Psyllid ID: psy17622

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
Protein Sequence
AKHSNNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Secondary Structure (PSIPRED)
ccccccHHHHHHccccHHHHcccccccccccEEEEEEccccccccEEEHHHHHHHHHHHHcccccccEEEEEccccccccccccccEEEEcccccccccccccEEEcccccccHHHHHHHHHccEEcccccccEEEEEcccccccEEEEcccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEHHHccccccccccccccccEEEEEEcccccHcHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEccccccEEEcccccccccccEEcHHHHHHHHHccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHcEEEEEEEEccc
Coil and Loop (DISEMBL)
akhsnnwavlvdtsrfwfNYRHVAnakhsnnwavlVDTSRFWFNYRHVANVLSIYRSVkrlgipdshIILMIAddmacnprnprpatvfnnanqhidvygedvevdyrGYEVTVENFIRLLTATSVLTDEGSNILIYLTghggdgflkfqdseevTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Flexible Loop (DISEMBL)
akhsnnwavlvDTSRFWFNYRHVAnakhsnnwaVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRyhevracnryrevtvivtyqrk
Low Complexity Region (SEG)
AKHSNNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Disordered region (IsUnstruct)
*****NWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQD*******ELGDALEQMWQKRRYHEVRACNRYREVTVIVTY***
Disordered Region (DISOPRED)
****NNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQ**
Disordered Region (DISEMBL)
AKHSNNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Disordered Region (DISPRO)
***SNNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AKHSNNWAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRACNRYREVTVIVTYQRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	194	2.2.26 [Sep-21-2011]
Q8T4E1	355	Putative GPI-anchor trans	yes	N/A	0.778	0.425	0.768	8e-72
Q5R6L8	395	GPI-anchor transamidase O	yes	N/A	0.778	0.382	0.718	1e-66
Q92643	395	GPI-anchor transamidase O	yes	N/A	0.778	0.382	0.718	2e-66
Q3MHZ7	395	GPI-anchor transamidase O	yes	N/A	0.778	0.382	0.712	6e-66
Q9CXY9	395	GPI-anchor transamidase O	yes	N/A	0.778	0.382	0.712	4e-65
Q4KRV1	395	GPI-anchor transamidase O	yes	N/A	0.778	0.382	0.706	7e-65
P49018	411	GPI-anchor transamidase O	yes	N/A	0.798	0.377	0.652	7e-61
Q9USP5	380	GPI-anchor transamidase O	yes	N/A	0.788	0.402	0.660	8e-61
P49048	319	Putative GPI-anchor trans	yes	N/A	0.762	0.463	0.613	2e-52
P49047	478	Vacuolar-processing enzym	no	N/A	0.798	0.324	0.335	2e-19

>sp|Q8T4E1|GPI8_DROME Putative GPI-anchor transamidase OS=Drosophila melanogaster GN=CG4406 PE=2 SV=1

 Score =  269 bits (688), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 140/160 (87%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLVD SRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACN RNPRP
Sbjct: 41  STHTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRP 100

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
             V+NNANQHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +L+D GSN+LI
Sbjct: 101 GQVYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSNVLI 160

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           YLTGHGGDGFLKFQDSEE+TSQEL D ++QMW+K+RY+E+
Sbjct: 161 YLTGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNEL 200

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q5R6L8|GPI8_PONAB GPI-anchor transamidase OS=Pongo abelii GN=PIGK PE=2 SV=1

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 138/160 (86%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+P
Sbjct: 40  SGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKP 99

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATVF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILI
Sbjct: 100 ATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILI 159

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           Y+TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct: 160 YMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q92643|GPI8_HUMAN GPI-anchor transamidase OS=Homo sapiens GN=PIGK PE=1 SV=2

 Score =  251 bits (642), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 115/160 (71%), Positives = 138/160 (86%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+P
Sbjct: 40  SGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKP 99

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATVF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILI
Sbjct: 100 ATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILI 159

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           Y+TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct: 160 YMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q3MHZ7|GPI8_BOVIN GPI-anchor transamidase OS=Bos taurus GN=PIGK PE=2 SV=1

 Score =  249 bits (637), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 114/160 (71%), Positives = 138/160 (86%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+P
Sbjct: 40  SGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKP 99

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATV+++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILI
Sbjct: 100 ATVYSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLLSDDRSNILI 159

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           Y+TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct: 160 YMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9CXY9|GPI8_MOUSE GPI-anchor transamidase OS=Mus musculus GN=Pigk PE=2 SV=2

 Score =  247 bits (630), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 114/160 (71%), Positives = 137/160 (85%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACN RNP+P
Sbjct: 40  SGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKP 99

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATVF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILI
Sbjct: 100 ATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILI 159

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           Y+TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct: 160 YMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q4KRV1|GPI8_PIG GPI-anchor transamidase OS=Sus scrofa GN=PIGK PE=2 SV=1

 Score =  246 bits (628), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
           + H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+P
Sbjct: 40  SGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKP 99

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATV+++ N  ++VYG+DVEVDYR Y VTVENF+R+LT         +  +L+D+ SNILI
Sbjct: 100 ATVYSHKNMELNVYGDDVEVDYRSYVVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILI 159

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           Y+TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct: 160 YMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49018|GPI8_YEAST GPI-anchor transamidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI8 PE=1 SV=1

 Score =  233 bits (593), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 107/164 (65%), Positives = 133/164 (81%), Gaps = 9/164 (5%)

Query: 22  HVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPR 81
           H   A ++NNWAVLV TSRFWFNYRH+ANVLS+YR+VKRLGIPDS IILM++DD+ACN R
Sbjct: 29  HEVIATNTNNWAVLVSTSRFWFNYRHMANVLSMYRTVKRLGIPDSQIILMLSDDVACNSR 88

Query: 82  NPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGS 132
           N  P +VFNN +  ID+YG+ VEVDYRGYEVTVENFIRLLT         +  +LTDE S
Sbjct: 89  NLFPGSVFNNKDHAIDLYGDSVEVDYRGYEVTVENFIRLLTDRWTEDHPKSKRLLTDENS 148

Query: 133 NILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           NI IY+TGHGGD FLKFQD+EE+ S+++ DA +QM++K+RY+E+
Sbjct: 149 NIFIYMTGHGGDDFLKFQDAEEIASEDIADAFQQMYEKKRYNEI 192

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9USP5|GPI8_SCHPO GPI-anchor transamidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi8 PE=2 SV=1

 Score =  233 bits (593), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 107/162 (66%), Positives = 134/162 (82%), Gaps = 9/162 (5%)

Query: 24  ANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNP 83
           A + H+NNWAVL+ TSRFWFNYRH ANVL IYRSVKRLGIPDS IILMIADD ACN RN 
Sbjct: 19  AESSHTNNWAVLISTSRFWFNYRHTANVLGIYRSVKRLGIPDSQIILMIADDYACNSRNL 78

Query: 84  RPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNI 134
            P TVF+NA++ +D+YGE++E+DY+GYEVTVE FIRLLT         +  +LT+E SNI
Sbjct: 79  FPGTVFDNADRALDLYGEEIEIDYKGYEVTVEAFIRLLTERVPENTPASKRLLTNERSNI 138

Query: 135 LIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           LIY+TGHGGDGF+KFQD+EE++S++L DA+EQ+ Q +RY+E+
Sbjct: 139 LIYMTGHGGDGFIKFQDAEELSSEDLADAIEQIHQHKRYNEI 180

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49048|GPI8_CAEEL Putative GPI-anchor transamidase OS=Caenorhabditis elegans GN=T05E11.6 PE=1 SV=3

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/158 (61%), Positives = 125/158 (79%), Gaps = 10/158 (6%)

Query: 28  HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
           H+NNWAVLV TS+FWFNYRHV+NVL++Y S+KRLGIPDS+II+M+A+D+ CN RNPRP T
Sbjct: 35  HTNNWAVLVCTSKFWFNYRHVSNVLALYHSIKRLGIPDSNIIMMLAEDVPCNSRNPRPGT 94

Query: 88  VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
           V+  A    ++YG DVEVDYRG EVTVE+FIR+LT         +  +LTD  SN+LIYL
Sbjct: 95  VY-AARAGTNLYGSDVEVDYRGEEVTVESFIRVLTGRHHPATPRSKRLLTDHQSNVLIYL 153

Query: 139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           TGHGGD F+KFQDSEE+T+ +L  A++ M++  RYHE+
Sbjct: 154 TGHGGDSFMKFQDSEELTNVDLAYAIQTMFEDNRYHEM 191

Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P49047|VPEA_ARATH Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 12/167 (7%)

Query: 20  YRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACN 79
           +R   N   S  WAVLV  S  ++NYRH A+V   Y+ +K+ G+ + +I++ + DD+A N
Sbjct: 33  FRPTENDDDSTKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKN 92

Query: 80  PRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLL--------TATSVLTDEG 131
             NPRP  + N+ N   DVY   V  DY G EV V+N + ++          +  + D G
Sbjct: 93  EENPRPGVIINSPNGE-DVY-NGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSG 150

