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQR---GQNVTVISNLPE   37 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHT---TCCEEEEECCCH
T ss_pred             EEEEECC-CHHHHHHHHHHHHc---CCCEEEEeccch
Confidence            4777776 78899999999997   578888887653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.17  E-value=0.032  Score=29.60  Aligned_cols=37  Identities=19%  Similarity=0.415  Sum_probs=25.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++.|.| +|++|+..++.+.+. ++..-|-+.++++.
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~-~~~elvav~~~~~~   39 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQ-PDMDLVGIFSRRAT   39 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTC-SSEEEEEEEESSSC
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhC-CCcEEEEEEecccc
Confidence            45788887 699999999998874 44434445555543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.16  E-value=0.017  Score=30.45  Aligned_cols=37  Identities=19%  Similarity=-0.020  Sum_probs=27.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+++|.|+ |.+|...++.+....  ...|++.++++.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G--~~~vi~~~~~~~   64 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAG--ASRIIGVDINKD   64 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSCGG
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHh--cCceEEEcccHH
Confidence            4678999987 568999998888872  357777777644

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.15  E-value=0.029  Score=29.12  Aligned_cols=35  Identities=20%  Similarity=0.217  Sum_probs=28.2

Q ss_pred             CeEEEE-cCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVT-GGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilit-Ga~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++|. .+.||+|..+++.|.++   +.+|+++.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~---G~~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATA---GHEVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHT---TCEEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHc---CCeEEEEecCCc
Confidence            344444 47799999999999998   789999998754

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.10  E-value=0.011  Score=31.49  Aligned_cols=36  Identities=11%  Similarity=-0.027  Sum_probs=27.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|+ |.+|...++.+....  ...|++.++++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g--~~~v~~~~~~~   63 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCG--ASIIIAVDIVE   63 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHT--CSEEEEEESCH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccc--cceeeeeccHH
Confidence            4678999987 999999998887762  34666666643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.08  E-value=0.022  Score=29.77  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         11 YRDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        11 ~~~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+.++|.|.|++   +-.|..+++.|++.   +++|+.+...
T Consensus        17 ~~~ksIAVVGaS~~~~~~g~~v~~~L~~~---g~~v~pVnP~   55 (139)
T d2d59a1          17 TRYKKIALVGASPKPERDANIVMKYLLEH---GYDVYPVNPK   55 (139)
T ss_dssp             HHCCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTT
T ss_pred             hcCCeEEEEeecCCCCCchHHHHHHHHHC---CCEEEEECCc
Confidence            367899999998   78999999999997   5788887654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.00  E-value=0.0073  Score=32.46  Aligned_cols=37  Identities=19%  Similarity=0.073  Sum_probs=28.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -.+.+|+|.|+ |.+|...++.+...+  ..+|+++++++
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~G--a~~Vi~~d~~~   62 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRG--AGRIIGVGSRP   62 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTT--CSCEEEECCCH
T ss_pred             CCCCEEEEEcC-Ccchhhhhhhhhccc--ccccccccchh
Confidence            34678999975 999999888887762  24788888764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.00  E-value=0.042  Score=29.75  Aligned_cols=37  Identities=19%  Similarity=0.154  Sum_probs=31.0

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|.| .|-||+.+++.+...   +.+|+..+|.+.
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~---g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAAL---GAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             ccCceEEEec-cccccccceeeeecc---cccccccccccc
Confidence            6788999985 577999999999887   679999998654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.00  E-value=0.03  Score=30.37  Aligned_cols=34  Identities=18%  Similarity=0.140  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+|+ |+|.-|-..+.+|.+.   +++|+++.+.+
T Consensus         1 ~KkV~II-GaG~aGL~aA~~La~~---G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVI-GAGVSGLAAAYKLKIH---GLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHTT---SCEEEEECSSS
T ss_pred             CCEEEEE-CcCHHHHHHHHHHHhC---CCCEEEEeCCC
Confidence            4788888 6689999999998887   68999998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.034  Score=30.08  Aligned_cols=37  Identities=16%  Similarity=0.112  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.+|+++|.|.+..+|+-+...|.++   +..|++.....
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~---gatVt~~h~~t   71 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLA---GCTTTVTHRFT   71 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTT---TCEEEEECSSC
T ss_pred             cccceEEEEeccccccHHHHHHHHHh---hcccccccccc
Confidence            67899999999999999998888876   57888776543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.92  E-value=0.042  Score=27.94  Aligned_cols=35  Identities=14%  Similarity=0.183  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|+||-.++..|...   +.+|+++.+.+.
T Consensus        26 p~~vvIi-GgG~IG~E~A~~~~~~---G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLII-GGGIIGLEMGTVYSTL---GSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEE-SCSHHHHHHHHHHHHH---TCEEEEECSSSS
T ss_pred             CCeEEEE-CCCHHHHHHHHHhhcC---CCEEEEEEeecc
Confidence            3577777 5699999999999998   689999988653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.035  Score=30.07  Aligned_cols=38  Identities=16%  Similarity=0.198  Sum_probs=32.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++++++|.|.+..+|+-+...|.++   +..|+.......
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~---gatVt~~~~~t~   74 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWN---NATVTTCHSKTA   74 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHT---TCEEEEECTTCS
T ss_pred             cccceEEEEecCCccchHHHHHHHhc---cCceEEEecccc
Confidence            67899999999999999999999887   578888766543

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.87  E-value=0.048  Score=29.08  Aligned_cols=35  Identities=23%  Similarity=0.373  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+|.| .|++|-.++..|.+..++ .+|+++.|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~-~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPD-AEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTT-SEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCC-CeEEEEeCCC
Confidence            5788885 569999999999887543 4888888754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.78  E-value=0.023  Score=29.66  Aligned_cols=36  Identities=8%  Similarity=-0.032  Sum_probs=27.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -.+.+++|.|+ |-+|...++.+...   +.+|+++++++
T Consensus        26 ~~g~~vlv~G~-G~iG~~a~~~a~~~---g~~v~~~~~~~   61 (168)
T d1rjwa2          26 KPGEWVAIYGI-GGLGHVAVQYAKAM---GLNVVAVDIGD   61 (168)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             CCCCEEEEeec-ccchhhhhHHHhcC---CCeEeccCCCH
Confidence            34678999865 88999888777765   56888887754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.72  E-value=0.031  Score=29.43  Aligned_cols=34  Identities=24%  Similarity=0.281  Sum_probs=28.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.+. |.|.+|+.+++.|++.   +++|++.+|++.
T Consensus         2 ~kIg~I-GlG~MG~~iA~~L~~~---g~~v~~~d~~~~   35 (162)
T d3cuma2           2 KQIAFI-GLGHMGAPMATNLLKA---GYLLNVFDLVQS   35 (162)
T ss_dssp             CEEEEE-CCSTTHHHHHHHHHHT---TCEEEEECSSHH
T ss_pred             CEEEEE-EEHHHHHHHHHHHHHC---CCeEEEEECchh
Confidence            467777 6799999999999997   689999988743

