Psyllid ID: psy17858

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
Secondary Structure (PSIPRED)
cEEEEEEcccccEEEEEEEEEEEEEccccccccccccEEEEEEcEEEEEEEEEEEEEccccEEEEEEccccccEEEEEEEEEccccccEEEEEEEcccccccEEEEEEEEEEcccccEEEEEEEEEEcEEEEEEEcEEEEEcccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEcccccccccEEEEEEEEccccHHHHcccccEEEEEcccEccccEEEEEEcccccccEEEcccccccEEEEEEccccccccEEEEEEEEccccccEEEEEEEEEEEccccHHHEEEEEEcccccHHEcccEEEccccccccEEEEEcccc
Coil and Loop (DISEMBL)
MLKLLRLVgttgnmncfSFQARVKKHRWYgkilksgnpvimsvgwrrfqtlpiyskqednmryrmlkytPQHVACMahfwgpitrsgtgflavqdvakrepgfrviatgtildanqtAEVTKKLkltgvpmkiyKKTAFIKDMFNSTLEVAKFEGLR
Flexible Loop (DISEMBL)
mlkllrlvgttgnmncfsfQARVKKHRWYGKilksgnpvimsvgwRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIAtgtildanqtaevtkklkltgvpmkiyKKTAFIKDMFNSTLevakfeglr
Low Complexity Region (SEG)
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
Disordered region (IsUnstruct)
***LLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVA******
Disordered Region (DISOPRED)
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
Disordered Region (DISEMBL)
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
Disordered Region (DISPRO)
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q14692	1282	Ribosome biogenesis prote	yes	N/A	0.949	0.116	0.602	7e-49
O94653	1121	Ribosome biogenesis prote	yes	N/A	0.866	0.121	0.553	1e-43
Q08965	1183	Ribosome biogenesis prote	yes	N/A	0.866	0.114	0.536	7e-38
A8MV67	101	Putative BMS1-like protei	no	N/A	0.477	0.742	0.571	3e-19
A8MTN0	101	Putative BMS1-like protei	no	N/A	0.477	0.742	0.558	2e-18
A8MXU9	101	Putative BMS1-like protei	no	N/A	0.477	0.742	0.545	3e-18
Q9VP47	814	Pre-rRNA-processing prote	no	N/A	0.783	0.151	0.296	1e-08
Q5XGY1	815	Pre-rRNA-processing prote	N/A	N/A	0.757	0.146	0.268	3e-08
Q54YA7	826	Pre-rRNA-processing prote	no	N/A	0.751	0.142	0.338	4e-08
O13956	783	Ribosome biogenesis prote	no	N/A	0.866	0.173	0.246	7e-07

>sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1

 Score =  192 bits (488), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 91/151 (60%), Positives = 113/151 (74%), Gaps = 2/151 (1%)

Query: 7    LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
            ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct: 908  ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 967

Query: 65   MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
            +LKYTPQH+ C A FWGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKL
Sbjct: 968  LLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 1027

Query: 125  KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
            KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct: 1028 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1058

May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus.
Homo sapiens (taxid: 9606)

>sp|O94653|BMS1_SCHPO Ribosome biogenesis protein bms1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bms1 PE=1 SV=2

 Score =  175 bits (443), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 77/139 (55%), Positives = 103/139 (74%), Gaps = 3/139 (2%)

Query: 20  QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
           Q R+K+HRW+ KILK+ +P+I S+GWRRFQ++P+YS  +   R RMLKYTP+H+ C   F
Sbjct: 763 QVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHCFGTF 822

Query: 80  WGPITRSGTGFLAVQDVAK---REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKK 136
           +GP     +GF AVQ VA    +   FR+ ATG++L+ +Q+ ++ KKLKLTGVP KI+K 
Sbjct: 823 YGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVLNIDQSTDIVKKLKLTGVPYKIFKN 882

Query: 137 TAFIKDMFNSTLEVAKFEG 155
           TAFIK MF+S LEVAKFEG
Sbjct: 883 TAFIKKMFSSPLEVAKFEG 901

May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q08965|BMS1_YEAST Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1

 Score =  155 bits (393), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 100/138 (72%), Gaps = 2/138 (1%)

Query: 20  QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
           +AR+++HRW+ KILK+ +P+++S+GWRRFQTLPIY+  +   R RMLKYTP+H  C A F
Sbjct: 826 KARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAF 885

Query: 80  WGPITRSGTGFLAVQDVAKREP--GFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKT 137
           +GP+    T F  VQ VA  +   GFR+ ATG + + +   E+ KKLKL G P KI+K T
Sbjct: 886 YGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFKNT 945

Query: 138 AFIKDMFNSTLEVAKFEG 155
           AFIKDMF+S +EVA+FEG
Sbjct: 946 AFIKDMFSSAMEVARFEG 963

May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus. The depletion of BMS1 interferes with processing of the 35S pre-rRNA at sites A0, A1, and A2, and the formation of 40S subunits.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|A8MV67|YO021_HUMAN Putative BMS1-like protein ENSP00000383088 OS=Homo sapiens PE=5 SV=1

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 7   LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
           ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct: 25  ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 84

Query: 65  MLKYTPQHVACMAHFWG 81
           +LKYTPQH+ C A FW 
Sbjct: 85  LLKYTPQHMHCGAAFWA 101

Homo sapiens (taxid: 9606)

>sp|A8MTN0|YI027_HUMAN Putative BMS1-like protein ENSP00000382360 OS=Homo sapiens PE=5 SV=1

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 7   LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
           ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+ +Y  ++ N R R
Sbjct: 25  ILGGLGNSEGNVGHVQMRLKKHRWYKKILKSQDPIIFSVGWRRFQTILLYYIEDHNGRQR 84

Query: 65  MLKYTPQHVACMAHFWG 81
           +LKYTPQH+ C A FW 
Sbjct: 85  LLKYTPQHIHCGAAFWA 101

Homo sapiens (taxid: 9606)

>sp|A8MXU9|YO022_HUMAN Putative BMS1-like protein ENSP00000383048 OS=Homo sapiens PE=5 SV=1

