Psyllid ID: psy17744

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MYDESIDVVNAEEVQSPTGSVSSGENGEARVPMKIESSLRPGSAMKMQLSEHQTHIPLHSRTNSPRGDSSFDEDDYEDEDEDGDDGGEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPGSGNNGGGTPMRLN
Secondary Structure (PSIPRED)
cccccEEccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHHccccccccHHHHHHccccHHHcHHHHHHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEcccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHcccccEcccccccccccccccccccccHEEEcccccccccccEEEEEcccccccccHHHHHHHHHHHccccccccccEEcccccHHHcHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MYDESIdvvnaeevqsptgsvssgengearvpmkiesslrpgsamkmqlsehqthiplhsrtnsprgdssfdeddyedededgddggegggadkaydplefahlaTSTDLKEMFAYIEKytpqpidltyklrpfipdyipavgdiDAFIkvarpdgrpdslgltvldepcfeqsdpailnlqlrqsskcptsskaTIIKKVEDADKNKKAIDRWIKDIgdlhknkpppsvhysrgmpdldNLMQEWSNDVEQTisevglppedldcdLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQsssnqnaaypgsgnngggtpmrln
Flexible Loop (DISEMBL)
mydesidvvnaeevqsptgsvssgengearvpMKIESSLRPGSAMKMQLSEHqthiplhsrtnsprgdsSFDEDDYEDEDEDGDDGGEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLqlrqsskcptsskatiikkvedadknkkAIDRWIKdigdlhknkpppsvHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSsnqnaaypgsgnngggtpmrln
Low Complexity Region (SEG)
MYDESIDVVNAEEVQSPTGSVSSGENGEARVPMKIESSLRPGSAMKMQLSEHQTHIPLHSRTNSPRGDSSFdeddyedededgddggegggadkaydPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYaaiqsssnqnaaYPGSGNNGGGTPMRLN
Disordered region (IsUnstruct)
************************************************************************************************DPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQ***AILNL****************************AIDRWIKDIG********************************QTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAI*************************
Disordered Region (DISOPRED)
MYDESIDVVN***************************************************************************************PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNL***************************KAIDRWIKDIGDLH***P******SRGMPDLDNLMQEWSNDVEQTI***GLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSS**********************
Disordered Region (DISEMBL)
MYDESIDVVNAE*****************RVPMKIESSLRPGSAMKMQLSEHQTHIPLH*****************************GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQ*********ATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPGSGNNGGGTPMRLN
Disordered Region (DISPRO)
****SIDVVNA********************************************************************************ADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYP**************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYDESIDVVNAEEVQSPTGSVSSGENGEARVPMKIESSLRPGSAMKMQLSEHQTHIPLHSRTNSPRGDSSFDEDDYEDEDEDGDDGGEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPGSGNNGGGTPMRLN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	326	2.2.26 [Sep-21-2011]
Q1LZB4	301	Intraflagellar transport	yes	N/A	0.690	0.747	0.542	4e-71
Q9NQC8	304	Intraflagellar transport	no	N/A	0.690	0.740	0.542	5e-71
Q6AXQ9	301	Intraflagellar transport	yes	N/A	0.690	0.747	0.542	9e-71
Q9DB07	301	Intraflagellar transport	yes	N/A	0.690	0.747	0.542	1e-70
A7MBP4	384	Intraflagellar transport	yes	N/A	0.687	0.583	0.52	4e-70
Q5DHJ5	330	Intraflagellar transport	N/A	N/A	0.662	0.654	0.522	1e-67
A2T2X4	344	Intraflagellar transport	N/A	N/A	0.644	0.610	0.478	5e-56

>sp|Q1LZB4|IFT46_BOVIN Intraflagellar transport protein 46 homolog OS=Bos taurus GN=IFT46 PE=2 SV=1

 Score =  268 bits (685), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 122/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 54  GAPLEGAYDPADYEHLPVSAEVKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 113

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 114 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNP 173

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 174 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSL 233

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 234 AEYIDMICAILDIPVYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 278

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. May play a role in chondrocyte maturation and skeletogenesis.
Bos taurus (taxid: 9913)

>sp|Q9NQC8|IFT46_HUMAN Intraflagellar transport protein 46 homolog OS=Homo sapiens GN=IFT46 PE=2 SV=1

 Score =  268 bits (685), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 122/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 57  GAPLEGAYDPADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 116

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 117 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNP 176

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 177 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSL 236

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 237 AEYIDMICAILDIPVYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 281

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. May play a role in chondrocyte maturation and skeletogenesis.

Homo sapiens (taxid: 9606)

>sp|Q6AXQ9|IFT46_RAT Intraflagellar transport protein 46 homolog OS=Rattus norvegicus GN=Ift46 PE=2 SV=2

 Score =  267 bits (682), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 122/225 (54%), Positives = 169/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 54  GAPLEGAYDPADYEHLPVSAEIKELFEYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 113

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 114 LKVPRPDGKPDHLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNP 173

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 174 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTVEIDCSL 233

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 234 AEYIDMICAILDIPFYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 278

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. May play a role in chondrocyte maturation and skeletogenesis.