Query: 132 SN--ILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
            N  I IY + HGG G L    S  + + +L D L++ +    Y  +
Sbjct: 151 PNDHIFIYYSDHGGPGVLGMPTSPNLYANDLNDVLKKKYASGTYKSL 197

Asparagine-specific endopeptidase involved in the processing of vacuolar seed protein precursors into the mature forms.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
307185193	899	Putative GPI-anchor transamidase [Campon	0.788	0.170	0.845	8e-80
328776630	884	PREDICTED: hypothetical protein LOC41105	0.840	0.184	0.796	1e-78
380011441	898	PREDICTED: uncharacterized protein LOC10	0.804	0.173	0.818	2e-78
307212364	340	Putative GPI-anchor transamidase [Harpeg	0.860	0.491	0.795	2e-77
270010243	449	hypothetical protein TcasGA2_TC009622 [T	0.871	0.376	0.770	2e-77
322787240	338	hypothetical protein SINV_02094 [Solenop	0.788	0.452	0.845	7e-77
332016537	341	Putative GPI-anchor transamidase [Acromy	0.778	0.442	0.85	2e-76
91086227	338	PREDICTED: similar to gpi-anchor transam	0.768	0.440	0.848	5e-76
383859334	478	PREDICTED: putative GPI-anchor transamid	0.788	0.320	0.833	9e-76
242015748	338	gpi-anchor transamidase, putative [Pedic	0.804	0.461	0.812	1e-75

>gi|307185193|gb|EFN71330.1| Putative GPI-anchor transamidase [Camponotus floridanus]

 Score =  301 bits (771), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 137/162 (84%), Positives = 146/162 (90%), Gaps = 9/162 (5%)

Query: 24  ANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNP 83
           A  +HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNPRNP
Sbjct: 471 AKTEHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNP 530

Query: 84  RPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNI 134
           RPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEGSNI
Sbjct: 531 RPATVFNNIKQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAEETPRSKKLLTDEGSNI 590

Query: 135 LIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           LIYLTGHGG+GFLKFQDSEE+TSQELGDALEQMWQKRRYHE+
Sbjct: 591 LIYLTGHGGNGFLKFQDSEEITSQELGDALEQMWQKRRYHEI 632

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776630|ref|XP_394531.3| PREDICTED: hypothetical protein LOC411058 [Apis mellifera]

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 137/172 (79%), Positives = 147/172 (85%), Gaps = 9/172 (5%)

Query: 14  SRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIA 73
           S  W    + A   HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIA
Sbjct: 447 SYTWEISENFAKTGHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIA 506

Query: 74  DDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------AT 124
           DDMACNPRNPRPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         + 
Sbjct: 507 DDMACNPRNPRPATVFNNIRQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAPETPRSK 566

Query: 125 SVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
            +LTDEGSNILIYLTGHGG+GFLKFQDSEE+TS+EL DALEQMWQKRRYHE+
Sbjct: 567 KLLTDEGSNILIYLTGHGGNGFLKFQDSEEITSKELADALEQMWQKRRYHEI 618

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011441|ref|XP_003689814.1| PREDICTED: uncharacterized protein LOC100867147 [Apis florea]

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 135/165 (81%), Positives = 146/165 (88%), Gaps = 9/165 (5%)

Query: 21  RHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNP 80
           ++ A   HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNP
Sbjct: 468 QNFAKTGHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNP 527

Query: 81  RNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEG 131
           RNPRPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEG
Sbjct: 528 RNPRPATVFNNIRQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAPETPRSKKLLTDEG 587

Query: 132 SNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           SNILIYLTGHGG+GFLKFQDSEE+TS+EL DALEQMWQKRRYHE+
Sbjct: 588 SNILIYLTGHGGNGFLKFQDSEEITSKELADALEQMWQKRRYHEI 632

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212364|gb|EFN88159.1| Putative GPI-anchor transamidase [Harpegnathos saltator]

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/176 (79%), Positives = 151/176 (85%), Gaps = 9/176 (5%)

Query: 10  LVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHII 69
           LV +   W    + A  +HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS II
Sbjct: 15  LVASCHTWEIPENFAKTEHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQII 74

Query: 70  LMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT------- 122
           LMIADDMACNPRNPRPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT       
Sbjct: 75  LMIADDMACNPRNPRPATVFNNIKQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAQEA 134

Query: 123 --ATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             +  +LTDEGSNILIYLTGHGG+GFLKFQDSEE+TSQELGDALEQMWQKRRYHE+
Sbjct: 135 PRSKKLLTDEGSNILIYLTGHGGNGFLKFQDSEEITSQELGDALEQMWQKRRYHEI 190

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270010243|gb|EFA06691.1| hypothetical protein TcasGA2_TC009622 [Tribolium castaneum]

 Score =  293 bits (750), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 138/179 (77%), Positives = 153/179 (85%), Gaps = 10/179 (5%)

Query: 7   WAVLVDTSRFWFNYRHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS 66
            A L  + +F  ++    N  H+NNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS
Sbjct: 12  CASLAHSQKFQLDFEFPKNG-HTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS 70

Query: 67  HIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---- 122
            IILMIADDMACNPRNPRPATVFNNANQHI+VYG+DVEVDYRGYEVTVENF+RLLT    
Sbjct: 71  QIILMIADDMACNPRNPRPATVFNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLP 130

Query: 123 -----ATSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
                +  +LTDEGSN+LIYLTGHGGDGFLKFQDSEE+TSQE+ DALEQMWQK+RYHE+
Sbjct: 131 PGTPRSKQLLTDEGSNVLIYLTGHGGDGFLKFQDSEEITSQEMADALEQMWQKQRYHEI 189

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787240|gb|EFZ13391.1| hypothetical protein SINV_02094 [Solenopsis invicta]

 Score =  291 bits (746), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 137/162 (84%), Positives = 146/162 (90%), Gaps = 9/162 (5%)

Query: 24  ANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNP 83
           A  +HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNPRNP
Sbjct: 27  AKTEHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNP 86

Query: 84  RPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNI 134
           RPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEGSNI
Sbjct: 87  RPATVFNNIKQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAQETPRSKKLLTDEGSNI 146

Query: 135 LIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           LIYLTGHGG+GFLKFQDSEE+TSQELGDALEQMWQKRRYHE+
Sbjct: 147 LIYLTGHGGNGFLKFQDSEEITSQELGDALEQMWQKRRYHEI 188

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016537|gb|EGI57418.1| Putative GPI-anchor transamidase [Acromyrmex echinatior]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/160 (85%), Positives = 145/160 (90%), Gaps = 9/160 (5%)

Query: 26  AKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRP 85
            +HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNPRNPRP
Sbjct: 31  TEHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNPRP 90

Query: 86  ATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILI 136
           ATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEGSNILI
Sbjct: 91  ATVFNNIKQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAQGTPRSKKLLTDEGSNILI 150

Query: 137 YLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           YLTGHGG+GFLKFQDSEE+TSQELGDALEQMWQKRRYHE+
Sbjct: 151 YLTGHGGNGFLKFQDSEEITSQELGDALEQMWQKRRYHEI 190

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086227|ref|XP_972385.1| PREDICTED: similar to gpi-anchor transamidase [Tribolium castaneum]

 Score =  289 bits (739), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 134/158 (84%), Positives = 145/158 (91%), Gaps = 9/158 (5%)

Query: 28  HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
           H+NNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNPRNPRPAT
Sbjct: 29  HTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNPRPAT 88

Query: 88  VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
           VFNNANQHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEGSN+LIYL
Sbjct: 89  VFNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLPPGTPRSKQLLTDEGSNVLIYL 148

Query: 139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           TGHGGDGFLKFQDSEE+TSQE+ DALEQMWQK+RYHE+
Sbjct: 149 TGHGGDGFLKFQDSEEITSQEMADALEQMWQKQRYHEI 186

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859334|ref|XP_003705150.1| PREDICTED: putative GPI-anchor transamidase-like, partial [Megachile rotundata]

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 135/162 (83%), Positives = 144/162 (88%), Gaps = 9/162 (5%)

Query: 24  ANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNP 83
           A   HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNPRNP
Sbjct: 48  AKTGHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNP 107

Query: 84  RPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNI 134
           RPATVFNN  QHI+VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEGSNI
Sbjct: 108 RPATVFNNIKQHINVYGDDVEVDYRGYEVTVENFVRLLTGRLAPETPRSKKLLTDEGSNI 167

Query: 135 LIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           LIYLTGHGG+G LKFQDSEE+TS+ELGDALEQMWQKRRYHE+
Sbjct: 168 LIYLTGHGGNGILKFQDSEEITSKELGDALEQMWQKRRYHEI 209

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015748|ref|XP_002428509.1| gpi-anchor transamidase, putative [Pediculus humanus corporis] gi|212513143|gb|EEB15771.1| gpi-anchor transamidase, putative [Pediculus humanus corporis]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 134/165 (81%), Positives = 147/165 (89%), Gaps = 9/165 (5%)

Query: 21  RHVANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNP 80
           +  + + H+NNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACNP
Sbjct: 20  KEFSESTHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSRIILMIADDMACNP 79