 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 7   LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
           ++G  GN   N    +  +KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct: 25  ILGGLGNSEGNVGYVEMHLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 84

Query: 65  MLKYTPQHVACMAHFWG 81
           +LKYTPQH+ C A FW 
Sbjct: 85  LLKYTPQHMHCGAAFWA 101

Homo sapiens (taxid: 9606)

>sp|Q9VP47|TSR1_DROME Pre-rRNA-processing protein TSR1 homolog OS=Drosophila melanogaster GN=CG7338 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 2/125 (1%)

Query: 33  LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLA 92
           LKS   +I+  G+RRF   PIYS+  +  +++  +Y   +    A F+ PI       LA
Sbjct: 614 LKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFPPAPVLA 673

Query: 93  VQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAK 152
            +     +    ++A G +L  N    V K++ L+G PM+I +K+A I+ MF    +V  
Sbjct: 674 FK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVEY 731

Query: 153 FEGLR 157
           F+ ++
Sbjct: 732 FKPVK 736

Required during maturation of the 40S ribosomal subunit in the nucleolus.

Drosophila melanogaster (taxid: 7227)

>sp|Q5XGY1|TSR1_XENLA Pre-rRNA-processing protein TSR1 homolog OS=Xenopus laevis GN=tsr1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 23  VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
           V++H    + +K+   +I   G+RRF+  P++S+     +++  ++     + +   + P
Sbjct: 609 VRRHPGNNEPIKAKEELIFHCGFRRFRASPLFSQHSSADKHKSERFLRSDTSVVVTVYAP 668

Query: 83  ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
           IT      L  +   +R  G + ++ATG++L+ N    V K++ L+G P KI K+TA ++
Sbjct: 669 ITFPPASVLVFK---QRYNGMQDLVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVR 725

Query: 142 DMF 144
            MF
Sbjct: 726 YMF 728

Required during maturation of the 40S ribosomal subunit in the nucleolus.

Xenopus laevis (taxid: 8355)

>sp|Q54YA7|TSR1_DICDI Pre-rRNA-processing protein TSR1 homolog OS=Dictyostelium discoideum GN=tsr1 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 6/124 (4%)

Query: 23  VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNM-RYRMLKYTPQHVACMAHFWG 81
           V+KH+ Y + ++S   V    GWR+F T PIYS    N  + +  K+       MA  +G
Sbjct: 636 VEKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMATIYG 695

Query: 82  PITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMK-IYKKTAFI 140
           PIT      L        E    ++ATG +   N    + K++ LTGV  K I KK   +
Sbjct: 696 PITYPPAPLLIFNGKDCNE----LVATGYLSSVNPDRIICKRIILTGVIAKSISKKFVTV 751

Query: 141 KDMF 144
           KDMF
Sbjct: 752 KDMF 755

Required during maturation of the 40S ribosomal subunit in the nucleolus.

Dictyostelium discoideum (taxid: 44689)

>sp|O13956|TSR1_SCHPO Ribosome biogenesis protein tsr1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H4.15 PE=3 SV=1

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 6/142 (4%)

Query: 20  QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE----DNMRYRMLKYTPQHVAC 75
           Q    +H  Y + ++S   +++ +G RRF   P+YS        N   +  +Y P   A 
Sbjct: 586 QFTAMQHSEYEEPIESKEELLLQIGPRRFMVRPLYSDPTASGASNNLQKYHRYLPPKQAV 645

Query: 76  MAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYK 135
           +A    PI       +  +  +  +   R+ ATG+ ++ +  + + K+  LTG P K++K
Sbjct: 646 IASVISPIVFGNVPIIMFKKSS--DNSLRLAATGSYVNCDTNSVIAKRAVLTGHPFKVHK 703

Query: 136 KTAFIKDMFNSTLEVAKFEGLR 157
           K   I+ MF +  +V  F+ ++
Sbjct: 704 KLVTIRYMFFNPEDVIWFKPIQ 725

Required for 40S ribosomal subunit synthesis. Required for normal export of the pre-40S particles from the nucleus to the cytoplasm.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
307205546	1268	Ribosome biogenesis protein BMS1-like pr	0.929	0.115	0.739	7e-62
322782539	1224	hypothetical protein SINV_80643 [Solenop	0.929	0.119	0.732	1e-61
328786694	1219	PREDICTED: hypothetical protein LOC41404	0.929	0.119	0.732	2e-60
193598807	1225	PREDICTED: hypothetical protein LOC10016	0.936	0.12	0.700	2e-60
332021539	1239	Ribosome biogenesis protein BMS1-like pr	0.929	0.117	0.705	6e-60
350423434	1260	PREDICTED: hypothetical protein LOC10074	0.929	0.115	0.712	1e-59
307173636	1184	Ribosome biogenesis protein BMS1-like pr	0.929	0.123	0.705	2e-59
383863223	1238	PREDICTED: uncharacterized protein LOC10	0.929	0.117	0.698	1e-58
345488166	1270	PREDICTED: hypothetical protein LOC10012	0.929	0.114	0.719	1e-58
340719399	1258	PREDICTED: hypothetical protein LOC10064	0.929	0.116	0.698	1e-58

>gi|307205546|gb|EFN83851.1| Ribosome biogenesis protein BMS1-like protein [Harpegnathos saltator]

 Score =  241 bits (615), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 108/146 (73%), Positives = 124/146 (84%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    QARVKKHRWY +ILKS NP+I SVGWRRFQ+LPIYSK EDN+R RMLKYTP+
Sbjct: 908  GEENIGYVQARVKKHRWYSRILKSRNPLIFSVGWRRFQSLPIYSKLEDNLRQRMLKYTPE 967

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACM+H WGPIT  GTG LAVQDVA REPGFR+ ATG++++ +++ +V KKLKLTGVPM
Sbjct: 968  HVACMSHLWGPITPQGTGILAVQDVASREPGFRIAATGSVVEMDKSTQVVKKLKLTGVPM 1027

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIY+KTAFIKDMFNS LEVAKFEG R
Sbjct: 1028 KIYRKTAFIKDMFNSALEVAKFEGAR 1053

