Psyllid ID: psy17509

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
Protein Sequence
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYRLVKK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHccccccHHHHccccccccccEEccccccccccEEEEEEHHHHcccccccccccccccccEEEEEEcHEcccccccEEEcc
Coil and Loop (DISEMBL)
MAIIRGIFLFYVIFYSILACLFAICMYVLMStltdeypklqldesiigvnpglgfrpmssdpeAASLIRYKINNTESASMWTKEIDNYlegnllfpdlevyknpqklpgnqvkcdydnpppqgkiceieleknmgpcteafnygftagkpcvfiklnkengyshdyrlvkk
Flexible Loop (DISEMBL)
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLnkengyshdyrlvkk
Low Complexity Region (SEG)
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYRLVKK
Disordered region (IsUnstruct)
**IIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFR*********SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDY******GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY*****
Disordered Region (DISOPRED)
**IIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKC***NPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYR****
Disordered Region (DISEMBL)
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYRLVKK
Disordered Region (DISPRO)
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYRLVKK
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDYRLVKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	171	2.2.26 [Sep-21-2011]
Q24048	323	Sodium/potassium-transpor	no	N/A	0.877	0.464	0.426	7e-31
Q24046	309	Sodium/potassium-transpor	no	N/A	0.836	0.462	0.363	6e-23
P25169	315	Sodium/potassium-transpor	N/A	N/A	0.812	0.441	0.392	1e-21
Q93235	320	Sodium/potassium-transpor	yes	N/A	0.812	0.434	0.287	4e-16
Q9XUY5	317	Probable sodium/potassium	no	N/A	0.818	0.441	0.301	1e-14
A8X4W9	326	Probable sodium/potassium	N/A	N/A	0.859	0.450	0.289	2e-13
P14415	290	Sodium/potassium-transpor	yes	N/A	0.795	0.468	0.279	2e-11
P14231	290	Sodium/potassium-transpor	yes	N/A	0.795	0.468	0.285	2e-11
P13638	290	Sodium/potassium-transpor	yes	N/A	0.795	0.468	0.285	3e-11
Q28030	290	Sodium/potassium-transpor	yes	N/A	0.795	0.468	0.279	4e-11

>sp|Q24048|ATPB2_DROME Sodium/potassium-transporting ATPase subunit beta-2 OS=Drosophila melanogaster GN=nrv2 PE=1 SV=2

 Score =  133 bits (334), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 95/164 (57%), Gaps = 14/164 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSS-DPEAA 65
           I +FYV FY +LA L AICM+    TL    PK  LD S+IG NPGLGFRP+   D   +
Sbjct: 51  IGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNVES 110

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
           +LI YK    E+   WT  +D++         L VYK P   PG   N   CDY+ PPP+
Sbjct: 111 TLIWYKGTQHENYKHWTDSLDDF---------LAVYKVPGLTPGRGQNIYNCDYNQPPPK 161

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
           G++C++++ K   PCT+  NY +    PC+F+KLNK  G+  +Y
Sbjct: 162 GQVCDVDI-KTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEY 204

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.
Drosophila melanogaster (taxid: 7227)

>sp|Q24046|ATPB1_DROME Sodium/potassium-transporting ATPase subunit beta-1 OS=Drosophila melanogaster GN=nrv1 PE=1 SV=2

 Score =  106 bits (265), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 14/157 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           + LFY IFY +LA LF ICM  L+ST++D  PK +L +S+IG NPGLGFRP+S   E  S
Sbjct: 47  LLLFYTIFYIVLAALFTICMQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGS 106

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVK-CDYDNPPPQGKI 125
           +I +       +  W + ID++L            ++     G  +K C +        +
Sbjct: 107 VIAFDGKKPAESDYWIELIDDFL------------RDYNHTEGRDMKHCGFGQVLEPTDV 154

Query: 126 CEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           C +  +   G C++A NYG+   +PC+F+KLNK  G+
Sbjct: 155 CVVNTDL-FGGCSKANNYGYKTNQPCIFLKLNKIFGW 190

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|P25169|AT1B1_ARTSF Sodium/potassium-transporting ATPase subunit beta OS=Artemia franciscana PE=2 SV=1

 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 83/153 (54%), Gaps = 14/153 (9%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEA-- 64
           I +FYVIFY++LA  FA  + +   TL  + PK Q  +S+IG NPGLGFRPM   PEA  
Sbjct: 46  ITIFYVIFYTLLAGFFAGMLMIFYQTLDFKIPKWQNKDSLIGANPGLGFRPMP--PEAQV 103

Query: 65  -ASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQG 123
            ++LI++K         W   +  +LE     P   +  + Q+       CD+D PP +G
Sbjct: 104 DSTLIQFKHGIKGDWQYWVHSLTEFLE-----PYETLTSSGQEF----TNCDFDKPPQEG 154

Query: 124 KICEIELEKNMGPCTEAFNYGFTAGKPCVFIKL 156
           K C   +E     CT+  N+G+  GKPCV IKL
Sbjct: 155 KACNFNVELLGDHCTKENNFGYELGKPCVLIKL 187

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Artemia franciscana (taxid: 6661)

>sp|Q93235|AT1B1_CAEEL Sodium/potassium-transporting ATPase subunit beta-1 OS=Caenorhabditis elegans GN=nkb-1 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 28/167 (16%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I +FY+IFY+ LA  +  C+ + M TL  + P+     +IIGVNPG+G++P   +   ++
Sbjct: 52  IIVFYIIFYAFLAAFWLTCLTIFMKTLDPKVPRFYGKGTIIGVNPGVGYQPWLKERPDST 111

Query: 67  LIRYKINNTESASMWTKEIDNYL-----------EGNLLFPDLEVYKNPQKLPGNQVKCD 115
           LI+Y + + +S   + +++  YL           E      + ++ KNP  LP       
Sbjct: 112 LIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETRECGAGDSNDDLEKNPDALP------- 164

Query: 116 YDNPPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
                     C  +L      C+E  ++G+ +GKPCV I LN+  G+
Sbjct: 165 ----------CRFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGW 201

Non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). May also may function in the peptidic vesicle transport pathway from the endoplasmic reticulum for the defecation behaviors.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9XUY5|AT1B3_CAEEL Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis elegans GN=nkb-3 PE=3 SV=1

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I +FY+IFY  L+  F  C+ + + TL  + P+     +IIGVNPG+G++P   +   ++
Sbjct: 49  ITVFYIIFYIFLSAFFIGCLSIFLRTLDPKVPRFYGKGTIIGVNPGVGYQPWLKENPDST 108

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLP-------GNQVKCDYDNP 119
           LI++ + +++S   + K++DNYL           YKN  +          + ++ D D  
Sbjct: 109 LIKFNLQDSKSWEPYVKQLDNYLSK---------YKNTNETRDCGASDNNDALETDTDTF 159

Query: 120 PPQGKICEIEL---EKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           P     C  +L   EK    C     YG+ +GKPCV + LN+  G+
Sbjct: 160 P-----CRFDLGLFEK--ANCGAKDQYGYKSGKPCVAVSLNRLIGW 198

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis elegans (taxid: 6239)

>sp|A8X4W9|AT1B3_CAEBR Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis briggsae GN=nkb-3 PE=3 SV=3

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 12/159 (7%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I +FY+IFY  L+  F  C+ + + TL  + P+     +IIGVNPG+G++P   +   ++
Sbjct: 58  ITVFYIIFYIFLSAFFIGCLAIFLKTLDPKVPRFYGKGTIIGVNPGVGYQPWLKENPDST 117

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKIC 126
           LI++ + +++S   + K++D Y              N  +  G +   +     P    C
Sbjct: 118 LIKFNLQDSKSWEPYVKQLDGYFS-------RYNNTNDTRECGAEDSNEALQTDPDSLPC 170

Query: 127 EIEL---EKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
             +L   EK    C     YGF +GKPCV + LN+  G+
Sbjct: 171 RFDLGLFEK--ANCGAKDQYGFKSGKPCVVVSLNRLIGW 207

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane. Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis briggsae (taxid: 6238)

>sp|P14415|AT1B2_HUMAN Sodium/potassium-transporting ATPase subunit beta-2 OS=Homo sapiens GN=ATP1B2 PE=1 SV=3

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 25/161 (15%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY++FY  L  +F + M+V++ T++D  PK Q   +     PGL  RP + + +   
Sbjct: 40  ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLAT----PGLMIRPKTENLD--- 92

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQG--- 123
            +   +++TES     ++++ +LE       ++  KN    PG      Y   P  G   
Sbjct: 93  -VIVNVSDTESWDQHVQKLNKFLEP--YNDSIQAQKNDVCRPGR-----YYEQPDNGVLN 144

Query: 124 ---KICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+    + +G C+   ++ +YG++ G+PCVFIK+N+
Sbjct: 145 YPKRACQFNRTQ-LGNCSGIGDSTHYGYSTGQPCVFIKMNR 184

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-2 subunit is not known.

