Psyllid ID: psy17802
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 332 | ||||||
| 242023979 | 1231 | Anion exchange protein, putative [Pedicu | 0.945 | 0.255 | 0.472 | 9e-83 | |
| 345496492 | 1307 | PREDICTED: anion exchange protein 2-like | 0.774 | 0.196 | 0.514 | 1e-79 | |
| 442631425 | 1210 | CG8177, isoform M [Drosophila melanogast | 0.846 | 0.232 | 0.463 | 3e-78 | |
| 24661916 | 1201 | CG8177, isoform B [Drosophila melanogast | 0.846 | 0.233 | 0.463 | 3e-78 | |
| 45553013 | 1166 | CG8177, isoform J [Drosophila melanogast | 0.846 | 0.240 | 0.463 | 5e-78 | |
| 46409170 | 1201 | RE24802p [Drosophila melanogaster] | 0.846 | 0.233 | 0.457 | 2e-77 | |
| 270003786 | 1188 | hypothetical protein TcasGA2_TC003062 [T | 0.493 | 0.138 | 0.666 | 4e-58 | |
| 189235156 | 1307 | PREDICTED: similar to AGAP006115-PB [Tri | 0.493 | 0.125 | 0.666 | 4e-58 | |
| 307178101 | 1422 | Anion exchange protein 2 [Camponotus flo | 0.436 | 0.101 | 0.724 | 4e-57 | |
| 383866045 | 1252 | PREDICTED: anion exchange protein 2-like | 0.388 | 0.103 | 0.703 | 6e-57 |
| >gi|242023979|ref|XP_002432408.1| Anion exchange protein, putative [Pediculus humanus corporis] gi|212517831|gb|EEB19670.1| Anion exchange protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 181/383 (47%), Positives = 230/383 (60%), Gaps = 69/383 (18%)
Query: 1 MSLQEYCSPNLTASTMMRSPVSSALLAPQRDLNFSDSESNFTNQMATISPILLETLPLPT 60
+SL EYCS ++T + V+ +LN S++ F T+ + +L +
Sbjct: 829 LSLSEYCS-DMTPHNFSQEYVNDN--DAMVNLNESNANETFREGGDTVDDFIRASLLMKE 885
Query: 61 KE--NQPNTALFCTVLALGTFLIALYLRHFRNSKFLGRSARRALGDF------------- 105
+ NQPNTALFCT+LALGTF IA YLR FRNSKFLGRSARRALGDF
Sbjct: 886 EGPVNQPNTALFCTILALGTFFIAYYLRQFRNSKFLGRSARRALGDFGVPIAIVVMVILD 945
Query: 106 --------------------------------GVPI---------AIIVMVSL------- 117
GVPI A++V + L
Sbjct: 946 YFVPSTYTEKLQVPEGLEPSKSEIRGWLISPLGVPIWVALGASGPALLVYILLFMETHIT 1005
Query: 118 DYVVPTYTEKLKVPEGLSPSNPACVATTTTIDHGTSLRPWTIAEKTLSPISWYYGQGSIE 177
+ ++ KLK G + I G PW A T+ I+ +
Sbjct: 1006 ELIIDKKDRKLKKGSGFHLD--IVILCVLNIGCGFMGAPWMCA-ATVRSIAHVSAVTVMS 1062
Query: 178 RTHAPGEKPHIIEVKEQRVSALIVATLVGISVLLSPLLRLVPMAVLFGVFLYMGISSIDG 237
RTHAPG+KPHII+VKEQR+S+L+V+ LVGISVL++PLLRLVPMAVLFGVFLYMG+SS +G
Sbjct: 1063 RTHAPGDKPHIIDVKEQRMSSLLVSALVGISVLMAPLLRLVPMAVLFGVFLYMGVSSTNG 1122
Query: 238 VQFFERLKLFLMPTKHHSQAAYVRRVATSKMHLFTIIQVLCLIVLWIVKSSSISLAFPFF 297
+QFF+RLKLF MP KHHSQA+YVRRV T KMHLFT+IQ+LCL++LW+VKS+ ISLAFPFF
Sbjct: 1123 IQFFDRLKLFFMPVKHHSQASYVRRVQTMKMHLFTLIQLLCLVILWVVKSTPISLAFPFF 1182
Query: 298 LILMLPVRAQLSHIFSPSELRAV 320
LILM+P+RAQL ++FSP+ELRA+
Sbjct: 1183 LILMVPLRAQLRYLFSPAELRAL 1205
