Psyllid ID: psy177

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------61
Protein Sequence
MDKNTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRYLLSNDSTQSDTPVESSKASDVESDEDVEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQSDTPVESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHccccccccccHHHHHHHHHcHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHccccccccccccccccHHHHHccccccccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccccEEEEEEccccHHHHHHcccHHHHcccEEEEEEEcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHcccHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccHHccccccccccccccccccEEEEEccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHccHHHHHHcccEEEEccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEccccccHccHHcccHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHcccHHHHHHHHHcccHHHHccHHccccccccccccccHHHHHHHHHHHHcccEEHHHHHHHHcc
Coil and Loop (DISEMBL)
MDKNTVLMEVLEARamdltptrdittvdtiapAIMDREAAMGRYLlsndstqsdtpvesskasdvesdeDVEVNLKKTHHDFLNFQDYYneigckdkliivtqsdtpvesskasdvesdeDVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQdyesfpcsILNEFLLILHEYLVTLPFILILgvstspsiihstlnydvistmkihtfynqpsieslnlitdniilnnkfplILHHTILEFLidnflfydfSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKkldsngvvKYSIELFEFITNMYSSLQCLFALVydlpnnplgkqlRDIYCIVLSekvfvesstFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIkhkndisklnltpKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRnyftpiqnmplheivlfSDCHLLKKYLAGAPRAAIhtalnnpnyymqcdcckvndpsemlpsmpdvSLAYKLHLESATMINIHDWLQSFAT
Flexible Loop (DISEMBL)
MDKNTVLMEVLEaramdltptrdittvdtiaPAIMDREAAMGRYLLsndstqsdtpvesskasdvesdEDVEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQSdtpvesskasdvesdedVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSikkldsngvVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKnadtevqikhkndisklnltpKSRAQLKQNLLESIKQDKLQFEFDIkrekfsikqdklqfefdIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Low Complexity Region (SEG)
MDKNTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRYLLSNDSTQSDTPVESSKASDVESDEDVEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQSDTPVESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESlnlitdniilnnKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Disordered region (IsUnstruct)
********EVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRY*****************************NLKKTHHDFLNFQDYYNEIGCKDKLIIVT*********************VNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKL***************************************IKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQ****
Disordered Region (DISOPRED)
***NTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAA***************************************HDFLNFQDY*****************************************HYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAK*************YSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQ***********ELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIK*************************************************************FDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQ*****************DVSLAYKLHLESATMINIHDWLQSFAT
Disordered Region (DISEMBL)
MDKNTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRYLLSN**********************VEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQS*****************VEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Disordered Region (DISPRO)
***NTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRYLLSNDSTQ*D*PVESSKASDVESDEDVEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQSD*********************KKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKR*KFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDKNTVLMEVLEARAMDLTPTRDITTVDTIAPAIMDREAAMGRYLLSNDSTQSDTPVESSKASDVESDEDVEVNLKKTHHDFLNFQDYYNEIGCKDKLIIVTQSDTPVESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	608	2.2.26 [Sep-21-2011]
Q32PJ3	712	Origin recognition comple	yes	N/A	0.753	0.643	0.310	1e-59
Q9UBD5	711	Origin recognition comple	yes	N/A	0.751	0.642	0.299	7e-59
Q5DJU3	713	Origin recognition comple	N/A	N/A	0.699	0.596	0.312	2e-57
Q4R180	711	Origin recognition comple	yes	N/A	0.735	0.628	0.289	4e-56
Q9JK30	715	Origin recognition comple	yes	N/A	0.731	0.622	0.284	4e-54
Q10067	690	Origin recognition comple	yes	N/A	0.131	0.115	0.3	7e-07
Q55BR6	1080	Origin recognition comple	yes	N/A	0.222	0.125	0.242	4e-05

>sp|Q32PJ3|ORC3_BOVIN Origin recognition complex subunit 3 OS=Bos taurus GN=ORC3 PE=2 SV=1

 Score =  231 bits (590), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 264/531 (49%), Gaps = 73/531 (13%)

Query: 115 DVESDE--DVEVNLKKTHYDFLNFQDYYNEIGCKD------------------KLIIALQ 154
           DV+S E   V+V  K  HY   +   +Y  +  K                    +++ L+
Sbjct: 161 DVQSKEKESVQVIQKNVHYSMDSLSAWYMSVTQKTDPKMPRKKRTSSSQWQSPPVVLILK 220

Query: 155 DYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQP 214
           D ESF   +L +F++I  ++L   P ILI G++TSP +IH  L + V S + I  F +  
Sbjct: 221 DMESFTTKVLQDFIIISSQHLHEFPLILIFGIATSPVVIHRLLPHAVSSLLCIELFQSLS 280

Query: 215 SIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNN 274
             E L  + D ++L  +FP  L   +L+ L + FL++DFS+  F+KG+++ +L+H     
Sbjct: 281 CKEHLTTVLDKLLLTTQFPFKLSEKVLQILTNIFLYHDFSIQNFIKGLQLSLLEHFYSQP 340

Query: 275 INALCYNIMNQTLTKQMINANMLNEIKELDS----VAKLSIKK----LDSNGVVKYSIE- 325
           ++ LC N+       + ++AN    I+ L S    V K S +K    L S+  +K   + 
Sbjct: 341 LSVLCCNLPEAKRRIRFLSANQCENIRRLPSFRRYVEKQSSEKQVALLTSDKFLKEETQS 400

Query: 326 ----LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQL 381
               L  +  N +  L+CL      LP  PLG+Q+R++YC+ L EK   +S  +   LQL
Sbjct: 401 LLENLHVYHKNYFLVLRCLHQFTSSLPKYPLGRQIRELYCMCL-EKSIWDSEEYASVLQL 459

Query: 382 IQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIK 438
           ++ ++K EL   L+ C +L Q  S +EL    K I   L Q ++L    EE    Q + K
Sbjct: 460 LRLLAKDELMAMLQNCFKLFQSSSGKELGNTAKRIEEFLAQFQSLDETKEEEDTSQSQSK 519

Query: 439 NADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQF 498
                     K D+  L    KS  ++K+    S +Q K                     
Sbjct: 520 GL-------QKTDLYHLQ---KSLLEMKELRSTSKRQTK--------------------- 548

Query: 499 EFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNN 558
            F++ RE+ V + + +L R Y  P    PLHE + FS  H L+++L  APR A+HTALNN
Sbjct: 549 -FEVLREQVVSF-VDSLVREYLLPPDTQPLHETLYFSSAHTLRQHLNAAPRIALHTALNN 606

Query: 559 PNYYMQCDCCKVNDPSEMLPSM-PDVSLAYKLHLESATMINIHDWLQSFAT 608
           P YY++ +  +  +    +P++ PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct: 607 PYYYLKNEALRSEEGC--IPNVAPDICIAYKLHLECSRLINLVDWSEAFAT 655

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
Bos taurus (taxid: 9913)

>sp|Q9UBD5|ORC3_HUMAN Origin recognition complex subunit 3 OS=Homo sapiens GN=ORC3 PE=1 SV=1

 Score =  228 bits (582), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 259/531 (48%), Gaps = 74/531 (13%)

Query: 115 DVES--DEDVEVNLKKTHYDFLNFQDYYNEIGCKD------------------KLIIALQ 154
           D++S  +E V V  +KTHY   +   +Y  +  K                    +++ L+
Sbjct: 161 DIKSKEEESVHVTQRKTHYSMDSLSSWYMTVTQKTDPKMLSKKRTTSSQWQSPPVVVILK 220

Query: 155 DYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQP 214
           D ESF   +L +F++I  ++L   P ILI G++TSP IIH  L + V S + I  F +  
Sbjct: 221 DMESFATKVLQDFIIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIELFQSLS 280

Query: 215 SIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNN 274
             E L  + D ++L  +FP  ++  +L+ L + FL++DFS+  F+KG+++ +L+H     
Sbjct: 281 CKEHLTTVLDKLLLTTQFPFKINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLEHFYSQP 340

Query: 275 INALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIE--------- 325
           ++ LC N+         ++ N    I+ L S  +   K+     V   + E         
Sbjct: 341 LSVLCCNLPEAKRRINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYLKEETQL 400

Query: 326 ----LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQL 381
               L  +  N +  L+CL      LP  PLG+Q+R++YC  L EK   +S  +   LQL
Sbjct: 401 LLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTCL-EKNIWDSEEYASVLQL 459

Query: 382 IQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIK 438
           ++ ++K EL   LEKC ++ +   +  L    K I   L Q ++L    EE      + K
Sbjct: 460 LRMLAKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDETKEEEDASGSQPK 519

Query: 439 NADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQF 498
                     K D+  L    KS  ++K+                       +++ K Q 
Sbjct: 520 GL-------QKTDLYHLQ---KSLLEMKE-----------------------LRRSKKQT 546

Query: 499 EFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNN 558
           +F++ RE  V + I  L R Y  P +  PLHE+V FS  H L+++L  APR A+HTALNN
Sbjct: 547 KFEVLRENVVNF-IDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALHTALNN 605

Query: 559 PNYYMQCDCCKVNDPSEMLPSM-PDVSLAYKLHLESATMINIHDWLQSFAT 608
           P YY++ +  K  +    +P++ PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct: 606 PYYYLKNEALKSEEGC--IPNIAPDICIAYKLHLECSRLINLVDWSEAFAT 654

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Homo sapiens (taxid: 9606)

>sp|Q5DJU3|ORC3_SPECI Origin recognition complex subunit 3 OS=Spermophilus citellus GN=ORC3 PE=2 SV=1

 Score =  224 bits (570), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 253/477 (53%), Gaps = 52/477 (10%)

Query: 149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
           +++ L+D ESF   IL +F++I  ++L   P ILI G++TSP IIH  L + V S + I 
Sbjct: 215 VVLILKDMESFTTKILQDFIIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIE 274

Query: 209 TFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
            F + P  E L  + D ++L  +FP  +   +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct: 275 LFQSLPCKEHLTTVLDKLLLTAQFPFKISEKVLQILTNIFLYHDFSIQNFVKGLQLSLLE 334

Query: 269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELF- 327
           H     ++ LC ++         ++A+    I+ L S  +   K++    V   + E F 
Sbjct: 335 HFYSQPLSVLCCSLPEAKRRINFLSAHQCENIRRLPSFRRYVEKQVSEKQVALLTNERFL 394

Query: 328 ------------EFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
                        + TN +  L+CL      LP  PLG+Q+R++YC  L EK   +S  +
Sbjct: 395 KEETQSLLENLHVYHTNYFLVLRCLHNFTSSLPKYPLGRQIRELYCTCL-EKNIWDSEEY 453

Query: 376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
              LQL++ +++ +L   L+KC ++ +  S+++L    K I   L Q ++L         
Sbjct: 454 ASALQLLRMLARDDLMTILQKCFKVFKSSSEKQLGSTAKRIEEFLAQFQSL--------- 504

Query: 433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIK 492
                 +AD     K + D S     PK    L++  L  +++  L+ + +++R      
Sbjct: 505 ------DADA----KEEEDAS--GSQPKG---LQKTDLYHLQKSLLEMK-ELRR------ 542

Query: 493 QDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAI 552
             K Q  F++ REK V + I  L R Y  P +  PLHE+V FS  H L+++L  APR A+
Sbjct: 543 TSKKQTRFEVLREKVVNF-IDCLVREYLLPPETQPLHEVVYFSAAHTLREHLNAAPRIAL 601

Query: 553 HTALNNPNYYMQCDCCKVNDPSEMLPSM-PDVSLAYKLHLESATMINIHDWLQSFAT 608
           HTALN+P +Y++ +  K  +    +P++ PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct: 602 HTALNDPYFYIKNEALKSEEGC--IPNIAPDICIAYKLHLECSRLINLVDWSEAFAT 656

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Spermophilus citellus (taxid: 9997)

>sp|Q4R180|ORC3_RAT Origin recognition complex subunit 3 OS=Rattus norvegicus GN=Orc3 PE=2 SV=1

 Score =  219 bits (559), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 263/518 (50%), Gaps = 71/518 (13%)

Query: 126 LKKTHYDFLNFQDYYNEIGCKDK------------------LIIALQDYESFPCSILNEF 167
           L++T Y   +   +Y+ +  K                    +++ L++ ESF   +L +F
Sbjct: 173 LRRTSYSMDSLSSWYSTVAQKTGPKMTSKKRATCSQWQSPPVVLILKNMESFSTKVLQDF 232

Query: 168 LLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNII 227
           ++I  ++L   P ILI G++TSP IIH  L + V S + I  F +    E L ++ D ++
Sbjct: 233 IIISSQHLHEFPLILIFGIATSPVIIHRLLPHSVSSLLCIELFQSLSCKEHLTVVLDKLL 292

Query: 228 LNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTL 287
           L  +FP  L    L+ L + FL++DFS+  F+KG+K+ +L+H     ++ LC ++     
Sbjct: 293 LTPQFPFKLSKKALQVLTNIFLYHDFSIQNFIKGLKLSLLEHFYSQPLSVLCCDLSEAKK 352

Query: 288 TKQMINANMLNEIKELDSVAKL--------SIKKLDSNGVVKYSIE-----LFEFITNMY 334
              + + N   +I+ L S  +          +  L +   +K   +     L  +  N +
Sbjct: 353 RINVFSVNQCEKIRRLPSFRRYVENQPLEKQVALLTNETFLKEETQSLLEDLHVYHINYF 412

Query: 335 SSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQEL---L 391
             L+CL      LP  PLG+Q+R++YC  L +K++ +S  ++  LQL++ ++K EL   L
Sbjct: 413 LVLRCLHNFTSSLPKYPLGRQIRELYCTCLEKKIW-DSEEYESALQLLRMLAKDELMGIL 471

Query: 392 EKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKND 451
           E+C++++   ++++L    + I   L Q +NL    EE      + K          K D
Sbjct: 472 EQCVKVLNSSTEKQLSNTAQKIKGFLTQFQNLDDSKEEEDACGSQPKGL-------QKTD 524

Query: 452 ISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYL 511
           +            L+++LLE            +K  + + K+     +F++ RE  + + 
Sbjct: 525 L----------YHLQKSLLE------------MKELRRTTKKPT---KFEMLRENVINF- 558

Query: 512 IKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVN 571
           I NL R+Y  P +  PLHE+V FS  + L+++L  APR A+HTALNNP YY++ +  K  
Sbjct: 559 IDNLVRDYLLPPEGQPLHEVVYFSAANTLREHLNAAPRIALHTALNNPYYYLKNEALKSE 618

Query: 572 DPSEMLPSM-PDVSLAYKLHLESATMINIHDWLQSFAT 608
           +    +PS+ PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct: 619 EGC--IPSVAPDICIAYKLHLECSRLINLVDWSEAFAT 654