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322782539|gb|EFZ10488.1| hypothetical protein SINV_80643 [Solenopsis invicta]

 Score =  240 bits (613), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 125/146 (85%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY KILKS +P+I S+GWRRFQ+LPIYSK EDN+R+RMLKYTP+
Sbjct: 879  GEENIGYVQTRIKKHRWYSKILKSRDPLIFSIGWRRFQSLPIYSKLEDNLRHRMLKYTPE 938

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACM HFWGPIT  GTG L VQDVA REPGFRV+ATG+I++ +++ +V KKLKLTGVPM
Sbjct: 939  HVACMGHFWGPITPQGTGVLVVQDVATREPGFRVVATGSIVELDKSTQVVKKLKLTGVPM 998

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIY+KTAFIKDMFNS+LEVAKFEG R
Sbjct: 999  KIYRKTAFIKDMFNSSLEVAKFEGAR 1024

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786694|ref|XP_397483.4| PREDICTED: hypothetical protein LOC414048 [Apis mellifera]

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 107/146 (73%), Positives = 124/146 (84%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY KILKS +P+I+SVGWRRFQTLPI+SK EDN+R RMLKYTP+
Sbjct: 861  GEENIGYVQTRIKKHRWYSKILKSKDPLILSVGWRRFQTLPIFSKLEDNLRNRMLKYTPE 920

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACMAHFWGPIT  GTG LAVQDVA R PGFR+ ATG+I++ +++ ++ KKLKLTGVPM
Sbjct: 921  HVACMAHFWGPITPQGTGVLAVQDVATRIPGFRIAATGSIVEMDKSTQIMKKLKLTGVPM 980

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIYKKTAFIKDMFNS LEVAKFEG +
Sbjct: 981  KIYKKTAFIKDMFNSPLEVAKFEGAK 1006

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193598807|ref|XP_001951128.1| PREDICTED: hypothetical protein LOC100169539 [Acyrthosiphon pisum]

 Score =  236 bits (602), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 127/147 (86%)

Query: 11   TGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTP 70
            +G  N    + R+KKHRWY KILK+ +PVI+S+GWRRFQTLPI+SKQEDNMR+RMLKYTP
Sbjct: 871  SGEENIGFLKVRIKKHRWYNKILKNRDPVIISMGWRRFQTLPIFSKQEDNMRHRMLKYTP 930

Query: 71   QHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVP 130
            +HV CMAHFWGP+TR GTGFL VQ+++ ++ GFR+ ATGT++D +Q+ +VTKKLKLTG P
Sbjct: 931  EHVMCMAHFWGPMTRPGTGFLTVQNLSTQQAGFRITATGTVVDTDQSTQVTKKLKLTGSP 990

Query: 131  MKIYKKTAFIKDMFNSTLEVAKFEGLR 157
            +KIYK+TAFIKDMFNSTLEV KFEG R
Sbjct: 991  LKIYKRTAFIKDMFNSTLEVTKFEGAR 1017

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021539|gb|EGI61904.1| Ribosome biogenesis protein BMS1-like protein [Acromyrmex echinatior]

 Score =  234 bits (598), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 124/146 (84%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY +ILKS +P+I S+GWRRFQ+LPIYSK EDN+R+RMLKYTP+
Sbjct: 881  GEENIGYVQTRIKKHRWYSRILKSRDPLIFSIGWRRFQSLPIYSKLEDNLRHRMLKYTPE 940

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACM+H WGPIT  GTG LAVQDVA +EPGFR++ATG+I++ +++ EV KKLKL GVPM
Sbjct: 941  HVACMSHLWGPITPQGTGVLAVQDVASKEPGFRIVATGSIVELDKSTEVMKKLKLIGVPM 1000

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KI++KTAFIKDMFNS LEVAKFEG R
Sbjct: 1001 KIHRKTAFIKDMFNSALEVAKFEGAR 1026

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423434|ref|XP_003493481.1| PREDICTED: hypothetical protein LOC100743997 [Bombus impatiens]

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 123/146 (84%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY KILKS +P+I+SVGWRRFQTLPI+SK EDN++ RMLKYTP+
Sbjct: 903  GEENIGYVQTRIKKHRWYSKILKSKDPLILSVGWRRFQTLPIFSKLEDNLKNRMLKYTPE 962

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            H+ACMAHFWGP+T   TG LAVQDVA R PGFR+ ATG+I++ +++ ++ KKLKLTGVPM
Sbjct: 963  HIACMAHFWGPVTPQSTGILAVQDVATRVPGFRIAATGSIVEMDKSTQIMKKLKLTGVPM 1022

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIYKKTAFIKDMFNS LEVAKFEG R
Sbjct: 1023 KIYKKTAFIKDMFNSALEVAKFEGAR 1048

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173636|gb|EFN64487.1| Ribosome biogenesis protein BMS1-like protein [Camponotus floridanus]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 103/146 (70%), Positives = 124/146 (84%)

Query: 12  GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
           G  N    QAR+KKHRWY KILKS +P+I S+GWRRFQ+LPIY+K EDN+R+RMLKYTP+
Sbjct: 826 GEENIGYVQARIKKHRWYSKILKSRDPLIFSLGWRRFQSLPIYTKLEDNLRHRMLKYTPE 885

Query: 72  HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
           HVAC++HFWGPIT   TG LAVQDVA R+PGFR+ ATG+I++ +++  V KKLKLTGVP+
Sbjct: 886 HVACISHFWGPITPQSTGILAVQDVATRQPGFRIAATGSIVELDKSTHVVKKLKLTGVPL 945

Query: 132 KIYKKTAFIKDMFNSTLEVAKFEGLR 157
           KIY+KTAFIKDMFNS LEVAKFEG R
Sbjct: 946 KIYRKTAFIKDMFNSALEVAKFEGAR 971