Homo sapiens (taxid: 9606)

>sp|P14231|AT1B2_MOUSE Sodium/potassium-transporting ATPase subunit beta-2 OS=Mus musculus GN=Atp1b2 PE=1 SV=2

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 25/161 (15%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY++FY  L  +F++ M+V++ T++D  PK Q   +     PGL  RP + + +   
Sbjct: 40  ILLFYLVFYGFLTAMFSLTMWVMLQTVSDHTPKYQDRLAT----PGLMIRPKTENLD--- 92

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQG--- 123
            +   I++TES     ++++ +LE       ++  KN    PG      Y   P  G   
Sbjct: 93  -VIVNISDTESWGQHVQKLNKFLEP--YNDSIQAQKNDVCRPGR-----YYEQPDNGVLN 144

Query: 124 ---KICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct: 145 YPKRACQFN-RTQLGDCSGIGDPTHYGYSTGQPCVFIKMNR 184

Seems to mediate cell adhesion of neurons and astrocytes.

Mus musculus (taxid: 10090)

>sp|P13638|AT1B2_RAT Sodium/potassium-transporting ATPase subunit beta-2 OS=Rattus norvegicus GN=Atp1b2 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 25/161 (15%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY++FY  L  +F + M+V++ T++D  PK Q   +     PGL  RP + + +   
Sbjct: 40  ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLAT----PGLMIRPKTENLD--- 92

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQG--- 123
            +   I++TES     ++++ +LE       ++  KN    PG      Y   P  G   
Sbjct: 93  -VIVNISDTESWDQHVQKLNKFLEP--YNDSIQAQKNDVCRPGR-----YYEQPDNGVLN 144

Query: 124 ---KICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct: 145 YPKRACQFN-RTQLGNCSGIGDPTHYGYSTGQPCVFIKMNR 184

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-2 subunit is not known.

Rattus norvegicus (taxid: 10116)

>sp|Q28030|AT1B2_BOVIN Sodium/potassium-transporting ATPase subunit beta-2 OS=Bos taurus GN=ATP1B2 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 25/161 (15%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY++FY  L  +F + M+V++ T++D  PK Q   +     PGL  RP + + +   
Sbjct: 40  ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLAT----PGLMIRPKTENLD--- 92

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQG--- 123
            +   +++TES     ++++ +LE       ++  KN    PG      Y   P  G   
Sbjct: 93  -VIVNVSDTESWDQHVQKLNKFLEP--YNDSIQAQKNDVCRPGR-----YYEQPDNGVLN 144

Query: 124 ---KICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct: 145 YPKRACQFN-RTQLGDCSGIGDPTHYGYSTGQPCVFIKMNR 184

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-2 subunit is not known.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
193654811	323	PREDICTED: sodium/potassium-transporting	0.836	0.442	0.512	2e-36
157361515	320	Na/K ATPase-like protein [Phlebotomus pa	0.830	0.443	0.477	2e-33
312370873	521	hypothetical protein AND_22939 [Anophele	0.888	0.291	0.426	4e-32
242024012	398	sodium/potassium-transporting ATPase sub	0.830	0.356	0.448	1e-31
156547193	327	PREDICTED: sodium/potassium-transporting	0.830	0.434	0.458	3e-31
158297493	323	AGAP007791-PA [Anopheles gambiae str. PE	0.853	0.452	0.418	1e-30
157125254	316	sodium/potassium-dependent atpase beta-2	0.883	0.477	0.408	2e-30
91085085	314	PREDICTED: similar to Sodium/potassium-t	0.871	0.474	0.425	3e-30
312370874	402	hypothetical protein AND_22940 [Anophele	0.853	0.363	0.418	5e-30
125987303	323	GA21652 [Drosophila pseudoobscura pseudo	0.877	0.464	0.439	6e-30

>gi|193654811|ref|XP_001950178.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Acyrthosiphon pisum]

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/156 (51%), Positives = 96/156 (61%), Gaps = 13/156 (8%)

Query: 6   GIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAA 65
           GI LFY +FYS LAC+FAICM VL+STL D  P   L  S+IG NPGLGFRPMS + E  
Sbjct: 52  GILLFYAVFYSSLACMFAICMKVLLSTLNDNTPHFTLSSSLIGTNPGLGFRPMSPNVEDG 111

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLP---GNQVKCDYDNPPPQ 122
           SLI Y  +N  +   WT E+D +         L VYKN   LP    NQ KC Y+ PP +
Sbjct: 112 SLIYYAADNATNVEAWTTELDKF---------LAVYKNKTLLPDKGNNQQKCGYNMPPQK 162

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
            K+CE+ L  NMGPC   + Y +   +PCVFIKLNK
Sbjct: 163 DKVCEVSLA-NMGPCATEYKYQYHKAQPCVFIKLNK 197

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157361515|gb|ABV44715.1| Na/K ATPase-like protein [Phlebotomus papatasi]

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 95/155 (61%), Gaps = 13/155 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY  FY++LA LFAIC+ VL  T+T EYPK QLD S+IG NPG+GFRP+S D    S
Sbjct: 51  ILLFYACFYTVLAALFAICLQVLFYTVTQEYPKWQLDRSLIGTNPGVGFRPISDDDAQGS 110

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQG 123
           LI YK ++ +S   WTK +DN+L           Y N   LPG   NQ  CDYD+PP  G
Sbjct: 111 LIWYKASDEDSIRPWTKLLDNFLAP---------YMNKTLLPGGGKNQEICDYDSPPKPG 161

Query: 124 KICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
           ++C +++    G CT    Y F    PC+F+KLN+
Sbjct: 162 RVCAVDMS-TFGECTSENGYRFNKSSPCIFVKLNR 195

Source: Phlebotomus papatasi

Species: Phlebotomus papatasi

Genus: Phlebotomus

Family: Psychodidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312370873|gb|EFR19181.1| hypothetical protein AND_22939 [Anopheles darlingi]

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 12/164 (7%)

Query: 5   RGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEA 64
           R + LFY IFY++LA LFAICM  L+ +L  E+PK QL+ SIIG +PGL FRPM +D E 
Sbjct: 199 RQLMLFYAIFYTVLAALFAICMQGLLVSLNHEFPKWQLERSIIGSSPGLSFRPMPADVEQ 258

Query: 65  ASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG--NQVKCDYDNPPPQ 122
           A+ I Y   N    ++W   I+ +LE          Y + +KLP    QV CD++ PPP 
Sbjct: 259 AASIEYVAANKSDVAIWVDLINGFLEP---------YVDREKLPAGTEQVICDFNRPPPV 309

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
            K+C  ++ K +G CT   N+G+    PC+F+KLN+   +  DY
Sbjct: 310 RKVCAFDVSK-LGTCTAEQNFGYNRSAPCIFVKLNRIYDWQPDY 352

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024012|ref|XP_002432424.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis] gi|212517857|gb|EEB19686.1| sodium/potassium-transporting ATPase subunit beta-2, putative [Pediculus humanus corporis]

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 96/154 (62%), Gaps = 12/154 (7%)

Query: 6   GIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEA- 64
           GI  FY++F+S LA LFAICMY +M TL+ +YP+ QLDES+IG NPGLG+RP S D E  
Sbjct: 130 GIVTFYLVFFSALAALFAICMYAVMCTLSPDYPRYQLDESLIGTNPGLGYRPYSGDVEKH 189