Rattus norvegicus (taxid: 10116)

>sp|Q9DB07|IFT46_MOUSE Intraflagellar transport protein 46 homolog OS=Mus musculus GN=Ift46 PE=1 SV=1

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 122/225 (54%), Positives = 169/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 54  GAPLEGAYDPADYEHLPVSAEIKELFEYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 113

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 114 LKVPRPDGKPDHLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNP 173

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 174 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTVEIDCSL 233

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 234 AEYIDMICAILDIPFYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 278

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. May play a role in chondrocyte maturation and skeletogenesis.

Mus musculus (taxid: 10090)

>sp|A7MBP4|IFT46_DANRE Intraflagellar transport protein 46 homolog OS=Danio rerio GN=ift46 PE=2 SV=2

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 117/225 (52%), Positives = 171/225 (76%), Gaps = 1/225 (0%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  + ++KE+F YI +YTPQ I+L +KL+PFIPD+IPAVGDIDAF
Sbjct: 139 GSAPEGAYDPADYEHLPVTGEIKELFQYITRYTPQTIELDHKLKPFIPDFIPAVGDIDAF 198

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEPC +QSDP +L+L L ++SK    ++   +K +E+ +KN 
Sbjct: 199 LKVPRPDGKPDNLGLLVLDEPCTKQSDPTVLSLWLSENSKQHNVTEVK-VKSIENPEKNP 257

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D+LMQEW ++ E+ + +V LP  D+DCDL
Sbjct: 258 KAIDNWIESISELHRSKPPATVHYTRPMPDIDSLMQEWPSEFEELLGKVNLPTADIDCDL 317

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             Y+D++  ILDIP +++RI +LHV+F+LY+  ++S +  +A  G
Sbjct: 318 AEYVDMICGILDIPVYKNRIHSLHVLFTLYSEFKNSQHFKSATDG 362

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in early embryonic development.

Danio rerio (taxid: 7955)

>sp|Q5DHJ5|IFT46_SCHJA Intraflagellar transport protein 46 homolog OS=Schistosoma japonicum GN=SJCHGC08984 PE=2 SV=1

 Score =  256 bits (654), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 116/222 (52%), Positives = 160/222 (72%), Gaps = 6/222 (2%)

Query: 85  DGGEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGD 144
           D  EG      Y+P ++ HL  S+++KE+F YI++YTPQ I+L  KL+PFIPDYIPAVGD
Sbjct: 106 DATEG-----VYNPADYEHLTVSSEIKEIFEYIQRYTPQTIELETKLKPFIPDYIPAVGD 160

Query: 145 IDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDA 204
           IDAF+KV RPDG+PD LGL VLDEPC  QSDP +L+LQLR  SK  T++K   +K +E+A
Sbjct: 161 IDAFLKVPRPDGKPDYLGLLVLDEPCANQSDPTVLDLQLRALSK-QTTTKQVTVKSLENA 219

Query: 205 DKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDL 264
           +   KAI+ WIK I DL++ KPPP+VHY++ MP++  LM EW    E++IS + L    L
Sbjct: 220 EHQTKAIENWIKSIADLYRTKPPPTVHYTKNMPEISQLMSEWPKSFEESISNMQLSLSQL 279

Query: 265 DCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSN 306
           DC L  Y+D++ A+LDIP + +RI +LH++FSLY   ++S +
Sbjct: 280 DCSLKDYVDIICALLDIPVYNNRIHSLHLLFSLYLEFKNSQH 321

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia.

Schistosoma japonicum (taxid: 6182)

>sp|A2T2X4|IFT46_CHLRE Intraflagellar transport protein 46 OS=Chlamydomonas reinhardtii GN=IFT46 PE=1 SV=1

 Score =  218 bits (555), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 1/211 (0%)

Query: 95  AYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARP 154
           AY+  E+ HL    D++E+F+YI +Y PQ ++L  +++PFIPDYIPAVG ID FIKV RP
Sbjct: 101 AYNAQEYKHLNVGEDVRELFSYIGRYKPQTVELDTRIKPFIPDYIPAVGGIDEFIKVPRP 160

Query: 155 DGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK-KAIDR 213
           D +PD LGL VLDEP  +QSDP +L LQLRQ SK    +KA ++ ++E  D+NK K I +
Sbjct: 161 DTKPDYLGLKVLDEPAAKQSDPTVLTLQLRQLSKEAPGAKADMVGRLEHTDENKAKKIQQ 220

Query: 214 WIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYID 273
           WI  I D+HK KP  +V+YS+ MP+++ LMQEW  +VE  +  + +P  D++ D+ TY  
Sbjct: 221 WIASINDIHKAKPAATVNYSKRMPEIEALMQEWPPEVETFLKTMHMPSGDVELDIKTYAR 280

Query: 274 LMAAILDIPRFESRIETLHVIFSLYAAIQSS 304
           L+  +LDIP ++  +E+LHV+F+LY   +++
Sbjct: 281 LVCTLLDIPVYDDPVESLHVLFTLYLEFKNN 311

Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. Plays a role in maintaining IFT complex B stability.