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Rattus norvegicus (taxid: 10116)

>sp|Q9JK30|ORC3_MOUSE Origin recognition complex subunit 3 OS=Mus musculus GN=Orc3 PE=1 SV=1

 Score =  213 bits (542), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 262/517 (50%), Gaps = 72/517 (13%)

Query: 126 LKKTHYDFLNFQDYYNEIGCK------------------DKLIIALQDYESFPCSILNEF 167
           LKKT+Y   +   +Y+ +  K                    +++ L+  ESF   +L +F
Sbjct: 180 LKKTNYSMDSLCSWYSAVTQKADHKVTIKKRTASGHWRSPPVVLILKSMESFTSKVLQDF 239

Query: 168 LLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNII 227
           + I  ++L   P ILI G++TSP IIH  L + V S + +  F +    + L ++ D ++
Sbjct: 240 ITISSQHLHEFPLILIFGIATSPVIIHRLLPHSVSSLLCVELFQSLSCEQHLTVVLDKLL 299

Query: 228 LNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTL 287
           L  +FP  L    L+ L + FL++DFS+ +F+KG+K+ +L+H     ++ LC ++     
Sbjct: 300 LTPQFPFKLSKKALQVLTNIFLYHDFSIQSFIKGIKLSLLEHFYSQPLSVLCCDLSEAKK 359

Query: 288 TKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELF-------------EFITNMY 334
              + + +    I+ L S  +    +     V   + E F              +  N +
Sbjct: 360 RVNVFSVSQCENIRRLPSFRRYVENQPLGKQVALLTNETFLKEKTQSLLEDLHVYHINYF 419

Query: 335 SSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQEL---L 391
             L+CL      LP  PLG+Q+R++YC  L +K++ +S  +K  LQL++ ++K EL   L
Sbjct: 420 LVLRCLHNFTSSLPKYPLGRQIRELYCTCLEKKIW-DSEEYKSALQLLRMLAKDELVSIL 478

Query: 392 EKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKND 451
           ++C++++   ++++L    + I   L Q +NL               +AD+      K +
Sbjct: 479 QRCIEVLDSSTEKQLGNTTQKIKDFLTQFQNL---------------DADS------KEE 517

Query: 452 ISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYL 511
                  PK    L++  L  +++  L+ + +++R K   K       F++ RE  + + 
Sbjct: 518 EDACGSQPKG---LQKTDLYHLQKSLLEMK-ELRRTKKPTK-------FEMLRENVMNF- 565

Query: 512 IKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVN 571
           I NL R+Y  P ++ PLHE+V FS  + L+++L  APR A+HTALNNP YY++ +  +  
Sbjct: 566 IDNLVRDYLLPPESQPLHEVVYFSAANTLREHLNAAPRIALHTALNNPYYYLKNEELEGC 625

Query: 572 DPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
            P+    + PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct: 626 IPN----TAPDICIAYKLHLECSLLINLVDWAEAFAT 658

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Mus musculus (taxid: 10090)

>sp|Q10067|ORC3_SCHPO Origin recognition complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc3 PE=1 SV=2

 Score = 56.2 bits (134), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 10/90 (11%)

Query: 527 PLHEIVLFSDCHLLKKYLA-GAPRAAIHTALNNPNYYMQCDCCKVN--------DPSEML 577
           P +E++ +  C  L +  A G  R+ IH++  +P YY+  D  K++        D  +++
Sbjct: 524 PFYEVLFYDYCRPLNQAFASGHQRSVIHSSCMDPEYYVG-DEKKIDSEFSNAEKDGKDLI 582

Query: 578 PSMPDVSLAYKLHLESATMINIHDWLQSFA 607
             +PD+S+ YKL+ ES  ++N++DW  +F+
Sbjct: 583 SWLPDLSILYKLYSESGALLNLYDWYIAFS 612

Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. ORC binds to multiple sites within the ars1 origin of DNA replication in an ATP-independent manner.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q55BR6|ORC3_DICDI Origin recognition complex subunit 3 OS=Dictyostelium discoideum GN=orcC PE=3 SV=2

 Score = 50.4 bits (119), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 69/136 (50%), Gaps = 1/136 (0%)

Query: 149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
           +I+ ++D+E++   +L++ + +L  Y   +PF+L   +STS   IH  L Y V+S + + 
Sbjct: 415 VILVIEDFETWNSEVLSDLIHLLSAYRHRIPFVLSFSISTSADAIHKVLPYQVVSLLNLK 474

Query: 209 TFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
           + + +   E    +  ++ L ++ P I+      +L  NF     SL T +  ++  I+ 
Sbjct: 475 SLHLRSQNEMFEQLVKHLFLKSQ-PYIISKKAYLYLYYNFKNSYMSLSTTISVLRHFIID 533

Query: 269 HISMNNINALCYNIMN 284
           H   N ++ L  ++ N
Sbjct: 534 HFLENGLSYLTLDLSN 549

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	608
157105563	699	origin recognition complex subunit [Aede	0.789	0.686	0.318	2e-73
170062189	702	origin recognition complex subunit 3 [Cu	0.782	0.678	0.323	5e-71
58381914	697	AGAP010406-PA [Anopheles gambiae str. PE	0.773	0.674	0.332	2e-67
328780027	659	PREDICTED: origin recognition complex su	0.741	0.684	0.335	3e-66
307172479	600	Origin recognition complex subunit 3 [Ca	0.746	0.756	0.326	5e-66
195485092	719	GE13391 [Drosophila yakuba] gi|194177047	0.804	0.680	0.312	3e-65
5391451	721	LATHEO [Drosophila melanogaster] gi|5706	0.736	0.621	0.324	4e-65
125809583	713	GA17948 [Drosophila pseudoobscura pseudo	0.754	0.643	0.312	4e-65
5081626	721	origin recognition complex subunit 3 [Dr	0.736	0.621	0.324	5e-65
17136788	721	latheo, isoform A [Drosophila melanogast	0.736	0.621	0.324	5e-65

>gi|157105563|ref|XP_001648923.1| origin recognition complex subunit [Aedes aegypti] gi|108880045|gb|EAT44270.1| AAEL004328-PA [Aedes aegypti]

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/524 (31%), Positives = 289/524 (55%), Gaps = 44/524 (8%)

Query: 108 VESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNE----IGCKDKLIIALQDYESFPCSI 163
           VE S+ S  E D+     L++   +    + +Y E    +  K  L + + D+E F   +
Sbjct: 146 VEESRTS--EQDDSDSRRLRRNQLNLGVLRAWYLEKHQHLDEKPNLTVIVPDFEVFSPEV 203

Query: 164 LNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLIT 223
           L + LL+L+ Y   LPF+L+ GV+TS + IHS L Y V S +K+  F ++PS+ +LN + 
Sbjct: 204 LQDLLLVLNSYAAELPFVLVFGVATSVATIHSVLPYHVTSKIKLSIFQSEPSVANLNKVL 263

Query: 224 DNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIM 283
           ++++L    P  L   + + L D FLFYDFS+  F++G K  +L+H     I ALC    
Sbjct: 264 ESVLLTPYCPFHLSGNMFKLLTDIFLFYDFSVKGFVEGFKYALLEHFCRGPIYALCSATS 323

Query: 284 NQTLTKQMIN---ANMLNEIKELDSVAKL---------SIKKLDSNGVVKYS-----IEL 326
           ++   +++++   A  L  I++L S   L         +I  L  +  ++       I++
Sbjct: 324 DRDELEEIVDQLSAADLESIRQLQSFRPLIESLNNPQEAIDFLTKDDYLRRMLPSILIDV 383

Query: 327 FEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFIS 386
             F  N + +++ L  LV+DLP  PLGKQLR++YC  +S  V  ++  F+QC+Q++ F+S
Sbjct: 384 HNFWFNFHCAMEMLLVLVHDLPKAPLGKQLRELYCHCISSDV-TQTDEFRQCMQMVSFMS 442

Query: 387 KQELLEKCLQLIQF-ISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQ 445
           K+ELL K L++++  I   +  ++     + + + + L+ ++ ++++   EI  A  E  
Sbjct: 443 KEELLAKTLKVMEVCIGYVDRNDEASDQGVTIFEVQTLEKIINDLERFSTEIAAASMERV 502

Query: 446 IKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKRE 505
               +D + ++    SR +L Q LL + +Q K +  F             +Q        
Sbjct: 503 TVISSDANLISSPKMSRQELNQKLLSAARQPKTESPF-------------MQ-----SVS 544

Query: 506 KFVQYLIKNLFRNYFTPI-QNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQ 564
             V YL  ++FR +  P  +  PL E+ +FSD   +++++ G PRAA+HTALNNP+YY+Q
Sbjct: 545 NLVSYLTHDVFRKHLRPSSKTTPLIELFVFSDSATIRQHMVGVPRAAVHTALNNPHYYLQ 604

Query: 565 CDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
           C+CC++++   ++ ++PD+S+AYKLHLE   MIN+ DWLQ+F T
Sbjct: 605 CECCEMDEDGSLVQTLPDLSVAYKLHLECGRMINLFDWLQAFRT 648

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170062189|ref|XP_001866560.1| origin recognition complex subunit 3 [Culex quinquefasciatus] gi|167880202|gb|EDS43585.1| origin recognition complex subunit 3 [Culex quinquefasciatus]

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 286/529 (54%), Gaps = 53/529 (10%)

Query: 108 VESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNE----IGCKDKLIIALQDYESFPCSI 163
           VE  +A+D ++D      L++   +    + +Y E    +  K  L I + D+E F   +
Sbjct: 147 VEEQRAADEDADSR---QLRRNQLNLGVLRAWYQEKHGHLEKKPNLSIIMPDFEVFSPDV 203

Query: 164 LNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLIT 223
           L + +L+L+ Y   LPF+LILGV+TS + IHS L Y V S +K+  F ++PS+ +LN   
Sbjct: 204 LQDLILVLNSYSTELPFVLILGVATSVATIHSVLPYHVTSKIKLSIFQSEPSVTNLNKTL 263

Query: 224 DNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIM 283
           D+++L    P  L   + + L+D FLFYDFS+  F++G K  +++H    NI  LC    
Sbjct: 264 DSVLLTPFCPFHLSGKVFKLLMDIFLFYDFSVKGFIEGFKYALMEHYFQGNIYGLCSVTS 323

Query: 284 NQTLTKQMI---NANMLNEIKELDSVAKLSIKKLDS-NGVVKY--------------SIE 325
           ++   ++ +    A  +  I++L S   L I+ LD+   VV +               +E
Sbjct: 324 DRDELEEAVENLTATEVESIRQLLSFRPL-IESLDNPQEVVDFLTKDDYLRRMLPSMLLE 382

Query: 326 LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFI 385
           +  F    + +L+ L  LV DLP  PLGKQLR++Y   +S  V  + + FK+C+QL+ F+
Sbjct: 383 VHNFWFMFHCTLEMLQVLVQDLPRGPLGKQLRELYEHCISSDV-TQMAEFKECMQLVAFM 441

Query: 386 SKQELLEKCLQLIQFISK-----QELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNA 440
           SK+E+L K L++I+ I K      E   + ++I  +    + L+ + ++++ L   I  A
Sbjct: 442 SKEEILGKILKMIEVILKFKDMNDEACIRGETIFEV----EPLEQMSDDLEHLTNAIARA 497

Query: 441 DTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEF 500
             EV              P+   +   N++ S K ++ + +  +     + +Q K +  F
Sbjct: 498 GMEV-------------VPEDLEEPSSNVINSPKMNRQELQAKLLS---AARQPKQESAF 541

Query: 501 DIKREKFVQYLIKNLFRNYFTPI-QNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNP 559
                  V Y+   +FR Y  P+ +  PL E+ +F+D   +++++ G PRAA+HTALNNP
Sbjct: 542 TKAINALVAYITNEIFRKYLRPLSRGPPLIELFVFNDAATIRRHIVGVPRAAVHTALNNP 601

Query: 560 NYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
           +YY+QC CC++ D   ++P+MPD+S+AYKLH E   MIN+ DWLQ+F T
Sbjct: 602 HYYLQCGCCELEDDHSLVPTMPDLSVAYKLHAECGRMINLFDWLQAFRT 650

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58381914|ref|XP_311543.2| AGAP010406-PA [Anopheles gambiae str. PEST] gi|55242754|gb|EAA07165.2| AGAP010406-PA [Anopheles gambiae str. PEST]

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/520 (33%), Positives = 279/520 (53%), Gaps = 50/520 (9%)

Query: 117 ESDEDVEVNLKKTHYDFLNFQDYYNE--IGC--KDKLIIALQDYESFPCSILNEFLLILH 172
           ++D   E  L+K   +      +Y E  I C  K KL I + D+E F   +L + +LIL 
Sbjct: 150 QTDTAEEKPLRKNQLNLDVLHAWYTETHINCRVKPKLTIIIPDFELFNPLVLQDLILILD 209

Query: 173 EYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKF 232
            Y  TLPF+L+ GV+T+ S IH+ L Y V S +K+  F ++PS  +LN I D ++L    
Sbjct: 210 SYATTLPFVLVFGVATAISTIHNVLPYHVTSKIKLSIFQSEPSATNLNKILDEVLLTAFC 269

Query: 233 PLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMI 292
           P  L   + + L+D FLFYDFS++ F++G K   L H     INAL   I +    + +I
Sbjct: 270 PFHLSGKVFKLLLDIFLFYDFSVNGFIQGFKFAFLDHYFQQPINALSAIIDDADDLQAII 329

Query: 293 N---ANMLNEIKELDS----VAKLS-----IKKLDSNGVVKYSI-----ELFEFITNMYS 335
           N   +  L +I++L S    V  L      I  L ++   K S+     ++  +    + 
Sbjct: 330 NELTSAELEQIRQLPSFRPYVESLQNPQEVIDILTNDDYFKRSLTPMIMKVHNYWFTFHC 389

Query: 336 SLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCL 395
           +LQ L  LV DLP  PLG+QLR++YC  +S  V  E   FK+C+QL+ F+SK+E+L K  
Sbjct: 390 ALQILHTLVSDLPKAPLGRQLRELYCQCVSCDV-TEQPEFKECMQLLSFLSKEEMLLKIK 448

Query: 396 QLI----QFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTE-VQIKHKN 450
           Q++    Q++ + + L     ++    +   L+ +   +  L +E+  A  E + +  + 
Sbjct: 449 QVLDVVLQWVDRNDQLNIEGCLVY---EVAPLEAMANGLAILSEELAVASHEQIDVDTQQ 505