Query: 81  RNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEG 131
           RNPRPATVFNNAN+ ++VYG+DVEVDYRGYEVTVENF+RLLT         +  +LTDEG
Sbjct: 80  RNPRPATVFNNANRRMNVYGDDVEVDYRGYEVTVENFVRLLTGRLPPETPRSKQLLTDEG 139

Query: 132 SNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
           SNILIYLTGHGGDGFLKFQDSEE+TSQEL DALEQMWQKRRYHE+
Sbjct: 140 SNILIYLTGHGGDGFLKFQDSEEITSQELADALEQMWQKRRYHEL 184

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
FB|FBgn0023545	355	CG4406 [Drosophila melanogaste	0.768	0.419	0.778	5.2e-65
UNIPROTKB|F1NI41	393	PIGK "Uncharacterized protein"	0.768	0.379	0.727	4.3e-61
UNIPROTKB|J9P6N1	396	PIGK "Uncharacterized protein"	0.768	0.376	0.727	5.5e-61
UNIPROTKB|A6NEM5	332	PIGK "GPI-anchor transamidase"	0.768	0.448	0.727	5.5e-61
UNIPROTKB|Q92643	395	PIGK "GPI-anchor transamidase"	0.768	0.377	0.727	5.5e-61
UNIPROTKB|Q5R6L8	395	PIGK "GPI-anchor transamidase"	0.768	0.377	0.727	5.5e-61
UNIPROTKB|Q3MHZ7	395	PIGK "GPI-anchor transamidase"	0.768	0.377	0.721	1.2e-60
ZFIN|ZDB-GENE-040625-162	389	pigk "phosphatidylinositol gly	0.768	0.383	0.727	1.2e-60
MGI|MGI:1913863	395	Pigk "phosphatidylinositol gly	0.768	0.377	0.721	3.9e-60
RGD|1306753	395	Pigk "phosphatidylinositol gly	0.768	0.377	0.721	3.9e-60

FB|FBgn0023545 CG4406 [Drosophila melanogaster (taxid:7227)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 123/158 (77%), Positives = 139/158 (87%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLVD SRFWFNYRHVANVLSIYRSVKRLGIPDS IILMIADDMACN RNPRP  
Sbjct:    43 HTNNWAVLVDASRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNARNPRPGQ 102

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATS---------VLTDEGSNILIYL 138
             V+NNANQHI+VYG+DVEVDYRGYEVTVENF+RLLT  +         +L+D GSN+LIYL
Sbjct:   103 VYNNANQHINVYGDDVEVDYRGYEVTVENFVRLLTGRTQNGTARSKKLLSDAGSNVLIYL 162

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGGDGFLKFQDSEE+TSQEL D ++QMW+K+RY+E+
Sbjct:   163 TGHGGDGFLKFQDSEEITSQELADGIQQMWEKKRYNEL 200

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1NI41 PIGK "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    43 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 102

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   103 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIYM 162

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   163 TGHGGNGFLKFQDSEEITNVELADAFEQMWQKRRYNEL 200

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0003923 "GPI-anchor transamidase activity" evidence=IEA

GO:0042765 "GPI-anchor transamidase complex" evidence=IEA

UNIPROTKB|J9P6N1 PIGK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    43 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 102

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   103 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLLSDDRSNILIYM 162

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   163 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 200

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

UNIPROTKB|A6NEM5 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|Q92643 PIGK "GPI-anchor transamidase" [Homo sapiens (taxid:9606)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016255 "attachment of GPI anchor to protein" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0003756 "protein disulfide isomerase activity" evidence=TAS

GO:0034235 "GPI anchor binding" evidence=TAS

GO:0003923 "GPI-anchor transamidase activity" evidence=IMP;TAS

GO:0042765 "GPI-anchor transamidase complex" evidence=IMP

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=NAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006501 "C-terminal protein lipidation" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0006457 "protein folding" evidence=TAS

UNIPROTKB|Q5R6L8 PIGK "GPI-anchor transamidase" [Pongo abelii (taxid:9601)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0042765 "GPI-anchor transamidase complex" evidence=ISS

UNIPROTKB|Q3MHZ7 PIGK "GPI-anchor transamidase" [Bos taurus (taxid:9913)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 114/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACNPRNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             V+++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VYSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIPSSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0042765 "GPI-anchor transamidase complex" evidence=ISS

GO:0003923 "GPI-anchor transamidase activity" evidence=ISS

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

ZFIN|ZDB-GENE-040625-162 pigk "phosphatidylinositol glycan, class K" [Danio rerio (taxid:7955)]

 Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 115/158 (72%), Positives = 137/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACN RNP+PAT
Sbjct:    39 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNYRNPKPAT 98

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYRGYEVTVENF+R+LT         +  +L+D+ SNILIYL
Sbjct:    99 VFSHKNMELNVYGDDVEVDYRGYEVTVENFLRVLTGRLPLSTPRSKRLLSDDRSNILIYL 158

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+++ EL DA EQMWQKRRY+E+
Sbjct:   159 TGHGGNGFLKFQDSEEISNMELADAFEQMWQKRRYNEL 196

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0034394 "protein localization to cell surface" evidence=IMP

GO:0050976 "detection of mechanical stimulus involved in sensory perception of touch" evidence=IMP

MGI|MGI:1913863 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Mus musculus (taxid:10090)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 114/158 (72%), Positives = 136/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACN RNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0003923 "GPI-anchor transamidase activity" evidence=ISO

GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008234 "cysteine-type peptidase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0042765 "GPI-anchor transamidase complex" evidence=ISO

RGD|1306753 Pigk "phosphatidylinositol glycan anchor biosynthesis, class K" [Rattus norvegicus (taxid:10116)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 114/158 (72%), Positives = 136/158 (86%)

Query:    28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPAT 87
             H+NNWAVLV TSRFWFNYRHVAN LS+YRSVKRLGIPDSHI+LM+ADDMACN RNP+PAT
Sbjct:    42 HTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNARNPKPAT 101

Query:    88 VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLT---------ATSVLTDEGSNILIYL 138
             VF++ N  ++VYG+DVEVDYR YEVTVENF+R+LT         +  +L+D+ SNILIY+
Sbjct:   102 VFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRVPPSTPRSKRLLSDDRSNILIYM 161

Query:   139 TGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
             TGHGG+GFLKFQDSEE+T+ EL DA EQMWQKRRY+E+
Sbjct:   162 TGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNEL 199

GO:0003923 "GPI-anchor transamidase activity" evidence=ISO

GO:0042765 "GPI-anchor transamidase complex" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P49048	GPI8_CAEEL	3, ., -, ., -, ., -	0.6139	0.7628	0.4639	yes	N/A
Q9USP5	GPI8_SCHPO	3, ., -, ., -, ., -	0.6604	0.7886	0.4026	yes	N/A
Q9CXY9	GPI8_MOUSE	3, ., -, ., -, ., -	0.7125	0.7783	0.3822	yes	N/A
Q4KRV1	GPI8_PIG	3, ., -, ., -, ., -	0.7062	0.7783	0.3822	yes	N/A
Q5R6L8	GPI8_PONAB	3, ., -, ., -, ., -	0.7187	0.7783	0.3822	yes	N/A
P49018	GPI8_YEAST	3, ., -, ., -, ., -	0.6524	0.7989	0.3771	yes	N/A
Q92643	GPI8_HUMAN	3, ., -, ., -, ., -	0.7187	0.7783	0.3822	yes	N/A
Q3MHZ7	GPI8_BOVIN	3, ., -, ., -, ., -	0.7125	0.7783	0.3822	yes	N/A
Q8T4E1	GPI8_DROME	3, ., -, ., -, ., -	0.7687	0.7783	0.4253	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	194
COG5206	382	COG5206, GPI8, Glycosylphosphatidylinositol transa	1e-75
pfam01650	258	pfam01650, Peptidase_C13, Peptidase C13 family	1e-35

>gnl|CDD|227531 COG5206, GPI8, Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

 Score =  231 bits (591), Expect = 1e-75
 Identities = 104/162 (64%), Positives = 125/162 (77%), Gaps = 9/162 (5%)

Query: 24  ANAKHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNP 83
           A   ++NNWAVL+ TSRFWFNYRH+ANVL  YR VKRLGIPDS IILM  DD ACN RN 
Sbjct: 22  AARTNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIPDSQIILMSYDDQACNSRNL 81

Query: 84  RPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATS---------VLTDEGSNI 134
            P +VFNN+++  D+YGED E+DY GYEVTVE FIRLLTA S         +LTDE SNI
Sbjct: 82  FPGSVFNNSDRAGDLYGEDSEIDYSGYEVTVEVFIRLLTARSGENHPKSKRLLTDESSNI 141

Query: 135 LIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEV 176
            IY+TGHGGD FLKFQD+EE+TS++L DA+ Q+  K+RY+E+
Sbjct: 142 FIYMTGHGGDAFLKFQDAEEMTSEDLADAISQLAAKKRYNEI 183

Length = 382

>gnl|CDD|216627 pfam01650, Peptidase_C13, Peptidase C13 family

 Score =  125 bits (315), Expect = 1e-35
 Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 15/163 (9%)

