Psyllid ID: psy17877

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260--
Protein Sequence
MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQPGFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCILPSTTSTTTETPTPTRIETTTLAPNTVAAVTTTTFATSKEPLKPNTEAPTTLPTIPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTIPSNPTATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISKIATEHPTTTKTIPYQETTPRPFSGAPSYTPTDSNPHVIPTEIKTIFKGGPTVSEAATTGTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDLEKSLKSVVSSVMNELNTSNILPTTTPRNSFYNVINSLDKTNDNARFDDELTSRQRDIHSKIKNIGEITFPTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLPPIITDRPLDNPHLPNILTHSTPGESPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPPIITDRPLDNPHLPNILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEYHVESKPTVTPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTNFPNIPPIQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPLPSRTPTSPPATFTLISTTQRDRQVEKSQESQRHTLTSLAVIGSLFFRFFPFFLLYP
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHccccccHHHHccccccccccccccccccccEEEEEEcccccEEEEEEcccccHHHHHccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEcccccccccccEEEcccccccEEEccccccccEEEEEEccccccccEEEEEEEEccccccccccHHHHHcccccccccEEEEEcccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccEEEccccccccccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEccccccEEcccccccccEEEEccEEEEcccccccccccccccccccccccccccccccccEEccEEcccccccccccccccccccccccccccccccccccccccEEEccccccccEEEEcccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccEEEcccccccccEEcccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcEEEccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHEEcccccHHHHHccccHEHEccccccEEccEEEEEEEcccccEEEEEEccccccHHHHccccHHHcccccccccccccccccHccccccEEEEEccccccccEEEEEcccccccccccccEEEcccccEEEEccccccccEEEEEEcccccccEEEEEEEEcccccccccEEEEEEEccccccccEEEEEcccccHHHHHHcccccccccccccccccccEcccccccccccEEcccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEEcccccEEEcccccccEcccccccHHHHccccHHccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccEEEEEccccccccEEHHHccccccccEEEEcc
Coil and Loop (DISEMBL)
MISSIALPLLCFIGVIVGlsatdewyentgynkyllesvpgevkagkyfhyslnyqgplslYLTSKNQRDSYLKQSKdlwdhkkgseqpnpnqpgfpkekhrssswltvvrdrpsdadfyvstsvekptyepdtydvqsascgidvvhipesfkrpvhisvyghpaaeTSVYILDVvhreepfdseiNLEYYLsekknssqsiycslvsphsmqllaacpvgrwganctskcdcgeingnkchhltgtcilpsttstttetptptrietttlapntvAAVTTttfatskeplkpnteapttlptipsvlTKLEDtldvfnpiqnfdemspiipvrgvstytislptipsnptateewpytlpklttarpvfnevgikkdvpppgldwpytlpelttprpvlngeivnkvlpqvevdvpnsfttrkspvddliireiapivdaipskipkfemgitsrthspifntdiidknlspiVDSISKIatehptttktipyqettprpfsgapsytptdsnphvipteiktifkggptvseaattgtsilngDSIAKSISNNLnafaksdsvtvqatlptltmptlgvsfnfpvisstpgtktkviDKLNIMTSDLEKSLKSVVSSVMNElntsnilptttprnsfYNVINSLdktndnarfddelTSRQRDIHSKIKnigeitfptlpevrtneflnpaalttssvppsrdkptslppiitdrpldnphlpnilthstpgespepylptstlsslgniardstpnviakefssrdkptslppiitdrpldnphlpniltystpgespephlptstlsslgniardltpNVIAKEFNtiassglpeyhveskptvtpidliitqstspterqtsshitsttltkvseysstnfpnippiqnfpklskdlsfdfnptlpplqninlppsfnpsfppmsnfyptlppmpsfnltlppvpsfnpsfptmsnfnptlppmsnfnptippkenfnptlppvqninptfppvqnfnhtlppmsnfnptippvqnfnstlppvqnfnptlppvenfnptlppmsnfnptippkenfnptlppvqninptfppvqnfnhtlppmsnfnptlppvqnfnptfppvkninptfppvqnfnptfppiqnfnptlppvpnfnptlppihinptfppkknfnvissqqnfdlsvssafpsnsnwlnnmtptlpslslttptvfplpsrtptsppatftliSTTQRDRQVEKSQESQRHTLTSLAVIGSlffrffpffllyp
Flexible Loop (DISEMBL)
MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGseqpnpnqpgfpkekhrsssWLTVVRDRPSDADFYvstsvekptyepdtydVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGtcilpsttstttetptptrietttlapntvAAVTTttfatskeplkpnteapttlptiPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLptipsnptateewpytLPKLTTARPVFNEvgikkdvpppgldwpyTLPELTTPRPVLNGEIVNKVLpqvevdvpnsfttrkspvddlIIREIapivdaipskiPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISkiatehptttktipyqettprpFSGAPSYTPTDSNPHVIPTEIKTIFKGGPTVSEAATTGTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLtmptlgvsfnfpvisstpgtktkviDKLNIMTSDLEKSLKSVVSSVMNELNtsnilptttprnsFYNVINSLDKTNDNARFDDELTsrqrdihskiknigeitfptlpevrtNEFLNPaalttssvppsrdkPTSLPPIITDRPLDNPHLPNILTHSTPGESPEPYLPTSTLSSLGNIARDSTPNVIAkefssrdkptslppiitdrpldnphLPNILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTiassglpeyhveskPTVTPIDLIITqstspterqtsshitsttlTKVSEYSSTNFPNIPPIQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPlpsrtptsppatFTLISTTQRDRQVEksqesqrhtltsLAVIGSLFFRFFPFFLLYP
Low Complexity Region (SEG)
MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQPGFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLtgtcilpsttstttetptptrietttlapntvaavttttfatSKEPLKPNTEAPTTLPTIPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTIPSNPTATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISKIATEHPTTTKTIPYQETTPRPFSGAPSYTPTDSNPHVIPTEIKTIFKGGPTVSEAATTGTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDLEKSLKsvvssvMNELNTSNILPTTTPRNSFYNVINSLDKTNDNARFDDELTSRQRDIHSKIKNIGEITFPTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLPPIITDRPLDNPHLPNILTHSTPGESPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPPIITDRPLDNPHLPNILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEYHVESKPTVTPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTnfpnippiqnfpKLSKDLSFDFNPTLPPLQNInlppsfnpsfppmsnfypTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQnfnptlppvpnfnptlppIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMtptlpslslttptvfplpsRTPTSPPATFTLISTTQRDRQVEKSQESQRHTLTSLAVIGSlffrffpffllYP
Disordered region (IsUnstruct)
****IALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLT******************************************LTVV*******DFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYY**********IYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCIL**************************AAVT**********************TIPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTIPSNPTATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISKI************************************IPTEIKTIFKGGPT*******GTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDL******VV**V***L**SNILPTTTPRNSFYNVINSL**********************KIKNIGEITFPTLPEVRTNEF******************************************************************************************************************************IARDLTPNVIAKEFNTIASSGLPEYHVESKPTVTPIDLII***********************************************************************************************************************************************************************************************************************************************************************V*NFNPTFPPIQNF*************LPPIHIN**********V****************************************************************************LTSLAVIGSLFFRFFPFFLLY*
Disordered Region (DISOPRED)
**SSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKG************KEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCIL**************RIETTTLAPNTVAAV*********************LPTIPSVLTKLEDTLDVFNPIQNFD***************************TEEWPYTLPKLTTARPV**************LDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPN***********LIIREIAPIVDAIPSKI************SPIFNTDIIDKNLSPIVDSISKIA****************************************************************************************L****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SLFFRFFPFFLLYP
Disordered Region (DISEMBL)
MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWD************************WLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCILPST*********PTRIETTTLAPNTVAAVTTTTFATSKEPLKPNTEAPTTLPTIPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTIPSNPTATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISKIATEHPTTTKTIPYQETTPRPFSGAPSYTPTDSNPHVIPTEIKTIFKGGPTVSEAATTGTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDLEKSLKSVVSSVMNELNTSNILPTTTPRNSFYNVINSLDKTNDNARFDDELTSRQRDIHSKIKNIGEITFPTLPEVRTNEFLNPAAL************TSLPPIITDRPLDNPHLPNILTHSTPGESPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPPIITDRPLDNPHLPNILTYST***********STLSSLGNIARDLTPNVIAKEFNTIASSGLPEYHVESKPTVTPIDLIITQ***************TTLTKVSEYSSTNFPNIPPIQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPLPSRTPTSPPATFTLIST***************HTLTSLAVIGSLFFRFFPFFLLYP
Disordered Region (DISPRO)
*ISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRD*YLKQSKDLWDHKKGSEQP**NQPGFP******SSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCILPS***************TTTLAPNTVAAVTT******************T***IPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTI******TEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFT*RKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNL************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************TFTLISTTQRDRQVEKSQESQRHTLTSLAVIGSLFFRFFPFFLLYP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQPGFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVHREEPFDSEINLEYYLSEKKNSSQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGEINGNKCHHLTGTCILPSTTSTTTETPTPTRIETTTLAPNTVAAVTTTTFATSKEPLKPNTEAPTTLPTIPSVLTKLEDTLDVFNPIQNFDEMSPIIPVRGVSTYTISLPTIPSNPTATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLPQVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKNLSPIVDSISKIATEHPTTTKTIPYQETTPRPFSGAPSYTPTDSNPHVIPTEIKTIFKGGPTVSEAATTGTSILNGDSIAKSISNNLNAFAKSDSVTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDLEKSLKSVVSSVMNELNTSNILPTTTPRNSFYNVINSLDKTNDNARFDDELTSRQRDIHSKIKNIGEITFPTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLPPIITDRPLDNPHLPNILTHSTPGESPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPPIITDRPLDNPHLPNILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEYHVESKPTVTPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTNFPNIPPIQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPLPSRTPTSPPATFTLISTTQRDRQVEKSQESQRHTLTSLAVIGSLFFRFFPFFLLYP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1262	2.2.26 [Sep-21-2011]
Q27409	751	Adhesive plaque matrix pr	N/A	N/A	0.185	0.311	0.272	1e-15
Q25460	875	Adhesive plaque matrix pr	N/A	N/A	0.206	0.298	0.263	7e-12
Q5ZLK8	185	UPF0669 protein C6orf120	yes	N/A	0.095	0.654	0.269	2e-11
A7SAZ1	165	UPF0669 protein v1g209471	N/A	N/A	0.074	0.569	0.314	4e-11
Q6AY64	185	UPF0669 protein C6orf120	yes	N/A	0.066	0.454	0.383	2e-09
Q9DAY5	185	UPF0669 protein C6orf120	yes	N/A	0.066	0.454	0.383	4e-09
Q7Z4R8	191	UPF0669 protein C6orf120	yes	N/A	0.057	0.376	0.435	6e-09
Q9BGQ6	191	UPF0669 protein C6orf120	N/A	N/A	0.057	0.376	0.435	9e-09
A2VDZ5	184	UPF0669 protein C6orf120	yes	N/A	0.056	0.385	0.455	9e-09
Q6NZZ3	186	UPF0669 protein C6orf120	no	N/A	0.083	0.569	0.294	1e-08

>sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein OS=Mytilus galloprovincialis GN=FP1 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 1/235 (0%)

Query: 924  NPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENF 983
             PS+PP     P+ PP     L+ PP     PS+P      P+ PP     P+ PP    
Sbjct: 422  KPSYPPTYKAKPSYPPTYKAKLSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKT 481

Query: 984  NPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENF 1043
             P+ P      P++        + PP     P+ PP      + PP     P+ PP    
Sbjct: 482  KPSYPRTYKAKPSYSSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKA 541

Query: 1044 NPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNF 1103
             P+ PP     P+ P       + PP     P++PP      + PP     P+ PP    
Sbjct: 542  KPSYPPTYKAKPSYPQTYKAKSSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKA 601

Query: 1104 NPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIH-INPTFP 1157
             P++PP     P++PP     P++PP     P+ PP     P+ PP +   P++P
Sbjct: 602  KPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYP 656

Provides adhesiveness to the mussel's foot. Mussels produce one of the strongest water insoluble glues. The mussel's adhesive is a bundle of threads, called a byssus, formed by a fibrous collagenous core coated with adhesive proteins.
Mytilus galloprovincialis (taxid: 29158)

>sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Fragment) OS=Mytilus edulis GN=FP1 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 119/315 (37%), Gaps = 54/315 (17%)

Query: 889  NIPPIQNFPKLSKDLSFDFNPTLPPLQN--------INLPPSFN--PSFP---------- 928
            N PP+   PK++   ++   P+ PP           I  PP++   PS+P          
Sbjct: 70   NYPPVYK-PKMTYPPTYKPKPSYPPTYKSKPTYKPKITYPPTYKAKPSYPSSYKPKKTYP 128

Query: 929  ----PMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNF------NPTLPPMSNFNPTIP 978
                P   + PT  P PS+  T  P PS+ PS+ T   +       P+ PP     P+ P
Sbjct: 129  PTYKPKLTYPPTYKPKPSYPPTYKPKPSYPPSYKTKKTYPSSYKAKPSYPPTYKAKPSYP 188

Query: 979  PKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNST------LPPVQN 1032
            P     P+ PP     PT+        T P      P+ PP      T       PP   
Sbjct: 189  PTYKAKPSYPPTYKAKPTY----KAKPTYPSTYKAKPSYPPTYKAKPTYKAKPSYPPTYK 244

Query: 1033 FNPTLPPVENFNPTLPPMSNFNPTIPPKENF--------NPTLPPVQNINPTFPPVQNFN 1084
              P+ PP     P+ PP     PT   K  +         P+ PP     P++PP     
Sbjct: 245  AKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYKAKPTYKAKPSYPPTYKAKPSYPPTYKAK 304

Query: 1085 HTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFN 1144
             + PP     P+ PP     P++PP     P++PP     PT+       PT P      
Sbjct: 305  PSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTY----KAKPTYPSTYKAK 360

Query: 1145 PTLPPIH-INPTFPP 1158
            P+ PP +   P++PP
Sbjct: 361  PSYPPTYKAKPSYPP 375

Provides adhesiveness to the mussel's foot. Mussels produce one of the strongest water insoluble glues. The mussel's adhesive is a bundle of threads, called a byssus, formed by a fibrous collagenous core coated with adhesive proteins.

Mytilus edulis (taxid: 6550)

>sp|Q5ZLK8|CF120_CHICK UPF0669 protein C6orf120 homolog OS=Gallus gallus GN=RCJMB04_5l6 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 57/178 (32%)

Query: 1   MISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLS 60
           +I  +A  +LC +         +EW         LL  V G++ AG Y +  LN++G + 
Sbjct: 9   LIVFVAAQVLCLVNTFEEEDVPEEWI--------LLHVVQGQIGAGNYSYLRLNHEGKIV 60

Query: 61  LYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQPGFPKEKHRSSSWLTVVRDRPSDADFY 120
           L + S       LK                                         DAD Y
Sbjct: 61  LQMQS-------LK----------------------------------------GDADLY 73

Query: 121 VSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDVVH 178
           VS     P++  D Y++QS +CG D+VH+P  F+RPV I +YGHP+ + S + + V +
Sbjct: 74  VSDMTLHPSF--DEYELQSVTCGQDIVHVPAHFRRPVGIGIYGHPSHQESEFEMKVYY 129

Gallus gallus (taxid: 9031)

>sp|A7SAZ1|U669_NEMVE UPF0669 protein v1g209471 OS=Nematostella vectensis GN=v1g209471 PE=3 SV=1

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 49/143 (34%)

Query: 35  LLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQP 94
           +L++  GE+ AG Y +++LN +G ++L L S                             
Sbjct: 26  VLQTFTGEIGAGNYTYFTLNREGEITLILESTE--------------------------- 58

Query: 95  GFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFK 154
                                DAD Y+S +V KP YE   YD+QS++CG DVV IP  FK
Sbjct: 59  --------------------GDADLYISQNVAKPDYE--NYDLQSSTCGQDVVTIPVEFK 96

Query: 155 RPVHISVYGHPAAETSVYILDVV 177
           RP+ I V GH  +  S Y + VV
Sbjct: 97  RPIGIGVLGHANSPLSKYTMTVV 119

Nematostella vectensis (taxid: 45351)

>sp|Q6AY64|CF120_RAT UPF0669 protein C6orf120 homolog OS=Rattus norvegicus PE=2 SV=1

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 116 DADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILD 175
           DAD YVS S   P++  D Y++QS +CG DVV IP  F+RPV I +YGHP+   S + + 
Sbjct: 69  DADLYVSDSTPHPSF--DEYELQSVTCGQDVVSIPAHFQRPVGIGIYGHPSHHESDFEMR 126

Query: 176 VVHREEPFDSEINLEYYLSEKKNSSQ 201
           V +             Y +++  +SQ
Sbjct: 127 VYYDRTVDQYPFGEAAYAADQTGTSQ 152

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Rattus norvegicus (taxid: 10116)

>sp|Q9DAY5|CF120_MOUSE UPF0669 protein C6orf120 homolog OS=Mus musculus PE=2 SV=1

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 116 DADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILD 175
           DAD YVS S   P++  D Y++QS +CG DVV IP  F+RPV I +YGHP+   S + + 
Sbjct: 69  DADLYVSDSTPHPSF--DDYELQSVTCGQDVVSIPAHFQRPVGIGIYGHPSHHESDFEMR 126

Query: 176 VVHREEPFDSEINLEYYLSEKKNSSQ 201
           V +             Y ++   +SQ
Sbjct: 127 VYYDRTVDQYPFGEAAYFTDPTGASQ 152

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Mus musculus (taxid: 10090)

>sp|Q7Z4R8|CF120_HUMAN UPF0669 protein C6orf120 OS=Homo sapiens GN=C6orf120 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 6/78 (7%)

Query: 110 VRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAET 169
           +R    DAD YVS S   P++  D Y++QSA+CG D V IP  F+RPV I VYGHP+   
Sbjct: 69  MRSLKGDADLYVSASSLHPSF--DDYELQSATCGPDAVSIPAHFRRPVGIGVYGHPSHLE 126

Query: 170 SVYILDVVH----REEPF 183
           S + + V +     + PF
Sbjct: 127 SEFEMKVYYDGTVEQHPF 144

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Homo sapiens (taxid: 9606)

>sp|Q9BGQ6|CF120_MACFA UPF0669 protein C6orf120 homolog OS=Macaca fascicularis GN=QflA-14362 PE=2 SV=2

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 6/78 (7%)

Query: 110 VRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAET 169
           +R    DAD YVS S   P++  D Y++QSA+CG D V IP  F+RPV I VYGHP+   
Sbjct: 69  MRSLKGDADLYVSASSLHPSF--DDYELQSATCGPDAVSIPAHFRRPVGIGVYGHPSHLE 126

Query: 170 SVYILDVVH----REEPF 183
           S + + V +     + PF
Sbjct: 127 SEFEMKVYYDGTVEQHPF 144

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Macaca fascicularis (taxid: 9541)

>sp|A2VDZ5|CF120_BOVIN UPF0669 protein C6orf120 homolog OS=Bos taurus PE=2 SV=1

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 110 VRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGH----- 164
           +R    DAD YVS S   P++  D Y++QSA+CG D V IP  F+RPV I VYGH     
Sbjct: 63  MRSLRGDADLYVSDSTLHPSF--DEYELQSATCGADAVSIPAHFRRPVGIGVYGHRSHLE 120

Query: 165 PAAETSVYILDVVHREEPF 183
            A E  VY  D      PF
Sbjct: 121 SAFEMKVY-YDATLEPHPF 138

May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.