Query: 451 DISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQY 510
           D   L  +   R +L++ LL + K          K E  + +             K + Y
Sbjct: 506 DKQTLLSSQMGRQELREKLLTAAKH--------AKSESAATR----------AVGKIMDY 547

Query: 511 LIKNLFRNYFTP--IQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCC 568
            + N+F+ +  P   + +P  E+ L++D   +++++ GAPRAA+HTALNNP +Y QC+CC
Sbjct: 548 FLGNIFQRHLHPPTGKKVPFIELFLYNDSSFIRRHIIGAPRAAVHTALNNPQFYTQCECC 607

Query: 569 KVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
            +++ S ++PS+PD+S+AYKLHLE   MIN+ DWLQ+F T
Sbjct: 608 TLDESSCIIPSLPDLSIAYKLHLECGRMINLFDWLQAFRT 647

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780027|ref|XP_003249738.1| PREDICTED: origin recognition complex subunit 3-like [Apis mellifera]

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 171/510 (33%), Positives = 268/510 (52%), Gaps = 59/510 (11%)

Query: 116 VESDEDVEVNLKKTHYDFLNFQDYYNEIGC--KDKLIIALQDYESFPCSILNEFLLILHE 173
           + + ED + ++KK        + ++ E  C   D LII L D+ES P S+L++F+LIL  
Sbjct: 139 INNGEDEDTHIKKNQCHMRALKAWHQE-HCDQNDPLIIILTDFESIPASVLHDFILILSA 197

Query: 174 YLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFP 233
           Y  ++ FILI GV+T+   IH +L YDV S + +  F  +  I+ L+ + +N + +   P
Sbjct: 198 YANSMKFILIFGVATTLFAIHRSLTYDVTSKLNVQVFQTKKQIDVLSDVLENTVFDTNIP 257

Query: 234 LILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALC---YNIMNQTLTKQ 290
             L     + L D FLFYDFS+  F    KIC+++H   NN+N+LC   + I N+  +  
Sbjct: 258 FKLTGRAFQLLTDIFLFYDFSVQNFFLSYKICMIQHFYANNVNSLCCQPHKIENRISS-- 315

Query: 291 MINANMLNEIKELDSVAKLSIKKLDSNG-------VVKYSIELFEFITNMYSS------- 336
            +    LNEIK+L S+ K  I++L   G         K+   L + + N +         
Sbjct: 316 -LTDEDLNEIKKLPSIEK-HIQQLTKKGNKDELLENSKFKEILIQVLNNFHQYMHRFLLI 373

Query: 337 LQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQ 396
           L+CL   V  LPN P+GKQLR+ Y  V+      ES  +K+CLQL+ F+SKQELL K   
Sbjct: 374 LRCLHDFVSTLPNAPMGKQLREFYTTVVYLNNLKESQEYKECLQLLTFLSKQELLSKLNS 433

Query: 397 LIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLN 456
           LI  I+               +++ ++  V +++Q  ++ I  +  EV  K  + +S   
Sbjct: 434 LIAIIAS--------------SKDSDMIKVKKDLQSFEKRIDESSLEVAEKPVDIVSTGE 479

Query: 457 LTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLF 516
               SR QLK+ LL                 K S    K  ++  I ++  + YL + +F
Sbjct: 480 RL--SRLQLKEKLL-----------------KMSKTHSKSPYK--IAQQDLIDYLDQKIF 518

Query: 517 RNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVNDPSEM 576
             Y      +P +EI  F+D +L K+++ G+ R+AIHT LNNP  Y+ C CCK+ +   +
Sbjct: 519 SVYLVNPNYIPGNEIFCFNDGNLAKQHIRGSLRSAIHTGLNNPQVYLNCGCCKLENDDAI 578

Query: 577 LPSMPDVSLAYKLHLESATMINIHDWLQSF 606
             ++PD+S+ YKLHLES  +IN++DWLQ+F
Sbjct: 579 PSTLPDLSIIYKLHLESRKLINMYDWLQAF 608

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172479|gb|EFN63928.1| Origin recognition complex subunit 3 [Camponotus floridanus]

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 169/518 (32%), Positives = 275/518 (53%), Gaps = 64/518 (12%)

Query: 108 VESSKASDVESDEDVEVNLKKTHYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEF 167
           ++ SK+ DV      +  ++     F+ ++D       +D LII L D+ESF  +IL++F
Sbjct: 83  IQKSKSDDVSQLRKSQCTMRALKEWFVEYED------PEDPLIIILPDFESFSTNILHDF 136

Query: 168 LLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNII 227
           +L+L  Y  TL F+LI GV+T+  I+H +L YDV S  K+  F+ Q  +E+L+ + +N +
Sbjct: 137 ILVLSSYRNTLKFVLIFGVATTLHIVHRSLTYDVTS--KLVVFHTQTQVEALSDVLENTV 194

Query: 228 LNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMN-QT 286
            ++K P  L     + L D FLFYDFS+  F++  KIC+++H   NNI++LC    + + 
Sbjct: 195 FSSKIPFKLIGRAFQLLTDIFLFYDFSVDNFLQNFKICMIQHFYGNNISSLCCKPKDIKE 254

Query: 287 LTKQMINANMLNEIKELDSVAK-LSIKKLDSNGVVKYS------------IELFEFITNM 333
              ++ + N+ N IK L S+AK L      +NG  K S            I+  +F+   
Sbjct: 255 RISELTDENIAN-IKNLPSIAKYLKTSSKVTNGNDKLSDKEFKELLESLLIKFHKFMNQF 313

Query: 334 YSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEK 393
              L+CL  LV  LP  P+GKQLR++Y   +      ES  +K+CL+L+ F+SK+ELL  
Sbjct: 314 LIILRCLHCLVAPLPGAPMGKQLREVYTKAVYTNNLTESCEYKECLKLLGFLSKEELLSN 373

Query: 394 CLQLIQFI--SKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKND 451
              +I+ I  SK  +++K+K+         NL + +  +++          E+       
Sbjct: 374 LESIIKIIEDSKDPMIKKIKT---------NLDSRINAIREASLSATKGSFEI------- 417

Query: 452 ISKLNLTPK-SRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQY 510
              +++  K SR QLK+ LL+  +Q          R  +   Q  L           + Y
Sbjct: 418 ---ISVEEKLSRMQLKEKLLKMSQQQS--------RSAYKQAQHDL-----------IDY 455

Query: 511 LIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKV 570
           L + +F  +      +  HEI  +SD +  K ++ G+ RAAIHT LN+P  Y+ CDCCK+
Sbjct: 456 LDREVFSVHLVEPSRVTAHEIFCYSDGNQAKHHIRGSLRAAIHTGLNDPQMYLDCDCCKL 515

Query: 571 NDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
            +  ++  ++PD+S+ YKLHLES  +IN++DWLQ+F T
Sbjct: 516 ENDDDIPRTLPDLSIIYKLHLESRKLINMYDWLQAFLT 553

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195485092|ref|XP_002090946.1| GE13391 [Drosophila yakuba] gi|194177047|gb|EDW90658.1| GE13391 [Drosophila yakuba]

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 282/537 (52%), Gaps = 48/537 (8%)

Query: 101 VTQSDTPVESSKASDVESDEDVEVNLKKTHYDFLNFQDYY-NEIGCKDK---LIIALQDY 156
           + + D  VE     D +  E     L+++       + +Y N    + K   L++ L D+
Sbjct: 151 LVEDDAEVEQMDDVDEDGAERDRKRLRRSQCTMKQLKSWYSNNFNSERKHRQLVVILPDF 210

Query: 157 ESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSI 216
           E F  S+L + +LIL  +  +LPF+L+LGV+T+ + +H TL Y V S +++  F  Q + 
Sbjct: 211 ECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAP 270

Query: 217 ESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNIN 276
             LN + D ++L+ K+   L     +FL   FL+YDFS+H F++G K C+++H    N  
Sbjct: 271 TGLNEVLDKVLLSPKYSFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGNAF 330

Query: 277 ALCYNIMNQTLTKQMINANMLNEIKELDSV---------AKLSIKKLDSNGVVKYSIE-- 325
           ALC +        + ++ + +  I+ L S           K  I  L  +  +K  +   
Sbjct: 331 ALCTDYSKALGRIKQLSHDDMETIRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKLPQL 390

Query: 326 ----LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQL 381
               L  F+     SL+ L  LV DLP  PLGK  R++Y   L+  V + +  +K+C Q+
Sbjct: 391 LRDCLLHFLL-FRCSLEFLTELVGDLPRCPLGKLRRELYVNCLNRAV-ISTPEYKECQQM 448

Query: 382 IQFISKQEL-------LEKCLQ-LIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKL 433
           + F+SK E        LE+  Q L+  I+  EL E   ++  +  + + ++  ++EV K 
Sbjct: 449 LSFLSKDEFVAKVNRSLERTEQFLVDEIAPLELGEACTAV--LKPKLEAIRLSVDEVVKA 506

Query: 434 QQEIKNADTEVQIKHKNDISKLNLTP-KSRAQLKQNLLESIKQDKLQFEFDIKREKFSIK 492
              I  A +  +     D    +LTP  SR +LK  LL+  K+DK++ + +    +F+  
Sbjct: 507 TLAIVTATSPTETSKPTD----HLTPVASRQELKDQLLQRSKEDKMRQQLNTPTTQFA-- 560

Query: 493 QDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNM-PLHEIVLFSDCHLLKKYLAGAPRAA 551
              LQ        K +Q +   + + +  P+Q+  P+HE+ +FSD   +++ + GAPRAA
Sbjct: 561 -RALQ--------KTLQLIQAQIVQAHLRPLQDAPPIHELFVFSDIATVRRNIIGAPRAA 611

Query: 552 IHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
           +HTALNNP++YMQC CC++ D S ++ ++PD+S+ YKLHLE   MIN+ DWLQ+F +
Sbjct: 612 LHTALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYKLHLECGRMINLFDWLQAFRS 668

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|5391451|gb|AAD32712.2|AF152093_1 LATHEO [Drosophila melanogaster] gi|5706712|gb|AAD47349.1| origin recognition complex subunit [Drosophila melanogaster]

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 269/484 (55%), Gaps = 36/484 (7%)

Query: 146 KDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTM 205
           + +L++ L D+E F  S+L + +LIL  +  +LPF+L+LGV+T+ + +H TL Y V S +
Sbjct: 202 RRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKI 261

Query: 206 KIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKIC 265
           ++  F  Q +   LN + D ++L+ K+   L     +FL   FL+YDFS+H F++G K C
Sbjct: 262 RLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYC 321

Query: 266 ILKHISMNNINALCYNIMNQ-TLTKQMINANMLNEIKELDSV---------AKLSIKKLD 315
           +++H    N  ALC +        KQ+ + +M   I+ L S           K  I  L 
Sbjct: 322 LMEHFFGGNAFALCTDYSKALGRIKQLTHEDM-ETIRRLPSFRPYVEQINDCKRIIAVLT 380

Query: 316 SNGVVKYSIE------LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVF 369
            +  +K  +       L  F+     SL+ L  LV DLP  PLGK  R++Y   L+ +  
Sbjct: 381 DDDYLKKKLPQLLRDCLLHFLL-FRCSLEFLTELVGDLPRCPLGKLRRELYVNCLN-RAI 438

Query: 370 VESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEE 429
           + +  +K+C Q++ F+SK E + K  + ++  ++Q L+E++  + L       L+  LE 
Sbjct: 439 ISTPEYKECQQMLSFLSKDEFVAKVNRALER-TEQFLVEEIAPLELGEACTAVLRPKLEA 497

Query: 430 VQ-KLQQEIKNADTEVQIKHKNDISKL--NLTP-KSRAQLKQNLLESIKQDKLQFEFDIK 485
           ++  + + +K     +     N+ S+   +LTP +SR +LK  LL+  K+DK++ + +  
Sbjct: 498 IRLAVDEVVKATMATITTTSPNETSQATDHLTPVRSRQELKDQLLQRSKEDKMRHQLNTP 557

Query: 486 REKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMP-LHEIVLFSDCHLLKKYL 544
             +F      LQ        K +Q +   + +++   +Q+ P +HE+ +FSD   +++ +
Sbjct: 558 TTQFG---RALQ--------KTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNI 606

Query: 545 AGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQ 604
            GAPRAA+HTALNNP++YMQC CC++ D S ++ ++PD+S+ YKLHLE   MIN+ DWLQ
Sbjct: 607 IGAPRAALHTALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYKLHLECGRMINLFDWLQ 666

Query: 605 SFAT 608
           +F +
Sbjct: 667 AFRS 670

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125809583|ref|XP_001361179.1| GA17948 [Drosophila pseudoobscura pseudoobscura] gi|54636353|gb|EAL25756.1| GA17948 [Drosophila pseudoobscura pseudoobscura]

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 161/516 (31%), Positives = 272/516 (52%), Gaps = 57/516 (11%)

Query: 125 NLKKTHYDFLNFQDYYN-----EIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLP 179
            L+++H        +Y      E   K +L++ L D+E F  ++L +F+LIL  +  TLP
Sbjct: 170 RLRRSHCTIKQLNSWYTNNFQAEEERKRQLVVILPDFECFSGNVLQDFILILSAHCGTLP 229

Query: 180 FILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHT 239
           F+L+LGV+T+ S +HSTL Y V S +++  F  QP+   LN + D ++L+  +   L   
Sbjct: 230 FVLVLGVATAMSAVHSTLPYHVSSKIRLRVFQTQPAPNGLNELLDKVLLSPMYSFHLSGK 289

Query: 240 ILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNE 299
             +FL   FL+YDFS+H F++G K C+++H    N  ALC +        +++  + +  
Sbjct: 290 AFKFLTHIFLYYDFSIHGFIQGFKYCLMEHYFAGNAYALCTDYSKALNRIKLLTHDDMET 349

Query: 300 IKELDSV---------AKLSIKKLDSNGVVKYSIE------LFEFITNMYSSLQCLFALV 344
           I+ L S           K  I  L  +  +K  +       L  F+    S+L+    LV
Sbjct: 350 IRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKLPQLLRDCLLHFVL-FRSTLEFFTELV 408

Query: 345 YDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQ-------- 396
            DLP  PLGK LR++Y   L+  +   S  +K+C Q++ F+SK+E + K  +        
Sbjct: 409 GDLPRCPLGKLLRELYVNCLNRPI-TASPEYKECWQMLSFLSKEEFVAKVNKSLARTDHF 467

Query: 397 LIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNADTEVQIKHKNDISK-- 454
           L++ I+  EL E   S+         L+  L+ V++L  ++     E+      D S+  
Sbjct: 468 LVEEIAPLELGEACISV---------LRPQLQSVRQLLDDVVMGTLEMMPAMSTDESRPA 518