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863223|ref|XP_003707081.1| PREDICTED: uncharacterized protein LOC100876332 [Megachile rotundata]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 123/146 (84%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY KILKS +P+I+S+GWRRFQTLPI+SK EDN++ RMLKYTP+
Sbjct: 880  GEENIGYVQTRIKKHRWYSKILKSKDPLILSIGWRRFQTLPIFSKLEDNLKNRMLKYTPE 939

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACMAHFWGPIT   TG LA+QDVA R PGFR+ ATG+I++ +++ ++ KKLKLTGVP+
Sbjct: 940  HVACMAHFWGPITPQSTGVLAIQDVATRIPGFRIAATGSIVEMDKSTQIMKKLKLTGVPL 999

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIYKKTAFIKDMFNS LEVAKFEG +
Sbjct: 1000 KIYKKTAFIKDMFNSVLEVAKFEGAK 1025

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345488166|ref|XP_001605043.2| PREDICTED: hypothetical protein LOC100121428 [Nasonia vitripennis]

 Score =  230 bits (587), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 105/146 (71%), Positives = 122/146 (83%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q RVKKHRWY +ILKS +P+I+SVGWRRFQT+ I+SK EDN+R RMLKYTP+
Sbjct: 908  GEENIGYVQTRVKKHRWYSRILKSKDPLILSVGWRRFQTMAIFSKLEDNLRNRMLKYTPE 967

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            HVACMAHFWGPIT   TG LAVQDV+KREPGFR+ ATGTI++ +++ +V KKLKLTGVP 
Sbjct: 968  HVACMAHFWGPITPQNTGVLAVQDVSKREPGFRIAATGTIVELDKSTKVVKKLKLTGVPY 1027

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIYKKTAFIKDMF S LEVAKFEG +
Sbjct: 1028 KIYKKTAFIKDMFTSALEVAKFEGAK 1053

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719399|ref|XP_003398141.1| PREDICTED: hypothetical protein LOC100649776 [Bombus terrestris]

 Score =  230 bits (586), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 122/146 (83%)

Query: 12   GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
            G  N    Q R+KKHRWY KILKS +P+I+SVGWRRFQTLP++SK EDN++ RMLKYTP+
Sbjct: 890  GEENIGYVQTRIKKHRWYPKILKSKDPLILSVGWRRFQTLPVFSKLEDNLKNRMLKYTPE 949

Query: 72   HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
            H+ACMAHFWGP+T   TG LAVQDVA R PGFR+ ATG+I++ +++ ++ KKLKLTG PM
Sbjct: 950  HIACMAHFWGPVTPQSTGVLAVQDVATRVPGFRIAATGSIVEMDKSTQIMKKLKLTGFPM 1009

Query: 132  KIYKKTAFIKDMFNSTLEVAKFEGLR 157
            KIYKKTAFIKDMFNS LEVAKFEG R
Sbjct: 1010 KIYKKTAFIKDMFNSALEVAKFEGAR 1035

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
RGD|1308043	392	Bms1 "BMS1 homolog, ribosome a	0.866	0.346	0.647	1.6e-45
UNIPROTKB|F1RG23	399	BMS1 "Uncharacterized protein"	0.949	0.373	0.596	2.1e-45
UNIPROTKB|F1PKN2	1287	BMS1 "Uncharacterized protein"	0.949	0.115	0.615	9.2e-45
UNIPROTKB|E1BPP2	1290	BMS1 "Uncharacterized protein"	0.949	0.115	0.609	9.2e-45
UNIPROTKB|Q14692	1282	BMS1 "Ribosome biogenesis prot	0.949	0.116	0.602	1.9e-44
UNIPROTKB|E9PTV4	1282	Bms1 "Protein Bms1" [Rattus no	0.866	0.106	0.647	3.1e-44
UNIPROTKB|F1NH69	1304	BMS1 "Uncharacterized protein"	0.949	0.114	0.596	6.8e-44
FB|FBgn0036686	1159	CG7728 [Drosophila melanogaste	0.898	0.121	0.596	1.4e-43
WB|WBGene00022021	1055	Y61A9LA.10 [Caenorhabditis ele	0.917	0.136	0.583	6.4e-43
ASPGD|ASPL0000005995	1179	AN6334 [Emericella nidulans (t	0.866	0.115	0.588	5.9e-42

RGD|1308043 Bms1 "BMS1 homolog, ribosome assembly protein (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query:    20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
             Q R+KKHRWY KILKS +PVI SVGWRRFQT+P+Y  ++ N R R+LKYTPQH+ C A F
Sbjct:    35 QMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATF 94

Query:    80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
             WGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKLKLTG P KI+K T+F
Sbjct:    95 WGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSF 154

Query:   140 IKDMFNSTLEVAKFEG 155
             IK MFNS LEVAKFEG
Sbjct:   155 IKGMFNSALEVAKFEG 170

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|F1RG23 BMS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 90/151 (59%), Positives = 113/151 (74%)

Query:     7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
             ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct:    25 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 84

Query:    65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
             +LKYTPQH+ C A FWGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKL
Sbjct:    85 LLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 144

Query:   125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
             KLTG P KI+K T+FIK MFNS LEVA+FEG
Sbjct:   145 KLTGFPYKIFKNTSFIKGMFNSALEVARFEG 175

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PKN2 BMS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 483 (175.1 bits), Expect = 9.2e-45, P = 9.2e-45
 Identities = 93/151 (61%), Positives = 113/151 (74%)

Query:     7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
             ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct:   913 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 972

Query:    65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
             +LKYTPQH+ C A FWGPIT  GTGFLAVQ V+   P FR+ ATG ILD +++ ++ KKL
Sbjct:   973 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSDIMPDFRIAATGVILDLDKSIKIVKKL 1032

Query:   125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
             KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct:  1033 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1063

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|E1BPP2 BMS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 483 (175.1 bits), Expect = 9.2e-45, P = 9.2e-45
 Identities = 92/151 (60%), Positives = 113/151 (74%)

Query:     7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
             ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct:   916 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 975

Query:    65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
             +LKYTPQH+ C A FWGPIT  GTGFLAVQ V+   P FR+ ATG +LD +++ ++ KKL
Sbjct:   976 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGSMPDFRIAATGVVLDLDKSIKIVKKL 1035

