Psyllid ID: psy17499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Secondary Structure (PSIPRED)
cccEEEEEEEEcEEEEEccEEcEEEEEccccEEEEEEcEEEEEEEEEccccEEEEEccccEEEEEcccccEEEEcccccccEEEEccccEEEEEccccccEEcccccccEEEEEEEccccEEEEEcccccEEEEccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEEEEEEEEccEcEEEEEEEEEEEEEEccEcccEEEEEEEcEEEEEcccccEEEEEccEEEEEEccHHHcccEEEEEcccEEEEEccEEEEEEccccccccEEEEEccEEEEEEEcccHHHcHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNcqsvqmqvlgkvptisidktdgcqmylspeslDVEIvlgkvptisidktdgcqmylspesLDVEIVSskssemnvlvpkgngdyvsnQSVLGAFIVEELV
Flexible Loop (DISEMBL)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Low Complexity Region (SEG)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKssvvfdslvssvefvNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Disordered region (IsUnstruct)
***VVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEI*********VLVPKGNGDYVSNQSVLGAFIV****
Disordered Region (DISOPRED)
*NNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Disordered Region (DISEMBL)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Disordered Region (DISPRO)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIVEELV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q3SYV4	472	Adenylyl cyclase-associat	yes	N/A	0.693	0.216	0.473	3e-26
Q4R4I6	475	Adenylyl cyclase-associat	N/A	N/A	0.693	0.214	0.458	1e-25
Q08163	474	Adenylyl cyclase-associat	yes	N/A	0.693	0.215	0.458	2e-25
P40124	474	Adenylyl cyclase-associat	yes	N/A	0.693	0.215	0.458	2e-25
Q01518	475	Adenylyl cyclase-associat	yes	N/A	0.693	0.214	0.458	2e-25
P54654	464	Adenylyl cyclase-associat	yes	N/A	0.632	0.200	0.475	3e-25
P40123	477	Adenylyl cyclase-associat	no	N/A	0.687	0.211	0.435	7e-25
Q5R5X8	477	Adenylyl cyclase-associat	yes	N/A	0.687	0.211	0.435	8e-25
Q5R8B4	475	Adenylyl cyclase-associat	no	N/A	0.693	0.214	0.450	2e-24
P52481	477	Adenylyl cyclase-associat	no	N/A	0.687	0.211	0.442	2e-24

>sp|Q3SYV4|CAP1_BOVIN Adenylyl cyclase-associated protein 1 OS=Bos taurus GN=CAP1 PE=2 SV=3

 Score =  117 bits (292), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y+F CVNST+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 344 LKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 403

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC +YLS  SLD                  C           EIVS+KSSEM
Sbjct: 404 TISINKTDGCHVYLSKNSLD------------------C-----------EIVSAKSSEM 434

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 435 NVLIPTEGGDF 445

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.
Bos taurus (taxid: 9913)

>sp|Q4R4I6|CAP1_MACFA Adenylyl cyclase-associated protein 1 OS=Macaca fascicularis GN=CAP1 PE=2 SV=3

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 347 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVP 406

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  SLD                  C           EIVS+KSSEM
Sbjct: 407 TISINKTDGCHAYLSKNSLD------------------C-----------EIVSAKSSEM 437

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 438 NVLIPTEGGDF 448

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Macaca fascicularis (taxid: 9541)

>sp|Q08163|CAP1_RAT Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus GN=Cap1 PE=1 SV=3

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 346 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVP 405

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  SLD                  C           EIVS+KSSEM
Sbjct: 406 TISINKTDGCHAYLSKNSLD------------------C-----------EIVSAKSSEM 436

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 437 NVLIPTEGGDF 447

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Rattus norvegicus (taxid: 10116)

>sp|P40124|CAP1_MOUSE Adenylyl cyclase-associated protein 1 OS=Mus musculus GN=Cap1 PE=1 SV=4

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 346 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVP 405

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  SLD                  C           EIVS+KSSEM
Sbjct: 406 TISINKTDGCHAYLSKNSLD------------------C-----------EIVSAKSSEM 436

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 437 NVLIPTEGGDF 447

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Mus musculus (taxid: 10090)

>sp|Q01518|CAP1_HUMAN Adenylyl cyclase-associated protein 1 OS=Homo sapiens GN=CAP1 PE=1 SV=5

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 347 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 406

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  SLD                  C           EIVS+KSSEM
Sbjct: 407 TISINKTDGCHAYLSKNSLD------------------C-----------EIVSAKSSEM 437

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 438 NVLIPTEGGDF 448

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Homo sapiens (taxid: 9606)

>sp|P54654|CAP_DICDI Adenylyl cyclase-associated protein OS=Dictyostelium discoideum GN=cap PE=1 SV=1

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 29/122 (23%)

Query: 4   VVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTIS 63
            VY+F CVNS V +KGK+N++ +D CKK+S+VF++ +SS E VNC  V++QV G+VP+I+
Sbjct: 338 TVYIFQCVNSLVQIKGKVNAITLDGCKKTSIVFENAISSCEVVNCNGVEIQVTGRVPSIA 397

Query: 64  IDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVL 123
           IDKT GCQ+YLS +                             SL+ EIVSSKSSEMNVL
Sbjct: 398 IDKTSGCQIYLSKD-----------------------------SLETEIVSSKSSEMNVL 428

Query: 124 VP 125
           +P
Sbjct: 429 IP 430

May have a regulatory bifunctional role. Binds G-actin and PIP2. Involved in microfilament reorganization near the plasma membrane in a PIP2-regulated manner.

Dictyostelium discoideum (taxid: 44689)

>sp|P40123|CAP2_HUMAN Adenylyl cyclase-associated protein 2 OS=Homo sapiens GN=CAP2 PE=1 SV=1

 Score =  112 bits (281), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 30/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y+F C  ST+ +KGK+NS+ +D+CKK  +VFD++V  VE +N Q +Q+QV+G+VP
Sbjct: 350 LKQVAYIFKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVP 409

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KT+GC +YLS ++L                             D EIVS+KSSEM
Sbjct: 410 TISINKTEGCHIYLSEDAL-----------------------------DCEIVSAKSSEM 440

Query: 121 NVLVPKGNGDY 131
           N+L+P+ +GDY
Sbjct: 441 NILIPQ-DGDY 450

May have a regulatory bifunctional role.

Homo sapiens (taxid: 9606)

>sp|Q5R5X8|CAP2_PONAB Adenylyl cyclase-associated protein 2 OS=Pongo abelii GN=CAP2 PE=2 SV=1

 Score =  112 bits (280), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 30/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y+F C  ST+ +KGK+NS+ +D+CKK  +VFD++V  VE +N Q +Q+QV+G+VP
Sbjct: 350 LKQVAYIFKCEKSTLQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVP 409

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KT+GC +YLS ++L                             D EIVS+KSSEM
Sbjct: 410 TISINKTEGCHIYLSEDAL-----------------------------DCEIVSAKSSEM 440

Query: 121 NVLVPKGNGDY 131
           N+L+P+ +GDY
Sbjct: 441 NILIPQ-DGDY 450

May have a regulatory bifunctional role.

Pongo abelii (taxid: 9601)

>sp|Q5R8B4|CAP1_PONAB Adenylyl cyclase-associated protein 1 OS=Pongo abelii GN=CAP1 PE=2 SV=3

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CV++T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N   V++QV+GKVP
Sbjct: 347 LKQVAYIYKCVSTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSGDVKVQVMGKVP 406

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  SLD                  C           EIVS+KSSEM
Sbjct: 407 TISINKTDGCHAYLSKNSLD------------------C-----------EIVSAKSSEM 437

Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 438 NVLIPTEGGDF 448

Directly regulates filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localization and the establishment of cell polarity.

Pongo abelii (taxid: 9601)

>sp|P52481|CAP2_RAT Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus GN=Cap2 PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 30/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y+F C  ST+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + +Q+QV+G+VP
Sbjct: 350 LKQVAYIFKCDKSTLQIKGKVNSITVDNCKKFGLVFDHVVGIVEVINSKDIQIQVMGRVP 409

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KT+GC +YLS ++L                             D EIVS+KSSEM
Sbjct: 410 TISINKTEGCHLYLSKDAL-----------------------------DCEIVSAKSSEM 440

Query: 121 NVLVPKGNGDY 131
           NVLVP+G+ DY
Sbjct: 441 NVLVPQGD-DY 450

May have a regulatory bifunctional role.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
91094307	416	PREDICTED: similar to GA18629-PA [Tribol	0.700	0.247	0.681	1e-42
124487740	304	putative adenylate cyclase-associated pr	0.693	0.335	0.648	4e-39
307172709	692	Adenylyl cyclase-associated protein 1 [C	0.693	0.147	0.625	5e-39
307199406	828	Adenylyl cyclase-associated protein 1 [H	0.693	0.123	0.641	4e-38
170033290	624	adenylyl cyclase-associated protein [Cul	0.700	0.165	0.646	1e-37
157168009	668	adenylyl cyclase-associated protein [Aed	0.700	0.154	0.639	2e-37
242017696	430	adenylyl cyclase-associated protein, put	0.693	0.237	0.625	2e-37
332373620	415	unknown [Dendroctonus ponderosae]	0.707	0.250	0.604	4e-37
193662091	418	PREDICTED: adenylyl cyclase-associated p	0.693	0.244	0.618	7e-37
157130609	211	adenylyl cyclase-associated protein [Aed	0.700	0.488	0.639	2e-36

>gi|91094307|ref|XP_972149.1| PREDICTED: similar to GA18629-PA [Tribolium castaneum] gi|270014410|gb|EFA10858.1| hypothetical protein TcasGA2_TC001635 [Tribolium castaneum]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/132 (68%), Positives = 99/132 (75%), Gaps = 29/132 (21%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVY+F C +STVVVKGKLNS+ +DSCKK+S+VFDSLVS++EF+NCQSVQMQVLGKVP
Sbjct: 287 MNNVVYLFKCTDSTVVVKGKLNSITLDSCKKTSIVFDSLVSAMEFINCQSVQMQVLGKVP 346

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLSPESL                             DVEIVSSKSSEM
Sbjct: 347 TISIDKTDGCQMYLSPESL-----------------------------DVEIVSSKSSEM 377

Query: 121 NVLVPKGNGDYV 132
           NVLVPKGNGDY 
Sbjct: 378 NVLVPKGNGDYT 389

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|124487740|gb|ABN11957.1| putative adenylate cyclase-associated protein 1 [Maconellicoccus hirsutus]