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345496492|ref|XP_001601955.2| PREDICTED: anion exchange protein 2-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|442631425|ref|NP_001261653.1| CG8177, isoform M [Drosophila melanogaster] gi|440215570|gb|AGB94348.1| CG8177, isoform M [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|24661916|ref|NP_729547.1| CG8177, isoform B [Drosophila melanogaster] gi|24661920|ref|NP_729548.1| CG8177, isoform C [Drosophila melanogaster] gi|24661924|ref|NP_729549.1| CG8177, isoform F [Drosophila melanogaster] gi|45553015|ref|NP_996035.1| CG8177, isoform I [Drosophila melanogaster] gi|45553017|ref|NP_996036.1| CG8177, isoform H [Drosophila melanogaster] gi|23093740|gb|AAN11926.1| CG8177, isoform B [Drosophila melanogaster] gi|23093741|gb|AAN11927.1| CG8177, isoform C [Drosophila melanogaster] gi|23093742|gb|AAN11928.1| CG8177, isoform F [Drosophila melanogaster] gi|40882489|gb|AAR96156.1| RE66627p [Drosophila melanogaster] gi|45445963|gb|AAS65044.1| CG8177, isoform H [Drosophila melanogaster] gi|45445964|gb|AAS65045.1| CG8177, isoform I [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|45553013|ref|NP_996034.1| CG8177, isoform J [Drosophila melanogaster] gi|45445966|gb|AAS65047.1| CG8177, isoform J [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
| >gi|46409170|gb|AAS93742.1| RE24802p [Drosophila melanogaster] | Back alignment and taxonomy information |
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| >gi|270003786|gb|EFA00234.1| hypothetical protein TcasGA2_TC003062 [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|189235156|ref|XP_968661.2| PREDICTED: similar to AGAP006115-PB [Tribolium castaneum] | Back alignment and taxonomy information |
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| >gi|307178101|gb|EFN66928.1| Anion exchange protein 2 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|383866045|ref|XP_003708482.1| PREDICTED: anion exchange protein 2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 332 | ||||||
| FB|FBgn0036043 | 1268 | CG8177 [Drosophila melanogaste | 0.493 | 0.129 | 0.490 | 7.9e-71 | |
| UNIPROTKB|F1PWK0 | 1030 | SLC4A3 "Uncharacterized protei | 0.490 | 0.158 | 0.455 | 2.6e-58 | |
| UNIPROTKB|F1PZ52 | 1237 | SLC4A3 "Uncharacterized protei | 0.490 | 0.131 | 0.455 | 5.1e-58 | |
| UNIPROTKB|E1BKK3 | 1226 | E1BKK3 "Uncharacterized protei | 0.490 | 0.132 | 0.455 | 8.1e-58 | |
| UNIPROTKB|I3LJ89 | 1005 | SLC4A3 "Uncharacterized protei | 0.472 | 0.156 | 0.471 | 8.3e-58 | |
| UNIPROTKB|P48751 | 1232 | SLC4A3 "Anion exchange protein | 0.490 | 0.132 | 0.455 | 1e-57 | |
| UNIPROTKB|F1LPE6 | 1067 | Slc4a2 "Anion exchange protein | 0.503 | 0.156 | 0.473 | 1.4e-57 | |
| MGI|MGI:109350 | 1227 | Slc4a3 "solute carrier family | 0.490 | 0.132 | 0.449 | 2.2e-57 | |
| UNIPROTKB|F1LP17 | 1225 | Slc4a2 "Anion exchange protein | 0.503 | 0.136 | 0.473 | 2.4e-57 | |
| RGD|3711 | 1234 | Slc4a2 "solute carrier family | 0.503 | 0.135 | 0.473 | 2.5e-57 |
| FB|FBgn0036043 CG8177 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 7.9e-71, Sum P(2) = 7.9e-71
Identities = 81/165 (49%), Positives = 113/165 (68%)
