Psyllid ID: psy17660


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
FSRSCVGGNRFFVSNFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFRNDLR
cccccccccccccccccccccccEEEEEccccccccEEEEEccEEEEEEEEcccccccEEEEEEEEEEEEccccEEEEEEEEEcccccccccccccEEEEHHHHHHccccEEEEcccEEEEccccc
ccccccccccccccccccccccEEEEEEEcccccHHEEEEEcccEEEEEEEccccccccEEEEEEEEEccccccEEEEEEEEccccccHHccccccEEEEHHHHHcccccEEEccccEEEEEcccc
fsrscvggnrffvsnfqseksndlrFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNlskseslysvgmkplmysTKEAELnkigwrrcgeNITYFRNDLR
fsrscvggnrffvsnfqseksndLRFESRfesgnlakavkisdnYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKeaelnkigwrrcgenityfrndlr
FSRSCVGGNRFFVSNFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFRNDLR
*********RFFV******************SGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFR****
*S*S**************EKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEA*****GWRRCGENITYFRNDL*
FSRSCVGGNRFFVSNFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFRNDLR
**********FFVSNFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFRND**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FSRSCVGGNRFFVSNFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYFRNDLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query126 2.2.26 [Sep-21-2011]
Q9VY99 1201 Cytosolic carboxypeptidas yes N/A 0.984 0.103 0.626 6e-40
Q5U5Z8 902 Cytosolic carboxypeptidas yes N/A 0.984 0.137 0.570 2e-35
Q8CDK2 862 Cytosolic carboxypeptidas yes N/A 0.992 0.145 0.550 8e-35
Q8CDP0 1006 Cytosolic carboxypeptidas no N/A 0.952 0.119 0.541 1e-34
Q4R632 840 Cytosolic carboxypeptidas N/A N/A 0.992 0.148 0.550 1e-34
Q0P4M4 967 Cytosolic carboxypeptidas yes N/A 0.865 0.112 0.587 1e-33
Q8NEM8 1001 Cytosolic carboxypeptidas no N/A 0.984 0.123 0.524 1e-33
E1B9D8 1003 Cytosolic carboxypeptidas no N/A 0.944 0.118 0.504 1e-31
A6H8T7 721 Cytosolic carboxypeptidas yes N/A 0.992 0.173 0.527 4e-31
O76373 1015 Cytosolic carboxypeptidas yes N/A 0.873 0.108 0.491 3e-25
>sp|Q9VY99|NNAD_DROME Cytosolic carboxypeptidase NnaD OS=Drosophila melanogaster GN=NnaD PE=2 SV=2 Back     alignment and function desciption
 Score =  162 bits (410), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 79/126 (62%), Positives = 94/126 (74%), Gaps = 2/126 (1%)

Query: 1   FSRSCVGGNRFFVS--NFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNR 58
           FSRS VGG RF  +      E+ + L FESRFESGNLAKAV+I+  YYELYLR DLYT+R
Sbjct: 708 FSRSAVGGARFMTNCHPMNPEEYDGLEFESRFESGNLAKAVQITPTYYELYLRPDLYTSR 767

Query: 59  HMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENI 118
             QWFYFR+  TR  + YRFSIVNL KS+SLY+ GM+P+MYST  A+    GWRRCG+NI
Sbjct: 768 SKQWFYFRVRRTRRKMLYRFSIVNLVKSDSLYNDGMQPVMYSTLGAKEKSEGWRRCGDNI 827