Query: 31  NWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFN 90
            WAVLV  S  ++NYRH A+V   Y+ +K+ GI D +II+M+ DD+A NP NP P  +FN
Sbjct: 1   LWAVLVAGSNGYYNYRHQADVCHAYQLLKKFGIKDENIIVMMYDDIANNPENPFPGKIFN 60

Query: 91  NANQHIDVYGEDVEVDYRGYEVTVENFIRLLTA-TSVLTDEGS--------NILIYLTGH 141
             N   DVY + V +DY G +VT  NF+ +L    S L   G         N+ IY T H
Sbjct: 61  KPNGT-DVY-KGVPIDYTGNDVTPRNFLAVLLGDKSALKGSGKVLKSGPNDNVFIYFTDH 118

Query: 142 GGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHE----VRACN 180
           G  G L F + + + +++L +AL++M  + +Y +    V AC 
Sbjct: 119 GAPGVLGFPELDYLYAKDLAEALKKMHARGKYKKLVFYVEACE 161

Members of this family are asparaginyl peptidases. The blood fluke parasite Schistosoma mansoni has at least five Clan CA cysteine peptidases in its digestive tract including cathepsins B (2 isoforms), C, F and L. All have been recombinantly expressed as active enzymes, albeit in various stages of activation. In addition, a Clan CD peptidase, termed asparaginyl endopeptidase or 'legumain' has been identified. This has formerly been characterized as a 'haemoglobinase', but this term is probably incorrect. Two cDNAs have been described for Schistosoma mansoni legumain; one encodes an active enzyme whereas the active site cysteine residue encoded by the second cDNA is substituted by an asparagine residue. Both forms have been recombinantly expressed. Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	194
KOG1349|consensus	309		100.0
KOG1348|consensus	477		100.0
PF01650	256	Peptidase_C13: Peptidase C13 family; InterPro: IPR	100.0
COG5206	382	GPI8 Glycosylphosphatidylinositol transamidase (GP	100.0
PF01650	256	Peptidase_C13: Peptidase C13 family; InterPro: IPR	97.96
PF00656	248	Peptidase_C14: Caspase domain; InterPro: IPR011600	97.95
KOG1546|consensus	362		95.93
KOG1349|consensus	309		94.18
COG5206	382	GPI8 Glycosylphosphatidylinositol transamidase (GP	92.73
smart00115	241	CASc Caspase, interleukin-1 beta converting enzyme	90.06
cd00032	243	CASc Caspase, interleukin-1 beta converting enzyme	85.16
PF14538	154	Raptor_N: Raptor N-terminal CASPase like domain	85.07

>KOG1349|consensus

Probab=100.00  E-value=2e-62  Score=423.63  Aligned_cols=152  Identities=77%  Similarity=1.306  Sum_probs=143.8

Q ss_pred             CCCcEEEEEeCCCCCccchhhhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceeec
Q psy17622         28 HSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDY  107 (194)
Q Consensus        28 ~~~~wavlvagS~~w~NYRHqadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~IDY  107 (194)
                      |++|||||||+||+||||||.||++.+|+.+|+.||||+|||+|++||+|||+|||+||++|++.+.+.|+||+++++||
T Consensus        26 htnNwAVLv~tSRfwfNYRH~aNvl~~YrsvKrlGipDsqIilmladd~acn~RN~~pg~Vy~n~~~~~nlygd~vevdy  105 (309)
T KOG1349|consen   26 HTNNWAVLVCTSRFWFNYRHVANVLSVYRSVKRLGIPDSQIILMLADDMACNSRNPRPGTVYNNENHALNLYGDDVEVDY  105 (309)
T ss_pred             ccCceEEEEecchhhhhHHHHHHHHHHHHHHHHcCCCcccEEEEeccccccccCCCCCcceeccccccccccCCcceeec
Confidence            45666666666666699999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCHHHHHHHHcc---------CccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHHHHHHHcCCcceeEE
Q psy17622        108 RGYEVTVENFIRLLTA---------TSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRA  178 (194)
Q Consensus       108 ~g~~Vt~~~fl~vL~G---------k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l~~M~~~~~Y~~lv~  178 (194)
                      +|.+||+|+|+++|||         |+|.+++++|||||+|||||+|||||||.|+|+.+||++++++|+|++||+|++|
T Consensus       106 rgyevtvEnflr~LTgR~~~~tprSKrlltDe~SNIlIYmtGHGgd~FlKFqd~eelts~dLadai~qm~e~~Ryneil~  185 (309)
T KOG1349|consen  106 RGYEVTVENFLRVLTGRHPNNTPRSKRLLTDEGSNILIYLTGHGGDGFLKFQDAEELTSDDLADAIQQMWEKKRYNEILF  185 (309)
T ss_pred             ccchhHHHHHHHHHcCCCCCCCchhhhhcccCCCcEEEEEccCCCccceecccHHHhhhHHHHHHHHHHHHhhhhceEEE
Confidence            9999999999999999         7899999999999999999999999999999999999999999999999999998


Q ss_pred             E
Q psy17622        179 C  179 (194)
Q Consensus       179 ~  179 (194)
                      .
T Consensus       186 m  186 (309)
T KOG1349|consen  186 M  186 (309)
T ss_pred             E
Confidence            4

>KOG1348|consensus

Probab=100.00  E-value=7.4e-60  Score=423.63  Aligned_cols=152  Identities=36%  Similarity=0.667  Sum_probs=147.3

Q ss_pred             CCcEEEEEeCCCCCccchhhhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceeecc
Q psy17622         29 SNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYR  108 (194)
Q Consensus        29 ~~~wavlvagS~~w~NYRHqadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~IDY~  108 (194)
                      +..||||||||+||||||||||+||+||+||++|+|+||||+|||||||.+|.||+||+|+|.|+ +.|||+ ||++||+
T Consensus        44 gt~waVLVAGSngyyNYRHQADvcHAYqiLrkgGikeEnIvv~MYDDIA~~~~NPrpG~iiN~P~-G~DvY~-GvpkDYt  121 (477)
T KOG1348|consen   44 GTRWAVLVAGSNGYYNYRHQADVCHAYQILRKGGIKEENIVVMMYDDIANNEENPRPGVIINRPN-GKDVYQ-GVPKDYT  121 (477)
T ss_pred             ceeEEEEEecCCcccchhhhhhHHHHHHHHHhcCCCchhEEEEEehhhhcCCCCCCCceeecCCC-chhhhc-CCCCccc
Confidence            48999999999999999999999999999999999999999999999999999999999999995 899995 8999999


Q ss_pred             CCCCCHHHHHHHHcc----------CccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHHHHHHHcCCcceeEE
Q psy17622        109 GYEVTVENFIRLLTA----------TSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRA  178 (194)
Q Consensus       109 g~~Vt~~~fl~vL~G----------k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l~~M~~~~~Y~~lv~  178 (194)
                      |++|||+||++||.|          |+++|+|+|+|||||+||||+|.|.||+++.|+++||+++|++||+.++|++|||
T Consensus       122 g~~Vt~~Nf~aVllGd~savkGGsGKV~~SgpnDhiFiYytDHG~pGvl~mP~~~~l~akdlnevL~kmhk~k~Y~~mvf  201 (477)
T KOG1348|consen  122 GEDVTPQNFLAVLLGDASAVKGGSGKVLKSGPNDHIFIYYTDHGGPGVLGMPTSPDLYAKDLNEVLKKMHKSKTYKKMVF  201 (477)
T ss_pred             CCcCCHHHHHHHHhcccccccCCCceeeccCCCceEEEEEecCCCCceEecCCCcchhHHHHHHHHHHHHhccchheEEE
Confidence            999999999999999          8899999999999999999999999999999999999999999999999999997


Q ss_pred             ----Eecc
Q psy17622        179 ----CNRY  182 (194)
Q Consensus       179 ----~~~~  182 (194)
                          |+|-
T Consensus       202 YlEACESG  209 (477)
T KOG1348|consen  202 YLEACESG  209 (477)
T ss_pred             EeeeccCc
Confidence                7763

>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=100.00  E-value=5.2e-57  Score=391.35  Aligned_cols=146  Identities=54%  Similarity=0.974  Sum_probs=141.9

Q ss_pred             cEEEEEeCCCCCccchhhhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceeeccCC
Q psy17622         31 NWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGY  110 (194)
Q Consensus        31 ~wavlvagS~~w~NYRHqadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~IDY~g~  110 (194)
                      +||||||||++|+|||||||+|++||+|+++|+|+||||||++||+||+|+||+||+||++++ +.|+|. +++|||+|.
T Consensus         1 ~wAvlvagS~~~~NYRh~ad~~~~Y~~l~~~G~~~~~Iil~~~dd~a~~~~Np~~g~i~~~~~-~~n~y~-~~~iDY~g~   78 (256)
T PF01650_consen    1 NWAVLVAGSNGWFNYRHQADVCHAYQLLKRNGIPDENIILMMYDDIACNPRNPFPGKIFNDPD-GTNVYK-GVEIDYRGE   78 (256)
T ss_pred             CEEEEEeccCCceeeeEehHHHHHHHHHHHcCCCCceEEEEecCCccchhhCCCCceEEeCCC-cccccC-Ccccccccc
Confidence            699999999999999999999999999999999999999999999999999999999999996 889996 599999999