Query: 65  ASLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGK 124
            SLI Y   N  +   WT  +D +L+  L            +  GN+V CD+D PP +GK
Sbjct: 190 GSLIWYVAANETNVMHWTNVLDVFLQDYL----------ETRQHGNKVICDFDRPPAEGK 239

Query: 125 ICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
           +C + ++ + GPC++   Y +    PC+FIKLN+
Sbjct: 240 VCTVNVD-DFGPCSKEKGYSYNQSSPCIFIKLNR 272

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156547193|ref|XP_001604224.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like isoform 1 [Nasonia vitripennis]

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 93/155 (60%), Gaps = 13/155 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           + +FY++FYS+LA L +ICM  LM+T+ +  PK  LD S+IG NPGLGFRP+S   E  S
Sbjct: 54  VGIFYLLFYSVLAVLCSICMMGLMATIDENRPKWTLDSSLIGTNPGLGFRPISERTEEKS 113

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLP---GNQVKCDYDNPPPQG 123
           LI Y  NN      W   +D +LE          Y N  KLP    NQV CDYD PP  G
Sbjct: 114 LIYYSSNNATQIKEWVNRLDMFLEN---------YLNKSKLPESGRNQVICDYDRPPAPG 164

Query: 124 KICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
           K+C +++  + GPC+   +YGF    PC+FIKLN+
Sbjct: 165 KVCAVDI-NSWGPCSAEQSYGFNNSSPCIFIKLNR 198

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297493|ref|XP_317717.3| AGAP007791-PA [Anopheles gambiae str. PEST] gi|157015222|gb|EAA12801.3| AGAP007791-PA [Anopheles gambiae str. PEST]

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 101/160 (63%), Gaps = 14/160 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPM-SSDPEAA 65
           I +FY++FYS+LA L A+CM+V   TL    PK Q+D+S+IG NPGLGFRP+ S D   +
Sbjct: 51  IGIFYIVFYSVLAALVAVCMWVFFQTLDPRIPKWQMDQSLIGTNPGLGFRPLPSEDNVES 110

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
           +LI YK  + ++  MWT  +D++L+          Y+ P ++ G   N   CDY+ PPP+
Sbjct: 111 TLIWYKGTDEKNYKMWTDALDDFLQD---------YRTPGQVSGRGQNIYNCDYNQPPPK 161

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           G +C++++ K  GPCT   +Y +    PC+F+KLNK  G+
Sbjct: 162 GMVCDVDI-KQYGPCTLENHYNYHKSAPCIFLKLNKIYGW 200

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157125254|ref|XP_001654265.1| sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] gi|108873698|gb|EAT37923.1| AAEL010140-PA [Aedes aegypti]

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 13/164 (7%)

Query: 6   GIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAA 65
            +F+FY +++ IL  LFA CM  L  TL+D+YPK QL +S+IG NPGLGFRPM    +  
Sbjct: 46  ALFVFYSVYFVILFSLFAACMQGLFYTLSDQYPKYQLSDSLIGNNPGLGFRPMPGHVKQG 105

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
           +LI Y  +N      W   I+ +         LE Y++P KLPG   NQ+ C+Y + PP 
Sbjct: 106 ALIYYTASNETQIEPWVTRINEF---------LEPYRDPSKLPGEGKNQIACNYTSRPPP 156

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
           GK+C+++L + MGPC     Y +    PC+F+K+N+  G+  +Y
Sbjct: 157 GKVCKVDLSQ-MGPCNAIDGYSYNKSMPCIFVKMNRIYGWVPEY 199

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91085085|ref|XP_967342.1| PREDICTED: similar to Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1) (Protein nervana 1) [Tribolium castaneum] gi|270009043|gb|EFA05491.1| hypothetical protein TcasGA2_TC015676 [Tribolium castaneum]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/160 (42%), Positives = 102/160 (63%), Gaps = 11/160 (6%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           + +FY IFY  LA LFAICM  L +TL+D+ PK +L+ES+IG +PGLGFRP+S++ +  S
Sbjct: 49  LLVFYSIFYICLAALFAICMKGLTATLSDKEPKWKLEESLIGTSPGLGFRPISNNTQEGS 108

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKIC 126
           LI Y + + ++   W + +D +L+          YK  Q++  N  +CDY+    +G +C
Sbjct: 109 LIWYNLKDVQTTQKWVRLVDQFLQP---------YK-VQQIGKNYQQCDYEIAVKEGHVC 158

Query: 127 EIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
            +E++K  GPCT   NYGF +  PCVF+KLN+  G+  DY
Sbjct: 159 AVEVDK-FGPCTAENNYGFNSTSPCVFLKLNRIFGWVPDY 197

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312370874|gb|EFR19182.1| hypothetical protein AND_22940 [Anopheles darlingi]

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 14/160 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPM-SSDPEAA 65
           I  FY++FYS+LA L A+CM+V   TL    PK Q+D+S+IG NPGLGFRP+ S D   +
Sbjct: 125 IGTFYIVFYSVLAALVAVCMWVFFQTLDPRIPKWQMDQSLIGTNPGLGFRPLPSEDNVES 184

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
           +LI Y+    ++  MWT  +D +LE          Y+ P ++ G   N   CDY+ PPP+
Sbjct: 185 TLIWYQGTEEKNYKMWTDALDKFLED---------YRTPGQVSGRGQNIYNCDYNQPPPK 235

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           G +C++++ K  GPCT   +Y +    PC+F+KLNK  G+
Sbjct: 236 GMVCDVDI-KQYGPCTLENHYNYHKSAPCIFLKLNKIYGW 274

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125987303|ref|XP_001357414.1| GA21652 [Drosophila pseudoobscura pseudoobscura] gi|54645745|gb|EAL34483.1| GA21652 [Drosophila pseudoobscura pseudoobscura]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 14/164 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSS-DPEAA 65
           I +FYV FY +L  L AICM+V   TL    PK  LDESIIG NPGLGFRP+   D   +
Sbjct: 51  IGIFYVAFYGVLGALVAICMWVFFQTLDPRIPKWTLDESIIGTNPGLGFRPLPPVDNVES 110

Query: 66  SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
           +LI YK    E+   WT  +D++         L VYK P   PG   N   CDY+ PPP+
Sbjct: 111 TLIWYKGTQHENYKHWTDSLDDF---------LAVYKVPGLTPGRGQNIYNCDYNQPPPK 161

Query: 123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
           G++C++++ K+  PCT+  NY +    PC+F+KLNK  G+  +Y
Sbjct: 162 GQVCDVDI-KSWTPCTKENNYSYHKSAPCIFLKLNKIYGWIPEY 204

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	171
FB|FBgn0015777	323	nrv2 "nervana 2" [Drosophila m	0.877	0.464	0.426	6.9e-31
FB|FBgn0032946	311	nrv3 "nervana 3" [Drosophila m	0.818	0.450	0.392	5.9e-25
FB|FBgn0015776	309	nrv1 "nervana 1" [Drosophila m	0.836	0.462	0.369	1.1e-23
WB|WBGene00007646	320	nkb-1 [Caenorhabditis elegans	0.906	0.484	0.296	1.3e-16
WB|WBGene00010117	317	nkb-3 [Caenorhabditis elegans	0.865	0.466	0.291	1.1e-15
MGI|MGI:88109	290	Atp1b2 "ATPase, Na+/K+ transpo	0.807	0.475	0.301	2.5e-13
UNIPROTKB|P14415	290	ATP1B2 "Sodium/potassium-trans	0.807	0.475	0.295	3.3e-13
UNIPROTKB|F1ST41	290	ATP1B2 "Uncharacterized protei	0.807	0.475	0.295	3.3e-13
UNIPROTKB|A6QLL5	290	ATP1B2 "Sodium/potassium-trans	0.807	0.475	0.295	4.4e-13
UNIPROTKB|Q28030	290	ATP1B2 "Sodium/potassium-trans	0.807	0.475	0.295	4.4e-13

FB|FBgn0015777 nrv2 "nervana 2" [Drosophila melanogaster (taxid:7227)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 70/164 (42%), Positives = 95/164 (57%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSS-DPEAA 65
             I +FYV FY +LA L AICM+    TL    PK  LD S+IG NPGLGFRP+   D   +
Sbjct:    51 IGIFYVAFYGVLAALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNVES 110