Query: 455 LNLTP-KSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIK 513
            +LT   SR +LK  LL+  ++++               Q     EF    +K ++++  
Sbjct: 519 PSLTQVASRQELKAQLLQRSQEER--------------HQQIPTTEFARSVQKVLEHIET 564

Query: 514 NLFRNYFTPIQNM-PLHEIVLFSDCHLLKKYLAGAPRAAIHTALNNPNYYMQCDCCKVND 572
           +L R +   +    PLHE+ +FSD  ++++ + GAPRAA+HTALNNP++YMQC CC++ +
Sbjct: 565 HLVRGHLRALSEAPPLHELFVFSDISIVRRNIIGAPRAALHTALNNPHFYMQCKCCELRE 624

Query: 573 PSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
            ++++ ++PD+S+ YKLHLE   MIN+ DWLQ+F +
Sbjct: 625 QTQLMGTLPDLSVVYKLHLECGRMINLFDWLQAFRS 660

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|5081626|gb|AAD39472.1|AF139062_1 origin recognition complex subunit 3 [Drosophila melanogaster]

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 268/484 (55%), Gaps = 36/484 (7%)

Query: 146 KDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTM 205
           + +L++ L D+E F  S+L + +LIL  +  +LPF+L+LGV+T+ + +H TL Y V S +
Sbjct: 202 RRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKI 261

Query: 206 KIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKIC 265
           ++  F  Q +   LN + D ++L+ K+   L     +FL   FL+YDFS+H F++G K C
Sbjct: 262 RLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYC 321

Query: 266 ILKHISMNNINALCYNIMNQ-TLTKQMINANMLNEIKELDSV---------AKLSIKKLD 315
           +++H    N  ALC +        KQ+ + +M   I+ L S           K  I  L 
Sbjct: 322 LMEHFFGGNAFALCTDYSKALGRIKQLTHEDM-ETIRRLPSFRPYVEQINDCKRIIAVLT 380

Query: 316 SNGVVKYSIE------LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVF 369
            +  +K  +       L  F+     SL+ L  LV DLP  PLGK  R++Y   L+ +  
Sbjct: 381 DDDYLKKKLPQLLRDCLLHFLL-FRCSLEFLTELVGDLPRCPLGKLRRELYVNCLN-RAI 438

Query: 370 VESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEE 429
           + +  +K+CLQ++ F+SK E + K  + ++  ++Q L+E++  + L       L+  LE 
Sbjct: 439 ISTPEYKECLQMLSFLSKDEFVAKVNRALER-TEQFLVEEIAPLELGEACTAVLRPKLEA 497

Query: 430 VQ-KLQQEIKNADTEVQIKHKNDISKL--NLTP-KSRAQLKQNLLESIKQDKLQFEFDIK 485
           ++  + + +K     +     N+  +   +LTP  SR +LK  LL+  K+DK++ + +  
Sbjct: 498 IRLAVDEVVKATMATITTTSPNETRQATDHLTPVASRQELKDQLLQRSKEDKMRHQLNTP 557

Query: 486 REKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMP-LHEIVLFSDCHLLKKYL 544
             +F      LQ        K +Q +   + +++   +Q+ P +HE+ +FSD   +++ +
Sbjct: 558 TTQFG---RALQ--------KTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNI 606

Query: 545 AGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQ 604
            GAPRAA+HTALNNP++YMQC CC++ D S ++ ++PD+S+ YKLHLE   MIN+ DWLQ
Sbjct: 607 IGAPRAALHTALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYKLHLECGRMINLFDWLQ 666

Query: 605 SFAT 608
           +F +
Sbjct: 667 AFRS 670

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17136788|ref|NP_476904.1| latheo, isoform A [Drosophila melanogaster] gi|24653292|ref|NP_725260.1| latheo, isoform B [Drosophila melanogaster] gi|7303352|gb|AAF58411.1| latheo, isoform A [Drosophila melanogaster] gi|16768292|gb|AAL28365.1| GH28787p [Drosophila melanogaster] gi|21627264|gb|AAM68599.1| latheo, isoform B [Drosophila melanogaster] gi|220947184|gb|ACL86135.1| lat-PA [synthetic construct] gi|304361780|gb|ADM26240.1| LP02234p1 [Drosophila melanogaster] gi|356461086|gb|AET07649.1| AT22044p1 [Drosophila melanogaster]

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 268/484 (55%), Gaps = 36/484 (7%)

Query: 146 KDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTM 205
           + +L++ L D+E F  S+L + +LIL  +  +LPF+L+LGV+T+ + +H TL Y V S +
Sbjct: 202 RRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKI 261

Query: 206 KIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKIC 265
           ++  F  Q +   LN + D ++L+ K+   L     +FL   FL+YDFS+H F++G K C
Sbjct: 262 RLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYC 321

Query: 266 ILKHISMNNINALCYNIMNQ-TLTKQMINANMLNEIKELDSV---------AKLSIKKLD 315
           +++H    N  ALC +        KQ+ + +M   I+ L S           K  I  L 
Sbjct: 322 LMEHFFGGNAFALCTDYSKALGRIKQLTHEDM-ETIRRLPSFRPYVEQINDCKRIIAVLT 380

Query: 316 SNGVVKYSIE------LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVF 369
            +  +K  +       L  F+     SL+ L  LV DLP  PLGK  R++Y   L+ +  
Sbjct: 381 DDDYLKKKLPQLLRDCLLHFLL-FRCSLEFLTELVGDLPRCPLGKLRRELYVNCLN-RAI 438

Query: 370 VESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEE 429
           + +  +K+CLQ++ F+SK E + K  + ++  ++Q L+E++  + L       L+  LE 
Sbjct: 439 ISTPEYKECLQMLSFLSKDEFVAKVNRALER-TEQFLVEEIAPLELGEACTAVLRPKLEA 497

Query: 430 VQ-KLQQEIKNADTEVQIKHKNDISKL--NLTP-KSRAQLKQNLLESIKQDKLQFEFDIK 485
           ++  + + +K     +     N+  +   +LTP  SR +LK  LL+  K+DK++ + +  
Sbjct: 498 IRLAVDEVVKATMATITTTSPNETRQATDHLTPVASRQELKDQLLQRSKEDKMRHQLNTP 557

Query: 486 REKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMP-LHEIVLFSDCHLLKKYL 544
             +F      LQ        K +Q +   + +++   +Q+ P +HE+ +FSD   +++ +
Sbjct: 558 TTQFG---RALQ--------KTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNI 606

Query: 545 AGAPRAAIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQ 604
            GAPRAA+HTALNNP++YMQC CC++ D S ++ ++PD+S+ YKLHLE   MIN+ DWLQ
Sbjct: 607 IGAPRAALHTALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYKLHLECGRMINLFDWLQ 666

Query: 605 SFAT 608
           +F +
Sbjct: 667 AFRS 670

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	608
FB|FBgn0005654	721	lat "latheo" [Drosophila melan	0.807	0.680	0.305	4.3e-61
UNIPROTKB|F1S0E8	717	ORC3 "Uncharacterized protein"	0.703	0.596	0.301	4.2e-55
ZFIN|ZDB-GENE-030131-6247	713	orc3 "origin recognition compl	0.656	0.559	0.258	1.5e-36
UNIPROTKB|F1N6W8	712	ORC3 "Origin recognition compl	0.550	0.470	0.292	9.4e-33
UNIPROTKB|Q32PJ3	712	ORC3 "Origin recognition compl	0.550	0.470	0.292	9.4e-33
UNIPROTKB|F1Q348	712	ORC3 "Uncharacterized protein"	0.705	0.602	0.270	3.1e-32
UNIPROTKB|F1P1T6	502	ORC3 "Uncharacterized protein"	0.524	0.635	0.285	7e-32
UNIPROTKB|F1P1T5	719	ORC3 "Uncharacterized protein"	0.532	0.450	0.270	1.8e-30
UNIPROTKB|Q9UBD5	711	ORC3 "Origin recognition compl	0.703	0.601	0.257	1.8e-30
UNIPROTKB|Q5DJU3	713	ORC3 "Origin recognition compl	0.554	0.472	0.264	6.4e-30

FB|FBgn0005654 lat "latheo" [Drosophila melanogaster (taxid:7227)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 163/533 (30%), Positives = 276/533 (51%)

Query:   101 VTQSDTPVESSKASDVESD--EDVEVNLKKTHYDFLNFQDYY-NEIGCKDK---LIIALQ 154
             + + +  VE  +  D + D  E     L+++       + +Y N    + K   L++ L 
Sbjct:   151 LVEDNAEVEQMEDEDEDEDGAERDRKRLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILP 210

Query:   155 DYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQP 214
             D+E F  S+L + +LIL  +  +LPF+L+LGV+T+ + +H TL Y V S +++  F  Q 
Sbjct:   211 DFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQA 270

Query:   215 SIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNN 274
             +               K+   L     +FL   FL+YDFS+H F++G K C+++H    N
Sbjct:   271 APTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGN 330

Query:   275 INALCYNIMNQT-LTKQMINANMLNEIKELDSV---------AKLSIKKLDSNGVVKYSI 324
               ALC +        KQ+ + +M   I+ L S           K  I  L  +  +K  +
Sbjct:   331 AFALCTDYSKALGRIKQLTHEDM-ETIRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKL 389

Query:   325 E------LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTFKQC 378
                    L  F+     SL+ L  LV DLP  PLGK  R++Y   L+  + + +  +K+C
Sbjct:   390 PQLLRDCLLHFLL-FRCSLEFLTELVGDLPRCPLGKLRRELYVNCLNRAI-ISTPEYKEC 447

Query:   379 LQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIK 438
             LQ++ F+SK E + K  + ++  ++Q L+E++  + L       L+  LE ++    E+ 
Sbjct:   448 LQMLSFLSKDEFVAKVNRALER-TEQFLVEEIAPLELGEACTAVLRPKLEAIRLAVDEVV 506

Query:   439 NAD-TEVQIKHKNDISKL--NLTP-KSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQD 494
              A    +     N+  +   +LTP  SR +LK  LL+  K+DK++ + +    +F     
Sbjct:   507 KATMATITTTSPNETRQATDHLTPVASRQELKDQLLQRSKEDKMRHQLNTPTTQFG---R 563

Query:   495 KLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMP-LHEIVLFSDCHLLKKYLAGAPRAAIH 553
              LQ        K +Q +   + +++   +Q+ P +HE+ +FSD   +++ + GAPRAA+H
Sbjct:   564 ALQ--------KTLQLIETQIVQDHLRALQDAPPIHELFVFSDIATVRRNIIGAPRAALH 615

Query:   554 TALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSF 606
             TALNNP++YMQC CC++ D S ++ ++PD+S+ YKLHLE   MIN+ DWLQ+F
Sbjct:   616 TALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYKLHLECGRMINLFDWLQAF 668

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS;IDA

GO:0006270 "DNA replication initiation" evidence=IDA

GO:0008355 "olfactory learning" evidence=TAS

GO:0006260 "DNA replication" evidence=NAS

GO:0003677 "DNA binding" evidence=IEA;NAS

GO:0007612 "learning" evidence=NAS

GO:0030536 "larval feeding behavior" evidence=NAS

GO:0007611 "learning or memory" evidence=NAS

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0051298 "centrosome duplication" evidence=IMP

GO:0051297 "centrosome organization" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

UNIPROTKB|F1S0E8 ORC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 540 (195.1 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
 Identities = 144/478 (30%), Positives = 255/478 (53%)

Query:   149 LIIALQDYESFPCSILNEFLLILH--EYLVTLPFILILGVSTSPSIIHSTLNYDVISTMK 206
             +++ L+D ESF   +L +F++I    ++L   P ILI G++TSP IIH  L + V S + 
Sbjct:   215 VVLILKDMESFTTKVLQDFIIISRTSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLC 274

Query:   207 IHTFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICI 266
             +  F +    E             +FP  L   +L+ L + FL++DFS+  F+KG+++ +
Sbjct:   275 LELFQSLSCKEHLTTVLDKLLLTTQFPFKLSEKVLQILTNIFLYHDFSIQNFIKGLQLSL 334

Query:   267 LKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDS----VAKLSIKK---LDSNGV 319
             L+H     ++ LC N++      + ++ N    I+ L S    V K +++K   L +N +
Sbjct:   335 LEHFYSQPLSVLCCNLLEAKRRIRFLSNNQCENIRRLPSFRRYVEKQALEKQVALLTNEI 394

Query:   320 -VKYSIE-LFE----FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESS 373
              +K   + L E    + TN +  L+ L      LP  PLG+Q+R++YC  L + ++ +S 
Sbjct:   395 FLKEEAQSLLENLHVYHTNYFLVLRGLHQFTSSLPKYPLGRQIRELYCTCLEKNIW-DSE 453

Query:   374 TFKQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEV 430
              +   LQL++ ++K EL   L+KC ++ +  S+++L           N  K ++  L + 
Sbjct:   454 EYASALQLLRMLAKDELVTILQKCFKVFKSSSEKQLG----------NAAKKIEEFLAQF 503

Query:   431 QKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFS 490
             Q L       D + + K + D S      +S+   K +L   +++  L+ + +++R   S
Sbjct:   504 QSL-------DVKAEAKEEEDTSG----SQSKGLQKTDLYH-LQKSLLEMK-ELRRT--S 548

Query:   491 IKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGAPRA 550
              KQ K    F++ RE+ V + I +L R +  P +  PLHE++ FS    L+++L  APR 
Sbjct:   549 KKQTK----FEVLREQIVSF-IDSLVREHLLPPETQPLHEVMYFSAAQALRQHLNAAPRI 603

Query:   551 AIHTALNNPNYYMQCDCCKVNDPSEMLPSMPDVSLAYKLHLESATMINIHDWLQSFAT 608
             A+HTALNNP YY++ +  + ++   +    PD+ +AYKLHLE + +IN+ DW ++FAT
Sbjct:   604 ALHTALNNPYYYLKNEALR-SEEGCIPNVAPDICIAYKLHLECSRLINLVDWSEAFAT 660

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-030131-6247 orc3 "origin recognition complex, subunit 3" [Danio rerio (taxid:7955)]

 Score = 414 (150.8 bits), Expect = 1.5e-36, P = 1.5e-36
 Identities = 116/449 (25%), Positives = 216/449 (48%)

Query:   141 NEIGCKDKL--IIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLN 198
             N+ G +  L  ++  +D+E+F   +L +F+ I   Y+  LPFI + G++TSPS I   L 
Sbjct:   204 NDNGLRQSLPVVVIFKDFEAFNSQVLQDFIHICSRYIQELPFIFVFGIATSPSAIQHRLP 263