Query:   125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
             KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct:  1036 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1066

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|Q14692 BMS1 "Ribosome biogenesis protein BMS1 homolog" [Homo sapiens (taxid:9606)]

 Score = 480 (174.0 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 91/151 (60%), Positives = 113/151 (74%)

Query:     7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
             ++G  GN   N    Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y  ++ N R R
Sbjct:   908 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 967

Query:    65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
             +LKYTPQH+ C A FWGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKL
Sbjct:   968 LLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 1027

Query:   125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
             KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct:  1028 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1058

GO:0003924 "GTPase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISS;IDA

GO:0042255 "ribosome assembly" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|E9PTV4 Bms1 "Protein Bms1" [Rattus norvegicus (taxid:10116)]

 Score = 478 (173.3 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query:    20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
             Q R+KKHRWY KILKS +PVI SVGWRRFQT+P+Y  ++ N R R+LKYTPQH+ C A F
Sbjct:   925 QMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATF 984

Query:    80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
             WGPIT  GTGFLA+Q V+   P FR+ ATG +LD +++ ++ KKLKLTG P KI+K T+F
Sbjct:   985 WGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSF 1044

Query:   140 IKDMFNSTLEVAKFEG 155
             IK MFNS LEVAKFEG
Sbjct:  1045 IKGMFNSALEVAKFEG 1060

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

UNIPROTKB|F1NH69 BMS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 475 (172.3 bits), Expect = 6.8e-44, P = 6.8e-44
 Identities = 90/151 (59%), Positives = 113/151 (74%)

Query:     7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
             ++G  GN   N    Q R+KKHRWY KILK+ +P+I+S GWRRFQT+P++  ++ N R+R
Sbjct:   928 ILGGLGNSEGNVGYVQLRLKKHRWYKKILKTRDPLILSFGWRRFQTIPVFYIEDHNGRHR 987

Query:    65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
             +LKYTPQH+ C A FWGPIT  GTGFLAVQ V+   P FR+ ATG +LD +++  V KKL
Sbjct:   988 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFRIAATGVVLDLDKSITVVKKL 1047

Query:   125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
             KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct:  1048 KLTGFPFKIFKNTSFIKGMFNSQLEVAKFEG 1078

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

FB|FBgn0036686 CG7728 [Drosophila melanogaster (taxid:7227)]

 Score = 471 (170.9 bits), Expect = 1.4e-43, P = 1.4e-43
 Identities = 90/151 (59%), Positives = 113/151 (74%)

Query:    12 GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
             G +NC     +VKKHRWY KILK+G+P+I+S+GWRRFQT+ IY+K EDN R R LKYTP 
Sbjct:   805 GYVNC-----KVKKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVEDNFRQRYLKYTPN 859

Query:    72 HVACMAHFWGPITRSGTGFLAVQDVAK-----REPGFRVIATGTILDANQTAEVTKKLKL 126
             HV C   FWGPIT   TGFLA+Q V +     R  GFR+ ATG + + ++++++ KKLKL
Sbjct:   860 HVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAATGCVTEVDKSSQIMKKLKL 919

Query:   127 TGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR 157
              G P KIYKKTAF+KDMFNS+LEVAKFEG +
Sbjct:   920 VGHPFKIYKKTAFVKDMFNSSLEVAKFEGAK 950

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

WB|WBGene00022021 Y61A9LA.10 [Caenorhabditis elegans (taxid:6239)]

 Score = 464 (168.4 bits), Expect = 6.4e-43, P = 6.4e-43
 Identities = 84/144 (58%), Positives = 109/144 (75%)

Query:    12 GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
             G  N    QARVK+HRW+ + LKS +P+I+S GWRRFQT+ IYS Q+ NMR R LKYTP+
Sbjct:   689 GEQNMGVVQARVKRHRWFERTLKSRDPLIISCGWRRFQTIAIYSVQDHNMRLRFLKYTPE 748

Query:    72 HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
             H+ C A F+GP+    TG LA+Q +A + PG+R++ATG +LD +++ +V KKLKL G P 
Sbjct:   749 HMHCHASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQVVKKLKLIGHPE 808

Query:   132 KIYKKTAFIKDMFNSTLEVAKFEG 155
             KI+KKTAF+K MFNS LEVAKFEG
Sbjct:   809 KIFKKTAFVKGMFNSALEVAKFEG 832

GO:0003924 "GTPase activity" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0016246 "RNA interference" evidence=IMP

ASPGD|ASPL0000005995 AN6334 [Emericella nidulans (taxid:162425)]

 Score = 456 (165.6 bits), Expect = 5.9e-42, P = 5.9e-42
 Identities = 80/136 (58%), Positives = 103/136 (75%)

Query:    20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
             Q R+K+HRW+ KILKS +P+I S+GWRRFQTLP+YS  ++  R RMLKYTP+H+ C   F
Sbjct:   820 QVRIKRHRWHKKILKSNDPLIFSLGWRRFQTLPMYSTSDNRTRNRMLKYTPEHMHCFGTF 879

Query:    80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
             +GP+    TGF  VQ  + + PGFR+ ATG +L  ++  E+ KKLKLTGV  KI+K TAF
Sbjct:   880 YGPLVAPNTGFCCVQSFSNKNPGFRIAATGVVLSVDEHTEIVKKLKLTGVAYKIFKNTAF 939

Query:   140 IKDMFNSTLEVAKFEG 155
             IKDMFNS+LE+AKFEG
Sbjct:   940 IKDMFNSSLEIAKFEG 955

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005525 "GTP binding" evidence=IEA

GO:0003924 "GTPase activity" evidence=IEA

GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005819 "spindle" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O94653	BMS1_SCHPO	No assigned EC number	0.5539	0.8662	0.1213	yes	N/A
Q08965	BMS1_YEAST	No assigned EC number	0.5362	0.8662	0.1149	yes	N/A
Q14692	BMS1_HUMAN	No assigned EC number	0.6026	0.9490	0.1162	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	157
pfam04950	293	pfam04950, DUF663, Protein of unknown function (DU	1e-53
COG5192	1077	COG5192, BMS1, GTP-binding protein required for 40	9e-53
COG5177	769	COG5177, COG5177, Uncharacterized conserved protei	3e-13