Chlamydomonas reinhardtii (taxid: 3055)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
196003880	241	hypothetical protein TRIADDRAFT_4027 [Tr	0.690	0.933	0.548	5e-72
443714026	373	hypothetical protein CAPTEDRAFT_181738 [	0.665	0.581	0.545	1e-71
390359137	320	PREDICTED: intraflagellar transport prot	0.690	0.703	0.539	6e-71
395520142	408	PREDICTED: intraflagellar transport prot	0.690	0.551	0.546	7e-70
334330377	357	PREDICTED: intraflagellar transport prot	0.690	0.630	0.546	7e-70
301785007	301	PREDICTED: UPF0360 protein C11orf60 homo	0.696	0.754	0.541	9e-70
395848514	303	PREDICTED: intraflagellar transport prot	0.690	0.742	0.546	1e-69
355695657	352	intraflagellar transport 46-like protein	0.690	0.639	0.542	1e-69
260841216	262	hypothetical protein BRAFLDRAFT_168499 [	0.668	0.832	0.552	1e-69
198430260	361	PREDICTED: similar to Ift46 protein [Cio	0.720	0.650	0.512	1e-69

>gi|196003880|ref|XP_002111807.1| hypothetical protein TRIADDRAFT_4027 [Trichoplax adhaerens] gi|190585706|gb|EDV25774.1| hypothetical protein TRIADDRAFT_4027, partial [Trichoplax adhaerens]

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 124/226 (54%), Positives = 174/226 (76%), Gaps = 1/226 (0%)

Query: 79  EDEDGDDGGEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDY 138
           E +  +D     G + AYDP EFA+L  ++++K++F YI +YTP  I+L  KLRPFIPDY
Sbjct: 16  EKDQSNDASHHEGQEGAYDPAEFANLPVNSEIKDLFQYITRYTPHSIELDTKLRPFIPDY 75

Query: 139 IPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATII 198
           IPAVGDIDAFIKV RPD + D+LG+ +LDEPC  QSDP +L+LQLR  SK  +S+K+  I
Sbjct: 76  IPAVGDIDAFIKVPRPDNKTDTLGMAILDEPCANQSDPTVLDLQLRTISK-QSSAKSVSI 134

Query: 199 KKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVG 258
           + ++ ADKN KAID WI+ IG+LH+ KPPP+VHY++ MPD+++LMQEW  + E+ + +VG
Sbjct: 135 RSIDHADKNSKAIDAWIQSIGELHRQKPPPNVHYTKNMPDVESLMQEWPAEFEELLEKVG 194

Query: 259 LPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSS 304
           LP  DLDCDL+ Y+D++  +LDIP + S+IE+LHV+F+LY+A ++S
Sbjct: 195 LPTADLDCDLSQYVDIVLGLLDIPVYNSKIESLHVLFTLYSAFKNS 240

Source: Trichoplax adhaerens

Species: Trichoplax adhaerens

Genus: Trichoplax

Phylum: Placozoa

Superkingdom: Eukaryota

>gi|443714026|gb|ELU06595.1| hypothetical protein CAPTEDRAFT_181738 [Capitella teleta]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 119/218 (54%), Positives = 172/218 (78%), Gaps = 1/218 (0%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           GG  + AYDP ++ +L  ++D+KE+F+YI +YTPQ I+L +KLRPFIPD+IPAVGDIDAF
Sbjct: 131 GGAVEGAYDPSDYENLPVTSDIKELFSYITRYTPQSIELDHKLRPFIPDFIPAVGDIDAF 190

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           IKV RPD +PD LGL+VLDEPC  QSDP +L+L LR  SK  T+ K   +K +E+A++N 
Sbjct: 191 IKVPRPDSKPDQLGLSVLDEPCARQSDPTVLDLTLRSISKQ-TTVKQVTVKSIENAERNP 249

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KA+D WI  I +LH++KPPP+VHY++ MPD+DNLMQEW  + E+ + E+ LP  DLDCDL
Sbjct: 250 KAVDNWIDSISELHRSKPPPNVHYTKNMPDIDNLMQEWPPEFEELLKEISLPSADLDCDL 309

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSN 306
           +TY++++  +LDIP ++S+I++LHV+F+L++  ++S +
Sbjct: 310 STYVEIICGLLDIPIYKSKIQSLHVLFTLFSEFKNSQH 347

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|390359137|ref|XP_795443.3| PREDICTED: intraflagellar transport protein 46 homolog [Strongylocentrotus purpuratus]

 Score =  273 bits (699), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 124/230 (53%), Positives = 177/230 (76%), Gaps = 5/230 (2%)

Query: 81  EDGDDGGEGGGADK----AYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIP 136
           E  DD   G   +K    AYDP E+ +LA ++++KE+F YI +YTPQ I+L +KL+PFIP
Sbjct: 63  EQSDDFETGPMENKSRLIAYDPAEYENLAVTSEIKELFQYITRYTPQTIELDHKLKPFIP 122