Q ss_pred             CCCHHHHHHHHcc-------CccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHHHHHHHcCCcceeEE
Q psy17622        111 EVTVENFIRLLTA-------TSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVRA  178 (194)
Q Consensus       111 ~Vt~~~fl~vL~G-------k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l~~M~~~~~Y~~lv~  178 (194)
                      +||+++|++||+|       |+|.|+++|+|||||+||||+|+|+||+.+.|+++||+++|++|++++||+|||+
T Consensus        79 ~v~~~~fl~vL~G~~~~~~~kvl~s~~~D~vfiy~~~HG~~~~l~~~~~~~l~~~~L~~~L~~m~~~~~y~~lv~  153 (256)
T PF01650_consen   79 DVTPENFLNVLTGDKSVPSGKVLNSTENDNVFIYFTGHGGPGFLKFPDGEELTADDLADALDKMHEKKRYKKLVF  153 (256)
T ss_pred             ccCHHHHHHHhcCCCCCCccccccCCCCCeEEEEEeccCCCCcccCCCcccccHHHHHHHHHHHHhhCCcceEEE
Confidence            9999999999998       5789999999999999999999999998899999999999999999999999997

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C13 (legumain family, clan CD). A type example is legumain from Canavalia ensiformis (Jack bean, Horse bean). The blood fluke parasite Schistosoma mansoni has two cysteine proteases in its digestive tract, one a cathepsin B-like protease, the other termed hemoglobinase [, ]. The latter has been hard to purify, free of cathepsin B, and expressed forms in Escherichia coli prove to be inactive, suggesting that hemoglobinase may act in association with cathepsin B [, ]. Plant vacuolar processing enzyme and legumain from legumes [] have been shown to have sequence and functional similarity to hemoglobinase. The catalytic residues of the family are currently unknown, but sequence alignments reveal one totally conserved cysteine and two totally conserved histidines.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis

>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.5e-52  Score=363.05  Aligned_cols=153  Identities=67%  Similarity=1.088  Sum_probs=147.1

Q ss_pred             cCCCcEEEEEeCCCCCccchhhhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceee
Q psy17622         27 KHSNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVD  106 (194)
Q Consensus        27 ~~~~~wavlvagS~~w~NYRHqadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~ID  106 (194)
                      .+++|||||+++||+||||||.|||+.+|..+|+.|+||++||+|.+||.|||.||-+||.+|++.+...++|+++++||
T Consensus        25 t~tnNwAvLlstSRfwfNYRHmANVl~~Yr~vkrlGipDsQIilm~~dd~acnsRnlfpgsvf~N~Dra~dlyge~~eid  104 (382)
T COG5206          25 TNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIPDSQIILMSYDDQACNSRNLFPGSVFNNSDRAGDLYGEDSEID  104 (382)
T ss_pred             ccCCceEEEEecccceeehhhhhhHHHHHHHHHHcCCCcceEEEEechhhhhhhcccCCcccccCcccccceeCcccccc
Confidence            56788888888888889999999999999999999999999999999999999999999999999888899999999999


Q ss_pred             ccCCCCCHHHHHHHHcc---------CccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHHHHHHHcCCcceeE
Q psy17622        107 YRGYEVTVENFIRLLTA---------TSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALEQMWQKRRYHEVR  177 (194)
Q Consensus       107 Y~g~~Vt~~~fl~vL~G---------k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l~~M~~~~~Y~~lv  177 (194)
                      |+|.+||+|+|.+.|+.         |++.+++++||||||+||||++||||||-++++++||++++++|+++|||+|++
T Consensus       105 Y~gyevTve~firLLt~r~~en~p~sKrlltdE~SNIfIYmtGHGgd~FlKFqdaeemtseDladai~ql~~~kRyNeIl  184 (382)
T COG5206         105 YSGYEVTVEVFIRLLTARSGENHPKSKRLLTDESSNIFIYMTGHGGDAFLKFQDAEEMTSEDLADAISQLAAKKRYNEIL  184 (382)
T ss_pred             cccccchHHHHHHHHHhhccCCChhhhhhcccccCcEEEEEccCCCccceecccHHHhhhHHHHHHHHHHHHhhhhceEE
Confidence            99999999999999997         789999999999999999999999999999999999999999999999999999


Q ss_pred             EE
Q psy17622        178 AC  179 (194)
Q Consensus       178 ~~  179 (194)
                      |+
T Consensus       185 fm  186 (382)
T COG5206         185 FM  186 (382)
T ss_pred             EE
Confidence            84

>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.96  E-value=4.2e-06  Score=73.12  Aligned_cols=114  Identities=25%  Similarity=0.386  Sum_probs=72.6

Q ss_pred             ceEEEEecCcccchhhhhccc----------cCCCcEEEEEeCCC-------CC----ccchhhhhhhhH-HHHHHhcCC
Q psy17622          6 NWAVLVDTSRFWFNYRHVANA----------KHSNNWAVLVDTSR-------FW----FNYRHVANVLSI-YRSVKRLGI   63 (194)
Q Consensus         6 nw~vlv~~s~~w~n~r~~~~~----------~~~~~wavlvagS~-------~w----~NYRHqadv~~~-Y~~L~~~Gi   63 (194)
                      ||||||.+|++|+||||-+++          +..+.-.|++..-.       -+    +|-....|+... --..+...+
T Consensus         1 ~wAvlvagS~~~~NYRh~ad~~~~Y~~l~~~G~~~~~Iil~~~dd~a~~~~Np~~g~i~~~~~~~n~y~~~~iDY~g~~v   80 (256)
T PF01650_consen    1 NWAVLVAGSNGWFNYRHQADVCHAYQLLKRNGIPDENIILMMYDDIACNPRNPFPGKIFNDPDGTNVYKGVEIDYRGEDV   80 (256)
T ss_pred             CEEEEEeccCCceeeeEehHHHHHHHHHHHcCCCCceEEEEecCCccchhhCCCCceEEeCCCcccccCCcccccccccc
Confidence            899999999999999999995          34444444433221       11    111112222221 001246678


Q ss_pred             CCCcEEEEecCCCCCCCCCCCCCeeecCCCcccccc----CCCceeecc-CCCCCHHHHHHHHcc
Q psy17622         64 PDSHIILMIADDMACNPRNPRPATVFNNANQHIDVY----GEDVEVDYR-GYEVTVENFIRLLTA  123 (194)
Q Consensus        64 ~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY----~~~v~IDY~-g~~Vt~~~fl~vL~G  123 (194)
                      .+++++-+|..+.. -   |.+.++-.+++..+.+|    |+.-.+.+. ++.++++.|.+.|.-
T Consensus        81 ~~~~fl~vL~G~~~-~---~~~kvl~s~~~D~vfiy~~~HG~~~~l~~~~~~~l~~~~L~~~L~~  141 (256)
T PF01650_consen   81 TPENFLNVLTGDKS-V---PSGKVLNSTENDNVFIYFTGHGGPGFLKFPDGEELTADDLADALDK  141 (256)
T ss_pred             CHHHHHHHhcCCCC-C---CccccccCCCCCeEEEEEeccCCCCcccCCCcccccHHHHHHHHHH
Confidence            99999888888875 2   55555555555555566    333357776 899999999999876

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C13 (legumain family, clan CD). A type example is legumain from Canavalia ensiformis (Jack bean, Horse bean). The blood fluke parasite Schistosoma mansoni has two cysteine proteases in its digestive tract, one a cathepsin B-like protease, the other termed hemoglobinase [, ]. The latter has been hard to purify, free of cathepsin B, and expressed forms in Escherichia coli prove to be inactive, suggesting that hemoglobinase may act in association with cathepsin B [, ]. Plant vacuolar processing enzyme and legumain from legumes [] have been shown to have sequence and functional similarity to hemoglobinase. The catalytic residues of the family are currently unknown, but sequence alignments reveal one totally conserved cysteine and two totally conserved histidines.; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.95  E-value=7e-06  Score=68.09  Aligned_cols=84  Identities=23%  Similarity=0.354  Sum_probs=58.0

Q ss_pred             hhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceeeccCCCCCHHHHHHHHccCccc
Q psy17622         48 VANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVL  127 (194)
Q Consensus        48 qadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~IDY~g~~Vt~~~fl~vL~Gk~l~  127 (194)
                      ..|+-.+.+.|++.|++.++| ++  ++                                    +|.+++++.|+--.-.
T Consensus        21 ~~D~~~~~~~L~~~gf~~~~~-l~--~~------------------------------------~t~~~i~~~l~~l~~~   61 (248)
T PF00656_consen   21 VNDAEAMAEALEKLGFDVENI-LI--DN------------------------------------ATRANILKALRELLQR   61 (248)
T ss_dssp             HHHHHHHHHHHHHTTEEEEEE-EE--ES------------------------------------SSHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHcCCceeec-cc--cc------------------------------------hHHHHHHHHHhhhhcc
Confidence            468899999999999999998 32  22                                    7888888888652222