Bos taurus (taxid: 9913)

>sp|Q6NZZ3|CF120_DANRE UPF0669 protein C6orf120 homolog OS=Danio rerio GN=zgc:77929 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 50/156 (32%)

Query: 35  LLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQP 94
           LL  V G + AG Y +  LN++G + L++ S       LK                    
Sbjct: 35  LLHVVQGHIGAGNYSYLRLNHEGRIILHMQS-------LK-------------------- 67

Query: 95  GFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFK 154
                                DAD YVS    +P +  DTY +QS +CG DVV +P  F 
Sbjct: 68  --------------------GDADLYVSDKTLRPNF--DTYKLQSTTCGPDVVVVPGDFL 105

Query: 155 RPVHISVYGHPAAETSVYILDVVHREEPFDSEINLE 190
           RPV I +YGHP+   S + + V + ++   +EI +E
Sbjct: 106 RPVGIGIYGHPSYMESEFEMKVFYDQKAL-AEIEIE 140

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1262
301620513	846	PREDICTED: acyl-CoA synthetase family me	0.164	0.244	0.394	1e-26
156359590	213	predicted protein [Nematostella vectensi	0.158	0.938	0.393	3e-26
432849958	4445	PREDICTED: protein unc-80 homolog [Oryzi	0.198	0.056	0.285	2e-17
345489848	1022	PREDICTED: DNA repair endonuclease XPF-l	0.090	0.111	0.348	7e-15
326677470	1409	PREDICTED: adhesive plaque matrix protei	0.175	0.157	0.390	1e-14
119483353	708	hypothetical protein L8106_04851 [Lyngby	0.152	0.271	0.328	3e-14
6647432	751	RecName: Full=Adhesive plaque matrix pro	0.185	0.311	0.272	1e-13
380020346	977	PREDICTED: LOW QUALITY PROTEIN: DNA repa	0.071	0.092	0.354	1e-13
71421353	1148	hypothetical protein [Trypanosoma cruzi	0.186	0.204	0.165	7e-13
340715131	157	PREDICTED: UPF0669 protein C6orf120 homo	0.088	0.713	0.325	8e-13

>gi|301620513|ref|XP_002939621.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like [Xenopus (Silurana) tropicalis]

 Score =  129 bits (324), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 941  PSFNLTLPPVPSFNPSFPTMSN------FNPTLPPMSNFNPTIPPKENFNPTLPPVQNIN 994
            P+  + L   P+F     T++        N TL P+   N T+ P E  N TL PV+  N
Sbjct: 342  PTMYIDLLSQPNFAAHISTLTTGIFIVYANSTLGPVEYANSTLGPVEYANSTLGPVEYAN 401

Query: 995  PTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFN 1054
             T  PV+  N TL P+   N T+ PV+  NSTL PV+  N TL PVE  N TL P+   N
Sbjct: 402  STLGPVEYANSTLGPVEYANSTLGPVEYANSTLGPVEYANSTLGPVEYANSTLGPVEYAN 461

Query: 1055 PTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNIN 1114
             T+ P E  N TL PV+  N T  PV+  N TL  +   N TL PV+  N T  PV+  N
Sbjct: 462  STLGPVEYANSTLGPVEYANSTLGPVEYANSTLGLVDYANSTLGPVEYANSTLGPVEYAN 521

Query: 1115 PTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTL 1147
             T  PV   N T   ++  N TL  V   N TL
Sbjct: 522  STLGPVDYANSTLGLVEYANSTLGLVEYANSTL 554

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156359590|ref|XP_001624850.1| predicted protein [Nematostella vectensis] gi|156211653|gb|EDO32750.1| predicted protein [Nematostella vectensis]

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 113/206 (54%)

Query: 943  FNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQN 1002
             N +LP   + NPS P     NP+LP     NP++P ++  NP+LP  Q +NP+ P  Q 
Sbjct: 1    MNPSLPSRQAMNPSLPLRQAMNPSLPLRQPMNPSLPSRQEMNPSLPSRQAMNPSLPSRQA 60

Query: 1003 FNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKEN 1062
             N +LP     NP++P  Q  N +LP  Q  NP LP  +  NP+LP     NP++P ++ 
Sbjct: 61   INPSLPSRQAMNPSLPSRQAMNPSLPSRQEMNPFLPSRQAMNPSLPSRQAMNPSLPSRQA 120

Query: 1063 FNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQN 1122
             NP+LP  Q +NP+ P  Q  N +LP     NP+LP  Q  NP+ P  + +NP+ P  Q 
Sbjct: 121  MNPSLPSRQAMNPSLPSRQEMNPSLPSRQGMNPSLPSRQAMNPSLPSRQAMNPSLPLRQA 180

Query: 1123 FNPTFPPIQNFNPTLPPVPNFNPTLP 1148
             NP+ P  Q  NP+LP     NP+LP
Sbjct: 181  MNPSLPLRQAMNPSLPLRQAMNPSLP 206

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|432849958|ref|XP_004066697.1| PREDICTED: protein unc-80 homolog [Oryzias latipes]

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 2/252 (0%)

Query: 901  KDLSFDFNPTLPPLQNINLP-PSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPT 959
            K L F   P+L  LQ +  P  +   + PP+     T  P+ +   T PP+ +     P+
Sbjct: 2650 KALKF-MGPSLRALQFMGPPLKALKFTGPPLRALQFTGSPLRALQFTGPPLKALKFMGPS 2708

Query: 960  MSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPP 1019
            +     T PP+     T PP      T PP++ +  T PP++      PP+     T PP
Sbjct: 2709 LRALQFTGPPLKALKFTGPPLRALQFTGPPLRALQFTGPPLKALKFMGPPLRALQFTGPP 2768

Query: 1020 VQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPP 1079
            ++  NS +P +     T PP+     T PP+     T PP      T PP+  +  T PP
Sbjct: 2769 LKALNSRVPHLMALQFTGPPLRALQFTGPPLRALQFTGPPLRALQFTGPPLMALQFTGPP 2828

Query: 1080 VQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPP 1139
            ++    T PP+     T PP++    T PP++ +  T PP++    T PP++    T PP
Sbjct: 2829 LRALQFTGPPLRALQFTGPPLKALQFTGPPLRALQFTDPPLRALQFTGPPLKALQFTGPP 2888

Query: 1140 VPNFNPTLPPIH 1151
            +     T PP+ 
Sbjct: 2889 LKALQFTGPPLR 2900

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345489848|ref|XP_001600324.2| PREDICTED: DNA repair endonuclease XPF-like [Nasonia vitripennis]

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 80/175 (45%), Gaps = 61/175 (34%)

Query: 2   ISSIALPLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKAGKYFHYSLNYQGPLSL 61
           +S IAL + C + V        +  EN      LL  V  +V AG Y +YSL Y G + +
Sbjct: 4   LSIIALVITCIVSV--------QGLEN------LLHYVIDDVPAGSYKYYSLMYDGLIKI 49

Query: 62  YLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQPGFPKEKHRSSSWLTVVRDRPSDADFYV 121
            L++                           Q G                    DAD YV
Sbjct: 50  RLST---------------------------QSG--------------------DADIYV 62

Query: 122 STSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILDV 176
           S +  KPTYEPD Y +QS +CG D+++IP+SFKRPV I VYGHP+ E+S Y L V
Sbjct: 63  SQTTTKPTYEPDRYCLQSTTCGEDIIYIPQSFKRPVSIGVYGHPSHESSRYTLLV 117

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326677470|ref|XP_003200844.1| PREDICTED: adhesive plaque matrix protein-like, partial [Danio rerio]

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 97/223 (43%), Gaps = 1/223 (0%)

Query: 936  TLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINP 995
            TLP     N TLPP    + + P     N TLP     + T+PP    N TLPP    + 
Sbjct: 207  TLPLTHLTNTTLPPTHLTSATLPLTHLTNTTLPLTHLTSATLPPPHLTNTTLPPTHLTSA 266

Query: 996  TFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNP 1055
            T P     N TLPP    N T+P     N+TLPP    N TLPP    N TLP     N 
Sbjct: 267  TLPLTHLTNTTLPPTHLTNTTLPLTHLTNTTLPPTHLTNTTLPPTHLTNTTLPLTHLTNT 326

Query: 1056 TIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINP 1115
            T+PP    N TLP     N T PP    N TLP     N TLP     N T P     + 
Sbjct: 327  TLPPTHLTNTTLPLTHLTNTTLPPTHLTNTTLPLTHLTNTTLPLTHLTNTTLPLTHLTSA 386

Query: 1116 TFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHI-NPTFP 1157
            T PP    N T P     N TLP     N TLPP H+ N T P
Sbjct: 387  TLPPTHLTNTTLPLTHLTNTTLPLTHLTNTTLPPTHLTNTTLP 429

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|119483353|ref|ZP_01618767.1| hypothetical protein L8106_04851 [Lyngbya sp. PCC 8106] gi|119458120|gb|EAW39242.1| hypothetical protein L8106_04851 [Lyngbya sp. PCC 8106]

 Score = 88.2 bits (217), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 82/192 (42%)

Query: 946  TLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNH 1005
            T+ P     P+        PT+ P     PT+ P     PT+ P + I PT  P      
Sbjct: 308  TVIPGGQIGPTVIPGGQIGPTVIPGGQIGPTVIPGGQTGPTVIPGRQIGPTVIPGGQTGP 367

Query: 1006 TLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNP 1065
            T+ P     PTI P Q    T+ P +   PT+ P +   PT+ P     PTI P +   P
Sbjct: 368  TVIPGRQIGPTIIPGQQTGPTVIPGRQIGPTIIPGQQTGPTVIPGRQIGPTIIPGQQTGP 427

Query: 1066 TLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNP 1125
            T+ P + I PT  P Q    T+ P     PT+ P Q   PT  P + I PT  P Q   P
Sbjct: 428  TVIPGRQIGPTIIPGQQTGPTVIPGRQIGPTIIPGQQTGPTVIPGRQIGPTIIPGQQTGP 487

Query: 1126 TFPPIQNFNPTL 1137
            T  P Q   PT+
Sbjct: 488  TVIPGQQTGPTV 499

Source: Lyngbya sp. PCC 8106

Species: Lyngbya sp. PCC 8106

Genus: Lyngbya

Order: Oscillatoriales

Phylum: Cyanobacteria

Superkingdom: Bacteria

>gi|6647432|sp|Q27409.1|FP1_MYTGA RecName: Full=Adhesive plaque matrix protein; AltName: Full=Foot protein 1; AltName: Full=MGFP-1; Short=MGFP1; Flags: Precursor gi|961464|dbj|BAA09851.1| adhesive plaque protein [Mytilus galloprovincialis]