Query:   199 YDVISTMKIHTFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTF 258
             + V S + I  F +    +              FP  L   +++ L+  FL++DFS+  F
Sbjct:   264 HSVSSLLCIEVFQSVSCTQHLASVFDKLILNAHFPFKLSSRVIQVLVGIFLYHDFSVQNF 323

Query:   259 MKGVKICILKHISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKL--------S 310
             +KG++  +L+H +   ++ LC       L  + ++   +  I+ L S  +          
Sbjct:   324 VKGLQFSMLEHFNSQPLSVLCCRKREALLCAKTLSQQNVERIRHLPSFMRYVETQEPQEQ 383

Query:   311 IKKLDSNGVVKYSIE-----LFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLS 365
             +K L ++  VK   +     L ++  N +  LQCL +L   LP  PLGK +R+++ +  +
Sbjct:   384 VKLLTNDQHVKEVCQTLLKSLHKYHKNYFPILQCLHSLTSSLPKFPLGKHIRELH-VSCN 442

Query:   366 EKVFVESSTFKQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKN 422
             EK  +E+  +   +QL++ ++K EL   L+ C  ++Q  S + +    + +   +N+ + 
Sbjct:   443 EKNLLETEEYDSAMQLLRILAKNELVAALQGCSDILQSASTKRMQTVFQQVEDFINRLET 502

Query:   423 LKTVLEEVQKLQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEF 482
             L++V  E   +   I     ++  + K D+           QL++ LLE  K+ +     
Sbjct:   503 LESVSSEDSSVNGAISG---KIDYQRKTDLF----------QLQKTLLE--KESR----- 542

Query:   483 DIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKK 542
               + +K S         F++ R + +++ I +L R Y TP    PL E+  FS   +L++
Sbjct:   543 --RTKKMS--------PFEVLRSQVIEF-IDSLVREYLTPAHLQPLSEVCYFSSSGILRQ 591

Query:   543 YLAGAPRAAIHTALNNPNYYMQCDCCKVN 571
              L   PR +I  AL++P YY+Q +  K N
Sbjct:   592 RLNVTPRTSIQAALSHPYYYLQNESLKTN 620

GO:0003677 "DNA binding" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|F1N6W8 ORC3 "Origin recognition complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
 Identities = 104/356 (29%), Positives = 177/356 (49%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++ L+D ESF   +L +F++I  ++L   P ILI G++TSP +IH  L + V S + I 
Sbjct:   215 VVLILKDMESFTTKVLQDFIIISSQHLHEFPLILIFGIATSPVVIHRLLPHAVSSLLCIE 274

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    E             +FP  L   +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct:   275 LFQSLSCKEHLTTVLDKLLLTTQFPFKLSEKVLQILTNIFLYHDFSIQNFIKGLQLSLLE 334

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDS----VAKLSIKK----LDSNGVV 320
             H     ++ LC N+       + ++AN    I+ L S    V K S +K    L S+  +
Sbjct:   335 HFYSQPLSVLCCNLPEAKRRIRFLSANQCENIRRLPSFRRYVEKQSSEKQVALLTSDKFL 394

Query:   321 KYSIE-LFE----FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
             K   + L E    +  N +  L+CL      LP  PLG+Q+R++YC+ L + ++ +S  +
Sbjct:   395 KEETQSLLENLHVYHKNYFLVLRCLHQFTSSLPKYPLGRQIRELYCMCLEKSIW-DSEEY 453

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
                LQL++ ++K EL   L+ C +L Q  S +EL    K I   L Q ++L    EE   
Sbjct:   454 ASVLQLLRLLAKDELMAMLQNCFKLFQSSSGKELGNTAKRIEEFLAQFQSLDETKEEEDT 513

Query:   433 LQQEIKNAD-TEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKRE 487
              Q + K    T++    K+ +    L   S+ Q K    E +++  + F   + RE
Sbjct:   514 SQSQSKGLQKTDLYHLQKSLLEMKELRSTSKRQTK---FEVLREQVVSFVDSLVRE 566

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q32PJ3 ORC3 "Origin recognition complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
 Identities = 104/356 (29%), Positives = 177/356 (49%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++ L+D ESF   +L +F++I  ++L   P ILI G++TSP +IH  L + V S + I 
Sbjct:   215 VVLILKDMESFTTKVLQDFIIISSQHLHEFPLILIFGIATSPVVIHRLLPHAVSSLLCIE 274

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    E             +FP  L   +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct:   275 LFQSLSCKEHLTTVLDKLLLTTQFPFKLSEKVLQILTNIFLYHDFSIQNFIKGLQLSLLE 334

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDS----VAKLSIKK----LDSNGVV 320
             H     ++ LC N+       + ++AN    I+ L S    V K S +K    L S+  +
Sbjct:   335 HFYSQPLSVLCCNLPEAKRRIRFLSANQCENIRRLPSFRRYVEKQSSEKQVALLTSDKFL 394

Query:   321 KYSIE-LFE----FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
             K   + L E    +  N +  L+CL      LP  PLG+Q+R++YC+ L + ++ +S  +
Sbjct:   395 KEETQSLLENLHVYHKNYFLVLRCLHQFTSSLPKYPLGRQIRELYCMCLEKSIW-DSEEY 453

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
                LQL++ ++K EL   L+ C +L Q  S +EL    K I   L Q ++L    EE   
Sbjct:   454 ASVLQLLRLLAKDELMAMLQNCFKLFQSSSGKELGNTAKRIEEFLAQFQSLDETKEEEDT 513

Query:   433 LQQEIKNAD-TEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKRE 487
              Q + K    T++    K+ +    L   S+ Q K    E +++  + F   + RE
Sbjct:   514 SQSQSKGLQKTDLYHLQKSLLEMKELRSTSKRQTK---FEVLREQVVSFVDSLVRE 566

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1Q348 ORC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 379 (138.5 bits), Expect = 3.1e-32, Sum P(2) = 3.1e-32
 Identities = 128/473 (27%), Positives = 222/473 (46%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++ L+D ESF   +L +F++I  ++L   P ILI G++TSP IIH  L + V S + I 
Sbjct:   215 VVLILKDMESFTTKVLQDFIIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIE 274

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    E             +FP  L   +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct:   275 LFQSLSCKEHLTTVLDKLLLTTQFPFKLSEKVLQILTNIFLYHDFSIQNFIKGLQLSLLE 334

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDS----VAKLSIKK----LDSNGVV 320
             H     ++ LC N+         ++ N    I+ L S    V K + +K    L +   +
Sbjct:   335 HFYSQPLSVLCCNLPEAKRRINFLSDNQCENIRRLPSFRRYVEKQASEKQVALLTNERFL 394

Query:   321 KYSIE-LFE----FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
             K  I+ L E    + +N +  L+CL      LP  PLG+Q+R++YC  L + ++ +S  +
Sbjct:   395 KEEIQSLLENLHVYHSNYFLVLRCLHQFTSSLPKYPLGRQIRELYCTCLEKNIW-DSEEY 453

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
                LQL++ ++K EL   L+KC ++ +  S+++L    K I   L Q +NL    EE   
Sbjct:   454 VSALQLLRMLAKDELMTILQKCFKIFKSTSEKQLGSTAKRIEEFLAQFQNLDEAKEE--- 510

Query:   433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIK 492
              +    +    +Q   K D+  L    KS  ++K    E  + +K Q  F++ REK    
Sbjct:   511 -EDTSGSLSKGLQ---KTDLYHLQ---KSLLEMK----ELRRTNKKQTRFEVLREKVVNF 559

Query:   493 QDKLQFEFDIKRE-----KFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGA 547
              D L  E+ +  E     + V +   +  R +      + LH   L +  + LK     +
Sbjct:   560 IDSLVREYLLPPETQPLHEVVYFTAGHTLREHLNAAPRIALHT-ALNNPYYYLKNEALKS 618

Query:   548 PRAAIHTALNNP--NYYMQCDCCK-VN--DPSEMLPSMPDVSLAYKLHLESAT 595
                 I     +    Y +  +C + +N  D SE   ++  V+ A K+  +SAT
Sbjct:   619 EEGCIPNVAPDICIAYKLHLECSRLINLVDWSEAFATV--VTAAEKMDADSAT 669

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1P1T6 ORC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 363 (132.8 bits), Expect = 7.0e-32, P = 7.0e-32
 Identities = 100/350 (28%), Positives = 176/350 (50%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++  +D ESF   +L +F++I  +++   P +LI G++TSP IIHS L + V S + I 
Sbjct:    69 VVVIFKDMESFTTKVLQDFVVISSQHIGEFPLVLIFGIATSPMIIHSLLPHSVSSLLCIE 128

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    +             +FPL L   +L+ LI+ FL++DFS+  F+KG ++CI++
Sbjct:   129 LFQSLSCKDHLSTIIDKILLTTQFPLKLSEKVLQVLINIFLYHDFSVQNFIKGFQLCIVE 188

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSV-----AKLSIKKL-----DSN- 317
             H   N ++ LC  +         ++ N    ++ L S      +++S K++     DS+ 
Sbjct:   189 HFHSNPLSVLCCQLEEAKRRVNSLSHNQCENVRRLPSFRRYVESQVSEKQIALLTVDSSL 248

Query:   318 --GVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
                V K   +L  +  N +  L+CL      LP  PLGKQ+R+++C  L  +V+ E+  +
Sbjct:   249 KEAVRKLLEDLNVYHENYFPILRCLHVFTSSLPKYPLGKQIRELHCACLENRVW-ETEEY 307

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
             +  LQL + ++K +L   L+KC++++     +E  E V+           LK  L + QK
Sbjct:   308 ESSLQLARMLNKSDLVTMLQKCVEILVSSPGREFDEIVEK----------LKEFLTQFQK 357

Query:   433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKL-QFE 481
             L++  +  D  +    K    K NL    +  L+  L ES +  KL +FE
Sbjct:   358 LEEAYQERDESIS-PQKELQKKTNLYHLQKTLLE--LKESRRSKKLTKFE 404

GO:0003677 "DNA binding" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

UNIPROTKB|F1P1T5 ORC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 363 (132.8 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 95/351 (27%), Positives = 180/351 (51%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++  +D ESF   +L +F++I  +++   P +LI G++TSP IIHS L + V S + I 
Sbjct:   221 VVVIFKDMESFTTKVLQDFVVISSQHIGEFPLVLIFGIATSPMIIHSLLPHSVSSLLCIE 280

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    +             +FPL L   +L+ LI+ FL++DFS+  F+KG ++CI++
Sbjct:   281 LFQSLSCKDHLSTIIDKILLTTQFPLKLSEKVLQVLINIFLYHDFSVQNFIKGFQLCIVE 340

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSV-----AKLSIKKL-----DSN- 317
             H   N ++ LC  +         ++ N    ++ L S      +++S K++     DS+ 
Sbjct:   341 HFHSNPLSVLCCQLEEAKRRVNSLSHNQCENVRRLPSFRRYVESQVSEKQIALLTVDSSL 400

Query:   318 --GVVKYSIELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
                V K   +L  +  N +  L+CL      LP  PLGKQ+R+++C  L  +V+ E+  +
Sbjct:   401 KEAVRKLLEDLNVYHENYFPILRCLHVFTSSLPKYPLGKQIRELHCACLENRVW-ETEEY 459

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
             +  LQL + ++K +L   L+KC++++     +E  E V+ +   L Q + L     E + 
Sbjct:   460 ESSLQLARMLNKSDLVTMLQKCVEILVSSPGREFDEIVEKLKEFLTQFQKL-----EAEA 514

Query:   433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLES--IKQDKLQFE 481
              Q+  ++   + +++ K ++  L    K+  +LK++       K + L+FE
Sbjct:   515 YQERDESISPQKELQKKTNLYHLQ---KTLLELKESRRSKKLTKFEMLRFE 562

GO:0003677 "DNA binding" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

UNIPROTKB|Q9UBD5 ORC3 "Origin recognition complex subunit 3" [Homo sapiens (taxid:9606)]

 Score = 356 (130.4 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
 Identities = 122/473 (25%), Positives = 213/473 (45%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++ L+D ESF   +L +F++I  ++L   P ILI G++TSP IIH  L + V S + I 
Sbjct:   215 VVVILKDMESFATKVLQDFIIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIE 274

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F +    E             +FP  ++  +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct:   275 LFQSLSCKEHLTTVLDKLLLTTQFPFKINEKVLQVLTNIFLYHDFSVQNFIKGLQLSLLE 334

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVV-----KYS 323
             H     ++ LC N+         ++ N    I+ L S  +   K+     V      +Y 
Sbjct:   335 HFYSQPLSVLCCNLPEAKRRINFLSNNQCENIRRLPSFRRYVEKQASEKQVALLTNERYL 394

Query:   324 IE----LFE----FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
              E    L E    +  N +  L+CL      LP  PLG+Q+R++YC  L + ++ +S  +
Sbjct:   395 KEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKYPLGRQIRELYCTCLEKNIW-DSEEY 453

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
                LQL++ ++K EL   LEKC ++ +   +  L    K I   L Q ++L    EE   
Sbjct:   454 ASVLQLLRMLAKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLAQFQSLDETKEEEDA 513

Query:   433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIK 492
                + K          K D+  L    KS  ++K+     +++ K Q +F++ RE     
Sbjct:   514 SGSQPKGLQ-------KTDLYHLQ---KSLLEMKE-----LRRSKKQTKFEVLRENVVNF 558

Query:   493 QDKLQFEFDIKRE-----KFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLKKYLAGA 547
              D L  E+ +  E     + V +   +  R +      + LH   L +  + LK     +
Sbjct:   559 IDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALHT-ALNNPYYYLKNEALKS 617

Query:   548 PRAAIHTALNNP--NYYMQCDCCK-VN--DPSEMLPSMPDVSLAYKLHLESAT 595
                 I     +    Y +  +C + +N  D SE   ++  V+ A K+   SAT
Sbjct:   618 EEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATV--VTAAEKMDANSAT 668

GO:0005664 "nuclear origin of replication recognition complex" evidence=IDA

GO:0000808 "origin recognition complex" evidence=IDA

GO:0003688 "DNA replication origin binding" evidence=TAS

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000216 "M/G1 transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006260 "DNA replication" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5DJU3 ORC3 "Origin recognition complex subunit 3" [Spermophilus citellus (taxid:9997)]

 Score = 358 (131.1 bits), Expect = 6.4e-30, P = 6.4e-30
 Identities = 94/355 (26%), Positives = 171/355 (48%)

Query:   149 LIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIH 208
             +++ L+D ESF   IL +F++I  ++L   P ILI G++TSP IIH  L + V S + I 
Sbjct:   215 VVLILKDMESFTTKILQDFIIISSQHLHEFPLILIFGIATSPIIIHRLLPHAVSSLLCIE 274