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVYMFNC N T+ VKGK+NS+F+DSC+KSSVVFD++VSS EFVNCQSVQMQVLG VP
Sbjct: 176 MNNVVYMFNCTNCTLTVKGKINSIFLDSCRKSSVVFDTVVSSAEFVNCQSVQMQVLGNVP 235

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLS                              +SL VEI+SSKSSEM
Sbjct: 236 TISIDKTDGCQMYLS-----------------------------EKSLGVEIISSKSSEM 266

Query: 121 NVLVPKGNGDY 131
           NVL+PKGNGDY
Sbjct: 267 NVLIPKGNGDY 277

Source: Maconellicoccus hirsutus

Species: Maconellicoccus hirsutus

Genus: Maconellicoccus

Family: Pseudococcidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172709|gb|EFN64022.1| Adenylyl cyclase-associated protein 1 [Camponotus floridanus]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/131 (62%), Positives = 96/131 (73%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNV+YMF C +ST+ +KGK+NS+ MDSC+KSSVVFDSLVSS+EFVNCQSVQMQVLGKVP
Sbjct: 564 MNNVIYMFRCQDSTLTIKGKINSIVMDSCRKSSVVFDSLVSSIEFVNCQSVQMQVLGKVP 623

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYL+ ES                             L+VE+++SKSSEM
Sbjct: 624 TISIDKTDGCQMYLNTES-----------------------------LNVELITSKSSEM 654

Query: 121 NVLVPKGNGDY 131
           NV+VPK NGDY
Sbjct: 655 NVMVPKANGDY 665

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199406|gb|EFN80031.1| Adenylyl cyclase-associated protein 1 [Harpegnathos saltator]

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 84/131 (64%), Positives = 96/131 (73%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVY+F C +ST+ VKGK+NSV MDSC+KSS+VFDSLVSS+EFVNCQSVQMQVLGKVP
Sbjct: 700 MNNVVYIFRCQDSTLTVKGKVNSVVMDSCRKSSIVFDSLVSSIEFVNCQSVQMQVLGKVP 759

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLS +SL                             DVE+++SKSSEM
Sbjct: 760 TISIDKTDGCQMYLSADSL-----------------------------DVELITSKSSEM 790

Query: 121 NVLVPKGNGDY 131
           NV+VPK NGDY
Sbjct: 791 NVMVPKANGDY 801

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170033290|ref|XP_001844511.1| adenylyl cyclase-associated protein [Culex quinquefasciatus] gi|167873918|gb|EDS37301.1| adenylyl cyclase-associated protein [Culex quinquefasciatus]

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/133 (64%), Positives = 94/133 (70%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVYMF C NST+ +KGK+NSV MDSCKK S+VFDSLV+S EFVNCQSVQMQVLGKVP
Sbjct: 495 MNNVVYMFRCENSTLQIKGKINSVVMDSCKKCSLVFDSLVASAEFVNCQSVQMQVLGKVP 554

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLS +                             SL VEIVSSKSSEM
Sbjct: 555 TISIDKTDGCQMYLSAD-----------------------------SLAVEIVSSKSSEM 585

Query: 121 NVLVPKG-NGDYV 132
           NV++PKG NGDY 
Sbjct: 586 NVMIPKGTNGDYT 598

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157168009|ref|XP_001663284.1| adenylyl cyclase-associated protein [Aedes aegypti] gi|108870497|gb|EAT34722.1| AAEL013074-PA [Aedes aegypti]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 95/133 (71%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVYMF C NST+ +KGK+NSV MDSCKK S+VFDSLV+S EFVNCQSVQMQVLGKVP
Sbjct: 539 MNNVVYMFRCENSTLQIKGKINSVVMDSCKKCSLVFDSLVASAEFVNCQSVQMQVLGKVP 598

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLS +S                             L VEIVSSKSSEM
Sbjct: 599 TISIDKTDGCQMYLSADS-----------------------------LGVEIVSSKSSEM 629

Query: 121 NVLVPKG-NGDYV 132
           NV++PKG +GDY+
Sbjct: 630 NVMIPKGTSGDYI 642

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017696|ref|XP_002429323.1| adenylyl cyclase-associated protein, putative [Pediculus humanus corporis] gi|212514226|gb|EEB16585.1| adenylyl cyclase-associated protein, putative [Pediculus humanus corporis]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/131 (62%), Positives = 95/131 (72%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVY F C +ST+VVKGK+NS+F+DSCKK++VVFDS+VSS+EFVNCQSVQMQVLG VP
Sbjct: 302 MNNVVYAFKCTDSTLVVKGKINSIFLDSCKKTAVVFDSVVSSIEFVNCQSVQMQVLGAVP 361

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQ+YLS +S                             L+VEIVSSKSSEM
Sbjct: 362 TISIDKTDGCQIYLSQDS-----------------------------LNVEIVSSKSSEM 392

Query: 121 NVLVPKGNGDY 131
           NVLVP G GD+
Sbjct: 393 NVLVPTGTGDF 403

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373620|gb|AEE61951.1| unknown [Dendroctonus ponderosae]

 Score =  159 bits (401), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/134 (60%), Positives = 98/134 (73%), Gaps = 30/134 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVY+F C NSTV V+GK+NS+ MDSCKK+S+VFD+LVSS+EF+NCQSVQMQV+GKVP
Sbjct: 287 MNNVVYLFKCENSTVQVRGKINSITMDSCKKTSIVFDNLVSSMEFINCQSVQMQVMGKVP 346

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           T+SIDKTDGCQ+YLS ESL                             DVEI+SSKSSEM
Sbjct: 347 TVSIDKTDGCQVYLSNESL-----------------------------DVEIISSKSSEM 377

Query: 121 NVLVPKGNGDYVSN 134
           N+L+PKG+ DYV +
Sbjct: 378 NILLPKGD-DYVEH 390

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193662091|ref|XP_001947404.1| PREDICTED: adenylyl cyclase-associated protein 1-like isoform 1 [Acyrthosiphon pisum] gi|328708198|ref|XP_003243622.1| PREDICTED: adenylyl cyclase-associated protein 1-like isoform 2 [Acyrthosiphon pisum] gi|328708201|ref|XP_003243623.1| PREDICTED: adenylyl cyclase-associated protein 1-like isoform 3 [Acyrthosiphon pisum]

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 81/131 (61%), Positives = 93/131 (70%), Gaps = 29/131 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVY+F CVNST+ VK K+NS+ MDSCKKSSVVF+SLVSS EF+NCQSVQMQVLGKVP
Sbjct: 290 MNNVVYIFKCVNSTITVKNKINSIVMDSCKKSSVVFESLVSSAEFINCQSVQMQVLGKVP 349

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TI+IDKTDGCQMYLS +S                             L  EIV+SKSSE+
Sbjct: 350 TITIDKTDGCQMYLSKDS-----------------------------LTTEIVTSKSSEL 380

Query: 121 NVLVPKGNGDY 131
           NV+VPK +GDY
Sbjct: 381 NVMVPKADGDY 391

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157130609|ref|XP_001661940.1| adenylyl cyclase-associated protein [Aedes aegypti] gi|108871841|gb|EAT36066.1| AAEL011821-PB [Aedes aegypti]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 95/133 (71%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           MNNVVYMF C NST+ +KGK+NSV MDSCKK S+VFDSLV+S EFVNCQSVQMQVLGKVP
Sbjct: 82  MNNVVYMFRCENSTLQIKGKINSVVMDSCKKCSLVFDSLVASAEFVNCQSVQMQVLGKVP 141

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISIDKTDGCQMYLS +S                             L VEIVSSKSSEM
Sbjct: 142 TISIDKTDGCQMYLSADS-----------------------------LGVEIVSSKSSEM 172

Query: 121 NVLVPKG-NGDYV 132
           NV++PKG +GDY+
Sbjct: 173 NVMIPKGTSGDYI 185

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
FB|FBgn0261458	783	capt "capulet" [Drosophila mel	0.755	0.141	0.525	2.4e-23
UNIPROTKB|F1SMC0	376	CAP1 "Adenylyl cyclase-associa	0.632	0.247	0.473	6e-19
ZFIN|ZDB-GENE-030131-6459	463	cap1 "Cap1 CAP, adenylate cycl	0.632	0.200	0.483	1.1e-18
UNIPROTKB|A6QLB7	471	CAP1 "Adenylyl cyclase-associa	0.632	0.197	0.473	1.5e-18
UNIPROTKB|Q3SYV4	472	CAP1 "Adenylyl cyclase-associa	0.632	0.197	0.473	1.5e-18
ZFIN|ZDB-GENE-040426-1758	468	cap2 "CAP, adenylate cyclase-a	0.666	0.209	0.459	1.9e-18
UNIPROTKB|B7Z214	217	CAP2 "Adenylyl cyclase-associa	0.632	0.428	0.440	2.8e-18
UNIPROTKB|F1P2G4	451	F1P2G4 "Adenylyl cyclase-assoc	0.632	0.206	0.451	3.6e-18
DICTYBASE|DDB_G0288769	464	cap "cyclase associated protei	0.605	0.191	0.460	5.1e-18
UNIPROTKB|B7Z385	365	CAP2 "Adenylyl cyclase-associa	0.632	0.254	0.440	5.5e-18

FB|FBgn0261458 capt "capulet" [Drosophila melanogaster (taxid:7227)]

 Score = 279 (103.3 bits), Expect = 2.4e-23, P = 2.4e-23
 Identities = 61/116 (52%), Positives = 72/116 (62%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             MNNVVY+F C  ST+ VKGK+N++  DSCKK               NCQSVQMQVLG VP
Sbjct:   655 MNNVVYVFKCEGSTLTVKGKVNNIVFDSCKKCSLLFDSVVASVEFVNCQSVQMQVLGSVP 714

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI----DKTDGCQMYLSPESLDVEI 112
             T+SIDKTDGCQMYLS +SL VEIV  K   ++I    D  D  ++ L PE     I
Sbjct:   715 TVSIDKTDGCQMYLSKDSLGVEIVNSKSSEMNILLPDDSGDYTELAL-PEQYKTTI 769

GO:0008179 "adenylate cyclase binding" evidence=ISS

GO:0008407 "chaeta morphogenesis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0048749 "compound eye development" evidence=IMP

GO:0008154 "actin polymerization or depolymerization" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0003779 "actin binding" evidence=IEA;ISS

GO:0008103 "oocyte microtubule cytoskeleton polarization" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046716 "muscle cell homeostasis" evidence=IGI

GO:0072499 "photoreceptor cell axon guidance" evidence=IMP

GO:0042052 "rhabdomere development" evidence=IMP

UNIPROTKB|F1SMC0 CAP1 "Adenylyl cyclase-associated protein" [Sus scrofa (taxid:9823)]