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 95/235 (40%), Gaps = 1/235 (0%)

Query: 924  NPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENF 983
             PS+PP     P+ PP     L+ PP     PS+P      P+ PP     P+ PP    
Sbjct: 422  KPSYPPTYKAKPSYPPTYKAKLSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKT 481

Query: 984  NPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENF 1043
             P+ P      P++        + PP     P+ PP      + PP     P+ PP    
Sbjct: 482  KPSYPRTYKAKPSYSSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKA 541

Query: 1044 NPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNF 1103
             P+ PP     P+ P       + PP     P++PP      + PP     P+ PP    
Sbjct: 542  KPSYPPTYKAKPSYPQTYKAKSSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKA 601

Query: 1104 NPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIH-INPTFP 1157
             P++PP     P++PP     P++PP     P+ PP     P+ PP +   P++P
Sbjct: 602  KPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYP 656

Source: Mytilus galloprovincialis

Species: Mytilus galloprovincialis

Genus: Mytilus

Family: Mytilidae

Order: Mytiloida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|380020346|ref|XP_003694048.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair endonuclease XPF-like [Apis florea]

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 64/141 (45%), Gaps = 51/141 (36%)

Query: 34  YLLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQ 93
           Y+++ VPG    G Y +YSL Y+G + + L S                            
Sbjct: 69  YIIDEVPG----GSYKYYSLAYEGFIKIILKSD--------------------------- 97

Query: 94  PGFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESF 153
                                 DAD Y S +  KPTYEPD Y +QSA+CG D + IP+SF
Sbjct: 98  --------------------TGDADLYASQTTTKPTYEPDQYCLQSATCGEDTILIPDSF 137

Query: 154 KRPVHISVYGHPAAETSVYIL 174
           KRPV I +YGHP+ E S YIL
Sbjct: 138 KRPVSIGIYGHPSHENSKYIL 158

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|71421353|ref|XP_811780.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876484|gb|EAN89929.1| hypothetical protein, conserved [Trypanosoma cruzi]

 Score = 83.6 bits (205), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 1/236 (0%)

Query: 929  PMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLP 988
            P  N    + P       + P  +         N    + P  +    + P EN    + 
Sbjct: 369  PAENVQELVTPAEDVQELVTPAENVQELVAPAENVQELVAPAEDVQELVTPAENVQELVA 428

Query: 989  PVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLP 1048
            P ++I     P ++    + P  +    + P +N    + P +N    + P E+    + 
Sbjct: 429  PAEDIQELVAPAEDIQELVTPAEDIQELVTPAENVQELVTPAENVQELVTPAEDIQELVT 488

Query: 1049 PMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFP 1108
            P  N    + P E+    + P ++I     P ++    + P  +    + P +N      
Sbjct: 489  PAENVQELVAPAEDIRKLVAPAEDIRKLVAPAEDIQELVTPAEDIQELVTPAENVQELVA 548

Query: 1109 PVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIH-INPTFPPKKNFN 1163
            P ++I     P ++      P +N    + P  +    + P   I     P +N  
Sbjct: 549  PAEDIRKLVAPAEDIQELVAPAENVQELVAPAEDIRKLVTPAEDIQELVTPAENVQ 604

Source: Trypanosoma cruzi strain CL Brener

Species: Trypanosoma cruzi

Genus: Trypanosoma

Family: Trypanosomatidae

Order: Kinetoplastida

Superkingdom: Eukaryota

>gi|340715131|ref|XP_003396073.1| PREDICTED: UPF0669 protein C6orf120 homolog [Bombus terrestris]

 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 75/175 (42%), Gaps = 63/175 (36%)

Query: 35  LLESVPGEVKAGKYFHYSLNYQGPLSLYLTSKNQRDSYLKQSKDLWDHKKGSEQPNPNQP 94
           LL  V  EV  G Y +Y+L Y G + + L S+                            
Sbjct: 21  LLHYVTDEVAGGSYKYYNLAYDGFVRIVLISE---------------------------- 52

Query: 95  GFPKEKHRSSSWLTVVRDRPSDADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFK 154
                                D D Y S  + KPTYEPD Y +QSA+CG DV+ IP+SFK
Sbjct: 53  -------------------VGDTDLYASQIITKPTYEPDQYCLQSATCGDDVIVIPDSFK 93

Query: 155 RPVHISVYGHPAAETSVYILDV----------------VHREEPFDSEINLEYYL 193
           RPV I +YGHP+ E+S YIL V                +H EE   S +++ +YL
Sbjct: 94  RPVSIGIYGHPSHESSKYILLVYETTDTENISFKRNLDIHHEEQKPSILSITWYL 148

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1262
UNIPROTKB|Q25460	875	FP1 "Adhesive plaque matrix pr	0.342	0.493	0.230	3.5e-26
GENEDB_PFALCIPARUM|PF14_0194	484	PF14_0194 "spliceosome-associa	0.103	0.270	0.509	2.8e-25
UNIPROTKB|Q8ILQ0	484	PF14_0194 "Spliceosome-associa	0.103	0.270	0.509	2.8e-25
TAIR|locus:4010713901	656	AT4G22485 "AT4G22485" [Arabido	0.125	0.242	0.397	9.6e-21
TAIR|locus:4010713767	1480	AT3G22142 "AT3G22142" [Arabido	0.341	0.291	0.225	1.6e-06
TAIR|locus:2038658	761	EPR1 "AT2G27380" [Arabidopsis	0.152	0.252	0.300	4.5e-17
TAIR|locus:2124142	857	AT4G18670 "AT4G18670" [Arabido	0.145	0.214	0.304	6.1e-16
TAIR|locus:2147810	275	GASA14 "AT5G14920" [Arabidopsi	0.132	0.607	0.372	2.8e-15
UNIPROTKB|Q5ZLK8	185	RCJMB04_5l6 "UPF0669 protein C	0.048	0.329	0.444	2.9e-15
TAIR|locus:2028911	720	PERK12 "proline-rich extensin-	0.138	0.243	0.359	6.7e-15

UNIPROTKB|Q25460 FP1 "Adhesive plaque matrix protein" [Mytilus edulis (taxid:6550)]

 Score = 279 (103.3 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
 Identities = 109/472 (23%), Positives = 153/472 (32%)

Query:   678 TFPTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLPPIITDRPLDNPHLPNILTHSTPGES 737
             T+   P  +      P      S PP+     S PP    +P   P          P   
Sbjct:   274 TYKAKPTYKAKPSYPPTYKAKPSYPPTYKAKPSYPPTYKAKP-SYPPTYKAKPSYPPTYK 332

Query:   738 PEPYLPTSTLSSLGNIARDSTPNVI-AKEF---SSRDKPTSLPPIITDRPL--DNPHLPN 791
              +P  P +  +     A+ + P+   AK     + + KP S PP    +P     P  P 
Sbjct:   333 AKPSYPPTYKAKPTYKAKPTYPSTYKAKPSYPPTYKAKP-SYPPTYKAKPTYKAKPSYPP 391

Query:   792 ILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEY--HVESKPTV 849
               TY      P    PT              P   AK          P Y    ++KP+ 
Sbjct:   392 --TYKAKPSYP----PTYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPSYPPSYKAKPSY 445

Query:   850 TPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTXXXXXXXXXXXXKLSKDLSFD--- 906
              P     T    PT +   ++  ST   K S  +S             K S   S+    
Sbjct:   446 PP-----TYKAKPTYKAKPTY-PSTYKAKPSYPASYKAKPSYPPTYKSKSSYPSSYKPKK 499

Query:   907 -FNPTLPPLQNIXXXXXXXXXXXXXXXXXXTLPPMPSFNLTLPPVPSFNPSFPTMSNFNP 965
              + PT  P                      T PP     ++ PP     PS+P      P
Sbjct:   500 TYPPTYKPKLTYKPTYKPKPSYPPSYKPKTTYPPTYKPKISYPPTYKAKPSYPATYKAKP 559

Query:   966 TLPPMSNFNPTIPPKENFNPTLPPVQNINP------TFPPVQNFNHTLPPMSNFNPTIPP 1019
             + PP     P+ PP     P+ PP     P      T+P       + PP     P+ PP
Sbjct:   560 SYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYKAKPTYPSTYKAKPSYPPTYKAKPSYPP 619

Query:  1020 VQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTI--PPKENFNPTLPPVQNINPTF 1077
                   + PP     PT P      P+ PP   + P I  PP     P+ PP     P++
Sbjct:   620 TYKAKPSYPPTYKAKPTYPSTYKAKPSYPP--TYKPKISYPPTYKAKPSYPPTYKAKPSY 677

Query:  1078 PPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPP 1129
             PP     +   P     PT P      P++PP     P++PP     P++PP
Sbjct:   678 PPT----YKAKPTYKAKPTNPSTYKAKPSYPPTYKAKPSYPPTYKAKPSYPP 725

GO:0005576 "extracellular region" evidence=IDA

GENEDB_PFALCIPARUM|PF14_0194 PF14_0194 "spliceosome-associated protein, putative" [Plasmodium falciparum (taxid:5833)]

 Score = 316 (116.3 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 84/165 (50%), Positives = 88/165 (53%)

Query:   961 SNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPV--QNFNHTLPPMSNFNPTIP 1018
             SN  P +PP  N  P  PP  NF P LPP  N+ PT PP        TLPP  N  PT+P
Sbjct:   326 SNLPPNIPP--NLPPNFPP--NFPPNLPP--NLPPTLPPTLPPTLPPTLPP--NLPPTLP 377

Query:  1019 PV--QNFNSTLPPV--QNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNIN 1074
             P    N   TLPP    N  P LPP  NF PTLPP  NF PT+PP  NF PTLPP  N  
Sbjct:   378 PTLPPNLPPTLPPTLPPNLPPNLPP--NFPPTLPP--NFPPTLPP--NFPPTLPP--NFP 429

Query:  1075 PTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPP 1119
             P FPP       LPP  NF PTLPP  N  P FPP  NI P  PP
Sbjct:   430 PGFPP------NLPP--NFPPTLPP--NIPPGFPP--NIPPNLPP 462

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0008380 "RNA splicing" evidence=ISS