Query: 119 TYFRND 124
            Y+RND
Sbjct: 828 CYYRND 833




Metallocarboxypeptidase.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 1EC: 7EC: .EC: -
>sp|Q5U5Z8|CBPC2_HUMAN Cytosolic carboxypeptidase 2 OS=Homo sapiens GN=AGBL2 PE=2 SV=2 Back     alignment and function description
>sp|Q8CDK2|CBPC2_MOUSE Cytosolic carboxypeptidase 2 OS=Mus musculus GN=Agbl2 PE=2 SV=1 Back     alignment and function description
>sp|Q8CDP0|CBPC3_MOUSE Cytosolic carboxypeptidase 3 OS=Mus musculus GN=Agbl3 PE=1 SV=1 Back     alignment and function description
>sp|Q4R632|CBPC2_MACFA Cytosolic carboxypeptidase 2 OS=Macaca fascicularis GN=AGBL2 PE=2 SV=1 Back     alignment and function description
>sp|Q0P4M4|CBPC2_XENTR Cytosolic carboxypeptidase 2 OS=Xenopus tropicalis GN=agbl2 PE=2 SV=1 Back     alignment and function description
>sp|Q8NEM8|CBPC3_HUMAN Cytosolic carboxypeptidase 3 OS=Homo sapiens GN=AGBL3 PE=2 SV=2 Back     alignment and function description
>sp|E1B9D8|CBPC3_BOVIN Cytosolic carboxypeptidase 3 OS=Bos taurus GN=AGBL3 PE=3 SV=1 Back     alignment and function description
>sp|A6H8T7|CBPC2_DANRE Cytosolic carboxypeptidase 2 OS=Danio rerio GN=zte25 PE=2 SV=1 Back     alignment and function description
>sp|O76373|CBPC1_CAEEL Cytosolic carboxypeptidase 1 OS=Caenorhabditis elegans GN=ccpp-1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
357622827 1022 hypothetical protein KGM_19915 [Danaus p 0.984 0.121 0.712 1e-47
242014619 863 conserved hypothetical protein [Pediculu 0.984 0.143 0.674 2e-46
189236481 897 PREDICTED: similar to CG32627 CG32627-PB 1.0 0.140 0.658 2e-45
270005967 875 hypothetical protein TcasGA2_TC008100 [T 0.984 0.141 0.661 4e-45
347963194 1023 AGAP000113-PA [Anopheles gambiae str. PE 0.984 0.121 0.624 2e-41
347963196 788 AGAP000113-PB [Anopheles gambiae str. PE 0.984 0.157 0.624 9e-41
307207432 1139 Cytosolic carboxypeptidase 3 [Harpegnath 0.984 0.108 0.549 1e-40
383859802 1047 PREDICTED: cytosolic carboxypeptidase 2- 0.984 0.118 0.560 8e-40
340722431 1092 PREDICTED: cytosolic carboxypeptidase 2- 0.984 0.113 0.532 6e-39
340722429 1110 PREDICTED: cytosolic carboxypeptidase 2- 0.984 0.111 0.532 6e-39
>gi|357622827|gb|EHJ74206.1| hypothetical protein KGM_19915 [Danaus plexippus] Back     alignment and taxonomy information
 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 105/125 (84%), Gaps = 1/125 (0%)

Query: 1   FSRSCVGGNRFFVSNFQSEKSND-LRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRH 59
           FSRS VGG+R F+S   +   +D LRFESRFESGNLAKAVKI+  YYEL+LRTDLYTNRH
Sbjct: 136 FSRSTVGGSRLFLSACTTAGGDDELRFESRFESGNLAKAVKITSAYYELHLRTDLYTNRH 195

Query: 60  MQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENIT 119
           MQWFYFR+ NTR    YRFSIVNLSK ESLY+ GM+PL+YSTK+A+L+ IGWRRCG+NI 
Sbjct: 196 MQWFYFRVTNTRKQTMYRFSIVNLSKPESLYNEGMRPLLYSTKDAQLHSIGWRRCGDNIA 255

Query: 120 YFRND 124
           Y++ND
Sbjct: 256 YYKND 260




Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014619|ref|XP_002427984.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512483|gb|EEB15246.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|189236481|ref|XP_974903.2| PREDICTED: similar to CG32627 CG32627-PB [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270005967|gb|EFA02415.1| hypothetical protein TcasGA2_TC008100 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|347963194|ref|XP_311036.5| AGAP000113-PA [Anopheles gambiae str. PEST] gi|333467313|gb|EAA06129.5| AGAP000113-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|347963196|ref|XP_003436921.1| AGAP000113-PB [Anopheles gambiae str. PEST] gi|333467314|gb|EGK96525.1| AGAP000113-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|307207432|gb|EFN85147.1| Cytosolic carboxypeptidase 3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383859802|ref|XP_003705381.1| PREDICTED: cytosolic carboxypeptidase 2-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340722431|ref|XP_003399609.1| PREDICTED: cytosolic carboxypeptidase 2-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|340722429|ref|XP_003399608.1| PREDICTED: cytosolic carboxypeptidase 2-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query126
FB|FBgn0052627 1201 NnaD "Drosophila Nna1 ortholog 0.984 0.103 0.626 1.4e-36
UNIPROTKB|J9P8J4 863 AGBL2 "Uncharacterized protein 0.984 0.143 0.570 4.9e-33
UNIPROTKB|F1PAV7 909 AGBL2 "Uncharacterized protein 0.984 0.136 0.570 5.6e-33
UNIPROTKB|F6U0I4 824 AGBL2 "Cytosolic carboxypeptid 0.984 0.150 0.570 7.3e-33
UNIPROTKB|Q5U5Z8 902 AGBL2 "Cytosolic carboxypeptid 0.984 0.137 0.570 9e-33
UNIPROTKB|H9KV53 904 AGBL2 "Cytosolic carboxypeptid 0.984 0.137 0.570 9e-33
UNIPROTKB|D4A661 809 Agbl2 "Protein Agbl2" [Rattus 0.992 0.154 0.550 1.9e-32
RGD|1306827 834 Agbl2 "ATP/GTP binding protein 0.992 0.149 0.550 2e-32
UNIPROTKB|D4A3W7 860 Agbl2 "Protein Agbl2" [Rattus 0.992 0.145 0.550 2.2e-32
RGD|1561995 871 Agbl3 "ATP/GTP binding protein 0.992 0.143 0.544 2.2e-32
FB|FBgn0052627 NnaD "Drosophila Nna1 ortholog" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 406 (148.0 bits), Expect = 1.4e-36, P = 1.4e-36
 Identities = 79/126 (62%), Positives = 94/126 (74%)