 Score = 230 (86.0 bits), Expect = 6.0e-19, P = 6.0e-19
 Identities = 44/93 (47%), Positives = 61/93 (65%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F CVNST+ +KGK+NS+ +D+CKK               N + V++QV+GKVP
Sbjct:   248 LKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSRDVKVQVMGKVP 307

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KTDGC +YLS  SLD EIV  K   +++
Sbjct:   308 TISINKTDGCHIYLSKNSLDCEIVSAKSSEMNV 340

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

ZFIN|ZDB-GENE-030131-6459 cap1 "Cap1 CAP, adenylate cyclase-associated protein 1" [Danio rerio (taxid:7955)]

 Score = 231 (86.4 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 45/93 (48%), Positives = 61/93 (65%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  VVY F C NST+ VKGK+NS+ +D+CKK               NC+ V++QV+GKVP
Sbjct:   335 LKQVVYGFKCNNSTLQVKGKINSITLDNCKKMGLVFDDVVGIVEVINCRDVKIQVIGKVP 394

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KTDGC +YLS +SL  EIV  K   +++
Sbjct:   395 TISINKTDGCHVYLSKDSLSCEIVSAKSSEMNV 427

GO:0003779 "actin binding" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001756 "somitogenesis" evidence=IMP

GO:0007190 "activation of adenylate cyclase activity" evidence=ISS

GO:0003785 "actin monomer binding" evidence=ISS

GO:0008078 "mesodermal cell migration" evidence=IMP

UNIPROTKB|A6QLB7 CAP1 "Adenylyl cyclase-associated protein" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 44/93 (47%), Positives = 61/93 (65%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F CVNST+ +KGK+NS+ +D+CKK               N + V++QV+GKVP
Sbjct:   343 LKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 402

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KTDGC +YLS  SLD EIV  K   +++
Sbjct:   403 TISINKTDGCHVYLSKNSLDCEIVSAKSSEMNV 435

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|Q3SYV4 CAP1 "Adenylyl cyclase-associated protein 1" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 44/93 (47%), Positives = 61/93 (65%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F CVNST+ +KGK+NS+ +D+CKK               N + V++QV+GKVP
Sbjct:   344 LKQVAYIFKCVNSTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 403

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KTDGC +YLS  SLD EIV  K   +++
Sbjct:   404 TISINKTDGCHVYLSKNSLDCEIVSAKSSEMNV 436

GO:0005886 "plasma membrane" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1758 cap2 "CAP, adenylate cyclase-associated protein, 2 (yeast)" [Danio rerio (taxid:7955)]

 Score = 229 (85.7 bits), Expect = 1.9e-18, P = 1.9e-18
 Identities = 45/98 (45%), Positives = 64/98 (65%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  VVY+F+C  ST+ VKGK+NS+ +D+CKK               N + +Q+QV+GKVP
Sbjct:   340 LRQVVYVFSCSGSTLQVKGKVNSIIVDNCKKLGLVFDNVVGIVEIINSRDIQLQVMGKVP 399

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDG 98
             TISI+KT+GC +YLS +SLD EIV  K   ++I   +G
Sbjct:   400 TISINKTEGCHVYLSKDSLDCEIVSAKSSEMNILVPEG 437

GO:0003779 "actin binding" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

UNIPROTKB|B7Z214 CAP2 "Adenylyl cyclase-associated protein" [Homo sapiens (taxid:9606)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 41/93 (44%), Positives = 60/93 (64%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F C  ST+ +KGK+NS+ +D+CKK               N Q +Q+QV+G+VP
Sbjct:    90 LKQVAYIFKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVP 149

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KT+GC +YLS ++LD EIV  K   ++I
Sbjct:   150 TISINKTEGCHIYLSEDALDCEIVSAKSSEMNI 182

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

UNIPROTKB|F1P2G4 F1P2G4 "Adenylyl cyclase-associated protein" [Gallus gallus (taxid:9031)]

 Score = 226 (84.6 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/93 (45%), Positives = 60/93 (64%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F C NST+ +KGK+NS+ +D+CKK               N + +++QV+GKVP
Sbjct:   323 LKQVAYVFKCTNSTLQIKGKINSITLDNCKKLGLVFDDVVGIVEIINSRDIKVQVMGKVP 382

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KTDGC +YLS  SLD EIV  K   +++
Sbjct:   383 TISINKTDGCHVYLSKNSLDCEIVSAKSSEMNV 415

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0006898 "receptor-mediated endocytosis" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030864 "cortical actin cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0288769 cap "cyclase associated protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 225 (84.3 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 41/89 (46%), Positives = 58/89 (65%)

Query:     5 VYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVPTISI 64
             VY+F CVNS V +KGK+N++ +D CKK               NC  V++QV G+VP+I+I
Sbjct:   339 VYIFQCVNSLVQIKGKVNAITLDGCKKTSIVFENAISSCEVVNCNGVEIQVTGRVPSIAI 398

Query:    65 DKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             DKT GCQ+YLS +SL+ EIV  K   +++
Sbjct:   399 DKTSGCQIYLSKDSLETEIVSSKSSEMNV 427

GO:0005615 "extracellular space" evidence=IDA

GO:0031982 "vesicle" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007010 "cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|B7Z385 CAP2 "Adenylyl cyclase-associated protein" [Homo sapiens (taxid:9606)]

 Score = 221 (82.9 bits), Expect = 5.5e-18, P = 5.5e-18
 Identities = 41/93 (44%), Positives = 60/93 (64%)

Query:     1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
             +  V Y+F C  ST+ +KGK+NS+ +D+CKK               N Q +Q+QV+G+VP
Sbjct:   238 LKQVAYIFKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQIQVMGRVP 297

Query:    61 TISIDKTDGCQMYLSPESLDVEIVLGKVPTISI 93
             TISI+KT+GC +YLS ++LD EIV  K   ++I
Sbjct:   298 TISINKTEGCHIYLSEDALDCEIVSAKSSEMNI 330

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	147
pfam08603	157	pfam08603, CAP_C, Adenylate cyclase associated (CA	5e-44
smart00673	38	smart00673, CARP, Domain in CAPs (cyclase-associat	3e-08
smart00673	38	smart00673, CARP, Domain in CAPs (cyclase-associat	2e-05
smart00673	38	smart00673, CARP, Domain in CAPs (cyclase-associat	2e-05
pfam07986	119	pfam07986, TBCC, Tubulin binding cofactor C	0.002

>gnl|CDD|203997 pfam08603, CAP_C, Adenylate cyclase associated (CAP) C terminal

 Score =  141 bits (358), Expect = 5e-44
 Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +   VY+F C NST+ +KGK+N++ +D+CKK S+VFDSLVSSVE +NC+SV++QVLGKVP
Sbjct: 29  LKQSVYIFKCNNSTIQIKGKVNAISLDNCKKCSLVFDSLVSSVEVINCKSVKIQVLGKVP 88

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISID                             KTDGCQ+YLS ESL+ EIVSSKSSEM
Sbjct: 89  TISID-----------------------------KTDGCQIYLSKESLNTEIVSSKSSEM 119

Query: 121 NVLVPKG-NGDYV 132
           N+ VP G +GDY 
Sbjct: 120 NINVPTGEDGDYK 132

Length = 157

>gnl|CDD|197827 smart00673, CARP, Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 21/37 (56%), Positives = 24/37 (64%)

Query: 48 CQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIV 84
          C+S  +QV GKV TISIDK   C +YL P S   EIV
Sbjct: 1  CESCTIQVSGKVNTISIDKCKKCSIYLGPVSGSPEIV 37

Length = 38

>gnl|CDD|197827 smart00673, CARP, Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 18/32 (56%), Positives = 20/32 (62%)

Query: 83  IVLGKVPTISIDKTDGCQMYLSPESLDVEIVS 114
            V GKV TISIDK   C +YL P S   EIV+
Sbjct: 7   QVSGKVNTISIDKCKKCSIYLGPVSGSPEIVN 38

Length = 38

>gnl|CDD|197827 smart00673, CARP, Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 10 CVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVN 47
          C + T+ V GK+N++ +D CKK S+    +  S E VN
Sbjct: 1  CESCTIQVSGKVNTISIDKCKKCSIYLGPVSGSPEIVN 38

Length = 38

>gnl|CDD|219683 pfam07986, TBCC, Tubulin binding cofactor C

 Score = 35.7 bits (83), Expect = 0.002
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 9  NCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTD 68
          N  N T+ +   L+S+ +D+CK  +++   +  SV   +C++  + V  +   + I    
Sbjct: 8  NLSNCTIYLLDPLSSLTIDNCKDCTIILGPVSGSVFIRDCENCTIVVACR--QLRIHDCT 65

Query: 69 GCQMYLS 75
           C  YL 
Sbjct: 66 NCDFYLH 72

Members of this family are involved in the folding pathway of tubulins and form a beta helix structure. Length = 119

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PF08603	159	CAP_C: Adenylate cyclase associated (CAP) C termin	100.0
KOG2675|consensus	480		100.0
KOG2675|consensus	480		99.92
PF08603	159	CAP_C: Adenylate cyclase associated (CAP) C termin	99.88
smart00673	38	CARP Domain in CAPs (cyclase-associated proteins)	98.73
smart00673	38	CARP Domain in CAPs (cyclase-associated proteins)	98.28
PF07986	120	TBCC: Tubulin binding cofactor C; InterPro: IPR012	98.18
PF07986	120	TBCC: Tubulin binding cofactor C; InterPro: IPR012	97.31
KOG4416|consensus	605		84.97

>PF08603 CAP_C: Adenylate cyclase associated (CAP) C terminal; InterPro: IPR013912 Cyclase-associated proteins (CAPs) are highly conserved actin-binding proteins present in a wide range of organisms including yeast, fly, plants, and mammals

Probab=100.00  E-value=3e-39  Score=254.41  Aligned_cols=113  Identities=66%  Similarity=1.026  Sum_probs=98.5