Query:    66 SLIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQ 122
             +LI YK    E+   WT  +D++L          VYK P   PG   N   CDY+ PPP+
Sbjct:   111 TLIWYKGTQHENYKHWTDSLDDFLA---------VYKVPGLTPGRGQNIYNCDYNQPPPK 161

Query:   123 GKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSHDY 166
             G++C++++ K   PCT+  NY +    PC+F+KLNK  G+  +Y
Sbjct:   162 GQVCDVDI-KTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEY 204

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0005918 "septate junction" evidence=IDA

GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

FB|FBgn0032946 nrv3 "nervana 3" [Drosophila melanogaster (taxid:7227)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 60/153 (39%), Positives = 84/153 (54%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY+IFY+ L   FA    V   TL +E PK  LD  +IG NPGLGFRPM  +    S
Sbjct:    45 ILLFYIIFYAALTGFFAAIFTVFYQTLDNEKPKWMLDNGLIGSNPGLGFRPMPPEANVES 104

Query:    67 -LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKI 125
              L+ Y+ +  ++   W  E   +L+    + DLE  K       NQV C +++PP   K+
Sbjct:   105 TLVWYESSKKDNYKYWVDETSRFLKS---YQDLE--KQ------NQVNCSFEHPPQDDKV 153

Query:   126 CEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
             C I+   +  PCT   N+G+   +PC+F+KLNK
Sbjct:   154 CGIDFS-SFSPCTADNNFGYHVARPCIFLKLNK 185

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA;NAS

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

FB|FBgn0015776 nrv1 "nervana 1" [Drosophila melanogaster (taxid:7227)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 58/157 (36%), Positives = 87/157 (55%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             + LFY IFY +LA LF ICM  L+ST++D  PK +L +S+IG NPGLGFRP+S   E  S
Sbjct:    47 LLLFYTIFYIVLAALFTICMQGLLSTISDTEPKWKLQDSLIGTNPGLGFRPLSEQTERGS 106

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVK-CDYDNPPPQGKI 125
             +I +       +  W + ID++L           Y + +   G  +K C +        +
Sbjct:   107 VIAFDGKKPAESDYWIELIDDFLRD---------YNHTE---GRDMKHCGFGQVLEPTDV 154

Query:   126 CEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
             C +  +   G C++A NYG+   +PC+F+KLNK  G+
Sbjct:   155 CVVNTDL-FGGCSKANNYGYKTNQPCIFLKLNKIFGW 190

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS;NAS

GO:0006812 "cation transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0006813 "potassium ion transport" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA;NAS

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00007646 nkb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 206 (77.6 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 48/162 (29%), Positives = 84/162 (51%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I +FY+IFY+ LA  +  C+ + M TL  + P+     +IIGVNPG+G++P   +   ++
Sbjct:    52 IIVFYIIFYAFLAAFWLTCLTIFMKTLDPKVPRFYGKGTIIGVNPGVGYQPWLKERPDST 111

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKIC 126
             LI+Y + + +S   + +++  YL       D    +  +   G+    D +  P     C
Sbjct:   112 LIKYNLRDQKSYKAYLEQMKTYLTKY----DSNATETRECGAGDS-NDDLEKNP-DALPC 165

Query:   127 EIELEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGYSH-DYR 167
               +L      C+E  ++G+ +GKPCV I LN+  G+   DY+
Sbjct:   166 RFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGWRPTDYQ 207

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

WB|WBGene00010117 nkb-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 198 (74.8 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 46/158 (29%), Positives = 82/158 (51%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I +FY+IFY  L+  F  C+ + + TL  + P+     +IIGVNPG+G++P   +   ++
Sbjct:    49 ITVFYIIFYIFLSAFFIGCLSIFLRTLDPKVPRFYGKGTIIGVNPGVGYQPWLKENPDST 108

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQ-VKCDYDNPPPQGKI 125
             LI++ + +++S   + K++DNYL     + +    ++      N  ++ D D  P     
Sbjct:   109 LIKFNLQDSKSWEPYVKQLDNYLSK---YKNTNETRDCGASDNNDALETDTDTFP----- 160

Query:   126 CEIELEK-NMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
             C  +L       C     YG+ +GKPCV + LN+  G+
Sbjct:   161 CRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGW 198

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:88109 Atp1b2 "ATPase, Na+/K+ transporting, beta 2 polypeptide" [Mus musculus (taxid:10090)]

 Score = 176 (67.0 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 48/159 (30%), Positives = 85/159 (53%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY++FY  L  +F++ M+V++ T++D  PK Q D       PGL  RP + + +   
Sbjct:    40 ILLFYLVFYGFLTAMFSLTMWVMLQTVSDHTPKYQ-DRL---ATPGLMIRPKTENLD--- 92

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPD-LEVYKNPQKLPGNQVKCDYDNPP---PQ 122
              +   I++TES     ++++ +LE    + D ++  KN    PG   +   DN     P+
Sbjct:    93 -VIVNISDTESWGQHVQKLNKFLEP---YNDSIQAQKNDVCRPGRYYE-QPDNGVLNYPK 147

Query:   123 GKICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct:   148 -RACQFN-RTQLGDCSGIGDPTHYGYSTGQPCVFIKMNR 184

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

UNIPROTKB|P14415 ATP1B2 "Sodium/potassium-transporting ATPase subunit beta-2" [Homo sapiens (taxid:9606)]

 Score = 175 (66.7 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 47/159 (29%), Positives = 85/159 (53%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY++FY  L  +F + M+V++ T++D  PK Q D       PGL  RP + + +   
Sbjct:    40 ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQ-DRL---ATPGLMIRPKTENLD--- 92

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPD-LEVYKNPQKLPGNQVKCDYDNPP---PQ 122
              +   +++TES     ++++ +LE    + D ++  KN    PG   +   DN     P+
Sbjct:    93 -VIVNVSDTESWDQHVQKLNKFLEP---YNDSIQAQKNDVCRPGRYYE-QPDNGVLNYPK 147

Query:   123 GKICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   ++ +YG++ G+PCVFIK+N+
Sbjct:   148 -RACQFN-RTQLGNCSGIGDSTHYGYSTGQPCVFIKMNR 184

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=TAS

GO:0006810 "transport" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0034220 "ion transmembrane transport" evidence=TAS

GO:0050900 "leukocyte migration" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|F1ST41 ATP1B2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 47/159 (29%), Positives = 85/159 (53%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY++FY  L  +F + M+V++ T++D  PK Q D       PGL  RP + + +   
Sbjct:    40 ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQ-DRL---ATPGLMIRPKTENLD--- 92

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPD-LEVYKNPQKLPGNQVKCDYDNPP---PQ 122
              +   +++TES     ++++ +LE    + D ++  KN    PG   +   DN     P+
Sbjct:    93 -VIVNVSDTESWDQHVQKLNKFLEP---YNDSIQAQKNDVCRPGRYYE-QPDNGVLNYPK 147

Query:   123 GKICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   ++ +YG++ G+PCVFIK+N+
Sbjct:   148 -RACQFN-RTQLGNCSGIGDSTHYGYSTGQPCVFIKMNR 184

GO:0005737 "cytoplasm" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

UNIPROTKB|A6QLL5 ATP1B2 "Sodium/potassium-transporting ATPase subunit beta-2" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 47/159 (29%), Positives = 84/159 (52%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY++FY  L  +F + M+V++ T++D  PK Q D       PGL  RP + + +   
Sbjct:    40 ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQ-DRL---ATPGLMIRPKTENLD--- 92

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPD-LEVYKNPQKLPGNQVKCDYDNPP---PQ 122
              +   +++TES     ++++ +LE    + D ++  KN    PG   +   DN     P+
Sbjct:    93 -VIVNVSDTESWDQHVQKLNKFLEP---YNDSIQAQKNDVCRPGRYYE-QPDNGVLNYPK 147

Query:   123 GKICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct:   148 -RACQFN-RTQLGDCSGIGDPTHYGYSTGQPCVFIKMNR 184