Query:     1 FSRSCVGGNRFFVS--NFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNR 58
             FSRS VGG RF  +      E+ + L FESRFESGNLAKAV+I+  YYELYLR DLYT+R
Sbjct:   708 FSRSAVGGARFMTNCHPMNPEEYDGLEFESRFESGNLAKAVQITPTYYELYLRPDLYTSR 767

Query:    59 HMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENI 118
               QWFYFR+  TR  + YRFSIVNL KS+SLY+ GM+P+MYST  A+    GWRRCG+NI
Sbjct:   768 SKQWFYFRVRRTRRKMLYRFSIVNLVKSDSLYNDGMQPVMYSTLGAKEKSEGWRRCGDNI 827

Query:   119 TYFRND 124
              Y+RND
Sbjct:   828 CYYRND 833




GO:0017076 "purine nucleotide binding" evidence=ISS
GO:0004181 "metallocarboxypeptidase activity" evidence=IEA
GO:0006508 "proteolysis" evidence=IEA
GO:0008270 "zinc ion binding" evidence=IEA
GO:0002164 "larval development" evidence=IMP
GO:0007005 "mitochondrion organization" evidence=IMP
GO:0003407 "neural retina development" evidence=IMP
GO:0005739 "mitochondrion" evidence=IDA
UNIPROTKB|J9P8J4 AGBL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAV7 AGBL2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6U0I4 AGBL2 "Cytosolic carboxypeptidase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5U5Z8 AGBL2 "Cytosolic carboxypeptidase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H9KV53 AGBL2 "Cytosolic carboxypeptidase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|D4A661 Agbl2 "Protein Agbl2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1306827 Agbl2 "ATP/GTP binding protein-like 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|D4A3W7 Agbl2 "Protein Agbl2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1561995 Agbl3 "ATP/GTP binding protein-like 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5U5Z8CBPC2_HUMAN3, ., 4, ., 1, 7, ., -0.57030.98410.1374yesN/A
A6H8T7CBPC2_DANRE3, ., 4, ., 1, 7, ., -0.52710.99200.1733yesN/A
Q0P4M4CBPC2_XENTR3, ., 4, ., 1, 7, ., -0.58710.86500.1127yesN/A
Q9VY99NNAD_DROME3, ., 4, ., 1, 7, ., -0.62690.98410.1032yesN/A
Q8CDK2CBPC2_MOUSE3, ., 4, ., 1, 7, ., -0.55030.99200.1450yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 126
KOG3641|consensus 650 99.95
>KOG3641|consensus Back     alignment and domain information
Probab=99.95  E-value=4.7e-28  Score=206.26  Aligned_cols=106  Identities=42%  Similarity=0.728  Sum_probs=99.8

Q ss_pred             cCCCCCCceEEEeecCCcchheeeeeCCeeEEEEeecCCCCCCeeeEEEEEEeeeccCeeEEEEEeccccccccccCCCe
Q psy17660         16 FQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMK   95 (126)
Q Consensus        16 ~~~~~~~~l~F~S~FeSGNL~~v~~~~~~ey~L~l~~D~~t~~~~qWFyF~V~~~~~~~~~~f~I~N~~k~~sly~~Gm~   95 (126)
                      .+.+..+.|.|.|.||||||.+|.++...||+|.++||++.+.|.|||||.|+| .+++.+.|+|+|+.|+.++|+.||+
T Consensus       242 ~~~p~~~~l~f~s~fesgnLr~Viqv~~~eydL~~~pDtn~~~~~~wfYfevsg-~~s~ry~FnivN~sk~~tqfe~gmq  320 (650)
T KOG3641|consen  242 STIPHNAELWFQSEFESGNLRSVIQVPQQEYDLFLAPDTNPNEYGVWFYFEVSG-RASVRYCFNIVNFSKSSTQFENGMQ  320 (650)
T ss_pred             cCCCCCcceeeecccccCCcceeEEecccccceeecCCCCCcccceEEEEEecC-CcCcceEEEEEeeccchhHHhcccC
Confidence            445688999999999999999999999999999999999999999999999999 8999999999999999999999999