Query:   209 TFYNQPSIESXXXXXXXXXXXXKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILK 268
              F + P  E             +FP  +   +L+ L + FL++DFS+  F+KG+++ +L+
Sbjct:   275 LFQSLPCKEHLTTVLDKLLLTAQFPFKISEKVLQILTNIFLYHDFSIQNFVKGLQLSLLE 334

Query:   269 HISMNNINALCYNIMNQTLTKQMINANMLNEIKELDSVAKLSIKKLDSNGVVKYSIELF- 327
             H     ++ LC ++         ++A+    I+ L S  +   K++    V   + E F 
Sbjct:   335 HFYSQPLSVLCCSLPEAKRRINFLSAHQCENIRRLPSFRRYVEKQVSEKQVALLTNERFL 394

Query:   328 --E----------FITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCIVLSEKVFVESSTF 375
               E          + TN +  L+CL      LP  PLG+Q+R++YC  L + ++ +S  +
Sbjct:   395 KEETQSLLENLHVYHTNYFLVLRCLHNFTSSLPKYPLGRQIRELYCTCLEKNIW-DSEEY 453

Query:   376 KQCLQLIQFISKQEL---LEKCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQK 432
                LQL++ +++ +L   L+KC ++ +  S+++L    K I   L Q ++L    +E + 
Sbjct:   454 ASALQLLRMLARDDLMTILQKCFKVFKSSSEKQLGSTAKRIEEFLAQFQSLDADAKEEED 513

Query:   433 LQQEIKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKRE 487
                       +  + H    S L +    R   KQ   E +++  + F   + RE
Sbjct:   514 ASGSQPKGLQKTDLYHLQK-SLLEMKELRRTSKKQTRFEVLREKVVNFIDCLVRE 567

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q32PJ3	ORC3_BOVIN	No assigned EC number	0.3107	0.7532	0.6432	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	608
pfam07034	313	pfam07034, ORC3_N, Origin recognition complex (ORC	2e-35

>gnl|CDD|219275 pfam07034, ORC3_N, Origin recognition complex (ORC) subunit 3 N-terminus

 Score =  135 bits (342), Expect = 2e-35
 Identities = 49/133 (36%), Positives = 83/133 (62%)

Query: 146 KDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTM 205
              +++ L+D+ESF   +L +F+LIL EY+ +LPF+L+ G++TSPS IH  L + V S +
Sbjct: 181 SPPVVVILKDFESFSPKVLQDFILILSEYVSSLPFVLVFGIATSPSAIHKLLPHHVSSLL 240

Query: 206 KIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKIC 265
            +  F +    + LN + D ++L   FP  L   + + L D FL++DFS+  F+KG+K+ 
Sbjct: 241 CLELFQSLSPTQHLNAVLDKVLLTPCFPFKLSGKVFQVLTDIFLYHDFSVQNFIKGLKLA 300

Query: 266 ILKHISMNNINAL 278
           +L+H     ++AL
Sbjct: 301 LLEHFFTQPLSAL 313

This family represents the N-terminus (approximately 300 residues) of subunit 3 of the eukaryotic origin recognition complex (ORC). Origin recognition complex (ORC) is composed of six subunits that are essential for cell viability. They collectively bind to the autonomously replicating sequence (ARS) in a sequence-specific manner and lead to the chromatin loading of other replication factors that are essential for initiation of DNA replication. Length = 313

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	608
PF07034	330	ORC3_N: Origin recognition complex (ORC) subunit 3	100.0
KOG2538|consensus	578		100.0
KOG2538|consensus	578		97.61
PRK00411	394	cdc6 cell division control protein 6; Reviewed	88.19
TIGR02928	365	orc1/cdc6 family replication initiation protein. M	87.25
PTZ00112	1164	origin recognition complex 1 protein; Provisional	84.31
PF07693	325	KAP_NTPase: KAP family P-loop domain; InterPro: IP	82.76

>PF07034 ORC3_N: Origin recognition complex (ORC) subunit 3 N-terminus; InterPro: IPR020795 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []

Probab=100.00  E-value=4.9e-44  Score=377.68  Aligned_cols=203  Identities=31%  Similarity=0.524  Sum_probs=173.3

Q ss_pred             HhhhhcccccccHHHHHHhh-cccchheecccCCC-cc-c-----------ccCCCCCCcchhhhhcccccCCChHHHHH
Q psy177           73 VNLKKTHHDFLNFQDYYNEI-GCKDKLIIVTQSDT-PV-E-----------SSKASDVESDEDVEVNLKKTHYDFLNFQD  138 (608)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~-----------~~~~~~~~~~~~~~~~~~~~~yDl~~L~~  138 (608)
                      ||+.+|...|-.|...+++. ||+-   +.++|-. +. +           ......++++++...++++.+|||+.|++
T Consensus        97 vN~~dh~~~F~~L~~~L~~~~~~~v---v~L~S~dc~~lk~~lk~iv~ql~~~~~~~~~~~~~~~~~~~~~~yd~~~L~~  173 (330)
T PF07034_consen   97 VNIPDHDLLFEQLSERLQSSVGPYV---VRLNSKDCSNLKSALKSIVRQLMSDKSDVDEDEEEEEKGQRRLNYDMDILAA  173 (330)
T ss_pred             CCCccHHHHHHHHHHHHHhCCCcEE---EEEecccchHHHHHHHHHHHHHHhcccccccccchhhcccCcCCCCHHHHHH
Confidence            57777888888888888777 6653   3334321 11 0           11111222222334789999999999999


Q ss_pred             HHHhh-----------------CCCCcEEEEeccCCCCChhhHHHHHHHHHHhhccCCeEEEEccccChHHHhhhccHHH
Q psy177          139 YYNEI-----------------GCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDV  201 (608)
Q Consensus       139 Wy~~~-----------------~~~~~LVIileD~EsFd~~VL~DlI~llSs~~~~IP~vlIfGIATsv~~~~~~Lp~s~  201 (608)
                      ||...                 ..++||||||+|+|+||++||+|||.+||+|+++|||+||||||||+++||++||+++
T Consensus       174 wy~~~~~~~~~~~~~~~~~~~~~~~~~lVIi~eD~EsF~~~VL~dlI~ils~~~~~lP~vli~GiaTs~~~~~~~Lp~~~  253 (330)
T PF07034_consen  174 WYQNNTKKNDSPSKQKNFSSSRDKSPPLVIIFEDFESFDSQVLQDLILILSSYLDRLPFVLIFGIATSVEAFHSRLPRST  253 (330)
T ss_pred             HHHhhhccccchhhhcccccccccCCCEEEEEcccccCCHHHHHHHHHHHHhccCCcCEEEEEecCCChHHHHhhCCHHH
Confidence            99921                 1127999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcccceeeeecChhhHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHhhhhcCchhhh
Q psy177          202 ISTMKIHTFYNQPSIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINAL  278 (608)
Q Consensus       202 ~~~L~~~~F~~~~~~~~l~~I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~d~Sv~~fi~~LK~a~M~HFy~nPLSvL  278 (608)
                      +++|++++|+++++..++++|++++|++++.||+|||+++++|+++|++||+||++||++||||||+|||+||||+|
T Consensus       254 ~~~L~~~~F~~~~~~~~l~~v~~~~l~~~~~~~~l~~~~~~~L~~~f~~~~~Sv~~fi~~lk~~~m~HF~~nPLS~L  330 (330)
T PF07034_consen  254 LSLLRIKKFQLQSSSEILERVLEKVLLSPDFPFKLGPRVLQFLLDRFLDHDFSVDSFISGLKYAYMEHFYSNPLSVL  330 (330)
T ss_pred             HhhcCceEEEeCChHHHHHHHHHHHhcCCCCCceECHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhccCCcccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999986

ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. ; GO: 0003677 DNA binding, 0006260 DNA replication, 0005664 nuclear origin of replication recognition complex

>KOG2538|consensus

Probab=100.00  E-value=3.4e-38  Score=339.44  Aligned_cols=273  Identities=27%  Similarity=0.372  Sum_probs=196.6

Q ss_pred             HHHHHHHHcCCChHHHHhh------hcCCchhHHhH-----HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Q psy177          294 ANMLNEIKELDSVAKLSIK------KLDSNGVVKYS-----IELFEFITNMYSSLQCLFALVYDLPNNPLGKQLRDIYCI  362 (608)
Q Consensus       294 ~~~le~iR~LPSFr~~vE~------LL~dD~~l~~~-----~~l~~~~~~~~~~Lr~L~~l~~~l~~~PlGk~~~eLy~~  362 (608)
                      +.++|.||+|||||+|||.      +|++|.+++++     +.+.-++..++.+|+||+-...         ..+++|+.
T Consensus       233 h~d~E~I~~lpsfr~yvEk~~~~kaiL~~~~y~~k~~i~l~~~~~~~~~l~r~~L~~l~~~~~---------l~~~l~~~  303 (578)
T KOG2538|consen  233 HVDTERIRRLPSFRPYVEKNLRQKAILTLDRYLKKVPIQLLEGLLYAHDLFRKILSTLDGKLN---------LVRALYRL  303 (578)
T ss_pred             hhhHHHHhcCCcchhhHHhhhhhhhhhhhHHHHHHhhHHHHhhhHHHHHHHHHHHHHHhhhhH---------HHHHHHHH
Confidence            8899999999999999998      99999999988     8888888889999999987533         79999999


Q ss_pred             HHhCCCcccchhHHHHHHHHhhcCHHHHHH--HHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhc
Q psy177          363 VLSEKVFVESSTFKQCLQLIQFISKQELLE--KCLQLIQFISKQELLEKVKSIILILNQNKNLKTVLEEVQKLQQEIKNA  440 (608)
Q Consensus       363 aL~~~~l~~S~~~~~~l~llk~ls~deL~~--~L~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~~~L~~L~~~~~~~  440 (608)
                      |+ +..++++++|.++++++.++.+|++.+  ....|.+.+..- . +            +-++.+-.-.+.+....+..
T Consensus       304 cL-~r~i~sT~e~~~~~~ml~fL~~d~~~t~~i~~~c~~~lr~~-~-~------------~~l~~~~~~v~~~~~~~qq~  368 (578)
T KOG2538|consen  304 CL-ERAILSTPEYMDALQMLVFLKKDEFFTNFISEKCAAFLRSY-F-L------------KILGTLDSFVETLKAAIQQH  368 (578)
T ss_pred             HH-HHHhcCCHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHH-H-H------------HHHhhhHHHHHHHHHHHhcc
Confidence            99 999999999999999999999999998  666777666421 0 0            11111111122222222221


Q ss_pred             Ch-hhhhhccccccccCCCcc-chHHHHHHHHHHhhhhhhhhhhhhcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy177          441 DT-EVQIKHKNDISKLNLTPK-SRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRN  518 (608)
Q Consensus       441 ~~-e~~~~~~~~~~~~~~~~~-s~~~lq~~Ll~~s~~~~~s~~~s~~~s~~~~~~~~~~~e~~~l~~~~~d~L~~~~l~~  518 (608)
                      .. |+.   ....   +.+++ +...+..-+++.++-..+..-.....+.          +|.++..+++..++. .++.
T Consensus       369 ~~~e~~---q~l~---~~~~~~~~q~~~~~lvr~~~~d~~r~~~~~~~t~----------df~~~~~k~v~l~e~-~v~~  431 (578)
T KOG2538|consen  369 FPLEEL---QILL---ELFPHGLEQFLNQCLVRASKFDGLRLLRIFCETL----------DFEARLLKYVSLIEI-LVSQ  431 (578)
T ss_pred             CcchHH---HHHH---hcCCccHHHHHHHHHHHhccchhhHHHHhHhhhc----------cHHHHHHHHhhHHHH-HHHH
Confidence            10 000   0000   01111 1122333333332111000000123330          344889999999998 7666


Q ss_pred             cCCC---CCCcCeeeEEEeCCchhhhhhcc-CCchHHHHHHhcCCccccccC--ccCCCCCCCCCCCCChHHHHHHHhhh
Q psy177          519 YFTP---IQNMPLHEIVLFSDCHLLKKYLA-GAPRAAIHTALNNPNYYMQCD--CCKVNDPSEMLPSMPDVSLAYKLHLE  592 (608)
Q Consensus       519 ~L~p---p~~lpLhEIf~fd~~~~lr~~f~-p~PR~aIe~AL~~P~~YL~c~--cc~l~~~~~l~~tlPDtsIlYkLylE  592 (608)
                      .+-+   ++..|+||+++|++..++++.|. +.||.++|+||+||++|++|+  ||...++.-..+++||+||+||||+|
T Consensus       432 ~~l~~l~~~~~p~~e~l~f~~~~tl~q~l~s~~~RsalhTa~n~P~yyl~~e~~a~e~~~g~l~~~~aPdl~i~yKL~~E  511 (578)
T KOG2538|consen  432 SHLSGLNNDIRPVHEVLRFSSISTLRQMLKSGANRSALHTALNDPVYYLHPEMRAVEAADGRLLLPNAPDLSILYKLYLE  511 (578)
T ss_pred             hhccccccchhhHHHHHhcCchHHHHHHHhcccchhHHHHhhcCceeecccHHhhHhhhcCCcccCcCchHHHHHHHHHH
Confidence            6645   78999999999999999999999 999999999999999999999  99834444456699999999999999


Q ss_pred             cCCcccHHHHHhhhc
Q psy177          593 SATMINIHDWLQSFA  607 (608)
Q Consensus       593 sG~LINlyDW~qAF~  607 (608)
                      ||++||+|||++||.
T Consensus       512 ~~~liNl~Dw~~AF~  526 (578)
T KOG2538|consen  512 CGRLINLYDWYIAFR  526 (578)
T ss_pred             HhHHHHHHHHHHHHH
Confidence            999999999999996

>KOG2538|consensus

Probab=97.61  E-value=1.7e-05  Score=87.75  Aligned_cols=153  Identities=18%  Similarity=0.275  Sum_probs=124.2

Q ss_pred             cCCChHHHHHHHHhhCCCCcEEEEeccCCCCChhhHHHHHHHHH------------------------------------
Q psy177          129 THYDFLNFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILH------------------------------------  172 (608)
Q Consensus       129 ~~yDl~~L~~Wy~~~~~~~~LVIileD~EsFd~~VL~DlI~llS------------------------------------  172 (608)
                      .+|++..++.+-.+..+ |++|+|++|+|+|+.+||||||.+++                                    
T Consensus       184 ~s~~~~~~~~~~~~~~~-p~~V~iLkd~~sfn~nvlq~~iIil~~aKOG~h~d~E~I~~lpsfr~yvEk~~~~kaiL~~~  262 (578)
T KOG2538|consen  184 KSGVLSLLRNFDRQFVS-PADVTILKDVESFNKNVLQDFIIILSSALCLDHVDTERIRRLPSFRPYVEKNLRQKAILTLD  262 (578)
T ss_pred             hhHHHHHHhhhhhhhCC-ccceEEecchHhHhhhcccceEEEehhhhccchhhHHHHhcCCcchhhHHhhhhhhhhhhhH
Confidence            34444444444444443 89999999999999999999998865                                    