UNIPROTKB|Q8ILQ0 PF14_0194 "Spliceosome-associated protein, putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 316 (116.3 bits), Expect = 2.8e-25, P = 2.8e-25
 Identities = 84/165 (50%), Positives = 88/165 (53%)

Query:   961 SNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPV--QNFNHTLPPMSNFNPTIP 1018
             SN  P +PP  N  P  PP  NF P LPP  N+ PT PP        TLPP  N  PT+P
Sbjct:   326 SNLPPNIPP--NLPPNFPP--NFPPNLPP--NLPPTLPPTLPPTLPPTLPP--NLPPTLP 377

Query:  1019 PV--QNFNSTLPPV--QNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNIN 1074
             P    N   TLPP    N  P LPP  NF PTLPP  NF PT+PP  NF PTLPP  N  
Sbjct:   378 PTLPPNLPPTLPPTLPPNLPPNLPP--NFPPTLPP--NFPPTLPP--NFPPTLPP--NFP 429

Query:  1075 PTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPP 1119
             P FPP       LPP  NF PTLPP  N  P FPP  NI P  PP
Sbjct:   430 PGFPP------NLPP--NFPPTLPP--NIPPGFPP--NIPPNLPP 462

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0008380 "RNA splicing" evidence=ISS

TAIR|locus:4010713901 AT4G22485 "AT4G22485" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 9.6e-21, Sum P(3) = 9.6e-21
 Identities = 76/191 (39%), Positives = 88/191 (46%)

Query:   946 TLPPVPSFNPSFPTMS-NFNPTLPPMSNFNPTIPPKENFNPTLPP--VQNINPTFPPVQN 1002
             TLP  P   P  P  S    PTLPP  N  P  PP+    P  PP  +  + P  PP + 
Sbjct:   409 TLPNTPPGTP--PNQSPQIPPTLPP--NTPPETPPQTP--PNSPPETLPTLPPNTPP-EA 461

Query:  1003 FNHTLPPMSNFNPTIPP--VQNFNSTLPPVQNFNPTLPPVENFNPTLPPMS--NFNPTIP 1058
               +T PP S   PT+PP        TLPP  N  P  PP  N  P  PP +     PT+P
Sbjct:   462 LPNT-PPQSP--PTLPPNTPPQIPPTLPP--NTPPQTPP--NTPPETPPNTPPQTPPTVP 514

Query:  1059 PKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFP 1118
             P  N  P  PPV+   PT PP      TLPP S   PT PP  N +P+ PP K+  P  P
Sbjct:   515 P--NTPPVTPPVRP--PTTPPSPPPTTTLPPSS---PTSPP--NNSPSPPPPKSQPP--P 563

Query:  1119 PVQNFNPTFPP 1129
             P   F P  PP
Sbjct:   564 PPPRFQPPPPP 574

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006869 "lipid transport" evidence=IEA

TAIR|locus:4010713767 AT3G22142 "AT3G22142" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
 Identities = 106/470 (22%), Positives = 161/470 (34%)

Query:   680 PTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLP-PIITDRPLDNP--HLPNILTH---ST 733
             P+ P+  T    NP   T    PP+   P   P P +   P+  P   +P I T     +
Sbjct:   171 PSTPKPPTT---NPPPSTPQ--PPTHKPPPCTPTPPVASPPMATPPTQMPPIATPPIAKS 225

Query:   734 PGESPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPPIITDR----PLDNPHL 789
             P  +P    P +    +  I   +TP +     ++   P  +PPI T      P+ NP +
Sbjct:   226 PVATPPIATPPTATPPI-TIPPVATPPITTPPIAN--PPIIMPPIATPPVAAPPITNPPI 282

Query:   790 PNILTYSTPGESP---EPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEYHVESK 846
                   + P  +P   +P + T  +S+        TP        T+  +  P   V   
Sbjct:   283 SKPPVTTPPTTTPPIAKPPIATPPIST----PPAATPPAATPPITTLPPAKPP---VAIS 335

Query:   847 PTVTPIDLIITQ---STSPTERQ-TSSHITSTTLTKVSEYSSTXXXXXXXXXXXXKLSKD 902
             P VTP    I Q   +T PT     ++   +T  T  S  S+               S  
Sbjct:   336 PIVTPPVTPIAQPPVATPPTATPPVATPPIATPPTSKSPISTPPISESPVATPPTATSPI 395

Query:   903 LSFDFNPTLPPLQNIXXXXXXXXXXXXXXXXXXTLPPMPSFNLTLPPVPSFNPSFPTMSN 962
              +    P  PP+                     T PP+    +  PP  +   + P ++ 
Sbjct:   396 KTPP--PAKPPVATPPIAKSPIATPPTATPPVAT-PPIEKPPVATPPTTTPPTATPPVAK 452

Query:   963 FNPTLPPMSNFNPTIPPKENFNP-TLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQ 1021
                  PP++   PT  P  +  P + PPV       PP+       PP++     IPPV 
Sbjct:   453 PPVETPPIAT-PPTAKPPISTPPISKPPVATPPAATPPITTPTPVKPPVATPPLAIPPVA 511

Query:  1022 NFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTF-PPV 1080
                   PP        PP+   +P   P +   P   P     P + P     PT  PPV
Sbjct:   512 KPPVVTPPTATPPIATPPIAK-SPVATPPTATPPVATPPIAKPPVVTPPTTTPPTATPPV 570

Query:  1081 QNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPI 1130
                    PP++      PP+     +  PV       PP+    P  PP+
Sbjct:   571 AKPPVATPPIATPPTAKPPISTPPISKSPVATPPAATPPITTPPPAKPPV 620

GO:0005575 "cellular_component" evidence=ND

GO:0006869 "lipid transport" evidence=IEA

TAIR|locus:2038658 EPR1 "AT2G27380" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 4.5e-17, Sum P(3) = 4.5e-17
 Identities = 64/213 (30%), Positives = 95/213 (44%)

Query:   938 PPMPSFNLTLPPVPSFNPSFPTMS---NFNPTLPPMSNFNPTI-PPKENFNPT---LPPV 990
             PP P+++  + P P   P  PT S      P  PP   ++P + PP  +  PT    PPV
Sbjct:   394 PPTPTYSPPIKPPPLQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPV 453

Query:   991 QNINPTFPPVQNFNHTL--PPMSNFNPTI-PPVQNFNSTLPPVQNFNPTL--PPVENF-N 1044
             +      PP   ++  +  PP+    PT  PPVQ      PP   ++P +  PP++    
Sbjct:   454 KPPPVHKPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPTPTYSPPVKPPPIQKPPT 513

Query:  1045 PTLPPMSNFNPTIPPKENFNPTL--PPVQNI-NPTF-PPVQNFNHTLPPMSNFNPTL--P 1098
             PT  P     P  PP   ++P +  PPV     PT+ PP++      PP   ++P +  P
Sbjct:   514 PTYSPPIKPPPVKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPIHKPPTPTYSPPIKPP 573

Query:  1099 PVQNF-NPTF-PPVKNINPTFPPVQNFNPTFPP 1129
             PV     PT+ PP+K      PP   ++P   P
Sbjct:   574 PVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKP 606

GO:0005199 "structural constituent of cell wall" evidence=TAS

GO:0009827 "plant-type cell wall modification" evidence=TAS

GO:0009845 "seed germination" evidence=RCA;TAS

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2124142 AT4G18670 "AT4G18670" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
 Identities = 64/210 (30%), Positives = 92/210 (43%)

Query:   938 PPMPSFNLTLPPVPSFNPSFP-TMSNFNPTLPPMSNF------NPTIPPKENFNPTLPPV 990
             PP P+F+    P PS  P  P T S F P  PP          +P+ PP+     T PP 
Sbjct:   651 PPPPTFS----PSPSIPPPPPQTYSPFPPPPPPPPQTYYPPQPSPSQPPQSPIYGT-PPP 705

Query:   991 QNINPTFPPVQNFNHTLPPMSNF--NPTIPPVQNFNSTLP-PVQNF-NPTLPPVENFNP- 1045
               I P  P    F    PP   +  +P  PP  +++   P P  ++ +P  PP    +P 
Sbjct:   706 SPI-PYLPSPPQFASPPPPAPYYYSSPQPPPPPHYSLPPPTPTYHYISPPPPPTPIHSPP 764

Query:  1046 --TLPPMSNFNPTIPPKENFNPTLPP--VQNINPTFPPVQNFNHTLPPMS-NFNPTLPPV 1100
               + PP   ++P  PP  ++NP  PP       P  PPV  +N   PP + +++P  PPV
Sbjct:   765 PQSHPPCIEYSPPPPPTVHYNPPPPPSPAHYSPPPSPPVYYYNSPPPPPAVHYSPPPPPV 824

Query:  1101 -QNFNPTFPPVKNINPTFPPVQNFNPTFPP 1129
               +  P  PP+    P  PP+   +   PP
Sbjct:   825 IHHSQPPPPPIYE-GP-LPPIPGISYASPP 852

GO:0005199 "structural constituent of cell wall" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2147810 GASA14 "AT5G14920" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 76/204 (37%), Positives = 93/204 (45%)

Query:   936 TLP-PMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNIN 994
             TLP P P+   T PP P+  P  PT S   PTLP      PT  P     P  PP   + 
Sbjct:    37 TLPSPSPA---TKPPSPALKP--PTPSYKPPTLPTTPIKPPTTKP-----PVKPPTIPVT 86

Query:   995 PTFPPVQNFNHTLPPMS--NFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSN 1052
             P  PPV      LPP+    + P  P V+   S  PP   + P  P V+   PT  P+  
Sbjct:    87 PVKPPVSTPPIKLPPVQPPTYKPPTPTVKP-PSVQPPT--YKPPTPTVKP--PTTSPVKP 141

Query:  1053 FNPTIPPKENFNPTLPPVQNINPTF-PPVQNFNH--TLPPMSNFNPTLPPVQ--NFNPTF 1107
               PT PP ++     PPVQ   PT+ PP        T PP+     T PPVQ   +NP  
Sbjct:   142 --PTTPPVQS-----PPVQP--PTYKPPTSPVKPPTTTPPVKP-PTTTPPVQPPTYNPPT 191