Query: 137 DYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKAT 196
           DYIPAVGDIDAFIK+ RPDG  +SLGLTVLDEPC +QSDP +L+LQLR  SK  T+SKA 
Sbjct: 123 DYIPAVGDIDAFIKIPRPDGEEESLGLTVLDEPCAKQSDPTVLDLQLRAISK-QTTSKAM 181

Query: 197 IIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISE 256
            ++ +++A KN K I+ WI+ I DLH++KPPP+VHY++ MP++D+LMQEW  + E+ +  
Sbjct: 182 TVRSIQEASKNPKLINNWIESISDLHRSKPPPTVHYTKTMPEIDDLMQEWPAEFEELLKT 241

Query: 257 VGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSN 306
           VGLP  D+DCDL+ Y+D++ +ILDIP ++S+I+ LHV+F+L++  ++S +
Sbjct: 242 VGLPTADIDCDLSQYVDMICSILDIPVYQSKIQALHVLFTLFSEFKNSQH 291

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|395520142|ref|XP_003764196.1| PREDICTED: intraflagellar transport protein 46 homolog [Sarcophilus harrisii]

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 123/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 161 GAPLEGAYDPADYEHLPVSAEIKELFQYITRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 220

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 221 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQQMKVKSLEDAEKNP 280

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  D+DC L
Sbjct: 281 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTADIDCSL 340

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 341 AEYIDMICAILDIPIYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 385

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334330377|ref|XP_001380694.2| PREDICTED: intraflagellar transport protein 46 homolog isoform 1 [Monodelphis domestica]

 Score =  270 bits (690), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 123/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 110 GAPLEGAYDPADYEHLPVSAEIKELFQYITRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 169

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 170 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQQMKVKSLEDAEKNP 229

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  D+DC L
Sbjct: 230 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTADIDCSL 289

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 290 AEYIDMICAILDIPIYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 334

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301785007|ref|XP_002927917.1| PREDICTED: UPF0360 protein C11orf60 homolog [Ailuropoda melanoleuca]

 Score =  270 bits (689), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 123/227 (54%), Positives = 171/227 (75%)

Query: 87  GEGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDID 146
           G G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDID
Sbjct: 52  GHGAPLEGAYDPADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDID 111

Query: 147 AFIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADK 206
           AF+KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+K
Sbjct: 112 AFLKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEK 171

Query: 207 NKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDC 266
           N KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC
Sbjct: 172 NPKAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDC 231

Query: 267 DLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
            L  YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 232 SLAEYIDMICAILDIPIYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 278

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395848514|ref|XP_003796895.1| PREDICTED: intraflagellar transport protein 46 homolog [Otolemur garnettii]

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 123/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP +F HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 56  GAPLEGAYDPADFEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 115

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 116 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNVTQHMKVKSLEDAEKNP 175

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 176 KAIDMWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSL 235

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 236 AEYIDMICAILDIPVYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 280

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355695657|gb|AES00083.1| intraflagellar transport 46-like protein [Mustela putorius furo]

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 122/225 (54%), Positives = 170/225 (75%)

Query: 89  GGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAF 148
           G   + AYDP ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF
Sbjct: 106 GAPLEGAYDPADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAF 165

Query: 149 IKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK 208
           +KV RPDG+PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN 
Sbjct: 166 LKVPRPDGKPDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNVTQHMKVKSLEDAEKNP 225

Query: 209 KAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDL 268
           KAID WI+ I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L
Sbjct: 226 KAIDTWIESISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSL 285

Query: 269 TTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPG 313
             YID++ AILDIP ++SRI++LH++FSLY+  ++S +  A   G
Sbjct: 286 AEYIDMICAILDIPVYKSRIQSLHLLFSLYSEFKNSQHFKALAEG 330

Source: Mustela putorius furo

Species: Mustela putorius

Genus: Mustela

Family: Mustelidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260841216|ref|XP_002613824.1| hypothetical protein BRAFLDRAFT_168499 [Branchiostoma floridae] gi|229299214|gb|EEN69833.1| hypothetical protein BRAFLDRAFT_168499 [Branchiostoma floridae]

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/219 (55%), Positives = 169/219 (77%), Gaps = 1/219 (0%)

Query: 88  EGGGADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDA 147
           E    + AYDP ++ HLA + ++K++F YI +YTPQ I+L +KL+PFIPD+IPAVGDIDA
Sbjct: 21  EHAQVEGAYDPADYDHLAVTPEIKDLFQYITRYTPQSIELEHKLKPFIPDFIPAVGDIDA 80

Query: 148 FIKVARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKN 207
           F+KV RPD +P  LGLTVLDEPC +QSDP +L+LQLR  SK  T++KA  +  V  ADKN
Sbjct: 81  FVKVGRPDSKPSPLGLTVLDEPCAKQSDPTVLDLQLRAISKQ-TTTKAMQVSSVAQADKN 139

Query: 208 KKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCD 267
            KAI+ WI  I +LH++KPPP+VHY++ MPD++ LMQEW  + E  ++ VGLP  DLDCD
Sbjct: 140 PKAIENWIDSISELHRSKPPPNVHYTKNMPDIEQLMQEWPPEFEDLLNRVGLPTADLDCD 199