GO:0005737 "cytoplasm" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

UNIPROTKB|Q28030 ATP1B2 "Sodium/potassium-transporting ATPase subunit beta-2" [Bos taurus (taxid:9913)]

 Score = 174 (66.3 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 47/159 (29%), Positives = 84/159 (52%)

Query:     7 IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
             I LFY++FY  L  +F + M+V++ T++D  PK Q D       PGL  RP + + +   
Sbjct:    40 ILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQ-DRL---ATPGLMIRPKTENLD--- 92

Query:    67 LIRYKINNTESASMWTKEIDNYLEGNLLFPD-LEVYKNPQKLPGNQVKCDYDNPP---PQ 122
              +   +++TES     ++++ +LE    + D ++  KN    PG   +   DN     P+
Sbjct:    93 -VIVNVSDTESWDQHVQKLNKFLEP---YNDSIQAQKNDVCRPGRYYE-QPDNGVLNYPK 147

Query:   123 GKICEIELEKNMGPCT---EAFNYGFTAGKPCVFIKLNK 158
              + C+      +G C+   +  +YG++ G+PCVFIK+N+
Sbjct:   148 -RACQFN-RTQLGDCSGIGDPTHYGYSTGQPCVFIKMNR 184

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	171
pfam00287	289	pfam00287, Na_K-ATPase, Sodium / potassium ATPase	8e-24
TIGR01107	289	TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPas	3e-19

>gnl|CDD|215838 pfam00287, Na_K-ATPase, Sodium / potassium ATPase beta chain

 Score = 94.0 bits (234), Expect = 8e-24
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 29/163 (17%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFYV+FY  LA +F + ++V++ TL D  PK Q D      +PGL  RP         
Sbjct: 40  ILLFYVVFYGFLAGIFTLTIWVMLQTLDDYTPKYQ-DR---VASPGLMIRPK---VYKGL 92

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKC---------DYD 117
            I + +++ +S   +   ++ +LE          Y N  K  GN   C          + 
Sbjct: 93  EISFNVSDPKSWQEYVHTLNEFLEP---------Y-NDSKQSGNFENCTPGKYFDQGPFG 142

Query: 118 NPPPQGKICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNK 158
            P  + K C+   E  +G C+      +G++ GKPCV IK+N+
Sbjct: 143 APNGEKKACQFNREW-LGNCSGLNDPTFGYSEGKPCVLIKMNR 184

Length = 289

>gnl|CDD|162204 TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPase beta subunit

 Score = 82.0 bits (203), Expect = 3e-19
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFY++FY  LA +F   + V++ T++D  PK Q D      +PGL  RP     +   
Sbjct: 39  ILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQ-DRV---ASPGLTQRP---KVQKLE 91

Query: 67  LIRYKINNTESASMWTKEIDNYL--------EGNLLF--PDLEVYKNPQKLPGNQVKCDY 116
            I + +++  S   + + +  +L        E   LF   D   Y+             +
Sbjct: 92  -ISFNVSDPSSYEGYVQNLHKFLKPYNDSAQEDKNLFDCGDGAEYEQRG---------PF 141

Query: 117 DNPPPQGKICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNK 158
           + P    K C+ + +  +G C+      +G++ GKPC+ IK+N+
Sbjct: 142 NAPYGTKKACQFKRDW-LGNCSGLNDPTFGYSEGKPCIIIKMNR 184

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients [Transport and binding proteins, Cations and iron carrying compounds]. Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	171
TIGR01107	289	Na_K_ATPase_bet Sodium Potassium ATPase beta subun	100.0
PF00287	289	Na_K-ATPase: Sodium / potassium ATPase beta chain;	100.0
KOG3927|consensus	300		100.0
PF11395	43	DUF2873: Protein of unknown function (DUF2873); In	81.14

>TIGR01107 Na_K_ATPase_bet Sodium Potassium ATPase beta subunit

Probab=100.00  E-value=4.2e-51  Score=351.29  Aligned_cols=146  Identities=27%  Similarity=0.571  Sum_probs=129.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHHH
Q psy17509          2 AIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMW   81 (171)
Q Consensus         2 ~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~y   81 (171)
                      .+|++|+|||+|||+|||+|||+||||||+|||+++|+||++.    ++|||++||..    +.++|+|+++++++|++|
T Consensus        34 ~sW~kIllFYliFY~~La~~F~~~m~v~l~Tl~~~~Pk~q~~~----~~PGL~~rP~~----~~~eI~f~~~~~~s~~~y  105 (289)
T TIGR01107        34 GSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQDRV----ASPGLTQRPKV----QKLEISFNVSDPSSYEGY  105 (289)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcCC----CCCceeeccCC----CceEEEEeCCChHHHHHH
Confidence            4899999999999999999999999999999999999999654    59999999965    447899999999999999


Q ss_pred             HHHHHHHhhhccCCCCccccCCCCCCCCCcCCCCC----CC------CCCCCCceeecccCcccCCCC--CCCCccCCCC
Q psy17509         82 TKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDY----DN------PPPQGKICEIELEKNMGPCTE--AFNYGFTAGK  149 (171)
Q Consensus        82 v~~l~~fL~~~~~~~~~~~Y~~~~~~~~~~~~C~~----~~------~~~~~~~C~F~~~~~lg~Cs~--~~~yGY~~g~  149 (171)
                      +++|++||         ++|++..|..++.++|..    .+      ...++++|+|++++ ||+||+  |++|||++|+
T Consensus       106 v~~l~~FL---------~~Y~~~~q~~~~~~~C~~~~~~~~~~~~~~~~~~~~~C~F~~~~-Lg~Cs~~~D~~fGY~~Gk  175 (289)
T TIGR01107       106 VQNLHKFL---------KPYNDSAQEDKNLFDCGDGAEYEQRGPFNAPYGTKKACQFKRDW-LGNCSGLNDPTFGYSEGK  175 (289)
T ss_pred             HHHHHHHH---------HhhchhhccccccccCCccccccccCCccccccccccceecHHh-ccCCCCCCCCCcCcCCCC
Confidence            99999999         999997664434578942    21      22356899999999 999997  5569999999


Q ss_pred             cEEEEEeccccceecc
Q psy17509        150 PCVFIKLNKENGYSHD  165 (171)
Q Consensus       150 PCV~iKLNrI~gw~P~  165 (171)
                      ||||||||||+||+|+
T Consensus       176 PCI~iKLNrIig~~P~  191 (289)
T TIGR01107       176 PCIIIKMNRIIGFKPK  191 (289)
T ss_pred             CeEEEEeeeeeCcccC
Confidence            9999999999999998

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients.

>PF00287 Na_K-ATPase: Sodium / potassium ATPase beta chain; InterPro: IPR000402 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=2.1e-51  Score=353.39  Aligned_cols=147  Identities=37%  Similarity=0.808  Sum_probs=100.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHHH
Q psy17509          2 AIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMW   81 (171)
Q Consensus         2 ~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~y   81 (171)
                      .+|++|+|||+|||++||+|||+||||||+|||+++|+||++    +++|||++||+++.  ++++|+|+.+++++|++|
T Consensus        35 ~sW~~I~lFYlifY~~La~lfa~~m~v~l~tld~~~Pk~~~~----~~~PGL~~rP~~~~--~s~~I~f~~s~~~s~~~y  108 (289)
T PF00287_consen   35 KSWGKILLFYLIFYAFLAALFAICMWVFLQTLDPDVPKYQDR----GSNPGLGFRPNPDT--ESTLISFNASDPSSYQPY  108 (289)
T ss_dssp             STHHHHHHHHHTTHHHHHHHHHHHHHHHHHTSSSSS-S-STT----S-S--EEESS--TT----SEEEE-TT-SGGGHHH
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHHHHHHHHCCCCCCceecc----cccceeeecCCCCc--CcceEEEECCCchhHHHH
Confidence            589999999999999999999999999999999999999954    57999999999965  789999999999999999