Query:  1108 PPVKNINPTFPPVQNFNPTFPPIQ 1131
              PVK   PT PPV+   PT PP++
Sbjct:   192 TPVKP--PTAPPVKP--PTPPPVR 211

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5ZLK8 RCJMB04_5l6 "UPF0669 protein C6orf120 homolog" [Gallus gallus (taxid:9031)]

 Score = 156 (60.0 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
 Identities = 28/63 (44%), Positives = 42/63 (66%)

Query:   116 DADFYVSTSVEKPTYEPDTYDVQSASCGIDVVHIPESFKRPVHISVYGHPAAETSVYILD 175
             DAD YVS     P++  D Y++QS +CG D+VH+P  F+RPV I +YGHP+ + S + + 
Sbjct:    69 DADLYVSDMTLHPSF--DEYELQSVTCGQDIVHVPAHFRRPVGIGIYGHPSHQESEFEMK 126

Query:   176 VVH 178
             V +
Sbjct:   127 VYY 129

GO:0005576 "extracellular region" evidence=IEA

TAIR|locus:2028911 PERK12 "proline-rich extensin-like receptor kinase 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.7e-15, P = 6.7e-15
 Identities = 74/206 (35%), Positives = 102/206 (49%)

Query:   936 TLPP--MPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLP----P 989
             T PP   PS N  LPPV S  PS P  S+   + PP+S   P+ PP ++  P LP    P
Sbjct:    19 TAPPPETPSENSALPPVDSSPPSPPADSS---STPPLSE--PSTPPPDSQLPPLPSILPP 73

Query:   990 VQNINP----TFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNP 1045
             + +  P    + PPV +     PP SN +P+ PP  +     PP ++ +   PP ++   
Sbjct:    74 LTDSPPPPSDSSPPVDSTPSPPPPTSNESPS-PPEDSETPPAPPNESNDNNPPPSQDLQS 132

Query:  1046 TLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPP-VQNFN 1104
               PP S+ +P + P    NP  PP+Q+  P  PP  +  ++ PP S  +PT PP +Q   
Sbjct:   133 --PPPSSPSPNVGPT---NPESPPLQS--PPAPPASDPTNS-PPASPLDPTNPPPIQPSG 184

Query:  1105 P-TFPPVKNINPTFPPVQNFNPTFPP 1129
             P T PP    NP  PP   F PT PP
Sbjct:   185 PATSPPA---NPNAPP-SPF-PTVPP 205

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032502 "developmental process" evidence=IMP

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	1262
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-09
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	5e-08
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	2e-05
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	3e-05
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	1e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.002
pfam07223	357	pfam07223, DUF1421, Protein of unknown function (D	0.002

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 60.7 bits (147), Expect = 5e-09
 Identities = 107/487 (21%), Positives = 144/487 (29%), Gaps = 45/487 (9%)

Query: 683  PEVRTNEFLNPAALTTSSVPPSRDKPTS----LPPIITDRPLDNPHLPNILT-------- 730
             E R       A       PP  D P +     P I+ D P+  P  P +LT        
Sbjct: 2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEEL 2543

Query: 731  HSTPGESPEPYLPTSTLSSLGNIA--------RDSTPNVIAKEFSSRDKPTSLPPIITDR 782
             S     P P LP +   +  + +        R S P V ++       P S  P     
Sbjct: 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVD 2603

Query: 783  PLDNPHLPNILTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKEFNTIASSGLPEYH 842
               +P  P   +   P ++  P  P  + S   N      P  +                
Sbjct: 2604 DRGDPRGPAPPS-PLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRV- 2661

Query: 843  VESKPTVTPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTNFPNIPPIQNFPKLSKD 902
              S+P          Q++SP +R        T    V   +S   P  PP    P     
Sbjct: 2662 --SRPRRARRLGRAAQASSPPQRPRRRAARPT----VGSLTSLADPPPPPPTPEPAPHAL 2715

Query: 903  LSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSN 962
            +S    P  P       P       PP     P  P  P+     PP  +  P  P    
Sbjct: 2716 VSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPAR-PPTTA-GPPAPAPPA 2773

Query: 963  FNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQN 1022
                 PP     P +        +LP   +       V      LPP ++    +PP  +
Sbjct: 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS 2833

Query: 1023 FNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQN 1082
               T PP        PP     P+LP   +  P    +       P  +   P  PPV+ 
Sbjct: 2834 AQPTAPP--------PPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRR 2885

Query: 1083 FNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPN 1142
                    S  +  LPP Q   P  PP     P  PP     P  PP     P  PP P 
Sbjct: 2886 LARPAVSRSTESFALPPDQ---PERPP----QPQAPPPPQPQPQPPPPPQPQPPPPPPPR 2938

Query: 1143 FNPTLPP 1149
              P L P
Sbjct: 2939 PQPPLAP 2945

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 57.6 bits (139), Expect = 5e-08
 Identities = 96/496 (19%), Positives = 143/496 (28%), Gaps = 62/496 (12%)

Query: 678  TFPTLPEVRTNEFLNPAALTTSSVPPSRDKPTSLPPIITDRPLDNPHL-PNILTHSTPGE 736
             FP  P  R      PA         +   P    P   D P     L P IL     GE
Sbjct: 2473 LFPGAPVYR-----RPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGE 2527

Query: 737  SPEPYLPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSLPP----------IITDRPLDN 786
               P + T  +  L  +A D           + D P  LPP          +   RP   
Sbjct: 2528 PVHPRMLT-WIRGLEELASDD----------AGDPPPPLPPAAPPAAPDRSVPPPRPAPR 2576

Query: 787  PHLPNILTYST-PGESPEPHLPTSTLSSLGNIARDLTPNVI---AKEFNTIASSGLPEYH 842
            P  P + + +  P   P+   P + +   G+      P+ +       +    S  P  +
Sbjct: 2577 PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN 2636

Query: 843  VESKPTVTPIDLIITQSTSPTERQTSSHITSTTLTKVSEYSSTNFPNIPPIQNFPKLSKD 902
                     +         P   + S    +  L + ++ SS      PP +   + ++ 
Sbjct: 2637 EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASS------PPQRPRRRAAR- 2689

Query: 903  LSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSN 962
                  PT+  L ++  PP   P   P    +  +   P     LPP P+          
Sbjct: 2690 ------PTVGSLTSLADPPP--PPPTPEPAPHALVSATP-----LPPGPAAARQASPALP 2736

Query: 963  FNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQN 1022
              P  P +    P  P          P     P  P         PP     P +  +  
Sbjct: 2737 AAPAPPAVPA-GPATPGGPARPAR--PPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSE 2793

Query: 1023 FNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQN 1082
               +LP   +       V      LPP ++    +PP  +  PT PP     P   P   
Sbjct: 2794 SRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP-----PPPGPPPP 2848

Query: 1083 FNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPN 1142
               +LP   +  P     +      P  K   P  PPV+            +  LPP   
Sbjct: 2849 ---SLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQP 2905

Query: 1143 FNPTLPPIHINPTFPP 1158
              P  P     P   P
Sbjct: 2906 ERPPQPQAPPPPQPQP 2921

Length = 3151

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 48.2 bits (115), Expect = 2e-05
 Identities = 25/136 (18%), Positives = 35/136 (25%), Gaps = 4/136 (2%)

Query: 978  PPKENFNPTLPPVQN-INPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLP-PVQNFNP 1035
            P  +   P     Q    P                +  PT  P  N  +T   P     P
Sbjct: 51   PSPQAPPPVAQLPQPLPQPPPTQALQALPAGDQQQHNTPTGSPAANPPATFALPAGPAGP 110

Query: 1036 TL--PPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNF 1093
            T+   P + +   +P M   NP   P +         Q       P      +    +  
Sbjct: 111  TIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRYGAPASGQLPSQQQSAQK 170

Query: 1094 NPTLPPVQNFNPTFPP 1109
            N      Q  N   PP
Sbjct: 171  NDESQLQQQPNGETPP 186

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 48.2 bits (115), Expect = 3e-05
 Identities = 28/155 (18%), Positives = 34/155 (21%), Gaps = 1/155 (0%)

Query: 998  PPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTI 1057
                      P         P    F    PP Q      PP  +     P      P+ 
Sbjct: 166  RQQAPQLPQPPQQVLPQGMPPRQAAFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQ 225

Query: 1058 PPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTF 1117
             P +   P   P Q      P     +  +PP     P            PP +N     
Sbjct: 226  APAQPPLPPQLPQQPPPLQQPQFPGLSQQMPPPPPQPPQQQQQPPQPQAQPPPQNQPTPH 285

Query: 1118 P-PVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIH 1151
            P   Q  N   PP Q                 P  
Sbjct: 286  PGLPQGQNAPLPPPQQPQLLPLVQQPQGQQRGPQF 320

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 45.5 bits (108), Expect = 1e-04
 Identities = 25/144 (17%), Positives = 34/144 (23%), Gaps = 9/144 (6%)

Query: 936  TLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINP 995
              P  PS     P      P             P  +      P  +     PP     P
Sbjct: 46   EFPWDPSPQAPPPVAQLPQPLPQPPPTQALQALPAGDQQQHNTPTGS-PAANPPATFALP 104

Query: 996  T--------FPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTL 1047
                       P Q +   +P M   NP   P+          Q       P     P+ 
Sbjct: 105  AGPAGPTIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRYGAPASGQLPSQ 164

Query: 1048 PPMSNFNPTIPPKENFNPTLPPVQ 1071
               +  N     ++  N   PP Q
Sbjct: 165  QQSAQKNDESQLQQQPNGETPPQQ 188

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 42.6 bits (100), Expect = 0.002
 Identities = 63/340 (18%), Positives = 94/340 (27%), Gaps = 49/340 (14%)

Query: 893  IQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPP-------------MSNFYPTLPP 939
            I+   +L+ D + D  P LPP      P + + S PP                  P  PP
Sbjct: 2537 IRGLEELASDDAGDPPPPLPPAA---PPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPP 2593

Query: 940  MPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPP 999
                    P  P  +   P        LPP ++     PP  +     P         PP
Sbjct: 2594 QS----ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649

Query: 1000 VQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPP 1059
             +  +   P   +      P +          +  P  P      PT+  +++     PP
Sbjct: 2650 ERPRDDPAPGRVS-----RPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPP 2704