>gnl|CDD|218343 pfam04950, DUF663, Protein of unknown function (DUF663)

 Score =  171 bits (434), Expect = 1e-53
 Identities = 62/137 (45%), Positives = 87/137 (63%)

Query: 20  QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
             ++KKHRWY K LKS  P+I+ VG+RRFQ+ PIYS+   N +++  +Y P H  C A F
Sbjct: 113 NFKIKKHRWYKKPLKSKEPLIIQVGFRRFQSQPIYSQNTSNDKHKYERYLPPHKTCNATF 172

Query: 80  WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
           +GPIT   +  LA +       GFR+ ATG IL+ +    + KKLKLTG P KI+KKTAF
Sbjct: 173 YGPITFPNSPLLAFKKSFSDTNGFRIAATGCILECDPNRIIAKKLKLTGHPYKIFKKTAF 232

Query: 140 IKDMFNSTLEVAKFEGL 156
           ++ MF +  +V  F+ +
Sbjct: 233 VRYMFFNPEDVEWFKPV 249

This family contains several uncharacterized eukaryotic proteins. Length = 293

>gnl|CDD|227519 COG5192, BMS1, GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]

 Score =  179 bits (454), Expect = 9e-53
 Identities = 75/137 (54%), Positives = 97/137 (70%), Gaps = 5/137 (3%)

Query: 20  QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
           Q R+K+HRW+ KILK+ +P+I SVGWRRFQ++P+YS ++   R RMLKYTP+H+ C   F
Sbjct: 748 QGRIKRHRWHKKILKTNDPLIFSVGWRRFQSIPVYSMKDSRTRNRMLKYTPEHMHCNVSF 807

Query: 80  WGPITRSGTGFLAVQDVAKREPG-FRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTA 138
           +GP+    TGF AVQ     E G FRV+A GTI D N  A++ KKLKL G P +I + T 
Sbjct: 808 YGPVVPPNTGFCAVQS----EKGDFRVLALGTITDVNGDAKLVKKLKLVGYPKQIVQNTV 863

Query: 139 FIKDMFNSTLEVAKFEG 155
           F++DMF S LEV KFEG
Sbjct: 864 FVRDMFTSDLEVLKFEG 880

Length = 1077

>gnl|CDD|227504 COG5177, COG5177, Uncharacterized conserved protein [Function unknown]

 Score = 65.5 bits (159), Expect = 3e-13
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 25  KHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQED--NMRYRMLKYTPQHVACMAHFWGP 82
           +H  Y   LKS   +++ +G RR    P+ SK  +  N   +  +      + +A F GP
Sbjct: 581 RHFEYEVPLKSEESMVVQLGHRRVDICPLISKGSNSPNNNQKYFRRLKPLESGVASFIGP 640

Query: 83  ITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKD 142
           I+   +  +  +  A  E    ++A+G + + +    + K+  LTG P K +K+   ++ 
Sbjct: 641 ISFGLSPVIIFKKSALDELSATLLASGGMNNFDGDRVIAKRAVLTGHPFKNHKRYVTVRY 700

Query: 143 MFNSTLEVAKFE 154
           MF S  +V  F+
Sbjct: 701 MFFSPEDVMWFK 712

Length = 769

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
PF04950	297	DUF663: Protein of unknown function (DUF663); Inte	100.0
KOG1980|consensus	754		100.0
COG5192	1077	BMS1 GTP-binding protein required for 40S ribosome	100.0
COG5177	769	Uncharacterized conserved protein [Function unknow	100.0

>PF04950 DUF663: Protein of unknown function (DUF663); InterPro: IPR007034 This domain is found at the C terminus of the ribosome biogenesis protein BMS1 and TSR1 families, which may act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus

Probab=100.00  E-value=3.5e-66  Score=439.41  Aligned_cols=153  Identities=42%  Similarity=0.753  Sum_probs=47.6

Q ss_pred             EEEee-cCCcceeEEEEEEEEeccccccccccCCeEEEEEeeeeEEeeeeeeecCCCceeEEeeccCCCceEEEEEEeec
Q psy17858          5 LRLVG-TTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPI   83 (157)
Q Consensus         5 ~~~~~-l~~E~k~sv~~~~vkr~~~~~~~lkSkd~li~~~G~RRf~~~Pifs~~~~~~r~K~~k~~~~~~~~~asfygPi   83 (157)
                      |.+.| |+||+|+||+|++|+||+||++||||||||++||||||||++||||++++|+||||+||+|+|++|+||||||+
T Consensus       101 lil~gLl~~E~k~svv~~~ikrh~~~~~~lkSkd~li~~~G~Rrf~~~Pifs~~~~~~r~k~~k~~~~~~~~~at~ygPi  180 (297)
T PF04950_consen  101 LILGGLLPHEQKMSVVNFRIKRHRWYEKPLKSKDPLIFSCGWRRFQTIPIFSQEDNNNRHKYEKYLPEGMHCVATFYGPI  180 (297)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            45566 59999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCceEEEEEeccCCCCCeEEEEEEEEecCCCCcEEEEEEEEEeeeEEEeeceEEEecCCCChhhhcccccCC
Q psy17858         84 TRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR  157 (157)
Q Consensus        84 ~~~~~~vl~f~~~~~~~~~~~l~atG~v~~~d~~riI~Kri~LtG~P~KI~K~ta~Vr~MF~n~~dV~~F~ga~  157 (157)
                      +|||+|+|+|++.+++..+++|+|||+++++|++++|+||++|+|||+|||||+||||+||||++||+||+||+
T Consensus       181 ~~~~~~vl~f~~~~~~~~~~~l~atG~v~~~d~~~~i~Kki~L~G~P~ki~k~~a~vr~MF~~~~dv~~F~~~~  254 (297)
T PF04950_consen  181 TFPPTPVLAFKESSNSGSSFRLVATGSVLNVDPDRIIVKKIKLTGYPFKIHKRTAVVRGMFFNPEDVAWFKGAE  254 (297)
T ss_dssp             ---------------TTTSS-B-EEEEEEEE--GGGS-B--EEEEEEEEEESSSCEECSSSSTCCHHHHS-S--
T ss_pred             ccccccccccccccccCCCceEEEeeeEeCCCCcchhheeeeecCchheEECceEEhhhhcCCHHHHHhhcCCE
Confidence            99999999999976566689999999999999999999999999999999999999999999999999999985

; PDB: 1WB1_D 1WB3_B 1WB2_A.