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.70  E-value=0.023  Score=30.68  Aligned_cols=32  Identities=25%  Similarity=0.212  Sum_probs=25.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|.|.| .||+|..++..| +.   +++|+.+|-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~---g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SL---QNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TT---TSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HC---CCcEEEEECCH
Confidence            6789995 899999987544 44   68999998653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.69  E-value=0.051  Score=29.80  Aligned_cols=37  Identities=16%  Similarity=0.129  Sum_probs=30.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|. |.|-||+.+++.+...   +.+|++.++...
T Consensus        43 l~~ktvgIi-G~G~IG~~va~~l~~f---g~~v~~~d~~~~   79 (199)
T d1dxya1          43 LGQQTVGVM-GTGHIGQVAIKLFKGF---GAKVIAYDPYPM   79 (199)
T ss_dssp             GGGSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             ccceeeeee-eccccccccccccccc---ceeeeccCCccc
Confidence            456788887 6799999999999887   679999998644

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.033  Score=30.08  Aligned_cols=37  Identities=22%  Similarity=0.126  Sum_probs=31.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+|+++|. |.|.+|+-+++.+...   +.+|++.+..|
T Consensus        21 ~l~Gk~v~V~-GyG~iG~g~A~~~rg~---G~~V~v~e~dp   57 (163)
T d1li4a1          21 MIAGKVAVVA-GYGDVGKGCAQALRGF---GARVIITEIDP   57 (163)
T ss_dssp             CCTTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSCH
T ss_pred             eecCCEEEEe-ccccccHHHHHHHHhC---CCeeEeeeccc
Confidence            4678888888 6889999999999998   68999987764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.53  E-value=0.048  Score=29.95  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.++++.|. |.|-||+.+++.+...   +.+|++.++..
T Consensus        41 l~gk~vgIi-G~G~IG~~va~~l~~f---g~~V~~~d~~~   76 (197)
T d1j4aa1          41 VRDQVVGVV-GTGHIGQVFMQIMEGF---GAKVITYDIFR   76 (197)
T ss_dssp             GGGSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSC
T ss_pred             ccCCeEEEe-cccccchhHHHhHhhh---cccccccCccc
Confidence            567899888 6899999999999876   57998888654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.51  E-value=0.033  Score=29.38  Aligned_cols=31  Identities=19%  Similarity=0.244  Sum_probs=26.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+ |+|+.|...+..|.++   +.+|.++.+++
T Consensus         8 viVi-GaG~~Gl~~A~~La~~---G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVL-GTGITECILSGLLSVD---GKKVLHIDKQD   38 (297)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSS
T ss_pred             EEEE-CcCHHHHHHHHHHHHC---CCCEEEEcCCC
Confidence            5666 5899999999999987   68999999864

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.51  E-value=0.036  Score=29.52  Aligned_cols=34  Identities=21%  Similarity=0.193  Sum_probs=28.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+|.++| .|.+|..++..|++.   +++|++.+|+++
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~---G~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDH---GFVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHT---TCCEEEECSSTH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHC---CCeEEEEcCCHH
Confidence            4677774 599999999999997   789999999764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.40  E-value=0.045  Score=26.94  Aligned_cols=39  Identities=15%  Similarity=0.136  Sum_probs=28.5

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+++|+|+|.|+ |-.|..++.+|...   ..+++.+.|++.
T Consensus        28 ~~f~gK~VlVVG~-g~Sa~dia~~l~~~---ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGG-ASSANDLVRHLTPV---AKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECS-SHHHHHHHHHHTTT---SCSSEEEECTTC
T ss_pred             hhcCCCeEEEECC-CCCHHHHHHHHHHh---cCEEEEEEecCc
Confidence            4578999999965 58899999998876   455565665543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.052  Score=27.79  Aligned_cols=38  Identities=26%  Similarity=0.305  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhC-CCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSF-PDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~-~~~~~v~~~~r~~~   51 (67)
                      .++++|.|| ||+|-.++..|.... ..+.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            568888854 999999988885420 01468999888653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.31  E-value=0.049  Score=31.18  Aligned_cols=34  Identities=12%  Similarity=-0.008  Sum_probs=28.5

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .+++++++|-| .|-+|+++++.|.+.   +.+|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~---Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAEL---GAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHH---TCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHc---CCeEEEEe
Confidence            36788999887 799999999999998   67777664

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.11  E-value=0.054  Score=28.45  Aligned_cols=35  Identities=20%  Similarity=0.110  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcc-eEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIG-AIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~-~v~~~~r~~~   51 (67)
                      +++|+|. |.|..|-..+.+|.++   +. .|+++.|.+.
T Consensus         4 ~~kVaII-GaGpaGl~aA~~l~~~---G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALL-GAGPASISCASFLARL---GYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEE-CCSHHHHHHHHHHHHT---TCCCEEEEESSSS
T ss_pred             CCEEEEE-CChHHHHHHHHHHHHC---CCCeEEEEEecCc
Confidence            5678888 5699999999999997   55 5999998654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.05  E-value=0.056  Score=29.90  Aligned_cols=36  Identities=11%  Similarity=0.182  Sum_probs=29.3

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.++|+|+ |+|..|-..+..|.++   +++|.++.+.+
T Consensus        28 ~~pkkV~II-GaG~aGLsaA~~L~~~---G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIV-GAGMAGLSAAYVLAGA---GHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEE-CCBHHHHHHHHHHHHH---TCEEEEECSSS
T ss_pred             CCCCeEEEE-CCCHHHHHHHHHHHHC---CCCEEEEeCCC
Confidence            345789888 5689999999999998   68999998753

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=94.02  E-value=0.14  Score=25.25  Aligned_cols=38  Identities=13%  Similarity=0.156  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .++++|. |.|++|-.++..|.+....+.+|+++.|.+.
T Consensus        18 p~~v~Ii-GgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCV-GGGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEE-CSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEE-CCChHHHHHHHHhHhhcccccccceeccccc
Confidence            3678887 5699999999877665334679999998654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.02  E-value=0.038  Score=30.05  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|.|.| +|-.|.++...|.+.   +++|++.+|++
T Consensus         7 m~KI~ViG-aG~wGtAlA~~La~~---g~~V~l~~r~~   40 (189)
T d1n1ea2           7 LNKAVVFG-SGAFGTALAMVLSKK---CREVCVWHMNE   40 (189)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTT---EEEEEEECSCH
T ss_pred             eceEEEEC-CCHHHHHHHHHHHHc---CCeEEEEEecH
Confidence            34688885 566799999998886   78999998864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.95  E-value=0.13  Score=25.67  Aligned_cols=35  Identities=17%  Similarity=0.188  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+|.|.| .|-+|+-++....+.   +.++++++.+++
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~l---G~~v~v~d~~~~   45 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRL---GVEVIAVDRYAD   45 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTT---TCEEEEEESSTT
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHC---CCEEEEEcCCCC
Confidence            35799997 789999999998887   689999998654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.93  E-value=0.073  Score=27.99  Aligned_cols=36  Identities=11%  Similarity=0.161  Sum_probs=27.0