Q ss_pred             cCCCccEEEEEeCCCCC------ceeecCCCCccCHHH---HHHHHHHHHHc
Q psy17622        128 TDEGSNILIYLTGHGGD------GFLKFQDSEEVTSQE---LGDALEQMWQK  170 (194)
Q Consensus       128 s~~~dnVfvY~tgHGg~------g~i~f~d~~~l~~~d---L~~~l~~M~~~  170 (194)
                      ..++|-++|||+|||..      +.+.-.|+..+..+.   +.+.|..+..+
T Consensus        62 ~~~~D~~~~yfsGHG~~~~~~~~~~~~~~d~~~~~~d~~~~~~~~l~~~~~~  113 (248)
T PF00656_consen   62 AQPGDSVVFYFSGHGIQVDGEGGDEDSGYDGYLLPLDANLILDDELRDLLCK  113 (248)
T ss_dssp             GGTCSEEEEEEESEEETETTCCSTEEEETSSEEEEHHHHEEHHHHTSTTTTG
T ss_pred             CCCCCeeEEEEeccccccCCccCcccccccceeeecchhhhHHHHHhhhhhh
Confidence            34889999999999954      222222432344444   67777777665

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of sequences represent the p20 (20kDa) and p10 (10kDa) subunits of caspases, which together form the catalytic domain of the caspase and are derived from the p45 (45 kDa) precursor (IPR002398 from INTERPRO) []. Caspases (Cysteine-dependent ASPartyl-specific proteASE) are cysteine peptidases that belong to the MEROPS peptidase family C14 (caspase family, clan CD) based on the architecture of their catalytic dyad or triad []. Caspases are tightly regulated proteins that require zymogen activation to become active, and once active can be regulated by caspase inhibitors. Activated caspases act as cysteine proteases, using the sulphydryl group of a cysteine side chain for catalysing peptide bond cleavage at aspartyl residues in their substrates. The catalytic cysteine and histidine residues are on the p20 subunit after cleavage of the p45 precursor. Caspases are mainly involved in mediating cell death (apoptosis) [, , ]. They have two main roles within the apoptosis cascade: as initiators that trigger the cell death process, and as effectors of the process itself. Caspase-mediated apoptosis follows two main pathways, one extrinsic and the other intrinsic or mitochondrial-mediated. The extrinsic pathway involves the stimulation of various TNF (tumour necrosis factor) cell surface receptors on cells targeted to die by various TNF cytokines that are produced by cells such as cytotoxic T cells. The activated receptor transmits the signal to the cytoplasm by recruiting FADD, which forms a death-inducing signalling complex (DISC) with caspase-8. The subsequent activation of caspase-8 initiates the apoptosis cascade involving caspases 3, 4, 6, 7, 9 and 10. The intrinsic pathway arises from signals that originate within the cell as a consequence of cellular stress or DNA damage. The stimulation or inhibition of different Bcl-2 family receptors results in the leakage of cytochrome c from the mitochondria, and the formation of an apoptosome composed of cytochrome c, Apaf1 and caspase-9. The subsequent activation of caspase-9 initiates the apoptosis cascade involving caspases 3 and 7, among others. At the end of the cascade, caspases act on a variety of signal transduction proteins, cytoskeletal and nuclear proteins, chromatin-modifying proteins, DNA repair proteins and endonucleases that destroy the cell by disintegrating its contents, including its DNA. The different caspases have different domain architectures depending upon where they fit into the apoptosis cascades, however they all carry the catalytic p10 and p20 subunits. Caspases can have roles other than in apoptosis, such as caspase-1 (interleukin-1 beta convertase) (3.4.22.36 from EC), which is involved in the inflammatory process. The activation of apoptosis can sometimes lead to caspase-1 activation, providing a link between apoptosis and inflammation, such as during the targeting of infected cells. Caspases may also be involved in cell differentiation [].; GO: 0004197 cysteine-type endopeptidase activity, 0006508 proteolysis; PDB: 1M72_C 2NN3_C 3V4L_A 3IBF_B 2QLF_D 2QLB_C 3IBC_B 2QL9_A 3R5K_B 3H1P_A ....

>KOG1546|consensus

Probab=95.93  E-value=0.031  Score=51.08  Aligned_cols=80  Identities=25%  Similarity=0.433  Sum_probs=56.8

Q ss_pred             CCCcEEEEEeCCCCCccchhh--------hhhhhHHHHH-HhcCCCCCcEEEEecCCCCCCC-CCCCCCeeecCCCcccc
Q psy17622         28 HSNNWAVLVDTSRFWFNYRHV--------ANVLSIYRSV-KRLGIPDSHIILMIADDMACNP-RNPRPATVFNNANQHID   97 (194)
Q Consensus        28 ~~~~wavlvagS~~w~NYRHq--------adv~~~Y~~L-~~~Gi~denIIlm~~DD~a~~p-~Np~pG~i~~~~~~~~n   97 (194)
                      +..+-|||+.     -||.-+        .||-+|.+.| .++|++.|+|++| .|+-+ +| +-               
T Consensus        61 ~gkrrAvLiG-----INY~gTk~ELrGCINDv~~M~~~Lv~rfGFs~ddI~~L-tDt~~-s~~~~---------------  118 (362)
T KOG1546|consen   61 AGKRRAVLIG-----INYPGTKNELRGCINDVHRMRKLLVERFGFSEDDILML-TDTDE-SPVRI---------------  118 (362)
T ss_pred             cccceEEEEe-----ecCCCcHHHHhhhHHHHHHHHHHHHHhhCCChhheEEE-ecCCC-ccccc---------------
Confidence            3456788886     455554        3788899887 6999999998654 44432 12 11               


Q ss_pred             ccCCCceeeccCCCCCHHHHHHHHccCccccCCCccEEEEEeCCCC
Q psy17622         98 VYGEDVEVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGG  143 (194)
Q Consensus        98 lY~~~v~IDY~g~~Vt~~~fl~vL~Gk~l~s~~~dnVfvY~tgHGg  143 (194)
                                    -|.+|+++.|+-.+....++|-+|+=|||||+
T Consensus       119 --------------PT~~Nir~Al~wLV~~aq~gD~LvfHYSGHGt  150 (362)
T KOG1546|consen  119 --------------PTGKNIRRALRWLVESAQPGDSLVFHYSGHGT  150 (362)
T ss_pred             --------------CcHHHHHHHHHHHHhcCCCCCEEEEEecCCCC
Confidence                          24467778886555566788999999999998

>KOG1349|consensus

Probab=94.18  E-value=0.01  Score=52.76  Aligned_cols=119  Identities=29%  Similarity=0.529  Sum_probs=94.1

Q ss_pred             CccceEEEEecCcccchhhhhccc----------cCCCcEEEEEeC------CCC------Cccchhhhhhhh--HHHHH
Q psy17622          3 HSNNWAVLVDTSRFWFNYRHVANA----------KHSNNWAVLVDT------SRF------WFNYRHVANVLS--IYRSV   58 (194)
Q Consensus         3 ~~~nw~vlv~~s~~w~n~r~~~~~----------~~~~~wavlvag------S~~------w~NYRHqadv~~--~Y~~L   58 (194)
                      ||||||||||||||||||||++|.          |+.+...||+..      ||.      |-|-.|.-|+..  ++-..
T Consensus        26 htnNwAVLv~tSRfwfNYRH~aNvl~~YrsvKrlGipDsqIilmladd~acn~RN~~pg~Vy~n~~~~~nlygd~vevdy  105 (309)
T KOG1349|consen   26 HTNNWAVLVCTSRFWFNYRHVANVLSVYRSVKRLGIPDSQIILMLADDMACNSRNPRPGTVYNNENHALNLYGDDVEVDY  105 (309)
T ss_pred             ccCceEEEEecchhhhhHHHHHHHHHHHHHHHHcCCCcccEEEEeccccccccCCCCCcceeccccccccccCCcceeec
Confidence            999999999999999999999998          678888888744      443      223334444333  33335


Q ss_pred             HhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCcccccc----CCCceeeccC-CCCCHHHHHHHHcc
Q psy17622         59 KRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVY----GEDVEVDYRG-YEVTVENFIRLLTA  123 (194)
Q Consensus        59 ~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY----~~~v~IDY~g-~~Vt~~~fl~vL~G  123 (194)
                      +.+.+..|++|..+++++.  +..|+.+++.+|+++++.+|    |++..+.+.. +++|.+.+...++-
T Consensus       106 rgyevtvEnflr~LTgR~~--~~tprSKrlltDe~SNIlIYmtGHGgd~FlKFqd~eelts~dLadai~q  173 (309)
T KOG1349|consen  106 RGYEVTVENFLRVLTGRHP--NNTPRSKRLLTDEGSNILIYLTGHGGDGFLKFQDAEELTSDDLADAIQQ  173 (309)
T ss_pred             ccchhHHHHHHHHHcCCCC--CCCchhhhhcccCCCcEEEEEccCCCccceecccHHHhhhHHHHHHHHH
Confidence            7888999999999999985  55799999999998888888    5667788977 88999999888776

>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones]

Probab=92.73  E-value=0.025  Score=50.84  Aligned_cols=117  Identities=27%  Similarity=0.529  Sum_probs=91.7