Q ss_pred             HHHHHHHhhhccCCCCccccCCCCCCCCCcCCCCCC---------CCCCCCCceeecccCcccCCCCC--CCCccCCCCc
Q psy17509         82 TKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYD---------NPPPQGKICEIELEKNMGPCTEA--FNYGFTAGKP  150 (171)
Q Consensus        82 v~~l~~fL~~~~~~~~~~~Y~~~~~~~~~~~~C~~~---------~~~~~~~~C~F~~~~~lg~Cs~~--~~yGY~~g~P  150 (171)
                      +++|++||         ++|++.++..  .++|+.+         .+...+++|+|++++ ||+|++.  +.|||++|+|
T Consensus       109 v~~L~~FL---------~~Y~~~~~~~--~~~C~~g~~~~~~~~~~~~~~~~~C~F~~~~-lg~Cs~~~d~~~GY~~g~P  176 (289)
T PF00287_consen  109 VDRLDEFL---------KPYNDSSQKN--NENCDPGQYFEQPDFGSPNPPKKACQFDRSW-LGPCSGENDPTFGYSSGKP  176 (289)
T ss_dssp             HHHHHHHH---------HCC-TTTS-S--EE---S-S----SSSSSSSSS--EE---GGG-STTS----SSS----SSS-
T ss_pred             HHHHHHHH---------HHhccccccc--cccCCCcceeecCccccCCCCCcEeEEechh-hccCCCCCCCCccccCCCc
Confidence            99999999         9999987654  6788743         234678999999999 9999974  4599999999


Q ss_pred             EEEEEeccccceeccc
Q psy17509        151 CVFIKLNKENGYSHDY  166 (171)
Q Consensus       151 CV~iKLNrI~gw~P~~  166 (171)
                      |||||||||+||+|++
T Consensus       177 CI~lKlNri~gw~P~~  192 (289)
T PF00287_consen  177 CIFLKLNRIIGWKPEP  192 (289)
T ss_dssp             EEEEEE---BT---S-
T ss_pred             eEEEEcccccCccccc
Confidence            9999999999999996

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the beta subunit found in the P-type cation exchange ATPases located in the plasma membranes of animal cells. These P-ATPases include both H+/K+-ATPases (3.6.3.10 from EC) and Na+/K+-ATPases (3.6.3.9 from EC), which belong to the IIC subfamily of ATPases [, ]. These ATPases catalyse the hydrolysis of ATP coupled with the exchange of cations, pumping one cation out of the cell (H+ or Na+) in exchange for K+. These ATPases contain an alpha subunit (IPR005775 from INTERPRO) that is the catalytic component, and a glycosylated beta subunit that regulates the number of sodium pumps transported to the plasma membrane through the assembly of alpha/beta heterodimers. The beta subunit has three highly conserved disulphide bonds within the extracellular domain that stabilise the alpha subunit, the alpha/beta interaction, and the catalytic activity of the alpha subunit []. Different beta isoforms exist, permitting greater regulatory control. An example of a H+/K+-ATPase is the gastric pump responsible for acid secretion in the stomach, transporting protons from the cytoplasm of parietal cells to create a large pH gradient in exchange for the internalisation of potassium ions, using ATP hydrolysis to drive the pump []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0005391 sodium:potassium-exchanging ATPase activity, 0006754 ATP biosynthetic process, 0006813 potassium ion transport, 0006814 sodium ion transport, 0016020 membrane; PDB: 2XZB_B 3A3Y_B 3N2F_D 3B8E_D 3KDP_D 3N23_D.

>KOG3927|consensus

Probab=100.00  E-value=3.8e-47  Score=327.62  Aligned_cols=154  Identities=32%  Similarity=0.720  Sum_probs=142.0

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHH
Q psy17509          1 MAIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASM   80 (171)
Q Consensus         1 ~~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~   80 (171)
                      +.+|++|+|||+|||++||+|||+|||+|++|||+++|+|+ ++   +++|||++||.+... ++++|+|+.+++++|++
T Consensus        41 ~~sW~~IllfYivFY~~la~lf~~~~~~~~~tidp~~P~~~-~~---~~~PGl~~~P~~~~~-~~~~i~~~~~~~~~~~~  115 (300)
T KOG3927|consen   41 GSSWAKILLFYIVFYGVLAALFAGCMWFMLQTIDPKVPKYK-DS---GANPGLSFRPNPPRT-DSTLISFNPSDPKSYAN  115 (300)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-cc---CCCCceeecCCCCcC-cceeEEEeCCChhhHHH
Confidence            45899999999999999999999999999999999999999 54   689999999999877 99999999999999999


Q ss_pred             HHHHHHHHhhhccCCCCccccCCCCCCCC---CcCCCCCCCCCCCCCceeecccCcccCCC--CCCCCccCCCCcEEEEE
Q psy17509         81 WTKEIDNYLEGNLLFPDLEVYKNPQKLPG---NQVKCDYDNPPPQGKICEIELEKNMGPCT--EAFNYGFTAGKPCVFIK  155 (171)
Q Consensus        81 yv~~l~~fL~~~~~~~~~~~Y~~~~~~~~---~~~~C~~~~~~~~~~~C~F~~~~~lg~Cs--~~~~yGY~~g~PCV~iK  155 (171)
                      |+++|++||         ++|++.++.+.   +..+|.+.++..+..+|+|+++. |++|+  .+++|||++|+||||||
T Consensus       116 ~~~~i~~fL---------~kY~d~~~~~~~~~~~~~~~~~q~~~~~~~ckfd~~~-f~~cs~~~d~~~Gy~~g~Pci~ik  185 (300)
T KOG3927|consen  116 YVDRIDDFL---------KKYNDNGQEPRMGVNIDNCWFYQPGTPTVACKFDLDG-FGNCSGSNDDNFGYSKGQPCIFLK  185 (300)
T ss_pred             HHHHHHHHH---------HhhCcccccccccccCcccccccCCCCCceEEecHHH-cCcCccccCCCccccCCCceEEEE
Confidence            999999999         99999765442   67778888888888899999999 99995  67889999999999999


Q ss_pred             eccccceecccccC
Q psy17509        156 LNKENGYSHDYRLV  169 (171)
Q Consensus       156 LNrI~gw~P~~y~~  169 (171)
                      ||||+||+|+.|+.
T Consensus       186 lNri~G~~Pe~~~~  199 (300)
T KOG3927|consen  186 LNRILGWKPELYNR  199 (300)
T ss_pred             eeeecCCccccCCC
Confidence            99999999999886

>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins

Probab=81.14  E-value=3.5  Score=25.83  Aligned_cols=26  Identities=31%  Similarity=0.575  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17509          7 IFLFYVIFYSILACLFAICMYVLMST   32 (171)
Q Consensus         7 I~lFYlifY~~La~~Fa~~m~v~~~t   32 (171)
                      ++=||++|-++|..+..+++.+|...
T Consensus         6 l~dfylc~l~~llflv~imliif~f~   31 (43)
T PF11395_consen    6 LFDFYLCFLSFLLFLVIIMLIIFWFS   31 (43)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45699999999988888888777543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	171
3n23_B	277	Crystal Structure Of The High Affinity Complex Betw		3e-10
3kdp_B	286	Crystal Structure Of The Sodium-potassium Pump Leng		6e-10
2zxe_B	305	Crystal Structure Of The Sodium - Potassium Pump In		6e-09
3a3y_B	305	Crystal Structure Of The Sodium-potassium Pump With		6e-09
3ixz_B	290	Pig Gastric H+K+-Atpase Complexed With Aluminium Fl		2e-05

>pdb|3N23|B Chain B, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFYVIFY  LA +F   + V++ T+++  P  Q   +     PGL   P S   E   
Sbjct: 9   ILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDRVA----PPGLTQIPQSQKTE--- 61
Query: 67  LIRYKINNTESASMWTKEIDNYLE--GNLLFPDLEVYKNPQKLPGN-QVKCDYDNPPPQG 123
            I ++ N+ +S   +   I  +LE   +L   D  ++++   +P   + + +Y+N   + 
Sbjct: 62  -ISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGER 120
Query: 124 KICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNKENGYS 163
           K+C   LE  +G C+      YG+  GKPCV IKLN+  G+ 
Sbjct: 121 KVCRFRLEW-LGNCSGLNDETYGYKDGKPCVIIKLNRVLGFK 161