Query: 1060 KENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFP--PVKNINPTF 1117
                 P    + +  P  P         P          P     P  P  P     P  
Sbjct: 2705 PPTPEPAPHALVSATPLPPGPAAARQASPA-----LPAAPAPPAVPAGPATPGGPARPAR 2759

Query: 1118 PPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDLSVSS 1177
            PP        PP     P  P  P      PP             ++  S+++       
Sbjct: 2760 PPT----TAGPP----APAPPAAP---AAGPP----RRLTRPAVASLSESRESLPSPWDP 2804

Query: 1178 AFPSNSNWLNNMTPTLPSLSLTTPTVFPLPSRTPTSPPAT 1217
            A P  +  +      LP  +     + P  S  PT+PP  
Sbjct: 2805 ADPPAA--VLAPAAALPPAASPAGPLPPPTSAQPTAPPPP 2842

Length = 3151

>gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421)

 Score = 41.5 bits (97), Expect = 0.002
 Identities = 45/264 (17%), Positives = 74/264 (28%), Gaps = 27/264 (10%)

Query: 924  NPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENF 983
             P+   ++       P+   N  LPP P+     P         PP   +   +PP++  
Sbjct: 50   PPAPEQVAKHELADAPLQQVNAALPPAPAPQSPQPDQQ-QQSQAPPSHQYPSQLPPQQVQ 108

Query: 984  NPTLPPVQNINPTFPPVQNFNHT---LPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPV 1040
            +    P     P +PP           P      P     Q      PP Q      PP 
Sbjct: 109  SVPQQPTPQQEPYYPPPSQPQPPPAQQPQAQQPQPPPQVPQQQQYQSPPQQPQYQQNPPP 168

Query: 1041 ENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPV 1100
            +    + P +S   P   P +    + PP + +  +      ++   P    + P  P  
Sbjct: 169  Q--AQSAPQVSGLYPEESPYQ--PQSYPPNEPLPSSMAMQPPYSGAPPSQQFYGPPQPSP 224

Query: 1101 QNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKK 1160
              +           P   P   F     P  +            P+        ++ P  
Sbjct: 225  YMYG---------GPGGRPNSGFPSGQQPPPSQGQEGYGYSGPPPSKGNHGSVASYAP-- 273

Query: 1161 NFNVISSQQNFDLSVSSAFPSNSN 1184
                    Q    S S+A+PS   
Sbjct: 274  --------QGSSQSYSTAYPSLPA 289

This family represents a conserved region approximately 350 residues long within a number of plant proteins of unknown function. Length = 357

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1262
PF07271	279	Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR0	97.86
PF07271	279	Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR0	97.55
PLN03086	567	PRLI-interacting factor K; Provisional	91.19

>PF07271 Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR009896 This family consists of several Mycoplasma species specific Cytadhesin P32 and P30 proteins

Probab=97.86  E-value=0.00014  Score=77.32  Aligned_cols=9  Identities=33%  Similarity=0.770  Sum_probs=4.6

Q ss_pred             ccCCCCccc
Q psy17877        834 ASSGLPEYH  842 (1262)
Q Consensus       834 assglpeyh  842 (1262)
                      +.-|+|-|.
T Consensus        88 l~ig~p~~k   96 (279)
T PF07271_consen   88 LAIGIPIYK   96 (279)
T ss_pred             Hhhcchhhh
Confidence            344555554

P30 has been found to be membrane associated and localised on the tip organelle. It is thought that it is important in cytadherence and virulence [].; GO: 0007157 heterophilic cell-cell adhesion, 0009405 pathogenesis, 0016021 integral to membrane

>PF07271 Cytadhesin_P30: Cytadhesin P30/P32; InterPro: IPR009896 This family consists of several Mycoplasma species specific Cytadhesin P32 and P30 proteins

Probab=97.55  E-value=0.00077  Score=71.91  Aligned_cols=31  Identities=26%  Similarity=0.494  Sum_probs=12.5

Q ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCCCcccCC
Q psy17877        994 NPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNS 1025 (1262)
Q Consensus       994 NPN~PPR~amNPNlPSR~amNPNiPSR~amNP 1025 (1262)
                      +|+.++|+++|-..+.+..|++++. |+.||+
T Consensus       179 ~p~mt~RPg~~~~~p~~pg~~p~~~-RPG~~~  209 (279)
T PF07271_consen  179 NPNMTSRPGFNQFTPGMPGMPPNTQ-RPGFTP  209 (279)
T ss_pred             CCCCCCCCCCCcCCCCCCCCCCCCC-CCCCCC
Confidence            4444444444333333344433333 444444

P30 has been found to be membrane associated and localised on the tip organelle. It is thought that it is important in cytadherence and virulence [].; GO: 0007157 heterophilic cell-cell adhesion, 0009405 pathogenesis, 0016021 integral to membrane

>PLN03086 PRLI-interacting factor K; Provisional

Probab=91.19  E-value=1.1  Score=52.09  Aligned_cols=65  Identities=26%  Similarity=0.344  Sum_probs=39.6

Q ss_pred             CCCCcceEeeccc-CCCCcCCCCcccccccccCceEEcCCCC----CCccEEEEecCCCCccceEEEEEEeecC
Q psy17877        113 RPSDADFYVSTSV-EKPTYEPDTYDVQSASCGIDVVHIPESF----KRPVHISVYGHPAAETSVYILDVVHREE  181 (1262)
Q Consensus       113 ~~gDADlYVS~s~-~kPtyEpD~Yd~QSaTCG~DvV~IP~sf----kRPV~IgVYGHPs~e~S~y~L~Vv~~e~  181 (1262)
                      +.+|.|||||..- ..|+-  |.|.+.|..=|..++.|-..=    .-=.+|||||-..  .-.|.|.|...+.
T Consensus       319 ~~~~~dlfvS~~~~~~p~~--~~h~~ss~~~~~k~l~~~~~~~~l~~~~~~i~v~~~~~--~~~~~l~~~~~~~  388 (567)
T PLN03086        319 SGGDTDLYVSKHPLVFPTR--HQHEWSSHDMGSKVLILKSKDASLSSGTYSIGVYGFKG--TTKYQVSVSVQDN  388 (567)
T ss_pred             CCCceEEEEcccccccccc--cccccccCccccceeEecCCCcccccceEEEEEeccCC--ceeEEEEEEeecc
Confidence            5679999999721 12333  455555555566665553211    2334689999877  4589998765433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1262
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	4e-12
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	1e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	3e-11
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	7e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	4e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	1e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	2e-04
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	3e-04
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	6e-04

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 70.5 bits (172), Expect = 4e-12
 Identities = 60/279 (21%), Positives = 121/279 (43%), Gaps = 22/279 (7%)

Query: 883  SSTNFPNIPPIQNFPKLSKDLSFDFNPTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPS 942
            + T +   P + +    S D +  F+P +                   S +     P  +
Sbjct: 1482 AGTPYERSPMVDSGFVGSPDAA-AFSPLVQGGSEGREGFGDYGLLGAASPYKGVQSPGYT 1540

Query: 943  FNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPV-Q 1001
               +    P +  + P+ S  +P       + P+ P   +++PT P     +P++ P   
Sbjct: 1541 SPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSP---SYSPTSPSYSPTSPSYSPTSP 1597

Query: 1002 NFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKE 1061
            +++ T P  S  +P+  P     S   P  +++PT P   +++PT P  S  +P+  P  
Sbjct: 1598 SYSPTSPSYSATSPSYSPTSPSYSPTSP--SYSPTSP---SYSPTSPSYSPTSPSYSPTS 1652

Query: 1062 -NFNPTLPPVQNINPTFPPV-QNFNHTLPPMS----NFNPTLPPVQNFNPTFPP-VKNIN 1114
             +++PT P     +P++ P   +++ T P  S    +++PT P     +P++ P   + +
Sbjct: 1653 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712

Query: 1115 PTFPPVQNFNPTFPPI-QNFNPT----LPPVPNFNPTLP 1148
            PT P     +P++ P   +++PT     P  P+++PT P
Sbjct: 1713 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 48.5 bits (115), Expect = 1e-05
 Identities = 62/287 (21%), Positives = 108/287 (37%), Gaps = 73/287 (25%)

Query: 934  YPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPPVQNI 993
            Y   P + S  +  P   +F+P     S                P    +     P    
Sbjct: 1486 YERSPMVDSGFVGSPDAAAFSPLVQGGSEGREGFGDYGLLGAASP----YKGVQSPGYTS 1541

Query: 994  NPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNF 1053
              +      +  T P  S  +P       +  + P   +++PT P   +++PT P   ++
Sbjct: 1542 PFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSP---SYSPTSP---SYSPTSP---SY 1592

Query: 1054 NPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNI 1113
            +PT P   +++PT P     +P++ P         P   ++PT P   +++PT P     
Sbjct: 1593 SPTSP---SYSPTSPSYSATSPSYSPTSPSYSPTSPS--YSPTSP---SYSPTSP----- 1639

Query: 1114 NPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDL 1173
                    +++PT P   +++PT    P+++PT P    +PT P                
Sbjct: 1640 --------SYSPTSP---SYSPT---SPSYSPTSP--SYSPTSP---------------- 1667

Query: 1174 SVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPL-PSRTPTSPPATFT 1219
                          + +PT PS S T+P+  P  PS +PTSP  + T
Sbjct: 1668 --------------SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 67.0 bits (163), Expect = 3e-11
 Identities = 58/313 (18%), Positives = 113/313 (36%), Gaps = 33/313 (10%)

Query: 909  PTLPPLQNINLPPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLP 968
             +L                      Y     + + +L +     F+P   + SN +    
Sbjct: 1448 ESLVKYMPEQKITEIEDGQDGGVTPYSNESGLVNADLDVKDELMFSPLVDSGSN-DAMAG 1506

Query: 969  PMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLP 1028
              + +      +             +P F               F+PT P    ++ T P
Sbjct: 1507 GFTAYGGADYGEATSPFGAYGEAPTSPGFG---------VSSPGFSPTSP---TYSPTSP 1554