>KOG1980|consensus

Probab=100.00  E-value=2.8e-54  Score=390.72  Aligned_cols=152  Identities=27%  Similarity=0.428  Sum_probs=145.7

Q ss_pred             ceEEEee-cCCcceeEEEEEEEEeccccccccccCCeEEEEEeeeeEEeeeeeeecCCCceeEEeeccCCCceEEEEEEe
Q psy17858          3 KLLRLVG-TTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWG   81 (157)
Q Consensus         3 ~~~~~~~-l~~E~k~sv~~~~vkr~~~~~~~lkSkd~li~~~G~RRf~~~Pifs~~~~~~r~K~~k~~~~~~~~~asfyg   81 (157)
                      .+|-++| ||||+||||+||.++||+.|+.||||+++|||+||+|||.++|+||+++.|++|||+||+++.++.+|||||
T Consensus       546 ~~lvvfglL~hEhKmtV~Nfvl~r~p~~e~Plkske~livq~G~Rrf~i~PlfSs~t~ndkhK~eRfl~~~~a~vaTvia  625 (754)
T KOG1980|consen  546 LLLVVFGLLPHEHKMTVLNFVLQRHPGYEEPLKSKEELIVQCGFRRFDINPLFSSHTPNDKHKYERFLPPDEAVVATVIA  625 (754)
T ss_pred             cceeeeeccchhhhheeeEEEEecCCCCCccccccceeEEEeccceEEeccccccCCccchhhhhhhcCccceEEEEEEe
Confidence            4667788 599999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccCCceEEEEEeccCCCCCeEEEEEEEEecCCCCcEEEEEEEEEeeeEEEeeceEEEecCCCChhhhcccccC
Q psy17858         82 PITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGL  156 (157)
Q Consensus        82 Pi~~~~~~vl~f~~~~~~~~~~~l~atG~v~~~d~~riI~Kri~LtG~P~KI~K~ta~Vr~MF~n~~dV~~F~ga  156 (157)
                      ||+|+|+|||+|+.+++  ...+++|||+++++||||+|+||+||+|||||||||.|+|||||||+|||.||++-
T Consensus       626 PI~F~ps~vL~FK~s~~--~~~~LiAtG~~l~~dpdRiv~KRaVLsGhPfKi~kk~v~VRYMFFn~EDV~wFKpI  698 (754)
T KOG1980|consen  626 PITFGPSPVLIFKKSSD--GSLELIATGSLLNCDPDRIVAKRAVLSGHPFKIHKKYVVVRYMFFNREDVEWFKPI  698 (754)
T ss_pred             ccccCCcceEEEEeCCC--cccceeeeeeeeccCCcceeEeeeeecCCCceeeeeeEEEeeecCCHhHeeeecce
Confidence            99999999999999853  47899999999999999999999999999999999999999999999999999974

>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.4e-46  Score=340.27  Aligned_cols=145  Identities=50%  Similarity=0.884  Sum_probs=141.5

Q ss_pred             cCCcceeEEEEEEEEeccccccccccCCeEEEEEeeeeEEeeeeeeecCCCceeEEeeccCCCceEEEEEEeecccCCce
Q psy17858         10 TTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTG   89 (157)
Q Consensus        10 l~~E~k~sv~~~~vkr~~~~~~~lkSkd~li~~~G~RRf~~~Pifs~~~~~~r~K~~k~~~~~~~~~asfygPi~~~~~~   89 (157)
                      ||.|.++++++.+++||+||+++||++||||||+||||||+.||||..|+..|.||+||+|+||||.+|||||+++||+|
T Consensus       738 Lp~E~~~giVq~rikrhrWhKKILKTNdPlifS~GWRRFQsiPvys~~DsrTRnRMlKYTPEhmhCn~sFYGP~v~pntg  817 (1077)
T COG5192         738 LPAEKEMGIVQGRIKRHRWHKKILKTNDPLIFSVGWRRFQSIPVYSMKDSRTRNRMLKYTPEHMHCNVSFYGPVVPPNTG  817 (1077)
T ss_pred             cchhhhhhhhhhHHHHhHHHHHHhccCCCeEEEechhhhcccceeeecchhhhhhhhhcCccceeeeeeeecCccCCCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeccCCCCCeEEEEEEEEecCCCCcEEEEEEEEEeeeEEEeeceEEEecCCCChhhhcccccCC
Q psy17858         90 FLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR  157 (157)
Q Consensus        90 vl~f~~~~~~~~~~~l~atG~v~~~d~~riI~Kri~LtG~P~KI~K~ta~Vr~MF~n~~dV~~F~ga~  157 (157)
                      +.+.|+.   .++||++|+|++.++|.+..++||++|+|||++|.++|||||+||.|..||.+|+||+
T Consensus       818 Fc~Vqse---~g~frv~a~g~i~dv~~~~~lvkklklvg~p~qi~qnt~fvrdmfts~lev~kfega~  882 (1077)
T COG5192         818 FCAVQSE---KGDFRVLALGTITDVNGDAKLVKKLKLVGYPKQIVQNTVFVRDMFTSDLEVLKFEGAS  882 (1077)
T ss_pred             ceeEEec---CCceEEEEeeeeEeccccHHHHhhhhhccCcHHHhhhhHhHHHhhhhhhHHHhhcccc
Confidence            9999984   5579999999999999999999999999999999999999999999999999999996

>COG5177 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.7e-43  Score=315.80  Aligned_cols=154  Identities=23%  Similarity=0.303  Sum_probs=145.6