Query: 268 LTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSN 306
           L TYIDL+ +ILDIP +++R+++LH++F+LY+  ++S +
Sbjct: 200 LPTYIDLICSILDIPVYKNRLQSLHILFTLYSEFKNSQH 238

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198430260|ref|XP_002128036.1| PREDICTED: similar to Ift46 protein [Ciona intestinalis]

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 121/236 (51%), Positives = 173/236 (73%), Gaps = 1/236 (0%)

Query: 91  GADKAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIK 150
           G + AYDP ++ HL  S ++KE+F YI +YTPQ I+L +KL+PF PD+IPAVGDIDAF+K
Sbjct: 125 GLEGAYDPADYEHLTVSQEIKELFQYITRYTPQSIELEHKLKPFNPDFIPAVGDIDAFLK 184

Query: 151 VARPDGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKA 210
           V RPD +P +LGLTVLDEPC +QSDP +L+LQLR  SK  +  +A  ++ V+DAD+N KA
Sbjct: 185 VPRPDNKPVTLGLTVLDEPCAKQSDPTVLDLQLRSISKT-SGVRAMQVRSVKDADRNPKA 243

Query: 211 IDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTT 270
           ID W++ + DLH++KPPP+VHYS+ MP++D+LMQEW  +VE+ + ++ LP   LDCDL  
Sbjct: 244 IDTWVESMADLHRSKPPPNVHYSKSMPEIDHLMQEWPREVEELLQKISLPTAQLDCDLPK 303

Query: 271 YIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQNAAYPGSGNNGGGTPMRLN 326
           Y D++ ++LDIP +++RI++LHV+FSLY+A +   +         +   G P  LN
Sbjct: 304 YCDIICSLLDIPVYKNRIQSLHVLFSLYSAFKQMQHFQTDNVQEDDQNQGEPEVLN 359

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
UNIPROTKB|E2R0U7	301	IFT46 "Uncharacterized protein	0.616	0.667	0.572	4.7e-64
UNIPROTKB|Q9NQC8	304	IFT46 "Intraflagellar transpor	0.616	0.661	0.572	7.6e-64
UNIPROTKB|Q1LZB4	301	IFT46 "Intraflagellar transpor	0.616	0.667	0.572	9.7e-64
MGI|MGI:1923818	301	Ift46 "intraflagellar transpor	0.616	0.667	0.572	1.6e-63
RGD|1307682	301	Ift46 "intraflagellar transpor	0.616	0.667	0.572	1.6e-63
ZFIN|ZDB-GENE-080102-3	384	ift46 "intraflagellar transpor	0.613	0.520	0.547	8.8e-63
UNIPROTKB|I3LJ92	300	IFT46 "Uncharacterized protein	0.616	0.67	0.567	3.8e-62
UNIPROTKB|F1NMX8	273	IFT46 "Uncharacterized protein	0.610	0.728	0.547	2.4e-60
UNIPROTKB|E9PR06	297	IFT46 "Intraflagellar transpor	0.552	0.606	0.561	1.4e-55
UNIPROTKB|A2T2X4	344	IFT46 "Intraflagellar transpor	0.610	0.578	0.495	3.5e-52

UNIPROTKB|E2R0U7 IFT46 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/201 (57%), Positives = 159/201 (79%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL+ S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    63 PADYEHLSVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 122

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   123 PDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 182

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   183 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICA 242

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   243 ILDIPIYKSRIQSLHLLFSLY 263

GO:0042073 "intraflagellar transport" evidence=IEA

UNIPROTKB|Q9NQC8 IFT46 "Intraflagellar transport protein 46 homolog" [Homo sapiens (taxid:9606)]

 Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
 Identities = 115/201 (57%), Positives = 158/201 (78%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    66 PADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 125

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   126 PDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 185

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   186 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICA 245

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   246 ILDIPVYKSRIQSLHLLFSLY 266

GO:0031512 "motile primary cilium" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=NAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009296 "flagellum assembly" evidence=ISS

GO:0042073 "intraflagellar transport" evidence=ISS

GO:0050821 "protein stabilization" evidence=ISS

GO:0008022 "protein C-terminus binding" evidence=ISS

GO:0005932 "microtubule basal body" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q1LZB4 IFT46 "Intraflagellar transport protein 46 homolog" [Bos taurus (taxid:9913)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 115/201 (57%), Positives = 158/201 (78%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    63 PADYEHLPVSAEVKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 122

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   123 PDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 182

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   183 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICA 242

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   243 ILDIPVYKSRIQSLHLLFSLY 263

GO:0005932 "microtubule basal body" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0031512 "motile primary cilium" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0042073 "intraflagellar transport" evidence=IEA

MGI|MGI:1923818 Ift46 "intraflagellar transport 46" [Mus musculus (taxid:10090)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 115/201 (57%), Positives = 157/201 (78%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    63 PADYEHLPVSAEIKELFEYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 122

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   123 PDHLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 182

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   183 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTVEIDCSLAEYIDMICA 242

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   243 ILDIPFYKSRIQSLHLLFSLY 263

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005932 "microtubule basal body" evidence=ISO