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+|+||+|+|++++|+|+.++|+++|+++++.||+++++|+.|++|+|++|+|+++          
T Consensus        31 ~~qsVyI~~C~n~~i~IkgKvnsItid~C~k~~vv~ds~Is~vEvinc~~~~vQv~g~vPti~iDktdg~----------  100 (159)
T PF08603_consen   31 MKQSVYIYNCKNSTIQIKGKVNSITIDNCKKCSVVFDSVISSVEVINCKSVQVQVLGKVPTISIDKTDGC----------  100 (159)
T ss_dssp             TT-EEEEEEEESEEEEEESEBSEEEEEEEEEEEEEECEBSSEEEEESEEEEEEEESS--SEEEEES-EEE----------
T ss_pred             CCcEEEEEcccccEEEECceEEEEEEEcCCcEEEEEcCEEEEEEEEecCcEeEEEEccCCEEEEeccccE----------
Confidence            7999999999999999999999999999999999999999999999999999999988888888888777          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccceee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAFIV  143 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f~~  143 (147)
                                         ++|||+++++++|++|||++|||++|. ++|||+|+|+ ||||.-
T Consensus       101 -------------------~iyLsk~s~~~eivtskss~mNv~~p~~~~~D~~E~pi-PEQf~~  144 (159)
T PF08603_consen  101 -------------------QIYLSKESLDTEIVTSKSSEMNVNVPDGEDGDYVEHPI-PEQFKT  144 (159)
T ss_dssp             -------------------EEE--CCCTT-EEEEES-EEEEEEEECSCTTEEEEEEE---EEEE
T ss_pred             -------------------EEEECcccccEEEEEEccccEEEEecCCCCCCceeCCC-chhEEE
Confidence                               999999999999999999999999998 7899999999 999974

CAPs are multifunctional proteins that contain several structural domains. CAP is involved in species-specific signalling pathways [, , , ]. In Drosophila, CAP functions in Hedgehog-mediated eye development and in establishing oocyte polarity. In Dictyostelium (slim mold), CAP is involved in microfilament reorganisation near the plasma membrane in a PIP2-regulated manner and is required to perpetuate the cAMP relay signal to organise fruitbody formation. In plants, CAP is involved in plant signalling pathways required for co-ordinated organ expansion. In yeast, CAP is involved in adenylate cyclase activation, as well as in vesicle trafficking and endocytosis. In both yeast and mammals, CAPs appear to be involved in recycling G-actin monomers from ADF/cofilins for subsequent rounds of filament assembly [, ]. In mammals, there are two different CAPs (CAP1 and CAP2) that share 64% amino acid identity. All CAPs appear to contain a C-terminal actin-binding domain that regulates actin remodelling in response to cellular signals and is required for normal cellular morphology, cell division, growth and locomotion in eukaryotes. CAP directly regulates actin filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localisation and the establishment of cell polarity. Actin exists both as globular (G) (monomeric) actin subunits and assembled into filamentous (F) actin. In cells, actin cycles between these two forms. Proteins that bind F-actin often regulate F-actin assembly and its interaction with other proteins, while proteins that interact with G-actin often control the availability of unpolymerised actin. CAPs bind G-actin. In addition to actin-binding, CAPs can have additional roles, and may act as bifunctional proteins. In Saccharomyces cerevisiae (Baker's yeast), CAP is a component of the adenylyl cyclase complex (Cyr1p) that serves as an effector of Ras during normal cell signalling. S. cerevisiae CAP functions to expose adenylate cyclase binding sites to Ras, thereby enabling adenylate cyclase to be activated by Ras regulatory signals. In Schizosaccharomyces pombe (Fission yeast), CAP is also required for adenylate cyclase activity, but not through the Ras pathway. In both organisms, the N-terminal domain is responsible for adenylate cyclase activation, but the S cerevisiae and S. pombe N-termini cannot complement one another. Yeast CAPs are unique among the CAP family of proteins, because they are the only ones to directly interact with and activate adenylate cyclase []. S. cerevisiae CAP has four major domains. In addition to the N-terminal adenylate cyclase-interacting domain, and the C-terminal actin-binding domain, it possesses two other domains: a proline-rich domain that interacts with Src homology 3 (SH3) domains of specific proteins, and a domain that is responsible for CAP oligomerisation to form multimeric complexes (although oligomerisation appears to involve the N- and C-terminal domains as well). The proline-rich domain interacts with profilin, a protein that catalyses nucleotide exchange on G-actin monomers and promotes addition to barbed ends of filamentous F-actin []. Since CAP can bind profilin via a proline-rich domain, and G-actin via a C-terminal domain, it has been suggested that a ternary G-actin/CAP/profilin complex could be formed. This entry represents the C-terminal domain of CAP proteins, which is responsible for G-actin-binding. This domain has a superhelical structure, where the superhelix turns are made of two beta-strands each []. ; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1K4Z_B 1KQ5_A 2B0R_A 1K8F_B.

>KOG2675|consensus

Probab=100.00  E-value=4.3e-38  Score=278.77  Aligned_cols=112  Identities=60%  Similarity=0.987  Sum_probs=97.9

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      +||++|||+|+|++|+||||+|+|+|++|+|+.|+||++|..++|.||+++.||+.|++|+|+||+|++|          
T Consensus       352 ~kqsvyIykC~~s~iqIkGKvNsItld~Ckk~svVfD~~Va~~eiinc~~v~iQv~g~~PtiSI~ktdGc----------  421 (480)
T KOG2675|consen  352 LKQSVYIYKCSNSTIQIKGKVNSITLDNCKKTSVVFDDLVAIVEIINCQDVQIQVMGSVPTISIDKTDGC----------  421 (480)
T ss_pred             ccceEEEEeccceEEEEeceeeeEEecCCceeeEEEeccceeeEEeeccceeeEEcccCCeEEEecCCCe----------
Confidence            4788888888888888888888888888888888888888888888888888877766666666665555          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCccccee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAFI  142 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f~  142 (147)
                                         ++|||++|++|||++|||++|||++|. ++|||.|+|+ ||||-
T Consensus       422 -------------------~iYLSk~sL~~eIvtsKSsemNi~vp~~~dgDy~Efpv-PEQfk  464 (480)
T KOG2675|consen  422 -------------------HIYLSKDSLDCEIVTSKSSEMNINVPTNEDGDYVEFPV-PEQFK  464 (480)
T ss_pred             -------------------eEEeccccccceEEeecccceeEecccCCCCCcccccC-hHHHh
Confidence                               999999999999999999999999997 7899999999 99994

>KOG2675|consensus

Probab=99.92  E-value=7e-25  Score=194.93  Aligned_cols=95  Identities=29%  Similarity=0.449  Sum_probs=87.1

Q ss_pred             EEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--------CcceeE-EeeCCcceEEE
Q psy17499         23 SVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--------ESLDVE-IVLGKVPTISI   93 (147)
Q Consensus        23 sI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--------ss~~v~-qV~G~vPtI~I   93 (147)
                      .+.|+.|++.+        ++|||+|.+++|||+||+|+|++|+|+|++||||+        +|.+++ |++|.+|||+|
T Consensus       344 ~~Vi~~~e~kq--------svyIykC~~s~iqIkGKvNsItld~Ckk~svVfD~~Va~~eiinc~~v~iQv~g~~PtiSI  415 (480)
T KOG2675|consen  344 NLVIDDAELKQ--------SVYIYKCSNSTIQIKGKVNSITLDNCKKTSVVFDDLVAIVEIINCQDVQIQVMGSVPTISI  415 (480)
T ss_pred             ceeeeeccccc--------eEEEEeccceEEEEeceeeeEEecCCceeeEEEeccceeeEEeeccceeeEEcccCCeEEE
Confidence            66677776666        99999999999999999999999999999999999        355666 79999999999


Q ss_pred             eccccceeeeCCCCCceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499         94 DKTDGCQMYLSPESLDVEIVSSK-SSEMNVLVPKGNGDYVSNQS  136 (147)
Q Consensus        94 DKtdg~~~yls~es~~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~  136 (147)
                      |||           +||+||||| |.+.+|+++|++..|+..|.
T Consensus       416 ~kt-----------dGc~iYLSk~sL~~eIvtsKSsemNi~vp~  448 (480)
T KOG2675|consen  416 DKT-----------DGCHIYLSKDSLDCEIVTSKSSEMNINVPT  448 (480)
T ss_pred             ecC-----------CCeeEEeccccccceEEeecccceeEeccc
Confidence            999           999999999 99999999999999999886

>PF08603 CAP_C: Adenylate cyclase associated (CAP) C terminal; InterPro: IPR013912 Cyclase-associated proteins (CAPs) are highly conserved actin-binding proteins present in a wide range of organisms including yeast, fly, plants, and mammals

Probab=99.88  E-value=1.1e-22  Score=160.37  Aligned_cols=93  Identities=37%  Similarity=0.542  Sum_probs=74.7

Q ss_pred             ccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--Cccee------E-EeeCCcceEEEeccccceeeeCCCCC
Q psy17499         38 SLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDV------E-IVLGKVPTISIDKTDGCQMYLSPESL  108 (147)
Q Consensus        38 ~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v------~-qV~G~vPtI~IDKtdg~~~yls~es~  108 (147)
                      ++-|+|||++|++++|+|+||+|+|++|+|++++++||+  |++++      + |++|++|||+||||           +
T Consensus        30 ~~~qsVyI~~C~n~~i~IkgKvnsItid~C~k~~vv~ds~Is~vEvinc~~~~vQv~g~vPti~iDkt-----------d   98 (159)
T PF08603_consen   30 EMKQSVYIYNCKNSTIQIKGKVNSITIDNCKKCSVVFDSVISSVEVINCKSVQVQVLGKVPTISIDKT-----------D   98 (159)
T ss_dssp             -TT-EEEEEEEESEEEEEESEBSEEEEEEEEEEEEEECEBSSEEEEESEEEEEEEESS--SEEEEES------------E
T ss_pred             CCCcEEEEEcccccEEEECceEEEEEEEcCCcEEEEEcCEEEEEEEEecCcEeEEEEccCCEEEEecc-----------c
Confidence            345599999999999999999999999999999999999  54443      3 79999999999999           8


Q ss_pred             ceEEEEee-ccceEEEeeCCCCceeeccC-cccce
Q psy17499        109 DVEIVSSK-SSEMNVLVPKGNGDYVSNQS-VLGAF  141 (147)
Q Consensus       109 ~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~-~~~~f  141 (147)
                      |++||+|| |.+++|+++++++.|+.+|. -.+.|
T Consensus        99 g~~iyLsk~s~~~eivtskss~mNv~~p~~~~~D~  133 (159)
T PF08603_consen   99 GCQIYLSKESLDTEIVTSKSSEMNVNVPDGEDGDY  133 (159)
T ss_dssp             EEEEE--CCCTT-EEEEES-EEEEEEEECSCTTEE
T ss_pred             cEEEEECcccccEEEEEEccccEEEEecCCCCCCc
Confidence            99999999 88999999999999999987 34445