Query: 1029 PVQNFNPTLPPVENFNPTLPPMSNFNPT-IPPKENFNPTLPPVQNINPTFPPV-QNFNHT 1086
                ++PT P   +++PT P  S  +P+  P   +++PT P     +P++ P   +++ T
Sbjct: 1555 ---AYSPTSP---SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1608

Query: 1087 LPPMSNFNPTLPPVQ-NFNPTFPPVKNINPTFPPVQNFNPTFPPIQN-FNPTLPPVPNFN 1144
             P  S  +P+  P   +++PT P     +P++ P    +P++ P    ++PT P     +
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT---SPSYSPTSPSYSPTSPAYSPTS 1665

Query: 1145 PTLPPIHINPTFPPKKNFNVISSQQNFDLSVSSAFPSNSNWLNNMTPTLPSLSLTTPTVF 1204
            P+  P   +P++ P       +S      S     P+ S    + +PT P  S  +P   
Sbjct: 1666 PSYSP--TSPSYSPTSPSYSPTSPSYSPTS-----PNYSPTSPSYSPTSPGYSPGSPAYS 1718

Query: 1205 PLPSRTPTSPPAT 1217
            P       +    
Sbjct: 1719 PKQDEQKHNENEN 1731

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 66.3 bits (161), Expect = 7e-11
 Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 31/246 (12%)

Query: 920  PPSFNPSFPPMSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMS-NFNPTIP 978
               +  +  P   +    P  P F       P F+P+ PT S  +P   P S +++PT P
Sbjct: 1513 GADYGEATSPFGAYGEA-PTSPGFG---VSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSP 1568

Query: 979  PKENFNPTLPPVQNINPTFPPVQNFNH-TLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTL 1037
               +++PT P     +P++ P       T P  S  +P+  P     S   P  +++PT 
Sbjct: 1569 ---SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP--SYSPTS 1623

Query: 1038 PPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTL 1097
            P   +++PT P  S  +P+  P         P    +PT P         P   +++PT 
Sbjct: 1624 P---SYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPAYS------PTSPSYSPTS 1672

Query: 1098 PPVQNFNPTFPPVKNINPTFPPVQNFNPTFPPIQNFNPT----LPPVPNFNPTLPPIHIN 1153
            P     +P++ P        P   N++PT P   +++PT     P  P ++P       N
Sbjct: 1673 PSYSPTSPSYSPTSPSY--SPTSPNYSPTSP---SYSPTSPGYSPGSPAYSPKQDEQKHN 1727

Query: 1154 PTFPPK 1159
                 +
Sbjct: 1728 ENENSR 1733

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 6e-10
 Identities = 92/637 (14%), Positives = 182/637 (28%), Gaps = 167/637 (26%)

Query: 352 TATEEWPYTLPKLTTARPVFNEVGIKKDVPPPGLDWPYTLPELTTPRPVLNGEIVNKVLP 411
             T E  Y    +     VF +     +      D          P+ +L+ E ++ ++ 
Sbjct: 9   FETGEHQYQYKDIL---SVFED-AFVDN-----FDCKDVQDM---PKSILSKEEIDHII- 55

Query: 412 QVEVDVPNSFTTRKSPVDDLIIREIAPIVDAIPSKIPKFEMGITSRTHSPIFNTDIIDKN 471
                         S         +   + +   ++ +             F  +++  N
Sbjct: 56  -------------MSKDAVSGTLRLFWTLLSKQEEMVQ------------KFVEEVLRIN 90

Query: 472 LSPIVDSISKIATEHPTTTKTIPYQETTPRPFSGAPSYTPTD-SNPHVIPTEIKTIFK-- 528
              ++  I     +   +  T  Y E   R ++    +   + S       +++      
Sbjct: 91  YKFLMSPIKTEQRQ--PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY-LKLRQALLEL 147

Query: 529 -----------GGPTVSEAATTGTSIL-----NGDSIAKSISNN---LNAFAKSDS---- 565
                       G        +G + +         +   +      LN     +S    
Sbjct: 148 RPAKNVLIDGVLG--------SGKTWVALDVCLSYKVQCKMDFKIFWLN-LKNCNSPETV 198

Query: 566 VTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLN--IMTSDLEKSLKSVV----- 618
           + +   L     P      +    S+       +  +L   + +   E  L  +V     
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKSKPYENCL--LVLLNVQ 254

Query: 619 -SSVMNELN-TSNILPTTTPRNSFYNVINSLDKTNDNARFDDE----LTSRQ-RDIHSKI 671
            +   N  N +  IL TT  R     V + L          D     LT  + + +  K 
Sbjct: 255 NAKAWNAFNLSCKILLTT--RFK--QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 672 KNIGEITFPTLPEVRTNEFLNPAALTTSSVPPS-RDKPTSLPPIITDRPLDNPHLPNILT 730
            +      P   EV T    NP  L  S +  S RD   +       + ++   L  I+ 
Sbjct: 311 LDCRPQDLP--REVLT---TNPRRL--SIIAESIRDGLATWDNW---KHVNCDKLTTIIE 360

Query: 731 HS----TPGESPEPY-----------LPTSTLSSLGNIARDSTPNVIAKEFSSRDKPTSL 775
            S     P E  + +           +PT  LS +      S   V+  +        SL
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY----SL 416

Query: 776 PPIITDRPLDNPHLPNI-LTYSTPGESPEPHLPTSTLSSLGNIARDLTPNVIAKE----- 829
             +          +P+I L      E+ E  L  S +    NI +    + +        
Sbjct: 417 --VEKQPKESTISIPSIYLELKVKLEN-EYALHRSIVDHY-NIPKTFDSDDLIPPYLDQY 472

Query: 830 -FNTIASSGLPEYHVES-----KPTVTP---IDL------IITQSTSPTERQTSSHITST 874
            ++ I       +H+++     + T+     +D       I   ST+     +  +    
Sbjct: 473 FYSHIG------HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN---- 522

Query: 875 TLTKVSEYSSTNFPNIPPIQNFPKLSKDLSFDFNPTL 911
           TL ++  Y      N P    + +L   +  DF P +
Sbjct: 523 TLQQLKFYKPYICDNDP---KYERLVNAI-LDFLPKI 555

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 47.1 bits (111), Expect = 4e-05
 Identities = 39/235 (16%), Positives = 55/235 (23%), Gaps = 10/235 (4%)

Query: 994  NPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPPMSNF 1053
                   QN      P     P  P      S           +P +       P     
Sbjct: 11   QAQLQYGQNATPLQQPAQFMPPQDPAAAGM-SYGQMGMPPQGAVPSMGQQQFLTPAQEQL 69

Query: 1054 NPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTLPPVQNFNPTFPPVKNI 1113
            +  I        T           P V    +  P +     T    Q      P     
Sbjct: 70   HQQIDQ-----ATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQP 124

Query: 1114 NPTFPPVQNFNPTFPPIQNFNPTLPPVPNFNPTLPPIHINPTFPPKKNFNVISSQQNFDL 1173
            +              PI       PP+ +     PP+ I P      +    +S      
Sbjct: 125  SAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNASPDYIRS 184

Query: 1174 SVSSAFPSNSNWLNNMTPTLPSLSLTTPTVFPLPSRTPTSPPATFTLISTTQRDR 1228
            ++ +A P NS+ L      LP   L       L       P     LI   +R R
Sbjct: 185  TL-NAVPKNSSLLKKS--KLP-FGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRCR 235

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 45.2 bits (106), Expect = 1e-04
 Identities = 27/194 (13%), Positives = 52/194 (26%), Gaps = 13/194 (6%)

Query: 930  MSNFYPTLPPMPSFNLTLPPVPSFNPSFPTMSNFNPTLPPMSNFNPTIPPKENFNPTLPP 989
            MS+    + P           P   P+   M   +P    MS     +PP       +P 
Sbjct: 1    MSHHKKRVYPQAQLQYGQNATPLQQPA-QFMPPQDPAAAGMSYGQMGMPP----QGAVPS 55

Query: 990  VQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNFNSTLPPVQNFNPTLPPVENFNPTLPP 1049
            +       P  +  +  +   +        + + +    P+ + N  + P        P 
Sbjct: 56   MGQQQFLTPAQEQLHQQIDQAT------TSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPL 109

Query: 1050 MSNFNPTIPPKENFNPTLPPVQNINPTFP-PVQNFNHTLPPMSNFNPTLPP-VQNFNPTF 1107
                 P   P                    P+       PP+++     PP V       
Sbjct: 110  QQQQQPMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERML 169

Query: 1108 PPVKNINPTFPPVQ 1121
             P +  N +   ++
Sbjct: 170  VPSELSNASPDYIR 183

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 45.2 bits (106), Expect = 2e-04
 Identities = 25/178 (14%), Positives = 46/178 (25%), Gaps = 7/178 (3%)

Query: 964  NPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNFNHTLPPMSNFNPTIPPVQNF 1023
               L    N  P   P +   P  P    ++     +       P M       P  +  
Sbjct: 11   QAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAV-PSMGQQQFLTPAQEQL 69

Query: 1024 NSTLPPVQNFNPTLPPVENFNPTLPPMSNFNPTIPPKENFNPTLPPVQNINPTFPPVQNF 1083
            +  +         +    +  P + P +   P +P       T    Q      P     
Sbjct: 70   HQQIDQATTSMNDMHL--HNVPLVDPNAYMQPQVPV---QMGTPLQQQQQPMAAPAYGQP 124

Query: 1084 NHTLPPMSNFNPTLPPVQNFNPTFPPVKNINPTFPP-VQNFNPTFPPIQNFNPTLPPV 1140
            +  +         L P+       PP+ ++    PP V        P +  N +   +
Sbjct: 125  SAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNASPDYI 182

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 43.5 bits (102), Expect = 3e-04
 Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 2/35 (5%)

Query: 218 ACPVGRWGANCTSKCDCGE--INGNKCHHLTGTCI 250
           AC +  +G  C  +C   E   +   C      C 
Sbjct: 232 ACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCS 266

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423

 Score = 42.8 bits (100), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 219 CPVGRWGANCTSKCDCGEINGNKCHHLTGTCI 250
           C   +WG  C   C     N   CH  TG CI
Sbjct: 189 CEAQKWGPECNHLCTACM-NNGVCHEDTGECI 219

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00