Q ss_pred             eEEEeec-CCcceeEEEEEEEEeccccccccccCCeEEEEEeeeeEEeeeeeeecC--CCceeEEeeccCCCceEEEEEE
Q psy17858          4 LLRLVGT-TGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE--DNMRYRMLKYTPQHVACMAHFW   80 (157)
Q Consensus         4 ~~~~~~l-~~E~k~sv~~~~vkr~~~~~~~lkSkd~li~~~G~RRf~~~Pifs~~~--~~~r~K~~k~~~~~~~~~asfy   80 (157)
                      +|-++|| .||+|.+|.||.++||..|++||+|+++|++|+|.|||.++|+||+..  +|+-|||.||+++....+|||+
T Consensus       559 llvvygll~yE~k~tV~nFs~~rh~eye~P~~s~E~~vvq~G~rr~~i~Pl~s~~s~s~Nn~qKy~r~l~p~~~~vas~I  638 (769)
T COG5177         559 LLVVYGLLEYEDKKTVHNFSLQRHFEYEVPLKSEESMVVQLGHRRVDICPLISKGSNSPNNNQKYFRRLKPLESGVASFI  638 (769)
T ss_pred             eeeeeehhhhcchhhhhhhhhhhhhcccCCCCcccceeeeeccceEEEeehhccCCCCCcchHHHHhhcCccceeeeEEE
Confidence            4557884 999999999999999999999999999999999999999999999954  3788999999999999999999


Q ss_pred             eecccCCceEEEEEeccCCCCCeEEEEEEEEecCCCCcEEEEEEEEEeeeEEEeeceEEEecCCCChhhhcccccCC
Q psy17858         81 GPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR  157 (157)
Q Consensus        81 gPi~~~~~~vl~f~~~~~~~~~~~l~atG~v~~~d~~riI~Kri~LtG~P~KI~K~ta~Vr~MF~n~~dV~~F~ga~  157 (157)
                      |||.|++.|+|+|+.+..+..+.+++|+|+.+++|.+|+|+||.+|||||||+||+.++|||||||||||.||++.|
T Consensus       639 ~Pi~Fg~spvi~fkkS~~d~~s~~l~a~g~~~n~d~~rviakrAvLtGhPFk~hK~~vtvryMFf~pEdV~wFk~Iq  715 (769)
T COG5177         639 GPISFGLSPVIIFKKSALDELSATLLASGGMNNFDGDRVIAKRAVLTGHPFKNHKRYVTVRYMFFSPEDVMWFKNIQ  715 (769)
T ss_pred             cceeccCcceEEEccCccchhhhhhhhcccccccCcchhhhhhhhhcCCCcccceeEEEEeeecCCHhHeeeecchh
Confidence            99999999999999987666788999999999999999999999999999999999999999999999999999754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
1wb1_A	482	Translation elongation factor SELB; selenocysteine	98.66

>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*

Probab=98.66  E-value=1e-08  Score=90.49  Aligned_cols=125  Identities=14%  Similarity=0.109  Sum_probs=90.5

Q ss_pred             cccccccCCeEEEEEeeeeEEeeeeeee-c--CCCceeEEeeccCCCce--EEEEEEeecccCCceEEEEEeccCCCCCe
Q psy17858         29 YGKILKSGNPVIMSVGWRRFQTLPIYSK-Q--EDNMRYRMLKYTPQHVA--CMAHFWGPITRSGTGFLAVQDVAKREPGF  103 (157)
Q Consensus        29 ~~~~lkSkd~li~~~G~RRf~~~Pifs~-~--~~~~r~K~~k~~~~~~~--~~asfygPi~~~~~~vl~f~~~~~~~~~~  103 (157)
                      ++.||++..++.+++|..+-.+....-. +  |.+..++..+++.++..  |...+-.|+...+-.-++++...+.....
T Consensus       303 ~~~~l~~g~~~~l~~~t~~~~~~v~~~~~~~~d~~~~~~~~~~l~~g~~~~v~l~~~~pv~~~~~~rfilr~~~~~~~~~  382 (482)
T 1wb1_A          303 FKYNLTPKMKVHLNVGMLIVPAVAVPFKKVTFGKTEENIILNEVISGNEXYXAFELEEKVLAEVGDRVLITRLDLPPTTL  382 (482)
T ss_dssp             CCSCCCSSCEEEEEETTEEEEEEEEEEEECCSSSCCCEEECCSSCCSSCCCEEEEEEEEECCCSSCCCBEECTTSCTTSC
T ss_pred             CCcccCCCCEEEEEEcccEEEEEEEEEeccccccccccccchhhcCCCEEEEEEEcCccEEecCCCeEEEEECCCCccCc
Confidence            4579999999999999999888765543 2  22333445567777764  44566699888765555566521112235


Q ss_pred             EEEEEEEEecCCCCcEEEEEEEEEeeeEE-----EeeceEEEecCCCChhhhcccccCC
Q psy17858        104 RVIATGTILDANQTAEVTKKLKLTGVPMK-----IYKKTAFIKDMFNSTLEVAKFEGLR  157 (157)
Q Consensus       104 ~l~atG~v~~~d~~riI~Kri~LtG~P~K-----I~K~ta~Vr~MF~n~~dV~~F~ga~  157 (157)
                      +.+|.|.++++++    +|+++|...+.|     +++++|++|+||+++.|+.||+|.+
T Consensus       383 ~tvg~G~v~~~~~----~~~l~v~k~~~k~g~v~~~~~~~i~~~lf~~~~~~~~f~g~~  437 (482)
T 1wb1_A          383 RIXGHGLIEEFKP----IKDLNIKKEVLREGKVKIDKGRTVIDGLAQSKVAAEKLIGEE  437 (482)
T ss_dssp             CCCCBCCEEECCC----GGGSCCCCCCEEEEEEECCSSCCEETTSCSSHHHHHHSCSCC
T ss_pred             eEeeEEEEEeccc----chhceeeehhhccCcEEEcCCEEEEEcCccchhhhHHhcCcE
Confidence            8999999999876    455555444444     7889999999999999999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00