Q ss_pred             HhhccCCeEEEEccccChHHHhhhcc--------HHHHhcccceeeeecChhhHHHHHHHHHhhCCCCCcc--cCHHHHH
Q psy177          173 EYLVTLPFILILGVSTSPSIIHSTLN--------YDVISTMKIHTFYNQPSIESLNLITDNIILNNKFPLI--LHHTILE  242 (608)
Q Consensus       173 s~~~~IP~vlIfGIATsv~~~~~~Lp--------~s~~~~L~~~~F~~~~~~~~l~~I~~~~l~~~~~p~~--Lg~~v~~  242 (608)
                      .|..+.|+-++.|+.+--.+++..|.        ....-+++..++...++ ++.+.+..-.|+..+.-|.  +|+.+..
T Consensus       263 ~y~~k~~i~l~~~~~~~~~l~r~~L~~l~~~~~l~~~l~~~cL~r~i~sT~-e~~~~~~ml~fL~~d~~~t~~i~~~c~~  341 (578)
T KOG2538|consen  263 RYLKKVPIQLLEGLLYAHDLFRKILSTLDGKLNLVRALYRLCLERAILSTP-EYMDALQMLVFLKKDEFFTNFISEKCAA  341 (578)
T ss_pred             HHHHHhhHHHHhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHhcchhhhhhhHHHHHHH
Confidence            35556778888888777666666665        55666677777776666 9999999999999998788  9999999


Q ss_pred             HHHHHHhhcccCHHHHHHHHHHHHHhhhhcCchhhhhhccc
Q psy177          243 FLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNIM  283 (608)
Q Consensus       243 ~Lld~F~~~d~Sv~~fi~~LK~a~M~HFy~nPLSvL~~~~~  283 (608)
                      +|.++|+.+..+++.|+..++-++-.||-.+|+..+.....
T Consensus       342 ~lr~~~~~~l~~~~~~v~~~~~~~qq~~~~e~~q~l~~~~~  382 (578)
T KOG2538|consen  342 FLRSYFLKILGTLDSFVETLKAAIQQHFPLEELQILLELFP  382 (578)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHhccCcchHHHHHHhcCC
Confidence            99999999999999999999999999999999999876653

>PRK00411 cdc6 cell division control protein 6; Reviewed

Probab=88.19  E-value=6.6  Score=42.40  Aligned_cols=117  Identities=17%  Similarity=0.213  Sum_probs=72.2

Q ss_pred             CcEEEEeccCCCCC----hhhHHHHHHHHHHhhccCCeEEEEccccChHHHhhhccHHHHhcccceeeeecC-hhhHHHH
Q psy177          147 DKLIIALQDYESFP----CSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQP-SIESLNL  221 (608)
Q Consensus       147 ~~LVIileD~EsFd----~~VL~DlI~llSs~~~~IP~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~F~~~~-~~~~l~~  221 (608)
                      .++||+|.+++.+.    ..+|..|+.++..+.. .++. ++||+...+.... +...+.+.+....+.+++ ..+-+..
T Consensus       138 ~~~viviDE~d~l~~~~~~~~l~~l~~~~~~~~~-~~v~-vI~i~~~~~~~~~-l~~~~~s~~~~~~i~f~py~~~e~~~  214 (394)
T PRK00411        138 RVLIVALDDINYLFEKEGNDVLYSLLRAHEEYPG-ARIG-VIGISSDLTFLYI-LDPRVKSVFRPEEIYFPPYTADEIFD  214 (394)
T ss_pred             CEEEEEECCHhHhhccCCchHHHHHHHhhhccCC-CeEE-EEEEECCcchhhh-cCHHHHhcCCcceeecCCCCHHHHHH
Confidence            58999999999885    5677777765544432 2433 4466666554444 666677777666666654 3344445


Q ss_pred             HHHHHhhCCCCCcccCHHHHHHHHHHHhhcccCHHHHHHHHHHHH
Q psy177          222 ITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICI  266 (608)
Q Consensus       222 I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~d~Sv~~fi~~LK~a~  266 (608)
                      |++.-+...-.+-.+.+.+++.+..........+...+..++.|.
T Consensus       215 il~~r~~~~~~~~~~~~~~l~~i~~~~~~~~Gd~r~a~~ll~~a~  259 (394)
T PRK00411        215 ILKDRVEEGFYPGVVDDEVLDLIADLTAREHGDARVAIDLLRRAG  259 (394)
T ss_pred             HHHHHHHhhcccCCCCHhHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence            555544332113357889999998877665666655555555443

>TIGR02928 orc1/cdc6 family replication initiation protein

Probab=87.25  E-value=6.6  Score=41.86  Aligned_cols=118  Identities=15%  Similarity=0.114  Sum_probs=72.0

Q ss_pred             CcEEEEeccCCCC---ChhhHHHHHHHHHHhhccCC--eEEEEccccChHHHhhhccHHHHhcccceeeeecC-hhhHHH
Q psy177          147 DKLIIALQDYESF---PCSILNEFLLILHEYLVTLP--FILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQP-SIESLN  220 (608)
Q Consensus       147 ~~LVIileD~EsF---d~~VL~DlI~llSs~~~~IP--~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~F~~~~-~~~~l~  220 (608)
                      +++||+|.+++.+   +..+|..|+.+..  ...+|  -+.++|++..++... .+...+.+.+....+.+++ +.+-+.
T Consensus       129 ~~~vlvIDE~d~L~~~~~~~L~~l~~~~~--~~~~~~~~v~lI~i~n~~~~~~-~l~~~~~s~~~~~~i~f~p~~~~e~~  205 (365)
T TIGR02928       129 DSLIIVLDEIDYLVGDDDDLLYQLSRARS--NGDLDNAKVGVIGISNDLKFRE-NLDPRVKSSLCEEEIIFPPYDAEELR  205 (365)
T ss_pred             CeEEEEECchhhhccCCcHHHHhHhcccc--ccCCCCCeEEEEEEECCcchHh-hcCHHHhccCCcceeeeCCCCHHHHH
Confidence            6899999999999   3445555543311  22222  244556777766554 5666667777655566664 333455


Q ss_pred             HHHHHHhhCCCCCcccCHHHHHHHHHHHhhcccCHHHHHHHHHHHHH
Q psy177          221 LITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICIL  267 (608)
Q Consensus       221 ~I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~d~Sv~~fi~~LK~a~M  267 (608)
                      .|+..-+.....+-.+.+.+++++.+........+-..+..++.|.+
T Consensus       206 ~il~~r~~~~~~~~~~~~~~l~~i~~~~~~~~Gd~R~al~~l~~a~~  252 (365)
T TIGR02928       206 DILENRAEKAFYDGVLDDGVIPLCAALAAQEHGDARKAIDLLRVAGE  252 (365)
T ss_pred             HHHHHHHHhhccCCCCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            56655543221233578888888888777667777777776666554

Members of this protein family are found exclusively in the archaea. This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. Several members may be found in genome and interact with each other.

>PTZ00112 origin recognition complex 1 protein; Provisional

Probab=84.31  E-value=45  Score=41.07  Aligned_cols=130  Identities=9%  Similarity=0.168  Sum_probs=82.7

Q ss_pred             HHHHHHHHhh--CCCCcEEEEeccCCCCChhhHHHHHHHHHHhhccCC-eEEEEccccChHHHhhhccHHHHhcccceee
Q psy177          134 LNFQDYYNEI--GCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLP-FILILGVSTSPSIIHSTLNYDVISTMKIHTF  210 (608)
Q Consensus       134 ~~L~~Wy~~~--~~~~~LVIileD~EsFd~~VL~DlI~llSs~~~~IP-~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~F  210 (608)
                      +.|...+...  ..+...||+|.|++.+... =++++.-|..|...-. -+.|+||+.+.++....+| .+.++|....+
T Consensus       854 evLerLF~~L~k~~r~v~IIILDEID~L~kK-~QDVLYnLFR~~~~s~SKLiLIGISNdlDLperLdP-RLRSRLg~eeI  931 (1164)
T PTZ00112        854 KILDRLFNQNKKDNRNVSILIIDEIDYLITK-TQKVLFTLFDWPTKINSKLVLIAISNTMDLPERLIP-RCRSRLAFGRL  931 (1164)
T ss_pred             HHHHHHHhhhhcccccceEEEeehHhhhCcc-HHHHHHHHHHHhhccCCeEEEEEecCchhcchhhhh-hhhhccccccc
Confidence            4555544432  1224679999999999865 3555554545543211 2457799998887776555 66677766434


Q ss_pred             eecC-hhhHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHhhcccCHHHHHHHHHHHHH
Q psy177          211 YNQP-SIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICIL  267 (608)
Q Consensus       211 ~~~~-~~~~l~~I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~d~Sv~~fi~~LK~a~M  267 (608)
                      .+++ ..+-+..|++.-+...  .-.+.+.+++++...--.....+-..+..|+.|..
T Consensus       932 vF~PYTaEQL~dILk~RAe~A--~gVLdDdAIELIArkVAq~SGDARKALDILRrAgE  987 (1164)
T PTZ00112        932 VFSPYKGDEIEKIIKERLENC--KEIIDHTAIQLCARKVANVSGDIRKALQICRKAFE  987 (1164)
T ss_pred             cCCCCCHHHHHHHHHHHHHhC--CCCCCHHHHHHHHHhhhhcCCHHHHHHHHHHHHHh
Confidence            4443 3444444554444332  23689999999998776667888888888888875

>PF07693 KAP_NTPase: KAP family P-loop domain; InterPro: IPR011646 The KAP (after Kidins220/ARMS and PifA) family of predicted NTPases are sporadically distributed across a wide phylogenetic range in bacteria and in animals

Probab=82.76  E-value=6.7  Score=40.95  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=51.8

Q ss_pred             CCcEEEEeccCCCCChhhHHHHHHHHHHhhccCCeEEEEccccChHHHhhhccHHHHhcccceeeeecChhhHHHHHHHH
Q psy177          146 KDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYNQPSIESLNLITDN  225 (608)
Q Consensus       146 ~~~LVIileD~EsFd~~VL~DlI~llSs~~~~IP~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~F~~~~~~~~l~~I~~~  225 (608)
                      +.|+||+|.|++.|++.-.-+++..+....+-=++++|+++...  .+.+.+.     .-.+..|.-..+.++++.+|+-
T Consensus       171 ~~~iViiIDdLDR~~~~~i~~~l~~ik~~~~~~~i~~Il~~D~~--~l~~ai~-----~~~~~~~~~~~~~~yLeKiiq~  243 (325)
T PF07693_consen  171 KKRIVIIIDDLDRCSPEEIVELLEAIKLLLDFPNIIFILAFDPE--ILEKAIE-----KNYGEGFDEIDGREYLEKIIQV  243 (325)
T ss_pred             CceEEEEEcchhcCCcHHHHHHHHHHHHhcCCCCeEEEEEecHH--HHHHHHH-----hhcCcccccccHHHHHHhhcCe
Confidence            37999999999999999999999999999998889999998653  3322111     1111112334556666666655


Q ss_pred             H
Q psy177          226 I  226 (608)
Q Consensus       226 ~  226 (608)
                      -
T Consensus       244 ~  244 (325)
T PF07693_consen  244 P  244 (325)
T ss_pred             E
Confidence            3

Many of the prokaryotic KAP NTPases are encoded in plasmids and tend to undergo disruption to form pseudogenes. A unique feature of all eukaryotic and certain bacterial KAP NTPases is the presence of two or four transmembrane helices inserted into the P-loop NTPase domain. These transmembrane helices anchor KAP NTPases in the membrane such that the P-loop domain is located on the intracellular side [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	608
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.0 bits (173), Expect = 6e-13
 Identities = 85/629 (13%), Positives = 173/629 (27%), Gaps = 192/629 (30%)

Query: 79  HHDFLNFQDYYNEIGCKDKLIIVTQSDTPVESSKASDVESDEDVEVNLKKTHYDFLNFQD 138
           HH  ++F+   ++   KD  I+    D  V++    DV+ D    + L K   D +    
Sbjct: 3   HHHHMDFETGEHQYQYKD--ILSVFEDAFVDNFDCKDVQ-DMPKSI-LSKEEIDHIIMSK 58

Query: 139 YYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLN 198
             + +    +L   L   +     ++ +F+  +                          N
Sbjct: 59  --DAVSGTLRLFWTLLSKQE---EMVQKFVEEVLRI-----------------------N 90

Query: 199 YDVISTMKIHTFYNQPSIESLNLITDNIILNN---KFP---------------------- 233
           Y  + +  I T   QPS+ +   I     L N    F                       
Sbjct: 91  YKFLMS-PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 234 ---LILH------HTIL--EFLIDNFLFYDFSLHTFMKGVKICILKHISMNNINALCYNI 282
              +++        T +  +  +   +        F   +K C      +  +  L Y I
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Query: 283 MN--QTLTKQMINANM-LNEIKE-----------------LDSVAKLSIKK--------- 313
                + +    N  + ++ I+                  L +V                
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269

Query: 314 -----------LDSNGVVKYSIELFEFITNMYSSLQCLFALV-----YDLPN-----NPL 352
                      L +      S++              L          DLP      NP 
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS-LLLKYLDCRPQDLPREVLTTNPR 328

Query: 353 -----GKQLRDIYCI------VLSEKVFVESSTFKQCLQLIQFISKQELLEKC------- 394
                 + +RD          V  +K+   ++  +  L +++    +++ ++        
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKL---TTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 395 ------LQLI----QFISKQELLEKVKSIILILNQNKN-----------LKTVLEEVQKL 433
                 L LI           ++ K+    L+  Q K            LK  LE    L
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445

Query: 434 QQEIKNADTEVQIKHKNDISKLN------------LTPKSRAQLKQNLLESIKQDKLQFE 481
            + I +     +    +D+                L      + +  L   +  D   F 
Sbjct: 446 HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE-RMTLFRMVFLD---FR 501

Query: 482 FDIKREKFSIKQDKLQFEFDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLFSDCHLLK 541
           F +++ K  I+ D   +         +Q L    ++ Y     N P +E ++ +    L 
Sbjct: 502 F-LEQ-K--IRHDSTAWNASGSILNTLQQLKF--YKPYICD--NDPKYERLVNAILDFLP 553

Query: 542 KY---LAGAPRAAI-HTALNNPN--YYMQ 564
           K    L  +    +   AL   +   + +
Sbjct: 554 KIEENLICSKYTDLLRIALMAEDEAIFEE 582