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.+++|.|+ |.+|...++.+....  ...|++.++++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g--~~~vv~~~~~~   67 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMT--PATVIALDVKE   67 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHC--CCEEEEEESSH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhc--Ccccccccchh
Confidence            3578888875 999999999887762  35777777754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.90  E-value=0.094  Score=28.61  Aligned_cols=37  Identities=11%  Similarity=-0.000  Sum_probs=31.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|. |.|-||+.+++.+...   +.+|+..++...
T Consensus        47 L~gktvgIi-G~G~IG~~va~~l~~f---g~~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGII-GLGRVGQAVALRAKAF---GFNVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEE-CCSHHHHHHHHHHHTT---TCEEEEECTTSC
T ss_pred             eeCceEEEe-ccccccccceeeeecc---ccceeeccCccc
Confidence            567899888 7899999999999887   679999887644

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.89  E-value=0.038  Score=29.56  Aligned_cols=38  Identities=16%  Similarity=0.007  Sum_probs=29.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      -.+.+++|.| .|.+|...++.+....  ...|++.++++.
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~G--a~~Vi~~d~~~~   64 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAG--ASRIIAIDINGE   64 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT--CSEEEEECSCGG
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhC--CceeeeeccchH
Confidence            3467899996 5999999999988872  347888887654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.86  E-value=0.066  Score=31.32  Aligned_cols=35  Identities=20%  Similarity=0.108  Sum_probs=28.2

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+++++++|-| .|-+|+++++.|.+.   +.+|+.++-
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~---Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRF---GAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHT---TCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHC---CCEEEEEEc
Confidence            46778888885 499999999999987   678777653

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.79  E-value=0.098  Score=28.45  Aligned_cols=33  Identities=18%  Similarity=0.251  Sum_probs=25.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .++|.| +|++|-.++..|.+..+. .+|+++++.
T Consensus         6 ~~vIvG-~G~aG~~~A~~Lr~~~~~-~~I~li~~e   38 (213)
T d1m6ia1           6 PFLLIG-GGTAAFAAARSIRARDPG-ARVLIVSED   38 (213)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHSTT-CEEEEEESS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhcCCC-CcEEEEeCC
Confidence            456665 599999999999887544 478888764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=93.71  E-value=0.086  Score=29.79  Aligned_cols=34  Identities=12%  Similarity=0.101  Sum_probs=28.3

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .+++++++|- |-|-+|+++++.|.+.   +.+|+.++
T Consensus        28 ~l~g~~v~Iq-GfGnVG~~~a~~L~~~---Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQ-GMGNVGRWTAYWLEKM---GAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEE-CCSHHHHHHHHHHHTT---TCEEEEEE
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHc---CCeEEEee
Confidence            3678888888 5999999999999987   67877665

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.69  E-value=0.086  Score=26.51  Aligned_cols=33  Identities=15%  Similarity=0.273  Sum_probs=27.2

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         14 GQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      |+|.|.|++   +-.|..+++.|++.   +++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~---g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSK---GFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHC---CCEEEEEccc
Confidence            579999987   67899999999997   5788887543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.58  E-value=0.079  Score=28.63  Aligned_cols=36  Identities=14%  Similarity=0.155  Sum_probs=29.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      .+++|+++|.|.+..+|+=+...|+++   +..|+....
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~---gaTVt~~~~   61 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLAND---GATVYSVDV   61 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTT---SCEEEEECS
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHC---CCEEEEecc
Confidence            477999999999999999999988886   467766543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.57  E-value=0.061  Score=29.69  Aligned_cols=31  Identities=16%  Similarity=0.251  Sum_probs=26.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+ |.|.+|..++.+|.++   +.+|+++++..
T Consensus         7 vvII-GaGi~Gls~A~~La~~---G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVI-GGGIIGSAIAYYLAKE---NKNTALFESGT   37 (276)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSS
T ss_pred             EEEE-CcCHHHHHHHHHHHHC---CCcEEEEeCCC
Confidence            6677 6799999999999997   68999999864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.45  E-value=0.11  Score=28.22  Aligned_cols=35  Identities=17%  Similarity=0.107  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..+|+|+ |.|..|..++..|.++   +.+|+++.|.+.
T Consensus         4 ~~kV~Ii-GaG~aGl~~A~~L~~~---G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVV-GGSISGLTAALMLRDA---GVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             CCcEEEE-CcCHHHHHHHHHHHHC---CCCEEEEeCCCC
Confidence            4578888 5699999999998887   689999998643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.42  E-value=0.065  Score=27.75  Aligned_cols=38  Identities=13%  Similarity=0.066  Sum_probs=31.2

Q ss_pred             ccCCeEEEEcC----------CChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGG----------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa----------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ...++|+|.|+          -.|.+.+.++.|.+.   +++++.+..++.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~---g~~~iliN~NP~   52 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREE---GYRVINVNSNPA   52 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH---TCEEEEECSCTT
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc---CCeEEEecCchH
Confidence            34578999999          567899999999998   678888887765

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.40  E-value=0.16  Score=27.32  Aligned_cols=37  Identities=19%  Similarity=0.118  Sum_probs=30.2

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|. |.|.||+.+++.+...   +.+|+..++...
T Consensus        42 l~~~~vgii-G~G~IG~~va~~l~~f---g~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGII-GYGHIGTQLGILAESL---GMYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             ccceEEEEe-ecccchhhhhhhcccc---cceEeecccccc
Confidence            457788887 8899999999998776   579999987543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.11  E-value=0.17  Score=27.28  Aligned_cols=36  Identities=11%  Similarity=0.091  Sum_probs=30.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+.++|+|. |+|..|-..+..|.++   +++|+++.+.+
T Consensus        41 ~~~k~V~II-GaGPAGL~AA~~la~~---G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVV-GAGPAGLAFAINAAAR---GHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEE-CCSHHHHHHHHHHHTT---TCEEEEEESSS
T ss_pred             CCCcEEEEE-CccHHHHHHHHHHHhh---ccceEEEeccC
Confidence            446789999 5699999999999887   79999999864

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.08  E-value=0.12  Score=28.04  Aligned_cols=37  Identities=11%  Similarity=0.009  Sum_probs=27.7

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -.+.+++|.|+ |-+|...+..+....  ..+|+++++++
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~g--a~~Vi~~d~~~   60 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLG--AAVVIVGDLNP   60 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEESCH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhc--ccceeeecccc
Confidence            34679999975 999988887776652  45888888764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.97  E-value=0.048  Score=28.66  Aligned_cols=37  Identities=11%  Similarity=-0.006  Sum_probs=26.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|+|.|+.| +|...+..+...  .+..|+++++++.
T Consensus        28 ~g~~VlI~G~Gg-~g~~~~~~~~~~--g~~~Vi~~~~~~~   64 (175)
T d1cdoa2          28 PGSTCAVFGLGA-VGLAAVMGCHSA--GAKRIIAVDLNPD   64 (175)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHT--TCSEEEEECSCGG
T ss_pred             CCCEEEEEecCC-ccchHHHHHHHH--hhchheeecchHH
Confidence            457899998755 666666666665  2468999888754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.68  E-value=0.16  Score=27.32  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=29.1