>pdb|3KDP|B Chain B, Crystal Structure Of The Sodium-potassium Pump Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFYVIFY  LA +F   + V++ T+++  P  Q   +     PGL   P S   E   
Sbjct: 18  ILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDRVA----PPGLTQIPQSQKTE--- 70
Query: 67  LIRYKINNTESASMWTKEIDNYLE--GNLLFPDLEVYKNPQKLPGN-QVKCDYDNPPPQG 123
            I ++ N+ +S   +   I  +LE   +L   D  ++++   +P   + + +Y+N   + 
Sbjct: 71  -ISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGER 129
Query: 124 KICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNKENGYS 163
           K+C   LE  +G C+      YG+  GKPCV IKLN+  G+ 
Sbjct: 130 KVCRSRLEW-LGNCSGLNDETYGYKDGKPCVIIKLNRVLGFK 170

>pdb|2ZXE|B Chain B, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 305

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           IFLFY+IFY  LA +F   + VL+ TL+D  PK Q D       PGL   P +   E   
Sbjct: 36  IFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQ-DRV---APPGLSHAPYAIKTE--- 88
Query: 67  LIRYKINNTESASMWTKEIDNYLE--------GNLLFPDLEVYKNPQKLPGNQVK-CDYD 117
            I + I+N +S   + K +   ++        GN  F D          P + +K  D D
Sbjct: 89  -ISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDC------SDTPADYIKRGDLD 141
Query: 118 NPPPQGKICEIE--LEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           +   Q K C       KN     +   YG+  GKPCV  KLN+  G+
Sbjct: 142 DSQGQKKACRFSRMWLKNCSGLDDT-TYGYAEGKPCVVAKLNRIIGF 187

>pdb|3A3Y|B Chain B, Crystal Structure Of The Sodium-potassium Pump With Bound Potassium And Ouabain Length = 305

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           IFLFY+IFY  LA +F   + VL+ TL+D  PK Q D       PGL   P +   E   
Sbjct: 36  IFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQ-DRV---APPGLSHAPYAIKTE--- 88
Query: 67  LIRYKINNTESASMWTKEIDNYLE--------GNLLFPDLEVYKNPQKLPGNQVK-CDYD 117
            I + I+N +S   + K +   ++        GN  F D          P + +K  D D
Sbjct: 89  -ISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDC------SDTPADYIKRGDLD 141
Query: 118 NPPPQGKICEIE--LEKNMGPCTEAFNYGFTAGKPCVFIKLNKENGY 162
           +   Q K C       KN     +   YG+  GKPCV  KLN+  G+
Sbjct: 142 DSQGQKKACRFSRMWLKNCSGLDDT-TYGYAEGKPCVVAKLNRIIGF 187

>pdb|3IXZ|B Chain B, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 22/160 (13%)
Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I L+YV FY +++ +FA+C+YVLM T+    P  Q        +PG+  RP     E   
Sbjct: 40  ISLYYVAFYVVMSGIFALCIYVLMRTIDPYTPDYQDQLK----SPGVTLRPDVYG-EKGL 94
Query: 67  LIRYKINNTESASMWTKEIDNYL--------EGNLLFPDLEVYKNPQKLPGNQVKCDYDN 118
            I Y ++++ + +     +  +L        EG++     + +     L  N  K     
Sbjct: 95  DISYNVSDSTTWAGLAHTLHRFLAGYSPAAQEGSINCTSEKYFFQESFLAPNHTKFS--- 151
Query: 119 PPPQGKICEIELEKNMGPCTEAFNYGFTAGKPCVFIKLNK 158
                K     L+   G     F  GF  GKPC  IK+N+
Sbjct: 152 ----CKFTADMLQNCSGRPDPTF--GFAEGKPCFIIKMNR 185

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	171
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	1e-31
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	3e-31
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	1e-30

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B* Length = 286

 Score =  114 bits (286), Expect = 1e-31
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 14/161 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I LFYVIFY  LA +F   + V++ T+++  P  Q   +     PGL   P S   E   
Sbjct: 18  ILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQDRVA----PPGLTQIPQSQKTE--- 70

Query: 67  LIRYKINNTESASMWTKEIDNYLE--GNLLFPDLEVYKNPQKLPG-NQVKCDYDNPPPQG 123
            I ++ N+ +S   +   I  +LE   +L   D  ++++   +P   + + +Y+N   + 
Sbjct: 71  -ISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGER 129

Query: 124 KICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNKENGY 162
           K+C   LE  +G C+      YG+  GKPCV IKLN+  G+
Sbjct: 130 KVCRSRLE-WLGNCSGLNDETYGYKDGKPCVIIKLNRVLGF 169

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B* Length = 305

 Score =  113 bits (283), Expect = 3e-31
 Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           IFLFY+IFY  LA +F   + VL+ TL+D  PK Q   +     PGL   P +   E   
Sbjct: 36  IFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQDRVA----PPGLSHAPYAIKTE--- 88

Query: 67  LIRYKINNTESASMWTKEIDNYLE--GNLLFPDLEVYKNPQKLPG-NQVKCDYDNPPPQG 123
            I + I+N +S   + K +   ++            +++    P     + D D+   Q 
Sbjct: 89  -ISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDCSDTPADYIKRGDLDDSQGQK 147

Query: 124 KICEIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNKENGY 162
           K C       +  C+  +   YG+  GKPCV  KLN+  G+
Sbjct: 148 KACRFSRM-WLKNCSGLDDTTYGYAEGKPCVVAKLNRIIGF 187

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_B Length = 290

 Score =  111 bits (279), Expect = 1e-30
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 10/158 (6%)

Query: 7   IFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAAS 66
           I L+YV FY +++ +FA+C+YVLM T+    P  Q        +PG+  RP     +   
Sbjct: 40  ISLYYVAFYVVMSGIFALCIYVLMRTIDPYTPDYQDQLK----SPGVTLRPDVYGEK-GL 94

Query: 67  LIRYKINNTESASMWTKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDNPPPQGKIC 126
            I Y ++++ + +     +  +L G    P  +             +  +  P      C
Sbjct: 95  DISYNVSDSTTWAGLAHTLHRFLAGYS--PAAQEGSINCTSEKYFFQESFLAPNHTKFSC 152

Query: 127 EIELEKNMGPCT--EAFNYGFTAGKPCVFIKLNKENGY 162
           +   +  +  C+      +GF  GKPC  IK+N+   +
Sbjct: 153 KFTAD-MLQNCSGRPDPTFGFAEGKPCFIIKMNRIVKF 189

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	171
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	100.0
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	100.0
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	100.0

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B

Probab=100.00  E-value=2.2e-53  Score=364.59  Aligned_cols=150  Identities=26%  Similarity=0.534  Sum_probs=135.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHHH
Q psy17509          2 AIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMW   81 (171)
Q Consensus         2 ~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~y   81 (171)
                      .+|++|+|||||||+|||+|||+||||||+|||+++|+|| ++   +++|||++||++. ++++++|+|+.+|+++|++|
T Consensus        35 ~sW~~IllFYliFY~~LaglFa~~m~v~l~Tld~~~Pkyq-d~---~~~PGL~~~P~~~-~~~~~~I~f~~sd~~s~~~y  109 (290)
T 3ixz_B           35 SRWVWISLYYVAFYVVMSGIFALCIYVLMRTIDPYTPDYQ-DQ---LKSPGVTLRPDVY-GEKGLDISYNVSDSTTWAGL  109 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc-cc---cCCCcceecCCCC-CCcceEEEEeCCCchHHHHH
Confidence            5899999999999999999999999999999999999999 54   3799999999986 46789999999999999999


Q ss_pred             HHHHHHHhhhccCCCCccccCCCCCCCCCcCCCCCCC---------CCCCCCceeecccCcccCCCC--CCCCccCCCCc
Q psy17509         82 TKEIDNYLEGNLLFPDLEVYKNPQKLPGNQVKCDYDN---------PPPQGKICEIELEKNMGPCTE--AFNYGFTAGKP  150 (171)
Q Consensus        82 v~~l~~fL~~~~~~~~~~~Y~~~~~~~~~~~~C~~~~---------~~~~~~~C~F~~~~~lg~Cs~--~~~yGY~~g~P  150 (171)
                      +++|++||         ++|++..|.  +..+|+.++         +++.+++|+|++++ ||+|++  |++|||++|+|
T Consensus       110 v~~l~~FL---------~~Y~~~~q~--~~~~C~~~~~~~q~~~~~~~~~~~~C~F~~~~-lg~Csg~~d~~fGY~~g~P  177 (290)
T 3ixz_B          110 AHTLHRFL---------AGYSPAAQE--GSINCTSEKYFFQESFLAPNHTKFSCKFTADM-LQNCSGRPDPTFGFAEGKP  177 (290)
T ss_pred             HHHHHHHH---------HHhCchhcc--CcccCCCccccccccccCCCCCCceeeccccc-cCcCCCCCCCCCCcCCCCc
Confidence            99999999         999997653  367787653         23456799999999 999996  88999999999