Q ss_pred             EEEEechhhhcCCCCeEEeCCCeEEeecCC
Q psy17660         96 PLMYSTKEAELNKIGWRRCGENITYFRNDL  125 (126)
Q Consensus        96 P~v~s~~~~~~~~~~W~R~g~~i~Yyrn~~  125 (126)
                      |.|+|.+++   .-+|.|.|++||||||..
T Consensus       321 p~mys~nea---~~~~~r~~~~icYyrn~~  347 (650)
T KOG3641|consen  321 PKMYSLNEA---HNDFRRFSEKICYYRNRR  347 (650)
T ss_pred             cceeehhhh---hccccccCcceeeeeccc
Confidence            999999877   567899999999999974




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query126
4a37_A 388 Metallo-carboxypeptidase; metallo-protease, hydrol 8e-24
3l2n_A 395 Peptidase M14, carboxypeptidase A; putative carbox 7e-20
3k2k_A 403 Putative carboxypeptidase; structural genomics, jo 2e-14
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Length = 388 Back     alignment and structure
 Score = 93.3 bits (231), Expect = 8e-24
 Identities = 18/107 (16%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 15  NFQSEKSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANV 74
           +    +   ++  + F+SGN+            L +R DL +  H QWF+F++       
Sbjct: 5   SHPQFEKGAMQIRADFDSGNIQVIDASDPRRIRLAIRPDLASQ-HFQWFHFKVEGMAPAT 63

Query: 75  YYRFSIVNLSKSESLYSVGMKPLMYSTKEAELNKIGWRRCGENITYF 121
            + F++VN  +S   ++      + S       ++  +   + + + 
Sbjct: 64  EHCFTLVNAGQSAYSHAWSGYQAVASYDGERWFRVPSQYDADGLHFQ 110


>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans} Length = 395 Back     alignment and structure
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Length = 403 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query126
4a37_A 388 Metallo-carboxypeptidase; metallo-protease, hydrol 99.9
3l2n_A 395 Peptidase M14, carboxypeptidase A; putative carbox 99.89
3k2k_A 403 Putative carboxypeptidase; structural genomics, jo 99.89
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Back     alignment and structure
Probab=99.90  E-value=1.3e-24  Score=178.85  Aligned_cols=89  Identities=24%  Similarity=0.432  Sum_probs=76.8

Q ss_pred             CCCceEEEeecCCcchheeeeeCCeeEEEEeecCCCCCCeeeEEEEEEeeeccCeeEEEEEeccccccccccCCCeE---
Q psy17660         20 KSNDLRFESRFESGNLAKAVKISDNYYELYLRTDLYTNRHMQWFYFRINNTRANVYYRFSIVNLSKSESLYSVGMKP---   96 (126)
Q Consensus        20 ~~~~l~F~S~FeSGNL~~v~~~~~~ey~L~l~~D~~t~~~~qWFyF~V~~~~~~~~~~f~I~N~~k~~sly~~Gm~P---   96 (126)
                      +++.|.|+|+||||||.+|.++++.||+|+|+||+++ +|+|||||+|+|.++++.++|+|+|+.|  ++|++||+|   
T Consensus        10 ~~~~l~f~s~FesGnl~~~~~~~~~~~~l~i~~D~~~-~~~qWf~F~v~~~~~~~~~~~~i~n~~~--s~y~~g~~~y~~   86 (388)
T 4a37_A           10 EKGAMQIRADFDSGNIQVIDASDPRRIRLAIRPDLAS-QHFQWFHFKVEGMAPATEHCFTLVNAGQ--SAYSHAWSGYQA   86 (388)
T ss_dssp             ----CEEECCSTTCBCEEEECSCTTSEEEECCCCTTS-SCCCCCEEEEESCCTTCCEEEEETTGGG--STTGGGGTTCCC
T ss_pred             CCCCEEEeccCCCCccEEEEecCCcEEEEEECCCCCC-CcceeeEEEEecCCCCeEEEEEEEeCch--hhhhccccccce
Confidence            4677999999999999999999999999999999997 8999999999999999999999999987  899999765   


Q ss_pred             EEEechhhhcCCCCeEEeCCC
Q psy17660         97 LMYSTKEAELNKIGWRRCGEN  117 (126)
Q Consensus        97 ~v~s~~~~~~~~~~W~R~g~~  117 (126)
                      ++.      ..+++|.|+++.
T Consensus        87 ~~s------~~~~~W~r~~~~  101 (388)
T 4a37_A           87 VAS------YDGERWFRVPSQ  101 (388)
T ss_dssp             EEE------SSSSSCEECCEE
T ss_pred             eEe------cCCCCeEECCcE
Confidence            333      247899999854



>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans} Back     alignment and structure
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00