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|.| .|.||+.+++.+...   +.+|+..++...
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~f---g~~v~~~d~~~~   78 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAF---GAYVVAYDPYVS   78 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTT---TCEEEEECTTSC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhc---cceEEeecCCCC
Confidence            4567777775 799999999998876   578988887543

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.08  Score=33.03  Aligned_cols=39  Identities=13%  Similarity=0.298  Sum_probs=30.8

Q ss_pred             hhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490          9 DFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus         9 ~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ..+.+.+|+|.|+ |.+|..+++.|...  ++..++++|.+.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~--GVg~itivD~d~   59 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLP--GIGSFTIIDGNQ   59 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTT--TCSEEEEECCSB
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHh--cCCEEEEEcCCc
Confidence            3466789999987 66999999999986  357898887643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.13  E-value=0.18  Score=25.98  Aligned_cols=24  Identities=25%  Similarity=0.394  Sum_probs=19.7

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      ++++|+|. |.|++|-.++..|.+.
T Consensus         2 ~~~~VvII-GgG~~G~e~A~~l~~~   25 (185)
T d1q1ra1           2 ANDNVVIV-GTGLAGVEVAFGLRAS   25 (185)
T ss_dssp             CSCEEEEE-CCSHHHHHHHHHHHHT
T ss_pred             CCCCEEEE-CCcHHHHHHHHHHHHc
Confidence            35677776 6799999999999887

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.07  E-value=0.23  Score=26.68  Aligned_cols=37  Identities=11%  Similarity=0.066  Sum_probs=29.9

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|. |.|-||+.+++.+...   +.+|+..++...
T Consensus        42 l~~~~vgii-G~G~IG~~va~~l~~f---g~~v~~~d~~~~   78 (188)
T d2naca1          42 LEAMHVGTV-AAGRIGLAVLRRLAPF---DVHLHYTDRHRL   78 (188)
T ss_dssp             CTTCEEEEE-CCSHHHHHHHHHHGGG---TCEEEEECSSCC
T ss_pred             ccccceeec-cccccchhhhhhhhcc---CceEEEEeeccc
Confidence            456788877 5899999999999887   578999888654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.66  E-value=0.23  Score=25.39  Aligned_cols=37  Identities=14%  Similarity=0.063  Sum_probs=30.0

Q ss_pred             cCCeEEEEcC----------CChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGG----------TGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa----------~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++++|.|+          -.|.+.+.++.|.+.   +++++.+..++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~---g~~~IliN~NPe   49 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALRED---GYETIMVNCNPE   49 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT---TCEEEEECCCTT
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhc---CCeEEEEecChh
Confidence            3578999998          457889999999997   688888887765

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.62  E-value=0.27  Score=26.75  Aligned_cols=36  Identities=19%  Similarity=0.237  Sum_probs=29.6

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ..++|+|. |+|..|-..+..|.++   +++|+++.+...
T Consensus        48 ~~k~VvII-GaGpAGl~aA~~l~~~---G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIV-GAGPSGSEAARVLMES---GYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSSSS
T ss_pred             CCceEEEE-cccHHHHHHHHHHHHh---ccceeeEeeccc
Confidence            45788888 5699999999999987   689999987653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.55  E-value=0.17  Score=27.90  Aligned_cols=31  Identities=19%  Similarity=0.167  Sum_probs=26.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|. |.|..|...+.+|.++   +.+|+++.+..
T Consensus         6 vvII-GaGi~Gls~A~~La~~---G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVV-GAGSMGMAAGYQLAKQ---GVKTLLVDAFD   36 (281)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSC
T ss_pred             EEEE-CcCHHHHHHHHHHHHC---CCcEEEEeCCC
Confidence            5566 6799999999999997   68999999853

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.45  E-value=0.3  Score=26.41  Aligned_cols=37  Identities=14%  Similarity=0.109  Sum_probs=29.4

Q ss_pred             ccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         11 YRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        11 ~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +.++++.|. |.|-||+.+++.+...   +.+|+..++...
T Consensus        45 l~g~tvgIi-G~G~IG~~va~~l~~f---g~~v~~~d~~~~   81 (191)
T d1gdha1          45 LDNKTLGIY-GFGSIGQALAKRAQGF---DMDIDYFDTHRA   81 (191)
T ss_dssp             CTTCEEEEE-CCSHHHHHHHHHHHTT---TCEEEEECSSCC
T ss_pred             ecccceEEe-ecccchHHHHHHHHhh---cccccccccccc
Confidence            457888887 6789999999988876   578888887544

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.43  E-value=0.16  Score=28.36  Aligned_cols=33  Identities=24%  Similarity=0.441  Sum_probs=25.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .|+|+ |.|.+|..++.+|.+++  .++|.+++|..
T Consensus         3 dViII-GaGi~G~s~A~~La~~G--~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVII-GAGIVGTNLADELVTRG--WNNITVLDQGP   35 (305)
T ss_dssp             CEEEE-CCSHHHHHHHHHHHHTT--CCCEEEECSSC
T ss_pred             CEEEE-CcCHHHHHHHHHHHHcC--CCcEEEEeCCC
Confidence            36666 56899999999998872  24799999864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.43  E-value=0.19  Score=25.76  Aligned_cols=38  Identities=11%  Similarity=0.037  Sum_probs=29.1

Q ss_pred             hhhhc-cCCeEEEEcCC---ChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490          7 VDDFY-RDGQILVTGGT---GFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus         7 ~~~~~-~~~~ilitGa~---G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      +.+++ +.++|.|.||+   +-.|..+++.|++.   ++.++.+.
T Consensus         6 i~~~L~~pksIAVVGaS~~~~k~g~~v~~~L~~~---g~~~~~v~   47 (136)
T d1iuka_           6 LRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQ---GYRVLPVN   47 (136)
T ss_dssp             HHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHT---TCEEEEEC
T ss_pred             HHHHHhCCCeEEEEeecCCCCCchHHHHHHHhcC---CCCceEEE
Confidence            44443 67899999998   56899999999987   56666654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.36  E-value=0.31  Score=27.42  Aligned_cols=35  Identities=14%  Similarity=0.073  Sum_probs=26.1

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .+++++++|-|. |-+|.++++.|.+.  .+.+|+.++
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~--~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSED--FGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHT--TCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHh--cCcceeecc
Confidence            367888888855 99999999998764  256666654

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.23  E-value=0.22  Score=26.52  Aligned_cols=31  Identities=16%  Similarity=0.158  Sum_probs=25.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|| |..|...+.++.+.   +.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~---G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMY---GQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTT---TCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHC---CCEEEEEeccC
Confidence            677766 99999999999987   67899998753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.01  E-value=0.3  Score=27.42  Aligned_cols=36  Identities=19%  Similarity=0.142  Sum_probs=29.0