CAPs are multifunctional proteins that contain several structural domains. CAP is involved in species-specific signalling pathways [, , , ]. In Drosophila, CAP functions in Hedgehog-mediated eye development and in establishing oocyte polarity. In Dictyostelium (slim mold), CAP is involved in microfilament reorganisation near the plasma membrane in a PIP2-regulated manner and is required to perpetuate the cAMP relay signal to organise fruitbody formation. In plants, CAP is involved in plant signalling pathways required for co-ordinated organ expansion. In yeast, CAP is involved in adenylate cyclase activation, as well as in vesicle trafficking and endocytosis. In both yeast and mammals, CAPs appear to be involved in recycling G-actin monomers from ADF/cofilins for subsequent rounds of filament assembly [, ]. In mammals, there are two different CAPs (CAP1 and CAP2) that share 64% amino acid identity. All CAPs appear to contain a C-terminal actin-binding domain that regulates actin remodelling in response to cellular signals and is required for normal cellular morphology, cell division, growth and locomotion in eukaryotes. CAP directly regulates actin filament dynamics and has been implicated in a number of complex developmental and morphological processes, including mRNA localisation and the establishment of cell polarity. Actin exists both as globular (G) (monomeric) actin subunits and assembled into filamentous (F) actin. In cells, actin cycles between these two forms. Proteins that bind F-actin often regulate F-actin assembly and its interaction with other proteins, while proteins that interact with G-actin often control the availability of unpolymerised actin. CAPs bind G-actin. In addition to actin-binding, CAPs can have additional roles, and may act as bifunctional proteins. In Saccharomyces cerevisiae (Baker's yeast), CAP is a component of the adenylyl cyclase complex (Cyr1p) that serves as an effector of Ras during normal cell signalling. S. cerevisiae CAP functions to expose adenylate cyclase binding sites to Ras, thereby enabling adenylate cyclase to be activated by Ras regulatory signals. In Schizosaccharomyces pombe (Fission yeast), CAP is also required for adenylate cyclase activity, but not through the Ras pathway. In both organisms, the N-terminal domain is responsible for adenylate cyclase activation, but the S cerevisiae and S. pombe N-termini cannot complement one another. Yeast CAPs are unique among the CAP family of proteins, because they are the only ones to directly interact with and activate adenylate cyclase []. S. cerevisiae CAP has four major domains. In addition to the N-terminal adenylate cyclase-interacting domain, and the C-terminal actin-binding domain, it possesses two other domains: a proline-rich domain that interacts with Src homology 3 (SH3) domains of specific proteins, and a domain that is responsible for CAP oligomerisation to form multimeric complexes (although oligomerisation appears to involve the N- and C-terminal domains as well). The proline-rich domain interacts with profilin, a protein that catalyses nucleotide exchange on G-actin monomers and promotes addition to barbed ends of filamentous F-actin []. Since CAP can bind profilin via a proline-rich domain, and G-actin via a C-terminal domain, it has been suggested that a ternary G-actin/CAP/profilin complex could be formed. This entry represents the C-terminal domain of CAP proteins, which is responsible for G-actin-binding. This domain has a superhelical structure, where the superhelix turns are made of two beta-strands each []. ; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1K4Z_B 1KQ5_A 2B0R_A 1K8F_B.

>smart00673 CARP Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product

Probab=98.73  E-value=2.1e-08  Score=60.77  Aligned_cols=28  Identities=57%  Similarity=0.953  Sum_probs=23.4

Q ss_pred             eeeeEEEEeceeceEEEEccCCeeeecc
Q psy17499         48 CQSVQMQVLGKVPTISIDKTDGCQMYLS   75 (147)
Q Consensus        48 C~~~~IqVkGKvnsIsidkc~k~~lv~d   75 (147)
                      |+++++|++||+|++++|+|+++.++|+
T Consensus         1 C~~~~i~v~g~~~~v~id~~~~~~i~l~   28 (38)
T smart00673        1 CESCTIQVSGKVNTISIDKCKKCSIYLG   28 (38)
T ss_pred             CCcEEEEEeCccCEEEEECCCCeEEEEC
Confidence            7899999999999999999999944433

>smart00673 CARP Domain in CAPs (cyclase-associated proteins) and X-linked retinitis pigmentosa 2 gene product

Probab=98.28  E-value=1.5e-06  Score=52.61  Aligned_cols=38  Identities=39%  Similarity=0.709  Sum_probs=35.9

Q ss_pred             ecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEe
Q psy17499         10 CVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVN   47 (147)
Q Consensus        10 c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~n   47 (147)
                      |++++|+++||++++.|++|+++++.+.....+++|.+
T Consensus         1 C~~~~i~v~g~~~~v~id~~~~~~i~l~~~~~s~~i~~   38 (38)
T smart00673        1 CESCTIQVSGKVNTISIDKCKKCSIYLGPVSGSPEIVN   38 (38)
T ss_pred             CCcEEEEEeCccCEEEEECCCCeEEEECCceeEEEEEC
Confidence            89999999999999999999999999999999998864

>PF07986 TBCC: Tubulin binding cofactor C; InterPro: IPR012945 This domain is found in tubulin-binding cofactor C (or tubulin-specific chaperone C) (TBCC)

Probab=98.18  E-value=3.4e-05  Score=57.26  Aligned_cols=70  Identities=30%  Similarity=0.582  Sum_probs=53.7

Q ss_pred             ceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499          3 NVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL   74 (147)
Q Consensus         3 ~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~   74 (147)
                      +.+.+.||.+++|.+.+.+.++.|.+|+++.|.+-..-.++.|.+|+++++.+.  ...+.+.+|..+.+.+
T Consensus         2 ~~~~i~n~~~c~I~l~~~~~~v~i~~~~~c~i~~g~v~gsv~i~~c~n~~i~~~--~~QlRih~~~n~~~~l   71 (120)
T PF07986_consen    2 SDVTISNCSNCTIYLLDPLSSVHIDNCKNCTIVLGPVSGSVFIENCENCTIIVA--CRQLRIHNSTNCTFYL   71 (120)
T ss_dssp             -EEEEES-BS-EEEE-S-BS-EEEES-BS-EEEEEEECCEEEEES-ECEEEEEE--ECEEEEES-ECEEEEE
T ss_pred             CcEEEecCcCCEEEeCCCcceEEEeCCCCCEEEEeecCceEEEecCCceEEEEE--cCCeEEccccceEEEE
Confidence            578999999999999999999999999999999987888999999999999985  4699999999994443

TBCC is a folding cofactor that participates in tubulin biogenesis along with the other tubulin folding cofactors A (TBCA), B (TBCB), E (TBCE) and D (TBCD), as well as the GTP-binding protein Arl2 [, ].; PDB: 2BX6_A 3BH7_B 3BH6_B 2YUH_A.

>PF07986 TBCC: Tubulin binding cofactor C; InterPro: IPR012945 This domain is found in tubulin-binding cofactor C (or tubulin-specific chaperone C) (TBCC)

Probab=97.31  E-value=0.002  Score=47.74  Aligned_cols=53  Identities=17%  Similarity=0.404  Sum_probs=39.0

Q ss_pred             cEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499         22 NSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL   74 (147)
Q Consensus        22 nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~   74 (147)
                      +++.|.+|+++.|.+.+...++.|.+|++++|.+----.++.+++|.++.+++
T Consensus         2 ~~~~i~n~~~c~I~l~~~~~~v~i~~~~~c~i~~g~v~gsv~i~~c~n~~i~~   54 (120)
T PF07986_consen    2 SDVTISNCSNCTIYLLDPLSSVHIDNCKNCTIVLGPVSGSVFIENCENCTIIV   54 (120)
T ss_dssp             -EEEEES-BS-EEEE-S-BS-EEEES-BS-EEEEEEECCEEEEES-ECEEEEE
T ss_pred             CcEEEecCcCCEEEeCCCcceEEEeCCCCCEEEEeecCceEEEecCCceEEEE
Confidence            47899999999999999999999999999999885567789999999997664

TBCC is a folding cofactor that participates in tubulin biogenesis along with the other tubulin folding cofactors A (TBCA), B (TBCB), E (TBCE) and D (TBCD), as well as the GTP-binding protein Arl2 [, ].; PDB: 2BX6_A 3BH7_B 3BH6_B 2YUH_A.

>KOG4416|consensus

Probab=84.97  E-value=1.8  Score=40.73  Aligned_cols=72  Identities=21%  Similarity=0.399  Sum_probs=62.5

Q ss_pred             ceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC
Q psy17499          3 NVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP   76 (147)
Q Consensus         3 ~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~   76 (147)
                      -+|-+-+|+.+.|-.=.-+-.+.+++|.+..+++-..=-++.+.+|.++.+.+  -++-|.|-+|+.|...+-.
T Consensus       335 ~sVkv~~Cnes~iyLl~plr~~tv~~c~~s~~Vlg~agkt~~~h~c~rV~vi~--~~~Ri~I~~~~ecvff~~v  406 (605)
T KOG4416|consen  335 RSVKVPNCNESVIYLLAPLRYATVFGCSDSTIVLGAAGKTTKVHHCERVHVIV--AIKRICIANCRECVFFLGV  406 (605)
T ss_pred             ceeeecccchhhhhhhcCcceeeeeccCCceEEEecccceeeeccccceEEEE--EeeeEEEecccceEEEecc
Confidence            36778899999998888889999999999999999999999999999987755  5889999999998765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
1k8f_A	157	Crystal Structure Of The Human C-Terminal Cap1-Aden		2e-20
1kq5_A	159	C-Terminal Domain Of Cyclase Associated Protein Wit		4e-09
1k4z_A	159	C-Terminal Domain Of Cyclase Associated Protein Len		5e-09
2b0r_A	202	Crystal Structure Of Cyclase-Associated Protein Fro		7e-08

>pdb|1K8F|A Chain A, Crystal Structure Of The Human C-Terminal Cap1-Adenylyl Cyclase Associated Protein Length = 157

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 29/131 (22%)
Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK               N + V++QV+GKVP
Sbjct: 29  LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 88
Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+KTDGC  YLS  S                             LD EIVS+KSSEM
Sbjct: 89  TISINKTDGCHAYLSKNS-----------------------------LDCEIVSAKSSEM 119
Query: 121 NVLVPKGNGDY 131
           NVL+P   GD+
Sbjct: 120 NVLIPTEGGDF 130

>pdb|1KQ5|A Chain A, C-Terminal Domain Of Cyclase Associated Protein With Pro 505 Replaced By Ser (P505s) Length = 159

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 48  CQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGK---------VPTISIDKTDG 98
           C  V +Q+ GKV  IS+ +T+ C + L      ++++            +P ISIDK+DG
Sbjct: 39  CSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDG 98
Query: 99  CQMYLSPESLDVEIVSSKSSEMNVLVPKG-NGDYV 132
             +YLS ESL+ EI +S S+ +NV +P G + DYV
Sbjct: 99  GNIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYV 133

>pdb|1K4Z|A Chain A, C-Terminal Domain Of Cyclase Associated Protein Length = 159