Q ss_pred             EEEEEeccccceeccccc
Q psy17509        151 CVFIKLNKENGYSHDYRL  168 (171)
Q Consensus       151 CV~iKLNrI~gw~P~~y~  168 (171)
                      |||||||||+||+|+.++
T Consensus       178 CI~iKlNrIig~~P~~~~  195 (290)
T 3ixz_B          178 CFIIKMNRIVKFLPGNST  195 (290)
T ss_pred             eEEEEeceEEeeecCCCC
Confidence            999999999999999765

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*

Probab=100.00  E-value=7.7e-54  Score=366.79  Aligned_cols=148  Identities=33%  Similarity=0.578  Sum_probs=134.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHHH
Q psy17509          2 AIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMW   81 (171)
Q Consensus         2 ~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~y   81 (171)
                      .+|++|+|||||||+|||+|||+||||||+|||+++|+|| |++   ++|||++||++.    .++|+|+.+|+++|+.|
T Consensus        13 ~sW~~IllFYliFY~~La~lFa~~m~v~l~TLd~~~Pkyq-d~~---~~PGL~~~P~~~----~~eI~f~~sd~~s~~~y   84 (286)
T 3kdp_B           13 GSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQ-DRV---APPGLTQIPQSQ----KTEISFRPNDPQSYESY   84 (286)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHGGGSCSCSSSCSCC-TTT---CSCCCCBSSCCS----SSEEECCSSCTTTTHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCccc-CCC---CCCcceeccCCC----ceEEEEECCChhhHHHH
Confidence            5899999999999999999999999999999999999999 775   799999999984    47899999999999999


Q ss_pred             HHHHHHHhhhccCCCCccccCCCCCCCCC------------cCCCCCCCCCCCCCceeecccCcccCCC--CCCCCccCC
Q psy17509         82 TKEIDNYLEGNLLFPDLEVYKNPQKLPGN------------QVKCDYDNPPPQGKICEIELEKNMGPCT--EAFNYGFTA  147 (171)
Q Consensus        82 v~~l~~fL~~~~~~~~~~~Y~~~~~~~~~------------~~~C~~~~~~~~~~~C~F~~~~~lg~Cs--~~~~yGY~~  147 (171)
                      +++|++||         ++|++..|...+            ...|+.+++++++++|+|++++ ||+|+  ++++|||++
T Consensus        85 v~~L~~FL---------~~Y~~~~q~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~C~F~~~~-lg~Csg~~d~~fGY~~  154 (286)
T 3kdp_B           85 VVSIVRFL---------EKYKDLAQKDDMIFEDCGNVPSELKERGEYNNERGERKVCRSRLEW-LGNCSGLNDETYGYKD  154 (286)
T ss_dssp             HHHHHHHH---------TTCCTTTSCSTTTEECCCSSCCCCCCCCCSSSSSSSCCEECCCGGG-STTSCCCCSSSCCCCS
T ss_pred             HHHHHHHH---------HHhcchhhcccccccccccCcccceeccccccCCCCCceeEecccc-ccCCCCCCCCCCCcCC
Confidence            99999999         999987653222            3455666667889999999999 99999  899999999


Q ss_pred             CCcEEEEEeccccceecccc
Q psy17509        148 GKPCVFIKLNKENGYSHDYR  167 (171)
Q Consensus       148 g~PCV~iKLNrI~gw~P~~y  167 (171)
                      |+||||||||||+||+|+.|
T Consensus       155 g~PCI~lKlNRIig~~P~~~  174 (286)
T 3kdp_B          155 GKPCVIIKLNRVLGFKPKPP  174 (286)
T ss_dssp             SSCCBCBCCCCCBTCCCCCC
T ss_pred             CCCeEEEEeccccceeeccc
Confidence            99999999999999999986

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*

Probab=100.00  E-value=1.8e-51  Score=354.78  Aligned_cols=150  Identities=31%  Similarity=0.547  Sum_probs=130.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCcccccCCCCCcCCceeEEEecCCchhHHHH
Q psy17509          2 AIIRGIFLFYVIFYSILACLFAICMYVLMSTLTDEYPKLQLDESIIGVNPGLGFRPMSSDPEAASLIRYKINNTESASMW   81 (171)
Q Consensus         2 ~~w~~I~lFYlifY~~La~~Fa~~m~v~~~tl~~~~P~~~~~~s~ig~~PGL~~~P~~~~~~~~~~I~y~~~~~~s~~~y   81 (171)
                      .+|++|+|||+|||+|||+|||+||||||+|||+++|+|| ++  | ++|||++||++    ++++|+|+++++++|++|
T Consensus        31 ~sW~~IllFYliFY~~La~lF~~~m~v~l~tl~~~~Pk~q-~~--i-~~PGL~~~P~~----~~~~I~f~~~~~~s~~~y  102 (305)
T 2zxe_B           31 SSWFKIFLFYLIFYGCLAGIFIGTIQVLLLTLSDFEPKYQ-DR--V-APPGLSHAPYA----IKTEISFSISNPKSYESF  102 (305)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSCSCC-TT--T-CSCCBCCSSCC----SSSEEEECTTCGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccc-cC--C-CCCeeeEecCC----CCeEEEEeCCChhhHHHH
Confidence            5899999999999999999999999999999999999999 44  3 79999999997    469999999999999999


Q ss_pred             HHHHHHHhhhccCCCCccccCCCCCCCC-CcCCCCC-----------CCCCCCCCceeecccCcccCCCC--CCCCccCC
Q psy17509         82 TKEIDNYLEGNLLFPDLEVYKNPQKLPG-NQVKCDY-----------DNPPPQGKICEIELEKNMGPCTE--AFNYGFTA  147 (171)
Q Consensus        82 v~~l~~fL~~~~~~~~~~~Y~~~~~~~~-~~~~C~~-----------~~~~~~~~~C~F~~~~~lg~Cs~--~~~yGY~~  147 (171)
                      +++|++||         ++|+++.|..+ ..++|+.           .+.++++++|+|++++ ||+|++  +++|||++
T Consensus       103 v~~l~~FL---------~~Y~~~~q~~~~~~~~C~~~~~~~~~~g~~~~~~~~~~~C~F~~~~-Lg~Cs~~~d~~fGY~~  172 (305)
T 2zxe_B          103 VKSMHKLM---------DLYNESSQAGNSPFEDCSDTPADYIKRGDLDDSQGQKKACRFSRMW-LKNCSGLDDTTYGYAE  172 (305)
T ss_dssp             HHHHHHHH---------GGGCGGGSCSTTTEECCCSSCCCCCCCSSSCSSSSSCCEECCCGGG-STTC--------CCCS
T ss_pred             HHHHHHHH---------HHhcchhhccccccccCCCcccccccccccccCCCCCceeEeechh-ccCCCCCCCCCCCcCC
Confidence            99999999         99999866432 2889984           3445678999999999 999996  44599999


Q ss_pred             CCcEEEEEeccccceecccccC
Q psy17509        148 GKPCVFIKLNKENGYSHDYRLV  169 (171)
Q Consensus       148 g~PCV~iKLNrI~gw~P~~y~~  169 (171)
                      |+||||||||||+||+|++|++
T Consensus       173 g~PCI~lKlNrI~g~~P~~~~~  194 (305)
T 2zxe_B          173 GKPCVVAKLNRIIGFYPKPLKN  194 (305)
T ss_dssp             SSCCCEEEBCCCBTCCCCCCCT
T ss_pred             CCCeEEEEecceecccccCCcc
Confidence            9999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00