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      .+++++++|- |-|-+|+++++.|.+.   +.+|++.+.+
T Consensus        36 ~l~g~~v~Iq-G~GnVG~~~a~~L~~~---Gakvv~~d~~   71 (230)
T d1leha1          36 SLEGLAVSVQ-GLGNVAKALCKKLNTE---GAKLVVTDVN   71 (230)
T ss_dssp             CCTTCEEEEE-CCSHHHHHHHHHHHHT---TCEEEEECSC
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHC---CCEEEeeccc
Confidence            3677888777 6899999999999997   6788876543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.33  Score=26.28  Aligned_cols=33  Identities=15%  Similarity=0.279  Sum_probs=26.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ..+|+|+ |+|+-|-..+..|.++   +++|.++-++
T Consensus         5 ~~kViVI-GaG~aGL~aA~~L~~~---G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIII-GSGVSGLAAARQLQSF---GMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEE-CCBHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred             CCcEEEE-CCCHHHHHHHHHHHhC---CCCEEEEeCC
Confidence            3467787 6799999999999887   6899988664

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.62  E-value=0.52  Score=24.98  Aligned_cols=37  Identities=16%  Similarity=0.336  Sum_probs=29.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .+++|+|+|. |+|-.|-.++..+.+.   +.+++.+.|..
T Consensus        29 ~~~gK~V~Vv-G~G~Sa~dia~~~~~~---~~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVI-GTGSSGIQVSPQIAKQ---AAELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEE-CCSHHHHHHHHHHHHH---BSEEEEEESSC
T ss_pred             CCCCCEEEEE-CCCccHHHHHHHHHhh---hcccccccccc
Confidence            4688999999 5677899999999987   56777777654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.61  E-value=0.45  Score=22.95  Aligned_cols=41  Identities=20%  Similarity=-0.052  Sum_probs=27.6

Q ss_pred             hhhccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490          8 DDFYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus         8 ~~~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +++.+.++|.+.|-.|--=+.+++.|.++   ++.|...|+...
T Consensus         3 ~~~~~~~~ihfiGigG~GMs~LA~~L~~~---G~~VsGSD~~~~   43 (96)
T d1p3da1           3 PEMRRVQQIHFIGIGGAGMSGIAEILLNE---GYQISGSDIADG   43 (96)
T ss_dssp             CCCTTCCEEEEETTTSTTHHHHHHHHHHH---TCEEEEEESCCS
T ss_pred             ccchhCCEEEEEEECHHHHHHHHHHHHhC---CCEEEEEeCCCC
Confidence            34455677877754443225578888887   789999988643

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.57  E-value=0.39  Score=22.58  Aligned_cols=34  Identities=24%  Similarity=0.225  Sum_probs=26.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.|. |+|-+|+-++......   +.++++++-.++
T Consensus         2 k~vgIl-G~GQLgrMl~~Aa~~L---G~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVL-GNGQLGRMLRQAGEPL---GIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEE-BCSHHHHHHHHHHGGG---TEEEEEECTTSC
T ss_pred             CEEEEE-cCCHHHHHHHHHHHHc---CCEEEEEcCCCC
Confidence            567787 5688899999998887   678888886543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.34  E-value=0.27  Score=27.93  Aligned_cols=32  Identities=13%  Similarity=0.435  Sum_probs=26.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .++|. |+|+.|..++..|.+.   +.+|.++.+++
T Consensus         3 dv~II-GaG~sGl~~A~~L~~~---g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIV-GSGLFGAVCANELKKL---NKKVLVIEKRN   34 (298)
T ss_dssp             EEEEE-CCSHHHHHHHHHHGGG---TCCEEEECSSS
T ss_pred             cEEEE-CCcHHHHHHHHHHHhC---CCcEEEEECCC
Confidence            46666 6799999999999887   67899988753

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.19  E-value=0.43  Score=27.13  Aligned_cols=36  Identities=19%  Similarity=0.250  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         13 DGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        13 ~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      -|+|+|+ |+|..|-..+..|++.. .+.+|+++.|+.
T Consensus         4 ~KrVaII-GaG~sGl~~A~~L~~~~-~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAII-GAGPSGLVTAKALLAEK-AFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEE-CCSHHHHHHHHHHHTTT-CCSEEEEECSSS
T ss_pred             CCeEEEE-CcCHHHHHHHHHHHHhC-CCCCEEEEECCC
Confidence            4678888 56999999999988762 236899999874

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=90.04  E-value=0.3  Score=27.34  Aligned_cols=32  Identities=19%  Similarity=0.296  Sum_probs=20.1

Q ss_pred             CeEEEEc-CCC-hH--HHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTG-GTG-FM--GKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitG-a~G-~i--G~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|+|++ ||| .+  ...+.++|.++   +++|..+..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~---G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ---GWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTT---TCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhC---CCEEEEEEe
Confidence            4666665 443 22  33577888776   688887664

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.00  E-value=0.4  Score=25.75  Aligned_cols=31  Identities=26%  Similarity=0.533  Sum_probs=23.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +|.|-| .|.||+.+++.+.++ ++ .+|..+.-
T Consensus         3 KVaING-fGRIGR~v~Ral~~~-~d-ievVaInd   33 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQ-PD-MKLVGVAK   33 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTC-TT-EEEEEEEC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhC-CC-CEEEEEEC
Confidence            578886 799999999999986 34 35655543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.65  E-value=0.37  Score=24.51  Aligned_cols=31  Identities=16%  Similarity=0.337  Sum_probs=23.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|. |.|++|-.++..|.+.    .+|+++.+.+
T Consensus         2 rVvII-GgG~~G~e~A~~l~~~----~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIV-GNGPGGFELAKQLSQT----YEVTVIDKEP   32 (167)
T ss_dssp             EEEEE-CCSHHHHHHHHHHTTT----SEEEEECSSS
T ss_pred             eEEEE-CCcHHHHHHHHHHHcC----CCEEEEeccc
Confidence            56677 5689999999988653    5899988754

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.61  E-value=0.05  Score=29.28  Aligned_cols=35  Identities=11%  Similarity=0.221  Sum_probs=24.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc---ceEEEEEeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI---GAIYIMVRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~---~~v~~~~r~   49 (67)
                      |+|+|. |+|.+|...+.+|.++....   .++.++++.
T Consensus         1 mkV~VI-GaGi~GlstA~~L~~~G~~v~v~e~~~i~~~~   38 (246)
T d1kifa1           1 MRVVVI-GAGVIGLSTALCIHERYHSVLQPLDVKVYADR   38 (246)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHHHTTTSSSCEEEEEESC
T ss_pred             CEEEEE-CchHHHHHHHHHHHHCCCCceEEeeeeecccC
Confidence            578888 56999999999999973221   245555543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.51  E-value=0.37  Score=25.78  Aligned_cols=37  Identities=19%  Similarity=0.226  Sum_probs=30.9