Query: 156 PWTIAEKTLSPISWYYGQGSIERTHAPGEKPHIIEVKEQRVSALIVATLVGIXXXXXXXX 215
PW A T+ ++ + RTHAPGE P I++VKEQR+S V ++G+
Sbjct: 1082 PWHCAA-TVRSVTHVSSVTIMSRTHAPGESPRIVDVKEQRLSGFFVCLMIGLSVLMAPLL 1140
Query: 216 XXXXMAVLFGVFLYMGISSIDGVQFFERLKLFLMPTKHHSQAAYVRRVATSKMHLFTIIQ 275
MAVLFGVFLYMG++S+ GVQ FER++L+ MP KH+ +YV+R+ K+HLFT IQ
Sbjct: 1141 RLIPMAVLFGVFLYMGVASMSGVQLFERIRLYFMPVKHYPPTSYVKRLRPWKLHLFTTIQ 1200
Query: 276 VLCLIVLWIVKSSSISLAFPFFLILMLPVRAQLSHIFSPSELRAV 320
VLCL++LW VKSS SLAFPFFLI+M+P+R L+ ++ P E++A+
Sbjct: 1201 VLCLVLLWSVKSSQFSLAFPFFLIMMVPIRQNLTKLYKPEEMQAL 1245
|
|
| UNIPROTKB|F1PWK0 SLC4A3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PZ52 SLC4A3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BKK3 E1BKK3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LJ89 SLC4A3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P48751 SLC4A3 "Anion exchange protein 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1LPE6 Slc4a2 "Anion exchange protein 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| MGI|MGI:109350 Slc4a3 "solute carrier family 4 (anion exchanger), member 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1LP17 Slc4a2 "Anion exchange protein 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| RGD|3711 Slc4a2 "solute carrier family 4 (anion exchanger), member 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 332 | |||
| TIGR00834 | 900 | TIGR00834, ae, anion exchange protein | 3e-58 | |
| pfam00955 | 501 | pfam00955, HCO3_cotransp, HCO3- transporter family | 6e-47 | |
| pfam00955 | 501 | pfam00955, HCO3_cotransp, HCO3- transporter family | 4e-33 | |
| TIGR00834 | 900 | TIGR00834, ae, anion exchange protein | 2e-25 |
| >gnl|CDD|233143 TIGR00834, ae, anion exchange protein | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 3e-58
Identities = 81/140 (57%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Query: 181 APGEKPHIIEVKEQRVSALIVATLVGISVLLSPLLRLVPMAVLFGVFLYMGISSIDGVQF 240
APGEK I EV+EQRV+ L+VA LVG+S+L+ P+L+ +P+AVLFG+FLYMG++S+ G+Q
Sbjct: 736 APGEKAQIQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYMGVTSLSGIQL 795
Query: 241 FERLKLFLMPTKHHSQAAYVRRVATSKMHLFTIIQVLCLIVLWIVKSSSISLAFPFFLIL 300
F+RL L LMP K+H YVRRV T +MHLFT IQ+LCL +LW+VKS+ SLAFPF LIL
Sbjct: 796 FDRLLLLLMPPKYHPDVPYVRRVKTWRMHLFTAIQILCLALLWVVKSTPASLAFPFVLIL 855
Query: 301 MLPVR-AQLSHIFSPSELRA 319
+P+R L +F+ EL+
Sbjct: 856 TVPLRRLLLPRLFTERELKC 875
|
The Anion Exchanger (AE) Family (TC 2.A.31)Characterized protein members of the AE family are found only in animals.They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule [Transport and binding proteins, Anions]. Length = 900 |
| >gnl|CDD|216212 pfam00955, HCO3_cotransp, HCO3- transporter family | Back alignment and domain information |
|---|
| >gnl|CDD|216212 pfam00955, HCO3_cotransp, HCO3- transporter family | Back alignment and domain information |
|---|