GO:0015031 "protein transport" evidence=ISO

GO:0030092 "regulation of flagellum assembly" evidence=ISO

GO:0031512 "motile primary cilium" evidence=IDA

GO:0031514 "motile cilium" evidence=ISO

GO:0031647 "regulation of protein stability" evidence=ISO

GO:0042073 "intraflagellar transport" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0043064 "flagellum organization" evidence=ISO

GO:0043234 "protein complex" evidence=IDA

GO:0060170 "cilium membrane" evidence=ISO

GO:0060286 "flagellar cell motility" evidence=ISO

RGD|1307682 Ift46 "intraflagellar transport 46 homolog (Chlamydomonas)" [Rattus norvegicus (taxid:10116)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 115/201 (57%), Positives = 157/201 (78%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    63 PADYEHLPVSAEIKELFEYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 122

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   123 PDHLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 182

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   183 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTVEIDCSLAEYIDMICA 242

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   243 ILDIPFYKSRIQSLHLLFSLY 263

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005932 "microtubule basal body" evidence=IEA

GO:0031512 "motile primary cilium" evidence=IEA;ISO

GO:0042073 "intraflagellar transport" evidence=IEA

GO:0043234 "protein complex" evidence=IEA;ISO

ZFIN|ZDB-GENE-080102-3 ift46 "intraflagellar transport protein 46" [Danio rerio (taxid:7955)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 110/201 (54%), Positives = 158/201 (78%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  + ++KE+F YI +YTPQ I+L +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:   148 PADYEHLPVTGEIKELFQYITRYTPQTIELDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 207

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEPC +QSDP +L+L L ++SK    ++  + K +E+ +KN KAID WI+ 
Sbjct:   208 PDNLGLLVLDEPCTKQSDPTVLSLWLSENSKQHNVTEVKV-KSIENPEKNPKAIDNWIES 266

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D+LMQEW ++ E+ + +V LP  D+DCDL  Y+D++  
Sbjct:   267 ISELHRSKPPATVHYTRPMPDIDSLMQEWPSEFEELLGKVNLPTADIDCDLAEYVDMICG 326

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP +++RI +LHV+F+LY
Sbjct:   327 ILDIPVYKNRIHSLHVLFTLY 347

GO:0042073 "intraflagellar transport" evidence=IEA

GO:0048264 "determination of ventral identity" evidence=IMP

GO:0005856 "cytoskeleton" evidence=IEA

GO:0042995 "cell projection" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005932 "microtubule basal body" evidence=IEA

UNIPROTKB|I3LJ92 IFT46 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 114/201 (56%), Positives = 156/201 (77%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:    63 PADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 122

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   123 PDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNVTQHMKVKSLEDAEKNPKAIDTWIES 182

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++K P +VHY+R MPD+D LMQEWS ++   I +V LP  ++DC L  YID++ A
Sbjct:   183 ISELHRSKAPATVHYTRPMPDIDTLMQEWSPEITIIIRKVSLPTAEIDCSLEGYIDMICA 242

Query:   278 ILDIPRFESRIETLHVIFSLY 298
             ILDIP ++SRI++LH++FSLY
Sbjct:   243 ILDIPIYKSRIQSLHLLFSLY 263

GO:0043234 "protein complex" evidence=IEA

GO:0031512 "motile primary cilium" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0042073 "intraflagellar transport" evidence=IEA

UNIPROTKB|F1NMX8 IFT46 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 109/199 (54%), Positives = 156/199 (78%)

Query:   100 EFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPD 159
             ++ +L  S ++KE+F YI +YTP+ I++ +KL+PFIPD+IPAVGDIDAF+KV RPDG+PD
Sbjct:    37 DYDYLPVSPEIKELFEYIRRYTPKTIEIEHKLQPFIPDFIPAVGDIDAFLKVPRPDGKPD 96

Query:   160 SLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIG 219
             +LGL VLDEP  +QSDP +L+L L ++SK    ++   +K VE+A++N KAID WI+ I 
Sbjct:    97 NLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQQIKVKSVENAERNPKAIDSWIESIS 156

Query:   220 DLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAIL 279
             +LH+ KPP +VHYSR MPD++ LMQEWS + E+ + +VGLP  +++CDL  Y+D++ AIL
Sbjct:   157 ELHRCKPPATVHYSRPMPDIETLMQEWSPEFEELLGKVGLPTAEMNCDLAEYVDMICAIL 216

Query:   280 DIPRFESRIETLHVIFSLY 298
             DIP ++S I+ LHV+FSLY
Sbjct:   217 DIPVYKSWIQPLHVLFSLY 235

GO:0042073 "intraflagellar transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0031512 "motile primary cilium" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

UNIPROTKB|E9PR06 IFT46 "Intraflagellar transport protein 46 homolog" [Homo sapiens (taxid:9606)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 101/180 (56%), Positives = 138/180 (76%)

Query:    98 PLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGR 157
             P ++ HL  S ++KE+F YI +YTPQ IDL +KL+PFIPD+IPAVGDIDAF+KV RPDG+
Sbjct:   117 PADYEHLPVSAEIKELFQYISRYTPQLIDLDHKLKPFIPDFIPAVGDIDAFLKVPRPDGK 176