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 48  CQSVQMQVLGKVPTISIDKTDGCQMYLSPESLDVEIVLGK---------VPTISIDKTDG 98
           C  V +Q+ GKV  IS+ +T+ C + L      ++++            +P ISIDK+DG
Sbjct: 39  CSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDG 98
Query: 99  CQMYLSPESLDVEIVSSKSSEMNVLVPKG-NGDYV 132
             +YLS ESL+ EI +S S+ +NV +P G + DYV
Sbjct: 99  GNIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYV 133

>pdb|2B0R|A Chain A, Crystal Structure Of Cyclase-Associated Protein From Cryptosporidium Parvum Length = 202

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 30/121 (24%)
Query: 12  NSTVVVKGKLNSVFMDSCKKXXXXXXXXXXXXXXXNCQSVQMQVLGKVPTISIDKTDGCQ 71
           NS ++V+ K+NS+F++                   NC      V G + +I I   D  +
Sbjct: 82  NSRIIVEQKVNSIFIE-------------------NCVGCIFLVNGVISSIEIVNCDDIK 122
Query: 72  MYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVP-KGNGD 130
           + ++          G VPTIS+DK++   +Y S E  +VE+ SSKSSEMN+L P +  GD
Sbjct: 123 LQMT----------GIVPTISLDKSNKVNIYTSKEGKNVEVYSSKSSEMNLLFPGEEEGD 172
Query: 131 Y 131
           +
Sbjct: 173 W 173

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
1k8f_A	157	CAP, adenylyl cyclase-associated protein; actin bi	4e-36
2b0r_A	202	Possible adenyl cyclase-associated protein; struct	2e-35
1k4z_A	159	CAP, adenylyl cyclase-associated protein; right-ha	2e-34
3bh7_B	352	Protein XRP2; protein-protein complex, GTPase acti	7e-09
2yuh_A	179	Tubulin-specific chaperone C; microtubule, beta-tu	4e-05

>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1 Length = 157

 Score =  120 bits (303), Expect = 4e-36
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 29/132 (21%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 29  LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 88

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+                             KTDGC  YLS  SLD EIVS+KSSEM
Sbjct: 89  TISIN-----------------------------KTDGCHAYLSKNSLDCEIVSAKSSEM 119

Query: 121 NVLVPKGNGDYV 132
           NVL+P   GD+ 
Sbjct: 120 NVLIPTEGGDFN 131

>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum} Length = 202

 Score =  120 bits (303), Expect = 2e-35
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           + N V +    NS ++V+ K+NS+F+++C     + + ++SS+E VNC  +++Q+ G VP
Sbjct: 71  IKNKVSVRCSQNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMTGIVP 130

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TIS+D                             K++   +Y S E  +VE+ SSKSSEM
Sbjct: 131 TISLD-----------------------------KSNKVNIYTSKEGKNVEVYSSKSSEM 161

Query: 121 NVLVPKG-NGDYV 132
           N+L P    GD+ 
Sbjct: 162 NLLFPGEEEGDWK 174

>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A Length = 159

 Score =  116 bits (293), Expect = 2e-34
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
            +  +++  C    V +KGK+N++ +   +  SVV DS +S ++ +      +QV   +P
Sbjct: 30  KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLP 89

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
            ISID                             K+DG  +YLS ESL+ EI +S S+ +
Sbjct: 90  QISID-----------------------------KSDGGNIYLSKESLNTEIYTSCSTAI 120

Query: 121 NVLVPKG-NGDYV 132
           NV +P G + DYV
Sbjct: 121 NVNLPIGEDDDYV 133

>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A Length = 352

 Score = 52.2 bits (124), Expect = 7e-09
 Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 2   NNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPT 61
                + +C N  + +     +V +D C    +    +  SV F NC+  +  +      
Sbjct: 61  GQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTL--ACQQ 118

Query: 62  ISIDKTDGCQMYLSPES 78
             +      +++L   +
Sbjct: 119 FRVRDCRKLEVFLCCAT 135

>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 179

 Score = 40.5 bits (94), Expect = 4e-05
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 2/74 (2%)

Query: 5   VYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISI 64
           V +    N TV + G  N++ +       ++   + +SV   +C    + V  +   + I
Sbjct: 33  VLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQ--QLRI 90

Query: 65  DKTDGCQMYLSPES 78
             T   +++L   S
Sbjct: 91  HSTKDTRIFLQVTS 104

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
1k8f_A	157	CAP, adenylyl cyclase-associated protein; actin bi	100.0
1k4z_A	159	CAP, adenylyl cyclase-associated protein; right-ha	100.0
2b0r_A	202	Possible adenyl cyclase-associated protein; struct	100.0
1k4z_A	159	CAP, adenylyl cyclase-associated protein; right-ha	99.92
1k8f_A	157	CAP, adenylyl cyclase-associated protein; actin bi	99.92
2b0r_A	202	Possible adenyl cyclase-associated protein; struct	99.91
2yuh_A	179	Tubulin-specific chaperone C; microtubule, beta-tu	99.25
2yuh_A	179	Tubulin-specific chaperone C; microtubule, beta-tu	98.62
3bh7_B	352	Protein XRP2; protein-protein complex, GTPase acti	97.98
3bh7_B	352	Protein XRP2; protein-protein complex, GTPase acti	97.19

>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1

Probab=100.00  E-value=3.2e-42  Score=270.19  Aligned_cols=113  Identities=53%  Similarity=0.893  Sum_probs=108.0

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+||||+|+|++++|+|+.|+||++|+++++.||+++.+|+.|++|+|+||+|+++          
T Consensus        29 ~~qsV~I~~C~~s~I~IkGKvNsIsld~C~k~~vv~ds~VSsvevinc~~~~vQv~g~vPtisIDktdg~----------   98 (157)
T 1k8f_A           29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGC----------   98 (157)
T ss_dssp             TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESCEEE----------
T ss_pred             cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence            7999999999999999999999999999999999999999999999999999999988888888887777          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeCCCCceeeccCcccceee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIV  143 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~~~~d~~e~p~~~~~f~~  143 (147)
                                         ++|||+||++++|++|||++|||++|.++|||+|+|+ ||||.-
T Consensus        99 -------------------~iYLSkesl~~ei~TsKsS~mNv~vp~~d~D~~E~pi-PEQf~t  141 (157)
T 1k8f_A           99 -------------------HAYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPV-PEQFKT  141 (157)
T ss_dssp             -------------------EEECCTTCTTCEEEEESCEEEEEEEEETTTEEEEEEC-CCEEEE
T ss_pred             -------------------EEEEccccCCcEEEEEcccceEEeecCCCCceeEccC-chhEEE
Confidence                               9999999999999999999999999988899999999 999964

>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A

Probab=100.00  E-value=1.1e-41  Score=267.59  Aligned_cols=113  Identities=34%  Similarity=0.526  Sum_probs=107.1

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+||||+|+|++++|+|+.|+||++|+++++.||+++.+|+.|++|+|++|+|+++          
T Consensus        30 ~~qsV~I~~C~~s~I~IkGKvNsItld~C~k~~vv~ds~VSsvevinc~~v~vQv~g~vPtisIDktdg~----------   99 (159)
T 1k4z_A           30 KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDGG----------   99 (159)
T ss_dssp             TTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESCEEE----------
T ss_pred             cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence            7999999999999999999999999999999999999999999999999999999888888887777777          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccceee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAFIV  143 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f~~  143 (147)
                                         ++|||+||++++|+||||++|||++|. ++|||+|+|+ ||||.-
T Consensus       100 -------------------~iYLSkesl~~ei~TSksS~mNv~vp~~~d~D~~E~pi-PEQf~t  143 (159)
T 1k4z_A          100 -------------------NIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYVEFPI-PEQMKH  143 (159)
T ss_dssp             -------------------EEECCSTTTTCEEEEESCEEEEEEESCSGGGCCEEEEC-CCCEEE
T ss_pred             -------------------EEEEChhhcCcEEEEEcccceeEEecCCCCCceeEccC-chhEEE
Confidence                               999999999999999999999999996 6789999999 999964

>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}

Probab=100.00  E-value=6.6e-41  Score=271.27  Aligned_cols=111  Identities=39%  Similarity=0.645  Sum_probs=106.6

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+|+||+|+|+|++|+|+.|+||++|+++++.||+++.+|+.|++|+|+||+|+++          
T Consensus        71 ~~qsV~I~~C~nstI~IkGKvNsItld~C~k~~vv~dsvVSsvEvinc~~v~vQV~G~vPTIsIDKtDg~----------  140 (202)
T 2b0r_A           71 IKNKVSVRCSQNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMTGIVPTISLDKSNKV----------  140 (202)
T ss_dssp             TTCEEEEEEEESCEEEECSCBSEEEEEEEEEEEEEECCBSSEEEEESCEEEEEEESSCCCEEEEESCEEE----------
T ss_pred             cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEccCCE----------
Confidence            7999999999999999999999999999999999999999999999999999999988888888887777          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccce
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAF  141 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f  141 (147)
                                         ++|||+||++++|+||||++|||++|. ++|||+|+|+ ||||
T Consensus       141 -------------------qiYLSkeSl~teIvTSKSSemNV~vP~~~dgD~~E~pI-PEQf  182 (202)
T 2b0r_A          141 -------------------NIYTSKEGKNVEVYSSKSSEMNLLFPGEEEGDWKELAI-PEQF  182 (202)
T ss_dssp             -------------------EEECCGGGTTCEEEEESCEEEEEEEECSSTTCEEEEEC-CCCE
T ss_pred             -------------------EEEEcccccCcEEEEecccceeEeccCCCCCceeEccC-chHh
Confidence                               999999999999999999999999998 7899999999 9999

>1k4z_A CAP, adenylyl cyclase-associated protein; right-handed parallel beta-helix, intertwined dimer; 2.30A {Saccharomyces cerevisiae} SCOP: b.80.5.1 PDB: 1kq5_A

Probab=99.92  E-value=1.8e-25  Score=175.47  Aligned_cols=88  Identities=30%  Similarity=0.356  Sum_probs=81.8

Q ss_pred             ccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCC
Q psy17499         38 SLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESL  108 (147)
Q Consensus        38 ~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~  108 (147)
                      .+-|+|||++|++++|||+||+|+|++|+|+|++|+||+  |++++.       |++|++|||+||||           +
T Consensus        29 ~~~qsV~I~~C~~s~I~IkGKvNsItld~C~k~~vv~ds~VSsvevinc~~v~vQv~g~vPtisIDkt-----------d   97 (159)
T 1k4z_A           29 NKDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKS-----------D   97 (159)
T ss_dssp             CTTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESC-----------E
T ss_pred             ccCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------C
Confidence            466799999999999999999999999999999999999  665554       79999999999999           9