| >gnl|CDD|233143 TIGR00834, ae, anion exchange protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 332 | |||
| TIGR00834 | 900 | ae anion exchange protein. They preferentially cat | 100.0 | |
| KOG1172|consensus | 876 | 100.0 | ||
| PF00955 | 510 | HCO3_cotransp: HCO3- transporter family Only parti | 100.0 | |
| COG0659 | 554 | SUL1 Sulfate permease and related transporters (MF | 95.28 | |
| PF00916 | 280 | Sulfate_transp: Sulfate transporter family; InterP | 90.57 | |
| TIGR00815 | 563 | sulP high affinity sulphate transporter 1. (2) SO4 | 90.35 | |
| PRK11660 | 568 | putative transporter; Provisional | 88.92 |
| >TIGR00834 ae anion exchange protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=652.14 Aligned_cols=265 Identities=48% Similarity=0.854 Sum_probs=251.8
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCCchhhhhhhhccchhHHHHHhhhhccccc-cccceeecCCCCCCCCC
Q psy17802 61 KENQPNTALFCTVLALGTFLIALYLRHFRNSKFLGRSARRALGDFGVPIAIIVMVSLDYVVP-TYTEKLKVPEGLSPSNP 139 (332)
Q Consensus 61 ~~~~p~~allSliL~lgT~~~a~~L~~f~~S~ff~~~vR~~lsDfg~~isVl~~t~~~~~~~-~~~~kL~vp~~f~pt~~ 139 (332)
+.++||++++|+++++|||+++++|++||+|+||++++|++++|||++|||++|++++|.++ ++++|++||++|+||++
T Consensus 554 c~~~~~~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v~~~kl~Vp~~f~pt~p 633 (900)
T TIGR00834 554 CRFQPNTALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDTYTQKLSVPSGLKVTNP 633 (900)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccCcccccCCCCCcCCCCC
Confidence 44589999999999999999999999999999999999999999999999999999999887 89999999999999975
Q ss_pred c----------------------ceeeee---------------eecC-------------------------CCCCCCC
Q psy17802 140 A----------------------CVATTT---------------TIDH-------------------------GTSLRPW 157 (332)
Q Consensus 140 ~----------------------a~iPAl---------------ivnr-------------------------G~lGLPw 157 (332)
. |++||+ |+|| |.+||||
T Consensus 634 ~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw 713 (900)
T TIGR00834 634 SARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPW 713 (900)
T ss_pred CCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCc
Confidence 1 456665 3332 3399999
Q ss_pred cCCccCCccccccccCcccccccCCCCCCeeeeEeeeeehhhHHHHHHHHHHhhhhhcCccchhhhhhhhhhhhccccCc
Q psy17802 158 TIAEKTLSPISWYYGQGSIERTHAPGEKPHIIEVKEQRVSALIVATLVGISVLLSPLLRLVPMAVLFGVFLYMGISSIDG 237 (332)
Q Consensus 158 ~~~a~~p~S~~Hv~sL~~~~~~~~~G~~~~i~~V~EqRvS~l~~~lLigls~~l~PvL~~IP~aVL~GlFlyMG~~sL~G 237 (332)
+|||+ |||++|++||+++++..++||++++++|+||||||+++|+|+|+|++++|+|++||+|||||+|+|||++||+|
T Consensus 714 ~~aat-v~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aVL~GvFlYMGv~SL~G 792 (900)
T TIGR00834 714 LSAAT-VRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAVLFGIFLYMGVTSLSG 792 (900)
T ss_pred ccccC-CcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhccc
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhCCCCCCCCcccccccccchhHHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHHHHHHhhh-cCCCChhh