Query:   158 PDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKD 217
             PD+LGL VLDEP  +QSDP +L+L L ++SK    ++   +K +EDA+KN KAID WI+ 
Sbjct:   177 PDNLGLLVLDEPSTKQSDPTVLSLWLTENSKQHNITQHMKVKSLEDAEKNPKAIDTWIES 236

Query:   218 IGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAA 277
             I +LH++KPP +VHY+R MPD+D LMQEWS + E+ + +V LP  ++DC L  YID++ A
Sbjct:   237 ISELHRSKPPATVHYTRPMPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICA 296

GO:0042073 "intraflagellar transport" evidence=IEA

UNIPROTKB|A2T2X4 IFT46 "Intraflagellar transport protein 46" [Chlamydomonas reinhardtii (taxid:3055)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 99/200 (49%), Positives = 142/200 (71%)

Query:   100 EFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPD 159
             E+ HL    D++E+F+YI +Y PQ ++L  +++PFIPDYIPAVG ID FIKV RPD +PD
Sbjct:   106 EYKHLNVGEDVRELFSYIGRYKPQTVELDTRIKPFIPDYIPAVGGIDEFIKVPRPDTKPD 165

Query:   160 SLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNK-KAIDRWIKDI 218
              LGL VLDEP  +QSDP +L LQLRQ SK    +KA ++ ++E  D+NK K I +WI  I
Sbjct:   166 YLGLKVLDEPAAKQSDPTVLTLQLRQLSKEAPGAKADMVGRLEHTDENKAKKIQQWIASI 225

Query:   219 GDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDLMAAI 278
              D+HK KP  +V+YS+ MP+++ LMQEW  +VE  +  + +P  D++ D+ TY  L+  +
Sbjct:   226 NDIHKAKPAATVNYSKRMPEIEALMQEWPPEVETFLKTMHMPSGDVELDIKTYARLVCTL 285

Query:   279 LDIPRFESRIETLHVIFSLY 298
             LDIP ++  +E+LHV+F+LY
Sbjct:   286 LDIPVYDDPVESLHVLFTLY 305

GO:0005515 "protein binding" evidence=IPI

GO:0005932 "microtubule basal body" evidence=IDA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0009296 "flagellum assembly" evidence=IMP

GO:0015031 "protein transport" evidence=IMP

GO:0030092 "regulation of flagellum assembly" evidence=IMP

GO:0030992 "intraflagellar transport particle B" evidence=IC;TAS

GO:0031514 "motile cilium" evidence=IDA

GO:0031647 "regulation of protein stability" evidence=IMP

GO:0042073 "intraflagellar transport" evidence=IC;IDA

GO:0043064 "flagellum organization" evidence=IMP

GO:0050821 "protein stabilization" evidence=IDA

GO:0060170 "cilium membrane" evidence=IDA

GO:0060286 "flagellar cell motility" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6AXQ9	IFT46_RAT	No assigned EC number	0.5422	0.6901	0.7475	yes	N/A
Q9DB07	IFT46_MOUSE	No assigned EC number	0.5422	0.6901	0.7475	yes	N/A
Q1LZB4	IFT46_BOVIN	No assigned EC number	0.5422	0.6901	0.7475	yes	N/A
A7MBP4	IFT46_DANRE	No assigned EC number	0.52	0.6871	0.5833	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	326
pfam12317	214	pfam12317, IFT46_B_C, Intraflagellar transport com	1e-105

>gnl|CDD|204879 pfam12317, IFT46_B_C, Intraflagellar transport complex B protein 46 C terminal

 Score =  307 bits (788), Expect = e-105
 Identities = 121/210 (57%), Positives = 165/210 (78%)

Query: 95  AYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARP 154
           AYDP ++AHL  + ++KE+F YI +Y PQ ++L  KL+PFIPDYIPAVGDIDAFIKV RP
Sbjct: 2   AYDPADYAHLDVTPEIKELFQYITRYKPQTVELPTKLKPFIPDYIPAVGDIDAFIKVPRP 61

Query: 155 DGRPDSLGLTVLDEPCFEQSDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRW 214
           DG+PD+LGLTVLDEPC  QSDP +L+LQLR++SK  T  K  ++  +EDA+KN KAID W
Sbjct: 62  DGKPDNLGLTVLDEPCANQSDPTVLDLQLRETSKVATGGKDVVVGSIEDAEKNPKAIDTW 121

Query: 215 IKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQTISEVGLPPEDLDCDLTTYIDL 274
           I+ I +LH++KPPP+VHYS+ MPD++ LMQEW  + E+ ++ V LP  DLD DL  Y+ +
Sbjct: 122 IESIKELHRDKPPPTVHYSKNMPDIETLMQEWPQEFEEVLNSVQLPSADLDLDLKEYVKI 181

Query: 275 MAAILDIPRFESRIETLHVIFSLYAAIQSS 304
           + AILDIP + +RIE+LHV+F+LY+  +++
Sbjct: 182 ICAILDIPVYGNRIESLHVLFTLYSEFKNN 211