Q ss_pred             CCccceEEEEecCcccchhhhhccc----------cCCCcEEEEEeCCCCCccch------------hhhhhhhHHHH--
Q psy17622          2 KHSNNWAVLVDTSRFWFNYRHVANA----------KHSNNWAVLVDTSRFWFNYR------------HVANVLSIYRS--   57 (194)
Q Consensus         2 ~~~~nw~vlv~~s~~w~n~r~~~~~----------~~~~~wavlvagS~~w~NYR------------Hqadv~~~Y~~--   57 (194)
                      .||||||||++||||||||||+||.          +..+...+|++.-+.-.|-|            |..|   .|..  
T Consensus        25 t~tnNwAvLlstSRfwfNYRHmANVl~~Yr~vkrlGipDsQIilm~~dd~acnsRnlfpgsvf~N~Dra~d---lyge~~  101 (382)
T COG5206          25 TNTNNWAVLLSTSRFWFNYRHMANVLVFYRVVKRLGIPDSQIILMSYDDQACNSRNLFPGSVFNNSDRAGD---LYGEDS  101 (382)
T ss_pred             ccCCceEEEEecccceeehhhhhhHHHHHHHHHHcCCCcceEEEEechhhhhhhcccCCcccccCcccccc---eeCccc
Confidence            6999999999999999999999998          67888889886555544444            3333   3332  


Q ss_pred             ---HHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCcccccc----CCCceeeccC-CCCCHHHHHHHHcc
Q psy17622         58 ---VKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVY----GEDVEVDYRG-YEVTVENFIRLLTA  123 (194)
Q Consensus        58 ---L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY----~~~v~IDY~g-~~Vt~~~fl~vL~G  123 (194)
                         .+.+.+..|..|.++.+....|  .|..+++.++++++..+|    |++..+.+.. ++++.|.+...++.
T Consensus       102 eidY~gyevTve~firLLt~r~~en--~p~sKrlltdE~SNIfIYmtGHGgd~FlKFqdaeemtseDladai~q  173 (382)
T COG5206         102 EIDYSGYEVTVEVFIRLLTARSGEN--HPKSKRLLTDESSNIFIYMTGHGGDAFLKFQDAEEMTSEDLADAISQ  173 (382)
T ss_pred             ccccccccchHHHHHHHHHhhccCC--ChhhhhhcccccCcEEEEEccCCCccceecccHHHhhhHHHHHHHHH
Confidence               2566778899999998887433  488999999998888888    5567788877 88999999888776

>smart00115 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues

Probab=90.06  E-value=0.93  Score=38.90  Aligned_cols=56  Identities=16%  Similarity=0.214  Sum_probs=41.1

Q ss_pred             CCCCCHHHHHHHHcc--CccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHH
Q psy17622        109 GYEVTVENFIRLLTA--TSVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDAL  164 (194)
Q Consensus       109 g~~Vt~~~fl~vL~G--k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l  164 (194)
                      ..++|.+.+.+.|.-  ++.+-...|-+++|+.+||+.|+|.-.|++.+.-++|.+.|
T Consensus        49 ~~dlt~~em~~~l~~~~~~~~~~~~d~~v~~~~sHG~~~~l~~~D~~~v~l~~i~~~f  106 (241)
T smart00115       49 KNNLTAEEMLEELKEFAERPEHSDSDSFVCVLLSHGEEGGIYGTDHSPLPLDEIFSLF  106 (241)
T ss_pred             ecCCCHHHHHHHHHHHHhccccCCCCEEEEEEcCCCCCCeEEEecCCEEEHHHHHHhc
Confidence            346677777777754  22233356778899999999999998887777777777666

Cysteine aspartases that mediate programmed cell death (apoptosis). Caspases are synthesised as zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologues.

>cd00032 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis)

Probab=85.16  E-value=1.8  Score=37.00  Aligned_cols=57  Identities=16%  Similarity=0.239  Sum_probs=42.0

Q ss_pred             CCCCCHHHHHHHHccCc-cccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHHH
Q psy17622        109 GYEVTVENFIRLLTATS-VLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDALE  165 (194)
Q Consensus       109 g~~Vt~~~fl~vL~Gk~-l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l~  165 (194)
                      ..++|.+.+.+.|.--. -+....|-+++|+.+||..+.|.-.|++.+.-++|.+.|.
T Consensus        51 ~~nlt~~~~~~~l~~f~~~~~~~~d~~v~~~~sHG~~~~l~~~D~~~v~l~~i~~~f~  108 (243)
T cd00032          51 KNNLTAEEILEELKEFASPDHSDSDSFVCVILSHGEEGGIYGTDGDVVPIDEITSLFN  108 (243)
T ss_pred             eCCCCHHHHHHHHHHHHhccCCCCCeeEEEECCCCCCCEEEEecCcEEEHHHHHHhhc
Confidence            56778888888886511 2345566788999999999999988866777777766654

Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologs.

>PF14538 Raptor_N: Raptor N-terminal CASPase like domain

Probab=85.07  E-value=1.7  Score=35.51  Aligned_cols=54  Identities=22%  Similarity=0.315  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHccCccccCCCccEEEEEeCCCCCc------eeecCCCC----ccCHHHHHHHH
Q psy17622        110 YEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGDG------FLKFQDSE----EVTSQELGDAL  164 (194)
Q Consensus       110 ~~Vt~~~fl~vL~Gk~l~s~~~dnVfvY~tgHGg~g------~i~f~d~~----~l~~~dL~~~l  164 (194)
                      -+.|+|++.+.+..-|- ..+++.|++-|.|||-|.      +-.|.++-    .++-.||.+.+
T Consensus        70 ~dpt~e~~~~~~~~~R~-~a~~~RvLFHYnGhGvP~Pt~~GeIw~f~~~~tqyip~si~dL~~~l  133 (154)
T PF14538_consen   70 LDPTVEDLKRLCQSLRR-NAKDERVLFHYNGHGVPRPTENGEIWVFNKNYTQYIPLSIYDLQSWL  133 (154)
T ss_pred             cCCCHHHHHHHHHHHHh-hCCCceEEEEECCCCCCCCCCCCeEEEEcCCCCcceEEEHHHHHHhc
Confidence            68899999998875332 234489999999999983      44444432    36777776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	194
3bij_A	285	Uncharacterized protein GSU0716; alpha-beta protei	98.35
4af8_A	367	Metacaspase MCA2; hydrolase, cysteine peptidase, c	97.97
4f6o_A	350	Metacaspase-1; rossmann fold, hydrolase; HET: DFH;	97.94
3uoa_B	390	Mucosa-associated lymphoid tissue lymphoma transl	90.67
2h54_A	178	Caspase-1; allosteric site, dimer interface, hydro	87.78

>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}

Probab=98.35  E-value=7.7e-07  Score=76.56  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=60.2

Q ss_pred             hhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCceeeccCCCCCHHHHHHHHccCccc
Q psy17622         48 VANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTATSVL  127 (194)
Q Consensus        48 qadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~IDY~g~~Vt~~~fl~vL~Gk~l~  127 (194)
                      ..|+..+.+.|++.|++   +++++.+                                    +.|.+++++.|..-.-.
T Consensus        30 ~nDa~~~~~~L~~~Gf~---v~~l~~~------------------------------------~~t~~~i~~al~~l~~~   70 (285)
T 3bij_A           30 EADAEDMAAIAAERGFA---VTTLMTK------------------------------------AATRAKVIDAIGKAAKA   70 (285)
T ss_dssp             HHHHHHHHHHHHHTTCE---EEEEEGG------------------------------------GCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCc---eEEecCC------------------------------------ccCHHHHHHHHHHHHHh
Confidence            46899999999999997   5554422                                    15778888887542234


Q ss_pred             cCCCccEEEEEeCCCC-------------CceeecCCCCccCHHHHHHHHHHH
Q psy17622        128 TDEGSNILIYLTGHGG-------------DGFLKFQDSEEVTSQELGDALEQM  167 (194)
Q Consensus       128 s~~~dnVfvY~tgHGg-------------~g~i~f~d~~~l~~~dL~~~l~~M  167 (194)
                      ..++|.+||||+|||.             +++|...|+ .|..+||.+.|+.|
T Consensus        71 ~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~-~i~~~~l~~~l~~l  122 (285)
T 3bij_A           71 LGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDG-ELIDDELYALLGKF  122 (285)
T ss_dssp             CCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSS-EEEHHHHHHHHTTS
T ss_pred             CCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCC-CccHHHHHHHHHhc
Confidence            6788999999999995             357876665 67888999888766

>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A

Probab=97.97  E-value=2.8e-05  Score=70.08  Aligned_cols=109  Identities=15%  Similarity=0.275  Sum_probs=72.0