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 70.3 bits (171), Expect = 1e-12
 Identities = 83/609 (13%), Positives = 173/609 (28%), Gaps = 172/609 (28%)

Query: 121 DVEVNLKKTHY-DFL--NFQDYYNEIGCKD-----KLIIALQDYESFPCSILNEFLLILH 172
           D E    +  Y D L      + +   CKD     K I++ ++ +     I+     +  
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH----IIMSKDAVSG 63

Query: 173 EYLVTLPFILIL--GVSTSPSIIHSTL--NYDVISTMKIHTFYNQPSIESLNLITDNIIL 228
              +   F  +L          +   L  NY  + +  I T   QPS+ +   I     L
Sbjct: 64  TLRL---FWTLLSKQEEMVQKFVEEVLRINYKFLMS-PIKTEQRQPSMMTRMYIEQRDRL 119

Query: 229 NN---KFP-------------------------LILH------HTIL--EFLIDNFLFYD 252
            N    F                          +++        T +  +  +   +   
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179

Query: 253 FSLHTFMKGVKICILKHISMNNINALCYNIMN--QTLTKQMINANM-LNEIKE------- 302
                F   +K C      +  +  L Y I     + +    N  + ++ I+        
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 303 ----------LDSVAKLSIKK--------------------LDSNGVVKYSIELFEFITN 332
                     L +V                           L +      S++       
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

Query: 333 MYSSLQCLFALV-----YDLPN-----NPL-----GKQLRDIYCIVLSEKVFVESSTFKQ 377
                  L          DLP      NP       + +RD              +T+  
Sbjct: 300 PDEVKS-LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD------------GLATWDN 346

Query: 378 CLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQNKNLKT-VLEEVQKLQQE 436
             + +       ++E  L +++    +++ ++    + +   + ++ T +L     +  +
Sbjct: 347 -WKHVNCDKLTTIIESSLNVLEPAEYRKMFDR----LSVFPPSAHIPTILLS---LIWFD 398

Query: 437 IKNADTEVQIKHKNDISKLNLTPKSRAQLKQNLLESIKQDKLQFEFDIKREKFSIKQDKL 496
           +  +D  V +          L   S  + KQ    +I    +  E  +K E        +
Sbjct: 399 VIKSDVMVVVNK--------LHKYSLVE-KQPKESTISIPSIYLELKVKLENEYALHRSI 449

Query: 497 QFEFDIKREKFVQYLIKNLFRNYF--------TPIQNMPLHEIVLFS----DCHLLKKYL 544
              ++I +      LI      YF          I++     + LF     D   L++ +
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH--PERMTLFRMVFLDFRFLEQKI 507

Query: 545 -----AGAPRAAIHTALNNPNYYMQ--CDCCKVNDP--SEMLPSMPDVSLAYKLHLESAT 595
                A     +I   L    +Y    CD    NDP    ++ ++ D     + +L  + 
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYKPYICD----NDPKYERLVNAILDFLPKIEENLICSK 563

Query: 596 MINIHDWLQ 604
             ++   L+
Sbjct: 564 YTDL---LR 569

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 73/531 (13%), Positives = 146/531 (27%), Gaps = 148/531 (27%)

Query: 130 HYDF-LNFQDYYNEIGCKDKLIIALQDY-ESFPCSILNEFLLILHEYLVTLPFILILGVS 187
           H DF      Y      KD L +    + ++F C  + +                     
Sbjct: 6   HMDFETGEHQY----QYKDILSVFEDAFVDNFDCKDVQDMPK------------------ 43

Query: 188 TSPSIIHSTLNYDVISTMKIHTFYNQPS-IESLNLITDNIILNNKFPLILHHTILEFLID 246
                        ++S  +I         +     +     L +K   ++   + E L  
Sbjct: 44  ------------SILSKEEIDHIIMSKDAVSGTLRLFW--TLLSKQEEMVQKFVEEVLRI 89

Query: 247 NFLFYDF---SLHTFMKGVKICILKHISMNNINALCYNIMNQTLTKQMIN-ANMLNEIKE 302
           N   Y F    + T  +   +    +I   +     YN  NQ   K  ++      ++++
Sbjct: 90  N---YKFLMSPIKTEQRQPSMMTRMYIEQRDR---LYND-NQVFAKYNVSRLQPYLKLRQ 142

Query: 303 LDSVAKLSIKKLDSNGVVKYSIELFEFITNMYSS-LQCLFALVYDLPNNPLGKQLRD-IY 360
                  ++ +L     V         I  +  S    +   V    +  +  ++   I+
Sbjct: 143 -------ALLELRPAKNV--------LIDGVLGSGKTWVALDV--CLSYKVQCKMDFKIF 185

Query: 361 CIVLSEKVFVESSTFKQCLQLIQFISKQELLEKCLQLIQFISKQELLEKVKSIILILNQN 420
            + L        +  +  LQ + +        +         +   ++     +L     
Sbjct: 186 WLNLK-NCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 421 KNLKTVLEEVQKLQ---------------QEIKNAD-------TEVQIKHKND------- 451
           +N   VL  VQ  +               +  +  D       T + + H +        
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 452 ----ISKLNLTPKS--RAQLKQNLL------ESIKQDKLQFEFDIKREKFSIKQDKLQFE 499
               +  L+  P+   R  L  N        ESI+     ++   K     +  DKL   
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN-WKH----VNCDKL--- 355

Query: 500 FDIKREKFVQYLIKNLFRNYFTPIQNMPLHEIVLF-SDCHLLKKYLAGAPRAAIHTALNN 558
                E  +  L    +R  F          + +F    H+        P   +     +
Sbjct: 356 -TTIIESSLNVLEPAEYRKMF--------DRLSVFPPSAHI--------PTILLSLIWFD 398

Query: 559 PNYY----MQCDCCK---VN-DPSEMLPSMPDVSLAYKLHLESATMINIHD 601
                   +     K   V   P E   S+P + L  K+ LE+     +H 
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN--EYALHR 447

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	608
1fnn_A	389	CDC6P, cell division control protein 6; ORC1, AAA	90.09
3te6_A	318	Regulatory protein SIR3; heterochromatin, gene sil	86.06
2qby_A	386	CDC6 homolog 1, cell division control protein 6 ho	81.56

>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20

Probab=90.09  E-value=2.4  Score=43.18  Aligned_cols=129  Identities=12%  Similarity=0.015  Sum_probs=83.3

Q ss_pred             HHHHHHHhhCCCCcEEEEeccCCCCChhhHHHHHHHHHHhhc--cCCeEEEEccccChHHHhhhccHHHHhcccceeeee
Q psy177          135 NFQDYYNEIGCKDKLIIALQDYESFPCSILNEFLLILHEYLV--TLPFILILGVSTSPSIIHSTLNYDVISTMKIHTFYN  212 (608)
Q Consensus       135 ~L~~Wy~~~~~~~~LVIileD~EsFd~~VL~DlI~llSs~~~--~IP~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~F~~  212 (608)
                      .+..+....+  .|.||+|.|++.++..++..|..++..+..  +-++.+| +++..++ +...+.....+++....+.+
T Consensus       115 ~l~~~l~~~~--~~~vlilDE~~~l~~~~~~~L~~~~~~~~~~~~~~~~iI-~~~~~~~-~~~~l~~~~~~r~~~~~i~~  190 (389)
T 1fnn_A          115 LLVEHLRERD--LYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALV-IVGHNDA-VLNNLDPSTRGIMGKYVIRF  190 (389)
T ss_dssp             HHHHHHHHTT--CCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEE-EEESSTH-HHHTSCHHHHHHHTTCEEEC
T ss_pred             HHHHHHhhcC--CeEEEEEECccccchHHHHHHHHHHHhCCCCCcCCEEEE-EEECCch-HHHHhCHHhhhcCCCceEEe
Confidence            3444444433  589999999999999999999888866654  1344333 4445555 44456667777777655666


Q ss_pred             cC-hhhHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHhhc------ccCHHHHHHHHHHHHH
Q psy177          213 QP-SIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFY------DFSLHTFMKGVKICIL  267 (608)
Q Consensus       213 ~~-~~~~l~~I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~------d~Sv~~fi~~LK~a~M  267 (608)
                      ++ +.+-+..++...+.....+-.+.+.+++.+.+.....      ...+-..+..++.+..
T Consensus       191 ~pl~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~r~~~~~l~~a~~  252 (389)
T 1fnn_A          191 SPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAY  252 (389)
T ss_dssp             CCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHHHHHH
Confidence            65 3333445555544321112367899999999887655      6777777777777665

>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}

Probab=86.06  E-value=2.7  Score=43.50  Aligned_cols=131  Identities=12%  Similarity=0.091  Sum_probs=86.9

Q ss_pred             hHHHHHHHHhh--CCCCcEEEEeccCCCCChhhHHHHHHHHHHhhc--cCCeEEEEccccChHHHhhhccHHHHhcccce
Q psy177          133 FLNFQDYYNEI--GCKDKLIIALQDYESFPCSILNEFLLILHEYLV--TLPFILILGVSTSPSIIHSTLNYDVISTMKIH  208 (608)
Q Consensus       133 l~~L~~Wy~~~--~~~~~LVIileD~EsFd~~VL~DlI~llSs~~~--~IP~vlIfGIATsv~~~~~~Lp~s~~~~L~~~  208 (608)
                      ++.|...+...  ..+.++||++.+++.|.   =++++.-+..|..  .-+ +.|.||+.+.+.....|++.+.+++..+
T Consensus       116 ~~~L~~~f~~~~~~~~~~~ii~lDE~d~l~---~q~~L~~l~~~~~~~~s~-~~vI~i~n~~d~~~~~L~~~v~SR~~~~  191 (318)
T 3te6_A          116 LEALNFYITNVPKAKKRKTLILIQNPENLL---SEKILQYFEKWISSKNSK-LSIICVGGHNVTIREQINIMPSLKAHFT  191 (318)
T ss_dssp             HHHHHHHHHHSCGGGSCEEEEEEECCSSSC---CTHHHHHHHHHHHCSSCC-EEEEEECCSSCCCHHHHHTCHHHHTTEE
T ss_pred             HHHHHHHHHHhhhccCCceEEEEecHHHhh---cchHHHHHHhcccccCCc-EEEEEEecCcccchhhcchhhhccCCce
Confidence            56777777653  22368999999999996   2455544445542  223 4566898888888888888888998776


Q ss_pred             eeeecC-hhhHHHHHHHHHhhCCC-C--------------------------------CcccCHHHHHHHHHHHhhcccC
Q psy177          209 TFYNQP-SIESLNLITDNIILNNK-F--------------------------------PLILHHTILEFLIDNFLFYDFS  254 (608)
Q Consensus       209 ~F~~~~-~~~~l~~I~~~~l~~~~-~--------------------------------p~~Lg~~v~~~Lld~F~~~d~S  254 (608)
                      .|.+++ +.+=+..|++.-+.... .                                +..+.+.+++++...--.....
T Consensus       192 ~i~F~pYt~~el~~Il~~Rl~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ai~~~A~~vA~~~GD  271 (318)
T 3te6_A          192 EIKLNKVDKNELQQMIITRLKSLLKPFHVKVNDKKEMTIYNNIREGQNQKIPDNVIVINHKINNKITQLIAKNVANVSGS  271 (318)
T ss_dssp             EEECCCCCHHHHHHHHHHHHHHHCCCEEEEECTTCCEEECCCC--------CTTEEEECEECCHHHHHHHHHHHHHHHCS
T ss_pred             EEEeCCCCHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccCHHHHHHHHHHHHhhCCh
Confidence            676665 33333444444333211 1                                1358999999999976666777


Q ss_pred             HHHHHHHHHHHHH
Q psy177          255 LHTFMKGVKICIL  267 (608)
Q Consensus       255 v~~fi~~LK~a~M  267 (608)
                      +-.-+..++.|..
T Consensus       272 ~R~Al~ilr~A~~  284 (318)
T 3te6_A          272 TEKAFKICEAAVE  284 (318)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7777777776654

>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}

Probab=81.56  E-value=7.1  Score=39.27  Aligned_cols=128  Identities=15%  Similarity=0.153  Sum_probs=76.4

Q ss_pred             HHHHHHHHhhCCCCcEEEEeccCCCCC----hhhHHHHHHHHHHhhccCCeEEEEccccChHHHhhhccHHHHhccccee
Q psy177          134 LNFQDYYNEIGCKDKLIIALQDYESFP----CSILNEFLLILHEYLVTLPFILILGVSTSPSIIHSTLNYDVISTMKIHT  209 (608)
Q Consensus       134 ~~L~~Wy~~~~~~~~LVIileD~EsFd----~~VL~DlI~llSs~~~~IP~vlIfGIATsv~~~~~~Lp~s~~~~L~~~~  209 (608)
                      +.+..+....+  .|.||+|.|++.+.    ..++..|+..+..+ ..-++.+| ++++..+... .+.....+++....
T Consensus       117 ~~l~~~l~~~~--~~~vlilDE~~~l~~~~~~~~l~~l~~~~~~~-~~~~~~~I-~~~~~~~~~~-~~~~~~~~r~~~~~  191 (386)
T 2qby_A          117 RRLVKAVRDYG--SQVVIVLDEIDAFVKKYNDDILYKLSRINSEV-NKSKISFI-GITNDVKFVD-LLDPRVKSSLSEEE  191 (386)
T ss_dssp             HHHHHHHHTCC--SCEEEEEETHHHHHHSSCSTHHHHHHHHHHSC-CC--EEEE-EEESCGGGGG-GCTTHHHHTTTTEE
T ss_pred             HHHHHHHhccC--CeEEEEEcChhhhhccCcCHHHHHHhhchhhc-CCCeEEEE-EEECCCChHh-hhCHHHhccCCCee
Confidence            33444444322  58999999999885    67777777665543 33344444 4555555433 34555667776666


Q ss_pred             eeecC-hhhHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHhhcccCHHHHHHHHHHHH
Q psy177          210 FYNQP-SIESLNLITDNIILNNKFPLILHHTILEFLIDNFLFYDFSLHTFMKGVKICI  266 (608)
Q Consensus       210 F~~~~-~~~~l~~I~~~~l~~~~~p~~Lg~~v~~~Lld~F~~~d~Sv~~fi~~LK~a~  266 (608)
                      +.+++ +.+-+..++...+.....+..+.+.+.+.+.........++...+..++.+.
T Consensus       192 i~l~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~ll~~a~  249 (386)
T 2qby_A          192 IIFPPYNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSG  249 (386)
T ss_dssp             EEECCCCHHHHHHHHHHHHHHHBCSSCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            77765 3333455555544322123567888988888866544467776666666554

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00