Q ss_pred             ceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499        109 DVEIVSSK-SSEMNVLVPKGNGDYVSNQS  136 (147)
Q Consensus       109 ~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~  136 (147)
                      |++||+|| |.+++|+++++++.|+.+|.
T Consensus        98 g~~iYLSkesl~~ei~TSksS~mNv~vp~  126 (159)
T 1k4z_A           98 GGNIYLSKESLNTEIYTSCSTAINVNLPI  126 (159)
T ss_dssp             EEEEECCSTTTTCEEEEESCEEEEEEESC
T ss_pred             CEEEEEChhhcCcEEEEEcccceeEEecC
Confidence            99999999 89999999999999999876

>1k8f_A CAP, adenylyl cyclase-associated protein; actin bindin structural genomics, PSI, protein structure initiative; 2.80A {Homo sapiens} SCOP: b.80.5.1

Probab=99.92  E-value=1.5e-25  Score=175.77  Aligned_cols=87  Identities=26%  Similarity=0.371  Sum_probs=80.1

Q ss_pred             cccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCCc
Q psy17499         39 LVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESLD  109 (147)
Q Consensus        39 ~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~~  109 (147)
                      +-|+|||++|++++|||+||+|+|++|+|+|++|+||+  |++++.       |++|++|||+||||           +|
T Consensus        29 ~~qsV~I~~C~~s~I~IkGKvNsIsld~C~k~~vv~ds~VSsvevinc~~~~vQv~g~vPtisIDkt-----------dg   97 (157)
T 1k8f_A           29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKT-----------DG   97 (157)
T ss_dssp             TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESC-----------EE
T ss_pred             cCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------CC
Confidence            55699999999999999999999999999999999999  555444       79999999999999           99


Q ss_pred             eEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499        110 VEIVSSK-SSEMNVLVPKGNGDYVSNQS  136 (147)
Q Consensus       110 ~~I~tSK-Ss~~nV~~~~~~~d~~e~p~  136 (147)
                      ++||+|| |.+++|+++++++.|+.+|-
T Consensus        98 ~~iYLSkesl~~ei~TsKsS~mNv~vp~  125 (157)
T 1k8f_A           98 CHAYLSKNSLDCEIVSAKSSEMNVLIPT  125 (157)
T ss_dssp             EEEECCTTCTTCEEEEESCEEEEEEEEE
T ss_pred             EEEEEccccCCcEEEEEcccceEEeecC
Confidence            9999998 88999999999999998873

>2b0r_A Possible adenyl cyclase-associated protein; structural genomics consortium, SGC, unknown function; 2.60A {Cryptosporidium parvum}

Probab=99.91  E-value=6.2e-25  Score=177.90  Aligned_cols=88  Identities=28%  Similarity=0.374  Sum_probs=81.0

Q ss_pred             ccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCC
Q psy17499         38 SLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESL  108 (147)
Q Consensus        38 ~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~  108 (147)
                      .+-|+|||++|++++|+|+||+|+|++|+|+|++|+||+  |++++.       |++|.+|||+||||           +
T Consensus        70 e~~qsV~I~~C~nstI~IkGKvNsItld~C~k~~vv~dsvVSsvEvinc~~v~vQV~G~vPTIsIDKt-----------D  138 (202)
T 2b0r_A           70 SIKNKVSVRCSQNSRIIVEQKVNSIFIENCVGCIFLVNGVISSIEIVNCDDIKLQMTGIVPTISLDKS-----------N  138 (202)
T ss_dssp             CTTCEEEEEEEESCEEEECSCBSEEEEEEEEEEEEEECCBSSEEEEESCEEEEEEESSCCCEEEEESC-----------E
T ss_pred             ccCcEEEEEeccceEEEEcCcEEEEEEecCCcEEEEEeccEEEEEEEecCcEEEEEecccCEEEEEcc-----------C
Confidence            456799999999999999999999999999999999999  555444       79999999999999           9


Q ss_pred             ceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499        109 DVEIVSSK-SSEMNVLVPKGNGDYVSNQS  136 (147)
Q Consensus       109 ~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~  136 (147)
                      |++||+|| |.+++|+++++++.|+.+|.
T Consensus       139 g~qiYLSkeSl~teIvTSKSSemNV~vP~  167 (202)
T 2b0r_A          139 KVNIYTSKEGKNVEVYSSKSSEMNLLFPG  167 (202)
T ss_dssp             EEEEECCGGGTTCEEEEESCEEEEEEEEC
T ss_pred             CEEEEEcccccCcEEEEecccceeEeccC
Confidence            99999998 89999999999999999875

>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-11  Score=96.95  Aligned_cols=72  Identities=18%  Similarity=0.315  Sum_probs=66.7

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL   74 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~   74 (147)
                      ++|.++|++|.+++|.+.|+++++.|++|+++.|++.....+|+|.+|+++++++.  ++.+.+++|.+|.+++
T Consensus        29 ~~~~v~I~~c~~c~I~i~g~~~sl~i~~c~~c~Iv~g~V~gsv~i~~C~~~~i~v~--c~Qlri~~~~~~~~yL  100 (179)
T 2yuh_A           29 HQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVA--CQQLRIHSTKDTRIFL  100 (179)
T ss_dssp             SSCEEEECSCBSCEEEECSCCSCEEEESCBSCEEECCCCSSCEEEESCBSCEEECC--CSEEEEESCBSCEEEC
T ss_pred             cCCeEEEecCcCCEEEEcCCccEEEEecCCCCEEEECCcccEEEEEeCCceEEEEE--cCEEEEeccCCeEEEE
Confidence            46899999999999999999999999999999999999999999999999999995  8899999999885554

>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.62  E-value=1.6e-07  Score=73.59  Aligned_cols=79  Identities=16%  Similarity=0.344  Sum_probs=59.5

Q ss_pred             ccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-----EeeCCcceEEEeccccceeeeCCCCCceEE
Q psy17499         40 VSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-----IVLGKVPTISIDKTDGCQMYLSPESLDVEI  112 (147)
Q Consensus        40 v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-----qV~G~vPtI~IDKtdg~~~yls~es~~~~I  112 (147)
                      -+.++|.+|++++|++.|+++++++++|++|.+++..  +++.+.     ++.=.+|++.|++|+++++||+..+   .-
T Consensus        30 ~~~v~I~~c~~c~I~i~g~~~sl~i~~c~~c~Iv~g~V~gsv~i~~C~~~~i~v~c~Qlri~~~~~~~~yL~~~s---~P  106 (179)
T 2yuh_A           30 QRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTS---RA  106 (179)
T ss_dssp             SCEEEECSCBSCEEEECSCCSCEEEESCBSCEEECCCCSSCEEEESCBSCEEECCCSEEEEESCBSCEEECCCSS---EE
T ss_pred             CCeEEEecCcCCEEEEcCCccEEEEecCCCCEEEECCcccEEEEEeCCceEEEEEcCEEEEeccCCeEEEEeCCC---Cc
Confidence            4689999999999999999999999999999999887  333333     2333599999999999999998643   33


Q ss_pred             EEeeccceE
Q psy17499        113 VSSKSSEMN  121 (147)
Q Consensus       113 ~tSKSs~~n  121 (147)
                      +..-|.++.
T Consensus       107 IIE~c~~i~  115 (179)
T 2yuh_A          107 IVEDCSGIQ  115 (179)
T ss_dssp             EEESCBSEE
T ss_pred             EEEcCCCce
Confidence            334445543

>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A

Probab=97.98  E-value=2.5e-05  Score=67.22  Aligned_cols=73  Identities=15%  Similarity=0.362  Sum_probs=65.0

Q ss_pred             CceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC
Q psy17499          2 NNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP   76 (147)
Q Consensus         2 ~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~   76 (147)
                      .+.+.|.||.+++|.+-|.+.++.|++|.++.|++--.-.+++|.+|+++++.+  ....+.+.+|..|.+++-.
T Consensus        61 g~~v~I~nc~~c~I~l~~~~~sl~I~~c~nC~Iv~GpV~gsv~I~~C~n~~i~v--ac~QlRih~c~n~~~yL~~  133 (352)
T 3bh7_B           61 GQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTL--ACQQFRVRDCRKLEVFLCC  133 (352)
T ss_dssp             TCCEEEESCBSCEEEECSCBSCEEEESCBSCEEEEEEEEEEEEEESCEEEEEEE--EEEEEEEESCEEEEEEEEE
T ss_pred             CCcEEEecCcCCEEEEecCCceEEEecCCCCEEEEccccceEEEEcCCCcEEEE--EcceEEEecccCcEEEEEc
Confidence            367899999999999999999999999999999998888899999999999988  4678999999999777644

>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A

Probab=97.19  E-value=0.0016  Score=56.09  Aligned_cols=70  Identities=11%  Similarity=0.222  Sum_probs=58.5

Q ss_pred             EEEEeecCcEEEE-cCEEc--EEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeec
Q psy17499          5 VYMFNCVNSTVVV-KGKLN--SVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYL   74 (147)
Q Consensus         5 v~i~~c~~~~i~i-~gk~n--sI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~   74 (147)
                      ..+-+-.+.++.. .|+++  .+.|.+|+++.|.+-+.+.++.|.+|.+++|.+----.++.|++|.+|.+++
T Consensus        42 ~~i~~~~~~ti~~~~~~i~g~~v~I~nc~~c~I~l~~~~~sl~I~~c~nC~Iv~GpV~gsv~I~~C~n~~i~v  114 (352)
T 3bh7_B           42 YMFSGLKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTL  114 (352)
T ss_dssp             SEEESCBSCEEEECTTSSTTCCEEEESCBSCEEEECSCBSCEEEESCBSCEEEEEEEEEEEEEESCEEEEEEE
T ss_pred             eEEECccCCEEEECCCcccCCcEEEecCcCCEEEEecCCceEEEecCCCCEEEEccccceEEEEcCCCcEEEE
Confidence            3456666777754 57775  8999999999999999999999999999999875566789999999997775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1k8fa_	157	b.80.5.1 (A:) C-terminal domain of adenylylcyclase	2e-41
d1k4za_	157	b.80.5.1 (A:) C-terminal domain of adenylylcyclase	3e-40

>d1k8fa_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Human (Homo sapiens) [TaxId: 9606]} Length = 157

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (337), Expect = 2e-41
 Identities = 59/132 (44%), Positives = 80/132 (60%), Gaps = 29/132 (21%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
           +  V Y++ CVN+T+ +KGK+NS+ +D+CKK  +VFD +V  VE +N + V++QV+GKVP
Sbjct: 29  LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVP 88