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++.+|+++|. |=|.+|+-+++.+...   +.+|++...+|
T Consensus        20 ~laGk~vvV~-GYG~vGrG~A~~~rg~---Ga~V~V~E~DP   56 (163)
T d1v8ba1          20 LISGKIVVIC-GYGDVGKGCASSMKGL---GARVYITEIDP   56 (163)
T ss_dssp             CCTTSEEEEE-CCSHHHHHHHHHHHHH---TCEEEEECSCH
T ss_pred             eecCCEEEEe-cccccchhHHHHHHhC---CCEEEEEecCc
Confidence            4678888888 5699999999999998   67898877654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.31  E-value=0.44  Score=25.18  Aligned_cols=31  Identities=16%  Similarity=0.097  Sum_probs=26.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|| |..|...+.++.+.   +.+|.++.+.+
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~---G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQL---GFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHH---TCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHC---CCcEEEEEecC
Confidence            677766 89999999999987   68999998754

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=89.08  E-value=0.41  Score=26.61  Aligned_cols=34  Identities=15%  Similarity=0.200  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .-|+|+|| |..|-..+..|.++  .+.+|.++.+.+
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~--~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKN--PNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTS--TTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHc--cCCeEEEEecCC
Confidence            34888877 99999999998763  268999999864

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.01  E-value=0.19  Score=26.21  Aligned_cols=32  Identities=16%  Similarity=0.200  Sum_probs=22.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +|+|.| .|++|-.++..|.+...+. .|+.+.+
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v-~i~~~~~   36 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQG-LITVVGD   36 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCS-CEEEEES
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCce-EEEEEec
Confidence            477775 8999999999998874332 3444433

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.63  E-value=0.71  Score=24.81  Aligned_cols=34  Identities=21%  Similarity=0.276  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~~   51 (67)
                      .+|+|. |.|..|..++..|.+.   + +.|.++.|++.
T Consensus         2 ~~V~Iv-GaG~aGl~~A~~L~~~---Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIA-GAGIGGLSCALALHQA---GIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEE-CCSHHHHHHHHHHHHT---TCSEEEEEESSSS
T ss_pred             CEEEEE-CcCHHHHHHHHHHHhC---CCCeEEEEeCCCC
Confidence            467777 5699999999988886   5 58889988654

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=88.42  E-value=0.41  Score=27.51  Aligned_cols=32  Identities=13%  Similarity=0.162  Sum_probs=21.8

Q ss_pred             CeEEEEcC------CChHH---HHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGG------TGFMG---KLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa------~G~iG---~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|++.+.      +|.+|   ..|++.|.++   |++|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~---Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASL---GHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHT---TCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHc---CCEEEEEec
Confidence            46666553      35555   5567888887   799998874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.41  E-value=0.37  Score=26.58  Aligned_cols=32  Identities=28%  Similarity=0.269  Sum_probs=26.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|.|| |..|..++..|.+.   +.+|.++.|.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~---G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKA---GIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHH---TCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHC---CCCEEEEeCCC
Confidence            4777755 69999999999998   67999999865

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.4  Score=27.66  Aligned_cols=28  Identities=14%  Similarity=0.233  Sum_probs=24.1

Q ss_pred             CCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         21 GTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        21 a~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      +||..|.+++++++.+   |+.|+++.+..+
T Consensus        44 SSGk~G~alA~~~~~~---Ga~V~li~g~~s   71 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAA---GYGVLFLYRARS   71 (290)
T ss_dssp             CCCHHHHHHHHHHHHT---TCEEEEEEETTS
T ss_pred             CchHHHHHHHHHHHHc---CCEEEEEecCCc
Confidence            4799999999999998   789999987643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.00  E-value=0.46  Score=24.67  Aligned_cols=32  Identities=19%  Similarity=0.350  Sum_probs=25.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCc-ceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDI-GAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~-~~v~~~~r~~   50 (67)
                      +|+|. |+|..|-..+..|.++   + ++|+++.+++
T Consensus         2 ~V~II-GaG~aGL~aA~~L~~~---G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVV-GAGMSGISAAKRLSEA---GITDLLILEATD   34 (347)
T ss_dssp             CEEEE-CCBHHHHHHHHHHHHT---TCCCEEEECSSS
T ss_pred             CEEEE-CCcHHHHHHHHHHHhC---CCCcEEEEECCC
Confidence            36666 6799999999999887   5 4799988753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.97  E-value=0.77  Score=25.61  Aligned_cols=35  Identities=11%  Similarity=0.084  Sum_probs=26.6

Q ss_pred             hccCCeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         10 FYRDGQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .+++++++|- |.|-+|+++++.|.+.  .+.+|+.++
T Consensus        28 ~l~g~~vaIq-G~GnVG~~~a~~L~~e--~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQ-GFGNVGQFAALLISQE--LGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEE-CCSHHHHHHHHHHHHH--HCCEEEEEE
T ss_pred             CcCCCEEEEE-CCCHHHHHHHHHHHHh--cCCceEEee
Confidence            4678888877 5999999999999643  156777665

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=87.72  E-value=0.57  Score=25.09  Aligned_cols=24  Identities=25%  Similarity=0.368  Sum_probs=17.3

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      +.++++|.||.|+ |+.+++.+...
T Consensus         1 k~kkl~i~Gagg~-~~~v~di~~~~   24 (193)
T d3bswa1           1 RTEKIYIYGASGH-GLVCEDVAKNM   24 (193)
T ss_dssp             CCSEEEEEC--CH-HHHHHHHHHHH
T ss_pred             CCCEEEEEcCCHh-HHHHHHHHHhC
Confidence            4578999998887 78888777766

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.38  E-value=0.57  Score=25.42  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=23.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|++.|.+ ..|..+++.|++.   +++|..+..
T Consensus         1 MkI~~~G~~-~~~~~~l~~L~~~---~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVIGQS-LFGQEVYCHLRKE---GHEVVGVFT   31 (203)
T ss_dssp             CEEEEECCH-HHHHHHHHHHHHT---TCEEEEEEE
T ss_pred             CEEEEEcCC-HHHHHHHHHHHHC---CCcEEEEEc
Confidence            578888654 5699999999886   577775553

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.33  E-value=0.29  Score=24.38  Aligned_cols=32  Identities=9%  Similarity=0.253  Sum_probs=23.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |.++|.|. |-+|..+++.|..     +.|.+++.++.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~~-----~~i~vi~~d~~   32 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELRG-----SEVFVLAEDEN   32 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSCG-----GGEEEEESCTT
T ss_pred             CEEEEECC-CHHHHHHHHHHcC-----CCCEEEEcchH
Confidence            45778875 6679999999854     45777776544