This family of proteins is found in eukaryotes. Proteins in this family are typically between 298 and 416 amino acids in length. IFT46 is a flagellar protein of complex B. Like all IFT proteins, it is required for transport of IFT particles into the flagella. Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
PF12317	214	IFT46_B_C: Intraflagellar transport complex B prot	100.0

>PF12317 IFT46_B_C: Intraflagellar transport complex B protein 46 C terminal; InterPro: IPR022088 This entry represents proteins is found in eukaryotes

Probab=100.00  E-value=4.4e-114  Score=783.83  Aligned_cols=214  Identities=58%  Similarity=1.070  Sum_probs=212.5

Q ss_pred             CCCCcccccCCCCCHHHHHHHHHhhhcCCCccCCCCccccCCCCcccccCCcccceeeeCCCCCCcccCCeeecCCCCCC
Q psy17744         94 KAYDPLEFAHLATSTDLKEMFAYIEKYTPQPIDLTYKLRPFIPDYIPAVGDIDAFIKVARPDGRPDSLGLTVLDEPCFEQ  173 (326)
Q Consensus        94 g~Y~P~~y~~L~vs~EiKeLF~yI~rYtPq~ieL~~kLkPFIPDyIPAVGDIDaFiKVpRPDg~~d~LGL~vLDEP~~~Q  173 (326)
                      |+|||++|+||+||+||||||+||+|||||+|+|++|||||||||||||||||||||||||||++|+|||+||||||++|
T Consensus         1 g~y~P~~y~~l~v~~EikeLF~yI~~YtPq~iel~~kLkPFiPdyiPAVGdiDaFiKVpRPD~~~d~LGL~vLDEP~~~Q   80 (214)
T PF12317_consen    1 GAYDPADYEHLPVSAEIKELFQYITRYTPQEIELDTKLKPFIPDYIPAVGDIDAFIKVPRPDGKPDNLGLTVLDEPSANQ   80 (214)
T ss_pred             CCCChhhhccCCCCHHHHHHHHHHhhcCCccccCCCcccccCccccccccCcccceeccCCCCCccccCCEEecCCCccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceeeEEeeccccCCCCCCcccceeeecchhhcHHHHHHHHHHHHHHhhCCCCCceeecCCCCChHHHHHhhhHHHHHH
Q psy17744        174 SDPAILNLQLRQSSKCPTSSKATIIKKVEDADKNKKAIDRWIKDIGDLHKNKPPPSVHYSRGMPDLDNLMQEWSNDVEQT  253 (326)
Q Consensus       174 SDptvL~LqLR~~~k~~~~~~~~~Vksie~aeknpk~Id~WI~sI~eLHrsKPp~tV~Ys~~MPDId~LMQeWP~e~Ee~  253 (326)
                      |||+||+||||+.+|+++..++++|+|||+|+||||+||+||++|+||||+||++||||+++|||||+||||||++||++
T Consensus        81 Sdp~vl~lqLr~~~~~~~~~~~~~v~sie~ae~n~k~Id~WI~~i~elHr~kp~~tV~Y~~~mPdId~LMqeWP~e~Ee~  160 (214)
T PF12317_consen   81 SDPTVLDLQLRSISKQANGDKDVPVKSIENAEKNPKEIDKWIESIEELHRSKPPPTVHYSKPMPDIDTLMQEWPPEFEEL  160 (214)
T ss_pred             CCCceEEEeeecccccccccccceecchhchhhCHHHHHHHHHHHHHHHhcCCCCceecCCCCCCHHHHHHHCcHHHHHH
Confidence            99999999999999998888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCChhhHHHHHHHHHHHHhhCcch
Q psy17744        254 ISEVGLPPEDLDCDLTTYIDLMAAILDIPRFESRIETLHVIFSLYAAIQSSSNQ  307 (326)
Q Consensus       254 L~~~~lP~a~lD~~L~eYvdiiC~iLDIPV~~s~IeSLHvLFsLY~efknsqhF  307 (326)
                      |++++||+|++||||++||||||++||||||+|||||||||||||+||||||||
T Consensus       161 L~~~~lP~a~lD~~L~~Yv~iiC~ilDIPv~~~~IeSLH~LFsLy~efk~~qhF  214 (214)
T PF12317_consen  161 LKKVGLPTAELDCSLEEYVDIICAILDIPVYKSRIESLHVLFSLYLEFKNSQHF  214 (214)
T ss_pred             HhhcCCCccccCCCHHHHHHHHHHHhCCccCccHHHHHHHHHHHHHHHhhccCC
Confidence            999999999999999999999999999999999999999999999999999999

Proteins are typically between 298 and 416 amino acids in length. It is thought to be a flagellar protein of complex B and like all IFT proteins, it is required for transport of IFT particles into the flagella [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	326
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 5/34 (14%)

Query: 118 EKYTPQPID-LTYKLRPFIPDYIPAVGDIDAFIK 150
           EK   Q +  L   L+ +  D  PA+  I A ++
Sbjct: 18  EK---QALKKLQASLKLYADDSAPALA-IKATME 47

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00