Q ss_pred             CCCcEEEEEeCCCCC--ccchh-hhhhhhHHHHHHhcCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCce
Q psy17622         28 HSNNWAVLVDTSRFW--FNYRH-VANVLSIYRSVKRLGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDVE  104 (194)
Q Consensus        28 ~~~~wavlvagS~~w--~NYRH-qadv~~~Y~~L~~~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v~  104 (194)
                      ....||+||.-+.+=  .+-+- ..|+-.+.+.|++.|+++++|+++.-++-     .|  +                  
T Consensus        90 ~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~GF~~~~i~~L~D~~~-----~p--~------------------  144 (367)
T 4af8_A           90 GQTVRALFIGINYYGTSAALSGCCNDVKQMLATLQKRGLPINEAVILVDEDN-----FP--G------------------  144 (367)
T ss_dssp             TCCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHTTCCCSEEEEEECCTT-----CT--T------------------
T ss_pred             CCCeEEEEEEeCCCCCccCCCCHHHHHHHHHHHHHHcCCCchheEEeccccc-----cc--c------------------
Confidence            567888888777321  11111 35788899999999999999877643221     11  0                  


Q ss_pred             eeccCCCCCHHHHHHHHccCccccCCCccEEEEEeCCCCC---------c---eeecCCC---CccCHHHHHHHH
Q psy17622        105 VDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGD---------G---FLKFQDS---EEVTSQELGDAL  164 (194)
Q Consensus       105 IDY~g~~Vt~~~fl~vL~Gk~l~s~~~dnVfvY~tgHGg~---------g---~i~f~d~---~~l~~~dL~~~l  164 (194)
                         .....|.+++++.|.--.-...++|.+||||+|||..         |   .|.-.|.   ..|..+||.+.|
T Consensus       145 ---~~~~pTr~nI~~aL~~L~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lL  216 (367)
T 4af8_A          145 ---RTDQPTRDNIVRYMAWLVKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLL  216 (367)
T ss_dssp             ---CCBCCCHHHHHHHHHHHHHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHHH
T ss_pred             ---cccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHH
Confidence               0245688899988854222567899999999999972         2   3554441   257778888773

>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}

Probab=97.94  E-value=1.6e-05  Score=71.14  Aligned_cols=109  Identities=17%  Similarity=0.273  Sum_probs=71.9

Q ss_pred             CCCcEEEEEeCCCC--Cccch-hhhhhhhHHHHHHh-cCCCCCcEEEEecCCCCCCCCCCCCCeeecCCCccccccCCCc
Q psy17622         28 HSNNWAVLVDTSRF--WFNYR-HVANVLSIYRSVKR-LGIPDSHIILMIADDMACNPRNPRPATVFNNANQHIDVYGEDV  103 (194)
Q Consensus        28 ~~~~wavlvagS~~--w~NYR-Hqadv~~~Y~~L~~-~Gi~denIIlm~~DD~a~~p~Np~pG~i~~~~~~~~nlY~~~v  103 (194)
                      .+.+||+||.-+.+  +.+-+ =..|+-.+...|++ .|+++++|+++. |+-.    +|                    
T Consensus        51 ~grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLt-d~~~----~~--------------------  105 (350)
T 4f6o_A           51 TGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILT-DDQN----DL--------------------  105 (350)
T ss_dssp             CSCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEE-TTSS----CG--------------------
T ss_pred             CCCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeec-cccc----cc--------------------
Confidence            56789999887632  01111 12478889999986 599999986653 4320    10                    


Q ss_pred             eeeccCCCCCHHHHHHHHccCccccCCCccEEEEEeCCCCC-------------ceeecCCC---CccCHHHHHHHHHH
Q psy17622        104 EVDYRGYEVTVENFIRLLTATSVLTDEGSNILIYLTGHGGD-------------GFLKFQDS---EEVTSQELGDALEQ  166 (194)
Q Consensus       104 ~IDY~g~~Vt~~~fl~vL~Gk~l~s~~~dnVfvY~tgHGg~-------------g~i~f~d~---~~l~~~dL~~~l~~  166 (194)
                           ....|.+++++.|.--.-...++|.+||||+|||..             ..|+-.|.   ..|..+||.+.|..
T Consensus       106 -----~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~  179 (350)
T 4f6o_A          106 -----VRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVK  179 (350)
T ss_dssp             -----GGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTT
T ss_pred             -----ccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHh
Confidence                 124688899988863222456899999999999972             23664452   26888899887754

>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*

Probab=90.67  E-value=0.4  Score=43.32  Aligned_cols=64  Identities=22%  Similarity=0.261  Sum_probs=38.3

Q ss_pred             CCHHHHHHHHccCccccCCCccEEEEEeCCCC----CceeecCCCC-------ccCHHHHHHHHHHHHHcCCcceeEE
Q psy17622        112 VTVENFIRLLTATSVLTDEGSNILIYLTGHGG----DGFLKFQDSE-------EVTSQELGDALEQMWQKRRYHEVRA  178 (194)
Q Consensus       112 Vt~~~fl~vL~Gk~l~s~~~dnVfvY~tgHGg----~g~i~f~d~~-------~l~~~dL~~~l~~M~~~~~Y~~lv~  178 (194)
                      +|.+++.+.|.--.-...+.|.+++||+|||.    .++|.=.|..       .+..++|.+.|+.   .+-=.++++
T Consensus        49 lT~~eI~~aL~~f~~~~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~---~~~K~kL~I  123 (390)
T 3uoa_B           49 LTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE---KETGLNVFL  123 (390)
T ss_dssp             CCHHHHHHHHHHHHHTCCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH---TTCSEEEEE
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh---cCCCceEEE
Confidence            36677777776411123578999999999994    4777644543       2455555555543   332245655

>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...

Probab=87.78  E-value=1  Score=36.14  Aligned_cols=55  Identities=11%  Similarity=0.069  Sum_probs=36.2

Q ss_pred             CCCCHHHHHHHHcc--CccccCCCccEEEEEeCCCCCceeecCCCC-----ccCHHHHHHHH
Q psy17622        110 YEVTVENFIRLLTA--TSVLTDEGSNILIYLTGHGGDGFLKFQDSE-----EVTSQELGDAL  164 (194)
Q Consensus       110 ~~Vt~~~fl~vL~G--k~l~s~~~dnVfvY~tgHGg~g~i~f~d~~-----~l~~~dL~~~l  164 (194)
                      .++|.+.+...|+-  ++..-...|-+++||.+||..|.|.-.|..     .+.-++|...|
T Consensus        85 ~dlt~~em~~~l~~f~~~~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f  146 (178)
T 2h54_A           85 KNLTASDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNML  146 (178)
T ss_dssp             ESCCHHHHHHHHHHHHTCGGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhhhhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHH
Confidence            45788888888864  222223456678888899999988867752     45555554444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	194
g1qtn.1	242	Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}	92.82
g1pyo.1	257	Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}	91.2
g1sc3.1	261	Interleukin-1beta converting enzyme (a cysteine pr	88.33
d1m72a_	256	Caspase-1 {Fall armyworm (Spodoptera frugiperda) [	85.29
d1nw9b_	277	Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}	83.26

>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}

class: Alpha and beta proteins (a/b)
fold: Caspase-like
superfamily: Caspase-like
family: Caspase catalytic domain
domain: Caspase-1
species: Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]

Probab=85.29  E-value=0.22  Score=39.38  Aligned_cols=53  Identities=17%  Similarity=0.273  Sum_probs=33.8

Q ss_pred             CCCHHHHHHHHccC-ccccCCCccEEEEEeCCCCCceeecCCCCccCHHHHHHHH
Q psy17622        111 EVTVENFIRLLTAT-SVLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELGDAL  164 (194)
Q Consensus       111 ~Vt~~~fl~vL~Gk-~l~s~~~dnVfvY~tgHGg~g~i~f~d~~~l~~~dL~~~l  164 (194)
                      ++|.+.+.+.|.-- ...-++.|-++||+.|||+.|+|.=.|. .+..+++...+
T Consensus        66 nlt~~~m~~~l~~~~~~~~~~~d~~vv~~~~HG~~~~i~~~D~-~~~~~~~~~~~  119 (256)
T d1m72a_          66 NLKSEEINKFIQQTAEMDHSDADCLLVAVLTHGELGMLYAKDT-HYKPDNLWYYF  119 (256)
T ss_dssp             SCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEETTEEECSSS-EECTTHHHHTT
T ss_pred             CCCHHHHHHHHHHHhhhhccCCCeEEEEEeccCcCCEEEecCC-cccchHHhhhh
Confidence            45666777766431 1112345778999999999999874454 45556665544

>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Caspase-like
superfamily: Caspase-like
family: Caspase catalytic domain
domain: Caspase-9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.26  E-value=0.34  Score=37.91  Aligned_cols=36  Identities=14%  Similarity=0.193  Sum_probs=24.7

Q ss_pred             CCCccEEEEEeCCCCC-------ceeecCCCCccCHHHHHHHH
Q psy17622        129 DEGSNILIYLTGHGGD-------GFLKFQDSEEVTSQELGDAL  164 (194)
Q Consensus       129 ~~~dnVfvY~tgHGg~-------g~i~f~d~~~l~~~dL~~~l  164 (194)
                      .+.|.++|||.|||..       +.+.-+|++.+.-+++...+
T Consensus        86 ~~~d~~v~~~~gHG~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  128 (277)
T d1nw9b_          86 GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIF  128 (277)
T ss_dssp             TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTT
T ss_pred             cCCCEEEEEEeCCCcccccccccCcccCCccccccHHHHHHHh
Confidence            5679999999999964       33333555566666666554