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.02  E-value=0.72  Score=22.22  Aligned_cols=31  Identities=6%  Similarity=-0.041  Sum_probs=22.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      |+|||.|+.|- -.+++..|.++   .++|++..-
T Consensus         1 MkVLviGsGgR-EHAia~~l~~s---~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILGSGGR-EHAIGWAFAKQ---GYEVHFYPG   31 (90)
T ss_dssp             CEEEEEECSHH-HHHHHHHHHHT---TCEEEEEEC
T ss_pred             CEEEEECCCHH-HHHHHHHHhcC---CCeEEEecC
Confidence            68999988776 56777777665   468887643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.82  E-value=0.67  Score=25.51  Aligned_cols=31  Identities=19%  Similarity=0.225  Sum_probs=25.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      |+|+ |+|..|-..+..|.++   +++|+++.++.
T Consensus         2 ViVI-GaG~aGL~aA~~L~~~---G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVV-GGGISGMAAAKLLHDS---GLNVVVLEARD   32 (383)
T ss_dssp             EEEE-CCBHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred             EEEE-CCCHHHHHHHHHHHhC---CCCEEEEecCC
Confidence            4555 6799999999999987   68999998643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.17  E-value=0.98  Score=21.46  Aligned_cols=35  Identities=11%  Similarity=-0.015  Sum_probs=23.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|.++|-.|-==+.+++.|+++   ++.|...|+.+.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~---G~~VsGSD~~~~   36 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSN---GNDVYGSNIEET   36 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHT---TCEEEEECSSCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhC---CCeEEEEeCCCC
Confidence            57777765554223567777776   789999988753

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.92  E-value=0.6  Score=25.72  Aligned_cols=37  Identities=16%  Similarity=0.181  Sum_probs=27.6

Q ss_pred             cCCeEEEEcCCChHHHHHH-----HHHHhhCCCcceEEEEEeCCC
Q psy17490         12 RDGQILVTGGTGFMGKLLI-----DKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~-----~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      .+.+|+|+.|-|.+|+..+     ..|.++   +++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~---G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADM---GFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHT---TCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence            3567888878998888764     555554   689999998864

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.54  E-value=0.84  Score=25.98  Aligned_cols=32  Identities=22%  Similarity=0.371  Sum_probs=26.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      .|+|+ |+|+.|-..+.+|.+.   +.+|.++.+.+
T Consensus         9 dV~II-GAG~sGl~~a~~L~~~---G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVV-GAGFSGLYALYRLREL---GRSVHVIETAG   40 (298)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSS
T ss_pred             CEEEE-CccHHHHHHHHHHHhC---CCCEEEEEcCC
Confidence            57777 5689999999999887   56899998754

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.28  E-value=0.78  Score=26.15  Aligned_cols=30  Identities=17%  Similarity=0.148  Sum_probs=25.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRD   49 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~   49 (67)
                      ++|. |+|+-|..++..|.+.   +.+|.++-+-
T Consensus         5 VIVV-GsG~aG~v~A~rLaea---G~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVI-GTGYGAAVSALRLGEA---GVQTLMLEMG   34 (367)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHT---TCCEEEEESS
T ss_pred             EEEe-CcCHHHHHHHHHHHHC---cCeEEEEecC
Confidence            4454 7899999999999886   6899999984

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.28  E-value=0.4  Score=24.48  Aligned_cols=24  Identities=17%  Similarity=0.124  Sum_probs=20.8

Q ss_pred             cCCeEEEEcCCChHHHHHHHHHHhh
Q psy17490         12 RDGQILVTGGTGFMGKLLIDKLLRS   36 (67)
Q Consensus        12 ~~~~ilitGa~G~iG~~l~~~l~~~   36 (67)
                      .+++++|.|| |++|..++..+.+.
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~   51 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQP   51 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCC
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHc
Confidence            3678999985 99999999999886

>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: Probable aromatic acid decarboxylase Pad1
species: Escherichia coli O157:H7 [TaxId: 83334]

Probab=84.02  E-value=0.96  Score=24.20  Aligned_cols=31  Identities=23%  Similarity=0.281  Sum_probs=21.7

Q ss_pred             EEEEcCCC-hHHHHHHHHHHhhCCCcceEEEEEe
Q psy17490         16 ILVTGGTG-FMGKLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        16 ilitGa~G-~iG~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      +.||||+| ..+..+++.|.+.  .+.+|.++.-
T Consensus         5 lgITGas~a~~a~~ll~~L~~~--~g~~V~vv~T   36 (186)
T d1sbza_           5 VGMTGATGAPLGVALLQALREM--PNVETHLVMS   36 (186)
T ss_dssp             EEECSSSCHHHHHHHHHHHHTC--TTCEEEEEEC
T ss_pred             EEEccHHHHHHHHHHHHHHHHh--cCCEEEEEEC
Confidence            56899888 4578888888874  2457766543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.84  E-value=1.3  Score=23.87  Aligned_cols=30  Identities=27%  Similarity=0.164  Sum_probs=22.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      |+|++.|.+. .|..+++.|++.   +++|..+.
T Consensus         1 Mkiv~~~~~~-~g~~~l~~L~~~---g~~I~~Vv   30 (203)
T d2blna2           1 MKTVVFAYHD-MGCLGIEALLAA---GYEISAIF   30 (203)
T ss_dssp             CEEEEEECHH-HHHHHHHHHHHT---TCEEEEEE
T ss_pred             CeEEEEecCH-HHHHHHHHHHHC---CCCEEEEE
Confidence            5788886655 599999999987   56776554

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.81  E-value=1.3  Score=23.29  Aligned_cols=31  Identities=23%  Similarity=0.184  Sum_probs=25.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|| |..|...+.++.+.   +.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~---G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAEL---GARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT---TCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHC---CCEEEEEeccC
Confidence            567755 99999999999887   67899998753

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.62  E-value=1.6  Score=23.00  Aligned_cols=31  Identities=19%  Similarity=0.300  Sum_probs=22.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEEE
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMV   47 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~   47 (67)
                      .+|.|-| -|-||+.+++.++++ ++. +|..+.
T Consensus         3 irIaING-fGRIGR~v~Ral~~~-~di-eiVaIN   33 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQ-DDM-ELIGIT   33 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTC-TTE-EEEEEE
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhC-CCc-eEEEEe
Confidence            3688886 599999999999886 444 444443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=82.43  E-value=2  Score=21.91  Aligned_cols=35  Identities=17%  Similarity=0.153  Sum_probs=21.2

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHhhCCCcceEE-EEEeCCC
Q psy17490         14 GQILVTGGTGFMGKL-LIDKLLRSFPDIGAIY-IMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~-l~~~l~~~~~~~~~v~-~~~r~~~   51 (67)
                      +++.|.| +|.+|.. .++.+... ++. +|+ +.++++.
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~-~~~-~i~~v~d~~~~   38 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAA-SDW-TLQGAWSPTRA   38 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSC-SSE-EEEEEECSSCT
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhC-CCc-EEEEEEechhH
Confidence            4688997 5888875 46665553 333 444 4455543