Q psy17802 238 VQFFERLKLFLMPTKHHSQAAYVRRVATSKMHLFTIIQVLCLIVLWIVKSSSISLAFPFFLILMLPVRAQL-SHIFSPSE 316 (332)
Q Consensus 238 nqi~~Ri~ll~~~~k~~p~~~~lr~Vp~~~ihlFT~iQ~~~l~~l~~i~~t~aai~FPv~Ii~LVPiR~~l-Pr~F~~~e 316 (332)
||||+|++++|||+|++|+++|+|+||+||||+||++|++|++++|+||+|++||+||++|+++||+|+++ ||+|+++|
T Consensus 793 nQ~~~Ri~llf~p~k~~P~~~ylr~Vp~~kihlFT~iQl~cl~~l~~ik~t~aai~FP~~iillVpiR~~llp~~F~~~e 872 (900)
T TIGR00834 793 IQLFDRLLLLLMPPKYHPDVPYVRRVKTWRMHLFTAIQILCLALLWVVKSTPASLAFPFVLILTVPLRRLLLPRLFTERE 872 (900)
T ss_pred CHHHHHHHHHhcCcccCCCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHHHHhhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 99999999
Q ss_pred hhhhcCCCCC
Q psy17802 317 LRAVLLNLTP 326 (332)
Q Consensus 317 L~~LD~~~~~ 326 (332)
|++||+++++
T Consensus 873 L~~LD~~d~~ 882 (900)
T TIGR00834 873 LKCLDKEDAK 882 (900)
T ss_pred HhhhCccccc
Confidence 9999988775
|
They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule. |
| >KOG1172|consensus | Back alignment and domain information |
|---|
| >PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells | Back alignment and domain information |
|---|
| >COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related | Back alignment and domain information |
|---|
| >TIGR00815 sulP high affinity sulphate transporter 1 | Back alignment and domain information |
|---|
| >PRK11660 putative transporter; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 332 | |||
| 1bh7_A | 33 | BAND 3; membrane protein, cytoplasmic loop, anion | 2e-11 |
| >1bh7_A BAND 3; membrane protein, cytoplasmic loop, anion exchange protein; NMR {Homo sapiens} SCOP: j.35.1.1 Length = 33 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 2e-11
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 238 VQFFERLKLFLMPTKHHSQAAYVRRVATSKMHL 270
+Q F+R+ L P K+H YV+RV T +MHL
Sbjct: 1 IQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHL 33
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 332 | |||
| 1bh7_A | 33 | BAND 3; membrane protein, cytoplasmic loop, anion | 99.03 |
| >1bh7_A BAND 3; membrane protein, cytoplasmic loop, anion exchange protein; NMR {Homo sapiens} SCOP: j.35.1.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=7.3e-12 Score=82.47 Aligned_cols=33 Identities=45% Similarity=0.845 Sum_probs=29.7
Q ss_pred hhHHHHHHHhhCCCCCCCCcccccccccchhHH
Q psy17802 238 VQFFERLKLFLMPTKHHSQAAYVRRVATSKMHL 270 (332)
Q Consensus 238 nqi~~Ri~ll~~~~k~~p~~~~lr~Vp~~~ihl 270 (332)
.|||||++++|||+|++||.+|+|+||+||||+
T Consensus 1 iQ~~~Ri~L~fmp~k~~P~~~Yvr~Vp~~r~Hl 33 (33)
T 1bh7_A 1 IQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHL 33 (33)
T ss_dssp CCCTTTTCC-CCCSSCCCC-CCCCTTHHHHHTC
T ss_pred CcHHHHHHHHcCCcccCCCCceEEEcceeeeeC
Confidence 489999999999999999999999999999995
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00