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
           TISI+                             KTDGC  YLS  SLD EIVS+KSSEM
Sbjct: 89  TISIN-----------------------------KTDGCHAYLSKNSLDCEIVSAKSSEM 119

Query: 121 NVLVPKGNGDYV 132
           NVL+P   GD+ 
Sbjct: 120 NVLIPTEGGDFN 131

>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 157

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  130 bits (329), Expect = 3e-40
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 30/133 (22%)

Query: 1   MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVP 60
            +  +++  C    V +KGK+N++ +   +  SVV DS +S ++ +      +QV   +P
Sbjct: 30  KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLP 89

Query: 61  TISIDKTDGCQMYLSPESLDVEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEM 120
            ISID                             K+DG  +YLS ESL+ EI +S S+ +
Sbjct: 90  QISID-----------------------------KSDGGNIYLSKESLNTEIYTSCSTAI 120

Query: 121 NVLVPKG-NGDYV 132
           NV +P G + DYV
Sbjct: 121 NVNLPIGEDDDYV 133

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1k8fa_	157	C-terminal domain of adenylylcyclase associated pr	100.0
d1k4za_	157	C-terminal domain of adenylylcyclase associated pr	100.0
d1k4za_	157	C-terminal domain of adenylylcyclase associated pr	99.92
d1k8fa_	157	C-terminal domain of adenylylcyclase associated pr	99.92

>d1k8fa_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=269.90  Aligned_cols=113  Identities=53%  Similarity=0.893  Sum_probs=107.6

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+||||+|+|+|++|+|+.|+|+++|+++++.||+++.+|+.|++|+|+||+|+++          
T Consensus        29 ~~qsV~I~~C~n~~i~IkgKvNsisid~C~k~~vv~dsvVs~vevvnc~~~~vQv~g~vPtIsIDktdg~----------   98 (157)
T d1k8fa_          29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKTDGC----------   98 (157)
T ss_dssp             TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESCEEE----------
T ss_pred             cccEEEEEcccceEEEEcceEEEEEEeccceeEEEEcceEeEEEEEecCcEEEEEeccCCEEEEEccCCE----------
Confidence            7999999999999999999999999999999999999999999999999999999888887777777777          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeCCCCceeeccCcccceee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPKGNGDYVSNQSVLGAFIV  143 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~~~~d~~e~p~~~~~f~~  143 (147)
                                         ++|||+||++++|+||||++|||++|.++|||.|+|+ ||||.-
T Consensus        99 -------------------~iYLskesl~teI~TskSSemNV~vp~edgD~~E~pi-PEQf~t  141 (157)
T d1k8fa_          99 -------------------HAYLSKNSLDCEIVSAKSSEMNVLIPTEGGDFNEFPV-PEQFKT  141 (157)
T ss_dssp             -------------------EEECCTTCTTCEEEEESCEEEEEEEEETTTEEEEEEC-CCEEEE
T ss_pred             -------------------EEEEcccccCcEEEEeccceeeEecCCCCCCeeEccC-chHeEE
Confidence                               9999999999999999999999999998999999999 999963

>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-41  Score=265.52  Aligned_cols=113  Identities=34%  Similarity=0.526  Sum_probs=106.5

Q ss_pred             CCceEEEEeecCcEEEEcCEEcEEEeeceeeeEEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccCCcce
Q psy17499          1 MNNVVYMFNCVNSTVVVKGKLNSVFMDSCKKSSVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSPESLD   80 (147)
Q Consensus         1 ~~~~v~i~~c~~~~i~i~gk~nsI~i~~C~k~~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~ss~~   80 (147)
                      |+|+||||+|+|++|+||||+|+|++++|+|+.|+|++.|+++++.||+++.+|+.|++|+|+||+|+++          
T Consensus        30 ~~qsV~I~~C~n~~i~IkGKvNsIsid~C~k~~vv~dsvVs~vEvinc~~~~vQV~g~vPtisIDktdg~----------   99 (157)
T d1k4za_          30 KDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKSDGG----------   99 (157)
T ss_dssp             TTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESCEEE----------
T ss_pred             cccEEEEEcccceEEEEccEEEEEEEeccceeEEEEeceEeEEEEEecCcEEEEEeccCCEEEEEccCCE----------
Confidence            7999999999999999999999999999999999999999999999999999999888877777777766          


Q ss_pred             eEEeeCCcceEEEeccccceeeeCCCCCceEEEEeeccceEEEeeC-CCCceeeccCcccceee
Q psy17499         81 VEIVLGKVPTISIDKTDGCQMYLSPESLDVEIVSSKSSEMNVLVPK-GNGDYVSNQSVLGAFIV  143 (147)
Q Consensus        81 v~qV~G~vPtI~IDKtdg~~~yls~es~~~~I~tSKSs~~nV~~~~-~~~d~~e~p~~~~~f~~  143 (147)
                                         ++|||++|++++|+||||++|||++|. ++|||.|+|+ ||||.-
T Consensus       100 -------------------~iYLskesl~~eI~TsksSemNV~vP~~edgD~~E~pi-PEQf~t  143 (157)
T d1k4za_         100 -------------------NIYLSKESLNTEIYTSCSTAINVNLPIGEDDDYVEFPI-PEQMKH  143 (157)
T ss_dssp             -------------------EEECCSTTTTCEEEEESCEEEEEEESCSGGGCCEEEEC-CCCEEE
T ss_pred             -------------------EEEEchhhcCcEEEEeccceeEEeecCCCCCceeeccC-hhHEEE
Confidence                               999999999999999999999999995 5899999999 999974

>d1k4za_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.4e-25  Score=174.05  Aligned_cols=93  Identities=29%  Similarity=0.336  Sum_probs=83.2

Q ss_pred             EEEEcccccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeee
Q psy17499         33 SVVFDSLVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYL  103 (147)
Q Consensus        33 ~vv~~~~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yl  103 (147)
                      .+.=.++-|+|||++|++++|||+||+|||++|+|+|++|+||+  |++++.       |++|++|||+||||       
T Consensus        24 ~~~~~~~~qsV~I~~C~n~~i~IkGKvNsIsid~C~k~~vv~dsvVs~vEvinc~~~~vQV~g~vPtisIDkt-------   96 (157)
T d1k4za_          24 LVIDANKDESIFIGKCSQVLVQIKGKVNAISLSETESCSVVLDSSISGMDVIKSNKFGIQVNHSLPQISIDKS-------   96 (157)
T ss_dssp             EEEECCTTCEEEEEEEEEEEEEEESCBSEEEEEEEEEEEEEESCBSSCEEEEEEESEEEEESSCCSEEEEESC-------
T ss_pred             EEEccccccEEEEEcccceEEEEccEEEEEEEeccceeEEEEeceEeEEEEEecCcEEEEEeccCCEEEEEcc-------
Confidence            33334556699999999999999999999999999999999999  655544       79999999999999       


Q ss_pred             CCCCCceEEEEee-ccceEEEeeCCCCceeeccC
Q psy17499        104 SPESLDVEIVSSK-SSEMNVLVPKGNGDYVSNQS  136 (147)
Q Consensus       104 s~es~~~~I~tSK-Ss~~nV~~~~~~~d~~e~p~  136 (147)
                          +|++||+|| |.+++|+++++++.|+.+|.
T Consensus        97 ----dg~~iYLskesl~~eI~TsksSemNV~vP~  126 (157)
T d1k4za_          97 ----DGGNIYLSKESLNTEIYTSCSTAINVNLPI  126 (157)
T ss_dssp             ----EEEEEECCSTTTTCEEEEESCEEEEEEESC
T ss_pred             ----CCEEEEEchhhcCcEEEEeccceeEEeecC
Confidence                999999999 88999999999999999985

>d1k8fa_ b.80.5.1 (A:) C-terminal domain of adenylylcyclase associated protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: C-terminal domain of adenylylcyclase associated protein
family: C-terminal domain of adenylylcyclase associated protein
domain: C-terminal domain of adenylylcyclase associated protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7e-26  Score=175.72  Aligned_cols=92  Identities=27%  Similarity=0.376  Sum_probs=82.6

Q ss_pred             cccEEEEEeeeeeEEEEeceeceEEEEccCCeeeeccC--CcceeE-------EeeCCcceEEEeccccceeeeCCCCCc
Q psy17499         39 LVSSVEFVNCQSVQMQVLGKVPTISIDKTDGCQMYLSP--ESLDVE-------IVLGKVPTISIDKTDGCQMYLSPESLD  109 (147)
Q Consensus        39 ~v~sV~I~nC~~~~IqVkGKvnsIsidkc~k~~lv~d~--ss~~v~-------qV~G~vPtI~IDKtdg~~~yls~es~~  109 (147)
                      +-|+|||++|++++|||+||+|||++|+|+|++|+||+  |++++.       |++|++|||+||||           +|
T Consensus        29 ~~qsV~I~~C~n~~i~IkgKvNsisid~C~k~~vv~dsvVs~vevvnc~~~~vQv~g~vPtIsIDkt-----------dg   97 (157)
T d1k8fa_          29 LKQVAYIYKCVNTTLQIKGKINSITVDNCKKLGLVFDDVVGIVEIINSKDVKVQVMGKVPTISINKT-----------DG   97 (157)
T ss_dssp             TTCEEEEESCBSCEEEEEEEESEEEEESCEEEEEEEEEESSEEEEESCEEEEEEESSCCSEEEEESC-----------EE
T ss_pred             cccEEEEEcccceEEEEcceEEEEEEeccceeEEEEcceEeEEEEEecCcEEEEEeccCCEEEEEcc-----------CC
Confidence            44599999999999999999999999999999999999  554443       79999999999999           99


Q ss_pred             eEEEEee-ccceEEEeeCCCCceeeccCcccce
Q psy17499        110 VEIVSSK-SSEMNVLVPKGNGDYVSNQSVLGAF  141 (147)
Q Consensus       110 ~~I~tSK-Ss~~nV~~~~~~~d~~e~p~~~~~f  141 (147)
                      ++||+|| |.+++|+++++++.|+.+|-=.+.|
T Consensus        98 ~~iYLskesl~teI~TskSSemNV~vp~edgD~  130 (157)
T d1k8fa_          98 CHAYLSKNSLDCEIVSAKSSEMNVLIPTEGGDF  130 (157)
T ss_dssp             EEEECCTTCTTCEEEEESCEEEEEEEEETTTEE
T ss_pred             EEEEEcccccCcEEEEeccceeeEecCCCCCCe
Confidence            9999999 8899999999999999998534555