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.30  E-value=1.6  Score=22.92  Aligned_cols=31  Identities=16%  Similarity=0.115  Sum_probs=25.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      ++|+|| |-.|.....++.+.   +.+|.++.+.+
T Consensus         8 viVIG~-GpAGl~aA~~aa~~---G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQL---GFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHT---TCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHC---CCcEEEEEecC
Confidence            677765 88899999998887   68999998754

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=82.08  E-value=0.72  Score=24.89  Aligned_cols=35  Identities=14%  Similarity=0.222  Sum_probs=19.6

Q ss_pred             hccCCeEEEEcCCChHH----HHHHHHHHhhCCCcceEEEEEe
Q psy17490         10 FYRDGQILVTGGTGFMG----KLLIDKLLRSFPDIGAIYIMVR   48 (67)
Q Consensus        10 ~~~~~~ilitGa~G~iG----~~l~~~l~~~~~~~~~v~~~~r   48 (67)
                      ++++|+|+ .|-||-|+    -.+++.|.+.   +.+|.++..
T Consensus         3 ~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~---g~eV~vv~T   41 (183)
T d1p3y1_           3 ILKDKKLL-IGICGSISSVGISSYLLYFKSF---FKEIRVVMT   41 (183)
T ss_dssp             TGGGCEEE-EEECSCGGGGGTHHHHHHHTTT---SSEEEEEEC
T ss_pred             CcCCCEEE-EEEeCHHHHHHHHHHHHHHHHC---CCeEEEEEE
Confidence            35677754 34444443    3555565554   567777654

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.01  E-value=0.8  Score=25.18  Aligned_cols=34  Identities=26%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             CeEEEEcCCChHHHHH-----HHHHHhhCCCcceEEEEEeCCC
Q psy17490         14 GQILVTGGTGFMGKLL-----IDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l-----~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      ++|.|+| -|.+|+-.     ...|.+.   +++|.++|.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~---G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAM---GKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTT---TCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhC---CCcEEEEecCCC
Confidence            4688886 77777654     4455554   789999999864

>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RecA protein-like (ATPase-domain)
domain: Cancer-related NTPase, C1orf57
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.79  E-value=1.1  Score=22.42  Aligned_cols=23  Identities=22%  Similarity=0.260  Sum_probs=16.0

Q ss_pred             CeEEEEcCCC----hHHHHHHHHHHhh
Q psy17490         14 GQILVTGGTG----FMGKLLIDKLLRS   36 (67)
Q Consensus        14 ~~ilitGa~G----~iG~~l~~~l~~~   36 (67)
                      |.|+|||.+|    .+-.++++.|...
T Consensus         2 k~v~ItG~~GtGKTtl~~~i~~~l~~~   28 (189)
T d2i3ba1           2 RHVFLTGPPGVGKTTLIHKASEVLKSS   28 (189)
T ss_dssp             CCEEEESCCSSCHHHHHHHHHHHHHHT
T ss_pred             cEEEEECCCCCcHHHHHHHHHHHHHHC
Confidence            5799999888    4555666666554

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.24  E-value=1.5  Score=22.75  Aligned_cols=33  Identities=18%  Similarity=0.189  Sum_probs=22.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhhCCCcceEEEE-EeC
Q psy17490         14 GQILVTGGTGFMGKLLIDKLLRSFPDIGAIYIM-VRD   49 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~-~r~   49 (67)
                      .++.|.| +|.+|+..++.+... ++ .+|+.+ +++
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~-~~-~~i~ai~d~~   35 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLA-PN-ATISGVASRS   35 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHC-TT-EEEEEEECSS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhC-CC-CEEEEEEeCC
Confidence            3688897 588899999888764 33 455543 454

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.08  E-value=2.4  Score=22.43  Aligned_cols=34  Identities=26%  Similarity=0.329  Sum_probs=26.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCC
Q psy17490         15 QILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        15 ~ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +|+|+ |+|-.|...+.+|.+.. .+++|+++.+.+
T Consensus         3 kv~iI-GaGpaGl~aA~~L~~~~-~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVV-GSGPAGFYTAQHLLKHH-SRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEE-CCSHHHHHHHHHHHHHC-SSCEEEEECSSS
T ss_pred             eEEEE-CccHHHHHHHHHHHhcC-CCCeEEEEeCCC
Confidence            57777 57899999999998763 246999998865

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.83  E-value=1.6  Score=23.24  Aligned_cols=32  Identities=16%  Similarity=0.236  Sum_probs=25.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhhCCCcceEEEEEeCCC
Q psy17490         16 ILVTGGTGFMGKLLIDKLLRSFPDIGAIYIMVRDKK   51 (67)
Q Consensus        16 ilitGa~G~iG~~l~~~l~~~~~~~~~v~~~~r~~~   51 (67)
                      |+|+ |.|..|...+..|.+.   +.+|.++.+.+.
T Consensus         5 ViII-GaG~aGl~aA~~la~~---G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVI-GGGPSGLMAAIGAAEE---GANVLLLDKGNK   36 (251)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHT---TCCEEEECSSSS
T ss_pred             EEEE-CcCHHHHHHHHHHHHC---CCcEEEEeCCCC
Confidence            5666 5678999988888887   689999988643

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.74  E-value=1.8  Score=22.82  Aligned_cols=34  Identities=21%  Similarity=0.080  Sum_probs=24.2

Q ss_pred             CeEEEEcCCChHHHHH-----HHHHHhhCCCcceEEEEEeCC
Q psy17490         14 GQILVTGGTGFMGKLL-----IDKLLRSFPDIGAIYIMVRDK   50 (67)
Q Consensus        14 ~~ilitGa~G~iG~~l-----~~~l~~~~~~~~~v~~~~r~~   50 (67)
                      +.|.|+|+-|.+|+..     +..|.+.   +.+|.++|-+.
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~---g~~VlliD~D~   41 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDR---GRKVLAVDGDL   41 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHT---TCCEEEEECCT
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhC---CCCEEEEeCCC
Confidence            5688998888887755     4444444   67899998653

>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: ATP sulfurylase C-terminal domain
domain: ATP sulfurylase C-terminal domain
species: Fungus (Penicillium chrysogenum) [TaxId: 5076]

Probab=80.69  E-value=0.97  Score=22.61  Aligned_cols=27  Identities=19%  Similarity=0.114  Sum_probs=20.7

Q ss_pred             hccCCeEEEEcCCC----hHHHHHHHHHHhh
Q psy17490         10 FYRDGQILVTGGTG----FMGKLLIDKLLRS   36 (67)
Q Consensus        10 ~~~~~~ilitGa~G----~iG~~l~~~l~~~   36 (67)
                      ..+|..|++||-+|    -+|+.|.+.|...
T Consensus         3 ~~~g~~I~l~G~~GsGKTTia~~La~~L~~~   33 (183)
T d1m8pa3           3 ATQGFTIFLTGYMNSGKDAIARALQVTLNQQ   33 (183)
T ss_dssp             TTCCEEEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCCCCHHHHHHHHHHHHhhc
Confidence            35678999999777    6777788877664